BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780180|ref|YP_003064593.1| S-adenosylmethionine:tRNA
ribosyltransferase-isomerase [Candidatus Liberibacter asiaticus str.
psy62]
(360 letters)
Database: nr
13,984,884 sequences; 4,792,584,752 total letters
Searching..................................................done
Results from round 1
>gi|254780180|ref|YP_003064593.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Liberibacter asiaticus str. psy62]
gi|254039857|gb|ACT56653.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Liberibacter asiaticus str. psy62]
Length = 360
Score = 745 bits (1923), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/360 (100%), Positives = 360/360 (100%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV
Sbjct: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ
Sbjct: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY
Sbjct: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM
Sbjct: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG
Sbjct: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR
Sbjct: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
>gi|315122778|ref|YP_004063267.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Liberibacter solanacearum CLso-ZC1]
gi|313496180|gb|ADR52779.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Liberibacter solanacearum CLso-ZC1]
Length = 359
Score = 602 bits (1553), Expect = e-170, Method: Compositional matrix adjust.
Identities = 285/359 (79%), Positives = 321/359 (89%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
MMVKEFDF LP SRIALRPV PRDSARLMVV+PNLSC +ISD+ V DLP FLNSNDAIV
Sbjct: 1 MMVKEFDFHLPSSRIALRPVSPRDSARLMVVYPNLSCSQMISDYSVRDLPIFLNSNDAIV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI AQL G R N E ISCTLHMR+S NSWS Y RP K+I++GD ++FFSQ
Sbjct: 61 FNNTKVIAAQLRGRRLRRTNDSEHWISCTLHMRISSNSWSAYVRPGKIIRQGDTIYFFSQ 120
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DGQS+LEA VI+K +TGEILLVF +SG EL+RQI+L+GT+PLPPYIA+KRPID RDYVDY
Sbjct: 121 DGQSKLEANVIEKRDTGEILLVFPLSGTELDRQIALIGTMPLPPYIAKKRPIDERDYVDY 180
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QTTYA IQGSVAAPTAGLHFTS+LLS+L+S+G+ VYF+TLHVGAGTFMPV+VEDTDDHIM
Sbjct: 181 QTTYASIQGSVAAPTAGLHFTSDLLSKLVSMGVAVYFITLHVGAGTFMPVRVEDTDDHIM 240
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSEIGFIDA TAQ LN+VK RGGRIV+VGTTSLRLLETATTEDGII P SG+TNIFITPG
Sbjct: 241 HSEIGFIDAQTAQDLNAVKLRGGRIVAVGTTSLRLLETATTEDGIIMPLSGYTNIFITPG 300
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRFRAVD+L+SNFHLPKSTLLMLVSAFCG+EETK MYQHAI+++YRFYSYGD SL+F+K
Sbjct: 301 YRFRAVDVLLSNFHLPKSTLLMLVSAFCGVEETKTMYQHAIANSYRFYSYGDASLIFKK 359
>gi|325293064|ref|YP_004278928.1| S-adenosylmethionine tRNA ribosyltransferase [Agrobacterium sp.
H13-3]
gi|325060917|gb|ADY64608.1| S-adenosylmethionine tRNA ribosyltransferase [Agrobacterium sp.
H13-3]
Length = 374
Score = 445 bits (1144), Expect = e-123, Method: Compositional matrix adjust.
Identities = 224/363 (61%), Positives = 267/363 (73%), Gaps = 8/363 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP + IALRP PRDSARL+VV PN + D +VSDL +FL DA+V
Sbjct: 15 MRVDLFDFDLPEANIALRPANPRDSARLLVVDPNADH---MEDRIVSDLTSFLKPGDALV 71
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF-FS 119
FN+T+VI AQL GVR E +S TLHMR + W +ARP K IK+GD + F +
Sbjct: 72 FNDTRVIPAQLEGVRLRE-GAPETAVSATLHMRADQSRWKAFARPGKRIKQGDRIRFGYE 130
Query: 120 QD---GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
+D G + LEATV +K GEI L+F +SG L+ I+ VG IPLPPYIA KRP DA+D
Sbjct: 131 RDNACGLAHLEATVEEKGEEGEITLLFDVSGPVLDEAIASVGHIPLPPYIAAKRPEDAQD 190
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT YA+ +G+VAAPTAGLHFT +L + L GI+ +FVTLHVGAGTF+PVK +DTD
Sbjct: 191 QTDYQTIYAREKGAVAAPTAGLHFTPDLFAALDEAGIERHFVTLHVGAGTFLPVKADDTD 250
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
DH MH EIG + TA LN+VK+RGGRIVSVGTTSLRL+E+AT E+G+I PWSG T IF
Sbjct: 251 DHKMHFEIGHVSQETAAKLNAVKARGGRIVSVGTTSLRLIESATDENGVIQPWSGATGIF 310
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFRAVDILM+NFHLPKSTL MLVSAFCG+E + Y HAI YRFYSYGD+SLL
Sbjct: 311 ITPGYRFRAVDILMTNFHLPKSTLFMLVSAFCGLETMRAAYAHAIETGYRFYSYGDSSLL 370
Query: 357 FQK 359
F+K
Sbjct: 371 FRK 373
>gi|222148799|ref|YP_002549756.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Agrobacterium vitis S4]
gi|254764261|sp|B9JWX0|QUEA_AGRVS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|221735785|gb|ACM36748.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Agrobacterium vitis S4]
Length = 352
Score = 442 bits (1136), Expect = e-122, Method: Compositional matrix adjust.
Identities = 221/359 (61%), Positives = 265/359 (73%), Gaps = 9/359 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP IALRP PRD AR ++V P+ S L++ D V +LP+FL + DA+V
Sbjct: 1 MRVDLFDFDLPDENIALRPANPRDQARFLIVRPDGS--LMLEDRRVFELPSFLRAGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL GVR R +SCTLHMRV+ N W +ARP K IK+GD++ F
Sbjct: 59 FNDTKVIPAQLEGVRIREGAER-TPVSCTLHMRVAANRWKAFARPGKRIKQGDVIDF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DG L A V +K GEI L F+ SG +L+R I+ VG IPLPPYIA KRP D++D DY
Sbjct: 115 DG---LSANVAEKGEAGEIDLEFAASGPDLDRAIAGVGHIPLPPYIAAKRPEDSQDRTDY 171
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +G+VAAPTAGLHFT L L GI+ +FVTLHVGAGTF+PVK +DTDDH M
Sbjct: 172 QTIYAREEGAVAAPTAGLHFTPALFEALDKAGIERHFVTLHVGAGTFLPVKADDTDDHKM 231
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H EIG + A TA+ALN+VK+RGGRIVSVGTTSLRLLE+A +EDG + PWS T IFITPG
Sbjct: 232 HQEIGHVSAETAEALNAVKARGGRIVSVGTTSLRLLESAASEDGRLLPWSDATGIFITPG 291
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRF+AVD+LM+NFHLPKSTL MLVSAF G+E + Y HAI YRFYSYGD+SLLF+K
Sbjct: 292 YRFKAVDVLMTNFHLPKSTLFMLVSAFAGLETMRAAYAHAIETGYRFYSYGDSSLLFRK 350
>gi|327193336|gb|EGE60240.1| S-adenosylmethionine: tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis) protein [Rhizobium etli CNPAF512]
Length = 366
Score = 441 bits (1134), Expect = e-122, Method: Compositional matrix adjust.
Identities = 219/366 (59%), Positives = 265/366 (72%), Gaps = 9/366 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPN---LSCPLVISDHLVSDLPAFLNSND 57
M V FDFDLP RIALRP PRDSARL+VV+P+ + +SDH V DLP+FL + D
Sbjct: 1 MRVDLFDFDLPDERIALRPAEPRDSARLLVVNPHAESVHAESALSDHHVYDLPSFLRAGD 60
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
A+VFN+TKVI AQL G+R +++S TLHMR+ PN W +A+P K IK+GD +
Sbjct: 61 ALVFNDTKVIPAQLEGIRH-RDGAGGQQVSATLHMRIGPNRWKAFAKPGKRIKEGDRI-A 118
Query: 118 FSQDGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
F G+S L+ATV +K GE+ L F ++G LE I+ VG IPLPPYIA KRP D
Sbjct: 119 FGHSGESCFLGSLDATVEEKGEAGEVTLAFDLTGPALEEAIAAVGHIPLPPYIAAKRPED 178
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
RD DYQT YA+ +G+VAAPTAGLHFT +L + L GI+ +FVTLHVGAGTF+PVK +
Sbjct: 179 ERDRADYQTIYAREEGAVAAPTAGLHFTPDLFAALDKAGIERHFVTLHVGAGTFLPVKAD 238
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
DTDDH MH E G++ A A LN+VK+RGGRIV VGTTSLRLLE+A EDG I PW+G T
Sbjct: 239 DTDDHKMHLESGYVSAEIAARLNAVKARGGRIVCVGTTSLRLLESAAGEDGKIKPWAGAT 298
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFITPGYRF+AVD+LM+NFHLP+STL MLVSAF G E Y+HAIS YRFYSYGD
Sbjct: 299 GIFITPGYRFKAVDMLMTNFHLPRSTLFMLVSAFSGFETMHAAYEHAISTGYRFYSYGDA 358
Query: 354 SLLFQK 359
SLLF+K
Sbjct: 359 SLLFRK 364
>gi|159184871|ref|NP_354665.2| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Agrobacterium tumefaciens str. C58]
gi|22096020|sp|Q8UES7|QUEA_AGRT5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|159140152|gb|AAK87450.2| S-adenosylmethionine tRNA ribosyltransferase-isomerase
[Agrobacterium tumefaciens str. C58]
Length = 366
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 224/369 (60%), Positives = 266/369 (72%), Gaps = 14/369 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP IALRP PRDSARL+VV PN + + DH V DLP+FL DA+V
Sbjct: 1 MRVDLFDFDLPEENIALRPANPRDSARLLVVDPNEN---RMEDHRVFDLPSFLRPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF-FS 119
FN+T+VI AQL GVR E +S TLHMR + W +ARP K IK+GD + F +
Sbjct: 58 FNDTRVIPAQLEGVRLRE-GAPETAVSATLHMRADQSRWKAFARPGKRIKEGDRIRFGYD 116
Query: 120 QD---------GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKR 170
+D G + LEATV +K GEI L+F ISG L+ I+ VG IPLPPYIA KR
Sbjct: 117 RDTVNSSSGACGLAHLEATVEEKGEEGEITLLFDISGPVLDEAIASVGHIPLPPYIAAKR 176
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
P D +D DYQT YA+ +G+VAAPTAGLHFT +L L S GI+ +FVTLHVGAGTF+PV
Sbjct: 177 PEDQQDQTDYQTIYAREKGAVAAPTAGLHFTPDLFEALDSAGIERHFVTLHVGAGTFLPV 236
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWS 290
K +DTDDH MH EIG++ TA LN+VK+RGGRIV VGTTSLRL+E+A TEDG I+PWS
Sbjct: 237 KSDDTDDHKMHFEIGYVSQETADRLNAVKARGGRIVCVGTTSLRLIESAATEDGTIHPWS 296
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
T IFITPGYRFRAVD+LM+NFHLPKSTL MLVSAFCG+E + Y+HAI YRFYSY
Sbjct: 297 DATGIFITPGYRFRAVDMLMTNFHLPKSTLFMLVSAFCGLETMRDAYRHAIETGYRFYSY 356
Query: 351 GDTSLLFQK 359
GD+SLLF+K
Sbjct: 357 GDSSLLFRK 365
>gi|227822132|ref|YP_002826103.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sinorhizobium fredii NGR234]
gi|227341132|gb|ACP25350.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sinorhizobium fredii NGR234]
Length = 366
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 221/367 (60%), Positives = 268/367 (73%), Gaps = 16/367 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP + IALRP PRDSAR++VV P L SD V DLP+FL+ DA+V
Sbjct: 6 MRVDLFDFDLPETSIALRPASPRDSARMLVVRPQREPAL--SDFGVLDLPSFLSPGDALV 63
Query: 61 FNNTKVITAQLNGVRFCHINRREK----EISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
FN+TKVI AQL G+R RR + ++S TLHMRV+P+ W +ARP++ +K GD +
Sbjct: 64 FNDTKVIPAQLEGIR-----RRGEDVATQVSLTLHMRVAPDRWKAFARPARRLKPGDRIS 118
Query: 117 FFSQDGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
F G + L+ATV +K GE+ L F +SG L+ I VG IPLPPYIA KR
Sbjct: 119 F-GHGGNACLLGSLDATVEEKGEAGEVTLRFELSGPVLDEAIMSVGHIPLPPYIASKRSE 177
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
DARD DYQT YA+ +G+VAAPTAGLHFT L +L GI+ +FVTLHVGAGTF+PVK
Sbjct: 178 DARDRADYQTVYAREEGAVAAPTAGLHFTDRLFGKLDEAGIERHFVTLHVGAGTFLPVKA 237
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+DTDDH+MH EIG +DA TA+ LN+V++RGGRIV VGTTSLRL+E+A TEDG I+PWSG
Sbjct: 238 DDTDDHVMHEEIGHVDAVTAEKLNAVRARGGRIVCVGTTSLRLIESAATEDGKIHPWSGT 297
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T IFITPGYRFRAVD+LM+NFHLPKSTL MLVSAF G+E + Y HAI+ YRFYSYGD
Sbjct: 298 TGIFITPGYRFRAVDMLMTNFHLPKSTLFMLVSAFAGLETMRGAYTHAIAAGYRFYSYGD 357
Query: 353 TSLLFQK 359
SLLF+K
Sbjct: 358 ASLLFRK 364
>gi|190891762|ref|YP_001978304.1| S-adenosylmethionine: tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis) protein [Rhizobium etli CIAT 652]
gi|238692548|sp|B3PZR1|QUEA_RHIE6 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|190697041|gb|ACE91126.1| S-adenosylmethionine: tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis) protein [Rhizobium etli CIAT 652]
Length = 373
Score = 434 bits (1117), Expect = e-120, Method: Compositional matrix adjust.
Identities = 218/373 (58%), Positives = 267/373 (71%), Gaps = 16/373 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNL-------SCP---LVISDHLVSDLP 50
M V FDFDLP RIALRP PRDSARL+VV+P+ S P +SDH V DLP
Sbjct: 1 MRVDLFDFDLPDERIALRPAEPRDSARLLVVNPHAESGPHAESVPHAESALSDHHVYDLP 60
Query: 51 AFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIK 110
+FL + DA+VFN+TKVI AQL G+R +++S TLHMR+ P+ W +A+P K IK
Sbjct: 61 SFLRAGDALVFNDTKVIPAQLEGIRH-RDGAGGQQVSATLHMRIGPSRWKAFAKPGKRIK 119
Query: 111 KGDILHFFSQDGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYI 166
+GD + F G+S L+ATV +K GE+ L F ++G L+ I+ VG IPLPPYI
Sbjct: 120 EGDRI-AFGHSGESCFLGALDATVEEKGEAGEVTLAFDLTGPALDEAIAAVGHIPLPPYI 178
Query: 167 ARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGT 226
A KRP D RD DYQT YA+ +G+VAAPTAGLHFT +L + L GI+ +FVTLHVGAGT
Sbjct: 179 AAKRPEDERDRADYQTIYAREEGAVAAPTAGLHFTPDLFAALDKAGIERHFVTLHVGAGT 238
Query: 227 FMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII 286
F+PVK +DTDDH MH E G++ A A LN+VK+RGGRIV VGTTSLRL+E+A EDG I
Sbjct: 239 FLPVKADDTDDHKMHLESGYVSAEIAARLNAVKARGGRIVCVGTTSLRLIESAAGEDGKI 298
Query: 287 NPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYR 346
PW+G T IFITPGYRF+AVD+LM+NFHLP+STL MLVSAF G E + Y+HAIS YR
Sbjct: 299 KPWAGATGIFITPGYRFKAVDMLMTNFHLPRSTLFMLVSAFSGFETMRAAYEHAISTGYR 358
Query: 347 FYSYGDTSLLFQK 359
FYSYGD SLLF+K
Sbjct: 359 FYSYGDASLLFRK 371
>gi|86357735|ref|YP_469627.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhizobium
etli CFN 42]
gi|123511943|sp|Q2K8D6|QUEA_RHIEC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|86281837|gb|ABC90900.1| S-adenosylmethionine: tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis)protein [Rhizobium etli CFN 42]
Length = 361
Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust.
Identities = 216/363 (59%), Positives = 259/363 (71%), Gaps = 8/363 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRP PRDSARL+VV P+ L SDH V DLP+FL + DA+V
Sbjct: 1 MRVDLFDFDLPDERIALRPAEPRDSARLLVVDPDAESAL--SDHHVCDLPSFLRAGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R +++S TLHMR+ P+ W +A+P K IK+GD + F
Sbjct: 59 FNDTKVIPAQLEGIRH-RDGAGGQQVSATLHMRIGPSRWKAFAKPGKRIKEGDRIAF-GH 116
Query: 121 DGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
G+S L+ATV +K GE+ L F +SG L+ I+ VG IPLPPYIA KRP D RD
Sbjct: 117 SGESCMIGSLDATVEEKGEAGEVTLAFDLSGPVLDEAIAAVGHIPLPPYIAAKRPEDERD 176
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT YA+ +G+VAAPTAGLHFT L L GI+ +FVTLHVGAGTF+PVK +DTD
Sbjct: 177 RADYQTIYAREEGAVAAPTAGLHFTPALFEALDKAGIERHFVTLHVGAGTFLPVKADDTD 236
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
DH MH E G++ A LN+VK+RGGRIV VGTTSLRL+E+A E G I PW+G T IF
Sbjct: 237 DHKMHLESGYVSGEIAAGLNAVKARGGRIVCVGTTSLRLIESAAGESGEIKPWAGATGIF 296
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRF+AVD+LM+NFHLP+STL MLVSAF G E Y+HAIS YRFYSYGD SLL
Sbjct: 297 ITPGYRFKAVDMLMTNFHLPRSTLFMLVSAFSGFETMHAAYKHAISTGYRFYSYGDASLL 356
Query: 357 FQK 359
F+K
Sbjct: 357 FRK 359
>gi|222085994|ref|YP_002544526.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Agrobacterium radiobacter K84]
gi|254764260|sp|B9JFA8|QUEA_AGRRK RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|221723442|gb|ACM26598.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Agrobacterium radiobacter K84]
Length = 360
Score = 431 bits (1109), Expect = e-119, Method: Compositional matrix adjust.
Identities = 215/366 (58%), Positives = 263/366 (71%), Gaps = 14/366 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRP PRDSARL+VV PN +V+SD + DL ++L DAIV
Sbjct: 1 MRVDLFDFDLPDERIALRPAEPRDSARLLVVDPN--AEMVLSDRQIRDLSSYLRPGDAIV 58
Query: 61 FNNTKVITAQLNGVRFCHINRRE----KEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
FN+TKVI AQL G+R RE +++S TLHMR +P+ W +A+P K IK GD +
Sbjct: 59 FNDTKVIPAQLEGIR-----HREGAPGQQVSATLHMRAAPDRWKAFAKPGKRIKIGDRIQ 113
Query: 117 FFSQD---GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
F + L+A V +K GEI L F +SG L+ I+ VG IPLPPYIA KRP D
Sbjct: 114 FGHGENVCALGALDAVVEEKGEGGEITLRFDLSGPALDEAIAAVGHIPLPPYIAAKRPED 173
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
RD DYQT YA+ +G+VAAPTAGLHFT +L + L ++G++ +FVTLHVGAGTF+PVK +
Sbjct: 174 ERDRADYQTIYAREEGAVAAPTAGLHFTPSLFATLDAMGVERHFVTLHVGAGTFLPVKAD 233
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
DT+DH MH EIG +DA TA+ LN+VK+RGGRIV VGTTSLRLLE+A EDG I PWSG T
Sbjct: 234 DTEDHKMHFEIGHVDAATAEKLNAVKARGGRIVCVGTTSLRLLESAAAEDGTIKPWSGAT 293
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFITPGYRF+ VD+LM+NFHLP+STL MLVSAF G++ + Y HAI YRFYSYGD
Sbjct: 294 GIFITPGYRFKTVDLLMTNFHLPRSTLFMLVSAFAGLDTMRAAYTHAIETGYRFYSYGDG 353
Query: 354 SLLFQK 359
SLL +K
Sbjct: 354 SLLHRK 359
>gi|241204662|ref|YP_002975758.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|240858552|gb|ACS56219.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 361
Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust.
Identities = 215/363 (59%), Positives = 257/363 (70%), Gaps = 8/363 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRP PRDSARL+VV PN L SDH V DL +FL + DA+V
Sbjct: 1 MRVDLFDFDLPDERIALRPAEPRDSARLLVVDPNAESHL--SDHRVGDLTSFLRAGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R +++S TLHMR PN W +A+P K IK+GD + F
Sbjct: 59 FNDTKVIPAQLEGIRH-RDGAGGQQVSATLHMRTGPNRWKAFAKPGKRIKQGDRISF-GH 116
Query: 121 DGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
G+S L+A V +K GE+ L+F +SG L+ I+ VG IPLPPYIA KRP D RD
Sbjct: 117 SGESCFLGSLDAAVEEKGEAGEVTLLFDLSGPALDEAIAAVGHIPLPPYIAAKRPEDERD 176
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT YA+ +G+VAAPTAGLHFT L L GI+ +FVTLHVGAGTF+PVK +DTD
Sbjct: 177 RADYQTIYAREEGAVAAPTAGLHFTPALFEALDKAGIERHFVTLHVGAGTFLPVKADDTD 236
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
DH MH E G++ A A LN+V+ RGGRIV VGTTSLRL+E+A E G I PW+G T IF
Sbjct: 237 DHKMHLESGYVSAEIAARLNAVRERGGRIVCVGTTSLRLVESAAEEGGEIMPWAGATGIF 296
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRF+AVD+LM+NFHLP+STL MLV+AF G E Y+HAIS YRFYSYGD SLL
Sbjct: 297 ITPGYRFKAVDMLMTNFHLPRSTLFMLVAAFAGFETMHAAYKHAISTGYRFYSYGDASLL 356
Query: 357 FQK 359
F+K
Sbjct: 357 FRK 359
>gi|116252158|ref|YP_767996.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhizobium
leguminosarum bv. viciae 3841]
gi|166216743|sp|Q1MGM3|QUEA_RHIL3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|115256806|emb|CAK07896.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhizobium leguminosarum bv. viciae 3841]
Length = 361
Score = 428 bits (1100), Expect = e-118, Method: Compositional matrix adjust.
Identities = 215/363 (59%), Positives = 258/363 (71%), Gaps = 8/363 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRP PRDSARL+V+ PN L SDH V DL +FL + DA+V
Sbjct: 1 MRVDLFDFDLPDERIALRPAEPRDSARLLVIDPNAENSL--SDHRVGDLTSFLRAGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R +++S TLHMR SP+ W +A+P K IK+GD + F
Sbjct: 59 FNDTKVIPAQLEGIRH-RDGAGGQQVSATLHMRTSPSRWKAFAKPGKRIKQGDRISF-GH 116
Query: 121 DGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
G+S L+ATV +K GE+ L+F +SG L+ I+ VG IPLPPYIA KRP D RD
Sbjct: 117 SGESCFLGSLDATVEEKGEAGEVTLLFDLSGPALDEAIAAVGHIPLPPYIAAKRPEDERD 176
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT YA+ +G+VAAPTAGLHFT L L GI+ +FVTLHVGAGTF+PVK +DT
Sbjct: 177 RADYQTIYAREEGAVAAPTAGLHFTPGLFEALDRAGIERHFVTLHVGAGTFLPVKADDTA 236
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
DH MH E G++ A A LN+V+ RGGRIV VGTTSLRL+E+A E G I PW+G T IF
Sbjct: 237 DHKMHLESGYVSAEIAARLNAVRERGGRIVCVGTTSLRLIESAAEESGEIMPWAGATGIF 296
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRF+AVD+LM+NFHLP+STL MLVSAF G E Y+HAIS YRFYSYGD SLL
Sbjct: 297 ITPGYRFKAVDMLMTNFHLPRSTLFMLVSAFAGFETMHAAYKHAISTGYRFYSYGDASLL 356
Query: 357 FQK 359
F+K
Sbjct: 357 FRK 359
>gi|307317196|ref|ZP_07596637.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Sinorhizobium meliloti AK83]
gi|306897284|gb|EFN28029.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Sinorhizobium meliloti AK83]
Length = 360
Score = 428 bits (1100), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/366 (59%), Positives = 262/366 (71%), Gaps = 14/366 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP + IALRP PRDSAR++VV P+ P V+ D V DLP+FL DA+V
Sbjct: 1 MRVDLFDFDLPENSIALRPASPRDSARMLVVRPD-GAP-VLEDRGVLDLPSFLRPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREK---EISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
FN+TKVI AQL GVR+ R E +S TLHMRV+P+ W +ARP++ +K GD + F
Sbjct: 59 FNDTKVIPAQLEGVRY----RGEDISTPVSLTLHMRVAPSRWKAFARPARRLKPGDRISF 114
Query: 118 FSQDGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
G + LEA V +K + GE+ L F +SG L+ I VG IPLPPYIA KR D
Sbjct: 115 -GHGGNACLLGSLEAVVEEKGDAGEVTLRFDLSGPSLDEAIMAVGHIPLPPYIASKRADD 173
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
RD DYQT YA+ +G+VAAPTAGLHFT L ++L GI+ YFVTLHVGAGTF+PVK +
Sbjct: 174 ERDRTDYQTVYAREEGAVAAPTAGLHFTDRLFAKLDEGGIERYFVTLHVGAGTFLPVKAD 233
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
DT DH+MH EIG +D TA LN+V+ RGGRIV VGTTSLRL+E+A EDG I PWSG T
Sbjct: 234 DTADHVMHEEIGHVDPVTAAKLNAVRERGGRIVCVGTTSLRLIESAAAEDGNIRPWSGAT 293
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFITPGYRFRAVD+LM+NFHLPKSTL MLVSAF G+E Y HAI+ YRFYSYGD+
Sbjct: 294 GIFITPGYRFRAVDMLMTNFHLPKSTLFMLVSAFAGLETMHAAYAHAIATGYRFYSYGDS 353
Query: 354 SLLFQK 359
SLLF+K
Sbjct: 354 SLLFRK 359
>gi|15965338|ref|NP_385691.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sinorhizobium meliloti 1021]
gi|21263893|sp|Q92PY5|QUEA_RHIME RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|15074518|emb|CAC46164.1| Probable S-adenosylmethionine:tRNA
ribosyltransferase-isomerase(queuosine biosynthesis
protein QueA) [Sinorhizobium meliloti 1021]
Length = 360
Score = 427 bits (1099), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/366 (59%), Positives = 262/366 (71%), Gaps = 14/366 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP + IALRP PRDSAR++VV P+ P V+ D V DLP+FL DA+V
Sbjct: 1 MRVDLFDFDLPENSIALRPASPRDSARMLVVRPD-GAP-VLEDRGVLDLPSFLRPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREK---EISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
FN+TKVI AQL GVR+ R E +S TLHMRV+P+ W +ARP++ +K GD + F
Sbjct: 59 FNDTKVIPAQLEGVRY----RGEDISTPVSLTLHMRVAPSRWKAFARPARRLKPGDRISF 114
Query: 118 FSQDGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
G + LEA V +K + GE+ L F +SG L+ I VG IPLPPYIA KR D
Sbjct: 115 -GHGGSACLLGSLEAVVEEKGDAGEVTLRFDLSGPSLDEAIMAVGHIPLPPYIASKRADD 173
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
RD DYQT YA+ +G+VAAPTAGLHFT L ++L GI+ YFVTLHVGAGTF+PVK +
Sbjct: 174 ERDRTDYQTVYAREEGAVAAPTAGLHFTDRLFAKLDEGGIERYFVTLHVGAGTFLPVKAD 233
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
DT DH+MH EIG +D TA LN+V+ RGGRIV VGTTSLRL+E+A EDG I PWSG T
Sbjct: 234 DTADHVMHEEIGHVDPVTAAKLNAVRERGGRIVCVGTTSLRLIESAAAEDGNIRPWSGAT 293
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFITPGYRFRAVD+LM+NFHLPKSTL MLVSAF G+E Y HAI+ YRFYSYGD+
Sbjct: 294 GIFITPGYRFRAVDMLMTNFHLPKSTLFMLVSAFAGLETMHAAYAHAIATGYRFYSYGDS 353
Query: 354 SLLFQK 359
SLLF+K
Sbjct: 354 SLLFRK 359
>gi|307312710|ref|ZP_07592341.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Sinorhizobium meliloti BL225C]
gi|306899435|gb|EFN30067.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Sinorhizobium meliloti BL225C]
Length = 360
Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust.
Identities = 219/366 (59%), Positives = 261/366 (71%), Gaps = 14/366 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP + IALRP PRDSAR++VV P+ P V D V DLP+FL DA+V
Sbjct: 1 MRVDLFDFDLPENSIALRPASPRDSARMLVVRPD-GAP-VFEDRGVLDLPSFLRPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREK---EISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
FN+TKVI AQL GVR+ R E +S TLHMRV+P+ W +ARP++ +K GD + F
Sbjct: 59 FNDTKVIPAQLEGVRY----RGEDISTPVSLTLHMRVAPSRWKAFARPARRLKPGDRISF 114
Query: 118 FSQDGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
G + LEA V +K + GE+ L F +SG L+ I VG IPLPPYIA KR D
Sbjct: 115 -GHGGSACLLGSLEAVVEEKGDAGEVTLRFDLSGPSLDEAIMAVGHIPLPPYIASKRADD 173
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
RD DYQT YA+ +G+VAAPTAGLHFT L ++L GI+ YFVTLHVGAGTF+PVK +
Sbjct: 174 ERDRTDYQTVYAREEGAVAAPTAGLHFTDRLFAKLDEGGIERYFVTLHVGAGTFLPVKAD 233
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
DT DH+MH EIG +D TA LN+V+ RGGRIV VGTTSLRL+E+A EDG I PWSG T
Sbjct: 234 DTADHVMHEEIGHVDPVTAAKLNAVRERGGRIVCVGTTSLRLIESAAAEDGNIRPWSGAT 293
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFITPGYRFRAVD+LM+NFHLPKSTL MLVSAF G+E Y HAI+ YRFYSYGD+
Sbjct: 294 GIFITPGYRFRAVDMLMTNFHLPKSTLFMLVSAFAGLETMHAAYAHAIATGYRFYSYGDS 353
Query: 354 SLLFQK 359
SLLF+K
Sbjct: 354 SLLFRK 359
>gi|150396485|ref|YP_001326952.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sinorhizobium medicae WSM419]
gi|166218742|sp|A6U8Y7|QUEA_SINMW RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|150028000|gb|ABR60117.1| Queuosine biosynthesis protein [Sinorhizobium medicae WSM419]
Length = 360
Score = 424 bits (1091), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/365 (58%), Positives = 261/365 (71%), Gaps = 12/365 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP +ALRP PRDSAR++VV P V+ D V DLP+FL DA+V
Sbjct: 1 MRVDLFDFDLPEDSVALRPASPRDSARMLVVRPGGEP--VLEDRGVLDLPSFLRQGDALV 58
Query: 61 FNNTKVITAQLNGVRF--CHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
FN+TKVI AQL GVR+ HI+ +S TLHMRV+P+ W +ARP++ +K GD + F
Sbjct: 59 FNDTKVIPAQLEGVRYRGEHIS---TPVSLTLHMRVAPDRWKAFARPARRLKPGDRVSF- 114
Query: 119 SQDGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
G + L+A V +K + GE+ L F +SG L+ I VG IPLPPYIA KR DA
Sbjct: 115 GHGGNACLLGSLDAMVEEKGDAGEVTLRFDLSGPSLDEAIMSVGHIPLPPYIASKRADDA 174
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
RD DYQT YA+ +G+VAAPTAGLHFT L + L GI+ +FVTLHVGAGTF+PVK +D
Sbjct: 175 RDRTDYQTVYAREEGAVAAPTAGLHFTDRLFAMLDEAGIERHFVTLHVGAGTFLPVKADD 234
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
TDDH+MH EIG +DA TA LN+V+ RGGR+V VGTTSLRL+E+A EDG I+ WSG T
Sbjct: 235 TDDHVMHEEIGHVDAVTAAKLNAVRERGGRVVCVGTTSLRLVESAAAEDGTIHAWSGATG 294
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFITPGYRFRA +LM+NFHLPKSTL MLVSAF G+E + Y HAI+ YRFYSYGD+S
Sbjct: 295 IFITPGYRFRAAHMLMTNFHLPKSTLFMLVSAFAGLETMRDAYAHAIATGYRFYSYGDSS 354
Query: 355 LLFQK 359
LLF+K
Sbjct: 355 LLFRK 359
>gi|209549347|ref|YP_002281264.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|226713846|sp|B5ZPR8|QUEA_RHILW RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|209535103|gb|ACI55038.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Rhizobium
leguminosarum bv. trifolii WSM2304]
Length = 379
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 219/379 (57%), Positives = 260/379 (68%), Gaps = 22/379 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNL-------SCP---------LVISDH 44
M V FDFDLP RIALRP PRDSARL+VV+P+ S P SDH
Sbjct: 1 MRVDLFDFDLPDERIALRPAEPRDSARLLVVNPHAESRPHAESVPHAESRPHAESAFSDH 60
Query: 45 LVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYAR 104
V DLP+FL + DA+VFN+TKVI AQL G+R +++S TLHMRV P+ W +A+
Sbjct: 61 RVGDLPSFLRAGDALVFNDTKVIPAQLEGIRH-RDGAGGQQVSATLHMRVGPSRWKAFAK 119
Query: 105 PSKVIKKGDILHFFSQDGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTI 160
P K IK+GD + F G+S L+ATV +K GE+ L F +SG L+ I+ VG I
Sbjct: 120 PGKRIKEGDRI-AFGHSGESCLLGSLDATVEEKGEAGEVTLAFDLSGPALDEAIAAVGHI 178
Query: 161 PLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTL 220
PLPPYIA KRP D RD DYQT YA+ +G+VAAPTAGLHFT L L GI+ +FVTL
Sbjct: 179 PLPPYIAAKRPEDERDRADYQTIYAREEGAVAAPTAGLHFTPALFEALDRAGIERHFVTL 238
Query: 221 HVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT 280
HVGAGTF+PVK +DT DH MH E G + A TA LN+VK+RGGRIV VGTTSLRL+E+A
Sbjct: 239 HVGAGTFLPVKADDTADHKMHLESGTVSAETAARLNAVKARGGRIVCVGTTSLRLIESAA 298
Query: 281 TEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHA 340
E G I WSG T IFITPGYRF+AVD+LM+NFHLP+STL MLVSAF G E Y+HA
Sbjct: 299 EESGEIRGWSGATGIFITPGYRFKAVDMLMTNFHLPRSTLFMLVSAFSGFETMHAAYKHA 358
Query: 341 ISHAYRFYSYGDTSLLFQK 359
IS YRFYSYGD SLLF+K
Sbjct: 359 ISTGYRFYSYGDASLLFRK 377
>gi|254719159|ref|ZP_05180970.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
sp. 83/13]
gi|265984153|ref|ZP_06096888.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
sp. 83/13]
gi|306838150|ref|ZP_07471006.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
sp. NF 2653]
gi|264662745|gb|EEZ33006.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
sp. 83/13]
gi|306406740|gb|EFM62963.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
sp. NF 2653]
Length = 363
Score = 418 bits (1074), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/360 (58%), Positives = 257/360 (71%), Gaps = 11/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRPV PRD A+L+ V P D V DLP L DA+V
Sbjct: 1 MRVDLFDFDLPEERIALRPVEPRDHAKLLHVRPGQP----FEDRHVYDLPDLLQPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R N ++S TLHMRV P+ W + RP+K +K+GD + F
Sbjct: 57 FNDTKVIPAQLEGMRERTGNI--SQVSATLHMRVGPDRWKAFLRPAKRVKEGDRIRF-GH 113
Query: 121 DGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
G S L+ATV +K + GE LLVF +SG L+ I+ VG IPLPPYIA KRP D RD
Sbjct: 114 SGTSCFLGTLDATVAEKGDAGEALLVFDLSGAVLDEAIAAVGHIPLPPYIASKRPEDERD 173
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT YA+ +G+VAAPTAGLHFT +LL ++ + GI+ +FVTLHVGAGTF+PVK +DT
Sbjct: 174 RKDYQTVYAREEGAVAAPTAGLHFTPDLLEKIKARGIEEHFVTLHVGAGTFLPVKADDTG 233
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
DH MH+EIG + TA ALN+V RGGRI+ VGTTSLRL+E+AT EDGI+ PWSG T+IF
Sbjct: 234 DHKMHAEIGHVSQRTASALNAVHERGGRIICVGTTSLRLIESATGEDGIVRPWSGATDIF 293
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFRAVD+LM+NFHLP+STL MLVSAF G++ Y +AI+ YRFYSYGD SLL
Sbjct: 294 ITPGYRFRAVDLLMTNFHLPRSTLFMLVSAFSGLDTMHAAYNYAIADGYRFYSYGDASLL 353
>gi|17987172|ref|NP_539806.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
melitensis bv. 1 str. 16M]
gi|23501970|ref|NP_698097.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
suis 1330]
gi|62290007|ref|YP_221800.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 1 str. 9-941]
gi|82699935|ref|YP_414509.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
melitensis biovar Abortus 2308]
gi|148560477|ref|YP_001259016.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ovis ATCC 25840]
gi|161619043|ref|YP_001592930.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
canis ATCC 23365]
gi|163843359|ref|YP_001627763.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
suis ATCC 23445]
gi|189024248|ref|YP_001935016.1| Queuosine biosynthesis protein [Brucella abortus S19]
gi|237815515|ref|ZP_04594512.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus str. 2308 A]
gi|254689322|ref|ZP_05152576.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 6 str. 870]
gi|254697454|ref|ZP_05159282.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 2 str. 86/8/59]
gi|254701839|ref|ZP_05163667.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
suis bv. 5 str. 513]
gi|254704384|ref|ZP_05166212.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
suis bv. 3 str. 686]
gi|254706720|ref|ZP_05168548.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
pinnipedialis M163/99/10]
gi|254710173|ref|ZP_05171984.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
pinnipedialis B2/94]
gi|254714171|ref|ZP_05175982.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti M644/93/1]
gi|254717606|ref|ZP_05179417.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti M13/05/1]
gi|254730352|ref|ZP_05188930.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 4 str. 292]
gi|256031667|ref|ZP_05445281.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
pinnipedialis M292/94/1]
gi|256044752|ref|ZP_05447656.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
melitensis bv. 1 str. Rev.1]
gi|256061179|ref|ZP_05451331.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
neotomae 5K33]
gi|256113652|ref|ZP_05454463.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
melitensis bv. 3 str. Ether]
gi|256159818|ref|ZP_05457555.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti M490/95/1]
gi|256255069|ref|ZP_05460605.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti B1/94]
gi|256257569|ref|ZP_05463105.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 9 str. C68]
gi|256369519|ref|YP_003107029.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
microti CCM 4915]
gi|260546562|ref|ZP_05822301.1| queuosine biosynthesis protein [Brucella abortus NCTC 8038]
gi|260565646|ref|ZP_05836130.1| queuosine biosynthesis protein [Brucella melitensis bv. 1 str. 16M]
gi|260566370|ref|ZP_05836840.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
suis bv. 4 str. 40]
gi|260754835|ref|ZP_05867183.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 6 str. 870]
gi|260758052|ref|ZP_05870400.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 4 str. 292]
gi|260761877|ref|ZP_05874220.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 2 str. 86/8/59]
gi|260883847|ref|ZP_05895461.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 9 str. C68]
gi|261219439|ref|ZP_05933720.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti M13/05/1]
gi|261222259|ref|ZP_05936540.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti B1/94]
gi|261314184|ref|ZP_05953381.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
pinnipedialis M163/99/10]
gi|261317727|ref|ZP_05956924.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
pinnipedialis B2/94]
gi|261321935|ref|ZP_05961132.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti M644/93/1]
gi|261325182|ref|ZP_05964379.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
neotomae 5K33]
gi|261752398|ref|ZP_05996107.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
suis bv. 5 str. 513]
gi|261755058|ref|ZP_05998767.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
suis bv. 3 str. 686]
gi|265988758|ref|ZP_06101315.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
pinnipedialis M292/94/1]
gi|265991173|ref|ZP_06103730.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
melitensis bv. 1 str. Rev.1]
gi|265995009|ref|ZP_06107566.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
melitensis bv. 3 str. Ether]
gi|265998224|ref|ZP_06110781.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti M490/95/1]
gi|294852432|ref|ZP_06793105.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
sp. NVSL 07-0026]
gi|297248409|ref|ZP_06932127.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 5 str. B3196]
gi|54038975|sp|P65949|QUEA_BRUSU RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|54041779|sp|P65948|QUEA_BRUME RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|75496776|sp|Q57D45|QUEA_BRUAB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|91207414|sp|Q2YPY7|QUEA_BRUA2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|166216704|sp|A5VQL9|QUEA_BRUO2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|189038511|sp|A9M5A4|QUEA_BRUC2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|189038512|sp|B0CGP2|QUEA_BRUSI RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|238689369|sp|B2S5U5|QUEA_BRUA1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|17982839|gb|AAL52070.1| s-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
melitensis bv. 1 str. 16M]
gi|23347918|gb|AAN30012.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
suis 1330]
gi|62196139|gb|AAX74439.1| QueA, S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Brucella abortus bv. 1 str. 9-941]
gi|82616036|emb|CAJ11072.1| Queuosine biosynthesis protein [Brucella melitensis biovar Abortus
2308]
gi|148371734|gb|ABQ61713.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ovis ATCC 25840]
gi|161335854|gb|ABX62159.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
canis ATCC 23365]
gi|163674082|gb|ABY38193.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
suis ATCC 23445]
gi|189019820|gb|ACD72542.1| Queuosine biosynthesis protein [Brucella abortus S19]
gi|237788813|gb|EEP63024.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus str. 2308 A]
gi|255999681|gb|ACU48080.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
microti CCM 4915]
gi|260095612|gb|EEW79489.1| queuosine biosynthesis protein [Brucella abortus NCTC 8038]
gi|260151714|gb|EEW86808.1| queuosine biosynthesis protein [Brucella melitensis bv. 1 str. 16M]
gi|260155888|gb|EEW90968.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
suis bv. 4 str. 40]
gi|260668370|gb|EEX55310.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 4 str. 292]
gi|260672309|gb|EEX59130.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 2 str. 86/8/59]
gi|260674943|gb|EEX61764.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 6 str. 870]
gi|260873375|gb|EEX80444.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 9 str. C68]
gi|260920843|gb|EEX87496.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti B1/94]
gi|260924528|gb|EEX91096.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti M13/05/1]
gi|261294625|gb|EEX98121.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti M644/93/1]
gi|261296950|gb|EEY00447.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
pinnipedialis B2/94]
gi|261301162|gb|EEY04659.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
neotomae 5K33]
gi|261303210|gb|EEY06707.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
pinnipedialis M163/99/10]
gi|261742151|gb|EEY30077.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
suis bv. 5 str. 513]
gi|261744811|gb|EEY32737.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
suis bv. 3 str. 686]
gi|262552692|gb|EEZ08682.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti M490/95/1]
gi|262766122|gb|EEZ11911.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
melitensis bv. 3 str. Ether]
gi|263001957|gb|EEZ14532.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
melitensis bv. 1 str. Rev.1]
gi|264660955|gb|EEZ31216.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
pinnipedialis M292/94/1]
gi|294821021|gb|EFG38020.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
sp. NVSL 07-0026]
gi|297175578|gb|EFH34925.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 5 str. B3196]
Length = 363
Score = 417 bits (1073), Expect = e-115, Method: Compositional matrix adjust.
Identities = 211/360 (58%), Positives = 258/360 (71%), Gaps = 11/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRPV PRD A+L+ V P D V DLP L DA+V
Sbjct: 1 MRVDLFDFDLPEERIALRPVEPRDHAKLLHVRPGEP----FEDRHVYDLPDLLQPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R N ++S TLHMRV P+ W + RP+K +K+GD + F
Sbjct: 57 FNDTKVIPAQLEGMRERTGNI--SQVSATLHMRVGPDRWKAFLRPAKRVKEGDRIRF-GH 113
Query: 121 DGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
G S L+ATV +K ++GE LLVF +SG L+ I+ VG IPLPPYIA KRP D RD
Sbjct: 114 SGTSCFLGTLDATVAEKGDSGEALLVFDLSGAVLDEAIAAVGHIPLPPYIASKRPEDERD 173
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT YA+ +G+VAAPTAGLHFT +LL ++ + GI+ +FVTLHVGAGTF+PVK +DT
Sbjct: 174 RKDYQTVYAREEGAVAAPTAGLHFTPDLLEKIKARGIEEHFVTLHVGAGTFLPVKADDTG 233
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
DH MH+EIG + TA ALN+V RGGRI+ VGTTSLRL+E+AT EDG++ PWSG T+IF
Sbjct: 234 DHKMHAEIGHVSQRTASALNAVHERGGRIICVGTTSLRLIESATGEDGVVRPWSGATDIF 293
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFRAVD+LM+NFHLP+STL MLVSAF G++ Y +AI+ YRFYSYGD SLL
Sbjct: 294 ITPGYRFRAVDLLMTNFHLPRSTLFMLVSAFSGLDTMHAAYNYAIADGYRFYSYGDASLL 353
>gi|110633758|ref|YP_673966.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Mesorhizobium sp. BNC1]
gi|123057977|sp|Q11IH4|QUEA_MESSB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|110284742|gb|ABG62801.1| Queuosine biosynthesis protein [Chelativorans sp. BNC1]
Length = 358
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 209/366 (57%), Positives = 261/366 (71%), Gaps = 17/366 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRP PRDSAR++VV P + D +V DLP FL DA+V
Sbjct: 1 MRVDLFDFDLPEERIALRPASPRDSARMLVVRPGKP----LEDCIVRDLPQFLRPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREK---EISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
FN+TKVI A+L+G+R RR + +I TLHMR P+ W + +P+K + G+ + F
Sbjct: 57 FNDTKVIPARLSGIR-----RRGETVAQIEATLHMRAGPDRWKAFLKPAKRVAVGERIQF 111
Query: 118 FSQDGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
DG+S L+ATV +K GE LLVF SG L+ I+ G +PLPPYIA KRP D
Sbjct: 112 -GHDGESCFLGSLDATVAEKGEGGEALLVFDFSGPVLDEAIAAAGHVPLPPYIASKRPDD 170
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
RD DYQT YA+ +G+VAAPTAGLHFT +L S L +IG++ +FVTLHVGAGTF+PVK E
Sbjct: 171 ERDRADYQTIYAREEGAVAAPTAGLHFTPDLFSALDTIGVERHFVTLHVGAGTFLPVKAE 230
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
DT+ H MH+E G +D TA ALN+V++RGG I++VGTTSLRLLE+A G++ WSG T
Sbjct: 231 DTEAHRMHAEWGEVDGMTADALNAVRARGGCIIAVGTTSLRLLESAAEPSGLLKAWSGET 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFITPGYRFRA+DILM+NFHLP+STL MLVSAF G+E K Y HAI YRFYSYGD+
Sbjct: 291 DIFITPGYRFRAIDILMTNFHLPRSTLFMLVSAFSGLETMKSAYSHAIDQGYRFYSYGDS 350
Query: 354 SLLFQK 359
SLLF++
Sbjct: 351 SLLFRE 356
>gi|306841819|ref|ZP_07474502.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
sp. BO2]
gi|306288100|gb|EFM59494.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
sp. BO2]
Length = 363
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/360 (58%), Positives = 256/360 (71%), Gaps = 11/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRPV PRD A+L+ V P D V DLP L DA+V
Sbjct: 1 MRVDLFDFDLPEERIALRPVEPRDHAKLLHVRPGQP----FEDRHVYDLPDLLQPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R ++S TLHMRV P+ W + RP+K +K+GD + F
Sbjct: 57 FNDTKVIPAQLEGMR--ERTGSISQVSATLHMRVGPDRWKAFLRPAKRVKEGDRIRF-GH 113
Query: 121 DGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
G S L+ATV +K + GE LLVF +SG L+ I+ VG IPLPPYIA KRP D RD
Sbjct: 114 SGTSCFLGTLDATVAEKGDAGEALLVFDLSGAVLDEAIAAVGHIPLPPYIASKRPEDERD 173
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT YA+ +G+VAAPTAGLHFT +LL ++ + GI+ +FVTLHVGAGTF+PVK +DT
Sbjct: 174 RKDYQTVYAREEGAVAAPTAGLHFTPDLLEKIKARGIEEHFVTLHVGAGTFLPVKADDTG 233
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
DH MH+EIG + TA ALN+V RGGRI+ VGTTSLRL+E+AT EDGI+ PWSG T+IF
Sbjct: 234 DHKMHAEIGHVSQRTASALNAVHERGGRIICVGTTSLRLIESATGEDGIVRPWSGATDIF 293
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFRAVD+LM+NFHLP+STL MLVSAF G++ Y +AI+ YRFYSYGD SLL
Sbjct: 294 ITPGYRFRAVDLLMTNFHLPRSTLFMLVSAFSGLDTMHAAYNYAIADGYRFYSYGDASLL 353
>gi|225627567|ref|ZP_03785604.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti str. Cudo]
gi|260168801|ref|ZP_05755612.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
sp. F5/99]
gi|261758283|ref|ZP_06001992.1| queuosine biosynthesis protein [Brucella sp. F5/99]
gi|225617572|gb|EEH14617.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti str. Cudo]
gi|261738267|gb|EEY26263.1| queuosine biosynthesis protein [Brucella sp. F5/99]
Length = 363
Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/360 (58%), Positives = 257/360 (71%), Gaps = 11/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RI LRPV PRD A+L+ V P D V DLP L DA+V
Sbjct: 1 MRVDLFDFDLPEERITLRPVEPRDHAKLLHVRPGEP----FEDRHVYDLPDLLQPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R N ++S TLHMRV P+ W + RP+K +K+GD + F
Sbjct: 57 FNDTKVIPAQLEGMRERTGNI--SQVSATLHMRVGPDRWKAFLRPAKRVKEGDRIRF-GH 113
Query: 121 DGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
G S L+ATV +K ++GE LLVF +SG L+ I+ VG IPLPPYIA KRP D RD
Sbjct: 114 SGTSCFLGTLDATVAEKGDSGEALLVFDLSGAVLDEAIAAVGHIPLPPYIASKRPEDERD 173
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT YA+ +G+VAAPTAGLHFT +LL ++ + GI+ +FVTLHVGAGTF+PVK +DT
Sbjct: 174 RKDYQTVYAREEGAVAAPTAGLHFTPDLLEKIKARGIEEHFVTLHVGAGTFLPVKADDTG 233
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
DH MH+EIG + TA ALN+V RGGRI+ VGTTSLRL+E+AT EDG++ PWSG T+IF
Sbjct: 234 DHKMHAEIGHVSQRTASALNAVHERGGRIICVGTTSLRLIESATGEDGVVRPWSGATDIF 293
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFRAVD+LM+NFHLP+STL MLVSAF G++ Y +AI+ YRFYSYGD SLL
Sbjct: 294 ITPGYRFRAVDLLMTNFHLPRSTLFMLVSAFSGLDTMHAAYNYAIADGYRFYSYGDASLL 353
>gi|254693807|ref|ZP_05155635.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 3 str. Tulya]
gi|261214086|ref|ZP_05928367.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 3 str. Tulya]
gi|260915693|gb|EEX82554.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 3 str. Tulya]
Length = 363
Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust.
Identities = 211/360 (58%), Positives = 257/360 (71%), Gaps = 11/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRPV PRD A+L+ V P D V DLP L DA+V
Sbjct: 1 MRVDLFDFDLPEERIALRPVEPRDHAKLLHVRPGEP----FEDRHVYDLPDLLQPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R N ++S TLHMRV P+ W + RP+K +K+GD + F
Sbjct: 57 FNDTKVIPAQLEGMRERTGNI--SQVSATLHMRVGPDRWKAFLRPAKRVKEGDRIRF-GH 113
Query: 121 DGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
G S L+ATV +K ++GE LLVF +SG L+ I+ VG IPLPPYIA KRP D RD
Sbjct: 114 SGTSCFLGTLDATVAEKGDSGEALLVFDLSGAVLDEAIAAVGHIPLPPYIASKRPEDERD 173
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT YA+ +G+VAAPTAGLHFT +LL ++ + GI+ +FVTLHVGAGTF+PVK +DT
Sbjct: 174 RKDYQTVYAREEGAVAAPTAGLHFTPDLLEKIKARGIEEHFVTLHVGAGTFLPVKADDTG 233
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
DH MH+EIG + TA ALN+V RGGRI+ VGTTSLRL+E+AT EDG++ PWSG T IF
Sbjct: 234 DHKMHAEIGHVSQRTASALNAVHERGGRIICVGTTSLRLIESATGEDGVVRPWSGATYIF 293
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFRAVD+LM+NFHLP+STL MLVSAF G++ Y +AI+ YRFYSYGD SLL
Sbjct: 294 ITPGYRFRAVDLLMTNFHLPRSTLFMLVSAFSGLDTMHAAYNYAIADGYRFYSYGDASLL 353
>gi|306843960|ref|ZP_07476555.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
sp. BO1]
gi|306275715|gb|EFM57439.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
sp. BO1]
Length = 363
Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust.
Identities = 210/360 (58%), Positives = 257/360 (71%), Gaps = 11/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRPV PRD A+L+ + P D V DLP L DA+V
Sbjct: 1 MRVDLFDFDLPEERIALRPVEPRDHAKLLHIRPGQP----FEDRHVYDLPDLLQPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R N ++S TLHMRV P+ W + RP+K +K+GD + F
Sbjct: 57 FNDTKVIPAQLEGMRERTGNI--SQVSATLHMRVGPDRWKAFLRPAKRVKEGDRIRF-GH 113
Query: 121 DGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
G S L+ATV +K + GE LLVF +SG L+ I+ VG IPLPPYIA KRP D RD
Sbjct: 114 SGTSCFLGTLDATVAEKGDAGEALLVFDLSGAVLDEAIAAVGHIPLPPYIASKRPEDERD 173
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT YA+ +G+VAAPTAGLHFT +LL ++ + GI+ +FVTLHVGAGTF+PVK +DT
Sbjct: 174 RKDYQTVYAREEGAVAAPTAGLHFTPDLLEKIKARGIEEHFVTLHVGAGTFLPVKADDTG 233
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
DH MH+EIG + TA ALN+V RGGRI+ VGTTSLRL+E+A+ EDGI+ PWSG T+IF
Sbjct: 234 DHKMHAEIGHVSQRTASALNAVHERGGRIICVGTTSLRLIESASGEDGIVRPWSGATDIF 293
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFRAVD+LM+NFHLP+STL MLVSAF G++ Y +AI+ YRFYSYGD SLL
Sbjct: 294 ITPGYRFRAVDLLMTNFHLPRSTLFMLVSAFSGLDTMHAAYNYAIADDYRFYSYGDASLL 353
>gi|153009507|ref|YP_001370722.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Ochrobactrum anthropi ATCC 49188]
gi|166216733|sp|A6X0Y9|QUEA_OCHA4 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|151561395|gb|ABS14893.1| Queuosine biosynthesis protein [Ochrobactrum anthropi ATCC 49188]
Length = 363
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/360 (57%), Positives = 253/360 (70%), Gaps = 11/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP IALRP PRD ARL+ V P D V +LP L DA+V
Sbjct: 1 MRVDLFDFDLPEESIALRPAEPRDHARLLRVRPGQP----FEDRQVFELPDLLQPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R N ++S TLHMR P+ W + RP K +K+GD + F
Sbjct: 57 FNDTKVIPAQLEGMRERDGNI--SQVSATLHMRTGPDRWKAFLRPGKRVKEGDRIRF-GH 113
Query: 121 DGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
G S L+ATV +K + GE LLVF +SG L+ I+ VG IPLPPYIA KR D RD
Sbjct: 114 SGSSCFLGTLDATVAEKGDAGEALLVFDLSGAMLDEAIASVGHIPLPPYIASKRAEDERD 173
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT YA+ +G+VAAPTAGLHFT +LL ++ + G++ +FVTLHVGAGTF+PVK +DT
Sbjct: 174 RKDYQTVYAREEGAVAAPTAGLHFTPDLLEKIKAKGVEEHFVTLHVGAGTFLPVKADDTT 233
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
DH MHSEIG++ TA ALN+V RGG+I+ VGTTSLRL+E+A EDGII PW+G T+IF
Sbjct: 234 DHKMHSEIGYVSQRTADALNAVHERGGKIICVGTTSLRLIESAAGEDGIIRPWAGATDIF 293
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGY+FRAVD+LM+NFHLP+STL MLVSAF G E Y+HAIS+ YRFYSYGD SLL
Sbjct: 294 ITPGYKFRAVDLLMTNFHLPRSTLFMLVSAFSGFETMHAAYEHAISNGYRFYSYGDASLL 353
>gi|225852594|ref|YP_002732827.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
melitensis ATCC 23457]
gi|256263912|ref|ZP_05466444.1| queuosine biosynthesis protein [Brucella melitensis bv. 2 str.
63/9]
gi|254764268|sp|C0RJ65|QUEA_BRUMB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|225640959|gb|ACO00873.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
melitensis ATCC 23457]
gi|263094045|gb|EEZ17979.1| queuosine biosynthesis protein [Brucella melitensis bv. 2 str.
63/9]
gi|326409115|gb|ADZ66180.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
melitensis M28]
gi|326538822|gb|ADZ87037.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
melitensis M5-90]
Length = 363
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/360 (58%), Positives = 257/360 (71%), Gaps = 11/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRPV PRD A+L+ V P D V DL L DA+V
Sbjct: 1 MRVDLFDFDLPEERIALRPVEPRDHAKLLHVRPGEP----FEDRHVYDLFDLLQPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R N ++S TLHMRV P+ W + RP+K +K+GD + F
Sbjct: 57 FNDTKVIPAQLEGMRERTGNI--SQVSATLHMRVGPDRWKAFLRPAKRVKEGDRIRF-GH 113
Query: 121 DGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
G S L+ATV +K ++GE LLVF +SG L+ I+ VG IPLPPYIA KRP D RD
Sbjct: 114 SGTSCFLGTLDATVAEKGDSGEALLVFDLSGAVLDEAIAAVGHIPLPPYIASKRPEDERD 173
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT YA+ +G+VAAPTAGLHFT +LL ++ + GI+ +FVTLHVGAGTF+PVK +DT
Sbjct: 174 RKDYQTVYAREEGAVAAPTAGLHFTPDLLEKIKARGIEEHFVTLHVGAGTFLPVKADDTG 233
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
DH MH+EIG + TA ALN+V RGGRI+ VGTTSLRL+E+AT EDG++ PWSG T+IF
Sbjct: 234 DHKMHAEIGHVSQRTASALNAVHERGGRIICVGTTSLRLIESATGEDGVVRPWSGATDIF 293
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFRAVD+LM+NFHLP+STL MLVSAF G++ Y +AI+ YRFYSYGD SLL
Sbjct: 294 ITPGYRFRAVDLLMTNFHLPRSTLFMLVSAFSGLDTMHAAYNYAIADGYRFYSYGDASLL 353
>gi|239831893|ref|ZP_04680222.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Ochrobactrum intermedium LMG 3301]
gi|239824160|gb|EEQ95728.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Ochrobactrum intermedium LMG 3301]
Length = 363
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/360 (57%), Positives = 254/360 (70%), Gaps = 11/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP IALRP+ PRD ARL+ V P D V +LP L+ DA+V
Sbjct: 1 MRVDLFDFDLPEESIALRPIEPRDHARLLRVRPGQP----FEDRQVFELPDLLHPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R N ++S TLHMR + W + RP+K +K+GD + F
Sbjct: 57 FNDTKVIPAQLEGMRERDGNI--SQVSATLHMRSGADRWKAFLRPAKRVKEGDRIRF-GH 113
Query: 121 DGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
G S L+ATV +K + GE LLVF +SG L+ I+ VG IPLPPYIA KR D RD
Sbjct: 114 SGSSCFLGTLDATVAEKGDAGEALLVFDLSGAMLDEAIASVGHIPLPPYIASKRAEDERD 173
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT YA+ +G+VAAPTAGLHFT LL ++ + G++ +FVTLHVGAGTF+PVK +DT
Sbjct: 174 RKDYQTVYAREEGAVAAPTAGLHFTPELLEKIKAKGVEEHFVTLHVGAGTFLPVKADDTA 233
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
DH MHSEIG + TA ALN+V RGGRIV VGTTSLRL+E+A EDG+I PWSG T+IF
Sbjct: 234 DHKMHSEIGHVSQRTADALNAVHERGGRIVCVGTTSLRLIESAAGEDGVIRPWSGATDIF 293
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGY+FRAVD+LM+NFHLP+STL MLVSAF G++ + Y HAIS+ YRFYSYGD SLL
Sbjct: 294 ITPGYKFRAVDLLMTNFHLPRSTLFMLVSAFSGLDTMRAAYDHAISNGYRFYSYGDGSLL 353
>gi|114707080|ref|ZP_01439979.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Fulvimarina
pelagi HTCC2506]
gi|114537630|gb|EAU40755.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Fulvimarina
pelagi HTCC2506]
Length = 358
Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust.
Identities = 205/359 (57%), Positives = 257/359 (71%), Gaps = 9/359 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LPP RIALRP PR+SA L+ V +L+ +SD ++DLPA + D +V
Sbjct: 1 MRVDLFDFELPPERIALRPAEPRESAMLLGV--SLTG---LSDLRIADLPALIEPGDVLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREK---EISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
FN+TKVI AQL G R +R + ++ TLHMR+SP SW+ + RP K IK GD L F
Sbjct: 56 FNDTKVIPAQLFGTRVREDSRDGEGVAQVEATLHMRLSPGSWAAFVRPGKRIKVGDTLVF 115
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
S D ++ L A V + GE L F SG +L+ I+ VG +PLPPYIA +R DARD+
Sbjct: 116 ASDDAET-LAAEVTARGEGGEATLTFEHSGPDLDAAIAAVGHVPLPPYIAARRGDDARDW 174
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YA+ G+VAAPTAGLHFT NLL +L G+ F+TLHVGAGTF+PVK +DT+D
Sbjct: 175 TDYQTIYAREAGAVAAPTAGLHFTDNLLEKLHERGVATEFLTLHVGAGTFLPVKADDTED 234
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+EIG IDA A LN+ +S GGRI+SVGTTSLRLLE+A +DG I P++G T+IFI
Sbjct: 235 HRMHAEIGTIDAAMADRLNAARSAGGRIISVGTTSLRLLESAAGDDGRIAPFTGPTDIFI 294
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
TPGYRF+AVD LM+NFHLP+STL MLVSAFCG+E ++ Y+HAI + YRFYSYGD LL
Sbjct: 295 TPGYRFKAVDRLMTNFHLPRSTLFMLVSAFCGLERMRRAYEHAIENGYRFYSYGDACLL 353
>gi|163760249|ref|ZP_02167332.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Hoeflea
phototrophica DFL-43]
gi|162282648|gb|EDQ32936.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Hoeflea
phototrophica DFL-43]
Length = 359
Score = 402 bits (1032), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/364 (58%), Positives = 254/364 (69%), Gaps = 15/364 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF LP IALRP PRDSAR++ V P+ +SD +V DL A L DA+V
Sbjct: 1 MRVDLFDFHLPDESIALRPASPRDSARMLCVAPDGG----LSDAIVRDLAAQLQPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEI--SCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
FN+T+VI AQL G R NR + ++ S TLHMR P+ W + RP K IK GD L F
Sbjct: 57 FNDTRVIPAQLEGFR----NRGDNQVRVSATLHMRSGPDRWKAFVRPGKRIKPGDRLSF- 111
Query: 119 SQDG----QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
DG Q L+AT ++ GEI L+F +SG L+ I G IPLPPYIA KR DA
Sbjct: 112 GGDGSACLQGVLDATAGERGEGGEIELIFDLSGPALDEAIMATGHIPLPPYIASKRGEDA 171
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
+D DYQT YA+ G+VAAPTAGLHFT L + L + GI +FVTLHVGAGTF+PVK +D
Sbjct: 172 QDRKDYQTIYAREDGAVAAPTAGLHFTDALFASLDARGIVRHFVTLHVGAGTFLPVKADD 231
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
T +H MHSEIG + A TA ALN V++ GGRIVSVGTTSLRLLE+A E+G I PWSG T+
Sbjct: 232 TAEHRMHSEIGHVSAETAAALNQVRASGGRIVSVGTTSLRLLESAADENGTIQPWSGPTD 291
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFITPGYRFRAVD+LM+NFHLP+STL MLVSAFCG+E + Y HAI YRFYSYGD+S
Sbjct: 292 IFITPGYRFRAVDVLMTNFHLPRSTLFMLVSAFCGLETMRAAYDHAIETGYRFYSYGDSS 351
Query: 355 LLFQ 358
LLF+
Sbjct: 352 LLFR 355
>gi|254469478|ref|ZP_05082883.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pseudovibrio sp. JE062]
gi|211961313|gb|EEA96508.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pseudovibrio sp. JE062]
Length = 375
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/362 (55%), Positives = 256/362 (70%), Gaps = 7/362 (1%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +FDFDLPP IALRP PRDS+RL+VV P+ +++D V LP L DA+V
Sbjct: 15 MLVDDFDFDLPPENIALRPAVPRDSSRLLVVRPD--GEQLLTDDQVLSLPDLLEPGDALV 72
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF-FS 119
FN+TKVI AQL G R + ++ TLH R S W + RP+K +K GD + F F
Sbjct: 73 FNDTKVIPAQLLGFRTR--DGVTAKVGVTLHQRASAKEWRAFVRPAKKLKVGDTVRFAFD 130
Query: 120 QDGQ--SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
++G+ + L A V +K G+IL F S +L+ I+ VG IPLPPYIA KR D +D
Sbjct: 131 EEGKDAAELSAVVTEKSEAGDILFEFDRSAGDLDAAIAQVGHIPLPPYIAAKRAEDDQDR 190
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YAK +G+VAAPTAGLHFT L + L GI+ +FVTLHVGAGTF+PVK + T+D
Sbjct: 191 KDYQTIYAKHEGAVAAPTAGLHFTDRLFAALEERGIEKHFVTLHVGAGTFLPVKADKTED 250
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH E G I TA ALN+V++RG +IVSVGTTSLR+LE++ TEDG+INP S T+IFI
Sbjct: 251 HKMHFEYGEISEETAAALNAVRARGNKIVSVGTTSLRILESSVTEDGVINPISQSTDIFI 310
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGY+F+A+D LM+NFHLP+STL MLVSA G+EE + Y+HAIS YRFYSYGD+SLLF
Sbjct: 311 TPGYQFKAIDALMTNFHLPRSTLFMLVSALSGMEEMRGAYEHAISSGYRFYSYGDSSLLF 370
Query: 358 QK 359
+K
Sbjct: 371 KK 372
>gi|218531243|ref|YP_002422059.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Methylobacterium chloromethanicum CM4]
gi|254764283|sp|B7KTS1|QUEA_METC4 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|218523546|gb|ACK84131.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylobacterium chloromethanicum CM4]
Length = 368
Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/364 (54%), Positives = 257/364 (70%), Gaps = 10/364 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP + IALRP PRD++RL+VV P PL +D V DLPA L+ DA+V
Sbjct: 1 MRVDLFDFELPEAAIALRPASPRDASRLLVVRPG--DPL--ADRGVRDLPALLSPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L+G+R + LH+R +P+ W +ARP+K + GD + F S+
Sbjct: 57 FNDTRVIPARLSGIRH-RAGGSGQRCEAMLHLREAPDRWRAFARPAKRLAPGDRIRFGSE 115
Query: 121 DGQ-----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
S L+ATV ++ GEILL F +SG L+ I+ +G +PLPPYIA KRP DA+
Sbjct: 116 GASEVCALSGLDATVEERGEGGEILLRFDLSGPALDEAIAGLGALPLPPYIAGKRPTDAQ 175
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D DYQT YA+ G+VAAPTAGLHF+ LL+ + + GI+ VTLHVGAGTF+PVK +DT
Sbjct: 176 DTTDYQTVYAREPGAVAAPTAGLHFSDALLAGIDAAGIERVHVTLHVGAGTFLPVKADDT 235
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
D H MH+EIG +DA TA LN+V++RG R+V+VGTT+LRLLE+A DG I P+SG T+I
Sbjct: 236 DAHRMHAEIGILDAATAARLNAVRARGNRVVAVGTTALRLLESAADPDGTIRPFSGATDI 295
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFRAVD L++NFHLP+STL MLVSAF G++ + Y HAI YRFYSYGD SL
Sbjct: 296 FITPGYRFRAVDALVTNFHLPRSTLFMLVSAFAGLDTMRAAYAHAIQSGYRFYSYGDASL 355
Query: 356 LFQK 359
LF +
Sbjct: 356 LFPE 359
>gi|163852486|ref|YP_001640529.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Methylobacterium extorquens PA1]
gi|226713844|sp|A9VX03|QUEA_METEP RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|163664091|gb|ABY31458.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Methylobacterium extorquens PA1]
Length = 368
Score = 398 bits (1022), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/364 (54%), Positives = 257/364 (70%), Gaps = 10/364 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP + IALRP PRD++RL+VV P PL +D V DLPA L+ DA+V
Sbjct: 1 MRVDLFDFELPEAAIALRPASPRDASRLLVVRPG--DPL--ADRGVRDLPALLSPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L+G+R + LH+R +P+ W +ARP+K + GD + F S+
Sbjct: 57 FNDTRVIPARLSGIRH-RAGGSGQRCEAMLHLREAPDRWRAFARPAKRLAPGDRIRFGSE 115
Query: 121 DGQ-----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
S L+ATV ++ GEILL F +SG L+ I+ +G +PLPPYIA KRP DA+
Sbjct: 116 GASEVCALSGLDATVEERGEGGEILLRFDLSGPALDEAIAGLGALPLPPYIAGKRPTDAQ 175
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D DYQT YA+ G+VAAPTAGLHF+ LL+ + + GI+ VTLHVGAGTF+PVK +DT
Sbjct: 176 DTTDYQTVYAREPGAVAAPTAGLHFSDALLAGIDAAGIERVHVTLHVGAGTFLPVKADDT 235
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+ H MH+EIG +DA TA LN+V++RG R+V+VGTT+LRLLE+A DG I P+SG T+I
Sbjct: 236 EAHRMHAEIGILDAATAARLNAVRARGNRVVAVGTTALRLLESAADPDGTIRPFSGATDI 295
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFRAVD L++NFHLP+STL MLVSAF G++ + Y HAI YRFYSYGD SL
Sbjct: 296 FITPGYRFRAVDALVTNFHLPRSTLFMLVSAFAGLDTMRAAYAHAIQSGYRFYSYGDASL 355
Query: 356 LFQK 359
LF +
Sbjct: 356 LFPE 359
>gi|188582509|ref|YP_001925954.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Methylobacterium populi BJ001]
gi|238692892|sp|B1ZIL2|QUEA_METPB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|179346007|gb|ACB81419.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Methylobacterium populi BJ001]
Length = 366
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/369 (53%), Positives = 257/369 (69%), Gaps = 14/369 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP + IALRP PRD++RL+VV P + ++D V DLPA LN DA+V
Sbjct: 1 MRVDLFDFELPEAAIALRPASPRDASRLLVVRPGET----LADRGVRDLPALLNPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L+G+R + LH+R +P+ W +ARP+K + GD + F +
Sbjct: 57 FNDTRVIPARLSGIRH-RAGGTGQRCEAMLHLREAPDRWRAFARPAKRLAPGDRIRFGGE 115
Query: 121 DGQ---------SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRP 171
S L+ATV ++ GEILL F ++G L+ I+ +G +PLPPYIA KR
Sbjct: 116 GANQGASEVCVLSGLDATVEERGEGGEILLRFDLAGPALDEAIAGLGALPLPPYIAGKRA 175
Query: 172 IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK 231
DARD DYQT YA+ G+VAAPTAGLHF+ LL + + GI+ VTLHVGAGTF+PVK
Sbjct: 176 TDARDTTDYQTVYAREPGAVAAPTAGLHFSDALLDGIDAAGIERIHVTLHVGAGTFLPVK 235
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSG 291
+DT+ H MH+EIG +D TA+ LN+V++RG RIV+VGTT+LRLLE+AT DG + P+SG
Sbjct: 236 ADDTEAHRMHAEIGILDTATAERLNAVRARGNRIVAVGTTALRLLESATDPDGTVRPFSG 295
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T+IFITPGYRFRAVD L++NFHLP+STL MLVSAF G++ + Y HAI+ YRFYSYG
Sbjct: 296 ATDIFITPGYRFRAVDALVTNFHLPRSTLFMLVSAFSGLDTMRAAYAHAIASGYRFYSYG 355
Query: 352 DTSLLFQKR 360
D SLLF +R
Sbjct: 356 DASLLFPER 364
>gi|240139823|ref|YP_002964300.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein queA) [Methylobacterium extorquens
AM1]
gi|240009797|gb|ACS41023.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein queA) [Methylobacterium extorquens
AM1]
Length = 368
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/364 (54%), Positives = 256/364 (70%), Gaps = 10/364 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP + IALRP PRD++RL+VV P PL +D V DLPA L+ DA+V
Sbjct: 1 MRVDLFDFELPEAAIALRPASPRDASRLLVVRPG--DPL--ADRGVRDLPALLSPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L+G+R + LH+R +P+ W +ARP+K + GD + F S+
Sbjct: 57 FNDTRVIPARLSGIRH-RAGGSGQRCEAMLHLREAPDRWRAFARPAKRLAPGDRIRFGSE 115
Query: 121 DGQ-----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
S L+ATV ++ GEILL F +SG L+ I+ +G +PLPPYIA KR DA+
Sbjct: 116 GASEVCALSGLDATVEERGEGGEILLRFDLSGPALDEAIAGLGALPLPPYIAGKRATDAQ 175
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D DYQT YA+ G+VAAPTAGLHF+ LL+ + + GI+ VTLHVGAGTF+PVK +DT
Sbjct: 176 DTTDYQTVYAREPGAVAAPTAGLHFSDALLAGIDAAGIERVHVTLHVGAGTFLPVKADDT 235
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
D H MH+EIG +DA TA LN+V++RG R+V+VGTT+LRLLE+A DG I P+SG T+I
Sbjct: 236 DAHRMHAEIGILDAATAARLNAVRARGNRVVAVGTTALRLLESAADPDGTIRPFSGATDI 295
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFRAVD L++NFHLP+STL MLVSAF G++ + Y HAI YRFYSYGD SL
Sbjct: 296 FITPGYRFRAVDALVTNFHLPRSTLFMLVSAFAGLDTMRAAYAHAIQSGYRFYSYGDASL 355
Query: 356 LFQK 359
LF +
Sbjct: 356 LFPE 359
>gi|13470903|ref|NP_102472.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Mesorhizobium loti MAFF303099]
gi|21263904|sp|Q98M55|QUEA_RHILO RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|14021646|dbj|BAB48258.1| S-adenosylmethionine tRNA ribosyltransferase [Mesorhizobium loti
MAFF303099]
Length = 361
Score = 395 bits (1016), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/362 (56%), Positives = 255/362 (70%), Gaps = 11/362 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP RIALRP PRDSA+++VV + + D V DLP+ L + D +V
Sbjct: 1 MRVDLFDFELPEERIALRPAEPRDSAKMLVVKSGEA----LDDRKVGDLPSLLRAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R + ++ TLHMRV+P+ W + RP K I GD +HF
Sbjct: 57 FNDTKVIPAQLKGIR--RRGEAQAQVEATLHMRVAPDRWLAFMRPGKRIAAGDRIHF-GH 113
Query: 121 DGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
DG S +L+ATVI+K GE LL F +SG L+ + VG IPLPPYIA KR D RD
Sbjct: 114 DGNSCFLGQLDATVIEKGEGGEALLGFDLSGPFLDEALHAVGHIPLPPYIASKRDDDERD 173
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT YA+ +G+VAAPTAGLHFT L + L + G++ +FVTLHVGAGTF+PVK +DT
Sbjct: 174 RADYQTIYAREEGAVAAPTAGLHFTPELFAALDAKGVERHFVTLHVGAGTFLPVKADDTA 233
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
DH MH+EIG + TA ALN+ K+RGGRI++VGTTSLRLLE+A EDG + WSG T+IF
Sbjct: 234 DHKMHAEIGSVSRETADALNAAKARGGRIIAVGTTSLRLLESAAREDGTVPAWSGPTDIF 293
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFR D+LM+NFHLP+STL MLVSAF G++ Y HAI++ YRFYSYGD SLL
Sbjct: 294 ITPGYRFRTADMLMTNFHLPRSTLFMLVSAFSGLDTMGAAYAHAIANRYRFYSYGDASLL 353
Query: 357 FQ 358
++
Sbjct: 354 YR 355
>gi|16125834|ref|NP_420398.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Caulobacter
crescentus CB15]
gi|221234595|ref|YP_002517031.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Caulobacter
crescentus NA1000]
gi|21263914|sp|Q9A7Y2|QUEA_CAUCR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|254764271|sp|B8GVF3|QUEA_CAUCN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|13422980|gb|AAK23566.1| S-adenosylmethionine tRNA ribosyltransferase-isomerase [Caulobacter
crescentus CB15]
gi|220963767|gb|ACL95123.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Caulobacter
crescentus NA1000]
Length = 366
Score = 395 bits (1015), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/366 (54%), Positives = 257/366 (70%), Gaps = 12/366 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP RIALRP PRDSAR +VV P + ++DH+VSDLP FL DA+V
Sbjct: 1 MRLSDFDFDLPEDRIALRPAEPRDSARFLVVRPGQA----VADHIVSDLPDFLRPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREK----EISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
FN+T+VI A+L+G+R + TLH R++P+ WS + RP K +K GD +
Sbjct: 57 FNDTRVIPARLSGLREGRTTGGADGTPVAVEATLHRRLAPDRWSAFMRPGKRLKVGDRVA 116
Query: 117 FFSQDGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
F +G+ RL+A + +K + GE++L F +SG +L+ I+ G +PLPPYIA KR
Sbjct: 117 FGGHEGRVGDLGRLDAVIAEKHDGGEVVLAFDLSGPDLDVGIAQHGDMPLPPYIAAKRGE 176
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D RD DYQT YA+ GSVAAPTAGLHFT LL RL + G+ ++FVTLHVGAGTF+PVK
Sbjct: 177 DERDRADYQTVYAREDGSVAAPTAGLHFTPQLLERLKAKGVSLHFVTLHVGAGTFLPVKT 236
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
++ +H MH+E G + A ALN+ ++ GGRIV VGTTSLRLLE+AT EDGI+ P++
Sbjct: 237 DEVSEHRMHAEYGQVTQEIADALNAARAAGGRIVCVGTTSLRLLESATGEDGIVRPFADE 296
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T IFITPGYRFR D+LM+NFHLPKSTL MLVSAF G E + Y+HAI+ YRFYSYGD
Sbjct: 297 TAIFITPGYRFRTADVLMTNFHLPKSTLFMLVSAFAGTEAMRAAYEHAIATGYRFYSYGD 356
Query: 353 TSLLFQ 358
+SLLF+
Sbjct: 357 SSLLFK 362
>gi|254562239|ref|YP_003069334.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Methylobacterium extorquens DM4]
gi|254269517|emb|CAX25483.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein queA) [Methylobacterium extorquens
DM4]
Length = 368
Score = 395 bits (1014), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/364 (54%), Positives = 256/364 (70%), Gaps = 10/364 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP + IALRP PRD++RL+VV P PL +D V DLP+ L+ DA+V
Sbjct: 1 MRVDLFDFELPEAAIALRPASPRDASRLLVVRPG--DPL--ADRGVRDLPSLLSPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L+G+R + LH+R +P+ W +ARP+K + GD + F S+
Sbjct: 57 FNDTRVIPARLSGIRH-RAGGSGQRCEAMLHLREAPDRWRAFARPAKRLAPGDRIRFGSE 115
Query: 121 DGQ-----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
S L+ATV ++ GEILL F +SG L+ I+ +G +PLPPYIA KR DA+
Sbjct: 116 GASEVCALSGLDATVEERGEGGEILLRFDLSGPALDEAIAGLGALPLPPYIAGKRATDAQ 175
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D DYQT YA+ G+VAAPTAGLHF+ LL+ + + GI+ VTLHVGAGTF+PVK +DT
Sbjct: 176 DTTDYQTVYAREPGAVAAPTAGLHFSDALLAGIDAAGIERVHVTLHVGAGTFLPVKADDT 235
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
D H MH+EIG +DA TA LN+V++RG R+V+VGTT+LRLLE+A DG I P+SG T+I
Sbjct: 236 DAHRMHAEIGILDAATAARLNAVRARGNRVVAVGTTALRLLESAADPDGTIRPFSGATDI 295
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFRAVD L++NFHLP+STL MLVSAF G++ + Y HAI YRFYSYGD SL
Sbjct: 296 FITPGYRFRAVDALVTNFHLPRSTLFMLVSAFAGLDTMRAAYAHAIQSGYRFYSYGDASL 355
Query: 356 LFQK 359
LF +
Sbjct: 356 LFPE 359
>gi|319783733|ref|YP_004143209.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317169621|gb|ADV13159.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 362
Score = 394 bits (1013), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/362 (55%), Positives = 253/362 (69%), Gaps = 11/362 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP RIALRP PRDSA++++V P + D V DLP+ L++ D +V
Sbjct: 1 MRVDLFDFELPEERIALRPAQPRDSAKMLLVKPGEE----LEDRTVGDLPSLLSAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R ++ TLHMR++P+ W + RP K I GD +HF
Sbjct: 57 FNDTKVIPAQLKGIR--RRGEATAQVEATLHMRMAPDRWLAFMRPGKRIAAGDRIHF-GH 113
Query: 121 DGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
DG S +L+ATVI+K GE LL F +SG L+ + VG IPLPPYIA KR D RD
Sbjct: 114 DGNSCFLGQLDATVIEKGEGGEALLGFDLSGPFLDEALHAVGHIPLPPYIASKRDDDERD 173
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT YA +G+VAAPTAGLHFT L + L + G++ FVTLHVGAGTF+PVK +DT
Sbjct: 174 RADYQTIYASEEGAVAAPTAGLHFTPELFAALDAKGVERRFVTLHVGAGTFLPVKADDTA 233
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
DH MH+E G + TA ALN+ ++RGGRIV+VGTTSLRLLE+A EDG + WSG T+IF
Sbjct: 234 DHKMHAETGSVSEATADALNAARARGGRIVAVGTTSLRLLESAAREDGTLAAWSGPTDIF 293
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFR D+LM+NFHLP+STL MLVSAF G++ + Y HAI++ YRFYSYGD SLL
Sbjct: 294 ITPGYRFRTADMLMTNFHLPRSTLFMLVSAFSGLDTMRAAYAHAIANRYRFYSYGDASLL 353
Query: 357 FQ 358
F+
Sbjct: 354 FR 355
>gi|304391768|ref|ZP_07373710.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ahrensia
sp. R2A130]
gi|303295997|gb|EFL90355.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ahrensia
sp. R2A130]
Length = 371
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/360 (53%), Positives = 254/360 (70%), Gaps = 14/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF+LP RIALRPV PRDSA+L+ ++ L +D +V++L L+ DA+V
Sbjct: 1 MKIDAFDFELPEERIALRPVNPRDSAKLLTINAGRDGEL--ADRVVNELAELLSPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREK---EISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
FN+TKVI AQL G+R RRE + TLHM +P++W + R +K +K G+++ F
Sbjct: 59 FNDTKVIPAQLEGIR-----RREDVEARVGLTLHMEEAPDTWRAFVRGAKKLKLGELVEF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
G + A V++K + GEI+ F+ SG L ++ G IPLPPYIA KR D RD
Sbjct: 114 ----GGADFTAEVLEKGDAGEIVFRFNRSGQALRDALAKRGHIPLPPYIALKRGEDERDR 169
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YA+ +G+VAAPTAGLHFT L+++L + GI+ +FVTLHVGAGTF+PVKV+DTDD
Sbjct: 170 SDYQTIYARDEGAVAAPTAGLHFTDELMAKLDARGIERHFVTLHVGAGTFLPVKVDDTDD 229
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H+MHSE G + TA AL V+SRGG++V+VGTTSLRLLE+A E G + W G T+IFI
Sbjct: 230 HVMHSERGIVTQETADALARVRSRGGKVVAVGTTSLRLLESAAQETGKVTAWQGATDIFI 289
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY F AVD LM+NFHLPKSTL MLVSAF G++ ++ Y+HAI + YRFYSYGD+SLLF
Sbjct: 290 QPGYNFLAVDALMTNFHLPKSTLFMLVSAFAGLDTMRRAYEHAIENQYRFYSYGDSSLLF 349
>gi|170743609|ref|YP_001772264.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Methylobacterium sp. 4-46]
gi|238688051|sp|B0U9V5|QUEA_METS4 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|168197883|gb|ACA19830.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Methylobacterium sp. 4-46]
Length = 362
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/363 (53%), Positives = 251/363 (69%), Gaps = 10/363 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP + IALRPV PRD+ARL+ V P +++ V DLPA L D +V
Sbjct: 1 MRVDLFDFDLPEALIALRPVEPRDAARLLRVAPGHP----LAEARVRDLPALLRPGDCLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS- 119
FN+T+VI A+L G+R + + LH R P+ W +ARP K +++GD + F S
Sbjct: 57 FNDTRVIPARLRGLR-ARPDGSSVRVEAMLHRREGPDCWRAFARPGKRLREGDRIRFGSG 115
Query: 120 QDGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
+DG + L+ATV + GEI L F ++G L+ ++ +G +PLPPYIA +RP DAR
Sbjct: 116 RDGSACDLGHLDATVAARGEEGEITLAFDLAGAFLDEAVARLGELPLPPYIAGRRPADAR 175
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D DYQT YA+ G+VAAPTAGLHFT +LL+RL + GI +TLHVGAGTF+PVK +DT
Sbjct: 176 DAADYQTVYAREPGAVAAPTAGLHFTPDLLARLGAAGIGEARLTLHVGAGTFLPVKAQDT 235
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+ H MH+E G I TA LN ++ GGRIV+VGTTSLRLLE+A DG I P++G T+I
Sbjct: 236 EAHRMHAETGEITPGTAARLNRARAEGGRIVAVGTTSLRLLESAAEPDGTIRPFAGATDI 295
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFRAVD+LM+NFHLP+STL MLVSAF G+E + Y HA++ YRFYSYGD SL
Sbjct: 296 FITPGYRFRAVDVLMTNFHLPRSTLFMLVSAFAGLETMRAAYAHAVAQGYRFYSYGDASL 355
Query: 356 LFQ 358
LF+
Sbjct: 356 LFR 358
>gi|90419655|ref|ZP_01227565.1| S-adenosylmethionine, tRNA ribosyltransferase-isomerase
[Aurantimonas manganoxydans SI85-9A1]
gi|90336592|gb|EAS50333.1| S-adenosylmethionine, tRNA ribosyltransferase-isomerase
[Aurantimonas manganoxydans SI85-9A1]
Length = 363
Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/368 (55%), Positives = 248/368 (67%), Gaps = 22/368 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LPP RIALRPV PR+SARL+ V P ++D V DLP+ L D +V
Sbjct: 1 MRVDLFDFELPPERIALRPVSPRESARLLCVDPARG----LADQTVGDLPSLLTPGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRRE--------KEISCTLHMRVSPNSWSVYARPSKVIKKG 112
FN+TKVI AQL G+R RR +IS TLHMR +P+ W + RP K +K G
Sbjct: 57 FNDTKVIPAQLEGLR-----RRPGSVDGEGVAQISATLHMREAPDRWLAFVRPGKRVKVG 111
Query: 113 DILHFFSQDGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIAR 168
D + F G + LEATV + GE L F +SG L+ I+ VG IPLPPYIA
Sbjct: 112 DRIAF-GHGGNACLAGTLEATVETRGEGGEASLRFDLSGPALDEAIAAVGHIPLPPYIAS 170
Query: 169 KRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFM 228
KRP D++D DYQT YA+ G+VAAPTAGLHFT +L +RL + I ++TLHVGAGTF+
Sbjct: 171 KRPDDSQDRSDYQTVYAREDGAVAAPTAGLHFTPDLFARLAARDIAAEYLTLHVGAGTFL 230
Query: 229 PVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINP 288
PVK EDT DH MHSEIG + +A+ LN+ + G RIVSVGTTSLRLLE+A DG I P
Sbjct: 231 PVKAEDTADHRMHSEIGRVTEESAERLNAARREGRRIVSVGTTSLRLLESAADADGTIRP 290
Query: 289 WSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
+SG T+IFITPGYRFRAVD LM+NFHLP+STL MLVSAF GI+ K Y HAI + YRFY
Sbjct: 291 FSGPTDIFITPGYRFRAVDRLMTNFHLPRSTLFMLVSAFSGIDTMKSAYAHAIGNEYRFY 350
Query: 349 SYGDTSLL 356
SYGD LL
Sbjct: 351 SYGDACLL 358
>gi|307947103|ref|ZP_07662438.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseibium
sp. TrichSKD4]
gi|307770767|gb|EFO29993.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseibium
sp. TrichSKD4]
Length = 357
Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/360 (55%), Positives = 252/360 (70%), Gaps = 6/360 (1%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDF LP RIALRP PRDSAR++VV P + L SD V DLP L DA+V
Sbjct: 1 MRVEDFDFVLPNERIALRPARPRDSARMLVVQPGDTAEL--SDFGVRDLPLLLEPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G R E IS TLH+R + + W + RP K ++ GD+L F +
Sbjct: 59 FNDTKVIPAQLEGKRVR--GDIEARISATLHLRAAADRWKAFVRPGKKVQLGDVLVF--E 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+G L A +K G++LLVF S EL+ I+ VG IPLPPYIA+KR D +D DY
Sbjct: 115 EGGVTLTARAEEKSPAGDVLLVFDRSAAELDEAIASVGHIPLPPYIAQKRGEDEQDRSDY 174
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHFT +LL+ L + GI+ + VTLHVGAGTF+PVKV+DTDDH M
Sbjct: 175 QTMFAEKDGAVAAPTAGLHFTPDLLAALDARGIEQHRVTLHVGAGTFLPVKVDDTDDHQM 234
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G + TA AL +VK+RG ++VSVGTTSLR+LE+A G + ++G T+IFITPG
Sbjct: 235 HAEWGEVSEETAAALQAVKARGNKVVSVGTTSLRILESAAQGSGGLQAFAGETSIFITPG 294
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
Y FRA+D LM+NFHLP+STL MLVSA G++ K+ Y HAI H YRFYSYGD SLLF ++
Sbjct: 295 YEFRAIDALMTNFHLPRSTLFMLVSALSGLDVMKRAYTHAIDHEYRFYSYGDASLLFPQK 354
>gi|220922620|ref|YP_002497922.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Methylobacterium nodulans ORS 2060]
gi|219947227|gb|ACL57619.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylobacterium nodulans ORS 2060]
Length = 364
Score = 392 bits (1006), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/363 (53%), Positives = 252/363 (69%), Gaps = 10/363 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP + IALRP PRDSARLM V P +D V DLP L D +V
Sbjct: 4 MRVDLFDFDLPEALIALRPAVPRDSARLMRVRPGEPP----ADAQVRDLPDLLRPGDCLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS- 119
FN+TKVI A+L G+R + + LH R + + W +ARP+K +++GD + F +
Sbjct: 60 FNDTKVIPARLRGLR-ARPDGTVVRVEAMLHHREAADCWRAFARPAKRLREGDRIRFGAG 118
Query: 120 QDGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
Q+G + L+ATV+ + GEI L F ++G L+ + +G +PLPPYIA +RP DAR
Sbjct: 119 QEGAACDLGHLDATVVARGEGGEITLAFDLAGAVLDEAVVRLGELPLPPYIAGRRPADAR 178
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D DYQT YA+ G+VAAPTAGLHFT +LL+RL + GI VTLHVGAGTF+PVK EDT
Sbjct: 179 DAADYQTVYARAPGAVAAPTAGLHFTPDLLARLDAAGIGQARVTLHVGAGTFLPVKAEDT 238
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
DH MH+E G I TA ALN V++ GGRIV+VGTT+LRL+E+A DG + P++G T+I
Sbjct: 239 ADHRMHAETGEITPETAAALNRVRAAGGRIVAVGTTALRLVESAAAPDGTLRPFAGETDI 298
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFRAVD+LM+NFHLP+STL MLVSAF G++ ++ Y AI+ YRFYSYGD+SL
Sbjct: 299 FITPGYRFRAVDVLMTNFHLPRSTLFMLVSAFAGLDTMREAYAAAIARGYRFYSYGDSSL 358
Query: 356 LFQ 358
LF+
Sbjct: 359 LFR 361
>gi|295689992|ref|YP_003593685.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Caulobacter
segnis ATCC 21756]
gi|295431895|gb|ADG11067.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Caulobacter
segnis ATCC 21756]
Length = 368
Score = 392 bits (1006), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/366 (54%), Positives = 256/366 (69%), Gaps = 12/366 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP RIALRP PRD+ARL+VV P ++DH+V +LP FL DA+V
Sbjct: 1 MHLSDFDFDLPEDRIALRPAEPRDAARLLVVRPGQP----LADHVVRELPDFLQPGDAMV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREK----EISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
FN+T+VI A+L+G+R + TLH R++P+ WS + RP K +K GD +
Sbjct: 57 FNDTRVIPARLSGLREGRTTGGADGTPVAVEATLHRRLTPDRWSAFMRPGKRLKVGDRVA 116
Query: 117 FFSQDGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
F +D ++ RL+ATV +K GE++L F +SG +L+ I+ G +PLPPYIA KR
Sbjct: 117 FGGRDDRACALDRLDATVAEKHEGGEVVLAFDLSGPDLDVGIARHGDMPLPPYIAAKRGE 176
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D RD DYQT YA+ GSVAAPTAGLHFT +LL L + G+ +FVTLHVGAGTF+PVK
Sbjct: 177 DERDRADYQTVYAREDGSVAAPTAGLHFTPSLLEALKAKGVSTHFVTLHVGAGTFLPVKT 236
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H MH+E G + A ALN+ ++ GGRI+ VGTTSLRLLE+AT EDG++ P++
Sbjct: 237 DDVSEHKMHAEYGQVTREVADALNAARAAGGRIICVGTTSLRLLESATGEDGVVKPFADE 296
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T IFITPGYRFRA DILM+NFHLPKSTL MLVSAF G E + Y+HAIS YRFYSYGD
Sbjct: 297 TAIFITPGYRFRAADILMTNFHLPKSTLFMLVSAFAGRETMRAAYEHAISTGYRFYSYGD 356
Query: 353 TSLLFQ 358
SLLF+
Sbjct: 357 GSLLFR 362
>gi|302383465|ref|YP_003819288.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Brevundimonas subvibrioides ATCC 15264]
gi|302194093|gb|ADL01665.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Brevundimonas subvibrioides ATCC 15264]
Length = 356
Score = 391 bits (1005), Expect = e-107, Method: Compositional matrix adjust.
Identities = 203/367 (55%), Positives = 251/367 (68%), Gaps = 19/367 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP RIALRP PRDSARL+VV ++DH++ DLPAFL DA+V
Sbjct: 1 MKTADFDFDLPEDRIALRPAEPRDSARLLVVQDG-----ALADHVIRDLPAFLRPGDALV 55
Query: 61 FNNTKVITAQLNGVRFCH---INRREKE-----ISCTLHMRVSPNSWSVYARPSKVIKKG 112
FN+T+VI A+L+GVR + E E + TLH R +P++WS + +P K I+
Sbjct: 56 FNDTRVIPARLSGVRQRPNPVVGSPEGETLTVPVEATLHHRDTPDTWSAFMKPGKRIRPD 115
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
D + F S L ATVI K + G + L F +SG L+ I VG +PLPPYIA KRP
Sbjct: 116 DRIVFDS------LSATVIAKSDDGLVTLRFDVSGPALDDAIRAVGVMPLPPYIAAKRPE 169
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D RD +DYQT +A GSVAAPTAGLHFT LL + + G+ + VTLHVGAGTF+PVK
Sbjct: 170 DDRDRLDYQTVFATHDGSVAAPTAGLHFTPALLDAIRAKGVTTHAVTLHVGAGTFLPVKA 229
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+DT DH MHSE G + TA ALN+V + GGRIV VGTTSLRLLE+ATT DG+I P+ G
Sbjct: 230 DDTADHRMHSEWGTVSGETAAALNAVHANGGRIVCVGTTSLRLLESATTPDGVIQPFHGD 289
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T IFITPGY FRA D+L++NFHLPKSTL MLVSAF G++ K Y HA++ YRFYSYGD
Sbjct: 290 TAIFITPGYAFRAADVLVTNFHLPKSTLFMLVSAFAGLDTMKTAYAHAVADGYRFYSYGD 349
Query: 353 TSLLFQK 359
SLLF++
Sbjct: 350 GSLLFRQ 356
>gi|254418229|ref|ZP_05031953.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Brevundimonas sp. BAL3]
gi|196184406|gb|EDX79382.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Brevundimonas sp. BAL3]
Length = 372
Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/365 (56%), Positives = 245/365 (67%), Gaps = 12/365 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP RIALRP PRDSARL+VV + D ++ DLP FL DA+V
Sbjct: 7 MKTADFDFDLPEDRIALRPADPRDSARLLVVKDG-----ALDDRIIRDLPDFLRPGDALV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREK---EISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
FN+T+VI A+L+GVR E + TLH R +P+ WS + +P K IK GD + F
Sbjct: 62 FNDTRVIPARLSGVRTRPGPEGETLTVAVEATLHHRDAPDVWSAFMKPGKRIKPGDRIRF 121
Query: 118 FSQDGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
+ + RL+ATV K + G I L F +SG L+ I VG +PLPPYIA KRP D
Sbjct: 122 GQEADAACDLGRLDATVTAKGDDGLITLKFDLSGPALDDAIRDVGVMPLPPYIAAKRPED 181
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
RD DYQT +A+ GSVAAPTAGLHFT LL + + G+ + VTLHVGAGTF+PVK +
Sbjct: 182 DRDRSDYQTVFAEHDGSVAAPTAGLHFTPALLDAIRARGVSTHAVTLHVGAGTFLPVKAD 241
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
D DH MHSE G + TA ALN+V + GGRIV VGTTSLRLLE+ATTE G I P+ G T
Sbjct: 242 DLADHRMHSEWGEVSPETADALNAVHAAGGRIVCVGTTSLRLLESATTEAGEIRPFHGDT 301
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFITPGYRFRAVD+LM+NFHLPKSTL MLVSAF G K Y HAI+ YRFYSYGD
Sbjct: 302 AIFITPGYRFRAVDVLMTNFHLPKSTLFMLVSAFAGRAAMKTAYAHAIADGYRFYSYGDG 361
Query: 354 SLLFQ 358
SLLF+
Sbjct: 362 SLLFR 366
>gi|158423932|ref|YP_001525224.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Azorhizobium caulinodans ORS 571]
gi|172047956|sp|A8I5Q2|QUEA_AZOC5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|158330821|dbj|BAF88306.1| S-adenosylmethionine [Azorhizobium caulinodans ORS 571]
Length = 354
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/356 (53%), Positives = 249/356 (69%), Gaps = 4/356 (1%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLPP RIALRP PR+SARL+ V P + L D ++DLP L DA+V
Sbjct: 1 MRVDAFDFDLPPERIALRPAEPRESARLLRVRPGAAPEL--EDRTIADLPDLLQPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L+G R I TL R+S ++W+ +A+P+K + G+ + F
Sbjct: 59 VNDTKVIPARLDGTR-TRAGGSTVAIEATLIRRLSGSAWAAFAKPAKRLAVGETVVFAGA 117
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G + LEA V+DK +GE+ F++SG EL+ I +G +PLPPYIA KRP D RD DY
Sbjct: 118 SGGT-LEARVLDKLESGEVHFAFALSGPELDAAIDAIGHMPLPPYIAAKRPEDDRDRTDY 176
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
Q +A+++GSVAAPTA LHFT +LL+++ + G+ Y VTLHVGAGTF+PVK EDT DH M
Sbjct: 177 QPVFARVEGSVAAPTASLHFTPDLLAKIAARGVSRYTVTLHVGAGTFLPVKAEDTTDHQM 236
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G + TA LN+VK+RGGRI++VG+T+ RL+ETA T +G I P+ G T+IFITPG
Sbjct: 237 HAEWGEVSPETAAELNAVKARGGRIITVGSTATRLIETAATPEGSIRPYLGETDIFITPG 296
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y FRA D++++NFHLP+STL+MLV+AF G E K+ Y HAI+ YRFYSYGD LL
Sbjct: 297 YAFRASDVMLTNFHLPRSTLVMLVAAFVGHETQKRAYAHAIASGYRFYSYGDACLL 352
>gi|254503766|ref|ZP_05115917.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Labrenzia
alexandrii DFL-11]
gi|222439837|gb|EEE46516.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Labrenzia
alexandrii DFL-11]
Length = 360
Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust.
Identities = 196/357 (54%), Positives = 252/357 (70%), Gaps = 6/357 (1%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDF+L RIALRP PRD+AR++VV P P +SD V DLPA L DA+V
Sbjct: 1 MRVDQFDFELSNERIALRPARPRDAARMLVVRPG-EIP-ELSDMGVRDLPALLEPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G R E IS TLH+R + + W + RP+K ++ D++ F +
Sbjct: 59 FNDTKVIPAQLEGKRVR--GDIEAGISVTLHLRSAADGWKAFVRPAKKLQVEDLVVF--E 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+RL ATV +K + GE+LL F SG +L+ I+ VG IPLPPYIA+KR D +D DY
Sbjct: 115 GNGARLTATVKEKSDGGEVLLAFDCSGPDLDVAIAQVGHIPLPPYIAQKRGEDEQDRQDY 174
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHFT LL+ + GI+++ VTLHVGAGTF+PVK +DTDDH M
Sbjct: 175 QTIFAEKDGAVAAPTAGLHFTPELLAAIKDRGIEMHRVTLHVGAGTFLPVKADDTDDHKM 234
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G + TA AL +VK+RG ++VS+GTTSLR+LE+A E G I P++ T+IFITPG
Sbjct: 235 HAEWGEVSEETAAALQAVKARGNKVVSIGTTSLRILESAAQETGTIVPFADETSIFITPG 294
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+A+D LM+NFHLP+STL MLVSA G+E + YQHAI YRFYSYGD SLLF
Sbjct: 295 YKFKAIDALMTNFHLPRSTLFMLVSALSGLETMRAAYQHAIDTEYRFYSYGDASLLF 351
>gi|298291669|ref|YP_003693608.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Starkeya
novella DSM 506]
gi|296928180|gb|ADH88989.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Starkeya
novella DSM 506]
Length = 364
Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/363 (52%), Positives = 251/363 (69%), Gaps = 6/363 (1%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLPP RIALRPV PRD+AR++VV P + L +D V DL L DA+V
Sbjct: 1 MRVDLFDFDLPPERIALRPVSPRDAARMLVVRPGATPEL--ADAHVHDLANLLQPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREK-EISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
N+T+V+ A+L+G+R ++ E + LH RV+P+ W ARP+K + GD + F
Sbjct: 59 VNDTRVVPARLDGIRRRETSQGEGVRVEAMLHKRVAPDRWLALARPAKRLAPGDRIAFGG 118
Query: 120 QDGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
+ L+ATV K GEI L F ++G L+ I+ VG IPLPPYIA KRP DA+D
Sbjct: 119 EGNACLLGTLDATVEGKGEAGEIELRFDLAGAALDEAIAAVGHIPLPPYIAAKRPDDAQD 178
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT +A +GSVAAPTAGLHFT L++RL G++ + VTLHVGAGTF+PVK +DT
Sbjct: 179 RADYQTMFAAHEGSVAAPTAGLHFTPELIARLEERGVETHRVTLHVGAGTFLPVKADDTT 238
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H MH+E G + A TA ALN+VK+RGGR++++GTT+ RL+E+A +E G ++ W G T+IF
Sbjct: 239 GHRMHAEWGEVSAETAVALNAVKARGGRVITIGTTATRLIESAASEGGRLDAWRGETDIF 298
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFR +D +++NFHLP+STL+MLV+AF G E K+ Y HAI+ YRFYSYGD LL
Sbjct: 299 ITPGYRFRFIDGMLTNFHLPRSTLVMLVAAFIGHEVQKRAYAHAIASGYRFYSYGDACLL 358
Query: 357 FQK 359
K
Sbjct: 359 LPK 361
>gi|260459151|ref|ZP_05807406.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Mesorhizobium opportunistum WSM2075]
gi|259034705|gb|EEW35961.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Mesorhizobium opportunistum WSM2075]
Length = 362
Score = 385 bits (988), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/362 (56%), Positives = 256/362 (70%), Gaps = 11/362 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRP PRDSA ++VV P + + D V DLP+ L + D +V
Sbjct: 1 MRVDLFDFDLPEERIALRPAEPRDSAGMLVVRPGET----LDDRRVGDLPSLLRAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R + ++ TLHMR++P+ W + RP K + GD +HF
Sbjct: 57 FNDTKVIPAQLKGIR--RRGEAQAQVEATLHMRMAPDRWLAFMRPGKRVAAGDRIHF-GH 113
Query: 121 DGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
DG S +L+ATVI+K GE LL F +SG L+ + VG IPLPPYIA KR D RD
Sbjct: 114 DGNSCFLGQLDATVIEKGEGGEALLGFDLSGPFLDEALHAVGHIPLPPYIASKRDDDERD 173
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT YA+ +G+VAAPTAGLHFT L + L + G++ FVTLHVGAGTF+PVK +DT
Sbjct: 174 RADYQTIYAREEGAVAAPTAGLHFTPELFAALDAKGVERRFVTLHVGAGTFLPVKADDTA 233
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
DH MH+EIG + A TA+ALN+ K+RGGRI++VGTTSLRLLE+A +DG + WSG T+IF
Sbjct: 234 DHKMHAEIGSVSAATAEALNAAKARGGRIIAVGTTSLRLLESAARDDGTLAAWSGPTDIF 293
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFR D+LM+NFHLP+STL MLVSAF G+E + Y HAI+ YRFYSYGD SLL
Sbjct: 294 ITPGYRFRTADMLMTNFHLPRSTLFMLVSAFSGLETMRAAYAHAIAERYRFYSYGDASLL 353
Query: 357 FQ 358
++
Sbjct: 354 YR 355
>gi|91977073|ref|YP_569732.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodopseudomonas palustris BisB5]
gi|123721830|sp|Q137A8|QUEA_RHOPS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|91683529|gb|ABE39831.1| Queuosine biosynthesis protein [Rhodopseudomonas palustris BisB5]
Length = 360
Score = 384 bits (987), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/363 (53%), Positives = 248/363 (68%), Gaps = 11/363 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDFDLP S IALRPV PRD+AR++VV P + + D V DLPA L D +V
Sbjct: 1 MRTELFDFDLPASSIALRPVSPRDAARMLVVRPGAT----LEDRAVRDLPALLQPGDQLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI AQL G R E I TL R+ + W +P+K + +GD++ F
Sbjct: 57 VNDTRVIAAQLTGRRIGRAT--EPRIEATLIKRLDGSRWQALVKPAKKLAEGDVVRF-GH 113
Query: 121 DGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
DG+ L+ATV K + GE+ L F+ G L++ I+ +G PLPPYIA KR D +D
Sbjct: 114 DGRVCLLGHLDATVEAKGDAGEVTLAFTFHGPALDQAIAELGATPLPPYIASKRTPDDQD 173
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT +A +G+VAAPTAGLHFT L + L + G+ ++ +TLHVGAGTF+PVKV+DT
Sbjct: 174 AADYQTMFAANEGAVAAPTAGLHFTPELDAALKARGVTLHRLTLHVGAGTFLPVKVDDTA 233
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+H MH+E G I TA ALN+ +++GGRIV+VGTTSLRLLE+A EDG I P++ T IF
Sbjct: 234 EHKMHAEWGTISEATADALNAARAQGGRIVAVGTTSLRLLESAAREDGTIAPFADETAIF 293
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFRAVD LM+NFHLP+STL MLVSAFCG+E + Y+HAI YRFYSYGD SLL
Sbjct: 294 ITPGYRFRAVDALMTNFHLPRSTLFMLVSAFCGLETMQAAYRHAIDSGYRFYSYGDASLL 353
Query: 357 FQK 359
F++
Sbjct: 354 FRE 356
>gi|209885349|ref|YP_002289206.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Oligotropha
carboxidovorans OM5]
gi|226713845|sp|B6JFC2|QUEA_OLICO RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|209873545|gb|ACI93341.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Oligotropha
carboxidovorans OM5]
Length = 361
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/362 (52%), Positives = 248/362 (68%), Gaps = 11/362 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M FDFDLPP IALRP PRDSARL++V PN+ + DH V DLP L D IV
Sbjct: 1 MRTDLFDFDLPPECIALRPAEPRDSARLLLVRPNVG----VEDHSVRDLPGLLAPGDQIV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI AQL+G R + E I TL R+ + W RP++ + +GD+L F
Sbjct: 57 VNDTKVIAAQLSGRRIGGTS--EPHIDVTLIKRIDGSRWQALVRPARKLSEGDVLRF-GN 113
Query: 121 DGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
+G+ L+A+V K GE+ L F+ G L++ I+ +G PLPPYIA +R D +D
Sbjct: 114 EGRVCLLGNLDASVEAKGEAGEVTLAFAFHGPVLDQAIADLGAPPLPPYIASRRAPDDKD 173
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT +AK +G+VAAPTAGLHFT L + L + GI + +TLHVGAGTF+PVK +DTD
Sbjct: 174 VGDYQTMFAKNEGAVAAPTAGLHFTPALEAALAARGIGIQRLTLHVGAGTFLPVKADDTD 233
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
DH MHSE G + TA+ LN +++GGR+V+VG+TS+RLLE+A TEDGII P++G T IF
Sbjct: 234 DHKMHSEWGTVSEETAKTLNEARAKGGRVVAVGSTSMRLLESAATEDGIIQPFTGETAIF 293
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGY+FRAVD++M+NFHLP+STL MLVSAF G++ + Y HAI+ YRFYSYGD LL
Sbjct: 294 ITPGYKFRAVDVMMTNFHLPRSTLFMLVSAFSGLDTMRAAYAHAIAKGYRFYSYGDACLL 353
Query: 357 FQ 358
F+
Sbjct: 354 FR 355
>gi|118589194|ref|ZP_01546601.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Stappia
aggregata IAM 12614]
gi|118438523|gb|EAV45157.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Stappia
aggregata IAM 12614]
Length = 357
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/357 (55%), Positives = 247/357 (69%), Gaps = 6/357 (1%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDFDLP RIALRP PRDSAR++VV P PL +SD V DLP L DA+V
Sbjct: 1 MRVDQFDFDLPNERIALRPARPRDSARMLVVRPG-EQPL-LSDAGVRDLPQLLEPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI AQL G R I TLHMR P+ W + RP+K ++ GD + F +
Sbjct: 59 FNDTRVIPAQLEGTRLR--GDISAGIGATLHMRTGPDRWKAFVRPAKKLQLGDTVLF--E 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+RL A V +K +GE+LL F SG +L+ I+ VG IPLPPYIA+KR D +D DY
Sbjct: 115 GFGTRLTAEVTEKGYSGEVLLTFDRSGPDLDVAIASVGHIPLPPYIAQKRGEDDQDRKDY 174
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHFT LL L GI+ + VTLHVGAGTF+PVK EDT DH M
Sbjct: 175 QTIFAEKDGAVAAPTAGLHFTPELLQALSYRGIEQHRVTLHVGAGTFLPVKAEDTADHKM 234
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G + TA AL +VK RG ++VSVGTTSLR+LE++ + G+I ++G T+IFITPG
Sbjct: 235 HAEWGEVSEETAAALLAVKVRGNKVVSVGTTSLRILESSAQKTGVITAFAGETSIFITPG 294
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YRF+A+D LM+NFHLP+STL MLVSA G++ + Y HAIS YRFYSYGD SLLF
Sbjct: 295 YRFKAIDALMTNFHLPRSTLFMLVSALSGLDTMRHAYAHAISQEYRFYSYGDASLLF 351
>gi|300023678|ref|YP_003756289.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Hyphomicrobium denitrificans ATCC 51888]
gi|299525499|gb|ADJ23968.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Hyphomicrobium denitrificans ATCC 51888]
Length = 370
Score = 382 bits (980), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/365 (55%), Positives = 245/365 (67%), Gaps = 11/365 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHP-NLSCP---LVISDHLVSDLPAFLNSN 56
M FDF+LP S IALRP PRDSARL+VVHP C +SD V DLP LN
Sbjct: 1 MRTDLFDFELPDSAIALRPAEPRDSARLLVVHPVKGGCARDDAELSDKTVRDLPGLLNPG 60
Query: 57 DAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
DA+VFN+T+VI A L+GVR + ++ L +V +SW +ARP+K ++ GD +H
Sbjct: 61 DALVFNDTRVIPAALSGVR--TRGDVQAKVDFNLTKQVGDSSWRAFARPAKRLEVGDRVH 118
Query: 117 FFSQDGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
F G+S L+ATV K GE+ L F SG L+ I VG +PLPPYIA KR
Sbjct: 119 F-GHSGESCFLGALDATVSAKGEAGEVELAFDYSGSILDDAIRAVGVMPLPPYIALKRGA 177
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D RD YQT YAK G+VAAPTAGLHFT L + L + GI +FVTLHVG GTF+PVK
Sbjct: 178 DDRDRQSYQTVYAKNDGAVAAPTAGLHFTPELFAALDARGISRHFVTLHVGPGTFLPVKA 237
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+DT +H MHSE G I A TA ALN ++RGGRIV+VGTTSLR+LE+A +DG I WSG
Sbjct: 238 DDTSEHKMHSEWGEISAETAAALNETRARGGRIVAVGTTSLRVLESAAGDDGSIPAWSGD 297
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFITPGYRF+A+D LM+NFHLP+STL MLV+AF G+ + Y HAI YRFYSYGD
Sbjct: 298 TSIFITPGYRFKAIDALMTNFHLPRSTLFMLVAAFSGLGTMRAAYGHAIHSGYRFYSYGD 357
Query: 353 TSLLF 357
SLLF
Sbjct: 358 ASLLF 362
>gi|85716503|ref|ZP_01047474.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Nitrobacter
sp. Nb-311A]
gi|85696692|gb|EAQ34579.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Nitrobacter
sp. Nb-311A]
Length = 371
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/365 (54%), Positives = 246/365 (67%), Gaps = 13/365 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M FDF+LP IALRP PR+SAR++VVHP + D VSDLP +L D +V
Sbjct: 12 MRTDLFDFELPAESIALRPASPRNSARMLVVHPGTR----LHDQRVSDLPEWLRPGDQLV 67
Query: 61 FNNTKVITAQLNGVRFCHINRR-EKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
N+T+VI AQL+G R I R E I TL R+ + WS RP+K + GD++ F
Sbjct: 68 VNDTRVIAAQLHGRR---IGREAEPRIDATLIKRLDGSRWSALVRPAKKLVAGDVVRF-G 123
Query: 120 QDGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
DG+ L+A V K GE+ FS G L+R I+ +G+ PLPPYIA KR D +
Sbjct: 124 NDGRVCFLGHLDAQVESKGEEGEVTFAFSFHGPTLDRAIAELGSTPLPPYIASKRAPDDQ 183
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D DYQT +A +G+VAAPTAGLHFT + + L G+ ++ +TLHVGAGTF+PVK EDT
Sbjct: 184 DAADYQTMFAAHEGAVAAPTAGLHFTPVIETALRERGVGLHRITLHVGAGTFLPVKAEDT 243
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
H MHSE G I A TA ALN+ +SRGGRIV+VGTTSLRLLE+A EDG I P++G T I
Sbjct: 244 AGHRMHSEWGTISAETADALNTARSRGGRIVAVGTTSLRLLESAAAEDGRIAPFTGETAI 303
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFRA+DILM+NFHLP+STL MLVSAF G++ K+ Y HAI+ YRFYSYGD L
Sbjct: 304 FITPGYRFRAIDILMTNFHLPRSTLFMLVSAFSGLKTMKQAYAHAIAAGYRFYSYGDACL 363
Query: 356 LFQKR 360
LF +R
Sbjct: 364 LFPER 368
>gi|170746470|ref|YP_001752730.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Methylobacterium radiotolerans JCM 2831]
gi|238688890|sp|B1M584|QUEA_METRJ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|170652992|gb|ACB22047.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Methylobacterium radiotolerans JCM 2831]
Length = 354
Score = 378 bits (971), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/357 (56%), Positives = 249/357 (69%), Gaps = 11/357 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP + IALRP PRD+ R++VV P PLV D V DLP L + DA+V
Sbjct: 1 MRVDLFDFELPETSIALRPAEPRDAGRMLVVRPG--APLV--DRTVRDLPDALRAGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+LNGVR + LH+R +P+ W +ARP+K + GD L F
Sbjct: 57 FNDTRVIPARLNGVR-TRPGAPGQRTEVMLHLREAPDRWRAFARPAKRLTAGDALRF--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L ATV++K GEI+L F +G EL+ I+ G +PLPPYIA KR DARD DY
Sbjct: 113 ---GDLTATVLEKAEAGEIVLAFDRAGPELDAAIAAEGALPLPPYIAGKRATDARDATDY 169
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF+ LL+ L + G++ + VTLHVGAGTF+PVK EDTD H M
Sbjct: 170 QTVYARNPGAVAAPTAGLHFSDALLADLDAAGLQRHHVTLHVGAGTFLPVKAEDTDGHRM 229
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+EIG +DA TA ALN+ ++ GGRIV+VGTT+LRLLE+A DG + P+SG T IFITPG
Sbjct: 230 HAEIGILDAATADALNAARAAGGRIVAVGTTALRLLESAARPDGTLAPFSGPTEIFITPG 289
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YRFRAVD L++NFHLP+STL MLVSAF G+E + Y HAI YRFYSYGD SLLF
Sbjct: 290 YRFRAVDALVTNFHLPRSTLFMLVSAFSGLETMRAAYAHAIGAGYRFYSYGDASLLF 346
>gi|197104869|ref|YP_002130246.1| S-adenosylmethionine tRNA ribosyltransferase [Phenylobacterium
zucineum HLK1]
gi|238690135|sp|B4R9Q3|QUEA_PHEZH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|196478289|gb|ACG77817.1| S-adenosylmethionine tRNA ribosyltransferase [Phenylobacterium
zucineum HLK1]
Length = 357
Score = 378 bits (971), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/362 (52%), Positives = 240/362 (66%), Gaps = 10/362 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IALRP PRD+ARL++V P D V DLP L + D +V
Sbjct: 1 MKLADFDFDLPEEAIALRPANPRDAARLLLVEPGQD----FRDLAVRDLPGLLRAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L GVR +R + TLH R + + W+ + RP K + GD + F
Sbjct: 57 LNDTRVIPARLKGVRTREGSR--VAVEATLHQRKAGHVWTAFMRPGKRLAPGDRVSFGET 114
Query: 121 DGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
D ++ L+ATV +K GE+ L F +SG +L+ I+ G +PLPPYIA KR D +D
Sbjct: 115 DDRACFLGALDATVKEKGEGGEVTLAFDLSGPDLDAAIAERGAMPLPPYIAAKRAEDEQD 174
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT YA+ GSVAAPTAGLHFT LL+RL G+ VTLHVGAGTF+PVK ED
Sbjct: 175 RADYQTVYAEEDGSVAAPTAGLHFTPELLARLAQAGVTTERVTLHVGAGTFLPVKTEDIS 234
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+H MH+E G +DA TA LN+ ++ GGRIV VGTTSLRLLE+A EDG++ P+ T IF
Sbjct: 235 EHRMHAEWGEVDAATADRLNAARAAGGRIVCVGTTSLRLLESAAGEDGVVRPFRDETAIF 294
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFRA D LM+NFHLPKSTL MLV AF G + + Y+HAI YRFYSYGD+SLL
Sbjct: 295 ITPGYRFRAADGLMTNFHLPKSTLFMLVCAFAGTDTMRAAYRHAIETGYRFYSYGDSSLL 354
Query: 357 FQ 358
++
Sbjct: 355 WR 356
>gi|217979658|ref|YP_002363805.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Methylocella silvestris BL2]
gi|254764284|sp|B8EIV1|QUEA_METSB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|217505034|gb|ACK52443.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylocella silvestris BL2]
Length = 361
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/359 (51%), Positives = 243/359 (67%), Gaps = 8/359 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDFDLP + IALRP PRD+ARL+VV P P + D + DLP L + D +V
Sbjct: 1 MRVDQFDFDLPDASIALRPAHPRDAARLLVVRPGRLSPAALDDRFIRDLPELLAAGDVLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREK--EISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L+G R R E I TLH R + W + RP+K ++ G+ + F
Sbjct: 61 VNDTRVIPARLDGFR----ARGEALARIEATLHKREGGDLWRAFLRPAKKLRAGETILFS 116
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
S G ++L A V++K GE+LL F +SG EL+ + VG +PLPPYI+ KR D D
Sbjct: 117 S--GDAKLAARVVEKGEDGEVLLGFELSGAELDLALERVGRMPLPPYISSKRGADESDAA 174
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A G+VAAPTA LHFT LL+ L++ G+++ VTLHVGAGTF+PVK EDTDDH
Sbjct: 175 DYQTLFADRPGAVAAPTASLHFTPALLAALVAKGVQIERVTLHVGAGTFLPVKAEDTDDH 234
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A TA ALN+ + G R+V+ GTTSLR+LE+A DG + +SG T+IFIT
Sbjct: 235 RMHAEWGEVSAETAGALNAARRAGRRVVAAGTTSLRILESAAGPDGAVAAFSGDTSIFIT 294
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY F+AVD+L++NFHLP+STL MLV AF G++ + Y HAI+ YRFYSYGD LL+
Sbjct: 295 PGYSFKAVDLLLTNFHLPRSTLFMLVCAFSGLQTMRDAYNHAIAAGYRFYSYGDACLLY 353
>gi|167646153|ref|YP_001683816.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Caulobacter
sp. K31]
gi|189038513|sp|B0T8H5|QUEA_CAUSK RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|167348583|gb|ABZ71318.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Caulobacter sp. K31]
Length = 373
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/366 (54%), Positives = 250/366 (68%), Gaps = 12/366 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP + IALRP PRDSARL+VV P + D +V DLP FL DA+V
Sbjct: 1 MRLSDFDFHLPDAAIALRPAEPRDSARLLVVRPGEG----LEDRIVRDLPDFLRPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHI----NRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
FN+T+VI A+L G R + + TLH R++P+ W + RP K +K+GD +
Sbjct: 57 FNDTRVIPARLMGRRAGRETGGGDGSPVAVEATLHRRIAPDRWVAFMRPGKRLKEGDRIA 116
Query: 117 F-FSQDGQSR---LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
F QD + L+ATVI K GEI L F +G++L+ ++ G +PLPPYIA KR
Sbjct: 117 FGHDQDRACQAGMLDATVIAKHEGGEIELAFDFAGVDLDLAVAAHGEMPLPPYIAAKRAE 176
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D RD DYQT YA+ GSVAAPTAGLHFTS+LL RL + G+ ++FVTLHVGAGTF+PVK
Sbjct: 177 DDRDRADYQTVYAREDGSVAAPTAGLHFTSDLLERLKAGGVSLHFVTLHVGAGTFLPVKT 236
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+ DH MH+E G + A A ALN+ ++ GGRIV VGTTSLRLLE+AT ED II P++
Sbjct: 237 DVVADHKMHAEFGEVPAAVADALNAARAAGGRIVCVGTTSLRLLESATGEDRIIKPFADE 296
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T IFITPGYRFRA D+LM+NFHLPKSTL MLVSAF G K Y+HAI+ YRFYSYGD
Sbjct: 297 TAIFITPGYRFRAADVLMTNFHLPKSTLFMLVSAFAGQATMKAAYEHAIAAGYRFYSYGD 356
Query: 353 TSLLFQ 358
SLLF+
Sbjct: 357 GSLLFR 362
>gi|75675988|ref|YP_318409.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Nitrobacter
winogradskyi Nb-255]
gi|91207388|sp|Q3SRN4|QUEA_NITWN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|74420858|gb|ABA05057.1| Queuosine biosynthesis protein [Nitrobacter winogradskyi Nb-255]
Length = 360
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/365 (53%), Positives = 244/365 (66%), Gaps = 13/365 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M FDF+LP IALRP PRDSAR++VV P + D VSDLP +L D +V
Sbjct: 1 MRTDLFDFELPAGSIALRPASPRDSARMLVVQPGSG----VRDQQVSDLPEWLRPGDQLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRR-EKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
N+T+VI AQL+G R I R E I TL R+ + WS RP++ + GDI+
Sbjct: 57 VNDTRVIAAQLHGRR---IGREAEPRIDATLIKRLDGSRWSALVRPARKLMAGDIVRL-G 112
Query: 120 QDGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
+G+ L+A V K GE+ FS G L++ I+ +G+ PLPPYIA KR D R
Sbjct: 113 NEGRVCFLGHLDARVESKGEEGEVTFAFSFHGPMLDQAIAELGSTPLPPYIASKRAPDDR 172
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D DYQT +A +G+VAAPTAGLHFT + + L G+ ++ +TLHVGAGTF+PVKV+DT
Sbjct: 173 DASDYQTMFATHEGAVAAPTAGLHFTPEIETALRGRGVGLHRITLHVGAGTFLPVKVDDT 232
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
H MHSE G I TA ALN+ +SRGGRIV+VGTTSLRLLE+A +DG I P++G T I
Sbjct: 233 AGHRMHSEWGAISTETADALNAARSRGGRIVAVGTTSLRLLESAADDDGRIKPFTGETAI 292
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPG+RFRAVDILM+NFHLP+STL MLVSAF G+E K+ Y HAIS YRFYSYGD L
Sbjct: 293 FITPGHRFRAVDILMTNFHLPRSTLFMLVSAFSGLETMKQAYAHAISAGYRFYSYGDACL 352
Query: 356 LFQKR 360
LF +R
Sbjct: 353 LFPER 357
>gi|299133970|ref|ZP_07027164.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Afipia sp.
1NLS2]
gi|298591806|gb|EFI52007.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Afipia sp.
1NLS2]
Length = 361
Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/361 (52%), Positives = 242/361 (67%), Gaps = 11/361 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M FDFDLPP IALRPV PR+SARL+VV P + D+ V DLP L + D +V
Sbjct: 1 MRTDLFDFDLPPESIALRPVEPRESARLLVVRPGDG----LDDYTVRDLPDLLRAGDQLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI AQL G R E I TL RV + W RP++ + +GD++ F
Sbjct: 57 VNDTKVIAAQLAGRRVGGAT--EPRIDVTLIKRVDGSRWQALVRPARKLAEGDVVRF-GN 113
Query: 121 DGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
+G+ L+ATV K GEI L F+ G L++ I+ +G PLPPYIA +R D +D
Sbjct: 114 EGRVCLLGNLDATVEAKGEAGEITLSFAFHGPVLDQAIADLGAPPLPPYIASRRAPDEKD 173
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT +AK +G+VAAPTAGLHFT L + L + GI V +TLHVGAGTF+PVK +DT
Sbjct: 174 VGDYQTMFAKHEGAVAAPTAGLHFTPALEAALQARGIGVQRLTLHVGAGTFLPVKTDDTA 233
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
DH MH+E G I A TA+ LN +++GGRIV+VG+T++RLLE+A E+G I P++G T IF
Sbjct: 234 DHKMHAEWGTISAETARTLNEARAKGGRIVAVGSTAMRLLESAADENGTIQPFTGETAIF 293
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFRAVD++M+NFHLP+STL MLVSAF G+E + Y HAI YRFYSYGD LL
Sbjct: 294 ITPGYRFRAVDVMMTNFHLPRSTLFMLVSAFSGLETMQAAYAHAIEKGYRFYSYGDACLL 353
Query: 357 F 357
F
Sbjct: 354 F 354
>gi|148255729|ref|YP_001240314.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bradyrhizobium sp. BTAi1]
gi|166216702|sp|A5EJR4|QUEA_BRASB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|146407902|gb|ABQ36408.1| S-adenosylmethionine [Bradyrhizobium sp. BTAi1]
Length = 364
Score = 372 bits (954), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/363 (52%), Positives = 242/363 (66%), Gaps = 11/363 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M FDF LPP IALRP PR++AR++VV + V+ D +V+DLP +L D +V
Sbjct: 1 MRTDLFDFHLPPENIALRPASPREAARMLVVQGDG----VLRDRIVADLPDWLEPGDQLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI AQL+G R E +I TL R+ + W RP+K + GD + F
Sbjct: 57 VNDTKVIAAQLSGRRVS--RETEAKIEATLIKRLDGSRWQALVRPAKKLAPGDTIRF-GH 113
Query: 121 DGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
+G+ L+ATV K GE+ L F G L++ I+ +G PLPPYIA KRP D +D
Sbjct: 114 EGKVCLLGHLDATVEAKGEEGEVTLSFVFHGPALDQAIADLGRPPLPPYIAGKRPADEQD 173
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT +A +G+VAAPTAGLHFT L RL + G+ + VTLHVGAGTF+PVKVEDT+
Sbjct: 174 AADYQTMFAAKEGAVAAPTAGLHFTPALEQRLRARGVGLQRVTLHVGAGTFLPVKVEDTE 233
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H MH+E G + A TA ALN +++GGRIV+VGTTS+RLLE+A DG I P+ T+IF
Sbjct: 234 GHRMHAEWGSLSAETAAALNEARAKGGRIVAVGTTSMRLLESAALPDGTIAPFEAETSIF 293
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFRAVDILM+NFHLP+STL MLVSAF G+E + Y HAI YRFYSYGD LL
Sbjct: 294 ITPGYRFRAVDILMTNFHLPRSTLFMLVSAFAGLETMQAAYAHAIRSGYRFYSYGDACLL 353
Query: 357 FQK 359
F++
Sbjct: 354 FRQ 356
>gi|154248190|ref|YP_001419148.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Xanthobacter autotrophicus Py2]
gi|238686741|sp|A7IN97|QUEA_XANP2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|154162275|gb|ABS69491.1| Queuosine biosynthesis protein [Xanthobacter autotrophicus Py2]
Length = 362
Score = 371 bits (953), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/362 (50%), Positives = 244/362 (67%), Gaps = 6/362 (1%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP IALRP PRD+AR++VV P + L SD V DLP F+ +NDA+V
Sbjct: 1 MRVDAFDFDLPEEHIALRPAEPRDAARMLVVRPGGAPEL--SDLKVRDLPDFITANDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A L GVR I L R+ + W +A+P K ++ GD + F +
Sbjct: 59 VNDTRVIPAALEGVR-ERDGGSAVRIEANLIKRLDASRWQAFAKPGKRLRVGDRVRFGGE 117
Query: 121 DGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+A + K + G ++L F ++G L+ ++ VG +P+PPYIA +R D RD
Sbjct: 118 GSACLLGALDAQIAAKEDDGSVILAFDLAGTALDEAVTAVGHMPIPPYIAARRAEDDRDR 177
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT +A++ GSVAAPTA LHFT L++R+ + G ++ VTLHVGAGTF+PVK EDT
Sbjct: 178 ADYQTLFARVSGSVAAPTASLHFTPELMARIAATGASMHTVTLHVGAGTFLPVKAEDTTG 237
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+E G + A TA ALN+VK++GGRI +VG+TS RL+E+AT EDG I P+ G T+IFI
Sbjct: 238 HRMHAEWGEVSADTAAALNAVKAKGGRIFTVGSTSTRLIESATGEDGTIRPFVGETDIFI 297
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFRAVD +++NFHLP+STL+MLV+AF G E K+ Y HAI+ YRFYSYGD LL
Sbjct: 298 TPGYRFRAVDGMLTNFHLPRSTLVMLVAAFVGHEAQKRAYAHAIAAGYRFYSYGDACLLL 357
Query: 358 QK 359
+
Sbjct: 358 PE 359
>gi|91207399|sp|Q6N6L0|QUEA_RHOPA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
Length = 360
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/364 (54%), Positives = 252/364 (69%), Gaps = 13/364 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDFDLP IALRPV PRD+AR++VV P PL D +V DLPA L D +V
Sbjct: 1 MRTELFDFDLPAENIALRPVSPRDAARMLVVRPG--APL--EDRIVRDLPALLAPGDQLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRR-EKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
N+T+VI AQL G R I R E +I TL R+ W +P+K + GD++ F
Sbjct: 57 VNDTRVIAAQLTGRR---IGRGLEPKIEATLIKRLDGARWQALVKPAKKLLPGDVVRF-G 112
Query: 120 QDGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
DG+ L+ATV K + GE+ LVFS G L++ I+ VG PLPPYIA KR DA+
Sbjct: 113 HDGRVCLLGHLDATVEAKGDAGEVTLVFSFHGPVLDQAIAEVGATPLPPYIASKRAPDAQ 172
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D DYQT +A +G+VAAPTAGLHFT+ L + L + G+ ++ +TLHVGAGTF+PVK EDT
Sbjct: 173 DIADYQTMFASNEGAVAAPTAGLHFTAELETALAACGVGLHRITLHVGAGTFLPVKAEDT 232
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+H MH+E G I + TA+ALN+ ++ GGRIV+VGTTSLRLLE+A +DG I P++ T+I
Sbjct: 233 SEHRMHAEWGTISSGTAEALNAARAAGGRIVAVGTTSLRLLESAARDDGRIAPFADETSI 292
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFRAVD+LM+NFHLP+STL MLVSAFCG++ + Y HAI YRFYSYGD SL
Sbjct: 293 FITPGYRFRAVDVLMTNFHLPRSTLFMLVSAFCGLDTMQAAYAHAIRTGYRFYSYGDASL 352
Query: 356 LFQK 359
LF+
Sbjct: 353 LFRN 356
>gi|39935671|ref|NP_947947.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodopseudomonas palustris CGA009]
gi|39649524|emb|CAE28046.1| S-adenosylmethionine tRNA ribosyltransferase [Rhodopseudomonas
palustris CGA009]
Length = 364
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/364 (54%), Positives = 252/364 (69%), Gaps = 13/364 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDFDLP IALRPV PRD+AR++VV P PL D +V DLPA L D +V
Sbjct: 5 MRTELFDFDLPAENIALRPVSPRDAARMLVVRPG--APL--EDRIVRDLPALLAPGDQLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRR-EKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
N+T+VI AQL G R I R E +I TL R+ W +P+K + GD++ F
Sbjct: 61 VNDTRVIAAQLTGRR---IGRGLEPKIEATLIKRLDGARWQALVKPAKKLLPGDVVRF-G 116
Query: 120 QDGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
DG+ L+ATV K + GE+ LVFS G L++ I+ VG PLPPYIA KR DA+
Sbjct: 117 HDGRVCLLGHLDATVEAKGDAGEVTLVFSFHGPVLDQAIAEVGATPLPPYIASKRAPDAQ 176
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D DYQT +A +G+VAAPTAGLHFT+ L + L + G+ ++ +TLHVGAGTF+PVK EDT
Sbjct: 177 DIADYQTMFASNEGAVAAPTAGLHFTAELETALAACGVGLHRITLHVGAGTFLPVKAEDT 236
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+H MH+E G I + TA+ALN+ ++ GGRIV+VGTTSLRLLE+A +DG I P++ T+I
Sbjct: 237 SEHRMHAEWGTISSGTAEALNAARAAGGRIVAVGTTSLRLLESAARDDGRIAPFADETSI 296
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFRAVD+LM+NFHLP+STL MLVSAFCG++ + Y HAI YRFYSYGD SL
Sbjct: 297 FITPGYRFRAVDVLMTNFHLPRSTLFMLVSAFCGLDTMQAAYAHAIRTGYRFYSYGDASL 356
Query: 356 LFQK 359
LF+
Sbjct: 357 LFRN 360
>gi|90424090|ref|YP_532460.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodopseudomonas palustris BisB18]
gi|90106104|gb|ABD88141.1| Queuosine biosynthesis protein [Rhodopseudomonas palustris BisB18]
Length = 379
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/359 (52%), Positives = 248/359 (69%), Gaps = 11/359 (3%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
FDF+LP + IALRP PRD+ARL+VV P + + D +V DLP +L DA+V N+T+
Sbjct: 27 FDFELPATAIALRPAQPRDAARLLVVRPGAA----LHDGVVRDLPDWLAPGDALVVNDTR 82
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQ-- 123
VI AQL+G R + E +I TL R+ + W + +K + +GD++ F DG+
Sbjct: 83 VIAAQLSGRRIGRDS--EAKIEATLIKRLDGSRWQALVKGAKKLNEGDVVRF-GHDGRVC 139
Query: 124 --SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+L+ATV K GEI L FS G L++ I+ +G PLPPYIA KR D RD DYQ
Sbjct: 140 LLGQLDATVEHKGEAGEITLSFSFHGPTLDQAIAELGAPPLPPYIASKRAPDDRDAADYQ 199
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A +G+VAAPTAGLHFT L + L + G+ ++ VTLHVGAGTF+PVKV+DT+DH MH
Sbjct: 200 TMFAAHEGAVAAPTAGLHFTPELEAALAARGVSIHRVTLHVGAGTFLPVKVDDTEDHKMH 259
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
+E G I TA ALN+V ++G RIV+VG+TSLRLLE+A +DG I P++ T IFITPGY
Sbjct: 260 AEWGTISRATADALNAVHAKGCRIVAVGSTSLRLLESAAADDGSIQPFADDTAIFITPGY 319
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
RF+AVD++M+NFHLP+STL MLVSAF G E ++ Y HAI+ YRFYSYGD LLF +R
Sbjct: 320 RFKAVDLMMTNFHLPRSTLFMLVSAFAGRETMQRAYAHAIATGYRFYSYGDACLLFPER 378
>gi|328543843|ref|YP_004303952.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Polymorphum gilvum SL003B-26A1]
gi|326413587|gb|ADZ70650.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Polymorphum gilvum SL003B-26A1]
Length = 365
Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/365 (54%), Positives = 250/365 (68%), Gaps = 17/365 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLPP RIALRP PRD+ARL+VV P S L +D V DL L DA+V
Sbjct: 1 MRVDVFDFDLPPERIALRPARPRDAARLLVVRPGQSPEL--ADCGVRDLARELEPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREK--EISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
FN+T+VI AQL G R R E I TLH+R + W + RP+K + GD + F
Sbjct: 59 FNDTRVIPAQLEGTR----TRGEAVAGIGATLHLRAGADRWWAFVRPAKKLAVGDRVRF- 113
Query: 119 SQDGQSR------LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
G+ R L+ATV DK ++GE+LL F ++G +L++ I+ VG IPLPPYIA +R
Sbjct: 114 --GGEGRACLLGTLDATVADKRDSGEVLLAFDLAGPDLDQAIAAVGHIPLPPYIAARRGE 171
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D +D DYQT +A G+VAAPTAGLHFT L+ L + GI+ + VTLHVGAGTF+PVK
Sbjct: 172 DEQDRSDYQTMFADKDGAVAAPTAGLHFTPALIEALDARGIERHTVTLHVGAGTFLPVKA 231
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
EDT DH MH+E G + A TA AL +V++RG R+V+VGTTSLR+LE+A + +SG
Sbjct: 232 EDTADHRMHAEWGKVSAATAAALKAVRARGNRVVAVGTTSLRILESAAQGADGLTAFSGE 291
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFITPGYRFRAVD+LM+NFHLP+STL MLVSAF G++ ++ Y HAI+ YRFYSYGD
Sbjct: 292 TSIFITPGYRFRAVDVLMTNFHLPRSTLFMLVSAFSGLQTMRRAYAHAIASGYRFYSYGD 351
Query: 353 TSLLF 357
LLF
Sbjct: 352 ACLLF 356
>gi|323136311|ref|ZP_08071393.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylocystis sp. ATCC 49242]
gi|322398385|gb|EFY00905.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylocystis sp. ATCC 49242]
Length = 359
Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/362 (51%), Positives = 238/362 (65%), Gaps = 10/362 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP RIALRP PRDSAR++VV P D V DLPA L DA+V
Sbjct: 1 MRVDLFDFELPQDRIALRPANPRDSARMLVV-PGKGA---FEDKSVRDLPACLRGGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L+G R + TL R+ + W RP+K + GD++ F +
Sbjct: 57 VNDTRVIHARLSGRRL--RGELSAGVEATLIERLDASRWRALMRPAKKLAIGDLIRFGRE 114
Query: 121 DG----QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
G Q L+A V + + GE+ L F +SG L+ I + G +PLPPYIA KR DA D
Sbjct: 115 GGEACLQGALDARVEGRGDAGEVTLAFDLSGASLDEAIEVAGEMPLPPYIAGKRAADASD 174
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT +A+ G+VAAPTAGLHFT NLL+ + + G++++ VTLHVGAGTF+PVK +DT
Sbjct: 175 ETDYQTVFAREAGAVAAPTAGLHFTPNLLAAVEARGVQLHRVTLHVGAGTFLPVKADDTG 234
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H MH E ID+ TA ALN ++RGGRIV+VGTT+LR+LE+A DG + P++ T IF
Sbjct: 235 SHRMHEEFARIDSGTAAALNEARARGGRIVAVGTTALRVLESAAAPDGRLAPYAQRTGIF 294
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFRA D+L++NFHLP+STL MLVSAF G+E K Y HAI YRFYSYGD LL
Sbjct: 295 ITPGYRFRATDMLLTNFHLPRSTLFMLVSAFSGLERMKAAYAHAIEDGYRFYSYGDACLL 354
Query: 357 FQ 358
+
Sbjct: 355 HR 356
>gi|192291253|ref|YP_001991858.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodopseudomonas palustris TIE-1]
gi|238692597|sp|B3QIN0|QUEA_RHOPT RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|192285002|gb|ACF01383.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Rhodopseudomonas palustris TIE-1]
Length = 360
Score = 368 bits (944), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/364 (54%), Positives = 252/364 (69%), Gaps = 13/364 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDFDLP IALRPV PRD+AR++VV P S PL D +V DLPA L D +V
Sbjct: 1 MRTELFDFDLPTQNIALRPVSPRDAARMLVVRP--SVPL--EDRIVRDLPALLAPGDQLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRR-EKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
N+T+VI AQL G R I R E +I TL R+ W +P+K + GD++ F
Sbjct: 57 VNDTRVIAAQLTGRR---IGRGLEPKIEATLIKRLDGARWQALVKPAKKLLPGDVVRF-G 112
Query: 120 QDGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
DG+ L+ATV K + GE+ L FS G L++ I+ VG PLPPYIA KR DA+
Sbjct: 113 HDGRVCLLGHLDATVEAKGDAGEVTLAFSFHGPVLDQAIAEVGATPLPPYIASKRAPDAQ 172
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D DYQT +A +G+VAAPTAGLHFT+ L + L + G+ ++ +TLHVGAGTF+PVK EDT
Sbjct: 173 DIADYQTMFASNEGAVAAPTAGLHFTAELETALAARGVGLHRITLHVGAGTFLPVKAEDT 232
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+H MH+E G I + TA+ALN+ ++ GGRIV+VGTTSLRLLE+A +DG I P++ T+I
Sbjct: 233 SEHRMHAEWGTISSGTAEALNAARAAGGRIVAVGTTSLRLLESAARDDGRIAPFADETSI 292
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFRAVD+LM+NFHLP+STL MLVSAFCG++ + Y HAI YRFYSYGD SL
Sbjct: 293 FITPGYRFRAVDMLMTNFHLPRSTLFMLVSAFCGLDTMQAAYAHAIRTGYRFYSYGDASL 352
Query: 356 LFQK 359
LF+
Sbjct: 353 LFRN 356
>gi|146340922|ref|YP_001205970.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bradyrhizobium sp. ORS278]
gi|166216703|sp|A4YV19|QUEA_BRASO RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|146193728|emb|CAL77745.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bradyrhizobium sp. ORS278]
Length = 364
Score = 366 bits (940), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 190/363 (52%), Positives = 238/363 (65%), Gaps = 11/363 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M FDF LPP IALRP PR++AR++VV + V+ D + DLP +L D +V
Sbjct: 1 MRTDLFDFHLPPENIALRPASPREAARMLVVQGDG----VLRDRTIGDLPDWLEPGDQLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI AQL+G R E +I TL R+ + W RP+K + GD + F
Sbjct: 57 VNDTKVIAAQLSGRRIS--RETEAKIEATLIKRLDGSRWQALVRPAKKLLAGDTIRF-GN 113
Query: 121 DGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
+G+ L+ATV K GE+ L F G L++ I+ +G PLPPYIA KRP D +D
Sbjct: 114 EGKVCLLGHLDATVEAKGEEGEVTLSFVFHGPALDQAIADLGRPPLPPYIAGKRPADEQD 173
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT +A +G+VAAPTAGLHFT L RL + G+ + VTLHVGAGTF+PVKVEDT+
Sbjct: 174 AQDYQTMFAAKEGAVAAPTAGLHFTPALEQRLRARGVGLQRVTLHVGAGTFLPVKVEDTE 233
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H MH+E G + TA ALN K+ GGRIV+VGTTS+RLLE+A DG I P+ T+IF
Sbjct: 234 GHRMHAEWGSLTPETAAALNQAKAEGGRIVAVGTTSMRLLESAALPDGTIAPFEAETSIF 293
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFRAVDILM+NFHLP+STL MLVSAF G+E + Y HAI YRFYSYGD LL
Sbjct: 294 ITPGYRFRAVDILMTNFHLPRSTLFMLVSAFAGLETMQAAYAHAIESGYRFYSYGDACLL 353
Query: 357 FQK 359
F++
Sbjct: 354 FRQ 356
>gi|92117315|ref|YP_577044.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Nitrobacter
hamburgensis X14]
gi|91800209|gb|ABE62584.1| Queuosine biosynthesis protein [Nitrobacter hamburgensis X14]
Length = 365
Score = 366 bits (939), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 194/362 (53%), Positives = 242/362 (66%), Gaps = 13/362 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M FDF+LP IALRP PRDSAR++VV P + D VSDLP +L D +V
Sbjct: 6 MRTDLFDFELPSESIALRPASPRDSARMLVVQPGAG----LHDQRVSDLPKWLRPGDQLV 61
Query: 61 FNNTKVITAQLNGVRFCHINR-REKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
N+T+VI AQL G R I R E I TL R+ + W+ +P++ + GDI+ F
Sbjct: 62 VNDTRVIAAQLRGRR---IGRDAEPRIEATLIKRLDGSRWNALVKPARKLIAGDIVRF-G 117
Query: 120 QDGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
+G+ L+A V K GE+ FS G L++ I+ +G+ PLPPYIA KR D R
Sbjct: 118 NEGRVCFLGHLDAQVESKGEEGEVTFAFSFHGPTLDQAIADLGSPPLPPYIASKREPDDR 177
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D DYQT +A +G+VAAPTAGLHFT + + L G+ ++ +TLHVGAGTF+PVK EDT
Sbjct: 178 DVADYQTMFAVHEGAVAAPTAGLHFTPAVEAVLRERGVGLHRLTLHVGAGTFLPVKTEDT 237
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
H MHSE G I A TA ALN+ ++ GGRIV+VGTTSLRLLE+AT +DG I P++G T I
Sbjct: 238 VGHRMHSEWGTISAETADALNAARASGGRIVAVGTTSLRLLESATADDGRIAPFTGETAI 297
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFRAVDILM+NFHLP+STL MLVSAF G+E K+ Y HAI+ YRFYSYGD L
Sbjct: 298 FITPGYRFRAVDILMTNFHLPRSTLFMLVSAFSGLETMKQAYAHAIAAGYRFYSYGDACL 357
Query: 356 LF 357
LF
Sbjct: 358 LF 359
>gi|329889500|ref|ZP_08267843.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Brevundimonas diminuta ATCC 11568]
gi|328844801|gb|EGF94365.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Brevundimonas diminuta ATCC 11568]
Length = 364
Score = 366 bits (939), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 197/368 (53%), Positives = 249/368 (67%), Gaps = 16/368 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP + IALRP PRDSARL+VV + ++ DLP FL DA+V
Sbjct: 1 MRTSDFDFDLPEACIALRPADPRDSARLLVVKGG-----DLQHRIIRDLPDFLQPGDALV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKE-----ISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
FN+T+VI A+L+GVR H E E + TLH R +P+ WS + +P K +K GD +
Sbjct: 56 FNDTRVIPARLSGVR--HRTAPEGELLSVPVEATLHHRDAPDVWSAFMKPGKRLKVGDRV 113
Query: 116 HFFSQDGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRP 171
F ++ + +++A + K G + L F ++G L+ I VG +PLPPYIA KR
Sbjct: 114 RFGREEDNACLLGQVDAEITAKGEDGLVTLRFDLAGPVLDDAIREVGVMPLPPYIAAKRA 173
Query: 172 IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK 231
D +D DYQT +A+ GSVAAPTAGLHFT LL + + G+ + VTLHVGAGTF+PVK
Sbjct: 174 EDDQDLKDYQTVFAEHDGSVAAPTAGLHFTPALLDAIRARGVTTHAVTLHVGAGTFLPVK 233
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSG 291
+DT DH MHSE G + A TA ALN+V++ GGRIV VGTTSLRLLE+AT EDG+I P+ G
Sbjct: 234 ADDTADHKMHSEWGEVSAETAAALNAVRAAGGRIVCVGTTSLRLLESATGEDGVIQPFHG 293
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T IFITPGYRFRA D+LM+NFHLPKSTL MLVSAF G+E + Y HAI YRFYSYG
Sbjct: 294 DTAIFITPGYRFRACDVLMTNFHLPKSTLFMLVSAFAGLETMRAAYAHAIDSGYRFYSYG 353
Query: 352 DTSLLFQK 359
D SLLF++
Sbjct: 354 DGSLLFRE 361
>gi|86749987|ref|YP_486483.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodopseudomonas palustris HaA2]
gi|86573015|gb|ABD07572.1| Queuosine biosynthesis protein [Rhodopseudomonas palustris HaA2]
Length = 384
Score = 366 bits (939), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 192/363 (52%), Positives = 247/363 (68%), Gaps = 11/363 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M FDFDLP IALRP+ PRD+AR++VV P + P D +V DLPA L D +V
Sbjct: 27 MRTDLFDFDLPAENIALRPMSPRDAARMLVVRPG-AAP---EDRVVRDLPALLQPGDQLV 82
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI AQL+G R E +I TL R+ + W +P+K + +GD++ F
Sbjct: 83 VNDTRVIAAQLSGRRIGRAT--EPKIEATLIKRLDGSRWQALVKPAKKLAEGDVVRF-GH 139
Query: 121 DGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
DG+ L+ATV K GE+ L F G L++ I+ +G PLPPYIA KR D RD
Sbjct: 140 DGRVCLLGHLDATVEVKGEAGEVTLAFCFHGPALDQAIAELGATPLPPYIASKRAPDDRD 199
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT +A +G+VAAPTAGLHFT L + L + G+ V+ VTLHVGAGTF+PVK +DT
Sbjct: 200 AADYQTMFAANEGAVAAPTAGLHFTPELDAALAARGVTVHRVTLHVGAGTFLPVKTDDTA 259
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+H MH+E G I TA ALN+ +++GGRIV+VGTTSLRLLE+A +DG I P++ T IF
Sbjct: 260 EHRMHAEWGTIGRDTAAALNAARAQGGRIVAVGTTSLRLLESAARDDGTIAPFADETAIF 319
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGY+FRAVD+LM+NFHLP+STL MLVSAFCG+E + Y+HAI YRFYSYGD SLL
Sbjct: 320 ITPGYKFRAVDVLMTNFHLPRSTLFMLVSAFCGLETMQAAYRHAIETGYRFYSYGDASLL 379
Query: 357 FQK 359
F++
Sbjct: 380 FRE 382
>gi|296445819|ref|ZP_06887771.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylosinus trichosporium OB3b]
gi|296256647|gb|EFH03722.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylosinus trichosporium OB3b]
Length = 371
Score = 365 bits (938), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 194/356 (54%), Positives = 239/356 (67%), Gaps = 11/356 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V+ FDF+LP IALRP PRDSARL+VV P+ SD VSDLP L DA+V
Sbjct: 24 MRVELFDFELPQEAIALRPASPRDSARLLVVPPDGH----FSDRSVSDLPQLLAPGDALV 79
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L+G R +R I TL RV + W RP+K + G+ + F
Sbjct: 80 VNDTQVIHARLSGFRARGESR--AHIDATLIERVGADRWRALVRPAKKLGVGESVRF--- 134
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
LEA V++K GEIL FS++G L+ + G +PLPPYIA KR DARD DY
Sbjct: 135 --AEGLEARVVEKGENGEILFAFSLAGSALDAAVEASGVMPLPPYIAGKRAADARDEADY 192
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A G+VAAPTAGLHFT L+ L + G+ ++ VTLHVGAGTF+PVK EDT +H M
Sbjct: 193 QTLFAARAGAVAAPTAGLHFTPRLVDALTARGVSLHSVTLHVGAGTFLPVKAEDTAEHRM 252
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G IDA TA ALN ++RGGRIV+VGTT+LR+LE+A DG I+P++ T IFITPG
Sbjct: 253 HAEWGAIDAATADALNETRARGGRIVAVGTTALRVLESAAGADGRISPFADRTAIFITPG 312
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRFRAVD L++NFHLP+STL MLVSAF G+E K Y HAI YRFYSYGD LL
Sbjct: 313 YRFRAVDALLTNFHLPRSTLFMLVSAFSGLERMKAAYAHAIGSGYRFYSYGDACLL 368
>gi|27379800|ref|NP_771329.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bradyrhizobium japonicum USDA 110]
gi|46577026|sp|Q89L59|QUEA_BRAJA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|27352953|dbj|BAC49954.1| S-adenosylmethionine tRNA ribosyltransferase [Bradyrhizobium
japonicum USDA 110]
Length = 366
Score = 365 bits (936), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 191/363 (52%), Positives = 242/363 (66%), Gaps = 14/363 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M FDFDLP RIALRP PRDSA+++VV + D +S+LP +L D +V
Sbjct: 1 MRTDLFDFDLPAERIALRPASPRDSAKMLVVEGG-----ALRDRTISELPQWLKRGDQLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRR-EKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
N+TKVI AQL G R I R E +I TL R+ + W +P+K + GD + F
Sbjct: 56 VNDTKVIAAQLKGRR---IGRETEPKIEATLIKRLDGSRWQALVKPAKKLIAGDRIRF-G 111
Query: 120 QDGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
+G+ L+A V K + GE+ L FS G L++ I+ +G+ PLPPYIA KR D +
Sbjct: 112 NEGKVCLLGHLDAEVEAKGSEGEVTLSFSFHGPALDQAIADLGSPPLPPYIASKRTPDDQ 171
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D+ DYQT +A +G+VAAPTAGLHFT L L G+ + VTLHVGAGTF+PVKVEDT
Sbjct: 172 DFADYQTMFAANEGAVAAPTAGLHFTPALEQALRERGVGLNRVTLHVGAGTFLPVKVEDT 231
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
H MH+E G I A TA+ LN + GGRI++VGTTSLRLLE+A +EDG I P++ T+I
Sbjct: 232 AGHKMHAEWGTISAETAERLNIARHNGGRIIAVGTTSLRLLESAASEDGTIQPFAAETSI 291
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFRAVDIL++NFHLPKSTL MLVSAF G+E ++ Y HAI+ YRFYSYGD L
Sbjct: 292 FITPGYRFRAVDILLTNFHLPKSTLFMLVSAFSGLETMRRAYAHAIAQGYRFYSYGDACL 351
Query: 356 LFQ 358
LF+
Sbjct: 352 LFR 354
>gi|316934200|ref|YP_004109182.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Rhodopseudomonas palustris DX-1]
gi|315601914|gb|ADU44449.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Rhodopseudomonas palustris DX-1]
Length = 360
Score = 364 bits (934), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 196/364 (53%), Positives = 248/364 (68%), Gaps = 13/364 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M FDFDLP IALRPV PRD+AR++VV P PL D +V DLPA L D +V
Sbjct: 1 MRTDLFDFDLPAGNIALRPVSPRDAARMLVVRPG--APL--EDRIVRDLPALLAPGDQLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRR-EKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
N+T+VI AQL G R I R E +I TL R+ W +P+K + GD++ F
Sbjct: 57 VNDTRVIAAQLAGHR---IGRGPEPKIDATLIKRLDGARWQALVKPAKKLVPGDVVRF-G 112
Query: 120 QDGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
DG+ L+ATV K GEI L FS G L++ I+ +G PLPPYIA KRP D +
Sbjct: 113 HDGRVCLLGHLDATVEAKGEAGEITLAFSFHGPVLDQAIAEIGATPLPPYIASKRPPDVQ 172
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D DYQT +A +G+VAAPTAGLHFT++L + L + G+ ++ +TLHVGAGTF+PVK EDT
Sbjct: 173 DVADYQTMFAANEGAVAAPTAGLHFTADLEAALAARGVGLHRITLHVGAGTFLPVKAEDT 232
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+H MH+E G I TA+ALN+ ++ GGRIV+VGTTSLRLLE+A +DG I ++ T+I
Sbjct: 233 AEHKMHAEWGTISRATAEALNAARAAGGRIVAVGTTSLRLLESAARDDGRIAAFADETSI 292
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFRAVD+LM+NFHLP+STL MLVSAFCG++ + Y HAI YRFYSYGD SL
Sbjct: 293 FITPGYRFRAVDVLMTNFHLPRSTLFMLVSAFCGLDTMQAAYAHAIRTGYRFYSYGDASL 352
Query: 356 LFQK 359
LF+
Sbjct: 353 LFRN 356
>gi|182679292|ref|YP_001833438.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Beijerinckia indica subsp. indica ATCC 9039]
gi|238691230|sp|B2IHG4|QUEA_BEII9 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|182635175|gb|ACB95949.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Beijerinckia indica subsp. indica ATCC 9039]
Length = 367
Score = 360 bits (923), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 185/361 (51%), Positives = 252/361 (69%), Gaps = 8/361 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLPP RIALRPV PRD++RL+VV P+ ++DH + +LP FL + D +V
Sbjct: 1 MRVDLFDFDLPPERIALRPVEPRDASRLLVVRPDSGD---MTDHGMRELPDFLRAGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L+G R +R +I TLH R W + +P+K ++ G+ + F Q
Sbjct: 58 VNDTRVIPARLHGFRSRGESR--AKIEATLHKREGEALWRAFVKPAKKLRVGETICFARQ 115
Query: 121 DGQSR---LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+ + LEA V++K GE++L F+ +G L+ + L+G +PLPPYIA KR D++D
Sbjct: 116 EPGTEVESLEAEVLEKGAEGEVVLGFNRAGAALDAALDLLGEMPLPPYIAGKRAPDSQDS 175
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
+DYQT +A G+VAAPTA LHFT L++ + + G+ + VTLHVGAGTF+PVK EDTD
Sbjct: 176 LDYQTLFANRSGAVAAPTASLHFTPRLIAAIEARGVTICKVTLHVGAGTFLPVKAEDTDA 235
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+E G + A A LN V + GGRI++ GTTSLRLLE+A EDG+I P+ G T+IF+
Sbjct: 236 HRMHAEWGEVSAEVAAFLNKVHAAGGRIIAAGTTSLRLLESAVDEDGLIQPFQGETSIFM 295
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPG+RFRAVDIL++NFHLP+STL MLV AF G+E ++ Y HAI+ +YRFYSYGD LLF
Sbjct: 296 TPGFRFRAVDILLTNFHLPRSTLFMLVCAFAGLETMRRAYAHAIAASYRFYSYGDACLLF 355
Query: 358 Q 358
+
Sbjct: 356 R 356
>gi|307293389|ref|ZP_07573235.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Sphingobium
chlorophenolicum L-1]
gi|306881455|gb|EFN12671.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Sphingobium
chlorophenolicum L-1]
Length = 342
Score = 359 bits (922), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 189/358 (52%), Positives = 232/358 (64%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLPP IALRP PRDSARL++V S + D +V DLP L D +V
Sbjct: 1 MRVDLFDFDLPPESIALRPASPRDSARLLLV----SGDALFEDRIVRDLPGLLRPGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R E I TLH R+S W + R +K ++ GD + F +
Sbjct: 57 FNDTKVIPAQLEGMRG------EARIGATLHKRLSLRQWQAFLRNAKRVRDGDRIDFGAG 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ A + G + L F G E +E + G +PLPPYIA KRP D RD D
Sbjct: 111 -----VTAIAGPRDEDGGVTLSFE--GEEPVEVLLERAGRMPLPPYIASKRPTDERDRSD 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A+ G+VAAPTA LHFT +L + L G+ +TLHVGAGTF+PVK EDTDDH
Sbjct: 164 YQTMFAREDGAVAAPTAALHFTPDLTAALAKAGVGTETLTLHVGAGTFLPVKAEDTDDHR 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH+E G ID TA LN+ + GGR+++VGTTSLRLLE+AT E G+I+P++ T IFITP
Sbjct: 224 MHAEWGRIDQATADRLNAARQAGGRLIAVGTTSLRLLESATDEHGVIHPFADETRIFITP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GYRFRAVD LM+NFHLPKSTL MLVSA G E + Y HAI+ YRFYSYGD+SLL
Sbjct: 284 GYRFRAVDGLMTNFHLPKSTLFMLVSALMGRERMQAAYAHAIAQGYRFYSYGDSSLLL 341
>gi|312116034|ref|YP_004013630.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Rhodomicrobium vannielii ATCC 17100]
gi|311221163|gb|ADP72531.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Rhodomicrobium vannielii ATCC 17100]
Length = 391
Score = 358 bits (918), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 181/355 (50%), Positives = 241/355 (67%), Gaps = 6/355 (1%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LP S IALRP PRD+ARL+ V P + P +S+ + DLPAF D +VFN
Sbjct: 30 LTDFDFELPKSAIALRPASPRDAARLLRVDP--AAPQPLSEATIRDLPAFFRPGDIMVFN 87
Query: 63 NTKVITAQLNGVRFCH-INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
+T+V++A+L+G R + ++S L R + SW +ARP++ ++ GD +HF +
Sbjct: 88 DTRVLSAELSGTRPPRDADAPAVDVSLNLIEREASGSWKAFARPARRLRPGDAIHFETGG 147
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
SRL V+ K + GEI L + G +E + G +PLPPYIAR+RP D RD DYQ
Sbjct: 148 HASRL--IVVAKSDEGEITLA-APDGDSVEAIMQRHGAMPLPPYIARQRPADERDRSDYQ 204
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A+ +G+VAAPTAGLHFT LL+RL GI+ FVTLHVGAGTF+PVK E +DH +H
Sbjct: 205 TVFARNEGAVAAPTAGLHFTPELLARLAERGIETAFVTLHVGAGTFLPVKSETVEDHEIH 264
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
+E I TA+A+N+ + RGGRI++ GTTSLR+LETAT EDG I P GFT IFI PG+
Sbjct: 265 AEWFEIGDATARAINAARERGGRIIAAGTTSLRVLETATREDGFIEPAKGFTRIFIKPGH 324
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
FR+ D+L++NFHLPKSTL MLV AF G + K+ Y HA+ +RFYSYGD LL
Sbjct: 325 CFRSADLLVTNFHLPKSTLFMLVCAFSGTDLMKRAYAHAVEAGFRFYSYGDACLL 379
>gi|148552954|ref|YP_001260536.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sphingomonas wittichii RW1]
gi|166218743|sp|A5V282|QUEA_SPHWW RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|148498144|gb|ABQ66398.1| Queuosine biosynthesis protein [Sphingomonas wittichii RW1]
Length = 344
Score = 358 bits (918), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 190/358 (53%), Positives = 237/358 (66%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLPP IALRP PRDSAR+++V + ++D VSDLP L D +V
Sbjct: 1 MRVDLFDFDLPPENIALRPASPRDSARMLLVEGSEGA---LADRHVSDLPGLLRVGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI AQL G R E I TLH R W + R +K ++ GD + F +
Sbjct: 58 FNDTRVIPAQLEG------RRGEARIGATLHKREGLRQWRAFVRNAKRVRTGDRIDFGAG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ A ++ G ILL F G E +E + GT+PLPPYIA KRP D RD D
Sbjct: 112 -----VSAIAAERGEDGSILLDFE--GDEPVELLLERAGTMPLPPYIAGKRPTDDRDRDD 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A+ +G+VAAPTA LHFT L+ L + GI +TLHVGAGTF+PVK +DTDDH
Sbjct: 165 YQTMFAREKGAVAAPTAALHFTPRLMEALAAAGIASETLTLHVGAGTFLPVKADDTDDHR 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH+E G IDA TA LN++++ GGR+++VGTTSLRLLE+AT EDG+I P+ G T IFITP
Sbjct: 225 MHAEWGRIDAATADHLNAIRAAGGRVIAVGTTSLRLLESATGEDGVIRPFDGDTAIFITP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GYRFRA+D LM+NFHLPKSTL MLVSA G + + Y HAI+ YRFYSYGD+SLL
Sbjct: 285 GYRFRAIDGLMTNFHLPKSTLFMLVSALMGRDRMQAAYAHAIAEGYRFYSYGDSSLLL 342
>gi|85373945|ref|YP_458007.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Erythrobacter litoralis HTCC2594]
gi|122544578|sp|Q2NAT1|QUEA_ERYLH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|84787028|gb|ABC63210.1| S-adenosylmethionine:tRNA-ribosyltransferase [Erythrobacter
litoralis HTCC2594]
Length = 347
Score = 358 bits (918), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 190/357 (53%), Positives = 234/357 (65%), Gaps = 18/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP IALRP PRDSARL+V + I D +V DLP L D +V
Sbjct: 1 MRVDLFDFELPQELIALRPAVPRDSARLLVA----AGAGAIDDRIVRDLPQLLMPGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI AQL G R E + TLH R+ W + R +K + GD + F +
Sbjct: 57 FNDTRVIPAQLTG------KRGEATVGVTLHKRLDLRRWQAFVRNAKRLAPGDTVDFGND 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ A V D+ + G F+ G E +E + GT+PLPPYIA KR D RD D
Sbjct: 111 -----VSADVEDRADDGS--FTFAFRGDEPVEVLLDRAGTMPLPPYIAGKRATDERDRDD 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A+ G+VAAPTA LHFTS L++ L G+ +TLHVGAGTF+PVK +DTDDH
Sbjct: 164 YQTMFAREDGAVAAPTAALHFTSELIAALDERGVARQTLTLHVGAGTFLPVKADDTDDHR 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE G I+ TA LN+ KSRGGRI++VGTTSLRLLE+AT EDG+I ++G T+IFITP
Sbjct: 224 MHSEWGRIEHDTADRLNAAKSRGGRIIAVGTTSLRLLESATGEDGVIRTFAGDTDIFITP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GYRFRAVD LM+NFHLPKSTL+MLVSA G E +Y HAI+ YRFYSYGD+SLL
Sbjct: 284 GYRFRAVDGLMTNFHLPKSTLMMLVSALMGRERMMDIYAHAIAQRYRFYSYGDSSLL 340
>gi|332187845|ref|ZP_08389579.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sphingomonas sp. S17]
gi|332012195|gb|EGI54266.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sphingomonas sp. S17]
Length = 345
Score = 356 bits (913), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 184/358 (51%), Positives = 237/358 (66%), Gaps = 19/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF LPP RIAL P PRDSAR++V+ + + D VSDLP L + D +V
Sbjct: 1 MNVDLFDFALPPERIALYPASPRDSARMLVLDGDAT-----RDERVSDLPQALRAGDLLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI AQL G R + +I TLH R W + R +K +++GD++ F
Sbjct: 56 FNDTRVIPAQLQG------TRGDAKIGATLHKREGVRRWRAFIRNAKRLREGDVIDF--- 106
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ + AT D+ G L F+ G E +E + GT+PLPPYIA+KR + +D D
Sbjct: 107 --GAGVSATANDRAEDGSFALDFA--GDEPVELLLERAGTMPLPPYIAQKRGVTEKDAED 162
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A+ G+VAAPTA LHFT LL L + GI+ +TLHVGAGTF+PVK +DT DH
Sbjct: 163 YQTMFAQEPGAVAAPTAALHFTPGLLESLAAAGIEHATLTLHVGAGTFLPVKADDTVDHK 222
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH+E G IDA TA LN+VK+RGGR+++VGTTSLRL+E+A EDG+I P+ G T IFITP
Sbjct: 223 MHAEWGRIDAATAHRLNAVKARGGRVIAVGTTSLRLIESAAGEDGVIRPFEGDTAIFITP 282
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GYRFR +D LM+NFHLP+STL MLVSA G++ + Y HAI+ YRFYSYGD SLL
Sbjct: 283 GYRFRGIDGLMTNFHLPRSTLFMLVSALMGLDRMQAAYAHAIAQGYRFYSYGDASLLL 340
>gi|294013326|ref|YP_003546786.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Sphingobium
japonicum UT26S]
gi|292676656|dbj|BAI98174.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Sphingobium
japonicum UT26S]
Length = 344
Score = 355 bits (910), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 187/358 (52%), Positives = 233/358 (65%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLPP IALRP PR SARL++ + P D +V DLP L D +V
Sbjct: 1 MRVDLFDFDLPPESIALRPASPRHSARLLLAAGD--APF--QDRIVRDLPGLLRPGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R + +I TLH R+ W + R +K ++ GD + F +
Sbjct: 57 FNDTKVIPAQLEGMRG------QAKIGATLHKRLGLRQWQAFLRNAKRVRDGDRIDFGNG 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ A + G ++L F G E +E + G +PLPPYIA KRP D RD D
Sbjct: 111 -----VTAVAGPRDEEGGVMLRFE--GEEPVELLLERAGRMPLPPYIASKRPTDERDRSD 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A+ G+VAAPTA LHFT L++ + GI +TLHVGAGTF+PVK EDTDDH
Sbjct: 164 YQTMFAREDGAVAAPTAALHFTPELMTAIEKAGIGTETLTLHVGAGTFLPVKAEDTDDHH 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH+E G ID TA LN+ ++ GGR+++VGTTSLRLLE+AT EDGII P+ T IFITP
Sbjct: 224 MHAEWGRIDQATAGRLNAARAAGGRLIAVGTTSLRLLESATGEDGIIRPFEDETRIFITP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GYRFRAVD LM+NFHLPKSTL MLVSA G E+ + +Y+HAI YRFYSYGD+SLL
Sbjct: 284 GYRFRAVDGLMTNFHLPKSTLFMLVSALMGTEKMQSVYRHAIDGGYRFYSYGDSSLLL 341
>gi|85708532|ref|ZP_01039598.1| S-adenosylmethionine:tRNA-ribosyltransferase [Erythrobacter sp.
NAP1]
gi|85690066|gb|EAQ30069.1| S-adenosylmethionine:tRNA-ribosyltransferase [Erythrobacter sp.
NAP1]
Length = 345
Score = 354 bits (908), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 188/358 (52%), Positives = 239/358 (66%), Gaps = 15/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP RIALRPV PRD+AR++VV + PL +DH VSDLP L D +V
Sbjct: 1 MRVDLFDFELPQERIALRPVRPRDAARMLVVEGS-QGPL--ADHGVSDLPCLLRPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI AQL G R + E +I TLH R+ W + R +K +K+GD L F
Sbjct: 58 FNDTRVIPAQLEGRR----SGGEAKIGATLHKRIDLRRWQAFIRNAKRVKEGDHLVFGGG 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ A + G + L+F G E +E + GT+PLPPYIA++R +D +D D
Sbjct: 114 -----VTAIAEKRHRDGSMTLLFE--GTEPVEVLLDRAGTMPLPPYIAQRRGVDDQDQSD 166
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A G+VAAPTA LHFT+ L+S L GIK +TLHVGAGTF+PVK EDT DH
Sbjct: 167 YQTMFAAEDGAVAAPTASLHFTTRLVSALDHAGIKREMLTLHVGAGTFLPVKAEDTKDHQ 226
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE G I+A TA +N ++ GGR+++VGTTSLRLLE+A EDG + ++G T+IFITP
Sbjct: 227 MHSEFGRINAGTASRINEARAAGGRVIAVGTTSLRLLESAAGEDGKLREFAGDTDIFITP 286
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY FR VD LM+NFHLPKSTL+MLVSA G E + Y+HAI+ YRFYSYGD+SLL
Sbjct: 287 GYPFRVVDGLMTNFHLPKSTLMMLVSALMGRERMMEAYEHAIAQNYRFYSYGDSSLLL 344
>gi|115524776|ref|YP_781687.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodopseudomonas palustris BisA53]
gi|122296024|sp|Q07MX7|QUEA_RHOP5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|115518723|gb|ABJ06707.1| Queuosine biosynthesis protein [Rhodopseudomonas palustris BisA53]
Length = 358
Score = 351 bits (900), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 187/362 (51%), Positives = 244/362 (67%), Gaps = 11/362 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M FDFDLP IALRP PRD+AR++VV + + + D +VS+LP +L DA+V
Sbjct: 1 MRTDLFDFDLPQGAIALRPASPRDAARMLVVEASGA----LHDRVVSELPEWLRPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI AQL G R E +I TL R+ + W +P+K + GDI+ F
Sbjct: 57 VNDTKVIAAQLTGRRIGRDT--EPKIDATLIKRLDGSRWQALVKPAKKLLPGDIVRF-GH 113
Query: 121 DGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
DG+ +L+ATV K GEI+L F++ G L++ I+ +G PLPPYIA KR D RD
Sbjct: 114 DGRVCLLGQLDATVEAKGEAGEIILAFTLHGPVLDQAIAELGAPPLPPYIASKRAPDDRD 173
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT +A +G+VAAPTAGLHFT L L + G+ ++ VTLHVGAGTF+PVK EDT
Sbjct: 174 AADYQTMFAANEGAVAAPTAGLHFTKALEQALAARGVTLHRVTLHVGAGTFLPVKTEDTA 233
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+H MH+E G + TA ALN+ ++ GRIV+VGTTSLRLLE+A +DG + P++ T IF
Sbjct: 234 EHKMHAEWGCLSRETADALNAARAADGRIVAVGTTSLRLLESAAGDDGRLAPFADDTAIF 293
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRF+AVD+LM+NFHLP+STL MLVSAF G++ ++ Y HAI YRFYSYGD LL
Sbjct: 294 ITPGYRFKAVDVLMTNFHLPRSTLFMLVSAFAGLDTMQRAYAHAIKSGYRFYSYGDACLL 353
Query: 357 FQ 358
F+
Sbjct: 354 FR 355
>gi|103487672|ref|YP_617233.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sphingopyxis alaskensis RB2256]
gi|122984871|sp|Q1GR22|QUEA_SPHAL RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|98977749|gb|ABF53900.1| Queuosine biosynthesis protein [Sphingopyxis alaskensis RB2256]
Length = 351
Score = 348 bits (894), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 184/361 (50%), Positives = 239/361 (66%), Gaps = 19/361 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRP PRD+AR++VV I D V DLP +L D +V
Sbjct: 1 MRVDAFDFDLPSERIALRPARPRDAARMLVVDAG-----NIVDAGVRDLPQWLRPGDCLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI AQL G+R E +I TLH R+ W + R +K ++ G+ + F S
Sbjct: 56 FNDTRVIPAQLEGLRG------EAKIGATLHKRIDLRRWQAFVRNAKRLRVGETVDFGSG 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ A ++ G +L F+ G E +E + GT+PLPPYIA KR D D D
Sbjct: 110 -----VAALAEERLADGSFVLAFA--GDEPVELLLERAGTMPLPPYIAGKRGADEADRDD 162
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A+ G+VAAPTA LHFT LL+ L + GI +TLHVGAGTF+PVK +DTDDH+
Sbjct: 163 YQTMFAREDGAVAAPTAALHFTPELLAALAAAGIATETLTLHVGAGTFLPVKADDTDDHV 222
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH+E G I+A TA LN+V++ GGR+++VGTTSLRLLE+A +DG I P++G T+IFITP
Sbjct: 223 MHAEWGRIEADTAARLNAVRASGGRVIAVGTTSLRLLESAARDDGTITPFAGDTSIFITP 282
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GYRF+A+D LM+NFHLP+STL MLVSA G+E + Y HAI+ YRFYSYGD SLL +
Sbjct: 283 GYRFKAIDGLMTNFHLPRSTLFMLVSALMGLETMQAAYAHAIAREYRFYSYGDASLLLPR 342
Query: 360 R 360
+
Sbjct: 343 Q 343
>gi|83591621|ref|YP_425373.1| queuosine biosynthesis protein [Rhodospirillum rubrum ATCC 11170]
gi|91207400|sp|Q2RXQ9|QUEA_RHORT RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|83574535|gb|ABC21086.1| Queuosine biosynthesis protein [Rhodospirillum rubrum ATCC 11170]
Length = 345
Score = 348 bits (893), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 188/356 (52%), Positives = 235/356 (66%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP IA+RP PRDSARL++V D V DLP L+ D +V
Sbjct: 1 MRVDLFDFDLPRDLIAVRPAVPRDSARLLLVEGESR-----RDLGVGDLPGLLDPGDILV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G I + + TLH RV P++W +ARP++ +K G ++ F
Sbjct: 56 FNDTRVIPARLKG----RIG--DGGVEVTLHKRVGPDAWDCFARPARKLKPGVVILF--- 106
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
ATV + GE L F +G L + G IPLPPYI KRP DARD DY
Sbjct: 107 --AEGFTATVAARGEDGEATLRFDRAGAALMAALEAYGHIPLPPYI--KRPDDARDRADY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHFT LL+ L + G+ VTLHVGAGTF+PVKVEDTDDH M
Sbjct: 163 QTIYAREDGAVAAPTAGLHFTPALLAALEARGVSRAMVTLHVGAGTFLPVKVEDTDDHRM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G + A TA+A+N+ ++ GG++V+VGTT++RLLE+AT D +I P+ G T+IFITPG
Sbjct: 223 HAETGTLTAQTAEAINAARAAGGKVVAVGTTAMRLLESATGADKVIRPFHGDTSIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF AVD LM+NFHLP+STL MLVSAF G + Y HAIS YRFYSYGD+SLL
Sbjct: 283 YRFNAVDRLMTNFHLPRSTLFMLVSAFAGASRMRNAYAHAISQGYRFYSYGDSSLL 338
>gi|144900483|emb|CAM77347.1| Queuosine biosynthesis protein [Magnetospirillum gryphiswaldense
MSR-1]
Length = 345
Score = 348 bits (892), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 180/356 (50%), Positives = 234/356 (65%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP + IA RPV PRD+ARL+ V ++D +V DLP +L D ++
Sbjct: 1 MDVNLFDFDLPRTLIAERPVSPRDAARLLHVQAG-----GLTDGVVGDLPRWLRPGDLLI 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G + E I TLH R S + W +ARP+K ++ GD + F
Sbjct: 56 SNDTRVIPARLFG------RKGEGGIELTLHERTSLDEWKAFARPAKKLRPGDEVRFADD 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
ATV K GE+L+ F G +L + G +PLPPYI RK D RD DY
Sbjct: 110 -----FSATVAAKGEAGEVLMRFDRGGDDLMLALDAYGRLPLPPYI-RKGEADERDRADY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +G+VAAPTAGLHFT LL+ L S G+ +TLHVGAGTF+PVKV+DT DH M
Sbjct: 164 QTVFAREKGAVAAPTAGLHFTDALLTALESAGVTRTTITLHVGAGTFLPVKVDDTKDHRM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G + A A +N K+ GGR+V+VGTTSLRLLE+A +DG+++P+ G T+IFITPG
Sbjct: 224 HAERGVVTAEVADLVNRTKAAGGRVVAVGTTSLRLLESAADDDGVLHPFDGPTDIFITPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRFR VD+LM+NFHLPKSTL MLVSAF G++ + Y +A++ YRFYSYGD LL
Sbjct: 284 YRFRLVDVLMTNFHLPKSTLFMLVSAFAGLDRMHQAYAYAMNRGYRFYSYGDACLL 339
>gi|56551748|ref|YP_162587.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Zymomonas
mobilis subsp. mobilis ZM4]
gi|81598273|sp|Q5NP84|QUEA_ZYMMO RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|56543322|gb|AAV89476.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Zymomonas
mobilis subsp. mobilis ZM4]
Length = 342
Score = 346 bits (888), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 180/359 (50%), Positives = 232/359 (64%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP IALRP PR+SARL+ V + D+ V+DLP L D ++
Sbjct: 1 MRVDLFDFELPTESIALRPAVPRESARLLQV-----TSQEMDDYHVADLPNLLQEGDLLI 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A L G + + IS + R W + R +K +K DI+ F
Sbjct: 56 FNDTRVIPAYLEG------KKNQARISANMIKREGLRQWQAFVRNAKRLKSDDIVDF--- 106
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
GQ + A V+ + + G +L F + +E + G +PLPPYIA KRP D +D DY
Sbjct: 107 -GQD-VSARVVHRNDDGSVLFEF-LGNEPVEILLERAGNMPLPPYIAHKRPADQQDRQDY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +G+VAAPTA LHFT LL RL G+K VTLHVGAGTF+P+KVED+DDH+M
Sbjct: 164 QTIFAEKEGAVAAPTASLHFTEELLQRLEEKGVKHTKVTLHVGAGTFLPMKVEDSDDHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE G I A TA A+N K +GGR+++ GTTSLRL+E+A E G+++P+S T+IFITPG
Sbjct: 224 HSEWGQISAETANAINETKKQGGRVIATGTTSLRLIESAADETGLVHPFSDETDIFITPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRFR +D LM+NFHLPKSTL MLVSA G E+ YQHAI YRFYSYGD+SLL K
Sbjct: 284 YRFRVIDGLMTNFHLPKSTLFMLVSALMGREKMLAAYQHAIDTGYRFYSYGDSSLLLPK 342
>gi|5834352|gb|AAD53918.1|AF179611_2 S-adenosylmethionine tRNA ribosyltransferase [Zymomonas mobilis
subsp. mobilis ZM4]
Length = 342
Score = 345 bits (884), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 179/359 (49%), Positives = 232/359 (64%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP IALRP PR+SARL+ V + D+ V+DLP L D ++
Sbjct: 1 MRVDLFDFELPTESIALRPAVPRESARLLQV-----TSQEMDDYHVADLPNLLQEGDLLI 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A L G + + IS + R W + R +K +K DI+ F
Sbjct: 56 FNDTRVIPAYLEG------KKNQARISANMIKREGLRQWQAFVRNAKRLKSDDIVDF--- 106
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
GQ + A V+ + + G +L F + +E + G +PLPPYIA KRP D +D DY
Sbjct: 107 -GQD-VSARVVHRNDDGSVLFEF-LGNEPVEILLERAGNMPLPPYIAHKRPADQQDRQDY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +G+VAAPTA LHFT LL RL G+K VTLHVGAGTF+P+KVED+DDH+M
Sbjct: 164 QTIFAEKEGAVAAPTASLHFTEELLQRLEEKGVKHTKVTLHVGAGTFLPMKVEDSDDHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE G I A TA A+N K +GGR+++ GTTSLRL+++A E G+++P+S T+IFITPG
Sbjct: 224 HSEWGQISAETANAINETKKQGGRVIATGTTSLRLIDSAADETGLVHPFSDETDIFITPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRFR +D LM+NFHLPKSTL MLVSA G E+ YQHAI YRFYSYGD+SLL K
Sbjct: 284 YRFRVIDGLMTNFHLPKSTLFMLVSALMGREKMLAAYQHAIDTGYRFYSYGDSSLLLPK 342
>gi|94497297|ref|ZP_01303868.1| Queuosine biosynthesis protein [Sphingomonas sp. SKA58]
gi|94423160|gb|EAT08190.1| Queuosine biosynthesis protein [Sphingomonas sp. SKA58]
Length = 344
Score = 345 bits (884), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 185/361 (51%), Positives = 235/361 (65%), Gaps = 18/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLPP IALRP PRDSARL+ + P I D V DLP+ L + D +V
Sbjct: 1 MRVDLFDFDLPPDNIALRPASPRDSARLLAA----AGPSGIEDRTVRDLPSLLRAGDMLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI AQL G R E I TLH R+ W + R +K +++GD + F +
Sbjct: 57 FNDTRVIPAQLEG------RRGEARIGATLHKRIGLRQWQAFLRNAKRVREGDRIEFGAG 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ A + G + L F G E +E + GT+PLPPYIA KRP D +D D
Sbjct: 111 -----VTAIAGARDEDGGVTLEFE--GDEPVEILLERAGTMPLPPYIASKRPTDEQDRSD 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A+ G+VAAPTA LHFT L+ + + G+ +TLHVGAGTF+PVK +DTDDH
Sbjct: 164 YQTMFAREDGAVAAPTAALHFTPELMDAIAAAGVLTQTLTLHVGAGTFLPVKAQDTDDHR 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH+E G IDA A LN+ ++ GGR+++VGTTSLRLLE+A EDG+I P++ T IFITP
Sbjct: 224 MHAEWGRIDAAAADRLNAARAAGGRLIAVGTTSLRLLESAAGEDGVIRPFADETRIFITP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GYRFRAVD LM+NFHLPKSTL MLVSA G E + +Y HAI+ YRFYSYGD+SLL +
Sbjct: 284 GYRFRAVDGLMTNFHLPKSTLFMLVSALMGRERMQAIYAHAIAQGYRFYSYGDSSLLLPE 343
Query: 360 R 360
+
Sbjct: 344 K 344
>gi|83858653|ref|ZP_00952175.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Oceanicaulis alexandrii HTCC2633]
gi|83853476|gb|EAP91328.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Oceanicaulis alexandrii HTCC2633]
Length = 357
Score = 345 bits (884), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 184/363 (50%), Positives = 226/363 (62%), Gaps = 14/363 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP RIALRP PRDSARL+ V +SD V DLP L D +V
Sbjct: 4 MRLSDFDFHLPEDRIALRPARPRDSARLLQVKDG-----GLSDLGVLDLPNLLEPGDLLV 58
Query: 61 FNNTKVITAQLNGVR--FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
FN+T+VI A L GVR H EI LH R W + RP+K +K+GD LHF
Sbjct: 59 FNDTRVIPAALTGVRPARAHGGGGGVEIEINLHKRDDEAVWRAFVRPAKRLKEGDTLHF- 117
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ L A V +K GE++L F +G+EL++ I G PLPPYIA KR DA D
Sbjct: 118 ----KGGLTAEVREKREGGEVVLTFDRAGVELDKAIVEAGAPPLPPYIASKRAADAADLE 173
Query: 179 DYQTTYA--KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT YA GSVAAPTAGLHFT L + L + GIK VTLHVGAGTF+PVK ED
Sbjct: 174 DYQTVYAAPDKAGSVAAPTAGLHFTDRLFAALDARGIKRTHVTLHVGAGTFLPVKTEDLS 233
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+H MH+E + A+ +N + GGRI++VGTTS+R LE+A EDG + + T IF
Sbjct: 234 EHQMHAEWYSVSEEAARTINETRKAGGRIIAVGTTSIRTLESAAEEDGTVRAEARDTAIF 293
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPG RF+ +D LM+NFHLPKSTL MLVSA G E+ Y HAI YRF+SYGD+SLL
Sbjct: 294 ITPGCRFKVIDALMTNFHLPKSTLFMLVSALAGFEDMHAAYAHAIREHYRFFSYGDSSLL 353
Query: 357 FQK 359
++K
Sbjct: 354 WRK 356
>gi|149184807|ref|ZP_01863125.1| Queuosine biosynthesis protein [Erythrobacter sp. SD-21]
gi|148832127|gb|EDL50560.1| Queuosine biosynthesis protein [Erythrobacter sp. SD-21]
Length = 342
Score = 344 bits (883), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 184/358 (51%), Positives = 233/358 (65%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP RIALRP PRD+AR++VV + P +D V DLPA L+ D +V
Sbjct: 1 MKVDLFDFELPNERIALRPARPRDAARMLVVRG--AEPF--ADRTVLDLPAMLDPGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI AQL G R E +I TLH RV W + R +K ++ G+I F
Sbjct: 57 FNDTRVIPAQLEG------RRGEAKIGATLHKRVDLRRWQAFIRNAKRLRVGEIATF--- 107
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ A ++ G +L F G E +E + GT+PLPPYIA KR DA+D D
Sbjct: 108 --GGGVTALAEERLADGSFILFFE--GEEPVEVLLERAGTMPLPPYIAGKRATDAQDRED 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +AK G+VAAPTA LHFT L+ L GI +TLHVGAGTF+PVK +DT+DH
Sbjct: 164 YQTMFAKEDGAVAAPTAALHFTDRLMGALAERGIGTETLTLHVGAGTFLPVKADDTEDHQ 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH+E G I+ TA LN+V++ G R+++VGTTSLRLLE+AT ED +I P++G T+IFITP
Sbjct: 224 MHAEWGRIEQDTADRLNAVRAGGNRVIAVGTTSLRLLESATGEDKVIRPFAGDTDIFITP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY FRA+D LM+NFHLPKSTL MLV A G E + Y HAI+ YRFYSYGD+SLL
Sbjct: 284 GYSFRAIDGLMTNFHLPKSTLFMLVGALMGRERMQAAYAHAIATEYRFYSYGDSSLLL 341
>gi|241762411|ref|ZP_04760490.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Zymomonas
mobilis subsp. mobilis ATCC 10988]
gi|241373098|gb|EER62747.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Zymomonas
mobilis subsp. mobilis ATCC 10988]
Length = 342
Score = 343 bits (881), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 179/359 (49%), Positives = 232/359 (64%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP IALRP PR+SARL+ V + D+ V+DLP L D ++
Sbjct: 1 MRVDLFDFELPTESIALRPAVPRESARLLQV-----TSQGMDDYHVADLPNLLQEGDLLI 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A L G + + IS + R W + R +K +K DI+ F
Sbjct: 56 FNDTRVIPAYLEG------KKNQARISANMIKREGLRQWQAFVRNAKRLKSDDIVDF--- 106
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
GQ + A V+ + + G +L F + +E + G +PLPPYIA KRP D +D DY
Sbjct: 107 -GQD-VSARVVHRNDDGSVLFEF-LGNEPVEILLERAGNMPLPPYIAHKRPADQQDRQDY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +G+VAAPTA LHFT LL RL G+K VTLHVGAGTF+P+KVED+DDH+M
Sbjct: 164 QTIFAEKEGAVAAPTASLHFTEELLQRLEEKGVKHTKVTLHVGAGTFLPMKVEDSDDHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE G I A TA A+N K +GGR+++ GTTSLRL+E+A E G+++P+S T+IFITPG
Sbjct: 224 HSEWGQISAETANAINETKKQGGRVIATGTTSLRLIESAADEMGLVHPFSDETDIFITPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRF+ +D LM+NFHLPKSTL MLVSA G E+ YQHAI YRFYSYGD+SLL K
Sbjct: 284 YRFQVIDGLMTNFHLPKSTLFMLVSALMGREKMLAAYQHAIDTGYRFYSYGDSSLLLPK 342
>gi|260752680|ref|YP_003225573.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
gi|258552043|gb|ACV74989.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
Length = 342
Score = 342 bits (878), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 178/359 (49%), Positives = 231/359 (64%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP IALRP PR+SARL+ V + D+ V+DLP L D ++
Sbjct: 1 MRVDLFDFELPTESIALRPAVPRESARLLQV-----TSQGMDDYHVADLPNLLQEGDLLI 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A L G + + IS + R W + R +K +K DI+ F
Sbjct: 56 FNDTRVIPAYLEG------KKNQARISANMIKREGLRQWQAFVRNAKRLKSDDIVDF--- 106
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
GQ + A V+ + + G +L F + +E + G +PLPPYIA KRP D +D DY
Sbjct: 107 -GQD-VSARVVHRNDDGSVLFEF-LGNEPVEILLERAGNMPLPPYIAHKRPADQQDRQDY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +G+VAAPTA LHFT LL RL G+K VTLHVGAGTF+P+KV+D+DDH+M
Sbjct: 164 QTIFAEKEGAVAAPTASLHFTEELLQRLEEKGVKHTKVTLHVGAGTFLPMKVDDSDDHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE G I A TA +N K +GGR+++ GTTSLRL+E+A E G+++P+S T+IFITPG
Sbjct: 224 HSEWGQISAETANVINETKKQGGRVIATGTTSLRLIESAADETGLVHPFSDETDIFITPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRFR +D LM+NFHLPKSTL MLVSA G E+ YQHAI YRFYSYGD+SLL K
Sbjct: 284 YRFRVIDGLMTNFHLPKSTLFMLVSALMGREKMLAAYQHAIDTGYRFYSYGDSSLLLPK 342
>gi|288958938|ref|YP_003449279.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Azospirillum sp. B510]
gi|288911246|dbj|BAI72735.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Azospirillum sp. B510]
Length = 342
Score = 342 bits (877), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 182/358 (50%), Positives = 233/358 (65%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLPP RIA PV PRD+ARL+ V +L D +V DLPA L D +V
Sbjct: 1 MKTADFDFDLPPDRIAEHPVRPRDAARLLEVGSSLR------DLIVRDLPALLQPGDLMV 54
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L+G R E + TLH R+ W+ +++P K +K GD + ++
Sbjct: 55 VNDTRVIPARLDG------RRGEVAVEITLHKRLGERDWATFSKPGKRLKPGDTI-VIAE 107
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D + + A + E+ L FS G +L + G +PLPPYI RK DA D DY
Sbjct: 108 DFSAEVTAK-----DGMEVRLRFSAGGADLMEALHRHGRMPLPPYIRRK--ADAGDNADY 160
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A +G+VAAPTAGLHFT++LL+ L + G++ VTLHVGAGTF+PVKV+D DH M
Sbjct: 161 QTVFAAREGAVAAPTAGLHFTADLLAALDARGVRRVPVTLHVGAGTFLPVKVDDIADHKM 220
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE G I TA A+N + GGRIVSVGTT+LR+LETA DG + P+SG T+IFITPG
Sbjct: 221 HSEWGEISPETAAAVNETRKAGGRIVSVGTTALRILETAGRPDGTLVPFSGDTDIFITPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRFR VD+L +NFHLPKSTL MLV AF G + + Y HAI H YRF+SYGD SLL +
Sbjct: 281 YRFRIVDLLWTNFHLPKSTLFMLVCAFAGYDRMRAAYAHAIDHDYRFFSYGDASLLHR 338
>gi|87200264|ref|YP_497521.1| queuosine biosynthesis protein [Novosphingobium aromaticivorans DSM
12444]
gi|123488975|sp|Q2G636|QUEA_NOVAD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|87135945|gb|ABD26687.1| Queuosine biosynthesis protein [Novosphingobium aromaticivorans DSM
12444]
Length = 342
Score = 341 bits (875), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 181/358 (50%), Positives = 230/358 (64%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP IALRP PRDSARL+ V P D +V DLP LN D +V
Sbjct: 1 MRVDLFDFELPSENIALRPARPRDSARLLGV--GRDGPF--RDLIVRDLPDLLNPGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI AQL G R E + TLH R+ W + R +K +++GD++ F +
Sbjct: 57 FNDTRVIPAQLEG------QRGEARVGATLHKRIDLRRWQAFVRNAKRLREGDVIQFGAG 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ AT + G L F G E +E + G +PLPPYIA KRP D +D D
Sbjct: 111 -----VTATAEMRLPDGSWTLFFP--GEEPVEVLLERAGRMPLPPYIAGKRPTDEQDRED 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A G+VAAPTA LHFT +L+ L + G+ +TLHVGAGTF+PVK +DT DH
Sbjct: 164 YQTMFAAKDGAVAAPTAALHFTPSLMEALAARGVATETLTLHVGAGTFLPVKADDTQDHQ 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH+E G IDA TA LN+ ++ G R+++VGTTSLRLLE+AT ED +I P+ G T+IFITP
Sbjct: 224 MHAEWGTIDAATADRLNAARAAGKRVIAVGTTSLRLLESATGEDRVIRPFEGDTSIFITP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY FRA+D LM+NFHLPKSTL MLVSA G++ + Y HAI+ YRFYSYGD+SLL
Sbjct: 284 GYTFRAIDGLMTNFHLPKSTLFMLVSALMGLDRMQAAYAHAIAGGYRFYSYGDSSLLL 341
>gi|326387409|ref|ZP_08209018.1| queuosine biosynthesis protein [Novosphingobium nitrogenifigens DSM
19370]
gi|326208065|gb|EGD58873.1| queuosine biosynthesis protein [Novosphingobium nitrogenifigens DSM
19370]
Length = 342
Score = 340 bits (873), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 185/358 (51%), Positives = 224/358 (62%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLPP RIALRP PRDSARL+ V P + D V DLP L D +V
Sbjct: 1 MRVDLFDFDLPPERIALRPARPRDSARLLHV-PGKGA---LGDLHVRDLPGLLRKGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI AQL G+R + I TLH R W + R K + GD + F
Sbjct: 57 FNDTRVIPAQLEGMRG------QARIGATLHKREDLRRWQAFVRNGKRLSPGDTIDF--- 107
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVD 179
G+ + + + G L F G E +E + G +PLPPYIA KRP DA D D
Sbjct: 108 -GEGVMALAEV-RHPDGSWTLAFQ--GDEPVEILLERAGRMPLPPYIASKRPTDAADRQD 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A G+VAAPTA LHFT LL L GI +TLHVGAGTF+PVK EDT DH
Sbjct: 164 YQTMFAARDGAVAAPTAALHFTPGLLEALADAGIGHETLTLHVGAGTFLPVKAEDTSDHA 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH E G I+ TA LN+V++ GGR+++VGTTSLRLLE+A ED +I P++G T+IFITP
Sbjct: 224 MHPEWGRIEQETADRLNAVRAGGGRVIAVGTTSLRLLESAAGEDRVIRPFAGDTSIFITP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY FRA+D LM+NFHLPKSTL MLVSA G++ ++ Y HAI YRFYSYGD SLL
Sbjct: 284 GYTFRAIDGLMTNFHLPKSTLFMLVSALMGLDRMQEAYAHAIREGYRFYSYGDASLLL 341
>gi|154253493|ref|YP_001414317.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Parvibaculum lavamentivorans DS-1]
gi|171769669|sp|A7HXM7|QUEA_PARL1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|154157443|gb|ABS64660.1| Queuosine biosynthesis protein [Parvibaculum lavamentivorans DS-1]
Length = 350
Score = 335 bits (858), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 183/357 (51%), Positives = 233/357 (65%), Gaps = 10/357 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDFDLP IALRP PRDSAR++V+ P + ++D VSDLP+ L D +V
Sbjct: 1 MRVSDFDFDLPEELIALRPARPRDSARMLVIGPAENA---LADKSVSDLPSHLREGDILV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI A+L G R I LH R S + W + RP+K + + + F
Sbjct: 58 FNDTKVIPARLFGTR--RRGEASARIEVMLHKRESADEWRAFLRPAKKLNLSETIDF--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A V +K GE L FS+SG L+ I+ G +PLPPYIARKR D D DY
Sbjct: 113 --PGGLSAAVEEKGEGGEAGLRFSLSGPALDAAIAAAGEMPLPPYIARKRAADDEDVADY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A G+VAAPTAGLHFT L++ + + G+ +TLHVGAGTF+PV EDTD H M
Sbjct: 171 QTLHADEPGAVAAPTAGLHFTPALMAAIEARGVSTVRLTLHVGAGTFLPVTAEDTDTHKM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G I A A+N +++GGRIV+VGTTSLRLLE+A E G ++P+ G T+IFITPG
Sbjct: 231 HAERGEITEAEAAAINEARAKGGRIVAVGTTSLRLLESAVDEAGTVHPFRGETDIFITPG 290
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YRFRAVD+LM+NFHLP+STL MLVSA EE K+ Y HA++ YRFYSYGD L++
Sbjct: 291 YRFRAVDVLMTNFHLPRSTLFMLVSALRSTEEMKRAYAHAVAEKYRFYSYGDACLIY 347
>gi|315499637|ref|YP_004088440.1| s-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Asticcacaulis excentricus CB 48]
gi|315417649|gb|ADU14289.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Asticcacaulis excentricus CB 48]
Length = 348
Score = 334 bits (856), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 177/362 (48%), Positives = 227/362 (62%), Gaps = 19/362 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDFDLP RIALRPV PR++ARL+ V +V D V DLP+ L + D +V
Sbjct: 1 MKVSDFDFDLPEDRIALRPVTPREAARLLRVDG-----VVREDWRVGDLPSLLKAGDLLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKE---ISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
NNT+V+ QL G R RE + TL + W + +P + I++GD L F
Sbjct: 56 INNTRVLPTQLKGTRV-----REGQTVAFEATLIKSLDGQRWQAFLKPGRRIREGDTLRF 110
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L A V+ K G +L F + E+ + +G +PLPPYI KRP D +D
Sbjct: 111 ------DDLSARVLSKDEDGVYVLRFEQAASEVLNGLHRLGGMPLPPYIRSKRPEDEQDK 164
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT +A+ +GSVAAPTAGLHFT LL L G+ VTLHVGAGTF+PVKVEDT D
Sbjct: 165 SDYQTVFARDEGSVAAPTAGLHFTPELLQALRDKGVLFEEVTLHVGAGTFLPVKVEDTKD 224
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+E G + A +A +N+ + GGRI+++GTT+LRL+E+A DG I+P+SG T+IFI
Sbjct: 225 HRMHAEFGVVSADSAARINAARVAGGRIIAIGTTALRLIESACDADGRIHPFSGDTDIFI 284
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPG R+ D+L +NFHLPKSTL MLV AF G E K Y HAI+ YRF+SYGD SLL
Sbjct: 285 TPGVPVRSADMLWTNFHLPKSTLFMLVCAFAGTEAMKAAYAHAINSGYRFFSYGDASLLT 344
Query: 358 QK 359
K
Sbjct: 345 NK 346
>gi|23016644|ref|ZP_00056398.1| COG0809: S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
(queuine synthetase) [Magnetospirillum magnetotacticum
MS-1]
Length = 345
Score = 331 bits (849), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 183/358 (51%), Positives = 234/358 (65%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLV--ISDHLVSDLPAFLNSNDA 58
M V +FDF+LP IA RPV PRDSARL+ V P++ +SD V DLP L D
Sbjct: 1 MRVDDFDFELPRELIAERPVCPRDSARLLHV------PIIGGLSDRGVRDLPDLLMPGDI 54
Query: 59 IVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
+VFN+TKVI A+L G R + TLH R W +ARP+K ++ GD + F
Sbjct: 55 LVFNDTKVIPARLFG------RRGTAGVEVTLHQRTGLAQWKAFARPAKKLRPGDRVDF- 107
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
ATV +K GE+ L F SG +L + G++PLPPYI RK D RD
Sbjct: 108 ----AEGFFATVAEKGEMGEVTLDFDRSGEDLMVALEAFGSLPLPPYI-RKGEADERDRG 162
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ +G+VAAPTAGLHFT +LL+ L + G+K VTLHVGAGTF+PVK +DT+DH
Sbjct: 163 DYQTVFARQKGAVAAPTAGLHFTPDLLAALDARGVKRATVTLHVGAGTFLPVKADDTNDH 222
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH EIG I TA A+N+ K+ GGR+V+VGTTS RLLE+A GI++P+ G T+IFIT
Sbjct: 223 RMHQEIGVITPETAAAINAAKAAGGRVVAVGTTSARLLESAADPLGILHPFDGATDIFIT 282
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PG+ FR D+L++NFHLP+STL MLVSAF G+ K+ Y+HA + YRFYSYGD LL
Sbjct: 283 PGHSFRLADVLLTNFHLPRSTLFMLVSAFSGLSRMKEAYEHAKAAGYRFYSYGDCCLL 340
>gi|91207425|sp|Q5FR06|QUEA_GLUOX RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
Length = 347
Score = 326 bits (835), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 173/351 (49%), Positives = 224/351 (63%), Gaps = 15/351 (4%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
FDF+LP IA P PRDSA L+ V P L H++ DLP FL D ++ NNT
Sbjct: 8 FDFELPRDHIATEPARPRDSATLLHVRPGLPP----DPHVIRDLPDFLREGDLLIANNTA 63
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSR 125
VI AQL R E +I TL ++ SW AR S+ +K DILHF G
Sbjct: 64 VIRAQLAATR------GEAKIGLTLDRILANGSWHALARNSRKLKPQDILHF----GDDP 113
Query: 126 LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYA 185
+ ATVI+ G + + FS+ G E + + VG + LPPYI R +D DY+T ++
Sbjct: 114 VTATVIENEGDGAVSIRFSVEGDEFDAFLERVGALALPPYIERPFGPTKQDDADYRTIFS 173
Query: 186 KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIG 245
+ +G+VAAPTAGLHFT +L+ L + GI+ +TLHVGAGTF+PV+ +H MH+E G
Sbjct: 174 QYRGAVAAPTAGLHFTPEVLAALDAKGIQRRTLTLHVGAGTFLPVR-STIAEHKMHAEWG 232
Query: 246 FIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRA 305
IDA TA A+N ++RGGRIV+VGTTSLRLLE+A EDG + PW G T+IFI PGYRF+A
Sbjct: 233 EIDAETAAAINETRARGGRIVAVGTTSLRLLESAAREDGTVAPWRGETSIFIKPGYRFKA 292
Query: 306 VDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
VD+LM+NFHLP+STL MLV AF G E ++ Y +AI++ RFYSYGD LL
Sbjct: 293 VDVLMTNFHLPRSTLFMLVCAFSGTETMREAYAYAIANGLRFYSYGDACLL 343
>gi|58039882|ref|YP_191846.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Gluconobacter oxydans 621H]
gi|58002296|gb|AAW61190.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Gluconobacter oxydans 621H]
Length = 357
Score = 325 bits (834), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 173/351 (49%), Positives = 224/351 (63%), Gaps = 15/351 (4%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
FDF+LP IA P PRDSA L+ V P L H++ DLP FL D ++ NNT
Sbjct: 18 FDFELPRDHIATEPARPRDSATLLHVRPGLPP----DPHVIRDLPDFLREGDLLIANNTA 73
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSR 125
VI AQL R E +I TL ++ SW AR S+ +K DILHF G
Sbjct: 74 VIRAQLAATR------GEAKIGLTLDRILANGSWHALARNSRKLKPQDILHF----GDDP 123
Query: 126 LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYA 185
+ ATVI+ G + + FS+ G E + + VG + LPPYI R +D DY+T ++
Sbjct: 124 VTATVIENEGDGAVSIRFSVEGDEFDAFLERVGALALPPYIERPFGPTKQDDADYRTIFS 183
Query: 186 KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIG 245
+ +G+VAAPTAGLHFT +L+ L + GI+ +TLHVGAGTF+PV+ +H MH+E G
Sbjct: 184 QYRGAVAAPTAGLHFTPEVLAALDAKGIQRRTLTLHVGAGTFLPVR-STIAEHKMHAEWG 242
Query: 246 FIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRA 305
IDA TA A+N ++RGGRIV+VGTTSLRLLE+A EDG + PW G T+IFI PGYRF+A
Sbjct: 243 EIDAETAAAINETRARGGRIVAVGTTSLRLLESAAREDGTVAPWRGETSIFIKPGYRFKA 302
Query: 306 VDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
VD+LM+NFHLP+STL MLV AF G E ++ Y +AI++ RFYSYGD LL
Sbjct: 303 VDVLMTNFHLPRSTLFMLVCAFSGTETMREAYAYAIANGLRFYSYGDACLL 353
>gi|83952643|ref|ZP_00961373.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseovarius
nubinhibens ISM]
gi|83835778|gb|EAP75077.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseovarius
nubinhibens ISM]
Length = 348
Score = 323 bits (828), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 168/356 (47%), Positives = 229/356 (64%), Gaps = 11/356 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RPV PR +ARL+V I D V DL +L D +V
Sbjct: 1 MKLSDFDFDLPEELIATRPVRPRPAARLLVAEGA-----AIRDAHVRDLGQWLRPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L+G+R + I TL W +P K +++G+++ F
Sbjct: 56 LNDTKVIPARLSGLRHREGSEAGARIEVTLLEPDGQGQWGALIKPLKKLREGEVVAF--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ L AT++ K + G+ LL F++ G + + ++ G +PLPPYIA KRP DA+D+ DY
Sbjct: 113 --AAGLSATLVAK-SEGQGLLRFNLEGDDFDAALAEAGAMPLPPYIAAKRPADAQDHEDY 169
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +G+VAAPTA LHF LL+ L G+++ VTLHVGAGTF+PVKVED H M
Sbjct: 170 QTVFARNKGAVAAPTASLHFDEALLAALRGQGVEMTHVTLHVGAGTFLPVKVEDVTTHKM 229
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G + A + + ++ GGRI+ VGTT+LRL+ETA+ E G I PW G T+IFI PG
Sbjct: 230 HAEWGEVSEKAAAEIAATRAAGGRIIPVGTTALRLIETASRETGEIAPWQGETDIFIYPG 289
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ FRA D LM+NFHLPKSTL+MLVSA G + ++Y+HAI+ YRF+SYGD SLL
Sbjct: 290 FTFRATDALMTNFHLPKSTLMMLVSALMGKDRMARVYEHAIAEKYRFFSYGDASLL 345
>gi|126726330|ref|ZP_01742171.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodobacterales bacterium HTCC2150]
gi|126704193|gb|EBA03285.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodobacterales bacterium HTCC2150]
Length = 359
Score = 323 bits (828), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 165/358 (46%), Positives = 228/358 (63%), Gaps = 13/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +++FDLP + IA RP PR +AR++ V + S L V+DL LN+ D +V
Sbjct: 1 MKLSDYNFDLPETLIATRPAVPRTAARMLHVAGDDSVDLS-----VTDLTDLLNAGDLLV 55
Query: 61 FNNTKVITAQLNGVRFCH--INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
NNTKVI A+L G RF +I TL + W +P K +K+G+ + F
Sbjct: 56 LNNTKVIPARLFGQRFRQGDAGATSAKIEMTLLSPTTDGHWQALVKPLKKVKEGEEVVF- 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+L A +I K + G ++ F+ G + + ++ VG +PLPPYIA KR D +D++
Sbjct: 115 ----SEKLSAKLISKAD-GMSVVAFNQQGRDFDEALAEVGKMPLPPYIAAKRAADQQDHI 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LL ++ + G+ + +VTLHVGAGTF+PVKV+D H
Sbjct: 170 DYQTVFAQTTGAVAAPTASLHFDQELLDKIRAKGVNITYVTLHVGAGTFLPVKVDDISQH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE G + A+A+ +GGR++ VGTT+LRL+ETA E+G I+PW G T+IFI
Sbjct: 230 KMHSEWGEVTDGAAKAIMQTHEQGGRVIPVGTTALRLIETAADENGKISPWVGDTDIFIH 289
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY F+ D LM+NFHLPKSTL+MLVSA G K++Y HAI H YRF+SYGD+SLL
Sbjct: 290 PGYEFKVTDALMTNFHLPKSTLMMLVSALMGQSRIKEVYSHAIEHKYRFFSYGDSSLL 347
>gi|148260342|ref|YP_001234469.1| queuosine biosynthesis protein [Acidiphilium cryptum JF-5]
gi|326403533|ref|YP_004283615.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Acidiphilium multivorum AIU301]
gi|166216693|sp|A5FY68|QUEA_ACICJ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|146402023|gb|ABQ30550.1| Queuosine biosynthesis protein [Acidiphilium cryptum JF-5]
gi|325050395|dbj|BAJ80733.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Acidiphilium multivorum AIU301]
Length = 345
Score = 319 bits (818), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 164/356 (46%), Positives = 219/356 (61%), Gaps = 14/356 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+ LPP RIA P PR +ARL+ V + + D + DLPA L D +V
Sbjct: 1 MNLADFDYHLPPERIAAEPARPRHAARLLHVRGD-----GLDDRTILDLPALLAPGDLLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI AQL G R + I TL ++ +W V R ++ + G+ +
Sbjct: 56 VNDTRVIPAQLTG------RRGDARIGITLDRPLADGTWRVLLRNARRARPGETIAI--- 106
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DG + A VID+ G L F + ++ LPPYI R I +D DY
Sbjct: 107 DGAGGIAAEVIDRAPDGSATLRFDCDAETFRAMLDRAASLALPPYIPRPAGISEQDRQDY 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A +G+VAAPTAGLHFT +L+ L + G+ + VTLHVGAGTF+PV+ + + H +
Sbjct: 167 QTMFAAEEGAVAAPTAGLHFTETVLAALAARGVGLATVTLHVGAGTFLPVREDQLERHKL 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G I TA +N+ ++RGGRIV+VGTTSLR+LETA +DG + PW G T +FITPG
Sbjct: 227 HAERGLIGPETAALVNATRARGGRIVAVGTTSLRVLETAAGDDGTLAPWHGETELFITPG 286
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF+ VD LM+NFHLPKSTLLMLV+AF G+E + Y HAI+ YRFYSYGD SLL
Sbjct: 287 YRFKLVDRLMTNFHLPKSTLLMLVAAFAGVERMRAAYAHAIARGYRFYSYGDASLL 342
>gi|163792636|ref|ZP_02186613.1| Queuosine biosynthesis protein [alpha proteobacterium BAL199]
gi|159182341|gb|EDP66850.1| Queuosine biosynthesis protein [alpha proteobacterium BAL199]
Length = 349
Score = 319 bits (818), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 171/363 (47%), Positives = 229/363 (63%), Gaps = 20/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FD+ LP RIA P PRD+ARL+ + + ++D ++DLP L D ++
Sbjct: 1 MRVDLFDYHLPEERIARFPANPRDTARLLDLTGDR-----LADRTIADLPDLLQPGDLLI 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L+G R E ++ TLH R W +ARP+K ++ GD + F +Q
Sbjct: 56 ANDTRVIPARLDG------KRGEAKVEVTLHKRDGDAVWRAFARPAKKLRPGDRITF-AQ 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D L A V K GE+ L F +G L ++ G +PLPPYI R+ D DY
Sbjct: 109 D----LTAEVTAKGEAGEVTLSFDTAGPALMEALAAYGRMPLPPYIKRQADEIQDDARDY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A G+VAAPTAGLHFT LL+R+ + G++ VTLHVGAGTF+PVKV+DT DH+M
Sbjct: 165 QTVFAARDGAVAAPTAGLHFTPELLARIEARGVRRALVTLHVGAGTFLPVKVDDTADHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE----DGIINPWSGFTNIF 296
HSE G + + TA A+ ++ GGR+V+ GTT+LR+LE A D + WSG T++F
Sbjct: 225 HSEWGSVPSETAAAVAETRAAGGRVVATGTTTLRILEAAAQTTAPGDDAVPAWSGETDLF 284
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFRAVD+L++NFHLP+STLLMLVSAF G E Y HAI YRF+SYGD LL
Sbjct: 285 ITPGYRFRAVDLLLTNFHLPRSTLLMLVSAFSGRERILAAYDHAIRTGYRFFSYGDACLL 344
Query: 357 FQK 359
++
Sbjct: 345 ARE 347
>gi|163731371|ref|ZP_02138818.1| S-adenosylmethionine [Roseobacter litoralis Och 149]
gi|161394825|gb|EDQ19147.1| S-adenosylmethionine [Roseobacter litoralis Och 149]
Length = 351
Score = 318 bits (816), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 171/361 (47%), Positives = 222/361 (61%), Gaps = 14/361 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RP PR SARL+V ISD +VSDLP +L+ D +V
Sbjct: 1 MKLSDFDFDLPEDLIATRPAVPRTSARLLVAKGQQ-----ISDSIVSDLPNWLSPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINR--REKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L G R + + I TL + WS +P K +K G+ + F
Sbjct: 56 LNDTRVIPARLTGARHRDTAQGPMQARIEVTLLEPDARGDWSALIKPLKKVKIGEEIIF- 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
L AT + G+ L F++ G + + ++ G +PLPPYIA +RP D RD
Sbjct: 115 ----SDVLRAT-LQSVTDGQGFLKFNLEGDDFDAALNAAGAMPLPPYIATRRPADERDKS 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LLS L + G+ +VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVFAQNNGAVAAPTASLHFDEALLSELAARGVLFSYVTLHVGAGTFLPVKVEDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A A +N+ K G R++ VGTT+LRL+ETA E G I W G T+IFI
Sbjct: 230 KMHAEWGQVSAVAAAEINATKQAGKRVIPVGTTALRLIETAGRE-GQITAWEGDTDIFIY 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+RF D LM+NFHLPKSTL+MLVSA G +E + +Y HAI+ YRF+SYGD SLL
Sbjct: 289 PGFRFNVADALMTNFHLPKSTLMMLVSALMGYDEVRTIYNHAIAEKYRFFSYGDASLLIP 348
Query: 359 K 359
K
Sbjct: 349 K 349
>gi|126735609|ref|ZP_01751354.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseobacter
sp. CCS2]
gi|126714796|gb|EBA11662.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseobacter
sp. CCS2]
Length = 350
Score = 318 bits (814), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 167/359 (46%), Positives = 231/359 (64%), Gaps = 14/359 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EFDFDLP S IA RP PR SARL+ L+ I D +V+ LP L D ++
Sbjct: 1 MKLSEFDFDLPDSLIATRPARPRSSARLL-----LAQGATIEDRIVNQLPDILQPGDRLI 55
Query: 61 FNNTKVITAQLNGVRF--CHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+L G+R ++ TL + SWS +P K ++ G+++ F
Sbjct: 56 LNDTKVIPARLFGLRHRSGEAGETAAKMDVTLLEPRADGSWSALIKPLKKVRDGEVI-VF 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
S D LEA V + + G+ L F++ G + + ++ VG +PLPPYIA KR D D
Sbjct: 115 SDD----LEAEVTGRGD-GQGYLAFNLKGDDFDAALNAVGAMPLPPYIAGKRSADDADKT 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LL+ L + G++ VTLHVGAGTF+PVKV+D DH
Sbjct: 170 DYQTYWARNSGAVAAPTASLHFDGPLLAALAARGVQFTHVTLHVGAGTFLPVKVDDVRDH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A A +N+ K+ G R++ VGTT+LRL+E+A + G++ PW+G T+IFIT
Sbjct: 230 KMHAEWGEVTADAAAEINATKAAGHRVIPVGTTALRLIESA-AQRGVMQPWTGPTDIFIT 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++F+ D LM+NFHLPKSTL+MLVSA G + + +Y HAI+ YRF+SYGD+SLL
Sbjct: 289 PGFQFQMADGLMTNFHLPKSTLMMLVSALMGTDTIRAIYAHAIAQNYRFFSYGDSSLLL 347
>gi|110680196|ref|YP_683203.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseobacter
denitrificans OCh 114]
gi|123172304|sp|Q164S6|QUEA_ROSDO RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|109456312|gb|ABG32517.1| S-adenosylmethionine [Roseobacter denitrificans OCh 114]
Length = 351
Score = 317 bits (811), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 170/362 (46%), Positives = 225/362 (62%), Gaps = 14/362 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RP PR SARL+V ISD +VSDLP +L+ D +V
Sbjct: 1 MKLSDFDFDLPEDLIATRPAVPRTSARLLVAKGRQ-----ISDSIVSDLPNWLSPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINR--REKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L G R + + I TL + +WS +P K +K + + F
Sbjct: 56 LNDTRVIPARLTGARHRDTAQGPMQARIEVTLLEPDAQGNWSALIKPLKKVKIAEEIIF- 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
RL AT + G+ +L F++ G + + ++ G +PLPPYIA +RP D RD
Sbjct: 115 ----SDRLRAT-LRAVKDGQGVLQFNLEGDDFDAALNAAGAMPLPPYIATRRPADERDKS 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LLS L + G+ +VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVFAQNSGAVAAPTASLHFDKALLSELAARGVLFSYVTLHVGAGTFLPVKVEDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A A +N+ K G R++ VGTT+LRL+ETA E G I W G T+IFI
Sbjct: 230 KMHAEWGQVSAAAAAEINATKQAGKRVIPVGTTALRLIETAGRE-GQIKAWEGDTDIFIY 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+RF D LM+NFHLPKSTL+MLVSA G +E + +Y HA++ YRF+SYGD SLL
Sbjct: 289 PGFRFNVADALMTNFHLPKSTLMMLVSALMGYDEVRAIYDHAVAEKYRFFSYGDASLLIP 348
Query: 359 KR 360
+R
Sbjct: 349 QR 350
>gi|294677090|ref|YP_003577705.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhodobacter
capsulatus SB 1003]
gi|294475910|gb|ADE85298.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhodobacter
capsulatus SB 1003]
Length = 350
Score = 315 bits (807), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 163/359 (45%), Positives = 226/359 (62%), Gaps = 13/359 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF+LP RIA+RP PR +A+L+V P+ I D V+DLP L D +V
Sbjct: 1 MNLSDFDFELPEGRIAIRPARPRTAAKLLVATPD-----AIRDLTVADLPDLLGPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRRE--KEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N TKVI A+L+G R + E + TL W A+P + +K+G+ + F
Sbjct: 56 LNTTKVIPARLSGRRTRQSAQGEVVARVEVTLLEPAPGGDWMALAKPLRKLKEGEEI-VF 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
S +R+ A G++ + F+++G + + ++ G +PLPPYIA R D +D
Sbjct: 115 SDALSARIAAIA-----EGQMRIRFNLTGPDFDAALAEAGAMPLPPYIAALRAPDEQDKT 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHFT +LL +L G++ VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVFAQKPGAVAAPTASLHFTPDLLEKLRDKGVQFTEVTLHVGAGTFLPVKVEDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A +N+ K+ GGR++ VGTT+LRL+E+A T G+I P++ T+IFI
Sbjct: 230 RMHAEWGEVTPQAAAEINATKAAGGRVIPVGTTALRLIESAATGPGVIAPFAATTDIFIY 289
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGYRFR D LM+NFHLPKSTLLMLVSA G + + +Y HA++ YRF+SYGD SLL
Sbjct: 290 PGYRFRIADALMTNFHLPKSTLLMLVSALMGQDRIRAIYDHALTKNYRFFSYGDASLLL 348
>gi|254466678|ref|ZP_05080089.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodobacterales bacterium Y4I]
gi|206687586|gb|EDZ48068.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodobacterales bacterium Y4I]
Length = 354
Score = 315 bits (807), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 168/367 (45%), Positives = 232/367 (63%), Gaps = 24/367 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP + IA RP PR SARL+V + + D V+DL +L D +V
Sbjct: 1 MKLSDFDFDLPDTLIATRPANPRSSARLLV-----AAGGSLHDGRVTDLVDWLQPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREK-------EISCTLHMRVSPNSWSVYARPSKVIKKGD 113
N+TKVI A+L+G+R RR+ +I TL + SW+ +P K I++G+
Sbjct: 56 LNDTKVIPARLSGLR-----RRDSAQGPVAAKIEATLLEPRADGSWAALLKPLKKIREGE 110
Query: 114 ILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
+ FS D + LEA G+ L F++SG + + ++ G +PLPPYIA KR D
Sbjct: 111 EI-VFSDDLSAALEAI-----EDGQGHLRFNLSGTDFDAALAEAGAMPLPPYIAAKRAAD 164
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
+D DYQT +A+ G+VAAPTA LHF + LL L + G+++ +VTLHVGAGTF+PVKVE
Sbjct: 165 EQDKTDYQTVWARNSGAVAAPTASLHFDAPLLEALKARGVEISYVTLHVGAGTFLPVKVE 224
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
D H MH+E G + A + + K+ GGR++ VGTT+LRL+E+A DG I+ W G T
Sbjct: 225 DVTTHRMHAEWGKVSEEAASEIAATKAAGGRVIPVGTTALRLIESA-ARDGQIHAWEGDT 283
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG++F+ D LM+NFHLPKSTLLMLVSA G EE +++Y HA+ YRF+SYGD
Sbjct: 284 DIFIYPGFKFQVADALMTNFHLPKSTLLMLVSALMGQEEIRRIYDHAVRSGYRFFSYGDA 343
Query: 354 SLLFQKR 360
SLL +
Sbjct: 344 SLLIPAK 350
>gi|297172494|gb|ADI23466.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [uncultured nuHF1 cluster bacterium
HF0770_35I22]
Length = 349
Score = 315 bits (807), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 165/356 (46%), Positives = 226/356 (63%), Gaps = 13/356 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M FDF LPP IA +P PR+SA+L+ V + + D + DLPA L + D +V
Sbjct: 1 MKTSNFDFSLPPELIAQKPARPRESAKLLQVFSDGN----FRDVYIKDLPALLKAGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI AQL+G F EK++ LH + S W +A+P+K + D + FFS
Sbjct: 57 VNNTRVIPAQLSGKIFS----TEKKVRVNLHKQKSNGVWLAFAKPAKKLLLNDKI-FFS- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
S A + DK G+I L F++ G + + G++PLPPYI R + D DY
Sbjct: 111 ---STFFALITDKQPFGQITLKFNLVGATFLKALKKFGSMPLPPYIKRSGKVHPSDKTDY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QTT+A G+VA+PTAGLHF+ NL++ L GI+V +TLHVGAGTF+P+K + + H M
Sbjct: 168 QTTFASRDGAVASPTAGLHFSMNLINDLKRCGIRVAPITLHVGAGTFLPIKTDTINHHRM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I+A TA +N + GG+I++VGTT LR LETA +G I+P+ G T+IFI PG
Sbjct: 228 HSEWVEINARTANLINKTRKAGGKIIAVGTTVLRTLETAVDTEGNIHPFKGKTDIFIAPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
++F+ VD+L++NFHLPKSTL +LVSAFCG+ K Y++AI YRF+SYGD SLL
Sbjct: 288 HQFKTVDLLITNFHLPKSTLFVLVSAFCGLNRMKNAYKYAIKKKYRFFSYGDASLL 343
>gi|296283991|ref|ZP_06861989.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Citromicrobium bathyomarinum JL354]
Length = 349
Score = 313 bits (802), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 180/360 (50%), Positives = 233/360 (64%), Gaps = 11/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLPP RIALRPV PRD+A+++VV + + P +D V DLP L + D +V
Sbjct: 1 MKVDLFDFDLPPERIALRPVSPRDAAKMLVV--DGAAPF--ADRQVRDLPDLLRAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI AQL G R I TLH R+ W + R +K +++GD + F
Sbjct: 57 FNDTRVIPAQLEGERIRE-GASGAAIGATLHKRIDARRWQAFVRNAKRLREGDTIRF--P 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DG + T + G L F+ G +E ++ G +PLPPYIA++R D RD DY
Sbjct: 114 DG---ISVTAEARAEDGSWTLAFA-GGEPVEELLARAGAMPLPPYIAQRRAADERDAQDY 169
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A G+VAAPTA LHFT L+ RL + GI +TLHVGAGTF+PVK +DT H M
Sbjct: 170 QTLFADKAGAVAAPTAALHFTPALVERLDAAGIVRETLTLHVGAGTFLPVKADDTAQHKM 229
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G I A A LN+ ++ G R+++VGTTSLRLLE+A ++ I P++G T+IFITPG
Sbjct: 230 HAEWGEITAEAAARLNAARAEGRRVIAVGTTSLRLLESAADQNHTIQPFAGDTDIFITPG 289
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
Y FRAVD LM+NFHLPKSTL+MLVSA G E + Y +AI+H YRFYSYGD+SLL R
Sbjct: 290 YEFRAVDGLMTNFHLPKSTLMMLVSALMGRERMMEAYAYAIAHEYRFYSYGDSSLLLPPR 349
>gi|114771126|ref|ZP_01448566.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [alpha
proteobacterium HTCC2255]
gi|114548408|gb|EAU51294.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [alpha
proteobacterium HTCC2255]
Length = 348
Score = 313 bits (802), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 171/359 (47%), Positives = 233/359 (64%), Gaps = 14/359 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF+LP IALRPV PR S++L+V + +I D + +L +L D +V
Sbjct: 1 MKLSDFDFELPNELIALRPVHPRSSSKLLVSKDDK----IIDDQFL-NLLKYLKKGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHIN--RREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+L+G R H + R I L + W A+P+K + G+I++F
Sbjct: 56 LNDTKVIPAKLHGKRIRHSDNGRTTANIGINLLSTNNDGHWLALAKPAKRVNVGEIINF- 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ L A V+DK + G ++L F++S ++++ +GT+PLPPYIA +R D D
Sbjct: 115 ----DNELTAKVLDKSSNG-LVLQFNLSEEIFDQKLKEIGTMPLPPYIASQRLPDKFDDN 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ GSVAAPTA LHF LL +L GIK VTLHVGAGTF+PVKV++ DH
Sbjct: 170 DYQTVFAEKSGSVAAPTASLHFDDVLLKQLNDFGIKTSKVTLHVGAGTFLPVKVDNIADH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE G ++ A + KS GGRI+ VGTT+LRL+ETA + G IN W+G T+IFIT
Sbjct: 230 KMHSEWGEVNNIAASEIAKTKSEGGRIIPVGTTALRLIETA-AKSGKINSWTGDTDIFIT 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++F+ D L++NFHLPKSTLLMLVSA G E+ K +Y HAI++ YRF+SYGD SLL
Sbjct: 289 PGFKFKIADGLITNFHLPKSTLLMLVSALIGTEKLKNVYLHAINNRYRFFSYGDASLLL 347
>gi|209543312|ref|YP_002275541.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Gluconacetobacter diazotrophicus PAl 5]
gi|209530989|gb|ACI50926.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Gluconacetobacter diazotrophicus PAl 5]
Length = 355
Score = 313 bits (801), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 165/357 (46%), Positives = 218/357 (61%), Gaps = 14/357 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDFDLPP+ IA P PRDSARL+ ++ D +V DLP+ L D +V
Sbjct: 4 LASDFDFDLPPALIAEHPARPRDSARLL----DIPAAGPFHDRIVRDLPSLLRPGDLLVA 59
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T VI AQL+ R E I TL + +W AR ++ ++ GD+L F
Sbjct: 60 NDTAVIPAQLDA------RRGEARIGITLDRILPDGTWHALARNARRLRAGDVLTFPGTP 113
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
A VI + + G ++L F G + + G + LPPYIAR +D VDY
Sbjct: 114 NT----AAVISRDDEGGVVLRFDTEGAAFDAFLQAAGVLALPPYIARPFGPTEQDRVDYA 169
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T ++ +G+VAAPTAGLHFT +LL+ L + G+ +TLHVGAGTF+PV+ + H MH
Sbjct: 170 TIFSAHRGAVAAPTAGLHFTPDLLAALDAAGVGRCTLTLHVGAGTFLPVRGDSIAAHRMH 229
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
+E G I A TA A+N+ + GGRIV+VGTTSLRLLE+A DG I P+ G T IFI PGY
Sbjct: 230 AERGVITAETADAINAARRAGGRIVAVGTTSLRLLESAADPDGTIRPFDGDTAIFIRPGY 289
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
RFRAVD+LM+NFHLP+STL MLV AF G + + Y HA++ YRFYSYGD LL +
Sbjct: 290 RFRAVDVLMTNFHLPRSTLFMLVCAFAGYDRMRDAYAHAVADGYRFYSYGDACLLHR 346
>gi|163746642|ref|ZP_02153999.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Oceanibulbus indolifex HEL-45]
gi|161379756|gb|EDQ04168.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Oceanibulbus indolifex HEL-45]
Length = 348
Score = 312 bits (800), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 164/359 (45%), Positives = 226/359 (62%), Gaps = 14/359 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RP PR SARL+V + D V+DL +L D +V
Sbjct: 1 MKLSDFDFDLPEELIATRPANPRSSARLLVAEGA-----QLHDRRVTDLTDWLRPGDRLV 55
Query: 61 FNNTKVITAQLNGVRF--CHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L+G+R + +I TL +WS +P + +K G+ + F
Sbjct: 56 LNDTRVIPARLSGLRHRASAQGAVQAKIEVTLLEPRGDGTWSALIKPLRKLKIGEEV-IF 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
S D ++ LEA G+ L F+ +G + + ++ G +PLPPYIA KR DA+D
Sbjct: 115 SDDLRATLEAV-----EDGQGHLRFNCAGDDFDAALNAAGAMPLPPYIAAKRAADAQDMT 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LL+ L + G+ VTLHVGAGTF+PVKV+D +H
Sbjct: 170 DYQTVFARHAGAVAAPTASLHFDETLLAALAAKGVTFSHVTLHVGAGTFLPVKVDDISEH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A A+ + + ++ GGR++ VGTT+LRL+ETA DG I W G T+IFIT
Sbjct: 230 KMHAEWGRVSAEAAEEITATRAAGGRVIPVGTTALRLIETA-ARDGQITAWEGDTDIFIT 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG+ F D LM+NFHLPKSTL+MLVSA G+++ K +Y HAI+ YRF+SYGD+SLL
Sbjct: 289 PGFTFNVTDGLMTNFHLPKSTLMMLVSALMGVQQVKDIYAHAIAEKYRFFSYGDSSLLL 347
>gi|162146698|ref|YP_001601157.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Gluconacetobacter diazotrophicus PAl 5]
gi|189038525|sp|A9HBI8|QUEA_GLUDA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|161785273|emb|CAP54819.1| putative s-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Gluconacetobacter diazotrophicus PAl 5]
Length = 355
Score = 312 bits (800), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 165/357 (46%), Positives = 218/357 (61%), Gaps = 14/357 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDFDLPP+ IA P PRDSARL+ ++ D +V DLP+ L D +V
Sbjct: 4 LASDFDFDLPPALIAEHPARPRDSARLL----DIPAAGPFHDRIVRDLPSLLRPGDLLVA 59
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T VI AQL+ R E I TL + +W AR ++ ++ GD+L F
Sbjct: 60 NDTAVIPAQLDA------RRGEARIGITLDRILPDGTWHALARNARRLRAGDVLTFPGTP 113
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
A VI + + G ++L F G + + G + LPPYIAR +D VDY
Sbjct: 114 NT----AAVISRDDEGGVVLRFDTEGAAFDAFLQAAGVLALPPYIARPFGPTEQDRVDYA 169
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T ++ +G+VAAPTAGLHFT +LL+ L + G+ +TLHVGAGTF+PV+ + H MH
Sbjct: 170 TIFSAHRGAVAAPTAGLHFTPDLLAALDAAGVGRCTLTLHVGAGTFLPVRGDSIAAHRMH 229
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
+E G I A TA A+N+ + GGRIV+VGTTSLRLLE+A DG I P+ G T IFI PGY
Sbjct: 230 AERGVITAETADAINAARRAGGRIVAVGTTSLRLLESAADPDGTIRPFDGDTAIFIRPGY 289
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
RFRAVD+LM+NFHLP+STL MLV AF G + + Y HA++ YRFYSYGD LL +
Sbjct: 290 RFRAVDVLMTNFHLPRSTLFMLVCAFAGYDRMRDAYAHAVADGYRFYSYGDACLLHR 346
>gi|114570417|ref|YP_757097.1| queuosine biosynthesis protein [Maricaulis maris MCS10]
gi|122315730|sp|Q0ANH8|QUEA_MARMM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|114340879|gb|ABI66159.1| Queuosine biosynthesis protein [Maricaulis maris MCS10]
Length = 353
Score = 312 bits (799), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 173/361 (47%), Positives = 236/361 (65%), Gaps = 11/361 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDF LP +RIALRP PRD+AR++ V N V +D V DLP L D +V
Sbjct: 1 MRVSDFDFHLPEARIALRPARPRDAARMLHVASNG----VFADRGVRDLPDLLQPGDLMV 56
Query: 61 FNNTKVITAQLNGVRFCHI--NRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
FN+T+VI A L G+R E+ LH R+ ++W + RP+K ++ GD + F
Sbjct: 57 FNDTRVIPAALKGIRPARAVGGGGPVEVEVNLHKRIDASAWRAFVRPAKRLRMGDEIAF- 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
G++ L+A V K G++ LVF+ +G L+ I++ G +PLPPYIARKR +D +D
Sbjct: 116 ---GET-LKAEVTGKSEGGDVRLVFNAAGAALDAAIAVAGEMPLPPYIARKRGVDEKDEA 171
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A +GSVAAPTAGLHFT L++ L + G++ VTLHVGAGTF+PVK +DTDDH
Sbjct: 172 DYQTLFATHEGSVAAPTAGLHFTPELMAALEARGVEQTRVTLHVGAGTFLPVKSDDTDDH 231
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE + A A A+N+ K+ G R++ VGTT+LR +E+ + GI+ S T+IF+T
Sbjct: 232 QMHSEWCTVSAEAADAINAAKAEGRRVIPVGTTALRTIESLASGPGIVRAGSRDTDIFLT 291
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG F D+LM+NFHLPKSTL MLVSA G++ ++ Y HAI+ YRFYSYGD LL +
Sbjct: 292 PGSDFAITDMLMTNFHLPKSTLFMLVSALSGLDVMQRAYAHAIAAEYRFYSYGDACLLER 351
Query: 359 K 359
+
Sbjct: 352 R 352
>gi|254460455|ref|ZP_05073871.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodobacterales bacterium HTCC2083]
gi|206677044|gb|EDZ41531.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodobacteraceae bacterium HTCC2083]
Length = 352
Score = 312 bits (799), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 165/363 (45%), Positives = 224/363 (61%), Gaps = 14/363 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA RP PR SARL++ I D VSDL D +V
Sbjct: 1 MKLSDFDFYLPEDLIATRPAKPRSSARLLLAKDG-----AIKDAYVSDLVKIFQPGDLLV 55
Query: 61 FNNTKVITAQLNGVRFCHI--NRREKEISCTLHMRVS-PNSWSVYARPSKVIKKGDILHF 117
NNTKVI A+L GVR E +I TL ++ P +W +P + +K+G+++ F
Sbjct: 56 LNNTKVIPARLFGVRKRESVHGSGEAKIEVTLLEPIATPGTWQALIKPLRKVKEGEVMVF 115
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L AT+ DK + G+ L F++ G + + ++ G +PLPPYIA +RP DA+D
Sbjct: 116 -----SETLSATLTDK-DDGQGTLQFNLLGDDFDTALAEAGAMPLPPYIAARRPADAQDK 169
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT +A+ G+VAAPTA LHF + LL L ++ VTLHVGAGTF+PVKVED
Sbjct: 170 DDYQTVFAQHSGAVAAPTASLHFDAALLGELKERCVEFAEVTLHVGAGTFLPVKVEDVTT 229
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+E G +D A + + K G R++ VGTT+LRL+E+A + G I PW G T+IFI
Sbjct: 230 HKMHAEWGQVDETAADQITAAKREGRRVIPVGTTALRLIESAAAQTGEIAPWEGETDIFI 289
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++F D LM+NFHLPKSTL+MLVSA G E ++Y HAI++ YRF+SYGD+SLL
Sbjct: 290 YPGFKFNVADALMTNFHLPKSTLMMLVSALMGKERVDQIYTHAIANEYRFFSYGDSSLLV 349
Query: 358 QKR 360
++
Sbjct: 350 PEK 352
>gi|258541319|ref|YP_003186752.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Acetobacter
pasteurianus IFO 3283-01]
gi|256632397|dbj|BAH98372.1| tRNA ribosyltransferase/isomerase [Acetobacter pasteurianus IFO
3283-01]
gi|256635454|dbj|BAI01423.1| tRNA ribosyltransferase/isomerase [Acetobacter pasteurianus IFO
3283-03]
gi|256638509|dbj|BAI04471.1| tRNA ribosyltransferase/isomerase [Acetobacter pasteurianus IFO
3283-07]
gi|256641563|dbj|BAI07518.1| tRNA ribosyltransferase/isomerase [Acetobacter pasteurianus IFO
3283-22]
gi|256644618|dbj|BAI10566.1| tRNA ribosyltransferase/isomerase [Acetobacter pasteurianus IFO
3283-26]
gi|256647673|dbj|BAI13614.1| tRNA ribosyltransferase/isomerase [Acetobacter pasteurianus IFO
3283-32]
gi|256650726|dbj|BAI16660.1| tRNA ribosyltransferase/isomerase [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256653717|dbj|BAI19644.1| tRNA ribosyltransferase/isomerase [Acetobacter pasteurianus IFO
3283-12]
Length = 360
Score = 311 bits (798), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 162/354 (45%), Positives = 224/354 (63%), Gaps = 14/354 (3%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++FDF LP S IA P PR++ARL+ + + P + +D + DLP+ L D +V N
Sbjct: 6 TEDFDFHLPESLIAQEPARPREAARLL----DATQPDMFADRHIRDLPSLLKRGDLLVAN 61
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NT VI AQL+G+R E +I TL SW V R ++ +K GD + F
Sbjct: 62 NTAVIRAQLHGLR------GEAKIGITLDQIQPDGSWHVLVRNARRLKVGDTIAFPGVQD 115
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+R++A G +L FS G + + G + LPPYI R A+D DY T
Sbjct: 116 TARVQAL----EPGGGAVLQFSAEGDAFDAFLQKAGALALPPYIHRPEGPTAQDTSDYAT 171
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
+ + +G+VAAPTAGLHFT LL + + G + +TLHVGAGTF+PV+ + +H MHS
Sbjct: 172 IFERNKGAVAAPTAGLHFTPALLKAIDATGAQRCTLTLHVGAGTFLPVREAEISEHKMHS 231
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E G I TA+ +N+ + GGRI+++GTTSLRLLETAT E+GI++P+ G T+IFI PGY+
Sbjct: 232 ERGIITPETAERINATRKAGGRIIAIGTTSLRLLETATDENGIVHPFDGTTSIFIRPGYQ 291
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
FRAVD+L++NFHLP+STL MLVSAF G+E +++Y HA++ YRFYSYGD LL
Sbjct: 292 FRAVDMLLTNFHLPRSTLFMLVSAFAGVERARQIYAHAVASGYRFYSYGDACLL 345
>gi|163742741|ref|ZP_02150126.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Phaeobacter
gallaeciensis 2.10]
gi|161383996|gb|EDQ08380.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Phaeobacter
gallaeciensis 2.10]
Length = 356
Score = 311 bits (797), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 165/358 (46%), Positives = 228/358 (63%), Gaps = 14/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP RIA RP PR SARL+V + I D V++L +L S D +V
Sbjct: 1 MKLSDFDFDLPDDRIATRPAVPRSSARLLVAEGDR-----IRDARVANLGQWLRSGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINR--REKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+L+G+R + ++ TL + SW+ +P K +K G+ + F
Sbjct: 56 LNDTKVIPARLSGLRHRDTAQGPMAAKVEVTLLDPGADGSWAALLKPLKKVKPGEEIVF- 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
L AT +++ G+ L F++SG + + ++ G +PLPPYIA KRP D +D
Sbjct: 115 ----SDALSAT-LERVEDGQGHLKFNLSGTDFDAALAEAGAMPLPPYIAAKRPADEQDKT 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LL+ L + G+++ +VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVWARNSGAVAAPTASLHFDDALLAELQAKGVEISYVTLHVGAGTFLPVKVEDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A A + + K+ GGR++ VGTT+LRL+E+A + G I PW G T+IFI
Sbjct: 230 RMHAEWGRVSAEAATEIAATKAAGGRVIPVGTTALRLIESA-GQSGAIQPWEGDTDIFIY 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PG+ F D LM+NFHLPKSTLLMLVSA G + + +Y HA++ YRF+SYGD SLL
Sbjct: 289 PGFTFHVADALMTNFHLPKSTLLMLVSALMGQDRIRAIYDHALAEEYRFFSYGDASLL 346
>gi|296114522|ref|ZP_06833175.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Gluconacetobacter hansenii ATCC 23769]
gi|295978878|gb|EFG85603.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Gluconacetobacter hansenii ATCC 23769]
Length = 352
Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 165/358 (46%), Positives = 223/358 (62%), Gaps = 14/358 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+V +FDFDLP + IA P PRDSAR++ V P + D V DLP L + D +V
Sbjct: 4 LVSDFDFDLPVALIADHPARPRDSARMLEVPPQGA----FCDRHVRDLPGCLRAGDILVA 59
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T VI AQL +R I TL + +W AR S+ +K GDIL F
Sbjct: 60 NDTAVIPAQLAAMRGA------ARIGITLDRILPDGTWHALARNSRRLKPGDILTF---- 109
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
S + A V+ + G +++ F + G ++ + G + LPPYIAR D DY
Sbjct: 110 APSAVTAEVVVCEDAGGVVMRFDVEGEAFDQFLHDTGHLALPPYIARPDGPTEEDRKDYS 169
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A+ +G+VAAPTAGLHFT LLS L + G+ +TLHVGAGTF+P++ E +H MH
Sbjct: 170 TIFAQHRGAVAAPTAGLHFTPALLSGLEAAGVLRQTLTLHVGAGTFLPMRSEQISEHRMH 229
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
+E G I A A +N+ ++ GGR+++VGTTSLRLLE+AT EDG+++P+ G T IFI PGY
Sbjct: 230 AERGTITAHAAHRINAARAAGGRVIAVGTTSLRLLESATDEDGVVHPFHGETAIFIRPGY 289
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
RFRAVD+L++NFHLP+STL MLVSAF G + Y+HA++ YRFYSYGD LL +
Sbjct: 290 RFRAVDMLLTNFHLPRSTLFMLVSAFAGQARMRAAYEHAMAAGYRFYSYGDACLLHRN 347
>gi|329114921|ref|ZP_08243677.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Acetobacter
pomorum DM001]
gi|326695818|gb|EGE47503.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Acetobacter
pomorum DM001]
Length = 358
Score = 310 bits (794), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 163/354 (46%), Positives = 224/354 (63%), Gaps = 14/354 (3%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++FDF LP S IA P PR++ARL+ + + P + +D + DLP+ L D +V N
Sbjct: 6 TEDFDFHLPESLIAQEPARPREAARLL----DATQPGIFADRHIRDLPSLLKRGDLLVAN 61
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NT VI AQL+G+R E +I TL SW V R ++ +K GDI+ F
Sbjct: 62 NTAVIRAQLHGLR------GEAKIGITLDQIQPDGSWHVLVRNARRLKVGDIIAFPGVQD 115
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+R V+ G +L FS G + + G + LPPYI R A+D DY T
Sbjct: 116 IAR----VLALEPGGGAVLRFSAEGDAFDVFLQKAGALALPPYIHRPEGPTAQDTSDYAT 171
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
+ + +G+VAAPTAGLHFT LL + + G + +TLHVGAGTF+PV+ + +H MHS
Sbjct: 172 IFERNKGAVAAPTAGLHFTPALLKAVDATGAQRCTLTLHVGAGTFLPVREAEISEHKMHS 231
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E G I TA+ +N+ + GGRI+++GTTSLRLLETAT E+GI++P+ G T+IFI PGY+
Sbjct: 232 ERGIITPETAERINTTRKAGGRIIAIGTTSLRLLETATDENGIVHPFDGTTSIFIRPGYQ 291
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
FRAVD+L++NFHLP+STL MLVSAF G+E +++Y HA++ YRFYSYGD LL
Sbjct: 292 FRAVDMLLTNFHLPRSTLFMLVSAFAGVERARQIYAHAVASGYRFYSYGDACLL 345
>gi|83954337|ref|ZP_00963057.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sulfitobacter sp. NAS-14.1]
gi|83841374|gb|EAP80544.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sulfitobacter sp. NAS-14.1]
Length = 354
Score = 309 bits (792), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 167/363 (46%), Positives = 226/363 (62%), Gaps = 18/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF+LP IA RP PR SA+++V + ++D V+++ +L D +V
Sbjct: 1 MKLSDFDFELPERLIATRPAVPRTSAKMLVAQGDH-----MTDTTVANMSDWLRPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRRE----KEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
N+T+VI A+L+G+R H N + I TL W+ +P K +K + +
Sbjct: 56 LNDTRVIPARLSGLR--HRNSVQGPVQARIEVTLLEPRGDADWTALIKPLKKLKIDETV- 112
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
FS D +RL G+ L F+ SG + + ++ G +PLPPYIA KRP DA+D
Sbjct: 113 VFSADLSARLVGV-----EDGQGRLRFNCSGDDFDAALNDAGAMPLPPYIAGKRPADAQD 167
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT +AK G+VAAPTA LHF LL +L +G++ VTLHVGAGTF+PVKV+D
Sbjct: 168 MTDYQTVFAKNAGAVAAPTASLHFDQLLLDQLAEMGVRFSHVTLHVGAGTFLPVKVDDIA 227
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
DH MHSE G + A A +++ K+ GGR++ VGTT+LRL+ETA G I PW G T+IF
Sbjct: 228 DHKMHSEWGQVSAQAAAEISATKAAGGRVIPVGTTALRLVETA-ARSGNIQPWEGDTDIF 286
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPG+ F D LM+NFHLPKSTL+MLVSA G + +K+Y HAI YRF+SYGD SLL
Sbjct: 287 ITPGFEFNVADALMTNFHLPKSTLMMLVSALMGQKTIQKIYNHAIESNYRFFSYGDASLL 346
Query: 357 FQK 359
F K
Sbjct: 347 FPK 349
>gi|83943202|ref|ZP_00955662.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sulfitobacter sp. EE-36]
gi|83846210|gb|EAP84087.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sulfitobacter sp. EE-36]
Length = 354
Score = 309 bits (792), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 166/361 (45%), Positives = 225/361 (62%), Gaps = 14/361 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF+LP IA RP PR SA+++V + ++D V+++ +L D +V
Sbjct: 1 MKLSDFDFELPERLIATRPAVPRTSAKMLVAQGDH-----MTDTTVANMSDWLRPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRR--EKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L+G+R + + I TL W+ +P K +K + + F
Sbjct: 56 LNDTRVIPARLSGLRHRESAQGPVQARIEVTLLEPRGDADWTALIKPLKKLKIDETV-VF 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
S D +RL G+ L F+ SG + + ++ G +PLPPYIA KRP DA+D
Sbjct: 115 SADLSARLVGV-----EDGQGRLRFNCSGDDFDAALNDAGAMPLPPYIAGKRPADAQDMT 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +AK G+VAAPTA LHF LL +L +IG+ VTLHVGAGTF+PVKV+D DH
Sbjct: 170 DYQTVFAKNAGAVAAPTASLHFDQPLLDQLAAIGVCFSHVTLHVGAGTFLPVKVDDIADH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE G + A A +++ K+ GGR++ VGTT+LRL+ETA G I PW G T+IFIT
Sbjct: 230 KMHSEWGQVSAQAAAEISATKAAGGRVIPVGTTALRLVETA-ARSGNIQPWEGDTDIFIT 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ F D LM+NFHLPKSTL+MLVSA G + +K+Y HAI YRF+SYGD SLLF
Sbjct: 289 PGFEFNVADALMTNFHLPKSTLMMLVSALMGQKTIQKIYNHAIESNYRFFSYGDASLLFP 348
Query: 359 K 359
K
Sbjct: 349 K 349
>gi|259418623|ref|ZP_05742540.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Silicibacter sp. TrichCH4B]
gi|259344845|gb|EEW56699.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Silicibacter sp. TrichCH4B]
Length = 369
Score = 308 bits (790), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 165/360 (45%), Positives = 228/360 (63%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RP PR SARL+V + I+D V+DL +LN+ D +V
Sbjct: 21 MKLSDFDFDLPEDLIATRPAVPRSSARLLVAEQDR-----ITDARVTDLLQWLNAGDRLV 75
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV----SPNSWSVYARPSKVIKKGDILH 116
N+T+VI A+L+G R H + +S + + + + WS +P K IK G+ +
Sbjct: 76 LNDTRVIPARLSGQR--HRTSAQGPVSARIEVTLLEPQADGCWSGLLKPLKKIKIGETVR 133
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
F DG S V++ G+ L F+++G + + ++ G +PLPPYIA KRP D +D
Sbjct: 134 F--SDGLSAELVDVVE----GQGRLRFNLAGDDFDAALAEAGAMPLPPYIAAKRPADEQD 187
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT +A+ G+VAAPTA LHF LL+ L + G++ +VTLHVGAGTF+PVKVED
Sbjct: 188 KTDYQTVWARSSGAVAAPTASLHFDEPLLAALAAKGVEFTYVTLHVGAGTFLPVKVEDVT 247
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H MH+E G + A A + + K+ G R++ VGTT+LRL+E+A + G I PW G T+IF
Sbjct: 248 SHKMHAEWGQVTAKAAAEIAATKAAGKRVIPVGTTALRLIESAARDSGAIAPWEGETDIF 307
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PG+ FR D LM+NFHLPKSTL+MLVSA G E + +Y HA++ YRF+SYGD SLL
Sbjct: 308 IYPGFTFRVADALMTNFHLPKSTLMMLVSALMGQERMRSVYAHAVTERYRFFSYGDASLL 367
>gi|159043729|ref|YP_001532523.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Dinoroseobacter shibae DFL 12]
gi|189038520|sp|A8LI68|QUEA_DINSH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|157911489|gb|ABV92922.1| queuosine biosynthesis protein [Dinoroseobacter shibae DFL 12]
Length = 353
Score = 308 bits (789), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 165/363 (45%), Positives = 225/363 (61%), Gaps = 15/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP + IA RP PR SARL+V P D V+DL L D +V
Sbjct: 1 MHLSDFDFDLPETLIATRPARPRSSARLLVAEAR--GPF--RDRRVTDLVDELQPGDRLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV---SPNSWSVYARPSKVIKKGDILHF 117
NNTKVI A+L G R H + + +S + + + + W+ A+P + + +G+ + F
Sbjct: 57 LNNTKVIPARLFGTR--HRDSAQGPVSAKVEITLLEPASEGWTALAKPLRKLAEGEEIVF 114
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L ATV ++ + LVF+ +G + + ++ G +PLPPYIA KR DA+D
Sbjct: 115 -----SDALRATVAER-GADRVRLVFNCTGDDFDAALAQAGAMPLPPYIAAKRAADAQDR 168
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT +A +G+VAAPTA LHF LL+ L + G++ FVTLHVGAGTF+PVKV+D
Sbjct: 169 DDYQTVFAARKGAVAAPTASLHFDEALLAALRARGVEFSFVTLHVGAGTFLPVKVDDVTT 228
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MHSE G I A + + ++ G R++ VGTT+LRL+ETA + G PW G T+IFI
Sbjct: 229 HKMHSEWGEISDQAAAEILATRADGRRVIPVGTTALRLIETAAAQPGGFGPWEGDTDIFI 288
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG+ FR D LM+NFHLPKSTL+MLVSA G E +++Y HAI+ YRF+SYGD+SLL
Sbjct: 289 YPGFEFRITDGLMTNFHLPKSTLMMLVSALMGAERIREIYAHAIAQEYRFFSYGDSSLLL 348
Query: 358 QKR 360
R
Sbjct: 349 PDR 351
>gi|254450756|ref|ZP_05064193.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Octadecabacter antarcticus 238]
gi|198265162|gb|EDY89432.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Octadecabacter antarcticus 238]
Length = 350
Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 165/361 (45%), Positives = 232/361 (64%), Gaps = 14/361 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP + IA+RPV PR SA+L+V + D V+DL + L + D +V
Sbjct: 1 MKLSDFDFDLPDTLIAVRPVRPRSSAKLLVADGPET-----HDLQVTDLRSVLQAGDHLV 55
Query: 61 FNNTKVITAQLNG--VRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+L G +R +I TL + +W+ +P + ++ G+ + F
Sbjct: 56 LNDTKVIPARLFGERIRKSPDGAGLAKIEVTLLEPQADGTWAALIKPLRKVRDGERI-VF 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
SQD L A ++ +++ G L F++ + + ++ VG +PLPPYIA KRP D D
Sbjct: 115 SQD----LSAMLVHRYD-GMGYLEFNVKDDDFDTALNAVGAMPLPPYIAAKRPADDLDKD 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LL LI++G+K+ +VTLHVGAGTF+PVKV+D DH
Sbjct: 170 DYQTVWARASGAVAAPTASLHFEQWLLDDLIAMGVKISYVTLHVGAGTFVPVKVDDVADH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
+MHSE G + A A + + K+ GGR++ VGTT+ RL+ETA G + W G T+IFIT
Sbjct: 230 VMHSEWGQVSALAASDIMATKAAGGRVIPVGTTACRLIETAGAS-GTLVEWEGETDIFIT 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ F+ D LM+NFHLPKSTL+MLVSA G + K +Y HAI++ YRF+SYGD S+L
Sbjct: 289 PGFEFQITDGLMTNFHLPKSTLMMLVSALMGTQRIKDIYAHAIANEYRFFSYGDASILLP 348
Query: 359 K 359
K
Sbjct: 349 K 349
>gi|84684975|ref|ZP_01012875.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Maritimibacter alkaliphilus HTCC2654]
gi|84667310|gb|EAQ13780.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodobacterales bacterium HTCC2654]
Length = 355
Score = 307 bits (787), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 162/355 (45%), Positives = 225/355 (63%), Gaps = 12/355 (3%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++DFDLP IA RP PR SARL+V I+D +V+DL +L D +V N
Sbjct: 10 LSDYDFDLPEDLIATRPARPRSSARLLVAERAR-----ITDGVVTDLVDWLRPGDRLVLN 64
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+VI A+L G R + E++ L P +WS +P + +K G+ + F +
Sbjct: 65 DTRVIPARLEGTRTRGEAQARIEVTL-LAPDAQPGAWSALVKPLRKVKDGETIDFAAG-- 121
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
L ATV+ + + G+ +L F+++G + ++ G +PLPPYI KR DA+D DYQT
Sbjct: 122 ---LSATVLSR-SEGQAVLTFNLTGAAFDAALAEAGRMPLPPYIEAKRRADAQDREDYQT 177
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
+A+ G+VAAPTA LHF LL+ L + G+ VTLHVGAGTF+PVKV+D DH MH+
Sbjct: 178 VWARQTGAVAAPTASLHFDDALLAALDARGVARTHVTLHVGAGTFLPVKVDDVSDHKMHA 237
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E G + A +N+ ++ GGRI+ VGTT+LRL+E+A G I PW G T+IFI PGY
Sbjct: 238 EWGEVTEAAAAEINATRAAGGRIIPVGTTALRLIESAAAAPGRIEPWRGPTDIFIRPGYA 297
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+ D LM+NFHLPKSTL+MLVSA G+E +++Y HAI + YRF+SYGD SLL
Sbjct: 298 FKITDGLMTNFHLPKSTLMMLVSALMGMERMREVYAHAIENRYRFFSYGDASLLL 352
>gi|126739327|ref|ZP_01755020.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseobacter
sp. SK209-2-6]
gi|126719427|gb|EBA16136.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseobacter
sp. SK209-2-6]
Length = 356
Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 169/359 (47%), Positives = 222/359 (61%), Gaps = 14/359 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP + IA RP PR SAR++V + P I D V+DL +L D +V
Sbjct: 1 MKLSDFDFDLPETLIATRPASPRSSARMLV-----ATPQEIHDQTVTDLIDWLKPGDRLV 55
Query: 61 FNNTKVITAQLNGVRF--CHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+L+G+R + I TL S SW+ +P K IK G+ + F
Sbjct: 56 LNDTKVIPARLSGLRHRESAQGKTAARIEVTLLEPRSDGSWAGLLKPLKKIKLGERIVF- 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
D S V D G+ LL F++ G + + ++ G +PLPPYIA KR DA+D
Sbjct: 115 -SDALSAELVGVED----GQGLLSFNLQGEDFDAALAQAGAMPLPPYIAAKRAADAQDKT 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +AK G+VAAPTA LHF + LL L G+K VTLHVGAGTF+PVKV+D H
Sbjct: 170 DYQTVWAKNSGAVAAPTASLHFDTALLEALQEKGVKFTHVTLHVGAGTFLPVKVDDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A + K+ GGR++ VGTT+LRL+E+A DG + PW G T+IFI
Sbjct: 230 KMHAEWGKVSEQAASEIAETKAAGGRVIPVGTTALRLIESA-ARDGRVEPWEGETDIFIY 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG+ F+A D LM+NFHLPKSTLLML+SA G E +++Y HA+ YRF+SYGD SLL
Sbjct: 289 PGFSFQATDALMTNFHLPKSTLLMLISALMGQERVREIYAHAVEGEYRFFSYGDASLLL 347
>gi|99080934|ref|YP_613088.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ruegeria
sp. TM1040]
gi|122398114|sp|Q1GHP0|QUEA_SILST RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|99037214|gb|ABF63826.1| Queuosine biosynthesis protein [Ruegeria sp. TM1040]
Length = 349
Score = 306 bits (785), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 166/360 (46%), Positives = 222/360 (61%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RP PR SARL+V + ISD V+DL +L D +V
Sbjct: 1 MKLGDFDFDLPEELIATRPAVPRSSARLLVAEQDR-----ISDGRVTDLLDWLAPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV----SPNSWSVYARPSKVIKKGDILH 116
N+T+VI A+L+G R H N + +S + + + + SW+ +P K IK G+ L
Sbjct: 56 LNDTRVIPARLSGQR--HRNSAQGPVSARIEVTLLEPQADGSWAGLLKPLKKIKIGETLR 113
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
F D S V+D G+ L F+++G + + ++ G +PLPPYIA KRP D +D
Sbjct: 114 F--SDALSAELVDVVD----GQGRLRFNLAGDDFDAALAEAGAMPLPPYIAAKRPADEQD 167
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT +A+ G+VAAPTA LHF LL L G+ +VTLHVGAGTF+PVKVED
Sbjct: 168 KTDYQTVWARNSGAVAAPTASLHFDEPLLKALSEKGVTFTYVTLHVGAGTFLPVKVEDVT 227
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H MH+E G + A + + K+ G R++ VGTT+LRL+E+A E G I PW G T+IF
Sbjct: 228 THKMHAEWGQVTPEAAAEIAATKAAGNRVIPVGTTALRLIESAARESGAITPWEGETDIF 287
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PG+ FR D LM+NFHLPKSTL+MLVSA G + + +Y HA+ YRF+SYGD SLL
Sbjct: 288 IYPGFEFRVADALMTNFHLPKSTLMMLVSALMGQDRIRAIYAHAVKERYRFFSYGDASLL 347
>gi|255261251|ref|ZP_05340593.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Thalassiobium sp. R2A62]
gi|255103586|gb|EET46260.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Thalassiobium sp. R2A62]
Length = 348
Score = 306 bits (784), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 168/361 (46%), Positives = 236/361 (65%), Gaps = 21/361 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP RIA+RP PR SARL++ + I D +V+DL L D +V
Sbjct: 1 MKLSDFDFDLPDDRIAVRPTQPRSSARLLLARGD-----DILDRVVTDLIDILQPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV----SPNSWSVYARPSKVIKKGDILH 116
N+T+VI A+L+G R H N + +S + + + + +W+ +P K + +G+ +
Sbjct: 56 LNDTRVIPARLSGQR--HRNSAQGPVSAAIDVTLLTPQADGAWTALIKPLKKVTEGEDI- 112
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
FS D L AT+I K + G+ L F+++G + + ++ G +PLPPYIA KR DA+D
Sbjct: 113 VFSDD----LSATLIGKED-GQGRLKFNLTGDDFDAALAAAGAMPLPPYIAAKRAADAQD 167
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+ DYQT +A+ QG+VAAPTA LHF LL L + GI+ +VTLHVGAGTF+PVKV++
Sbjct: 168 HTDYQTVWARHQGAVAAPTASLHFDQPLLEALNAKGIQFTYVTLHVGAGTFLPVKVDNIA 227
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
DH MHSE G I A A+NS GR++ VGTT+LRL+E+A ++G + W G T+IF
Sbjct: 228 DHKMHSEWGQITHAAADAINSTT---GRVIPVGTTALRLIESA-AQNGRLAAWEGPTDIF 283
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPG++F+ D LM+NFHLPKSTL+MLVSA G + K +Y HA+ H YRF+SYGD+SLL
Sbjct: 284 ITPGFKFQIADGLMTNFHLPKSTLMMLVSALMGTQNIKDIYAHALRHEYRFFSYGDSSLL 343
Query: 357 F 357
Sbjct: 344 L 344
>gi|119383366|ref|YP_914422.1| queuosine biosynthesis protein [Paracoccus denitrificans PD1222]
gi|119373133|gb|ABL68726.1| Queuosine biosynthesis protein [Paracoccus denitrificans PD1222]
Length = 359
Score = 306 bits (784), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 169/361 (46%), Positives = 223/361 (61%), Gaps = 14/361 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP + IA RP PR SARL++ + I D V DL L S D +V
Sbjct: 9 MKLDDFDFHLPETLIATRPARPRSSARLLLAQGD-----SIRDLHVRDLADLLGSGDLLV 63
Query: 61 FNNTKVITAQLNGVRFCHINRREK--EISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+LNG R + E ++ TL V+ + W A+P + +K G+++ F
Sbjct: 64 LNDTKVIPARLNGTRARQTPQGEAVAKVEVTLLEPVA-HGWKALAKPLRKLKPGEVIRFG 122
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
S L A V + GE+ L F +G + ++ VG +PLPPYIA R D D
Sbjct: 123 SA-----LSAEVAEIAG-GELTLRFDATGEAFDAALAQVGAMPLPPYIAALRAPDEADRQ 176
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LL L + G++ VTLHVGAGTF+PVKVED H
Sbjct: 177 DYQTVWARNSGAVAAPTASLHFDGELLDGLAARGVRFTHVTLHVGAGTFLPVKVEDVTTH 236
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH E G + A A+N+ ++ GGR++ VGTT+LRL+E+A EDG ++P+ G T IFI
Sbjct: 237 KMHGEWGEVTPEAAAAINATRAAGGRVIPVGTTALRLIESAAAEDGTVHPFQGVTEIFIY 296
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGYRFR D LM+NFHLPKSTLLMLVSA G + + +Y+HA+ YRF+SYGD SLL
Sbjct: 297 PGYRFRVTDALMTNFHLPKSTLLMLVSALMGQDRIRGIYRHAVESGYRFFSYGDASLLIP 356
Query: 359 K 359
K
Sbjct: 357 K 357
>gi|260575224|ref|ZP_05843224.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Rhodobacter
sp. SW2]
gi|259022484|gb|EEW25780.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Rhodobacter
sp. SW2]
Length = 345
Score = 306 bits (783), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 165/356 (46%), Positives = 218/356 (61%), Gaps = 13/356 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP + IA RP PR +ARL++ + ISD VSDL D +V
Sbjct: 1 MKLSDFDFDLPEALIATRPARPRTAARLLLAEGD-----AISDRQVSDLVDIFRPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G R + TL + W A+P + + G+++ F
Sbjct: 56 LNNTRVIPARLTGTRAR--GNAVARVEVTLLEPAADGGWRALAKPLRKLALGEVVRF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
ATV K T ++ LVF + G + ++ G +PLPPYIA KR DA+D VDY
Sbjct: 111 --SDHFSATVAGKSET-DLRLVFDLEGAAFDAALAEAGAMPLPPYIAAKRAPDAQDRVDY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTA LHF + LL+ L + G+ VTLHVGAGTF+PVKVED H M
Sbjct: 168 QTVFARHSGAVAAPTASLHFDAALLAALAAKGVDFTEVTLHVGAGTFLPVKVEDVTTHRM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G + A +N+ + GGR++ VGTT+LRL+E+A DG++ W+G T+IFI PG
Sbjct: 228 HAEWGEVTTVAAAQINATHAAGGRVIPVGTTALRLIESAAAADGLVRAWAGTTDIFIYPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRFR D LM+NFHLPKSTLLMLVSA G ++YQHA+ YRF+SYGD SLL
Sbjct: 288 YRFRVADALMTNFHLPKSTLLMLVSALMGQGRITRIYQHAVVQRYRFFSYGDASLL 343
>gi|114764580|ref|ZP_01443784.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pelagibaca
bermudensis HTCC2601]
gi|114542956|gb|EAU45976.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseovarius
sp. HTCC2601]
Length = 349
Score = 306 bits (783), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 166/358 (46%), Positives = 223/358 (62%), Gaps = 13/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RP PR SARL+V + I+D +V DL +L D +V
Sbjct: 1 MHLSDFDFDLPDELIATRPANPRSSARLLVAEGD-----TITDAVVRDLTQWLRPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINR--REKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+L+G R + + +I TL W+ +P K +++G+ + F
Sbjct: 56 LNDTKVIPARLSGARTRESAQGVTQAQIEITLLEPRPGGLWAALVKPLKKLREGETV-VF 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
S+ + LEA G+ LL F++ G + + ++ G +PLPPYIA KR DA+D
Sbjct: 115 SEALSATLEAR-----EDGQGLLRFNLEGEDFDAALAEAGAMPLPPYIAAKRAADAQDKT 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF + LL+ L + G+ VTLHVGAGTF+PVKV+D H
Sbjct: 170 DYQTVWAERTGAVAAPTASLHFDAGLLAALEAHGVAFTKVTLHVGAGTFLPVKVDDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH E G + A + + K+ GGR++ VGTT+LRLLETA + G I W G T+IFI
Sbjct: 230 KMHGEWGEVSESAAAEIAATKAAGGRVIPVGTTALRLLETAARDSGAIAAWQGVTDIFIY 289
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PG+ FR D LM+NFHLPKSTL+MLVSA G E +Y+HAIS YRF+SYGD+SLL
Sbjct: 290 PGFAFRVTDALMTNFHLPKSTLMMLVSALMGRERMMGIYEHAISERYRFFSYGDSSLL 347
>gi|329850831|ref|ZP_08265676.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Asticcacaulis biprosthecum C19]
gi|328841146|gb|EGF90717.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Asticcacaulis biprosthecum C19]
Length = 356
Score = 305 bits (781), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 167/345 (48%), Positives = 219/345 (63%), Gaps = 15/345 (4%)
Query: 15 IALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGV 74
IALRP PR+SARL+ + ++D V D+ AFL S D +V N+TKV+ AQL+G+
Sbjct: 15 IALRPAEPRESARLLRIDAQGG----LTDARVGDIAAFLKSGDLLVVNDTKVLPAQLHGI 70
Query: 75 RFCHINRREKE---ISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVI 131
R RR+ I TL W + +P + ++ GD LHF S +L+ATV
Sbjct: 71 R-----RRDGADVAIEATLIKATGATQWQAFLKPGRKVRIGDDLHFGSD---IKLQATVA 122
Query: 132 DKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSV 191
K G L F + L ++ ++G +PLPPYI KR D +D DYQT +A +GSV
Sbjct: 123 AKAEDGRYTLDFHHTPEVLVERLHVIGAMPLPPYIRSKRREDDQDKRDYQTVFANEEGSV 182
Query: 192 AAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPT 251
AAPTAGLHFTS LL L S G+ + +TLHVGAGTF+P+KVEDT DHIMH+E+G I A +
Sbjct: 183 AAPTAGLHFTSQLLEVLQSQGVGIERITLHVGAGTFLPMKVEDTRDHIMHAELGVISAES 242
Query: 252 AQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMS 311
A +N+ + GGRIV VGTTSLRLLE+A G I+ ++ T IFITPG R+ D++++
Sbjct: 243 AARINAARIAGGRIVCVGTTSLRLLESACDPQGTIHAFASETAIFITPGVVVRSCDLVLT 302
Query: 312 NFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
NFHLPKSTL MLVSA G + K Y+HAI YRF+SYGD L+
Sbjct: 303 NFHLPKSTLFMLVSALAGTDTMKAAYRHAIETGYRFFSYGDACLI 347
>gi|254487456|ref|ZP_05100661.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseobacter
sp. GAI101]
gi|214044325|gb|EEB84963.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseobacter
sp. GAI101]
Length = 358
Score = 305 bits (780), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 172/358 (48%), Positives = 226/358 (63%), Gaps = 14/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FDFDLP + IA RP PR SARL+V P V+ D +V+DLP +L + D +V
Sbjct: 5 LKLSDFDFDLPEALIATRPAVPRTSARLLVA----DGP-VLHDKVVTDLPDWLRAGDRLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRR--EKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L G R + + I TL S +W+ +P K +K G+ + F
Sbjct: 60 LNDTRVIPARLTGARHRDSAQGPVQARIEITLLEPRSDGTWAALIKPLKKLKVGEDV-VF 118
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
S D L AT+I + G+ L F+ +G + + ++ G +PLPPYIA KRP DA+D
Sbjct: 119 SPD----LRATLIGTAD-GQGHLQFNCAGDDFDAALNAAGAMPLPPYIAAKRPADAQDLT 173
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LL L G+ VTLHVGAGTF+PVKV+D DH
Sbjct: 174 DYQTVFARNLGAVAAPTASLHFDDALLQTLADKGVTFSHVTLHVGAGTFLPVKVDDIADH 233
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE G + A A + + K+ GGR++ VGTT+LRL+ETA G I W G T+IFIT
Sbjct: 234 KMHSEWGKVSAQAAAEIAATKAAGGRVIPVGTTALRLVETA-ARGGTIKAWEGDTDIFIT 292
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PG+ F D LM+NFHLPKSTL+MLV+A G E K +Y HAIS YRF+SYGD SLL
Sbjct: 293 PGFTFNVADALMTNFHLPKSTLMMLVAALMGQEAIKTLYAHAISSNYRFFSYGDASLL 350
>gi|254437697|ref|ZP_05051191.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Octadecabacter antarcticus 307]
gi|198253143|gb|EDY77457.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Octadecabacter antarcticus 307]
Length = 350
Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 163/361 (45%), Positives = 230/361 (63%), Gaps = 14/361 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP S IA+RP PR SA+L+V + + D V+DL + L + D +V
Sbjct: 1 MKLSDFDFDLPDSLIAVRPARPRSSAKLLVAGGDGT-----RDLRVTDLVSVLRAGDHLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRRE--KEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+L G R +I TL + +W+ +P + ++ G+ + F
Sbjct: 56 LNDTKVIPARLVGERMRKSTDGAGLAKIEVTLLEPQADGTWAALIKPLRKVRDGERV-VF 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
S D L A ++ +++ G L F+++G + + ++ G +PLPPYIA KRP D D
Sbjct: 115 SDD----LSAVLVHRFD-GMGYLDFNVTGDDFDAALNAAGAMPLPPYIAAKRPADDLDKE 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A G+VAAPTA LHF LL L ++G+K +VTLHVGAGTF+PVKV+D DH
Sbjct: 170 DYQTVWAARSGAVAAPTASLHFEQWLLDDLAAMGVKFSYVTLHVGAGTFLPVKVDDVADH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
+MHSE G + A +A + + K+ GGR++ VGTT+ RL+ETA G + W G T+IFIT
Sbjct: 230 VMHSEWGQVSALSASDIMATKAAGGRVIPVGTTACRLIETAGAS-GTLAAWEGETDIFIT 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ F+ D LM+NFHLPKSTL+MLVSA G + K +Y HAI++ YRF+SYGD+S+L
Sbjct: 289 PGFEFQITDGLMTNFHLPKSTLMMLVSALMGSQRIKDIYAHAIANEYRFFSYGDSSILLP 348
Query: 359 K 359
K
Sbjct: 349 K 349
>gi|89054208|ref|YP_509659.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Jannaschia
sp. CCS1]
gi|122498901|sp|Q28RM8|QUEA_JANSC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|88863757|gb|ABD54634.1| Queuosine biosynthesis protein [Jannaschia sp. CCS1]
Length = 355
Score = 304 bits (778), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 165/345 (47%), Positives = 221/345 (64%), Gaps = 15/345 (4%)
Query: 15 IALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGV 74
IA RP PR SARL+V + L V+DLP+ L D +V N+T+VI A+L G
Sbjct: 15 IATRPARPRSSARLLVADGPETHDLT-----VADLPSMLRRGDRLVLNDTRVIPARLTGT 69
Query: 75 RFCHINRRE--KEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVID 132
R + E I TL + +WS A+P + +K G+ + FS Q+ + A +D
Sbjct: 70 RTRMSAQGEVTARIEVTLMEPQADGTWSALAKPMRKLKAGEKI-IFSNALQADVHA--MD 126
Query: 133 KWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVA 192
+ + L F++ G + + ++ G +PLPPYIA KR DARDY DYQT +AK G+VA
Sbjct: 127 E----GLRLAFNVEGDDFDAALNAAGAMPLPPYIAGKRAPDARDYHDYQTIWAKRAGAVA 182
Query: 193 APTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTA 252
APTA LHF +L+ L S G+ V FVTLHVGAGTF+PV V+D H MH+E G + A A
Sbjct: 183 APTASLHFDEHLMDALTSRGVDVTFVTLHVGAGTFLPVTVDDVTTHKMHAEWGEVRATAA 242
Query: 253 QALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSN 312
+N+ K+ GGRI+ VGTT+LRL+E+A +DG I+P+ G T+IFI PGYR++ D LM+N
Sbjct: 243 AEINATKAAGGRIIPVGTTALRLIESA-AQDGTIHPFEGTTDIFIYPGYRWQITDALMTN 301
Query: 313 FHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
FHLPKSTLLMLVSA G + +Y HAI++ YRF+SYGD SLLF
Sbjct: 302 FHLPKSTLLMLVSALMGKDRMDAVYAHAIANQYRFFSYGDASLLF 346
>gi|84515554|ref|ZP_01002916.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Loktanella
vestfoldensis SKA53]
gi|84510837|gb|EAQ07292.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Loktanella
vestfoldensis SKA53]
Length = 351
Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 169/362 (46%), Positives = 232/362 (64%), Gaps = 14/362 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP + IA RP PR SARL++ + I+D +V+DL L D +V
Sbjct: 1 MKLSDFDFDLPEALIATRPARPRSSARLLLAQGDR-----IADQIVTDLVDILQPGDRLV 55
Query: 61 FNNTKVITAQLNGVRF--CHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+LNG R I TL + SWS +P K ++ G+++ F
Sbjct: 56 LNDTKVIPARLNGTRARSGEAGDTSARIEVTLLEPRADGSWSALVKPLKKLRDGEVV-VF 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
S D L AT+ + + G+ L F+++G + + ++ VG +PLPPYIA KR DA D
Sbjct: 115 SAD----LSATMTGRGD-GQAYLQFNLTGDDFDAALNAVGAMPLPPYIAAKRAADAADMD 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +AK G+VAAPTA LHF LL L + G+ + +VTLHVGAGTF+PVKV+D +H
Sbjct: 170 DYQTYWAKHAGAVAAPTASLHFDGPLLQALAARGVTMSYVTLHVGAGTFLPVKVDDVSEH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A A +N+ K+ G R++ VGTT+LRL+E+A + G + PW+G T+IFIT
Sbjct: 230 KMHAEWGEVTATAAAQINATKAAGKRVIPVGTTALRLIESA-AKGGQLQPWTGPTDIFIT 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ F+ D LM+NFHLPKSTL+MLVSA G++ K +Y HAI+ YRF+SYGD SLL
Sbjct: 289 PGFTFQIADGLMTNFHLPKSTLMMLVSALMGMDRIKAIYAHAIAERYRFFSYGDASLLLP 348
Query: 359 KR 360
R
Sbjct: 349 DR 350
>gi|296536218|ref|ZP_06898336.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseomonas
cervicalis ATCC 49957]
gi|296263440|gb|EFH09947.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseomonas
cervicalis ATCC 49957]
Length = 360
Score = 302 bits (774), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 154/359 (42%), Positives = 218/359 (60%), Gaps = 14/359 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++FDF LP + IA P PRD+ARL+V + P + D V DLPA+L D +V
Sbjct: 12 LRAEDFDFALPEALIAQAPARPRDAARLLV-----AAPEGLRDQGVRDLPAWLRPGDLMV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L R E + L+ S W R +K ++ GDIL
Sbjct: 67 VNDTRVIPARLRA------RRGEARLEIMLNRAESGGMWHALVRNAKKLRPGDILTI--- 117
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+G L V+++ G L+ F +L + G IPLPPYIAR D DY
Sbjct: 118 EGAPELAPRVVERQEGGAALIDFGPDQGKLAAALEKAGEIPLPPYIARPDGPRPEDREDY 177
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
Q +A+ G+VAAPTA LHFT LL+ L G+ +TLHVGAGTF+P++ ++ +H +
Sbjct: 178 QPIFAREPGAVAAPTASLHFTPGLLAALAERGVGQVSLTLHVGAGTFLPIRGDNPREHKL 237
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G I A ++N ++RGGRIV++GTT+LRLLE+A E G+++P+ G T+IF+ PG
Sbjct: 238 HAEWGHISEAAAASINETRARGGRIVAIGTTALRLLESAVDERGVVHPFRGLTDIFLLPG 297
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
+ FR+ D+L++NFHLPKS+L MLVSAF G + Y HA++ YRFYSYGD SLLF++
Sbjct: 298 HVFRSADLLLTNFHLPKSSLFMLVSAFAGQARMRDAYAHAVAQGYRFYSYGDASLLFRE 356
>gi|163736612|ref|ZP_02144031.1| Queuosine biosynthesis protein [Phaeobacter gallaeciensis BS107]
gi|161390482|gb|EDQ14832.1| Queuosine biosynthesis protein [Phaeobacter gallaeciensis BS107]
Length = 356
Score = 302 bits (774), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 165/358 (46%), Positives = 228/358 (63%), Gaps = 14/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP RIA RP PR SARL+V + I D V++L +L S D +V
Sbjct: 1 MKLSDFDFDLPDDRIATRPAVPRSSARLLVAEGDR-----IRDARVANLGQWLRSGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINR--REKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+L+G+R + ++ TL + SW+ +P K +K G+ + F
Sbjct: 56 LNDTKVIPARLSGLRHRDTAQGPMAAKVEVTLLDPGADGSWAALLKPLKKVKLGEEIIF- 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
L AT +++ G+ L F++SG + + ++ G +PLPPYIA KRP D +D
Sbjct: 115 ----SDTLSAT-LERIEDGQGHLKFNLSGTDFDAALAEAGAMPLPPYIAAKRPADEQDKT 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LL+ L + G+++ +VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVWARNSGAVAAPTASLHFDDALLAELQAKGVEISYVTLHVGAGTFLPVKVEDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A A + + K+ GGR++ VGTT+LRL+E+A + G I PW G T+IFI
Sbjct: 230 RMHAEWGRVSAEAATEIAATKAAGGRVIPVGTTALRLIESA-GQSGAIQPWEGDTDIFIY 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PG+ F D LM+NFHLPKSTLLMLVSA G + + +Y HA++ YRF+SYGD SLL
Sbjct: 289 PGFTFHVADALMTNFHLPKSTLLMLVSALMGQDRIRAIYDHALAEEYRFFSYGDASLL 346
>gi|84503044|ref|ZP_01001140.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Oceanicola
batsensis HTCC2597]
gi|84388588|gb|EAQ01460.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Oceanicola
batsensis HTCC2597]
Length = 348
Score = 302 bits (773), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 165/358 (46%), Positives = 226/358 (63%), Gaps = 14/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RP PR SARL+V + I D +V DL +L D +V
Sbjct: 1 MKLSDFDFDLPEGLIATRPARPRSSARLLVAEGD-----AIHDAVVRDLTDWLRPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINR--REKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L G R ++ E I TL + W+ +P K +++G+++ F
Sbjct: 56 LNDTRVIPARLAGKRARDSDQGPTEARIDVTLLEPRASGHWAALIKPLKKVREGEVIRF- 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
S D +RL + G+ LL F++ G + +R ++ G +PLPPYIA RP D RD
Sbjct: 115 SDDLSARLTGR-----DEGQGLLEFNLKGEDFDRALAEAGAMPLPPYIAAMRPPDDRDKD 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF + LL R+ +G+++ VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVWARRSGAVAAPTASLHFDAPLLDRIAGMGVEMTHVTLHVGAGTFLPVKVEDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A A + + ++ GGRI+ VGTT+LRL+E+A G I PW G T+IFI
Sbjct: 230 RMHAEWGEVTAQAADEIAATRAGGGRIIPVGTTALRLIESA-ARSGQIGPWRGETDIFIY 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PG+ FR D LM+NFHLP+STL+MLVSA G E + +Y HA++ YRF+SYGD SLL
Sbjct: 289 PGFEFRVTDALMTNFHLPRSTLMMLVSALMGQERIRSVYDHAVARKYRFFSYGDASLL 346
>gi|330991057|ref|ZP_08315011.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Gluconacetobacter sp. SXCC-1]
gi|329761878|gb|EGG78368.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Gluconacetobacter sp. SXCC-1]
Length = 397
Score = 301 bits (772), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 169/358 (47%), Positives = 224/358 (62%), Gaps = 14/358 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+V +FDF LPP RIA P PRDSARL+ V ++ P I D V DLP L + D +V
Sbjct: 49 LVSDFDFTLPPDRIADHPARPRDSARLLDV--PVAGP--IMDRHVRDLPGCLRAGDILVA 104
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T VI AQL+ R I TL + SW V AR ++ + GD L F
Sbjct: 105 NDTAVIPAQLSATRGA------ARIGITLDRILPDGSWHVLARNARRLHPGDTLAF---- 154
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G S + A V+ + G++ L FS+ G ++ + G + LPPYIAR +D DY
Sbjct: 155 GASPVTADVLACGDAGDVTLRFSVEGAAFDQFLHDTGHLALPPYIARPEGPTEQDRKDYA 214
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A+ +G+VAAPTAGLHFT +LL+ L G+ +TLHVGAGTF+P++ E H MH
Sbjct: 215 TIFAQHRGAVAAPTAGLHFTPDLLAALDHAGVLRQTLTLHVGAGTFLPMRSEQISAHRMH 274
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
+E G I A+ +N+ ++ GGRI++VGTTSLRLLE+AT EDG+++P+ G T IFI PGY
Sbjct: 275 AERGTITPHAARRINAARAAGGRIIAVGTTSLRLLESATDEDGVVHPFHGETAIFIKPGY 334
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
RFRAVD+L++NFHLP+STL MLV AF G + Y HAI+ YRFYSYGD LL +
Sbjct: 335 RFRAVDMLLTNFHLPRSTLFMLVCAFGGYRRMQAAYAHAIAKGYRFYSYGDACLLHRS 392
>gi|86138785|ref|ZP_01057357.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseobacter
sp. MED193]
gi|85824432|gb|EAQ44635.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseobacter
sp. MED193]
Length = 356
Score = 301 bits (772), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 163/362 (45%), Positives = 227/362 (62%), Gaps = 14/362 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP + IA RP PR SARL+V P+ ++D + DL L D +V
Sbjct: 1 MKLSDFDFDLPDALIATRPATPRSSARLLVATPD-----QMTDGHIGDLVDLLQPGDRLV 55
Query: 61 FNNTKVITAQLNGVRF--CHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+L+G+R R +I TL + SWS +P K +K G+ + F
Sbjct: 56 LNDTKVIPARLSGLRHRDTAQGRMAAKIEVTLLDPKADGSWSALLKPLKKVKIGETVAF- 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
L A ++ G+ LL F++ G + + ++ G +PLPPYIA KR D +D
Sbjct: 115 ----SDALTAELVGV-TEGQGLLRFNLVGDDFDAALNAAGAMPLPPYIAAKRAADDQDKE 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF +LL+ L + G++ +VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVWARHSGAVAAPTASLHFDQDLLAVLKAKGVQFTYVTLHVGAGTFLPVKVEDVTSH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A A + + K+ GGR++ VGTT+LRL+E+A G + PW G T+IFI
Sbjct: 230 KMHAEWGRVSAEAAAEIAATKAAGGRVIPVGTTALRLIESA-ARGGTVQPWEGETDIFIY 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ F A D LM+NFHLPKSTLLML+SA G + +++Y+HA++ YRF+SYGD SLL
Sbjct: 289 PGFVFHAADALMTNFHLPKSTLLMLISALMGQDRVREIYEHAVNSRYRFFSYGDGSLLLP 348
Query: 359 KR 360
+
Sbjct: 349 QE 350
>gi|146277887|ref|YP_001168046.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhodobacter
sphaeroides ATCC 17025]
gi|166216745|sp|A4WTM7|QUEA_RHOS5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|145556128|gb|ABP70741.1| Queuosine biosynthesis protein [Rhodobacter sphaeroides ATCC 17025]
Length = 346
Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 166/358 (46%), Positives = 218/358 (60%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RP PR +ARL++ + I D V DL + D +V
Sbjct: 1 MKLSDFDFDLPERLIATRPARPRTAARLLLAEGDR-----IEDRHVRDLVGIFHPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREK--EISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
NNT+VI A+L G R R E +I TL + W A+P + +K+G+ + F
Sbjct: 56 LNNTRVIPARLVGTR----TRGEACAKIEITLMEPAAAGGWRALAKPLRKLKEGETIRF- 110
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
L A V +K T ++ LVF +G + + ++ G +PLPPYIA +R DA+D
Sbjct: 111 ----SDALSAEVAEKGET-DLRLVFDRAGEDFDAALAEAGAMPLPPYIAARRAPDAQDRE 165
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LL L + G+ VTLHVGAGTF+PVKVED H
Sbjct: 166 DYQTVFARHAGAVAAPTASLHFDRPLLEALAANGVAFTEVTLHVGAGTFLPVKVEDVTTH 225
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A + + K+ GGR++ VGTT+LRL+E+A+ G I PW G T+IFI
Sbjct: 226 RMHAEWGEVTEAAAAEIAATKAAGGRVIPVGTTALRLIESASAA-GTIRPWRGETDIFIY 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGYRFR D LM+NFHLPKSTLLMLVSA G + +Y HA+ H YRF+SYGD SLL
Sbjct: 285 PGYRFRVTDALMTNFHLPKSTLLMLVSALMGEARIRAIYDHAVRHDYRFFSYGDASLL 342
>gi|126728575|ref|ZP_01744390.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Sagittula
stellata E-37]
gi|126710505|gb|EBA09556.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Sagittula
stellata E-37]
Length = 354
Score = 299 bits (765), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 164/358 (45%), Positives = 230/358 (64%), Gaps = 14/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF+LP IA RP PR +ARL+V VISD V++LP +L D +V
Sbjct: 1 MKLSDFDFELPERLIATRPARPRTAARLLVCDGG-----VISDATVAELPDWLRPGDRLV 55
Query: 61 FNNTKVITAQLNGVR--FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L+GVR E +I TL + WS +P K ++ G+I+ F
Sbjct: 56 LNDTQVIPARLSGVRRRVGEAGETEAQIEVTLLEPRADGCWSALLKPLKKVRDGEIVRF- 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
S D LEA ++ + + G+ +L F+++ + + ++ G +PLPPYIA +RP DA+D
Sbjct: 115 SDD----LEAMLMSRQD-GQAILRFNLAAADFDAALNAAGAMPLPPYIAARRPADAQDKE 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ +G+VAAPTA LHF +LL R+ +G+ VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVWARNRGAVAAPTASLHFDESLLKRIADMGVAFTHVTLHVGAGTFLPVKVEDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH E G + A + + ++ GGR++ VGTT+LRL+E+A E G I P+ G T+IFI
Sbjct: 230 RMHGEWGEVTPQAAAEIAATRAAGGRVIPVGTTALRLIESAARE-GEIAPFHGVTDIFIY 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PG+ F D LM+NFHLPKSTLLMLVSA G + +++Y HA++ YRF+SYGD SLL
Sbjct: 289 PGFSFNVTDALMTNFHLPKSTLLMLVSALMGQDCIREVYAHAVAEDYRFFSYGDASLL 346
>gi|260433384|ref|ZP_05787355.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Silicibacter lacuscaerulensis ITI-1157]
gi|260417212|gb|EEX10471.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Silicibacter lacuscaerulensis ITI-1157]
Length = 348
Score = 298 bits (764), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 163/360 (45%), Positives = 223/360 (61%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RP PR SARL+V + I+D V +LP +L D +V
Sbjct: 1 MKLSDFDFDLPEDLIATRPANPRTSARLLVAQGD-----DIADDRVFNLPDWLRPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV----SPNSWSVYARPSKVIKKGDILH 116
N+T+VI A+L+G R H N + +S + + + +W+ +P K ++ G+ +
Sbjct: 56 LNDTRVIPARLSGRR--HRNSAQGPVSAAIEATLLDPQADGTWAALLKPLKKVRVGEEI- 112
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
FS D + V+++ G+ L F+++G + +R + G +PLPPYIA KRP D RD
Sbjct: 113 VFSGD-----LSAVLERVAEGQAYLRFNLTGEDFDRALEQAGAMPLPPYIAAKRPADERD 167
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT +A+ G+VAAPTA LHF LL L G++ VTLHVGAGTF+PVKVED
Sbjct: 168 KTDYQTVWARHSGAVAAPTASLHFDEALLKTLTERGVEFTHVTLHVGAGTFLPVKVEDVT 227
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H MH+E G + A + + K+ GGR++ VGTT+LRL+E+A G I PW G T+IF
Sbjct: 228 THKMHAEWGRVSPQAAAEIAATKAAGGRVIPVGTTALRLIESA-ARGGRIEPWEGETDIF 286
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PG+ F D LM+NFHLPKSTLLMLVSA G + ++Y HAI+ YRF+SYGD SLL
Sbjct: 287 IYPGFTFHVTDALMTNFHLPKSTLLMLVSALMGKDRMLRIYDHAIACRYRFFSYGDASLL 346
>gi|294083598|ref|YP_003550355.1| Queuosine biosynthesis protein [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292663170|gb|ADE38271.1| Queuosine biosynthesis protein [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 386
Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 171/368 (46%), Positives = 222/368 (60%), Gaps = 28/368 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLPP RIA P PRDSARL+ +LS I+D V DLP L + D ++
Sbjct: 17 MKLSDFDFDLPPDRIATAPAQPRDSARLL----DLSGA-AIADRHVGDLPDLLRAGDLLI 71
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHM----RVSPNS-WSVYARPSKVIKKGDIL 115
N+T VI A+L G R + IS TLH + N+ W V+A+P+K + DI+
Sbjct: 72 VNDTAVIPARLIG------KRGDARISVTLHKYEGHKNGGNAIWRVFAKPAKKCRPDDII 125
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVF-------SISGIELERQISLVGTIPLPPYIAR 168
F G A V+ + G++ L F ++ L + GT+PLPPYIAR
Sbjct: 126 MFAPDFG-----ARVLGRGEGGDVELAFIDPRSGNALDTDSLNAGLDTYGTMPLPPYIAR 180
Query: 169 KRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFM 228
+ D+ DYQT +A +G+VAAPTAGLHFT L S L + G+ + VTLHVGAGTF+
Sbjct: 181 PDGVLDSDHEDYQTMFASQRGAVAAPTAGLHFTDGLTSALQAKGVAIAAVTLHVGAGTFL 240
Query: 229 PVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINP 288
PV VE +H MHSE G I A A + + K GGR+++VGTTSLR+LE + G I
Sbjct: 241 PVTVETIAEHKMHSEWGAIPADVAAKIIATKQAGGRVIAVGTTSLRILEASFAALGHIGH 300
Query: 289 WSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
++G T+IFITPG+ F VD+LM+NFHLPKSTLLMLVSAF G Y HAI+ YRF+
Sbjct: 301 FAGETDIFITPGFSFNVVDMLMTNFHLPKSTLLMLVSAFAGHAPIMAAYDHAIASGYRFF 360
Query: 349 SYGDTSLL 356
SYGD LL
Sbjct: 361 SYGDACLL 368
>gi|149914724|ref|ZP_01903254.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseobacter
sp. AzwK-3b]
gi|149811517|gb|EDM71352.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseobacter
sp. AzwK-3b]
Length = 350
Score = 296 bits (758), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 168/363 (46%), Positives = 225/363 (61%), Gaps = 23/363 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RP PR SARL+V + I D +V DL FL D +V
Sbjct: 1 MKLSDFDFDLPEDLIATRPARPRSSARLLVAQGD-----AIRDAIVRDLGDFLRPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRRE-------KEISCTLHMRVSPNSWSVYARPSKVIKKGD 113
N+T VI A+L+G+R RRE +I TL WS +P K ++ G+
Sbjct: 56 LNDTAVIPARLSGMR-----RREGPEGVTQAKIEVTLLEPGPEGDWSALVKPLKKVRDGE 110
Query: 114 ILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
++ F + LEA V+ + G+ LL F++ G + ++ G +PLPPYIA +R D
Sbjct: 111 VIVF-----GAGLEAEVLAR-REGQGLLRFNLEGEAFDTALNDAGAMPLPPYIAARRAAD 164
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
A+D DYQT +A+ +G+VAAPTA LHF + LL RL ++G+ VTLHVGAGTF+PVKVE
Sbjct: 165 AQDRTDYQTVWARHKGAVAAPTASLHFDAELLERLEAMGVTFSHVTLHVGAGTFLPVKVE 224
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
D H MH+E G + A + + K+ GGR++ VGTT+LRL+E+A G I PW G T
Sbjct: 225 DVTTHRMHAEWGRVSEAAAAEIAATKAAGGRVIPVGTTALRLIESAAQASGAIAPWEGET 284
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG+ FR D LM+NFHLPKSTL+MLVSA G + K +Y HA+ + YRF+SYGD
Sbjct: 285 DIFIYPGFTFRVADALMTNFHLPKSTLMMLVSALMGQDRIKDIYDHAVENRYRFFSYGDA 344
Query: 354 SLL 356
SLL
Sbjct: 345 SLL 347
>gi|56697089|ref|YP_167452.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ruegeria
pomeroyi DSS-3]
gi|81558479|sp|Q5LRA3|QUEA_SILPO RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|56678826|gb|AAV95492.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ruegeria
pomeroyi DSS-3]
Length = 349
Score = 295 bits (755), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 162/345 (46%), Positives = 217/345 (62%), Gaps = 14/345 (4%)
Query: 15 IALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGV 74
IA RP PR SARL+V + ISD +V DLP +L D +V N+T+VI A+L+G
Sbjct: 15 IATRPAQPRSSARLLVARGD-----AISDAVVRDLPDWLRPGDRLVLNDTRVIPARLSGT 69
Query: 75 RFCHINRR--EKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVID 132
R + I TL + SWS A+P + +++G+ + FS D + +EA
Sbjct: 70 RQRQSAQGPVTARIEITLLEPRADGSWSALAKPLRKLREGETI-IFSNDLSADVEAI--- 125
Query: 133 KWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVA 192
G+ LL F+++G + + ++ G +PLPPYIA KR D +D DYQT +A+ G+VA
Sbjct: 126 --EDGQALLRFNLTGPDFDAALAQAGAMPLPPYIAAKRAADEQDKTDYQTVWARHSGAVA 183
Query: 193 APTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTA 252
APTA LHF LL+ L + G+ VTLHVGAGTF+PVKVED H MH+E G + A A
Sbjct: 184 APTASLHFDDTLLAALAAHGVTFTHVTLHVGAGTFLPVKVEDVTTHKMHAEWGRVSAEAA 243
Query: 253 QALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSN 312
+ + K+ GGR++ VGTT+LRL+E+A G I PW G T+IFI PG+ FR D LM+N
Sbjct: 244 AEIAATKAAGGRVIPVGTTALRLIESA-ARGGQIAPWEGDTDIFIYPGFDFRVADGLMTN 302
Query: 313 FHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
FHLPKSTLLMLVSA G E +K+Y HA+ + YRF+SYGD SLL
Sbjct: 303 FHLPKSTLLMLVSALMGQESIRKIYAHAVENRYRFFSYGDASLLL 347
>gi|77463529|ref|YP_353033.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhodobacter
sphaeroides 2.4.1]
gi|91207401|sp|Q3J252|QUEA_RHOS4 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|77387947|gb|ABA79132.1| S-adenosylmethionine tRNA ribosyltransferase-isomerase [Rhodobacter
sphaeroides 2.4.1]
Length = 346
Score = 295 bits (755), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 164/356 (46%), Positives = 212/356 (59%), Gaps = 14/356 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RP PR +ARL++ + I D V DL D +V
Sbjct: 1 MQLSDFDFDLPERLIATRPARPRTAARLLLAEGDR-----IEDRHVRDLVGIFRPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G R E + TL + W A+P + +K G+ + F
Sbjct: 56 LNNTRVIPARLTGTRTR--GEAEARVEVTLMEPAAAGGWRAMAKPLRKLKPGETIRF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A V +K T ++ LVF +G + ++ G +PLPPYIA +R D +D DY
Sbjct: 111 --SDALSAEVAEKGET-DLRLVFDRAGAAFDAALAEAGAMPLPPYIAARRAPDTQDDEDY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTA LHF LL L + G+ VTLHVGAGTF+PVKVED H M
Sbjct: 168 QTVFARHAGAVAAPTASLHFDRPLLEALAARGVGFTEVTLHVGAGTFLPVKVEDVTTHRM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G + A + + K+ GGR++ VGTT+LRL+E+A G I PW G T+IFI PG
Sbjct: 228 HAEWGEVTETAAAEIAATKAAGGRVIPVGTTALRLIESAAAS-GAIRPWRGETDIFIYPG 286
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRFR D LM+NFHLPKSTLLMLVSA G E + +Y HA+ H YRF+SYGD SLL
Sbjct: 287 YRFRVTDALMTNFHLPKSTLLMLVSALMGQERIRAIYDHAVRHDYRFFSYGDASLL 342
>gi|254509984|ref|ZP_05122051.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodobacteraceae bacterium KLH11]
gi|221533695|gb|EEE36683.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodobacteraceae bacterium KLH11]
Length = 353
Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 165/360 (45%), Positives = 221/360 (61%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA RP PR SARL+V + I D V LP L D +V
Sbjct: 6 MKLSDFDFHLPEHLIATRPASPRSSARLLVAQED-----AIQDRNVFHLPDLLQPGDRLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLH---MRVSPNS-WSVYARPSKVIKKGDILH 116
N+T+VI A+L+G R H + + +S + + P+ W+ +P K +K G+ +
Sbjct: 61 LNDTRVIPARLSGRR--HRDSAQGPVSAAIEATLLEPQPDGCWAALIKPLKKVKPGEEI- 117
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
FS D L AT +D+ + G+ L F+++G + + + G +PLPPYIA KR D +D
Sbjct: 118 VFSDD----LSAT-LDRVSDGQAYLRFNLTGEDFDHALEQAGAMPLPPYIAAKRAADEQD 172
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT +A+ G+VAAPTA LHF LL L + G+ VTLHVGAGTF+PVKVED
Sbjct: 173 KTDYQTVWARNAGAVAAPTASLHFDDTLLRALAARGVAFTHVTLHVGAGTFLPVKVEDVT 232
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H MH+E G + A A + + K+ GGR++ VGTT+LRL+E+A G I PW G T+IF
Sbjct: 233 THKMHAEWGRVSAQAAAEIAATKAAGGRVIPVGTTALRLIESA-ARGGQIAPWEGETDIF 291
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PG+RF D LM+NFHLPKSTLLMLVSA G + + +Y HAI+ YRF+SYGD SLL
Sbjct: 292 IYPGFRFHVTDALMTNFHLPKSTLLMLVSALMGQDRVRTIYDHAIAEEYRFFSYGDASLL 351
>gi|89069964|ref|ZP_01157296.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Oceanicola
granulosus HTCC2516]
gi|89044412|gb|EAR50543.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Oceanicola
granulosus HTCC2516]
Length = 349
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 162/359 (45%), Positives = 225/359 (62%), Gaps = 13/359 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA+RP PR SARL++ + I D +VS+LP L D +V
Sbjct: 1 MQLSDFDFDLPDELIAVRPARPRSSARLLLAEGD-----AIGDRIVSELPRILQPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRRE--KEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L G R E I TL + WS +P + +++G+ + F
Sbjct: 56 LNDTRVIPARLTGTRTRPGAAGEGVARIEVTLLEPRADGLWSALVKPLRKLREGEEVVF- 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
RL A+ ++ G+ LL F+ +G + + ++ G +PLPPYIA +RP DA D
Sbjct: 115 ----SPRLTAS-LEAREAGQGLLRFNCTGEDFDAALAEAGAMPLPPYIAARRPADAADKD 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF + LL + + G+++ VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVWAERPGAVAAPTASLHFDAPLLEAIAARGVEITRVTLHVGAGTFLPVKVEDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A + + + GGR++ VGTT+LRL+ETA G I PW+G T+IFI
Sbjct: 230 RMHAEWGEVTEAAAAEIAATRGAGGRVIPVGTTALRLIETAARASGEIAPWTGETDIFIY 289
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG+ FR D LM+NFHLP+STL+MLVSAF G+E + +Y HA++ YRF+SYGD SLL
Sbjct: 290 PGFEFRVADGLMTNFHLPRSTLMMLVSAFMGMERVRAIYAHAVAERYRFFSYGDASLLL 348
>gi|126462385|ref|YP_001043499.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhodobacter
sphaeroides ATCC 17029]
gi|166216744|sp|A3PK61|QUEA_RHOS1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|126104049|gb|ABN76727.1| Queuosine biosynthesis protein [Rhodobacter sphaeroides ATCC 17029]
Length = 346
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 164/356 (46%), Positives = 212/356 (59%), Gaps = 14/356 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RP PR +ARL++ + I D V DL D +V
Sbjct: 1 MQLSDFDFDLPERLIATRPARPRTAARLLLAEGDR-----IEDRHVRDLVGIFRPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G R E + TL + W A+P + +K G+ + F
Sbjct: 56 LNNTRVIPARLTGTRTR--GEAEARVEVTLMEPAAAGGWRAMAKPLRKLKPGETIRF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A V +K T ++ LVF +G + ++ G +PLPPYIA +R DA+D DY
Sbjct: 111 --SDALSAEVAEKGET-DLRLVFDRAGAAFDAALAEAGAMPLPPYIAARRAPDAQDDEDY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTA LHF LL L + + VTLHVGAGTF+PVKVED H M
Sbjct: 168 QTVFARHAGAVAAPTASLHFDRPLLEALAARSVGFTEVTLHVGAGTFLPVKVEDVTTHRM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G + A + + K+ GGR++ VGTT+LRL+E+A G I PW G T+IFI PG
Sbjct: 228 HAEWGEVTEAAAAEIAATKAAGGRVIPVGTTALRLIESAAAS-GAIRPWRGETDIFIYPG 286
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRFR D LM+NFHLPKSTLLMLVSA G E + +Y HA+ H YRF+SYGD SLL
Sbjct: 287 YRFRVTDALMTNFHLPKSTLLMLVSALMGQERIRAIYDHAVRHDYRFFSYGDASLL 342
>gi|221639392|ref|YP_002525654.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhodobacter
sphaeroides KD131]
gi|254764285|sp|B9KT07|QUEA_RHOSK RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|221160173|gb|ACM01153.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhodobacter
sphaeroides KD131]
Length = 346
Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 166/356 (46%), Positives = 213/356 (59%), Gaps = 14/356 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RP PR +ARL++ + I D V DL D +V
Sbjct: 1 MQLSDFDFDLPERLIATRPARPRTAARLLLAEGDR-----IEDRHVRDLVGIFRPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G R E I TL + W A+P + +K G+ + F
Sbjct: 56 LNNTRVIPARLTGTRTR--GEAEARIEVTLMEPAAAGGWRAMAKPLRKLKPGETIRF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A V +K T ++ LVF +G + ++ G +PLPPYIA +R DA+D DY
Sbjct: 111 --SDALSAEVAEKGET-DLRLVFDRAGAAFDAALADAGAMPLPPYIAARRAPDAQDDEDY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTA LHF LL L + G+ VTLHVGAGTF+PVKVED H M
Sbjct: 168 QTVFARHAGAVAAPTASLHFDRPLLEALAARGVGFTEVTLHVGAGTFLPVKVEDVTTHRM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G + A + + K+ GGR++ VGTT+LRL+E+A G I PW G T+IFI PG
Sbjct: 228 HAEWGEVTEAAAAEIAATKAAGGRVIPVGTTALRLIESAAAS-GAIRPWRGETDIFIYPG 286
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRFR D LM+NFHLPKSTLLMLVSA G E + +Y HA+ H YRF+SYGD SLL
Sbjct: 287 YRFRVTDALMTNFHLPKSTLLMLVSALMGQERIRAIYDHAVRHDYRFFSYGDASLL 342
>gi|313623657|gb|EFR93813.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
innocua FSL J1-023]
Length = 342
Score = 293 bits (750), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 158/353 (44%), Positives = 221/353 (62%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++LN DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKESGE---IKDQHFTDIISYLNKGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G++ + I L + N+W +P+K I+KG + F
Sbjct: 58 LNDTRVLPARLHGIK----DETGAHIEVLLLKQKEGNAWETLVKPAKRIRKGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+AT +++ G +L FS GI E + +G +PLPPYI + R Y
Sbjct: 111 -GDGALKATCLEELEHGGRILEFSYEGIFYE-VLEQLGEMPLPPYIKEQLADQDR----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLAQISAKGVEIIFVTLHVGLGTFRPVDVEDTQNHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + +A +N +KS GG++V+VGTTS+R LET A+ DG + SG+T+IFI+P
Sbjct: 225 HSEFYRLTEESADRINKIKSAGGKVVAVGTTSIRTLETIASRHDGKLIAESGWTDIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY+F+AVD L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD
Sbjct: 285 GYKFQAVDALITNFHLPKSTLIMLVSALSDRTKILAAYNHAVEQQYRFFSFGD 337
>gi|290893933|ref|ZP_06556909.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL J2-071]
gi|290556471|gb|EFD90009.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL J2-071]
Length = 342
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 157/353 (44%), Positives = 222/353 (62%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++LN DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKESGD---IKDQHFTDIISYLNEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G++ + I L + N+W +P+K I+KG + F
Sbjct: 58 LNDTRVLPARLHGIK----DETGAHIEVLLLKQKEGNAWETLVKPAKRIRKGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+AT +++ G +L FS GI E + +G +PLPPYI + R Y
Sbjct: 111 -GDGALKATCLEELEHGGRILEFSYEGIFYE-VLEQLGEMPLPPYIKEQLADQDR----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEDLLAKISAKGVEIIFVTLHVGLGTFRPVDVEDTANHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + +A+ +N +K++GG++V+VGTTS+R LET A+ DG + SG+T IFI+P
Sbjct: 225 HSEFYRLTEESAERINKIKAQGGKVVAVGTTSIRTLETIASRHDGKLVAESGWTEIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+AVD L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD
Sbjct: 285 GYTFQAVDALITNFHLPKSTLIMLVSALSDRTKILAAYNHAVEQQYRFFSFGD 337
>gi|16800634|ref|NP_470902.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
innocua Clip11262]
gi|21263888|sp|Q92BI3|QUEA_LISIN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|16414053|emb|CAC96797.1| lin1566 [Listeria innocua Clip11262]
gi|313618792|gb|EFR90688.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
innocua FSL S4-378]
Length = 342
Score = 292 bits (748), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 158/353 (44%), Positives = 220/353 (62%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++LN DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKESGE---IKDQHFTDIISYLNKGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G++ + I L + N+W +P+K I+KG + F
Sbjct: 58 LNDTRVLPARLHGIK----DETGAHIEVLLLKQKEGNAWETLVKPAKRIRKGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+AT +++ G +L FS GI E + +G +PLPPYI + R Y
Sbjct: 111 -GDGALKATCLEELEHGGRILEFSYEGIFYEV-LEQLGEMPLPPYIKEQLADQDR----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLAQISAKGVEIIFVTLHVGLGTFRPVDVEDTQNHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + +A +N +KS GG++V+VGTTS+R LET A+ DG + SG+T+IFI+P
Sbjct: 225 HSEFYRLTEESADRINKIKSAGGKVVAVGTTSIRTLETIASRHDGKLIAESGWTDIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+AVD L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD
Sbjct: 285 GYEFQAVDALITNFHLPKSTLIMLVSALSDRTKILAAYNHAVEQQYRFFSFGD 337
>gi|260427502|ref|ZP_05781481.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Citreicella
sp. SE45]
gi|260421994|gb|EEX15245.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Citreicella
sp. SE45]
Length = 349
Score = 292 bits (748), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 164/358 (45%), Positives = 225/358 (62%), Gaps = 13/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP + IA RP PR SARL+V + ++D +V DL +L D +V
Sbjct: 1 MKLSDFDFDLPEALIATRPANPRSSARLLVADGD-----TLTDAVVRDLTQWLRPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINR--REKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+L+G R + +I TL + W+ +P K +++G+ + F
Sbjct: 56 LNDTKVIPARLSGTRERDGAQGLTRAQIEVTLLEPRADGCWAALVKPLKKLREGETVVF- 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
S + V++ + G+ LL F++ G + + ++ G +PLPPYIA +R DA+D
Sbjct: 115 -----SDALSAVLESRDEGQGLLRFNLVGEDFDAALAEAGAMPLPPYIAARRAADAQDKQ 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ +G+VAAPTA LHF LL L + G+ VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVWAERKGAVAAPTASLHFDEPLLESLRAHGVAFTKVTLHVGAGTFLPVKVEDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH E G + A + + K+ GGR++ VGTT+LRLLETA + G I PW G T+IFI
Sbjct: 230 RMHGEWGEVSDSAAAEIAATKAAGGRVIPVGTTALRLLETAARDTGAIAPWQGVTDIFIY 289
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PG+ FR D LM+NFHLPKSTL+MLVSA G E K++Y HAI+ YRF+SYGD+SLL
Sbjct: 290 PGFTFRVTDALMTNFHLPKSTLMMLVSALMGQERMKRIYDHAITERYRFFSYGDSSLL 347
>gi|16803571|ref|NP_465056.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes EGD-e]
gi|47097028|ref|ZP_00234601.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes str. 1/2a F6854]
gi|224499808|ref|ZP_03668157.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes Finland 1988]
gi|224501529|ref|ZP_03669836.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL R2-561]
gi|254828235|ref|ZP_05232922.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL N3-165]
gi|254829710|ref|ZP_05234365.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes 10403S]
gi|254898303|ref|ZP_05258227.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes J0161]
gi|254912205|ref|ZP_05262217.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes J2818]
gi|254936533|ref|ZP_05268230.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes F6900]
gi|21263872|sp|Q8Y6Z9|QUEA_LISMO RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|16410960|emb|CAC99609.1| lmo1531 [Listeria monocytogenes EGD-e]
gi|47014610|gb|EAL05570.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes str. 1/2a F6854]
gi|258600623|gb|EEW13948.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL N3-165]
gi|258609127|gb|EEW21735.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes F6900]
gi|293590178|gb|EFF98512.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes J2818]
Length = 342
Score = 292 bits (747), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 157/353 (44%), Positives = 221/353 (62%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++LN DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKESGD---IKDQHFTDIISYLNEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G++ + I L + N+W +P+K I+KG + F
Sbjct: 58 LNDTRVLPARLHGIK----DETGAHIEVLLLKQKEGNAWETLVKPAKRIRKGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+AT +++ G +L FS GI E + +G +PLPPYI + R Y
Sbjct: 111 -GDGALKATCLEELEHGGRILEFSYEGIFYE-VLEQLGEMPLPPYIKEQLADQDR----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL ++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEDLLEQISAKGVEIIFVTLHVGLGTFRPVDVEDTTNHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + +A+ +N +K++GG++V+VGTTS+R LET A+ DG + SG+T IFI+P
Sbjct: 225 HSEFYRLTEESAERINKIKAQGGKVVAVGTTSIRTLETIASRHDGKLVAESGWTEIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+AVD L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD
Sbjct: 285 GYTFQAVDALITNFHLPKSTLIMLVSALSDRTKILAAYNHAVEEQYRFFSFGD 337
>gi|284801921|ref|YP_003413786.1| hypothetical protein LM5578_1676 [Listeria monocytogenes 08-5578]
gi|284995063|ref|YP_003416831.1| hypothetical protein LM5923_1628 [Listeria monocytogenes 08-5923]
gi|284057483|gb|ADB68424.1| hypothetical protein LM5578_1676 [Listeria monocytogenes 08-5578]
gi|284060530|gb|ADB71469.1| hypothetical protein LM5923_1628 [Listeria monocytogenes 08-5923]
Length = 342
Score = 291 bits (746), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 157/353 (44%), Positives = 221/353 (62%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++LN DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKESGD---IKDQHFTDIISYLNEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G++ + I L + N+W +P+K I+KG + F
Sbjct: 58 LNDTRVLPARLHGIK----DETGAHIEVLLLKQKEGNAWETLVKPAKRIRKGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+AT +++ G +L FS GI E + +G +PLPPYI + R Y
Sbjct: 111 -GDGALKATCLEELEHGGRILEFSYEGIFYE-VLEQLGEMPLPPYIKEQLADQDR----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL ++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEDLLEQISAKGVEIIFVTLHVGLGTFRPVDVEDTTNHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + +A+ +N +K++GG++V+VGTTS+R LET A+ DG + SG+T IFI+P
Sbjct: 225 HSEFYRLTEESAERINKIKAQGGKVVAVGTTSIRTLETIASRHDGKLVAESGWTEIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+AVD L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD
Sbjct: 285 GYTFQAVDALITNFHLPKSTLIMLVSALSDRTKILAAYNHAVGEQYRFFSFGD 337
>gi|217964322|ref|YP_002350000.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes HCC23]
gi|254764281|sp|B8DHL7|QUEA_LISMH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|217333592|gb|ACK39386.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes HCC23]
gi|307571112|emb|CAR84291.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes L99]
Length = 342
Score = 291 bits (746), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 157/353 (44%), Positives = 221/353 (62%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++LN DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKESGD---IKDQHFTDIISYLNEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G++ + I L + N+W +P+K I+KG + F
Sbjct: 58 LNDTRVLPARLHGIK----DETGAHIEVLLLKQKEGNAWETLVKPAKRIRKGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+AT +++ G +L FS GI E + +G +PLPPYI + R Y
Sbjct: 111 -GDGALKATCLEELEHGGRILEFSYEGIFYE-VLEQLGEMPLPPYIKEQLADQDR----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEDLLAKISAKGVEIIFVTLHVGLGTFRPVDVEDTANHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + +A+ +N +K +GG++V+VGTTS+R LET A+ DG + SG+T IFI+P
Sbjct: 225 HSEFYRLTEESAERINKIKVQGGKVVAVGTTSIRTLETIASRHDGKLVAESGWTEIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+AVD L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD
Sbjct: 285 GYTFQAVDALITNFHLPKSTLIMLVSALSDRTKILAAYNHAVEQQYRFFSFGD 337
>gi|315282447|ref|ZP_07870859.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
marthii FSL S4-120]
gi|313613910|gb|EFR87642.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
marthii FSL S4-120]
Length = 342
Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 156/353 (44%), Positives = 221/353 (62%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++LN DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKESGE---IKDQHFTDIISYLNEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G++ + I L + N+W +P+K I+KG + F
Sbjct: 58 LNDTRVLPARLHGIK----DETGAHIEVLLLKQKEGNAWETLVKPAKRIRKGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+AT +++ G +L F+ GI E + +G +PLPPYI + R Y
Sbjct: 111 -GDGALKATCLEELEHGGRILEFTYEGIFYE-VLEQLGEMPLPPYIKEQLADQDR----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEDLLAKISAKGVEIIFVTLHVGLGTFRPVDVEDTTNHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + +A +N +K++GG++V+VGTTS+R LET A+ DG + SG+T IFI+P
Sbjct: 225 HSEFYRLTEESAARINQIKAQGGKVVAVGTTSIRTLETIASRHDGKLVAESGWTEIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+AVD L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD
Sbjct: 285 GYTFQAVDALITNFHLPKSTLIMLVSALSDRTKILAAYNHAVEEQYRFFSFGD 337
>gi|254852155|ref|ZP_05241503.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL R2-503]
gi|254931466|ref|ZP_05264825.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes HPB2262]
gi|300764802|ref|ZP_07074792.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL N1-017]
gi|258605458|gb|EEW18066.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL R2-503]
gi|293583018|gb|EFF95050.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes HPB2262]
gi|300514478|gb|EFK41535.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL N1-017]
gi|328465567|gb|EGF36796.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes 1816]
gi|328474891|gb|EGF45691.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes 220]
Length = 342
Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 156/353 (44%), Positives = 221/353 (62%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++LN DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKKSGD---IKDQHFTDIISYLNEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G++ + I L + N+W +P+K I+KG + F
Sbjct: 58 LNDTRVLPARLHGIK----DETGAHIEVLLLKQKEGNAWETLVKPAKRIRKGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A +++ G +L FS GI E + +G +PLPPYI + R Y
Sbjct: 111 -GDGALKAICLEELEHGGRILEFSYEGIFYE-VLEQLGEMPLPPYIKEQLADQDR----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEDLLAKISAKGVEIIFVTLHVGLGTFRPVDVEDTTNHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + +A+ +N +K++GG++V+VGTTS+R LET A+ DG + SG+T IFI+P
Sbjct: 225 HSEFYRLTEESAERINKIKAQGGKVVAVGTTSIRTLETIASRHDGKLVAESGWTEIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+AVD L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD
Sbjct: 285 GYTFQAVDALITNFHLPKSTLIMLVSALSDRTKILAAYNHAVEEQYRFFSFGD 337
>gi|254518553|ref|ZP_05130609.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
sp. 7_2_43FAA]
gi|226912302|gb|EEH97503.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
sp. 7_2_43FAA]
Length = 342
Score = 290 bits (742), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 211/356 (59%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDFDLP IA P+ RDS+RLMV+ N I D+ +LN D +V
Sbjct: 1 MKVSDFDFDLPEELIAQHPLEKRDSSRLMVLDKNTG---EIEHKSFHDVIEYLNEGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + I L R+ + W A+P K K G F
Sbjct: 58 LNNTRVMPARLIGEKEGTGGK----IEFLLLKRIEGDRWECLAKPGKRAKVGQKFTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L TV+D G ++ FS GI E+ + +G +PLPPYI K R Y
Sbjct: 111 -GEGKLICTVVDIVEEGNRIIEFSYEGI-FEQVLDELGEMPLPPYITEKLEDKER----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL + + G+ + ++TLHVG GTF PVKVED ++HIM
Sbjct: 165 QTVYSKEKGSAAAPTAGLHFTEELLKEIKAKGVNIAYLTLHVGLGTFRPVKVEDINEHIM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D A +N K RG ++++VGTTS R LET ++G + SG+T+IFI PG
Sbjct: 225 HSEYYHLDNENADLINETKKRGNKVIAVGTTSTRTLETIGDDNGFVREQSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+++ +D L++NFHLP+STL+MLVSA G E Y A+ YRF+S+GD+ L+
Sbjct: 285 YKYKVIDELITNFHLPESTLIMLVSALAGKEHVMNAYNEAVKEKYRFFSFGDSMLI 340
>gi|226224132|ref|YP_002758239.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes Clip81459]
gi|254824410|ref|ZP_05229411.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL J1-194]
gi|254992899|ref|ZP_05275089.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL J2-064]
gi|255520699|ref|ZP_05387936.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL J1-175]
gi|259551458|sp|C1KVH8|QUEA_LISMC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|225876594|emb|CAS05303.1| Putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Listeria monocytogenes serotype 4b str. CLIP 80459]
gi|293593645|gb|EFG01406.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL J1-194]
Length = 342
Score = 290 bits (742), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 156/353 (44%), Positives = 221/353 (62%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++LN DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKKSGD---IKDQHFTDIISYLNEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G++ + I L + N+W +P+K I+KG + F
Sbjct: 58 LNDTRVLPARLHGIK----DETGAHIEVLLLKQKEGNAWETLVKPAKRIRKGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A +++ G +L FS GI E + +G +PLPPYI + R Y
Sbjct: 111 -GDGALKAICLEELEHGGRILEFSYEGIFYE-VLEQLGEMPLPPYIKEQLADQDR----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEDLLAKISAKGVEIIFVTLHVGLGTFRPVDVEDTANHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + +A+ +N +K++GG++V+VGTTS+R LET A+ DG + SG+T IFI+P
Sbjct: 225 HSEFYRLTEESAERINKIKAQGGKVVAVGTTSIRTLETIASRHDGKLVAESGWTEIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+AVD L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD
Sbjct: 285 GYTFQAVDALITNFHLPKSTLIMLVSALSDRTKILAAYNHAVEEQYRFFSFGD 337
>gi|223933305|ref|ZP_03625294.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Streptococcus suis 89/1591]
gi|330832602|ref|YP_004401427.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Streptococcus suis ST3]
gi|223898035|gb|EEF64407.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Streptococcus suis 89/1591]
gi|329306825|gb|AEB81241.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Streptococcus suis ST3]
Length = 342
Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 166/355 (46%), Positives = 216/355 (60%), Gaps = 21/355 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVIS--DHLVSDLPAFLNSNDA 58
M +FDFDLP IA P+ RDS++L+++ +V S DH++ L N DA
Sbjct: 1 MNTADFDFDLPEELIAQVPLEKRDSSKLLILDREKQS-MVDSHFDHIIDQL----NPGDA 55
Query: 59 IVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
+V NNT+V+ A+L G + + + L N W V A+P+K +K G + F
Sbjct: 56 LVMNNTRVLPARLYGYKPETMGH----VELLLLKNTQGNQWEVLAKPAKRLKVGTTVAF- 110
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
G RL AT++++ G ++ FS GI LE SL G +PLPPYI K D
Sbjct: 111 ---GDGRLTATIVEELEHGGRIVEFSYEGIFLEVLESL-GEMPLPPYIHEK----LEDRE 162
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ D+H
Sbjct: 163 RYQTVYAKENGSAAAPTAGLHFTQELLEKIEAKGVKLVYLTLHVGLGTFRPVSVDNVDEH 222
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFI 297
MHSE + A AQ LN VK GGRIV+VGTTS+R LET + DG + SG+TNIFI
Sbjct: 223 EMHSEFYNLSAEAAQTLNQVKDSGGRIVAVGTTSIRTLETIGNKFDGRLEADSGWTNIFI 282
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY FR VD +NFHLPKSTL+MLVSAF G E T Y+HA+ YRF+S+GD
Sbjct: 283 KPGYTFRIVDAFSTNFHLPKSTLVMLVSAFAGREFTLDAYKHAVEERYRFFSFGD 337
>gi|51892303|ref|YP_074994.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase
[Symbiobacterium thermophilum IAM 14863]
gi|81610582|sp|Q67Q93|QUEA_SYMTH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|51855992|dbj|BAD40150.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase
[Symbiobacterium thermophilum IAM 14863]
Length = 341
Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 155/357 (43%), Positives = 213/357 (59%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+DLP IA +PV PRD++RLMVVH I DLP +L D +V
Sbjct: 1 MRLSDFDYDLPKELIAQKPVEPRDASRLMVVH---RASGAIEHRCFRDLPEYLRPGDGLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N T+V+ A+L G R + + L R+ + W +P K + G+ + F
Sbjct: 58 INETRVMPARLLGSR----EQTGGAMEVLLLKRLDRDRWETLVKPGKKARPGERIVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L TV+ + G ++ F G+ E + +G +PLPPYI + R Y
Sbjct: 111 -GDGLLVGTVVGPTDYGGRVIDFHYEGV-FENLLERLGQMPLPPYIHEQLEEPER----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GS AAPTAGLHFT+ LL RL + G++++ +TLHVG GTF PV+VED H M
Sbjct: 165 QTVYAREWGSAAAPTAGLHFTAELLDRLAARGVEIHRITLHVGLGTFRPVEVEDPTQHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +N+V+ GGR+V+VGTTS+R LET EDG + P G+T+IFI PG
Sbjct: 225 HSEFYHVSPEAAAGINAVRKGGGRLVAVGTTSVRTLETVADEDGTVRPGEGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YRF+AVD L++NFHLPKSTLLMLVSA G + + Y+ A++ YRF+S+GD L+
Sbjct: 285 YRFKAVDALVTNFHLPKSTLLMLVSALAGHDLIMRAYREAVAQRYRFFSFGDAMLIL 341
>gi|222153368|ref|YP_002562545.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus uberis 0140J]
gi|222114181|emb|CAR42709.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus uberis 0140J]
Length = 342
Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 163/353 (46%), Positives = 214/353 (60%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RDS+RL+++ ++D + LN DA+V
Sbjct: 1 MHTNDFDFDLPEELIAQTPLEKRDSSRLLIIDHQTKE---MTDSHFDQIVDQLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L+G + + L + W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLHGEK----PDTHGHVELLLLKNTKEDQWEVLAKPAKRLKVGSKVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATVI++ + G ++ FS SGI LE SL G +PLPPYI K R Y
Sbjct: 111 -GDGRLTATVIEELDHGGRIVEFSYSGIFLEVLESL-GEMPLPPYIHEKLEDSER----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ G+ + ++TLHVG GTF PV V+ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEALLKKIKDKGVHLVYLTLHVGLGTFRPVSVDSVDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ GGR+V+VGTTS+R LET T+ DG I SG+TNIFI P
Sbjct: 225 HSEFYHLSEEAAQTLRQVKANGGRLVAVGTTSIRTLETIGTKFDGDIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY+F+ VD +NFHLPKSTL+MLVSAF G E + YQHA++ YRF+S+GD
Sbjct: 285 GYQFKVVDAFSTNFHLPKSTLVMLVSAFAGREFVLEAYQHAVNEKYRFFSFGD 337
>gi|46907759|ref|YP_014148.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes str. 4b F2365]
gi|67460874|sp|Q71ZD9|QUEA_LISMF RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|46881028|gb|AAT04325.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes serotype 4b str. F2365]
Length = 342
Score = 289 bits (739), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 155/353 (43%), Positives = 220/353 (62%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++LN DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKKSGD---IKDQHFTDIISYLNEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G++ + I L + N+W +P+K I+KG + F
Sbjct: 58 LNDTRVLPARLHGIK----DETGAHIEVLLLKQKEGNAWETLVKPAKRIRKGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A +++ G +L FS GI E + +G +PLPPYI + R Y
Sbjct: 111 -GDGALKAICLEELEHGGRILEFSYEGIFYE-VLEQLGEMPLPPYIKEQLADQDR----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y K GS AAPTAGLHFT +LL+++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYGKENGSAAAPTAGLHFTEDLLAKISAKGVEIIFVTLHVGLGTFRPVDVEDTTNHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + +A+ +N +K++GG++V+VGTTS+R LET A+ DG + SG+T IFI+P
Sbjct: 225 HSEFYRLTEESAERINKIKAQGGKVVAVGTTSIRTLETIASRHDGKLVAESGWTEIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+AVD L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD
Sbjct: 285 GYTFQAVDALITNFHLPKSTLIMLVSALSDRTKILAAYNHAVEEQYRFFSFGD 337
>gi|266622484|ref|ZP_06115419.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
hathewayi DSM 13479]
gi|288865792|gb|EFC98090.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
hathewayi DSM 13479]
Length = 365
Score = 288 bits (738), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 155/352 (44%), Positives = 213/352 (60%), Gaps = 16/352 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+F+F+LP IA P+ R S+RL+V+ I D+ ++L D +V
Sbjct: 1 MNVKDFNFELPQELIAQDPLEDRSSSRLLVLDKKTG---EIEHRTFRDILSYLRKGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L GV+ E +I L R + W +P K K G ++ F
Sbjct: 58 INDTKVIPARLFGVK----EGTEAKIEILLLKRRENDIWETLVKPGKKAKIGTVITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L TV+D + G L+ FS GI E + +G +PLPPYI + +D Y
Sbjct: 111 -GEGLLTGTVVDIVDEGNRLIQFSYEGI-FEEILDRLGQMPLPPYITHQ----LKDQTRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL+ + ++G+ + VTLHVG GTF PVKV++ +DH M
Sbjct: 165 QTVYAKHEGSAAAPTAGLHFTKELLAEIEAMGVVIAHVTLHVGLGTFRPVKVDEIEDHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D A+ +N K GGRIV VGTTS R +E+A+++DG++ SG+T IFI PG
Sbjct: 225 HSEFYIVDEAEAKKVNDTKKNGGRIVCVGTTSCRTVESASSDDGVLKAGSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
YRF+ +D L++NFHLP+STL+MLVSA G E Y+ AI YRF+S+GD
Sbjct: 285 YRFKTLDCLITNFHLPESTLVMLVSALAGREHVLNAYEEAIRERYRFFSFGD 336
>gi|254476236|ref|ZP_05089622.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ruegeria
sp. R11]
gi|214030479|gb|EEB71314.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ruegeria
sp. R11]
Length = 353
Score = 288 bits (738), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 161/344 (46%), Positives = 216/344 (62%), Gaps = 14/344 (4%)
Query: 15 IALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGV 74
IA RP PR SARL+V + ISD V+DL +L D +V N+TKVI A+L+G
Sbjct: 15 IATRPAVPRTSARLLVAEADQ-----ISDATVADLGQWLRPGDRLVLNDTKVIPARLSGQ 69
Query: 75 RFCHINR--REKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVID 132
R + ++ TL + SWS +P K +K G+ + FS +RL D
Sbjct: 70 RHRDTAQGPMAAKVEVTLLEPGADGSWSALLKPLKKVKLGEEI-IFSDQLSARL-----D 123
Query: 133 KWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVA 192
+ G+ L F++SG + + ++ G +PLPPYIA KR D +D DYQT +A+ G+VA
Sbjct: 124 RVEDGQGYLAFNLSGDDFDTALAEAGAMPLPPYIAAKRAADEQDKTDYQTVWARNSGAVA 183
Query: 193 APTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTA 252
APTA LHF LL++L +G+ +VTLHVGAGTF+PVKVED H MHSE G + A A
Sbjct: 184 APTASLHFDETLLAQLREMGVSFSYVTLHVGAGTFLPVKVEDVTTHKMHSEWGRVSADAA 243
Query: 253 QALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSN 312
+ + K+ GGR++ VGTT+LRL+E+A G I PW G T+IFI PG+ F D LM+N
Sbjct: 244 AEIAATKAAGGRVIPVGTTALRLIESA-ARSGAIEPWEGDTDIFIYPGFTFNVADALMTN 302
Query: 313 FHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
FHLPKSTL+MLVSA G E +++Y+HA+S YRF+SYGD SLL
Sbjct: 303 FHLPKSTLMMLVSALMGQERIREIYEHAVSQRYRFFSYGDASLL 346
>gi|315303291|ref|ZP_07873926.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
ivanovii FSL F6-596]
gi|313628338|gb|EFR96836.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
ivanovii FSL F6-596]
Length = 342
Score = 288 bits (737), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 156/353 (44%), Positives = 219/353 (62%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++L+ DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKATGE---IKDQHFTDILSYLHEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G++ + I L + N+W +P+K I++G + F
Sbjct: 58 LNDTRVLPARLHGIK----DETGAHIEVLLLKQKEGNTWEALVKPAKRIRQGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+AT +++ G +L FS GI E + +G +PLPPYI + R Y
Sbjct: 111 -GDGALQATCLEELEHGGRILEFSYEGIFYE-VLEQLGEMPLPPYIKEQLADQDR----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEDLLAKIKEKGVEIIFVTLHVGLGTFRPVDVEDTTNHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + A+ +N VK GG++++VGTTS+R LET A+ +G I SG+T+IFI+P
Sbjct: 225 HSEFYRLTEEAAERINRVKETGGKVIAVGTTSIRTLETIASRHEGNIVAESGWTDIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY FRAVD L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD
Sbjct: 285 GYTFRAVDALITNFHLPKSTLIMLVSALSDRNKILTAYNHAVEEQYRFFSFGD 337
>gi|83309697|ref|YP_419961.1| S-adenosylmethionine tRNA-ribosyltransferase-isomerase
[Magnetospirillum magneticum AMB-1]
gi|82944538|dbj|BAE49402.1| S-adenosylmethionine tRNA-ribosyltransferase-isomerase
[Magnetospirillum magneticum AMB-1]
Length = 291
Score = 288 bits (737), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 153/298 (51%), Positives = 198/298 (66%), Gaps = 12/298 (4%)
Query: 59 IVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
+VFN+TKVI A+L G R + TLH R + W +ARP+K +K GD + F
Sbjct: 1 MVFNDTKVIPARLLG------RRGLAGVELTLHQRTGLSQWKAFARPAKKLKPGDRVDF- 53
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
A V +K GE+ L F SG +L + G +PLPPYI R+ D RD
Sbjct: 54 ----AEGFSAVVAEKGEMGEVTLDFDRSGEDLMVALETHGHLPLPPYI-RQGTADERDKG 108
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ +G+VAAPTAGLHFT LL+ L + G+K VTLHVGAGTF+PVKV+DTDDH
Sbjct: 109 DYQTVFAREKGAVAAPTAGLHFTPELLAALDARGVKRVTVTLHVGAGTFLPVKVDDTDDH 168
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH EIG + TA A+N+ ++ GGR+V+VGTTS RLLE+A G ++P+ G T+IFIT
Sbjct: 169 RMHQEIGVVTPETAAAVNAARAAGGRVVAVGTTSARLLESAADPLGTLHPFDGATDIFIT 228
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PG+ FR VD+L++NFHLP+STL ML+SAF G+E K Y+HA + YRFYSYGD LL
Sbjct: 229 PGHVFRQVDVLLTNFHLPRSTLFMLISAFAGLERMKAAYEHAKAAGYRFYSYGDCCLL 286
>gi|303230199|ref|ZP_07316967.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Veillonella
atypica ACS-134-V-Col7a]
gi|302515125|gb|EFL57099.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Veillonella
atypica ACS-134-V-Col7a]
Length = 341
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 158/356 (44%), Positives = 216/356 (60%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD+DLP IA PV PRD++RL+ + ++ H DL L + D +V
Sbjct: 1 MKVTDFDYDLPEELIAQHPVEPRDTSRLLTLD-KITGEYTHKAHFY-DLLDELQAGDVLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L G R ++ L N W +P K G ++ F
Sbjct: 59 FNNTKVIPARLYGQR----EGSGGKVEVLLLTPCGENRWECLVKPGKKCPIGQVIVF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
RL+ATV+DK + G ++ F+ G+ + I +G +PLPPYI K D Y
Sbjct: 112 --DERLKATVLDKTDFGGRIVEFTCDGV-FDDIIQEIGEMPLPPYIHEK----LEDKDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ + G+++ FVTLHVG GTF PV VE +DH M
Sbjct: 165 QTVYAKEKGSAAAPTAGLHFTPELLEKIKAKGVELEFVTLHVGLGTFRPVSVETIEDHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA+ +N KS+G RI++VGTTS+R LE+A+T+DGI++ SG+T IFI PG
Sbjct: 225 HSEFYSVSEDTARRINEAKSKGKRIIAVGTTSIRTLESASTDDGILHATSGWTKIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STLLML+SA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YKFKMVDALVTNFHLPQSTLLMLISALAGREHCLAAYKAAVKERYRFFSFGDAMFI 340
>gi|154483721|ref|ZP_02026169.1| hypothetical protein EUBVEN_01425 [Eubacterium ventriosum ATCC
27560]
gi|149735631|gb|EDM51517.1| hypothetical protein EUBVEN_01425 [Eubacterium ventriosum ATCC
27560]
Length = 380
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 156/356 (43%), Positives = 209/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + ++ +DLP IA P+ R S+RLMV+ + I H+ D+ +LN ND +V
Sbjct: 39 MSLHDYYYDLPEELIAQDPLEDRSSSRLMVLDKDTG---EIEHHIFKDIIDYLNPNDCLV 95
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + + +I L R + W +P K K G ++ F
Sbjct: 96 INDTKVIPARLYGSKVG----TDAKIEVLLLKRKENDVWETLVKPGKKCKPGTVISF--- 148
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L VID G L+ F+ GI E + +G +PLPPYI K R Y
Sbjct: 149 -GDGILTGEVIDVVEEGNRLIKFTYEGI-FEEVLDKLGEMPLPPYITHKLEDKNR----Y 202
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ GIK+ VTLHVG GTF PVKVE+ +H M
Sbjct: 203 QTVYAKYEGSAAAPTAGLHFTKELLEKIKEKGIKIAHVTLHVGLGTFRPVKVENILEHHM 262
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D A +N ++ GGR+++VGTTS R LET T E+GI++ SG+T IFI PG
Sbjct: 263 HSEFYMVDEEDANMINECRANGGRVIAVGTTSTRTLETVTDENGIVHSGSGWTQIFIYPG 322
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+A+D L++NFHLP+STLLMLVSA G E Y A+ YRF+S+GD +
Sbjct: 323 YQFKAIDCLITNFHLPESTLLMLVSALAGRENVLNAYNKAVEEKYRFFSFGDAMFI 378
>gi|303231808|ref|ZP_07318524.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Veillonella
atypica ACS-049-V-Sch6]
gi|302513515|gb|EFL55541.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Veillonella
atypica ACS-049-V-Sch6]
Length = 341
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 158/356 (44%), Positives = 216/356 (60%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD+DLP IA PV PRD++RL+ + ++ H DL L + D +V
Sbjct: 1 MKVTDFDYDLPEELIAQHPVEPRDTSRLLTLD-KITGEYTHKAHFY-DLLDELQAGDVLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L G R ++ L N W +P K G ++ F
Sbjct: 59 FNNTKVIPARLYGQR----EGSGGKVEVLLLTPCGENRWECLVKPGKKCPIGQVIVF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
RL+ATV+DK + G ++ F+ G+ + I +G +PLPPYI K D Y
Sbjct: 112 --DDRLKATVLDKTDFGGRIVEFTCDGV-FDDIIQEIGEMPLPPYIHEK----LEDKDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ + G+++ FVTLHVG GTF PV VE +DH M
Sbjct: 165 QTVYAKEKGSAAAPTAGLHFTPELLEKIKAKGVELEFVTLHVGLGTFRPVSVETIEDHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA+ +N KS+G RI++VGTTS+R LE+A+T+DGI++ SG+T IFI PG
Sbjct: 225 HSEFYSVSEDTARRINEAKSKGKRIIAVGTTSIRTLESASTDDGILHATSGWTKIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STLLML+SA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YKFKMVDALVTNFHLPQSTLLMLISALAGREHCLAAYKAAVKERYRFFSFGDAMFI 340
>gi|304317012|ref|YP_003852157.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacterium thermosaccharolyticum DSM 571]
gi|302778514|gb|ADL69073.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacterium thermosaccharolyticum DSM 571]
Length = 341
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 157/356 (44%), Positives = 216/356 (60%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EF +DLP IA P+ RD +RLM+++ I + ++ ++LN ND +V
Sbjct: 1 MNLHEFYYDLPEELIAQEPLKNRDESRLMILN---RLTGEIKHDIFKNIISYLNPNDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L GVR +I L R+S + W + +P + K G F
Sbjct: 58 LNDTKVIPARLIGVR----EDTGGKIEFVLLKRLSSDEWEILVKPGRRAKIGSKFIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A VI + G ++ FS GI E + +G +P+PPYI +K D Y
Sbjct: 111 -GNGELKAEVISNTDVGGRIVRFSYEGI-FEEVLDKLGEMPVPPYIKKK----LEDKNMY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT+ LL + G+K FVTLHVG GTF PVK E + H M
Sbjct: 165 QTVYAKHEGSAAAPTAGLHFTNKLLDDIRKYGVKTVFVTLHVGLGTFRPVKEEVIEKHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + AQA+N+ + GGRI+SVGTTS R LET E+GII+ SG+T+IFI PG
Sbjct: 225 HSEFYTVTEEAAQAINTARESGGRIISVGTTSTRTLETVADENGIIHAGSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+++A+D +++NFHLP+STL+M++SAF G E Y+ AI + YRFYS+GD L+
Sbjct: 285 YKYKAIDGIITNFHLPESTLIMMISAFAGKENVMNAYKTAIDNKYRFYSFGDAMLI 340
>gi|146318286|ref|YP_001197998.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Streptococcus suis 05ZYH33]
gi|146320479|ref|YP_001200190.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Streptococcus suis 98HAH33]
gi|145689092|gb|ABP89598.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Streptococcus suis 05ZYH33]
gi|145691285|gb|ABP91790.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Streptococcus suis 98HAH33]
gi|292558081|gb|ADE31082.1| Queuosine biosynthesis protein [Streptococcus suis GZ1]
Length = 344
Score = 287 bits (735), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 165/355 (46%), Positives = 216/355 (60%), Gaps = 21/355 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVIS--DHLVSDLPAFLNSNDA 58
M +FDFDLP IA P+ RDS++L+++ +V S DH++ L N DA
Sbjct: 3 MNTADFDFDLPEELIAQVPLEKRDSSKLLILDREKRS-MVDSHFDHIIDQL----NPGDA 57
Query: 59 IVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
+V NNT+V+ A+L G + + + L + W V A+P+K +K G + F
Sbjct: 58 LVMNNTRVLPARLYGYKPETMGH----VELLLLKNTQGDQWEVLAKPAKRLKVGTTVAF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
G RL AT++++ G ++ FS GI LE SL G +PLPPYI K D
Sbjct: 113 ---GDGRLTATIVEELEHGGRIVEFSYEGIFLEVLESL-GEMPLPPYIHEK----LEDRE 164
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ D+H
Sbjct: 165 RYQTVYAKENGSAAAPTAGLHFTQELLEKIEAKGVKLVYLTLHVGLGTFRPVSVDNVDEH 224
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFI 297
MHSE + A AQ LN VK GGRIV+VGTTS+R LET + DG + SG+TNIFI
Sbjct: 225 EMHSEFYNLSAEAAQTLNQVKDSGGRIVAVGTTSIRTLETIGNKFDGRLQADSGWTNIFI 284
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY FR VD +NFHLPKSTL+MLVSAF G E T Y+HA+ YRF+S+GD
Sbjct: 285 KPGYTFRIVDAFSTNFHLPKSTLVMLVSAFAGREFTLDAYKHAVEERYRFFSFGD 339
>gi|253751451|ref|YP_003024592.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus suis SC84]
gi|253753352|ref|YP_003026493.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus suis P1/7]
gi|253755819|ref|YP_003028959.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus suis BM407]
gi|251815740|emb|CAZ51341.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus suis SC84]
gi|251818283|emb|CAZ56092.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus suis BM407]
gi|251819598|emb|CAR45300.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus suis P1/7]
gi|319757868|gb|ADV69810.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Streptococcus suis JS14]
Length = 342
Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 165/355 (46%), Positives = 216/355 (60%), Gaps = 21/355 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVIS--DHLVSDLPAFLNSNDA 58
M +FDFDLP IA P+ RDS++L+++ +V S DH++ L N DA
Sbjct: 1 MNTADFDFDLPEELIAQVPLEKRDSSKLLILDREKRS-MVDSHFDHIIDQL----NPGDA 55
Query: 59 IVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
+V NNT+V+ A+L G + + + L + W V A+P+K +K G + F
Sbjct: 56 LVMNNTRVLPARLYGYKPETMGH----VELLLLKNTQGDQWEVLAKPAKRLKVGTTVAF- 110
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
G RL AT++++ G ++ FS GI LE SL G +PLPPYI K D
Sbjct: 111 ---GDGRLTATIVEELEHGGRIVEFSYEGIFLEVLESL-GEMPLPPYIHEK----LEDRE 162
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ D+H
Sbjct: 163 RYQTVYAKENGSAAAPTAGLHFTQELLEKIEAKGVKLVYLTLHVGLGTFRPVSVDNVDEH 222
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFI 297
MHSE + A AQ LN VK GGRIV+VGTTS+R LET + DG + SG+TNIFI
Sbjct: 223 EMHSEFYNLSAEAAQTLNQVKDSGGRIVAVGTTSIRTLETIGNKFDGRLQADSGWTNIFI 282
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY FR VD +NFHLPKSTL+MLVSAF G E T Y+HA+ YRF+S+GD
Sbjct: 283 KPGYTFRIVDAFSTNFHLPKSTLVMLVSAFAGREFTLDAYKHAVEERYRFFSFGD 337
>gi|302023597|ref|ZP_07248808.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus suis 05HAS68]
Length = 342
Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 165/355 (46%), Positives = 215/355 (60%), Gaps = 21/355 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVIS--DHLVSDLPAFLNSNDA 58
M +FDFDLP IA P+ RDS++L+++ +V S DH++ L N DA
Sbjct: 1 MNTADFDFDLPEELIAQVPLEKRDSSKLLILDREKQS-MVDSHFDHIIDQL----NPGDA 55
Query: 59 IVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
+V NNT+V+ A+L G + + + L N W V A+P+K +K G + F
Sbjct: 56 LVMNNTRVLPARLYGYKPETMGH----VELLLLKNTQGNQWEVLAKPAKRLKVGTTVAF- 110
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
G RL AT++++ G ++ FS GI LE SL G +PLPPYI K D
Sbjct: 111 ---GDGRLTATIVEELEHGGRIVEFSYEGIFLEVLESL-GEMPLPPYIHEK----LEDRE 162
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ D+H
Sbjct: 163 RYQTVYAKENGSAAAPTAGLHFTQELLEKIEAKGVKLVYLTLHVGLGTFRPVSVDNVDEH 222
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFI 297
MHSE + A AQ LN VK GRIV+VGTTS+R LET + DG + SG+TNIFI
Sbjct: 223 EMHSEFYNLSAEAAQTLNQVKDSSGRIVAVGTTSIRTLETIGNKFDGRLEADSGWTNIFI 282
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY FR VD +NFHLPKSTL+MLVSAF G E T Y+HA+ YRF+S+GD
Sbjct: 283 KPGYTFRIVDAFSTNFHLPKSTLVMLVSAFAGREFTLDAYKHAVEERYRFFSFGD 337
>gi|323485700|ref|ZP_08091037.1| hypothetical protein HMPREF9474_02788 [Clostridium symbiosum
WAL-14163]
gi|323400963|gb|EGA93324.1| hypothetical protein HMPREF9474_02788 [Clostridium symbiosum
WAL-14163]
Length = 347
Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 155/359 (43%), Positives = 217/359 (60%), Gaps = 16/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+F +DLP IA P+ R S+RL+V++ + I + D+ ++L D +V
Sbjct: 1 MDVKDFYYDLPEELIAQDPLEDRSSSRLLVLNKDTG---EIQHKVFRDILSYLRKGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + + +I L R + W +P K K G +++F
Sbjct: 58 INDTKVIPARLIGSK----EGTDAKIEVLLLKRRENDIWETLVKPGKKAKIGTVINF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L+ TV+D G L+ FS GI E + +G +PLPPYI + +D Y
Sbjct: 111 -GEGLLKGTVVDVVEEGNRLIQFSYKGI-FEEILDELGQMPLPPYITHQ----LQDKKRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT+ LL ++ GI++ VTLHVG GTF PVKV++ +H M
Sbjct: 165 QTVYAKHEGSAAAPTAGLHFTNELLGKIAEKGIEIAHVTLHVGLGTFRPVKVDNVLEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +N K +GGR++ VGTTS R LE+A EDGI+ SG+T+IFI PG
Sbjct: 225 HSEFYIVEEEEARKINDTKKKGGRVICVGTTSCRTLESAAGEDGILKAGSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRF+ +D L++NFHLP+STL+MLVSA G E K Y+ AI YRF+S+GD + K
Sbjct: 285 YRFKILDCLITNFHLPESTLVMLVSALAGREHVLKAYEEAIKERYRFFSFGDAMFIASK 343
>gi|160935784|ref|ZP_02083159.1| hypothetical protein CLOBOL_00674 [Clostridium bolteae ATCC
BAA-613]
gi|158441528|gb|EDP19238.1| hypothetical protein CLOBOL_00674 [Clostridium bolteae ATCC
BAA-613]
Length = 349
Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 151/356 (42%), Positives = 212/356 (59%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FD++LP IA P+ R ++RLMV+ I + D+ +L D +V
Sbjct: 1 MDVKDFDYELPEELIAQDPLEDRSASRLMVLDRETG---EIQHRIFKDITEYLRPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L GV+ +I L R + W RP K K G ++ F
Sbjct: 58 INDTKVIPARLFGVK----KDTGAKIEILLLKRRENDVWETLVRPGKKAKPGTVIEF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L TV+D + G L+ F GI E + +G +PLPPYI + +D Y
Sbjct: 111 -GEGLLTGTVVDTVDDGNRLIQFHYKGI-FEEILDQLGQMPLPPYITHQ----LKDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +GS AAPTAGLHFT LL+ + +G+K+ VTLHVG GTF PVKVE+ DH M
Sbjct: 165 QTVYARHEGSAAAPTAGLHFTQELLAEIEGMGVKIAHVTLHVGLGTFRPVKVENVQDHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +N ++ GGR++ VGTTS R +E+A+TEDG++ +G+T IFI PG
Sbjct: 225 HSEFYIVEESEAKKVNDTRAAGGRVICVGTTSCRTVESASTEDGVLKAGTGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YRFKVLDALITNFHLPQSTLVMLVSALAGREHILDAYREAVKEGYRFFSFGDAMFI 340
>gi|294795131|ref|ZP_06760265.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Veillonella
sp. 3_1_44]
gi|294453923|gb|EFG22298.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Veillonella
sp. 3_1_44]
Length = 341
Score = 286 bits (732), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 154/356 (43%), Positives = 212/356 (59%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD++LP IA PV PRD+ARL+ + +S + H DL L+ D +V
Sbjct: 1 MKVTDFDYELPEELIAQHPVEPRDTARLLTLD-KVSGEVKHKGHFY-DLLEELHEGDVLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L G H ++ L N W +P K G ++ F
Sbjct: 59 FNNTKVIPARLYG----HRQGSGGKVEVLLLTPCGENRWECLVKPGKKCPIGQVIEF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
RL +IDK N G ++ F+ +G+ + I +G +PLPPYI K D Y
Sbjct: 112 --DDRLSGVIIDKTNFGGRIIQFTCNGV-FDDVIQEIGEMPLPPYIHEK----LEDKDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT +LL ++ + G+++ FVTLHVG GTF PV E +DH M
Sbjct: 165 QTVYAKEKGSAAAPTAGLHFTPDLLEKIKAKGVELEFVTLHVGLGTFRPVSAETIEDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA +N+ K +G RI++VGTTS+R LE+AT +DG++ SG+T IFI PG
Sbjct: 225 HSEFFVVPQDTANRINAAKQKGSRIIAVGTTSVRTLESATNDDGVLQGMSGWTQIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STLLML+SA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YKFKMIDALVTNFHLPQSTLLMLISALAGREHCLAAYEEAVRERYRFFSFGDAMFI 340
>gi|289434811|ref|YP_003464683.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
seeligeri serovar 1/2b str. SLCC3954]
gi|289171055|emb|CBH27597.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
seeligeri serovar 1/2b str. SLCC3954]
Length = 342
Score = 286 bits (732), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 155/353 (43%), Positives = 219/353 (62%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++L+ DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKATGE---IKDQHFTDILSYLHEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G++ + I L + N+W +P+K I++G + F
Sbjct: 58 LNDTRVLPARLHGIK----DETGAHIEVLLLKQKEGNAWETLVKPAKRIRQGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+AT +++ G +L FS GI E + +G +PLPPYI + R Y
Sbjct: 111 -GDGALKATCLEELEHGGRILEFSYEGIFYE-VLEQLGEMPLPPYIKEQLADQDR----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEDLLAKIKAKGVEIIFVTLHVGLGTFRPVDVEDTANHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + A+ +N VK GG++V+VGTTS+R LET A+ +G + SG+T IFI+P
Sbjct: 225 HSEFYRLTEEAAERINKVKETGGKVVAVGTTSIRTLETIASRHEGKLVAESGWTEIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+AVD L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD
Sbjct: 285 GYTFQAVDALITNFHLPKSTLIMLVSALSDRNKILTAYNHAVEQQYRFFSFGD 337
>gi|323706517|ref|ZP_08118076.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacterium xylanolyticum LX-11]
gi|323534147|gb|EGB23939.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacterium xylanolyticum LX-11]
Length = 341
Score = 286 bits (732), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 151/356 (42%), Positives = 217/356 (60%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EF +DLP IA P+ RD +RLMV++ + I + ++ +L ND +V
Sbjct: 1 MNLHEFYYDLPEELIAQEPLQNRDESRLMVLNKDTGE---IKHDIFKNILTYLKPNDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L GVR +I L R+ + W + +P + K G F
Sbjct: 58 LNDTKVIPARLYGVR----EDTGGKIEFVLLKRLGIDEWEILVKPGRRAKIGSKFIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A ++ + G ++ FS G+ E + +G +P+PPYI +K +D Y
Sbjct: 111 -GNGELKALILSDTDAGGRIVRFSYEGV-FEEVLDKLGEMPIPPYIKKK----LKDKNMY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT+ LL ++ G+K F+TLHVG GTF PVK E ++H M
Sbjct: 165 QTVYAKHEGSAAAPTAGLHFTNELLDKIREFGVKTVFITLHVGLGTFRPVKEEVIENHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A A+N+ + GGRI+SVGTTS R LET +DGII+ SG+T+IFI PG
Sbjct: 225 HSEFYIVNEDAADAINAARKAGGRIISVGTTSTRTLETVADDDGIIHAGSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+++A+D +++NFHLP+STL+M++SAF G E Y+ AI + YRFYS+GD L+
Sbjct: 285 YKYKAIDGIITNFHLPESTLIMMISAFAGKENVMNAYKTAIENKYRFYSFGDAMLI 340
>gi|323695094|ref|ZP_08109236.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
symbiosum WAL-14673]
gi|323500849|gb|EGB16769.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
symbiosum WAL-14673]
Length = 347
Score = 286 bits (732), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 155/359 (43%), Positives = 217/359 (60%), Gaps = 16/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+F +DLP IA P+ R S+RL+V++ + I + D+ ++L D +V
Sbjct: 1 MDVKDFYYDLPEELIAQDPLEDRSSSRLLVLNKDTG---EIQHKVFRDILSYLRKGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + + +I L R + W +P K K G +++F
Sbjct: 58 INDTKVIPARLIGSK----EGTDAKIEVLLLKRRENDIWETLVKPGKKAKIGTVINF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L+ TV+D G L+ FS GI E + +G +PLPPYI + +D Y
Sbjct: 111 -GEGLLKGTVVDVVEEGNRLIQFSYKGI-FEEILDELGQMPLPPYITHQ----LQDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT+ LL ++ GI++ VTLHVG GTF PVKV++ +H M
Sbjct: 165 QTVYAKHEGSAAAPTAGLHFTNELLGKIAEKGIEIAHVTLHVGLGTFRPVKVDNVLEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +N K +GGR++ VGTTS R LE+A EDGI+ SG+T+IFI PG
Sbjct: 225 HSEFYIVEEEEARKINDTKKKGGRVICVGTTSCRTLESAAGEDGILKAGSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRF+ +D L++NFHLP+STL+MLVSA G E K Y+ AI YRF+S+GD + K
Sbjct: 285 YRFKILDCLITNFHLPESTLVMLVSALAGREHVLKAYEEAIKERYRFFSFGDAMFIASK 343
>gi|313894608|ref|ZP_07828171.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Veillonella
sp. oral taxon 158 str. F0412]
gi|313440798|gb|EFR59227.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Veillonella
sp. oral taxon 158 str. F0412]
Length = 341
Score = 286 bits (731), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 155/356 (43%), Positives = 211/356 (59%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD++LP IA PV PRD+ARL+ + ++ +V +H DL L+ D +V
Sbjct: 1 MKVIDFDYELPEELIAQHPVEPRDTARLLTLD-KVTGEVVHKEHFY-DLLEELHEGDVLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L G H ++ L N W +P K G ++ F
Sbjct: 59 FNNTKVIPARLYG----HRQGSGGKVEVLLLTPCGENRWECLVKPGKKCPVGQVIEF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
RL TVIDK G ++ F+ +G+ + I +G +PLPPYI K D Y
Sbjct: 112 --DDRLSGTVIDKTEFGGRIIEFTCNGV-FDDVIQEIGEMPLPPYIHEK----LEDKDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+++ FVTLHVG GTF PV E +DH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTPELLEKIKAKGVELEFVTLHVGLGTFRPVSAETIEDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA +N+ K +G RI++VGTTS+R LE+AT ++GI+ SG T IFI PG
Sbjct: 225 HSEFFVVSQDTADRINAAKQKGSRIIAVGTTSVRTLESATNDEGILQGISGTTQIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STLLML+SA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YKFKMIDALVTNFHLPQSTLLMLISALAGREHCLAAYEEAVKERYRFFSFGDAMFI 340
>gi|294793309|ref|ZP_06758454.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Veillonella
sp. 6_1_27]
gi|294455740|gb|EFG24105.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Veillonella
sp. 6_1_27]
Length = 341
Score = 285 bits (730), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 212/356 (59%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD++LP IA PV PRD+ARL+ + +S + H DL L+ D +V
Sbjct: 1 MKVTDFDYELPEELIAQHPVEPRDTARLLTLD-KVSGEVKHKGHFY-DLLEELHEGDVLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L G H ++ L N W +P K G ++ F
Sbjct: 59 FNNTKVIPARLYG----HRQGSGGKVEVLLLTPCGENRWECLVKPGKKCPVGQVIEF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
RL +IDK + G ++ F+ +G+ + I +G +PLPPYI K D Y
Sbjct: 112 --DDRLSGVIIDKTDFGGRIIQFTCNGV-FDDVIQEIGEMPLPPYIHEK----LEDKDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT +LL ++ + G+++ FVTLHVG GTF PV E +DH M
Sbjct: 165 QTVYAKEKGSAAAPTAGLHFTPDLLEKIKAKGVELEFVTLHVGLGTFRPVSAETIEDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA +N+ K +G RI++VGTTS+R LE+AT +DG++ SG+T IFI PG
Sbjct: 225 HSEFFVVSQDTADRINAAKQKGSRIIAVGTTSVRTLESATNDDGVLQGMSGWTQIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STLLML+SA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YKFKMIDALVTNFHLPQSTLLMLISALAGREHCLAAYEEAVRERYRFFSFGDAMFI 340
>gi|313633141|gb|EFS00030.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
seeligeri FSL N1-067]
Length = 342
Score = 285 bits (730), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 155/353 (43%), Positives = 218/353 (61%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++L+ DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKATGE---IKDQHFTDILSYLHEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G + + I L + N+W +P+K I++G + F
Sbjct: 58 LNDTRVLPARLHGTK----DETGAHIEVLLLKQKEGNAWETLVKPAKRIRQGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+AT +++ G +L FS GI E + +G +PLPPYI + R Y
Sbjct: 111 -GDGALKATCLEELEHGGRILEFSYEGIFYE-VLEQLGEMPLPPYIKEQLADQDR----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEDLLAKIKAKGVEIIFVTLHVGLGTFRPVDVEDTANHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + A+ +N VK GG++V+VGTTS+R LET A+ +G + SG+T IFI+P
Sbjct: 225 HSEFYRLTEEAAERINKVKETGGKVVAVGTTSIRTLETIASRHEGELVAESGWTEIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+AVD L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD
Sbjct: 285 GYTFQAVDALITNFHLPKSTLIMLVSALSDRNKILTAYNHAVEQQYRFFSFGD 337
>gi|114797801|ref|YP_761436.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Hyphomonas
neptunium ATCC 15444]
gi|123322972|sp|Q0BYK7|QUEA_HYPNA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|114737975|gb|ABI76100.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Hyphomonas
neptunium ATCC 15444]
Length = 351
Score = 285 bits (728), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 159/359 (44%), Positives = 211/359 (58%), Gaps = 11/359 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F FDLP IALRP P+D+ARL+VVH + + D V DLP +LN+ D +V
Sbjct: 1 MDLSVFQFDLPEDLIALRPAQPQDAARLLVVHGDGR----LIDATVRDLPKYLNTGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHIN-RREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
FN+T+V+ A L GVR R+ E+ L R W ARP + +K GD + FF+
Sbjct: 57 FNDTRVLPAALKGVRPARDGASRDVEVDVNLVERQGDCLWLALARPGRRLKDGDEI-FFA 115
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ +R + + GEILL F+ G + + G +PLPPYIAR+RP DA D
Sbjct: 116 EGFSAR----IASRREGGEILLDFNCEGEAMIAALDAHGAMPLPPYIARRRPADAEDRET 171
Query: 180 YQTTYA-KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT +A + SVAAPTAGLHFT LL+ + + G+K V LHVG GTF P++ ++
Sbjct: 172 YQTRFAGEDAASVAAPTAGLHFTPRLLAEVEAAGLKRETVRLHVGLGTFKPLEDRHLSEN 231
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
+H E I A LN+ ++ G R+V VGTT++R LE+ EDG I+ +G T+IF+
Sbjct: 232 RLHEEWRRITPEVADRLNAARAAGARLVPVGTTAMRTLESCAGEDGQIHAATGPTDIFLK 291
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG RA D LM+NFHLP S+L MLVSA G + Y HAI YRFYSYGD LL
Sbjct: 292 PGDPVRATDALMTNFHLPGSSLFMLVSALMGTSLMRAAYAHAIEEKYRFYSYGDACLLL 350
>gi|116872960|ref|YP_849741.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase [Listeria
welshimeri serovar 6b str. SLCC5334]
gi|123461090|sp|A0AIY0|QUEA_LISW6 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|116741838|emb|CAK20962.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
welshimeri serovar 6b str. SLCC5334]
Length = 342
Score = 285 bits (728), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 155/353 (43%), Positives = 217/353 (61%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++LN DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKKSGE---IKDQHFTDILSYLNEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G + + I L + N+W +P+K I+KG + F
Sbjct: 58 LNDTRVLPARLHGTK----DETGAHIEVLLLKQKEGNAWETLVKPAKRIRKGGTITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+AT +++ G +L FS GI E + +G +PLPPYI + R Y
Sbjct: 111 -GNGALKATCLEELEHGGRILEFSYEGIFYE-VLEQLGEMPLPPYIKEQLADQDR----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEDLLAQISAKGVEIIFVTLHVGLGTFRPVDVEDTANHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + A +N +K+ GG++V+VGTTS+R LET A+ +G + SG+T+IFI+P
Sbjct: 225 HSEFYRLTEDAANRINKIKATGGKVVAVGTTSIRTLETIASHNEGKLVAESGWTDIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+AVD L++N HLPKSTL+MLVSA Y HA+ YRF+S+GD
Sbjct: 285 GYTFQAVDALITNLHLPKSTLIMLVSALSNRTNILAAYNHAVEQQYRFFSFGD 337
>gi|134299522|ref|YP_001113018.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Desulfotomaculum reducens MI-1]
gi|172044286|sp|A4J540|QUEA_DESRM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|134052222|gb|ABO50193.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Desulfotomaculum reducens MI-1]
Length = 341
Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 150/357 (42%), Positives = 219/357 (61%), Gaps = 18/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLV-SDLPAFLNSNDAI 59
M + +FDF+LP IA P+ RD +RLM+VH ++ ++H DL +L D +
Sbjct: 1 MQLSDFDFELPEELIAQEPIKQRDQSRLMIVHRDIDR----TEHKTFKDLLQYLQPGDVL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V N++KV+ A++ G + + I L ++S N W +P K K G+IL F
Sbjct: 57 VMNDSKVLPARIYGEKVSTGAK----IEVLLLRQISANQWETLVKPGKRAKIGEILDF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G +++ ++D + G ++ FS L+ + +G++PLPPYI K+P+ D
Sbjct: 111 --GSGKMKGKIVDHTDVGGRVIEFSCQEPFLQV-LEQIGSMPLPPYI--KKPLT--DKQR 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ +GS AAPTAGLHFT LL + + G+ + V LHVG GTF PV+VED H
Sbjct: 164 YQTVYARQEGSAAAPTAGLHFTRELLEEIRNRGVSIVTVLLHVGLGTFRPVQVEDVTSHR 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH E I A+ +N K RGGR+++VGTTS+R LET++ E G + P SGFT+IFI P
Sbjct: 224 MHEEYYEITPQAAEEINQAKLRGGRVIAVGTTSVRCLETSSNEAGQVLPGSGFTDIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ ++ L++NFHLPKS+LLML+SA G E+ K YQ A++ YRF+S+GD L+
Sbjct: 284 GYQFKVIEGLVTNFHLPKSSLLMLISALAGREKILKAYQQAVTEQYRFFSFGDAMLI 340
>gi|269797657|ref|YP_003311557.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Veillonella parvula DSM 2008]
gi|269094286|gb|ACZ24277.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Veillonella parvula DSM 2008]
Length = 341
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 211/356 (59%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD++LP IA P+ PRD+ARL+ + +S + +H DL L+ D +V
Sbjct: 1 MKVTDFDYELPEELIAQHPIEPRDTARLLTLD-KVSGKVSHKEHFY-DLLEELHEGDVLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L G H ++ L N W +P K G ++ F
Sbjct: 59 FNNTKVIPARLYG----HRQGSGGKVEVLLLTPCGENRWECLVKPGKKCPVGQVIEF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
RL VIDK G ++ F+ +G+ + I +G +PLPPYI K D Y
Sbjct: 112 --DDRLRGIVIDKTEFGGRIIEFTCNGV-FDDVIQEIGEMPLPPYIHEK----LEDKDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT +LL ++ + G+++ FVTLHVG GTF PV E +DH M
Sbjct: 165 QTVYAKEKGSAAAPTAGLHFTPDLLEKIKAKGVELEFVTLHVGLGTFRPVSAETIEDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA +N+ K G RI++VGTTS+R LE+AT +DG++ SG+T IFI PG
Sbjct: 225 HSEFFVVSQETADRINAAKRNGRRIIAVGTTSVRTLESATNDDGVLQGMSGWTQIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STLLML+SA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YKFKMIDALVTNFHLPQSTLLMLISALAGREHCLAAYEEAVKERYRFFSFGDAMFI 340
>gi|325295633|ref|YP_004282147.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase
[Desulfurobacterium thermolithotrophum DSM 11699]
gi|325066081|gb|ADY74088.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase
[Desulfurobacterium thermolithotrophum DSM 11699]
Length = 343
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 214/358 (59%), Gaps = 16/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD+ LP IA PV PRDS+RLMV++ N I + D+ +L + D +V
Sbjct: 1 MKVSDFDYKLPKELIAKFPVEPRDSSRLMVLNKNTGK---IEHRIFKDIVEYLKAGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L F ++ K + L + N+W V A+P++ +KKG + F
Sbjct: 58 INDTKVIPARL----FGKLDTGGK-VEILLVRQPGLNTWEVMAKPARKLKKGRKISF--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSI-SGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
LEA V + G+ ++ F I S + +I +G IPLPPYI R+ + R+
Sbjct: 110 --DEELEAVVKEYSGEGKRIIEFVIKSNKDFMEKIEEIGHIPLPPYIEREEKPEDRE--K 165
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A+ +G+VAAPTAGLHFT+ LL L S GI + +TLHVG GTF PVKVE+ +DH
Sbjct: 166 YQTVFARKEGAVAAPTAGLHFTTELLENLKSKGIIIKNITLHVGPGTFKPVKVENVEDHQ 225
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
M E ++ TA +N K G R+++VGTT R LE+A E G + TN+FI P
Sbjct: 226 MDYETYYVPEDTAIEINRAKEEGRRVIAVGTTVTRTLESAADESGKVKQGEDSTNLFIYP 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY+F+ +D L++NFHLP+STLLMLVSAF G E Y+ A+ YRFYSYGD +F
Sbjct: 286 GYKFKVIDALITNFHLPRSTLLMLVSAFAGKERILNAYKEAVRKGYRFYSYGDAMFIF 343
>gi|146295225|ref|YP_001178996.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor saccharolyticus DSM 8903]
gi|145408801|gb|ABP65805.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Caldicellulosiruptor saccharolyticus DSM 8903]
Length = 345
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 156/358 (43%), Positives = 213/358 (59%), Gaps = 24/358 (6%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+F +DLP IA +P+ PRDS+RLMV+HP+ I + D+ +LN D +V NN+
Sbjct: 8 DFHYDLPEELIAQKPIEPRDSSRLMVIHPDGR----IDHRIFRDIIEYLNEGDCLVLNNS 63
Query: 65 KVITAQLNGVRFCHINRREKE---ISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
KVI A+L I +RE I L R+S ++W V RP K +KG F
Sbjct: 64 KVIPARL-------IGQREDTGSFIEFLLVKRLSIDTWEVMTRPGKKARKGRRFVF---- 112
Query: 122 GQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A V+ + G ++ F G+ E + +G IPLPPYI K R Y
Sbjct: 113 GDGRLKAEVLHVNQDEGTRIVRFEYEGV-FEDILESLGEIPLPPYIKEKLENVER----Y 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+KI GS AAPTAGLHFT LLSR+ G++ +VTLHVG GTF PVKVE+ ++H M
Sbjct: 168 QTVYSKIPGSAAAPTAGLHFTEELLSRISKKGVQTLYVTLHVGLGTFKPVKVENIEEHKM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I A+ +N K G R+++VGTTS R+LE+A E G++ G+T+IFI PG
Sbjct: 228 HEEYYEISEDVAERINEAKRLGKRVIAVGTTSCRVLESAAVEKGLVKAQKGWTDIFIYPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y F+ +D L++NFHLP +TL+MLV AF G E Y+ A+ YRF+S+GD L+ +
Sbjct: 288 YEFKILDGLVTNFHLPDTTLMMLVCAFGGYERIMNAYKIAVEQRYRFFSFGDAMLILK 345
>gi|238019734|ref|ZP_04600160.1| hypothetical protein VEIDISOL_01609 [Veillonella dispar ATCC 17748]
gi|237863775|gb|EEP65065.1| hypothetical protein VEIDISOL_01609 [Veillonella dispar ATCC 17748]
Length = 341
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 154/356 (43%), Positives = 210/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD++LP IA PV PRD+ARL+ + ++ + +H DL L+ D +V
Sbjct: 1 MKVTDFDYELPEELIAQHPVEPRDTARLLTLD-KVTGEVAHKEHFY-DLLDELHEGDVLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L G R ++ L N W +P K G ++ F
Sbjct: 59 FNNTKVIPARLYGQR----QGSGGKVEVLLLTPCGENRWECLVKPGKKCPIGQVIEF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
RL TVIDK G ++ F+ G+ + I +G +PLPPYI K D Y
Sbjct: 112 --DDRLSGTVIDKTEFGGRIIEFTCDGV-FDDVIQEIGEMPLPPYIHEK----LEDKDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ + G+++ FVTLHVG GTF PV E +DH M
Sbjct: 165 QTVYAKEKGSAAAPTAGLHFTPELLEKIKAKGVELEFVTLHVGLGTFRPVSAETIEDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA +N+ K G RI++VGTTS+R LE+AT +DG++ SG+T IFI PG
Sbjct: 225 HSEFFVVSQDTADRINAAKRNGRRIIAVGTTSVRTLESATNDDGVLQGISGWTQIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STLLML+SA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YKFKMIDALVTNFHLPQSTLLMLISALAGREHCLAAYEEAVRERYRFFSFGDAMFI 340
>gi|282850102|ref|ZP_06259484.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Veillonella
parvula ATCC 17745]
gi|282580291|gb|EFB85692.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Veillonella
parvula ATCC 17745]
Length = 341
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 211/356 (59%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD++LP IA PV PRD+ARL+ + +S + H DL L+ D +V
Sbjct: 1 MKVTDFDYELPEELIAQHPVEPRDTARLLTLD-KVSGEVKHKGHFY-DLLEELHEGDVLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L G H ++ L N W +P K G ++ F
Sbjct: 59 FNNTKVIPARLYG----HRQGSGGKVEVLLLTPCGENRWECLVKPGKKCPIGQVIEF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
RL +IDK N G ++ F+ +G+ + I +G +PLPPYI K D Y
Sbjct: 112 --DDRLSGVIIDKTNFGGRIIQFTCNGV-FDDVIQEIGEMPLPPYIHEK----LEDKDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT +LL ++ + G+++ FVTLHVG GTF PV E +DH M
Sbjct: 165 QTVYAKEKGSAAAPTAGLHFTPDLLEKIKAKGVELEFVTLHVGLGTFRPVSAETIEDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA +N+ K +G RI++VGTTS+R LE+AT +DG++ SG+T IFI PG
Sbjct: 225 HSEFFVVPQDTANRINAAKQKGSRIIAVGTTSVRTLESATNDDGVLQGMSGWTQIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STLLML+SA E Y+ A+ YRF+S+GD +
Sbjct: 285 YKFKMIDALVTNFHLPQSTLLMLISALASREHCLAAYEEAVRERYRFFSFGDAMFI 340
>gi|297544495|ref|YP_003676797.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter mathranii subsp. mathranii str. A3]
gi|296842270|gb|ADH60786.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter mathranii subsp. mathranii str. A3]
Length = 341
Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 152/359 (42%), Positives = 209/359 (58%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M EF F+LP IA P+ R S+RLMV++ I + ++ +L + D +V
Sbjct: 1 MKRSEFYFELPKELIAQEPLEDRSSSRLMVLNKKTGE---IEHDIFKNITKYLKAGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREK---EISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
N+TKVI A+L I RRE +I L R+S N W +P + K G F
Sbjct: 58 LNDTKVIPARL-------IGRREDSGGKIEFVLIKRISSNEWETLVKPGRRAKIGSRFVF 110
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
G L A V+D G ++ F G+ E + +G +P+PPYI +K R
Sbjct: 111 ----GTGELIAEVLDATEAGGRIVRFYYEGV-FEEVLDKLGEMPVPPYIKKKLKNKDR-- 163
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YAK +GS AAPTAGLHFT LL ++ +G+K F+TLHVG GTF PVK E+ ++
Sbjct: 164 --YQTVYAKYEGSAAAPTAGLHFTKELLEKIKQMGVKTVFITLHVGLGTFRPVKEEEIEN 221
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH E + A +N + GGRI++VGTTS R LET E+G + SG+T+IFI
Sbjct: 222 HKMHEEFYIVTKEAANEINETRKSGGRIIAVGTTSTRTLETVADENGYVKEKSGWTDIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+F+A+D +++NFHLP+STL+M+VSAF G E + YQ AI H YRF+S+GD L+
Sbjct: 282 YPGYKFKAIDGMITNFHLPESTLIMMVSAFAGRENIMRAYQVAIEHKYRFFSFGDAMLI 340
>gi|289578214|ref|YP_003476841.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter italicus Ab9]
gi|289527927|gb|ADD02279.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter italicus Ab9]
Length = 341
Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 152/359 (42%), Positives = 209/359 (58%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M EF F+LP IA P+ R S+RLMV++ I + ++ +L + D +V
Sbjct: 1 MKRSEFYFELPKELIAQEPLEDRSSSRLMVLNKKTGE---IEHDIFKNITKYLKAGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREK---EISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
N+TKVI A+L I RRE +I L R+S N W +P + K G F
Sbjct: 58 LNDTKVIPARL-------IGRREDSGGKIEFVLIKRISSNEWETLVKPGRRAKIGSRFVF 110
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
G L A V+D G ++ F G+ E + +G +P+PPYI +K R
Sbjct: 111 ----GTGELIAEVLDTTEAGGRIVRFYYEGV-FEEVLDKLGEMPVPPYIKKKLKNKDR-- 163
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YAK +GS AAPTAGLHFT LL ++ +G+K F+TLHVG GTF PVK E+ ++
Sbjct: 164 --YQTVYAKYEGSAAAPTAGLHFTKELLEKIKQMGVKTVFITLHVGLGTFRPVKEEEIEN 221
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH E + A +N + GGRI++VGTTS R LET E+G + SG+T+IFI
Sbjct: 222 HKMHEEFYIVTKEAANEINETRKSGGRIIAVGTTSTRTLETVADENGYVKEKSGWTDIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+F+A+D +++NFHLP+STL+M+VSAF G E + YQ AI H YRF+S+GD L+
Sbjct: 282 YPGYKFKAIDGMITNFHLPESTLIMMVSAFAGRENIMRAYQVAIEHKYRFFSFGDAMLI 340
>gi|55820620|ref|YP_139062.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus thermophilus LMG 18311]
gi|81560864|sp|Q5M5E8|QUEA_STRT2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|55736605|gb|AAV60247.1| S-adenosylmethionine-tRNA ribosyltransferase-isomerase
[Streptococcus thermophilus LMG 18311]
Length = 347
Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 163/355 (45%), Positives = 221/355 (62%), Gaps = 21/355 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVIS--DHLVSDLPAFLNSNDA 58
M +FDF+LP IA P+ RD+++L+V+ P ++ + + DH++ L N DA
Sbjct: 1 MNTNDFDFELPEELIAQTPLEQRDASKLLVIDP-VTREMTDTHFDHIIDQL----NPGDA 55
Query: 59 IVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
+V NNT+V+ A+L G + + L + W V A+P+K +K G + F
Sbjct: 56 LVMNNTRVLPARLYGEK----TDTHGHVEFLLLKNTQGDQWEVLAKPAKRLKVGAKVSF- 110
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
G RL ATV ++ + G ++ FS +GI LE SL G +PLPPYI K ++ RD
Sbjct: 111 ---GDGRLTATVTEELDHGGRIVEFSYNGIFLEVLESL-GEMPLPPYIHEK--LEDRDR- 163
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ D+H
Sbjct: 164 -YQTVYAKENGSAAAPTAGLHFTPELLQKIEAKGVKLVYLTLHVGLGTFRPVSVDNVDEH 222
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFI 297
MHSE + A LNSVK+ GGRIV+VGTTS+R LET + DG + SG+TNIFI
Sbjct: 223 EMHSEFYTLSQEAADTLNSVKAAGGRIVAVGTTSIRTLETIGNKYDGQLQADSGWTNIFI 282
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY+F VD +NFHLPKSTL+MLVSAF G E + Y+HAI YRF+S+GD
Sbjct: 283 KPGYQFTVVDAFSTNFHLPKSTLVMLVSAFAGREFVLEAYKHAIQERYRFFSFGD 337
>gi|322517220|ref|ZP_08070102.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus vestibularis ATCC 49124]
gi|322124207|gb|EFX95731.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus vestibularis ATCC 49124]
Length = 347
Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 163/362 (45%), Positives = 222/362 (61%), Gaps = 21/362 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVIS--DHLVSDLPAFLNSNDA 58
M +FDF+LP IA P+ RD+++L+V+ P ++ + + DH++ L N DA
Sbjct: 1 MNTNDFDFELPEELIAQTPLEQRDASKLLVIDP-VTKEMTDTHFDHIIDQL----NPGDA 55
Query: 59 IVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
+V NNT+V+ A+L G + N + L + W V A+P+K +K G + F
Sbjct: 56 LVMNNTRVLPARLYGEK----NDTHGHVEFLLLKNTQGDQWEVLAKPAKRLKVGAKVSF- 110
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
G RL ATV ++ + G ++ FS GI LE SL G +PLPPYI K ++ RD
Sbjct: 111 ---GDGRLTATVTEELDHGGRIVEFSYDGIFLEVLESL-GEMPLPPYIHEK--LEDRDR- 163
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YAK GS AAPTAGLHFT LL + + G+K+ ++TLHVG GTF PV V++ D+H
Sbjct: 164 -YQTVYAKENGSAAAPTAGLHFTPELLQNIEAKGVKLVYLTLHVGLGTFRPVSVDNVDEH 222
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFI 297
MHSE + A LNSVK+ GGRIV+VGTTS+R LET + +G + SG+TNIFI
Sbjct: 223 EMHSEFYTLSQEAADTLNSVKATGGRIVAVGTTSIRTLETIGNKYNGRLQADSGWTNIFI 282
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+F VD +NFHLPKSTL+MLVSAF G E Y+HA+ YRF+S+GD +
Sbjct: 283 KPGYQFTVVDAFSTNFHLPKSTLVMLVSAFAGREFVLDAYKHAVQERYRFFSFGDAMFVT 342
Query: 358 QK 359
Q+
Sbjct: 343 QR 344
>gi|322372469|ref|ZP_08047005.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sp. C150]
gi|321277511|gb|EFX54580.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sp. C150]
Length = 347
Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 164/355 (46%), Positives = 219/355 (61%), Gaps = 21/355 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVIS--DHLVSDLPAFLNSNDA 58
M +FDF+LP IA P+ RD+++L+V+ P ++ + + DH++ L N DA
Sbjct: 1 MNTNDFDFELPEELIAQTPLKQRDASKLLVIDP-VTKEMTDTHFDHIIDQL----NPGDA 55
Query: 59 IVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
+V NNT+V+ A+L G + + L + W V A+P+K +K G + F
Sbjct: 56 LVMNNTRVLPARLYGEK----PDTHGHVEFLLLKNTQGDQWEVLAKPAKRLKVGAKVSF- 110
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
G RL ATV ++ + G ++ FS GI LE SL G +PLPPYI K ++ RD
Sbjct: 111 ---GDGRLTATVTEELDHGGRIVEFSYDGIFLEVLESL-GEMPLPPYIHEK--LEDRDR- 163
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YAK GS AAPTAGLHFT LL ++ S G+K+ ++TLHVG GTF PV VE+ D+H
Sbjct: 164 -YQTVYAKENGSAAAPTAGLHFTPELLQKIESKGVKLVYLTLHVGLGTFRPVSVENVDEH 222
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFI 297
MHSE + A LNSVK+ GGRIV+VGTTS+R LET + DG + SG+TNIFI
Sbjct: 223 EMHSEFYTLSQDAADTLNSVKAAGGRIVAVGTTSIRTLETIGNKYDGQLQADSGWTNIFI 282
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY+F VD +NFHLPKSTL+MLVSAF G E Y+HA+ YRF+S+GD
Sbjct: 283 KPGYQFTVVDAFSTNFHLPKSTLVMLVSAFAGREFVLDAYKHAVQERYRFFSFGD 337
>gi|325697145|gb|EGD39032.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK160]
Length = 342
Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 160/353 (45%), Positives = 212/353 (60%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV V SD + L DA+V
Sbjct: 1 MNTADFDFDLPEELIAQTPLEKRDASRLLVVDKETG---VFSDQHFDQIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGIK----PETGGHVELLLLKNTQGDDWEVLAKPAKRLRVGAQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+D+ + G ++ F+ GI LE SL G +PLPPYI K R Y
Sbjct: 111 -GDGRLTATVVDELDHGGRIVRFAYEGIFLEVLESL-GEMPLPPYIHEKLADRER----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V+ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLEQIAAKGVKLVYLTLHVGLGTFRPVSVDSLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ GGR+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRQVKANGGRVIAVGTTSIRTLETIGSKFQGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY ++ VD +NFHLPKSTL+MLVSAF G T + Y+HAI+ YRF+S+GD
Sbjct: 285 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRSLTLEAYEHAIAERYRFFSFGD 337
>gi|328957017|ref|YP_004374403.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Carnobacterium sp. 17-4]
gi|328673341|gb|AEB29387.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Carnobacterium sp. 17-4]
Length = 345
Score = 283 bits (723), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 157/353 (44%), Positives = 213/353 (60%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ K+FDFDLP IA P+ R S++L++++ + D +D+ LN DA+V
Sbjct: 4 LTTKDFDFDLPEELIAQTPLENRSSSKLLILNKETGE---VDDKHFTDILEELNEGDALV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+GV+ + L + W +P+K G ++ F
Sbjct: 61 MNDTRVLPARLHGVK----PETGAHLEILLLKNTEKDQWETLVKPAKKATVGTVISF--- 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV ++ N G ++ FS GI LE SL G +PLPPYI + R Y
Sbjct: 114 -GDGRLTATVTEELNHGGRIIDFSYDGIFLEVLESL-GEMPLPPYIKERLEDSER----Y 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ S G+K+ F+TLHVG GTF PV V+ +DH M
Sbjct: 168 QTVYAKENGSAAAPTAGLHFTEELLEKIKSKGVKLIFLTLHVGLGTFRPVSVDSIEDHEM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + +A L +V++ GGRIV+VGTTS+R LET T+ +G I SG+T+IFI+P
Sbjct: 228 HSEFYRLTEESATELTAVRNNGGRIVAVGTTSIRTLETIGTKFNGEIKADSGWTDIFISP 287
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+ VD +NFHLPKSTL+MLVSAF G E YQHA+ YRF+S+GD
Sbjct: 288 GYTFKVVDAFSTNFHLPKSTLVMLVSAFAGREHVLAAYQHAVDEKYRFFSFGD 340
>gi|327458690|gb|EGF05038.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK1057]
Length = 342
Score = 283 bits (723), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 160/353 (45%), Positives = 211/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV SD + L DA+V
Sbjct: 1 MNTADFDFDLPEELIAQTPLEKRDASRLLVVDKETGA---FSDQHFDQIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGIK----PETGGHVELLLLKNTQGDDWEVLAKPAKRLRVGAQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATVI++ G ++ FS GI LE SL G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVIEELEHGGRIVRFSYEGIFLEVLESL-GEMPLPPYIHEKLA----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V+ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLEQIAAKGVKLVYLTLHVGLGTFRPVSVDSLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK++GGR+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRQVKAKGGRVIAVGTTSIRTLETIGSKFQGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY ++ VD +NFHLPKSTL+MLVSAF G T + Y+HAI+ YRF+S+GD
Sbjct: 285 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRSLTLEAYEHAIAERYRFFSFGD 337
>gi|322412116|gb|EFY03024.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus dysgalactiae subsp. dysgalactiae ATCC
27957]
Length = 342
Score = 283 bits (723), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 160/354 (45%), Positives = 214/354 (60%), Gaps = 19/354 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
M +FDFDLP IA P+ RDS++L+++ H + DH++ L N DA+
Sbjct: 1 MNTNDFDFDLPEELIAQTPLEKRDSSKLLIIDHEQKTMIDSHFDHIIDQL----NPGDAL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V NNT+V+ A+L G + + L + W V A+P+K +K G + F
Sbjct: 57 VMNNTRVLPARLYGEKL----DTHGHVELLLLKNTHGDQWEVLAKPAKRLKVGSQVSF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G RL AT++++ G ++ F+ GI LE SL G +PLPPYI K R
Sbjct: 111 --GDGRLTATIVEELEHGGRIVEFNYEGIFLEVLESL-GEMPLPPYIHEKLDDAER---- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT++LLS++ + G+ + ++TLHVG GTF PV VE+ DDH
Sbjct: 164 YQTVYAKENGSAAAPTAGLHFTTDLLSKIEAKGVHLVYLTLHVGLGTFRPVSVENLDDHD 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MHSE + AQ L VK GGRIV+VGTTS+R LET ++ G I SG+TNIFI
Sbjct: 224 MHSEFYSLSEEAAQTLRDVKQAGGRIVAVGTTSIRTLETIGSKFQGDIQADSGWTNIFIK 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY+F+ VD +NFHLPKSTL+MLVSAF G + Y+HA+ YRF+S+GD
Sbjct: 284 PGYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLDAYKHAVDEKYRFFSFGD 337
>gi|167748863|ref|ZP_02420990.1| hypothetical protein ANACAC_03637 [Anaerostipes caccae DSM 14662]
gi|167651833|gb|EDR95962.1| hypothetical protein ANACAC_03637 [Anaerostipes caccae DSM 14662]
Length = 357
Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 157/361 (43%), Positives = 204/361 (56%), Gaps = 26/361 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F FDLP IA P+ R S+RL+V+ I ++ +L D +V
Sbjct: 17 MKTSDFTFDLPEELIAQDPLTDRSSSRLLVLDKETGE---IRHEGFRNIAGYLKRGDCLV 73
Query: 61 FNNTKVITAQLNGVRFCHINRREKE-----ISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
N+TKVI A+L G EKE I L R N+W +P + K G +
Sbjct: 74 LNDTKVIPARLIG---------EKEGTGAKIEVLLLKRKQDNTWETLVKPGRKAKPGTRI 124
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
F GQ +L V D + G L+ F GI E + +G +PLPPYI + +
Sbjct: 125 SF----GQGKLVGEVTDIVDEGNRLVKFEFDGI-FEEVLDELGQMPLPPYITHQ----LK 175
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT YAK +GS AAPTAGLHFT LL + GI++ +VTLHVG GTF PVKVED
Sbjct: 176 DKNRYQTVYAKHEGSAAAPTAGLHFTKELLKEIEEKGIRLAYVTLHVGLGTFRPVKVEDV 235
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+H MHSE +D A+ +N + GGRI+SVGTTS R LE+A E+G I P SG+T I
Sbjct: 236 TEHHMHSEFYVVDEEAAEKINKTRKEGGRIISVGTTSTRTLESAADENGFIEPKSGWTEI 295
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGY+F+ +D L++NFHLP+STLLMLVSA G E K Y A+ YRF+S+GD
Sbjct: 296 FIYPGYKFKVIDGLITNFHLPESTLLMLVSALAGKEHILKAYDEAVKERYRFFSFGDAMF 355
Query: 356 L 356
+
Sbjct: 356 I 356
>gi|317470297|ref|ZP_07929690.1| tRNA ribosyltransferase-isomerase [Anaerostipes sp. 3_2_56FAA]
gi|316902205|gb|EFV24126.1| tRNA ribosyltransferase-isomerase [Anaerostipes sp. 3_2_56FAA]
Length = 341
Score = 282 bits (722), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 157/357 (43%), Positives = 203/357 (56%), Gaps = 26/357 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F FDLP IA P+ R S+RL+V+ I ++ +L D +V
Sbjct: 1 MKTSDFTFDLPEELIAQDPLTDRSSSRLLVLDKETGE---IRHEGFRNIAGYLKRGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKE-----ISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
N+TKVI A+L G EKE I L R N+W +P + K G +
Sbjct: 58 LNDTKVIPARLIG---------EKEGTGAKIEVLLLKRKQDNTWETLVKPGRKAKPGTRI 108
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
F GQ +L V D + G L+ F GI E + +G +PLPPYI + +
Sbjct: 109 SF----GQGKLVGEVTDIVDEGNRLVKFEFDGI-FEEVLDELGQMPLPPYITHQ----LK 159
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT YAK +GS AAPTAGLHFT LL + GI++ +VTLHVG GTF PVKVED
Sbjct: 160 DKNRYQTVYAKHEGSAAAPTAGLHFTKELLKEIEEKGIRLAYVTLHVGLGTFRPVKVEDV 219
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+H MHSE +D A+ +N + GGRI+SVGTTS R LE+A E+G I P SG+T I
Sbjct: 220 TEHHMHSEFYVVDEEAAEKINKTRKEGGRIISVGTTSTRTLESAADENGFIEPKSGWTEI 279
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
FI PGY+F+ +D L++NFHLP+STLLMLVSA G E K Y A+ YRF+S+GD
Sbjct: 280 FIYPGYKFKVIDGLITNFHLPESTLLMLVSALAGKEHILKAYDEAVKERYRFFSFGD 336
>gi|312863897|ref|ZP_07724135.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus vestibularis F0396]
gi|311101433|gb|EFQ59638.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus vestibularis F0396]
Length = 347
Score = 282 bits (722), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 162/355 (45%), Positives = 220/355 (61%), Gaps = 21/355 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVIS--DHLVSDLPAFLNSNDA 58
M +FDF+LP IA P+ RD+++L+V+ P ++ + + DH++ L N DA
Sbjct: 1 MNTNDFDFELPEELIAQTPLEQRDASKLLVIDP-VTKEMTDTHFDHIIDQL----NPGDA 55
Query: 59 IVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
+V NNT+V+ A+L G + N + L + W V A+P+K +K G + F
Sbjct: 56 LVMNNTRVLPARLYGEK----NDTHGHVEFLLLKNTQGDQWEVLAKPAKRLKVGAKVSF- 110
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
G RL ATV ++ + G ++ FS +GI LE SL G +PLPPYI K ++ RD
Sbjct: 111 ---GDGRLTATVTEELDHGGRIVEFSYNGIFLEVLESL-GEMPLPPYIHEK--LEDRDR- 163
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YAK GS AAPTAGLHFT LL + + G+K+ ++TLHVG GTF PV V++ D+H
Sbjct: 164 -YQTVYAKENGSAAAPTAGLHFTPELLQNIEAKGVKLVYLTLHVGLGTFRPVSVDNVDEH 222
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFI 297
MHSE + A LNSVK+ GGRIV+VGTTS+R LET + +G + SG+TNIFI
Sbjct: 223 EMHSEFYTLSQEAADTLNSVKATGGRIVAVGTTSIRTLETIGNKYNGRLQAESGWTNIFI 282
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY+F VD +NFHLPKSTL+MLVSAF G E Y+HA+ YRF+S+GD
Sbjct: 283 KPGYQFTVVDAFSTNFHLPKSTLVMLVSAFAGREFVLDAYKHAVQERYRFFSFGD 337
>gi|320546395|ref|ZP_08040710.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus equinus ATCC 9812]
gi|320448780|gb|EFW89508.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus equinus ATCC 9812]
Length = 342
Score = 282 bits (722), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 163/355 (45%), Positives = 220/355 (61%), Gaps = 21/355 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVIS--DHLVSDLPAFLNSNDA 58
M +FDF+LP IA P+ RDS++L+V+ N + +V + DH++ +L N DA
Sbjct: 1 MNTNDFDFNLPEELIAQTPLEKRDSSKLLVIDRN-THEMVDAHFDHILDEL----NPGDA 55
Query: 59 IVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
+V NNT+V+ A+L G + + L + W V A+P+K ++ G + F
Sbjct: 56 LVMNNTRVLPARLYGEK----PETHGHVELLLLKNTEGDKWEVLAKPAKRLRVGTKVSF- 110
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
G RL ATV+++ + G ++ F GI LE SL G +PLPPYI K +D D
Sbjct: 111 ---GDGRLTATVVEELDNGGRIVEFDYGGIFLEVLESL-GEMPLPPYIHEK--LDDPDR- 163
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YAK GS AAPTAGLHFT LL ++ + G+K+ +VTLHVG GTF PV V++ ++H
Sbjct: 164 -YQTVYAKENGSAAAPTAGLHFTKELLEKIEAKGVKLVYVTLHVGLGTFRPVSVDNVEEH 222
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFI 297
MHSE + AQ L VK+ GGRIV+VGTTS+R LET ++ +G I SG+TNIFI
Sbjct: 223 EMHSEFYRLSEEAAQTLRDVKATGGRIVAVGTTSIRTLETIGSKFNGEIKADSGWTNIFI 282
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY F+ VD +NFHLPKSTL+MLVSAF G E + YQHAI YRF+S+GD
Sbjct: 283 KPGYEFKVVDAFSTNFHLPKSTLVMLVSAFAGREFVLEAYQHAIDERYRFFSFGD 337
>gi|182418567|ref|ZP_02949847.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
butyricum 5521]
gi|237667777|ref|ZP_04527761.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
butyricum E4 str. BoNT E BL5262]
gi|182377570|gb|EDT75121.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
butyricum 5521]
gi|237656125|gb|EEP53681.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
butyricum E4 str. BoNT E BL5262]
Length = 341
Score = 282 bits (721), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 151/356 (42%), Positives = 209/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RD++RLMV+ I + D+ +LN+ D +V
Sbjct: 1 MNVKDFDFYLPEELIAQHPLEKRDTSRLMVLDKKTGE---IEHKVFHDIVDYLNAGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + +I L RV + W A+P K + G F
Sbjct: 58 LNNTRVMPARLIGEK----EETGGKIEFLLLKRVEKDRWECLAKPGKSARVGRKFTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+A V++ G ++ F GI E + +G +PLPPYI + D Y
Sbjct: 111 -GEGKLKAEVVEVKENGNRIVEFHYEGI-FEEVLDSLGEMPLPPYIHER----LEDRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT+ LL ++ GI V ++TLHVG GTF PVKVE+ ++H M
Sbjct: 165 QTVYSKENGSAAAPTAGLHFTNQLLEQIKEKGINVVYLTLHVGLGTFRPVKVENLEEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + +A +N K GGR++SVGTTS R LET E+G++ SG+TNIFI PG
Sbjct: 225 HSEFYMLSKESADIINETKRNGGRVISVGTTSTRTLETIGDENGLVKEQSGWTNIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STL+MLVS G E Y+ A+ YRF+S+GD +
Sbjct: 285 YKFKVVDNLITNFHLPESTLIMLVSTLAGKEHVMNAYKTAVEEKYRFFSFGDAMFI 340
>gi|125973476|ref|YP_001037386.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
thermocellum ATCC 27405]
gi|256005374|ref|ZP_05430339.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Clostridium
thermocellum DSM 2360]
gi|281417678|ref|ZP_06248698.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Clostridium
thermocellum JW20]
gi|166216717|sp|A3DE14|QUEA_CLOTH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|125713701|gb|ABN52193.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Clostridium thermocellum ATCC 27405]
gi|255990693|gb|EEU00810.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Clostridium
thermocellum DSM 2360]
gi|281409080|gb|EFB39338.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Clostridium
thermocellum JW20]
gi|316940286|gb|ADU74320.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Clostridium
thermocellum DSM 1313]
Length = 341
Score = 282 bits (721), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 159/361 (44%), Positives = 212/361 (58%), Gaps = 26/361 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F +DLP IA PV RD +RLMV+ IS D+ ++N D +V
Sbjct: 1 MKVSDFYYDLPQELIAQEPVEKRDMSRLMVLDKETGK---ISHKRFKDIVEYINKGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKE-----ISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
N+T+VI A+L G EKE I L R++ + W V +P K K G
Sbjct: 58 LNDTRVIPARLLG---------EKEGTGGKIEFVLLKRINGDVWEVILKPGKKAKPGARF 108
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
F G L+A VI+ G L+ F GI E + +G +PLPPYI +K +D
Sbjct: 109 VF----GNGELKAEVIEIVEEGNRLVRFEYDGI-FEEILDRIGIVPLPPYITKK--LD-- 159
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y++ +GS AAPTAGLHFT LL L G+K+ +VTLHVG GTF PVKVE+
Sbjct: 160 DAERYQTVYSRYKGSAAAPTAGLHFTLELLEELAGRGVKIAYVTLHVGLGTFRPVKVENL 219
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
++H MHSE I +NS K GG+I++VGTTS R+LET E+GI+ P SG+T+I
Sbjct: 220 EEHKMHSEFYRIKEEDCDKINSTKQNGGKIIAVGTTSCRVLETVGDENGIVRPQSGWTDI 279
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGY+F+ VD L++NFHLP+STL+MLVSA G E+ + Y A+ YRF+S+GD
Sbjct: 280 FIYPGYKFKVVDSLITNFHLPESTLIMLVSALAGREKILEAYNIAVKERYRFFSFGDAMF 339
Query: 356 L 356
+
Sbjct: 340 I 340
>gi|125717594|ref|YP_001034727.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK36]
gi|166218750|sp|A3CLX2|QUEA_STRSV RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|125497511|gb|ABN44177.1| S-adenosylmethio nine:tRNA-ribosyltransferase-isomerase (queuine
synthetase), putative [Streptococcus sanguinis SK36]
Length = 342
Score = 282 bits (721), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 160/353 (45%), Positives = 210/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV SD + L DA+V
Sbjct: 1 MNTADFDFDLPEELIAQTPLEKRDASRLLVVDKETGA---FSDQHFDQIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGIK----PETGGHVELLLLKNTQGDDWEVLAKPAKRLRVGAQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATVI++ G ++ FS GI LE SL G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVIEELEHGGRIVRFSYEGIFLEVLESL-GEMPLPPYIHEKLA----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V+ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLEQIAAKGVKLVYLTLHVGLGTFRPVSVDSLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ GGR+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRQVKANGGRVIAVGTTSIRTLETIGSKFQGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY ++ VD +NFHLPKSTL+MLVSAF G T + Y+HAI+ YRF+S+GD
Sbjct: 285 GYNWKVVDAFSTNFHLPKSTLVMLVSAFAGRSLTLEAYEHAIAERYRFFSFGD 337
>gi|313637715|gb|EFS03084.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
seeligeri FSL S4-171]
Length = 342
Score = 282 bits (721), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 153/353 (43%), Positives = 216/353 (61%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++L+ DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKATGE---IKDQHFTDILSYLHEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G + + I L + N+W +P+K I++G + F
Sbjct: 58 LNDTRVLPARLHGTK----DETGAHIEVLLLKQKEGNAWETLVKPAKRIRQGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+AT +++ G +L FS GI E + +G +PLPPYI + R Y
Sbjct: 111 -GDGALKATCLEELEHGGRILEFSYEGIFYE-VLEQLGEMPLPPYIKEQLADQDR----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEDLLAKIKAKGVEIIFVTLHVGLGTFRPVDVEDTANHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + A+ +N VK GG++V+VGTTS+R LET A+ +G + SG+T IFI+P
Sbjct: 225 HSEFYRLTEEAAERINKVKETGGKVVAVGTTSIRTLETIASRHEGELVAESGWTEIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+AVD L++NFHLPKSTL+MLV + Y HA+ YRF+S+GD
Sbjct: 285 GYTFQAVDALITNFHLPKSTLIMLVXXLSDRNKILTAYNHAVEQQYRFFSFGD 337
>gi|325690109|gb|EGD32113.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK115]
Length = 343
Score = 282 bits (721), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 159/353 (45%), Positives = 210/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV SD + L DA+V
Sbjct: 2 MNTADFDFDLPEELIAQTPLEKRDASRLLVVDKETGA---FSDQHFDQIIDQLQPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + W V A+P+K ++ G + F
Sbjct: 59 MNNTRVLPARLYGIK----PETGGHVELLLLKNTQGDDWEVLAKPAKRLRVGAQISF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+++ + G ++ F GI LE SL G +PLPPYI K D Y
Sbjct: 112 -GDGRLTATVVEELDHGGRIVRFGYEGIFLEVLESL-GEMPLPPYIHEKLA----DRERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V+ DDH M
Sbjct: 166 QTVYAKENGSAAAPTAGLHFTEELLEQIAAKGVKLVYLTLHVGLGTFRPVSVDSLDDHEM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ GGR+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 226 HSEFYSLSEEAAQTLRQVKANGGRVIAVGTTSIRTLETIGSKFQGQIQADSGWTNIFIKP 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY ++ VD +NFHLPKSTL+MLVSAF G T K Y+HAI+ YRF+S+GD
Sbjct: 286 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRSLTLKAYEHAIAERYRFFSFGD 338
>gi|116627427|ref|YP_820046.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus thermophilus LMD-9]
gi|122267975|sp|Q03LS2|QUEA_STRTD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|116100704|gb|ABJ65850.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Streptococcus thermophilus LMD-9]
gi|312277945|gb|ADQ62602.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (Queuine
synthetase) [Streptococcus thermophilus ND03]
Length = 347
Score = 281 bits (720), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 162/354 (45%), Positives = 215/354 (60%), Gaps = 19/354 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHP-NLSCPLVISDHLVSDLPAFLNSNDAI 59
M +FDF+LP IA P+ RD+++L+V+ P DH++ L N DA+
Sbjct: 1 MNTNDFDFELPEELIAQTPLEQRDASKLLVIDPVTREMTDTHFDHIIDQL----NPGDAL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V NNT+V+ A+L G + + L + W V A+P+K +K G + F
Sbjct: 57 VMNNTRVLPARLYGEK----TDTHGHVEFLLLKNTQGDQWEVLAKPAKRLKVGAKVSF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G RL ATV + + G ++ FS GI LE SL G +PLPPYI K ++ RD
Sbjct: 111 --GDGRLTATVTKELDHGGRIVEFSYDGIFLEVLESL-GEMPLPPYIHEK--LEDRDR-- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ D+H
Sbjct: 164 YQTVYAKENGSAAAPTAGLHFTPELLQKIEAKGVKLVYLTLHVGLGTFRPVSVDNVDEHE 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MHSE + A LNSVK+ GGRIV+VGTTS+R LET + DG + SG+TNIFI
Sbjct: 224 MHSEFYTLSQEAADTLNSVKAAGGRIVAVGTTSIRTLETIGNKYDGQLQADSGWTNIFIK 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY+F VD +NFHLPKSTL+MLVSAF G E + Y+HA+ YRF+S+GD
Sbjct: 284 PGYQFTVVDAFSTNFHLPKSTLVMLVSAFAGREFVLEAYKHAVQERYRFFSFGD 337
>gi|24379107|ref|NP_721062.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus mutans UA159]
gi|46577053|sp|Q8DV72|QUEA_STRMU RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|24377009|gb|AAN58368.1|AE014907_5 putative S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Streptococcus mutans UA159]
Length = 342
Score = 281 bits (720), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 160/354 (45%), Positives = 221/354 (62%), Gaps = 19/354 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
M +FDF+LP + IA P+ RDS++L+VV H + DH++ +L NS DA+
Sbjct: 1 MNTSDFDFNLPEALIAQTPLKKRDSSKLLVVDHQKKTMKDTHFDHIIDEL----NSGDAL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V N+T+V+ A+L+G + + L + + W V A+P+K +K G + F
Sbjct: 57 VMNDTRVLPARLHGEKTV----THGHVELLLLKNIQGDQWEVLAKPAKRLKVGSHISF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G RL+A + ++ + G ++ FS GI LE SL G +PLPPYI K ++ RD
Sbjct: 111 --GDGRLKAIIKEELDHGGRIVEFSYEGIFLEVLESL-GEMPLPPYIHEK--LEDRDR-- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT LLS++ + G+K+ ++TLHVG GTF PV V++ ++H
Sbjct: 164 YQTVYAKENGSAAAPTAGLHFTEELLSKIEAKGVKLVYLTLHVGLGTFRPVSVDNVEEHQ 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MHSE + AQ L VK+ GGRIV+VGTTS+R LET + G I SG+TNIFI
Sbjct: 224 MHSEFYSLSPEAAQTLKDVKANGGRIVAVGTTSIRTLETIGNKFAGQIEADSGWTNIFIK 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY+F+ VD +NFHLPKSTL+MLVSAF G + Y+HA+ YRF+S+GD
Sbjct: 284 PGYQFKIVDAFSTNFHLPKSTLVMLVSAFAGRDFILDAYKHAVDKHYRFFSFGD 337
>gi|94994643|ref|YP_602741.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS10750]
gi|166218748|sp|Q1J5Y6|QUEA_STRPF RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|94548151|gb|ABF38197.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS10750]
Length = 342
Score = 281 bits (720), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 158/354 (44%), Positives = 217/354 (61%), Gaps = 19/354 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
M +FDF+LP IA P+ RDS++L+++ H + DH++ L N DA+
Sbjct: 1 MNTNDFDFELPEELIAQTPLEKRDSSKLLIIDHRQKTMVDSHFDHIIDQL----NPGDAL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V NNT+V+ A+L G + + L + W V A+P+K +K G ++F
Sbjct: 57 VMNNTRVLPARLYGEK----PDTHGHVELLLLKNTQGDQWEVLAKPAKRLKVGSQVNF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G RL+AT+ID+ G ++ FS GI LE SL G +PLPPYI K +D
Sbjct: 111 --GDGRLKATIIDELEHGGRIVEFSYDGIFLEVLESL-GEMPLPPYIHEK----LKDAER 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT++LL ++ + G+ + ++TLHVG GTF PV V++ D+H
Sbjct: 164 YQTVYAKENGSAAAPTAGLHFTTDLLKKIEAKGVHLVYLTLHVGLGTFRPVSVDNLDEHD 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MHSE + AQ L VK GGR+V+VGTTS+R LET ++ G I SG+TNIFI
Sbjct: 224 MHSEFYSLSEEAAQTLRDVKQAGGRVVAVGTTSIRTLETIGSKFQGDIQADSGWTNIFIK 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY+F+ VD +NFHLPKSTL+MLVSAF G + + Y+HA+ YRF+S+GD
Sbjct: 284 PGYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYRHAVDEKYRFFSFGD 337
>gi|260887834|ref|ZP_05899097.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Selenomonas
sputigena ATCC 35185]
gi|330838599|ref|YP_004413179.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Selenomonas
sputigena ATCC 35185]
gi|260862440|gb|EEX76940.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Selenomonas
sputigena ATCC 35185]
gi|329746363|gb|AEB99719.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Selenomonas
sputigena ATCC 35185]
Length = 343
Score = 281 bits (720), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 153/362 (42%), Positives = 215/362 (59%), Gaps = 23/362 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M++K+FD++LP RIA +P+ PR+++RLMV+ P I DL FL DA++
Sbjct: 1 MLLKDFDYELPEERIAQKPIEPRNASRLMVLDP---VAKTIEHRHFYDLGEFLAPGDALI 57
Query: 61 FNNTKVITAQLNGVRFCHINRRE---KEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
N+T+V+ A+L G RRE I L R+ +SW RP K + G ++ F
Sbjct: 58 LNDTRVLPARLYG-------RREPTGAHIEVFLLRRLDKDSWETLVRPGKKAQVGQVIRF 110
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+ L A V+ + G ++ F G+ E + +G PLPPYI + D
Sbjct: 111 SDE-----LCAEVMAHTDFGGRIVKFRYEGV-FEEILDRLGETPLPPYIHER----LEDK 160
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT Y + +GS AAPTAGLHFT L+ L + G+ + FVTLHVG GTF PV VE ++
Sbjct: 161 ERYQTVYCREEGSAAAPTAGLHFTREQLAELKAQGVHIGFVTLHVGLGTFRPVNVEKIEE 220
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MHSE + TA+ + K+ GGR+++VGTTS+R LE+A G+I+ SG+T+IFI
Sbjct: 221 HKMHSEYYQLPEETAELIRRTKAAGGRVIAVGTTSIRTLESAAEAQGVISAKSGWTDIFI 280
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGYRF+ VD L++NFHLPKSTLLML+SAF G E Y+ A+ YRF+S+GD L
Sbjct: 281 YPGYRFKIVDALVTNFHLPKSTLLMLISAFAGREFVLHAYEEAVREKYRFFSFGDAMFLR 340
Query: 358 QK 359
++
Sbjct: 341 KR 342
>gi|294501379|ref|YP_003565079.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
megaterium QM B1551]
gi|295706726|ref|YP_003599801.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
megaterium DSM 319]
gi|294351316|gb|ADE71645.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
megaterium QM B1551]
gi|294804385|gb|ADF41451.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
megaterium DSM 319]
Length = 342
Score = 281 bits (720), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 214/358 (59%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF LP IA P+ RD++RLMV++ + H+ DL ++ D +V
Sbjct: 1 MKVDLFDFHLPEELIAQTPLEQRDASRLMVLNKETGS---VKHHMFHDLLDYVQEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + I L + ++W +P+K +K+G ++ F
Sbjct: 58 LNDTRVLPARLFGTK----EDTGANIEVLLLKQTQGDTWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A + + G LL F+ GI E + +G +PLPPYI K +D D Y
Sbjct: 111 -GDGRLTAVCKETSDQGGRLLEFNYEGIFYEV-LEQLGEMPLPPYI--KERLD--DQERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ QGS AAPTAGLHFT +L +L G+ + F+TLHVG GTF PV V+D ++H M
Sbjct: 165 QTVFAREQGSAAAPTAGLHFTEEMLEQLKEKGVHIAFLTLHVGLGTFRPVSVDDLEEHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + TA LNSV+ +GGRI+SVGTTS R LET TE +G SG+TNIFI P
Sbjct: 225 HSEFYQVSEGTAALLNSVREKGGRIISVGTTSTRTLETIATEHNGKFVASSGWTNIFIFP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY F+A+D +++NFHLPKSTL+MLVSA G E Y+ A++ YRF+S+GD L+
Sbjct: 285 GYEFKAIDGMITNFHLPKSTLIMLVSALAGRENVISAYEQAVAEKYRFFSFGDAMLIL 342
>gi|327473324|gb|EGF18744.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK408]
Length = 342
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 158/354 (44%), Positives = 212/354 (59%), Gaps = 17/354 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV SD + L DA+V
Sbjct: 1 MNTADFDFDLPEELIAQTPLEKRDASRLLVVDKETGA---FSDQHFDQIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGIK----PETGGHVELLLLKNIQGDDWEVLAKPAKRLRVGAQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+++ + G ++ F GI LE SL G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVVEELDHGGRIVRFGYEGIFLEVLESL-GEMPLPPYIHEKLA----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V+ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLEQISAKGVKLVYLTLHVGLGTFRPVSVDSLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK++GGR+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQILRQVKAKGGRVIAVGTTSIRTLETIGSKFQGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
GY ++ VD +NFHLPKSTL+MLVSAF G T + Y+HAI+ YRF+S+GD
Sbjct: 285 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRSLTLEAYEHAIAERYRFFSFGDA 338
>gi|55822510|ref|YP_140951.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus thermophilus CNRZ1066]
gi|81559694|sp|Q5M0W1|QUEA_STRT1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|55738495|gb|AAV62136.1| S-adenosylmethionine-tRNA ribosyltransferase-isomerase
[Streptococcus thermophilus CNRZ1066]
Length = 347
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 162/354 (45%), Positives = 216/354 (61%), Gaps = 19/354 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHP-NLSCPLVISDHLVSDLPAFLNSNDAI 59
M +FDF+LP IA P+ RD+++L+V+ P DH++ L N DA+
Sbjct: 1 MNTNDFDFELPEELIAQTPLKQRDASKLLVIDPVTREMTDTHFDHIIDQL----NPRDAL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V NNT+V+ A+L G + + L + W V A+P+K +K G + F
Sbjct: 57 VMNNTRVLPARLYGEK----TDTHGHVEFLLLKNTQGDQWEVLAKPAKRLKVGAKVSF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G RL ATV ++ + G ++ FS GI LE SL G +PLPPYI K ++ RD
Sbjct: 111 --GYGRLTATVTEELDHGGRIVEFSYDGIFLEVLESL-GEMPLPPYIHEK--LEDRDR-- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ D+H
Sbjct: 164 YQTVYAKENGSAAAPTAGLHFTPELLQKIEAKGVKLVYLTLHVGLGTFRPVSVDNIDEHE 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MHSE + A LNSVK+ GGRIV+VGTTS+R LET + DG + SG+TNIFI
Sbjct: 224 MHSEFYTLSQEAADTLNSVKTAGGRIVAVGTTSIRTLETIGNKYDGQLQADSGWTNIFIK 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY+F VD +NFHLPKSTL+MLVSAF G E + Y+HA+ YRF+S+GD
Sbjct: 284 PGYQFTVVDAFSTNFHLPKSTLVMLVSAFAGREFVLEAYKHAVQERYRFFSFGD 337
>gi|291522418|emb|CBK80711.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Coprococcus catus GD/7]
Length = 341
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 159/356 (44%), Positives = 204/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R S+RLMV+ IS H+ D+ +LN D +V
Sbjct: 1 MKTSDFYYDLPEELIAQDPLEDRSSSRLMVLDRESG---EISHHIFKDIIDYLNPEDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L GV+ I L R + W RP K K G L F
Sbjct: 58 INDTKVIPARLYGVK----EDTGAHIEILLLKRRENDVWETLVRPGKKAKPGTRLTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A VID G L+ F GI E + +G +PLPPYI K +D Y
Sbjct: 111 -GDGRLKAEVIDVVEEGNRLIHFEYEGI-FEEILDQLGEMPLPPYITHK----LQDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL+ + + GI++ VTLHVG GTF PVKVED H M
Sbjct: 165 QTVYAKHEGSAAAPTAGLHFTPELLAAIEAKGIRIARVTLHVGLGTFRPVKVEDVTQHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +N K RGGR+++VGTTS R LE+ EDG ++ G+T IFI PG
Sbjct: 225 HSEYYQVTQEAADIINDTKKRGGRVIAVGTTSTRTLESVADEDGTMHAAGGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STLLMLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YKFKCIDALITNFHLPESTLLMLVSALAGKEHIMHAYETAVQERYRFFSFGDAMFI 340
>gi|50914461|ref|YP_060433.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS10394]
gi|68053076|sp|Q5XBG3|QUEA_STRP6 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|50903535|gb|AAT87250.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS10394]
Length = 342
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 159/354 (44%), Positives = 216/354 (61%), Gaps = 19/354 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
M +FDF+LP IA P+ RDS++L+++ H + DH++ L N DA+
Sbjct: 1 MNTNDFDFELPEELIAQTPLEKRDSSKLLIIDHRQKTMVDSHFDHIIDQL----NPGDAL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V NNT+V+ A+L G + + L + W V A+P+K +K G ++F
Sbjct: 57 VMNNTRVLPARLYGEK----PDTHGHVELLLLKNTQGDQWEVLAKPAKRLKVGSQVNF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G RL+AT+ID+ G ++ FS GI LE SL G +PLPPYI K D
Sbjct: 111 --GDGRLKATIIDELEHGGRIVEFSYDGIFLEVLESL-GEMPLPPYIHEK----LEDAER 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT++LL ++ + G+ + ++TLHVG GTF PV V++ D+H
Sbjct: 164 YQTVYAKENGSAAAPTAGLHFTTDLLKKIEAKGVHLVYLTLHVGLGTFRPVSVDNLDEHD 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MHSE + AQ L VK GGR+V+VGTTS+R LET ++ G I SG+TNIFI
Sbjct: 224 MHSEFYSLSEEAAQTLRDVKQAGGRVVAVGTTSIRTLETIGSKFQGDIQADSGWTNIFIK 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY+F+ VD +NFHLPKSTL+MLVSAF G + + Y+HAI YRF+S+GD
Sbjct: 284 PGYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYRHAIDEKYRFFSFGD 337
>gi|85705247|ref|ZP_01036346.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseovarius
sp. 217]
gi|85670120|gb|EAQ24982.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseovarius
sp. 217]
Length = 362
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 160/358 (44%), Positives = 221/358 (61%), Gaps = 13/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP + IA RP PR +ARL+V I+D V+DL +L D +V
Sbjct: 1 MKLSDFDFDLPEALIATRPARPRRAARLLVAEGA-----AITDAGVADLGRWLRPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRRE--KEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L+G+R + + +I TL + +W +P K + G+ + F
Sbjct: 56 LNDTRVIPARLSGLRHRSGAQGDTAAKIEVTLLEPGAEGTWGALIKPLKKVSVGEEIVF- 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
RL A V++ G+ L F++ + + ++ G +PLPPYIA +RP D +D V
Sbjct: 115 ----SERLSA-VLEAKEEGQGRLRFNLRAEDFDAALAEAGAMPLPPYIAARRPADDQDKV 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LL+ L ++G+ VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVWARAPGAVAAPTASLHFDEALLAELAAMGVGFTHVTLHVGAGTFLPVKVEDVTSH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A + + ++ GGRI+ VGTT+LRL+ETA G I WSG T+IFI
Sbjct: 230 KMHAEWGEVSEEAAAEIAATRAAGGRIIPVGTTALRLIETAARATGEIAAWSGDTDIFIY 289
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PG+ FR D LM+NFHLPKSTL+MLVSA G ++Y HA++ YRF+SYGD SLL
Sbjct: 290 PGFEFRVTDALMTNFHLPKSTLMMLVSALMGQGVIDRIYAHAVARGYRFFSYGDASLL 347
>gi|325694040|gb|EGD35958.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK150]
Length = 342
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 159/353 (45%), Positives = 210/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV V SD + L DA+V
Sbjct: 1 MNTADFDFDLPEELIAQTPLEKRDASRLLVVDKETG---VFSDQHFDQIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGIK----PETGGHVELLLLKNTQGDDWEVLAKPAKRLRVGSQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+++ + G ++ F GI LE SL G +PLPPYI K R Y
Sbjct: 111 -GDGRLTATVVEELDHGGRIVRFGYEGIFLEVLESL-GEMPLPPYIHEKLADRER----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ G+K+ ++TLHVG GTF PV V+ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLEQIADKGVKLVYLTLHVGLGTFRPVSVDSLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ GGR+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRQVKANGGRVIAVGTTSIRTLETIGSKFQGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY ++ VD +NFHLPKSTL+MLVSAF G T + Y+HAI+ YRF+S+GD
Sbjct: 285 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRSLTLEAYEHAIAERYRFFSFGD 337
>gi|239624077|ref|ZP_04667108.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239522108|gb|EEQ61974.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 358
Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 151/356 (42%), Positives = 214/356 (60%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+F FDLP IA P+ R S+RL+V+ + + + D+ +L D +V
Sbjct: 10 MDVKDFYFDLPEELIAQDPLKDRSSSRLLVLDKDTG---EVQHRVFRDIVEYLRPGDCLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L GV+ +I L R + W RP K + G ++ F
Sbjct: 67 INDTKVIPARLFGVK----KDTGAKIEVLLLKRRENDIWETLVRPGKKCRPGTVIEF--- 119
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L TV++ + G L+ FS GI E + +G +PLPPYI + +D Y
Sbjct: 120 -GEGLLSGTVVETVDDGNRLIRFSYKGI-FEEILDQLGQMPLPPYITH----ELKDKNRY 173
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT+ LL ++ +G+++ VTLHVG GTF PVKVE+ DH M
Sbjct: 174 QTVYAKHEGSAAAPTAGLHFTNELLKQIEDMGVRIAHVTLHVGLGTFRPVKVENVLDHHM 233
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +N K+ GGR++ VGTTS R +E+A+T+DGI+ +G+T IFI PG
Sbjct: 234 HSEFYVVEESEAKKVNDTKAAGGRVICVGTTSCRTVESASTDDGILQAKTGWTEIFIYPG 293
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 294 YRFKVLDALITNFHLPESTLVMLVSALAGREHILDAYKEAVRERYRFFSFGDAMFI 349
>gi|323127653|gb|ADX24950.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus dysgalactiae subsp. equisimilis ATCC
12394]
Length = 342
Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 159/354 (44%), Positives = 214/354 (60%), Gaps = 19/354 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
M +FDFDLP IA P+ RDS++L+++ H + DH++ L N DA+
Sbjct: 1 MNTNDFDFDLPEELIAQTPLEKRDSSKLLIIDHEQKTMIDSHFDHIIDQL----NPGDAL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V NNT+V+ A+L G + + L + W V A+P+K +K G + F
Sbjct: 57 VMNNTRVLPARLYGEK----PDTHGHVELLLLKNTHGDQWEVLAKPAKRLKVGSQVSF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G RL AT++++ G ++ F+ GI LE SL G +PLPPYI K R
Sbjct: 111 --GDGRLTATIVEELEHGGRIVEFNYEGIFLEVLESL-GEMPLPPYIHEKLDDAER---- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT+NLLS++ + G+ + ++TLHVG GTF PV V++ DDH
Sbjct: 164 YQTVYAKENGSAAAPTAGLHFTTNLLSKIEAKGVHLVYLTLHVGLGTFRPVSVDNLDDHD 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MHSE + AQ L VK GGR+V+VGTTS+R LET ++ G I SG+TNIFI
Sbjct: 224 MHSEFYSLSEEAAQTLRDVKKAGGRVVAVGTTSIRTLETIGSKFQGDIQADSGWTNIFIK 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY+F+ VD +NFHLPKSTL+MLVSAF G + Y+HA+ YRF+S+GD
Sbjct: 284 PGYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLDAYKHAVDEKYRFFSFGD 337
>gi|328945507|gb|EGG39658.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK1087]
Length = 342
Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 158/353 (44%), Positives = 211/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV SD + L DA+V
Sbjct: 1 MNTADFDFDLPEELIAQTPLEKRDASRLLVVDKETGA---FSDQHFDQIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGIK----PETGGHVELLLLKNTQGDDWEVLAKPAKRLRVGAQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+++ + G ++ F+ GI LE SL G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVVEELDHGGRIVRFAYEGIFLEVLESL-GEMPLPPYIHEKLA----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V+ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLEQIAAKGVKLVYLTLHVGLGTFRPVSVDSLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ GGR+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRQVKANGGRVIAVGTTSIRTLETIGSKFQGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY ++ VD +NFHLPKSTL+MLVSAF G T + Y+HAI+ YRF+S+GD
Sbjct: 285 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRSLTLEAYEHAIAERYRFFSFGD 337
>gi|188589166|ref|YP_001920353.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum E3 str. Alaska E43]
gi|251778245|ref|ZP_04821165.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum E1 str. 'BoNT E Beluga']
gi|238689663|sp|B2V339|QUEA_CLOBA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|188499447|gb|ACD52583.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum E3 str. Alaska E43]
gi|243082560|gb|EES48450.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum E1 str. 'BoNT E Beluga']
Length = 341
Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 157/361 (43%), Positives = 205/361 (56%), Gaps = 26/361 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RD++RLMV+ IS D+ +LN D +V
Sbjct: 1 MNVKDFDFYLPEELIAQHPLEKRDTSRLMVLDKETGE---ISHKNFYDIIDYLNEGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKE-----ISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
NNT+V+ A+L G EKE I L RV + W A+P K + G
Sbjct: 58 LNNTRVMPARLIG---------EKEGTGGKIEFLLLKRVDKDRWECLAKPGKSARVGRRF 108
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
F G +L+A V++ G ++ F GI E + +G +PLPPYI +
Sbjct: 109 TF----GDGKLKAEVVEVKENGNRIVEFYYEGI-FEEVLDSLGEMPLPPYIHER----LE 159
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y+K GS AAPTAGLHFT LL ++ GI + +VTLHVG GTF PVKVE
Sbjct: 160 DRERYQTVYSKENGSAAAPTAGLHFTEELLHKIKEKGINIAYVTLHVGLGTFRPVKVETI 219
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+DH MHSE + A+ +N K RG R++SVGTTS R LET EDG + SG+TNI
Sbjct: 220 EDHEMHSEYYHLSKEDAEVINETKKRGNRVISVGTTSTRTLETIADEDGNVKETSGWTNI 279
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGY+F+ VD L++NFHLP+STL+MLVS G E Y+ A+ YRF+S+GD
Sbjct: 280 FIYPGYKFKVVDRLITNFHLPESTLIMLVSTLAGKEHVMNAYEEAVKERYRFFSFGDAMF 339
Query: 356 L 356
+
Sbjct: 340 I 340
>gi|20807638|ref|NP_622809.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Thermoanaerobacter tengcongensis MB4]
gi|22096013|sp|Q8RAN0|QUEA_THETN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|20516181|gb|AAM24413.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Thermoanaerobacter tengcongensis MB4]
Length = 341
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 152/356 (42%), Positives = 208/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M EF FDLP IA P+ R S+RLM++ I + ++ +L D +V
Sbjct: 1 MKRSEFYFDLPEELIAQEPLEDRASSRLMILDRRTGE---IKHDIFKNITKYLKEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G R ++ L R S N W V +P K K G + F
Sbjct: 58 LNDTKVIPARLIGQR----EDSGGKVELLLLRRTSMNEWEVLVKPGKRAKVGKRVVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L A +ID G + F G+ E + +G +P+PPYI +K +D Y
Sbjct: 111 -GNGELVAEIIDTTEAGGRIARFYYDGV-FEEVLDRLGEMPVPPYIKKK----LKDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL + ++G+K F+TLHVG GTF PVK E ++H M
Sbjct: 165 QTVYAKYEGSAAAPTAGLHFTEELLDEIRNMGVKTVFITLHVGLGTFRPVKEEIIENHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A+A+N + GGRI++VGTTS R LET E G I+P SG+T+IFI PG
Sbjct: 225 HEEFYIVTEEAAKAINEARKNGGRIIAVGTTSTRTLETVADESGYIHPKSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+A+D +++NFHLP+STL+M+VSAF G E + Y+ AI + YRF+S+GD L+
Sbjct: 285 YKFKAIDGMITNFHLPESTLIMMVSAFAGKENIMRAYKVAIENKYRFFSFGDAMLI 340
>gi|288555345|ref|YP_003427280.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
pseudofirmus OF4]
gi|288546505|gb|ADC50388.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
pseudofirmus OF4]
Length = 341
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 153/352 (43%), Positives = 215/352 (61%), Gaps = 16/352 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDF LP IA P+ R ++RL+V+ + I D + S + +L S D +V
Sbjct: 1 MDVRDFDFYLPDELIAQTPLLDRTASRLLVLDKDNGA---IKDDVFSSITDYLKSGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L GV+ +I L ++ + W A+P+K +KKG + F
Sbjct: 58 LNDTRVLPARLYGVK----EDTGAKIELLLLKQLEGDKWETLAKPAKRVKKGTTITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L AT I++ + G ++ + GI L + +G +PLPPYI K +D D Y
Sbjct: 111 -GEGLLTATCIEETDQGGRVVELAYEGI-LHEVLDQLGEMPLPPYI--KEQLD--DQERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +AK +GS AAPTAGLHFT +LL L G+ + F+TLHVG GTF PV VED + H M
Sbjct: 165 QTVFAKNRGSAAAPTAGLHFTEDLLQTLQDKGVHLAFITLHVGLGTFRPVSVEDVESHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + TA+ LN VK GG++V+VGTTS R LET E+G SG+T+IFI PG
Sbjct: 225 HAEYYQMSEGTARLLNEVKENGGKVVAVGTTSARTLETIMNENGTYCEASGWTSIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
Y+F+ +D L++NFHLPKSTL+MLVSA G E + Y HA+ YRF+S+GD
Sbjct: 285 YKFKGIDGLLTNFHLPKSTLVMLVSALAGREHILQAYNHAVKERYRFFSFGD 336
>gi|15613790|ref|NP_242093.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
halodurans C-125]
gi|20139775|sp|Q9KDI6|QUEA_BACHD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|10173843|dbj|BAB04946.1| S-adenosylmethionine tRNA ribosyltransferase [Bacillus halodurans
C-125]
Length = 347
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 152/360 (42%), Positives = 215/360 (59%), Gaps = 16/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDF LP IA P+ R ++RL+V+ + + D DL F+ + D +V
Sbjct: 1 MNVRDFDFHLPEKLIAQTPLKDRTASRLLVLDKHTGA---VEDKKFPDLLQFIEAGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L GV+ ++ L ++ + W +P+K +K G I+ F
Sbjct: 58 LNDTRVLPARLFGVK----EETGAQVEVLLLKQMEGDRWETLVKPAKRLKVGTIIRF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L AT + + G +L FS GI + +G +PLPPYI K +D +D Y
Sbjct: 111 -GNGELTATCVQELEHGGRVLEFSYEGI-FHEVLDQLGEMPLPPYI--KEQLDDKDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +AK +GS AAPTAGLHFT LL +L G+ + F+TLHVG GTF PV VE+ ++H M
Sbjct: 165 QTVFAKNRGSAAAPTAGLHFTEELLDQLKQKGVHLAFITLHVGLGTFRPVSVEEIEEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + A TA+ LN VK +GGRI++VGTTS R LET E SG+T+IFI PG
Sbjct: 225 HAEFYQMSAGTARLLNEVKRQGGRIIAVGTTSARTLETIRQEHDEFVETSGWTSIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
Y F+ +D L++NFHLPKSTL+MLVSA G E Y HA+ +YRF+S+GD ++ K+
Sbjct: 285 YEFKGIDGLITNFHLPKSTLVMLVSALAGRENLLNAYAHAVKQSYRFFSFGDAMFIYDKK 344
>gi|319790693|ref|YP_004152326.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermovibrio ammonificans HB-1]
gi|317115195|gb|ADU97685.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermovibrio ammonificans HB-1]
Length = 343
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 161/358 (44%), Positives = 208/358 (58%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD+ LP IA P PRDSARLMV+H + I + D+ +L D +V
Sbjct: 1 MKVSDFDYHLPKELIAKFPAEPRDSARLMVLHRDTGE---IEHRIFRDIVDYLVPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G R + + L +V P+ W V A+P+K +K G L F
Sbjct: 58 LNDTKVIPARLLG-RLSTGAK----VELLLLRQVEPDLWEVMAKPAKKLKTGKELVF--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSI-SGIELERQISLVGTIPLPPYIARK-RPIDARDYV 178
+ L TV G L+ F + G+ + VG +PLPPYI R+ RP D + Y
Sbjct: 110 --EGGLRGTVEGYAGEGRRLVRFRVPEGVSFMELLEQVGHVPLPPYIEREERPEDRKLY- 166
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
QT +A G+VAAPTAGLHFT LL RL GI + VTLHVG GTF PVKVE+ + H
Sbjct: 167 --QTVFASRPGAVAAPTAGLHFTEELLERLRDKGIIIKTVTLHVGPGTFKPVKVEEVEKH 224
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
M E+ + TA +N K G RIV+VGTT +R LE+A EDG + G TN+FI
Sbjct: 225 QMDYEVYSVPQETALEVNRAKQEGRRIVAVGTTVVRTLESAAGEDGTVKAGEGSTNLFIY 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGYRF+ VD L++NFHLP+STL+MLVSAF G E+ Y+ A+ YRFYSYGD +
Sbjct: 285 PGYRFKVVDALVTNFHLPRSTLIMLVSAFAGREKVLNAYREAVKEGYRFYSYGDAMFI 342
>gi|290580879|ref|YP_003485271.1| putative S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Streptococcus mutans NN2025]
gi|254997778|dbj|BAH88379.1| putative S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Streptococcus mutans NN2025]
Length = 342
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 159/354 (44%), Positives = 220/354 (62%), Gaps = 19/354 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
M +FDF+LP + IA P+ RDS++L+VV H + DH++ +L N DA+
Sbjct: 1 MNTSDFDFNLPEALIAQTPLKKRDSSKLLVVDHQKKTMKDTHFDHIIDEL----NPGDAL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V N+T+V+ A+L+G + + L + + W V A+P+K +K G + F
Sbjct: 57 VMNDTRVLPARLHGEKTV----THGHVELLLLKNIQGDQWEVLAKPAKRLKIGSHISF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G RL+A + ++ N G ++ FS GI LE SL G +PLPPYI K ++ RD
Sbjct: 111 --GDGRLKAIIKEELNHGGRIVEFSYEGIFLEVLESL-GEMPLPPYIHEK--LEDRDR-- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT LLS++ + G+K+ ++TLHVG GTF PV V++ ++H
Sbjct: 164 YQTVYAKENGSAAAPTAGLHFTEELLSKIEAKGVKLVYLTLHVGLGTFRPVSVDNVEEHQ 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MHSE + AQ L +K+ GGRIV+VGTTS+R LET + G I SG+TNIFI
Sbjct: 224 MHSEFYSLSPEAAQTLKDIKANGGRIVAVGTTSIRTLETIGNKFAGQIEADSGWTNIFIK 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY+F+ VD +NFHLPKSTL+MLVSAF G + Y+HA+ YRF+S+GD
Sbjct: 284 PGYQFKIVDAFSTNFHLPKSTLVMLVSAFAGRDFILDAYKHAVDKHYRFFSFGD 337
>gi|19746363|ref|NP_607499.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS8232]
gi|306827089|ref|ZP_07460386.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes ATCC 10782]
gi|24212183|sp|Q8P0D9|QUEA_STRP8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|19748559|gb|AAL97998.1| putative S-adenosylmethionine-tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS8232]
gi|304430723|gb|EFM33735.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes ATCC 10782]
Length = 342
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 158/354 (44%), Positives = 216/354 (61%), Gaps = 19/354 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
M +FDF+LP IA P+ RDS++L+++ H + DH++ L N DA+
Sbjct: 1 MNTNDFDFELPEELIAQTPLEKRDSSKLLIIDHRQKTMVDSHFDHIIDQL----NPGDAL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V NNT+V+ A+L G + + L + W V A+P+K +K G ++F
Sbjct: 57 VMNNTRVLPARLYGEK----PDTHGHVELLLLKNTQGDQWEVLAKPAKRLKVGSQVNF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G RL+AT+ID+ G ++ FS GI LE SL G +PLPPYI K D
Sbjct: 111 --GDGRLKATIIDELEHGGRIVEFSYDGIFLEVLESL-GEMPLPPYIHEK----LEDAER 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT++LL ++ + G+ + ++TLHVG GTF PV V++ D+H
Sbjct: 164 YQTVYAKENGSAAAPTAGLHFTTDLLKKIEAKGVHLVYLTLHVGLGTFRPVSVDNLDEHD 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MHSE + AQ L VK GGR+V+VGTTS+R LET ++ G I SG+TNIFI
Sbjct: 224 MHSEFYSLSEEAAQTLRDVKQAGGRVVAVGTTSIRTLETIGSKFQGDIQADSGWTNIFIK 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY+F+ VD +NFHLPKSTL+MLVSAF G + + Y+HA+ YRF+S+GD
Sbjct: 284 PGYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYRHAVDEKYRFFSFGD 337
>gi|296132706|ref|YP_003639953.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Thermincola
sp. JR]
gi|296031284|gb|ADG82052.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Thermincola
potens JR]
Length = 341
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 157/357 (43%), Positives = 212/357 (59%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDF+LP IA PV PRD +RL+VV+ + I + ++ D +V
Sbjct: 1 MKVADFDFELPEELIAQEPVEPRDHSRLLVVNRDNGN---IEHKRFYNCIDYIEPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L F +I L R+ + W V +P K +K G ++ F
Sbjct: 58 VNNTRVLPARL----FGEKKGSGAKIEFVLLKRIDRDKWEVLVKPGKRVKPGTVILF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G LEA V+ +G L+ F GI E + G +PLPPYI K+ +D R+ Y
Sbjct: 111 -GGGLLEAFVLQTTESGGRLVEFRYEGI-FEELLDRFGQMPLPPYI--KKQLDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ G+ + V LHVG GTF PVKV++ +DH M
Sbjct: 165 QTVYAKASGSAAAPTAGLHFTEELLKKMHEKGVVIAEVMLHVGLGTFRPVKVDNVEDHRM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E I+ TA +N + RG +I++VGTTS R LETA G + P G+T+IFI PG
Sbjct: 225 HAEYYEINEETANLINRQRDRGHKIIAVGTTSCRALETAADSSGNLKPGCGWTDIFIFPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YRF+AVD L++NFHLPKSTL+MLVSAF G + K YQ AI+ YRF+S+GD ++
Sbjct: 285 YRFKAVDRLITNFHLPKSTLVMLVSAFAGKDLIMKAYQEAIAEKYRFFSFGDAMMIL 341
>gi|158320752|ref|YP_001513259.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Alkaliphilus oremlandii OhILAs]
gi|158140951|gb|ABW19263.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Alkaliphilus oremlandii OhILAs]
Length = 341
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 156/356 (43%), Positives = 205/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M K+FD+DLP IA P+ RD +RLMV+ I+ D+ FLN D +V
Sbjct: 1 METKDFDYDLPEELIAQVPLEHRDQSRLMVLDKETGD---IAHRHFYDIIDFLNEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + I L R+ ++W +P K K G F
Sbjct: 58 LNDTRVLPARLIGEKEGSGGK----IEFLLLKRIELDTWEALVKPGKKAKVGSRFIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL VI G ++ F G+ E + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLCTEVIGIGEEGSRIIKFQYDGV-FEDILDQLGQMPLPPYITEK----LEDKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K QGS AAPTAGLHFTS LL +L G+K ++TLHVG GTF PVKVE ++H M
Sbjct: 165 QTVYSKNQGSAAAPTAGLHFTSELLKKLEEKGVKTAYITLHVGLGTFRPVKVEKIEEHTM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ID A +N K+ G RI++VGTTS R LE+ T+DGII P SG+T+IFI PG
Sbjct: 225 HSEFYTIDDKNANIINEAKANGKRIIAVGTTSCRTLESVATKDGIIEPKSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+ VD L++NFHLP+STL+MLVS G E T Y+ A+ YRF+S+GD +
Sbjct: 285 YDFKIVDNLITNFHLPESTLIMLVSTLAGKEATLNAYKIAVKEGYRFFSFGDAMFI 340
>gi|238924342|ref|YP_002937858.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Eubacterium
rectale ATCC 33656]
gi|238876017|gb|ACR75724.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Eubacterium
rectale ATCC 33656]
gi|291529393|emb|CBK94979.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Eubacterium rectale M104/1]
Length = 352
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 155/356 (43%), Positives = 207/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FD+DLP IA P+ R S+RLMV+ +S H+ ++ +L D +V
Sbjct: 1 MDVKDFDYDLPEELIAQDPLEDRSSSRLMVLDKKTG---EVSHHVFKEIVKYLRPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L GV+ + + I L R + W +P K K G + F
Sbjct: 58 LNNTKVIPARLFGVKEGTMAK----IEILLLKRRQNDVWETLVKPGKKAKPGTKIIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L VID + G L+ FS GI E + +G +PLPPYI + +D Y
Sbjct: 111 -GDGLLTGEVIDVVDDGNRLIQFSYEGI-FEEILDKLGQMPLPPYITHQ----LKDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ G+ + VTLHVG GTF PVKV++ DH M
Sbjct: 165 QTVYAKYDGSAAAPTAGLHFTKELLQQVKDKGVDIAEVTLHVGLGTFRPVKVDNVLDHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +N+ K GGRI+SVGTTS R LE A+ E+G++ SG+T+IFI PG
Sbjct: 225 HSEFYMVSQEAADKINNAKKNGGRIISVGTTSTRTLEAASDENGMLKECSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YSFKVIDCLITNFHLPQSTLVMLVSALAGREHVLNAYKEAVEERYRFFSFGDAMFI 340
>gi|291525119|emb|CBK90706.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Eubacterium rectale DSM 17629]
Length = 352
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 155/356 (43%), Positives = 207/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FD+DLP IA P+ R S+RLMV+ +S H+ ++ +L D +V
Sbjct: 1 MDVKDFDYDLPEELIAQDPLEDRSSSRLMVLDKKTG---EVSHHVFKEIVKYLRPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L GV+ + + I L R + W +P K K G + F
Sbjct: 58 LNNTKVIPARLFGVKEGTMAK----IEILLLKRRQNDVWETLVKPGKKAKPGTKIIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L VID + G L+ FS GI E + +G +PLPPYI + +D Y
Sbjct: 111 -GDGLLTGEVIDVVDDGNRLIQFSYEGI-FEEILDKLGQMPLPPYITHQ----LKDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ G+ + VTLHVG GTF PVKV++ DH M
Sbjct: 165 QTVYAKYDGSAAAPTAGLHFTKELLQQVKDKGVDIAEVTLHVGLGTFRPVKVDNVLDHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +N+ K GGRI+SVGTTS R LE A+ E+G++ SG+T+IFI PG
Sbjct: 225 HSEFYMVSQEAADKINNAKKNGGRIISVGTTSTRTLEAASDENGMLKECSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YSFKVIDCLITNFHLPQSTLVMLVSALAGREHVLNAYKEAVEERYRFFSFGDAMFI 340
>gi|324990584|gb|EGC22520.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK353]
Length = 342
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 159/353 (45%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV SD + L DA+V
Sbjct: 1 MNTADFDFDLPEELIAQTPLEKRDASRLLVVDKETGA---FSDQHFDQIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGIK----PETGGHVELLLLKNTQGDDWEVLAKPAKRLRVGSHISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+++ + G ++ F GI LE SL G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVVEELDHGGRIVRFGYEGIFLEVLESL-GEMPLPPYIHEKLA----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLEQIAAKGVKLVYLTLHVGLGTFRPVSVNSLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ GGR+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRQVKANGGRVIAVGTTSIRTLETIGSKFQGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY ++ VD +NFHLPKSTL+MLVSAF G T K Y+HAI+ YRF+S+GD
Sbjct: 285 GYDWKIVDAFSTNFHLPKSTLVMLVSAFAGRSLTLKAYEHAIAERYRFFSFGD 337
>gi|291562523|emb|CBL41339.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[butyrate-producing bacterium SS3/4]
Length = 341
Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 154/356 (43%), Positives = 208/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+F+LPP IA P+ R ++RL+V+ I D+ +L D +V
Sbjct: 1 MNVTDFNFELPPELIAQDPLEDRAASRLLVLDKKTG---EIEHRHFRDILKYLKKGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G H + I L R S N W +P K +K G + F
Sbjct: 58 INDTKVIPARLMG----HKIGTDAGIEVLLLKRKSDNVWETLVKPGKKMKVGAEVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+ VID + G L+ F GI E + +G +PLPPYI + +D Y
Sbjct: 111 -GDGLLKGKVIDVVDEGNRLIQFEYDGI-FEEILDKLGQMPLPPYITHQ----LKDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL + +G+K+ VTLHVG GTF PVKV+ ++H M
Sbjct: 165 QTVYAKNEGSAAAPTAGLHFTKELLQEIEEMGVKIAHVTLHVGLGTFRPVKVDTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +N K+ GGR++ VGTTS R LE+AT +DGI+ SG+T IFI PG
Sbjct: 225 HSEFYMVEESEAKKINDTKANGGRVICVGTTSCRTLESATGDDGILKAGSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA G E YQ AI YRF+S+GD +
Sbjct: 285 YKFKILDCLITNFHLPESTLVMLVSALAGREHILNAYQEAIKERYRFFSFGDAMFI 340
>gi|327461604|gb|EGF07935.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK1]
gi|327489463|gb|EGF21256.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK1058]
Length = 342
Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 159/353 (45%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV SD + L DA+V
Sbjct: 1 MNTADFDFDLPEELIAQTPLEKRDASRLLVVDKETGA---FSDQHFDQIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGIK----PETGGHVELLLLKNTQGDDWEVLAKPAKRLRVGAQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATVI++ G ++ F+ GI LE SL G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVIEELEHGGRIVRFAYEGIFLEVLESL-GEMPLPPYIHEKLA----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V+ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLEQIAAKGVKLVYLTLHVGLGTFRPVSVDSLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK GGR+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRQVKGNGGRVIAVGTTSIRTLETIGSKFQGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY ++ VD +NFHLPKSTL+MLVSAF G T + Y+HAI+ YRF+S+GD
Sbjct: 285 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRSLTLEAYEHAIAEHYRFFSFGD 337
>gi|167037429|ref|YP_001665007.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|256752587|ref|ZP_05493441.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter ethanolicus CCSD1]
gi|320115842|ref|YP_004186001.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|238687693|sp|B0K958|QUEA_THEP3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|166856263|gb|ABY94671.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|256748525|gb|EEU61575.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter ethanolicus CCSD1]
gi|319928933|gb|ADV79618.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter brockii subsp. finnii Ako-1]
Length = 341
Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 150/359 (41%), Positives = 209/359 (58%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M EF F+LP IA P+ R S+RLM+++ I + ++ +L D +V
Sbjct: 1 MKRSEFYFELPEELIAQEPLEDRASSRLMILNKKTGE---IEHDIFKNITKYLKPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREK---EISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
NNTKVI A+L I RRE +I L R+S N W + +P + K G F
Sbjct: 58 LNNTKVIPARL-------IGRREDSGGKIEFVLLKRISNNEWEILVKPGRRAKIGSKFVF 110
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
G L A ++D + G ++ F G+ E + +G +P+PPYI +K R
Sbjct: 111 ----GNGELIAEILDTTDVGGRIVRFYYEGV-FEEVLDKLGEMPVPPYIKKKLKNKDR-- 163
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YAK +GS AAPTAGLHFT LL ++ +G+K F+TLHVG GTF PVK E ++
Sbjct: 164 --YQTVYAKYEGSAAAPTAGLHFTEELLEKIRQMGVKTVFITLHVGLGTFRPVKEEVIEN 221
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH E + A+ +N + GGRI++VGTTS R LET EDG I SG+T+IFI
Sbjct: 222 HKMHEEFYIVTKEAAEEINETRKSGGRIIAVGTTSTRTLETVADEDGYIKEKSGWTDIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+F+A+D +++NFHLP+STL+M+VSAF G E + Y+ A+ YRF+S+GD L+
Sbjct: 282 YPGYKFKAIDGMITNFHLPESTLIMMVSAFAGKENIMRAYKIAVEKKYRFFSFGDAMLI 340
>gi|187778350|ref|ZP_02994823.1| hypothetical protein CLOSPO_01942 [Clostridium sporogenes ATCC
15579]
gi|187771975|gb|EDU35777.1| hypothetical protein CLOSPO_01942 [Clostridium sporogenes ATCC
15579]
Length = 341
Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 153/364 (42%), Positives = 212/364 (58%), Gaps = 32/364 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RD ARL+V+ I D + D+ +L ND +V
Sbjct: 1 MKVKDFDFYLPEELIAQHPMEKRDEARLLVLDKKTG---EIEDKIFKDILDYLTPNDCLV 57
Query: 61 FNNTKVITAQLNG--------VRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKG 112
NNT+V+ A+L G + F + R+EK++ W +P K + G
Sbjct: 58 LNNTRVLPARLIGSKEETGGKMEFLLLKRKEKDV------------WETLVKPGKRAQIG 105
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
F G L+A VI G ++ F GI E + +G +PLPPYI K +
Sbjct: 106 ARFIF----GNGELKAEVIGMGEEGSRIVKFYYEGI-FEEILDQLGQMPLPPYIKEK--L 158
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D ++ YQT Y+K +GS AAPTAGLHFT LL ++ G+K+ F+TLHVG GTF PVKV
Sbjct: 159 DDKEM--YQTVYSKEEGSAAAPTAGLHFTEELLEKIKGKGVKLAFLTLHVGLGTFRPVKV 216
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
ED +HIMHSE +D TA+ +N+ + +GGR+++VGTTS R LET +G + SG+
Sbjct: 217 EDIQEHIMHSEYYKMDKKTAKIINTTREKGGRVIAVGTTSCRTLETIGDIEGKVKEQSGW 276
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFI PGY+++ VD L++NFHLP+STLLMLVSA G + Y A+ YRF+S+GD
Sbjct: 277 TDIFIYPGYKYKVVDALITNFHLPQSTLLMLVSALAGRDNIMNAYNMAVEKEYRFFSFGD 336
Query: 353 TSLL 356
+
Sbjct: 337 AMFI 340
>gi|171778635|ref|ZP_02919731.1| hypothetical protein STRINF_00583 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171282592|gb|EDT48016.1| hypothetical protein STRINF_00583 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 342
Score = 280 bits (715), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 161/354 (45%), Positives = 214/354 (60%), Gaps = 19/354 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
M +FDF+LP IA P+ RDS++L+V+ H DH++ +L NS DA+
Sbjct: 1 MHTDDFDFNLPEELIAQTPLEKRDSSKLLVIDHKTHEMVDAHFDHILDEL----NSGDAL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V NNT+V+ A+L G + + L + W V A+P+K + G + F
Sbjct: 57 VMNNTRVLPARLYGEK----PDTHGHVELLLLKNTEGDQWEVLAKPAKRLHVGVKVSF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G RL ATV+++ + G ++ F GI LE SL G +PLPPYI K R
Sbjct: 111 --GDGRLTATVVEELDNGGRIVEFDYDGIFLEVLESL-GEMPLPPYIHEKLDDPNR---- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT LL ++ + G+K+ +VTLHVG GTF PV V++ ++H
Sbjct: 164 YQTVYAKENGSAAAPTAGLHFTKELLEKIEAKGVKLVYVTLHVGLGTFRPVSVDNVEEHE 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MHSE + AQ L VK+ GGR+V+VGTTS+R LET ++ +G I SG+TNIFI
Sbjct: 224 MHSEFYRLSEEAAQTLRDVKATGGRVVAVGTTSIRTLETIGSKFNGEIKADSGWTNIFIK 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY F+ VD +NFHLPKSTL+MLVSAF G E + YQHAI YRF+S+GD
Sbjct: 284 PGYDFKVVDAFSTNFHLPKSTLVMLVSAFAGREFVLEAYQHAIDERYRFFSFGD 337
>gi|167040096|ref|YP_001663081.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter sp. X514]
gi|300914179|ref|ZP_07131495.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter sp. X561]
gi|307724585|ref|YP_003904336.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter sp. X513]
gi|238687548|sp|B0K0M0|QUEA_THEPX RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|166854336|gb|ABY92745.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter sp. X514]
gi|300889114|gb|EFK84260.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter sp. X561]
gi|307581646|gb|ADN55045.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter sp. X513]
Length = 341
Score = 279 bits (714), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 150/359 (41%), Positives = 208/359 (57%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M EF F+LP IA P+ R S+RLM+++ I + ++ +L D +V
Sbjct: 1 MKRSEFYFELPEELIAQEPLEDRASSRLMILNKKTGE---IEHDIFKNITKYLKPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREK---EISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
NNTKVI A+L I RRE +I L R+S N W + +P + K G F
Sbjct: 58 LNNTKVIPARL-------IGRREDSGGKIEFVLLKRISNNEWEILVKPGRRAKIGSKFVF 110
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
G L A ++D G ++ F G+ E + +G +P+PPYI +K R
Sbjct: 111 ----GNGELIAEILDTTEVGGRIVRFYYEGV-FEEVLDKLGEMPVPPYIKKKLKNKDR-- 163
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YAK +GS AAPTAGLHFT LL ++ +G+K F+TLHVG GTF PVK E ++
Sbjct: 164 --YQTVYAKYEGSAAAPTAGLHFTEELLEKIRQMGVKTVFITLHVGLGTFRPVKEEVIEN 221
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH E + A+ +N + GGRI++VGTTS R LET EDG I SG+T+IFI
Sbjct: 222 HKMHEEFYIVTKEAAEEINETRKSGGRIIAVGTTSTRTLETVADEDGYIKEKSGWTDIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+F+A+D +++NFHLP+STL+M+VSAF G E + Y+ A+ YRF+S+GD L+
Sbjct: 282 YPGYKFKAIDGMITNFHLPESTLIMMVSAFAGKENIMRAYKIAVEKKYRFFSFGDAMLI 340
>gi|71903796|ref|YP_280599.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS6180]
gi|94988817|ref|YP_596918.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS9429]
gi|94992703|ref|YP_600802.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS2096]
gi|139473569|ref|YP_001128285.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes str. Manfredo]
gi|91207330|sp|Q48SR6|QUEA_STRPM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|166218745|sp|Q1JB00|QUEA_STRPB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|166218746|sp|Q1JL45|QUEA_STRPC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|166218749|sp|A2RDX5|QUEA_STRPG RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|71802891|gb|AAX72244.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS6180]
gi|94542325|gb|ABF32374.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS9429]
gi|94546211|gb|ABF36258.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS2096]
gi|134271816|emb|CAM30050.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes str. Manfredo]
Length = 342
Score = 279 bits (714), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 158/354 (44%), Positives = 215/354 (60%), Gaps = 19/354 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
M +FDF+LP IA P+ RDS++L+++ H + DH++ L N DA+
Sbjct: 1 MNTNDFDFELPEELIAQTPLEKRDSSKLLIIDHRQKTMVDSHFDHIIDQL----NPGDAL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V NNT+V+ A+L G + + L + W V A+P+K +K G ++F
Sbjct: 57 VMNNTRVLPARLYGEK----PDTHGHVELLLLKNTQGDQWEVLAKPAKRLKVGSQVNF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G RL+AT+ID+ G ++ FS GI LE SL G +PLPPYI K D
Sbjct: 111 --GDGRLKATIIDELEHGGRIVEFSYDGIFLEVLESL-GEMPLPPYIHEK----LEDAER 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT++LL ++ + G+ + ++TLHVG GTF PV V++ D+H
Sbjct: 164 YQTVYAKENGSAAAPTAGLHFTTDLLKKIEAKGVHLVYLTLHVGLGTFRPVSVDNLDEHD 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MHSE + AQ L VK GGR+V+VGTTS+R LET + G I SG+TNIFI
Sbjct: 224 MHSEFYSLSEEAAQTLRDVKQAGGRVVAVGTTSIRTLETIGGKFQGDIQADSGWTNIFIK 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY+F+ VD +NFHLPKSTL+MLVSAF G + + Y+HA+ YRF+S+GD
Sbjct: 284 PGYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYRHAVDEKYRFFSFGD 337
>gi|209559631|ref|YP_002286103.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes NZ131]
gi|238058400|sp|B5XM46|QUEA_STRPZ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|209540832|gb|ACI61408.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase
[Streptococcus pyogenes NZ131]
Length = 342
Score = 279 bits (714), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 157/354 (44%), Positives = 215/354 (60%), Gaps = 19/354 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
M +FDF+LP IA P+ RDS++L+++ H + DH++ L N DA+
Sbjct: 1 MNTNDFDFELPEELIAQTPLEKRDSSKLLIIDHRQKTMVDSHFDHIIDQL----NPGDAL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V NNT+V+ A+L G + + L + W V A+P+K +K G ++F
Sbjct: 57 VMNNTRVLPARLYGEK----TDTHGHVELLLLKNTQGDQWEVLAKPAKRLKVGSQVNF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G L+AT+ID+ G ++ FS GI LE SL G +PLPPYI K D
Sbjct: 111 --GDGHLKATIIDELEHGGRIVEFSYDGIFLEVLESL-GEMPLPPYIHEK----LEDAER 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT++LL ++ + G+ + ++TLHVG GTF PV V++ D+H
Sbjct: 164 YQTVYAKENGSAAAPTAGLHFTTDLLKKIEAKGVHLVYLTLHVGLGTFRPVSVDNLDEHD 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MHSE + AQ L VK GGR+V+VGTTS+R LET ++ G I SG+TNIFI
Sbjct: 224 MHSEFYSLSEEAAQTLRDVKQAGGRVVAVGTTSIRTLETIGSKFQGDIQADSGWTNIFIK 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY+F+ VD +NFHLPKSTL+MLVSAF G + + Y+HA+ YRF+S+GD
Sbjct: 284 PGYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYRHAVDEKYRFFSFGD 337
>gi|307266566|ref|ZP_07548098.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter wiegelii Rt8.B1]
gi|306918420|gb|EFN48662.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter wiegelii Rt8.B1]
Length = 341
Score = 279 bits (714), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 148/359 (41%), Positives = 212/359 (59%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M EF F+LP IA P+ R S+RLMV++ + + ++ +L + D +V
Sbjct: 1 MKRSEFYFELPEELIAQEPLEDRSSSRLMVLNRKTGE---VQHDIFKNITKYLKAGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREK---EISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
N+TKVI A+L I RR+ +I L R+S N W +P + K G + F
Sbjct: 58 LNDTKVIPARL-------IGRRQDSGGKIEFVLLKRLSVNEWETLVKPGRRAKVGTRVVF 110
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
G L A ++D G ++ F G+ E + +G +P+PPYI +K +D
Sbjct: 111 ----GNGELVAEILDNTEVGGRVVRFYYEGV-FEEVLDKLGEMPVPPYIKKK----LKDK 161
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YAK +GS AAPTAGLHFT LL ++ +G+K F+TLHVG GTF PVK E ++
Sbjct: 162 ERYQTVYAKYEGSAAAPTAGLHFTEELLEKIRQMGVKTVFITLHVGLGTFRPVKEEIIEN 221
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH E + A+ +N+ + +GGR+++VGTTS R LET E+G I SG+T+IFI
Sbjct: 222 HKMHEEFYIVTKEAAEEINATREKGGRVIAVGTTSTRTLETVADENGYIREKSGWTDIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+F+A+D +++NFHLP+STL+M+VSAF G E + YQ AI YRF+S+GD L+
Sbjct: 282 YPGYKFKAIDGMITNFHLPESTLIMMVSAFAGKENIMRAYQVAIEERYRFFSFGDAMLI 340
>gi|152976836|ref|YP_001376353.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus subsp. cytotoxis NVH 391-98]
gi|189038510|sp|A7GTA0|QUEA_BACCN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|152025588|gb|ABS23358.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Bacillus
cytotoxicus NVH 391-98]
Length = 350
Score = 279 bits (714), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 158/357 (44%), Positives = 213/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I SD+ A+L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQTPLEKRETSRLMVLDRETGD---IEHKHFSDILAYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + ++W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDTWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 111 -GEGKLKATCVGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+K+ F+TLHVG GTF PV + +DH M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLQQKGVKLAFITLHVGLGTFRPVSTDKIEDHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET TE DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSQETADLLNDVKVNGGRIITVGTTSTRTLETIATEHDGKLCGASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF G E Y A+ YRF+S+GD L
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFAGRENVLHAYNEAVKEKYRFFSFGDAMFL 341
>gi|228478265|ref|ZP_04062873.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus salivarius SK126]
gi|228249944|gb|EEK09214.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus salivarius SK126]
Length = 347
Score = 279 bits (714), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 160/355 (45%), Positives = 219/355 (61%), Gaps = 21/355 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVIS--DHLVSDLPAFLNSNDA 58
M +FDF+LP IA P+ RD+++L+V+ P ++ + + DH++ L N DA
Sbjct: 1 MNTNDFDFELPEELIAQTPLEQRDASKLLVIDP-VTKEMTDTHFDHIIDQL----NPGDA 55
Query: 59 IVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
+V NNT+V+ A+L G + + L + W V A+P+K +K G + F
Sbjct: 56 LVMNNTRVLPARLYGEK----PDTHGHVEFLLLKNTQGDQWEVLAKPAKRLKVGAKVSF- 110
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
G RL ATV ++ + G ++ F+ GI LE SL G +PLPPYI K ++ RD
Sbjct: 111 ---GDGRLTATVTEELDHGGRIVEFNYDGIFLEVLESL-GEMPLPPYIHEK--LEDRDR- 163
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ D+H
Sbjct: 164 -YQTVYAKENGSAAAPTAGLHFTPELLQKIEAKGVKLVYLTLHVGLGTFRPVSVDNVDEH 222
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFI 297
MHSE + A LNSVK+ GGRI++VGTTS+R LET + DG + SG+TNIFI
Sbjct: 223 EMHSEFYTLSQDAADTLNSVKAAGGRIIAVGTTSIRTLETIGNKYDGQLQADSGWTNIFI 282
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY+F VD +NFHLPKSTL+MLVSAF G E Y+HA+ YRF+S+GD
Sbjct: 283 KPGYQFTVVDAFSTNFHLPKSTLVMLVSAFAGREFVLDAYKHAVQERYRFFSFGD 337
>gi|224476737|ref|YP_002634343.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus carnosus subsp. carnosus TM300]
gi|222421344|emb|CAL28158.1| putative S-adenosylmethionine tRNA ribosyltransferase
[Staphylococcus carnosus subsp. carnosus TM300]
Length = 341
Score = 279 bits (714), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 150/356 (42%), Positives = 213/356 (59%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EFD+DLP IA P+ RD++RL+V+H + D+ ++NS D +V
Sbjct: 1 MNIEEFDYDLPEELIAQTPLKDRDTSRLLVLHKENGE---LEHRHFKDIIEYINSGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L GV+ + ++ + ++ + W V +P+K IK G L F
Sbjct: 58 LNDTKVMPARLFGVK----QETKAKVEMLMLTQIEGDDWEVLLKPAKRIKVGQKLSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ ++EA I++ + G ++ S GI L+ ++ +G +PLPPYI + D Y
Sbjct: 111 -GEGKIEAECIEELDQGGRIMRLSYEGI-LQERLDELGEMPLPPYIKER----LEDQDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL L + G+ + F+TLHVG GTF PV V++ DDH M
Sbjct: 165 QTVYAKATGSAAAPTAGLHFTDELLDELKAKGVNLAFITLHVGLGTFRPVSVDNIDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN K G RI+SVGTTS R LET + SG+T+IFI PG
Sbjct: 225 HSEYYQMTQETADLLNQTKQNGKRIISVGTTSTRTLETIRRDYDTFTAASGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ F+A+D L++NFHLPKSTL+MLVSAF + Y+ A+ YRF+S+GD L+
Sbjct: 285 FEFKAIDGLITNFHLPKSTLVMLVSAFSSRQYILNAYRTAVEMKYRFFSFGDAMLI 340
>gi|89895210|ref|YP_518697.1| hypothetical protein DSY2464 [Desulfitobacterium hafniense Y51]
gi|219669641|ref|YP_002460076.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Desulfitobacterium hafniense DCB-2]
gi|122482413|sp|Q24UN9|QUEA_DESHY RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|254764274|sp|B8FQV3|QUEA_DESHD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|89334658|dbj|BAE84253.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219539901|gb|ACL21640.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfitobacterium hafniense DCB-2]
Length = 341
Score = 279 bits (713), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 151/357 (42%), Positives = 212/357 (59%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++FDF+LP RIA PV PRDS+RLMV++ I + +LP L + D +V
Sbjct: 1 MKLEDFDFELPEDRIAQHPVEPRDSSRLMVMN---RWTGEIEHRVFRELPELLQAGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G + + +I C L R + W +P K +K G + F
Sbjct: 58 VNNTRVIPARLIGEK----EGTQAKIECLLLTRRDKDVWETLIKPGKRLKAGQTVVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L +++ G L+ F+ GI E + +G +PLPPYI + +D Y
Sbjct: 111 -GDGLLRGELLEILPDGNRLVRFNYQGI-FEEVLDQLGNMPLPPYITEQ----LQDKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL RL G+++ + LHVG GTF PVKVE+ ++H M
Sbjct: 165 QTIYAKESGSAAAPTAGLHFTPELLERLQDKGVEIVEILLHVGLGTFRPVKVENVEEHTM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ +N KS+G R+++VGTT+ R LE+ E+G I G+T+I+I PG
Sbjct: 225 HSEYYRVTPDAAERINRAKSQGRRVIAVGTTASRTLESVAGENGRIEGKEGWTDIYIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+ +D L++NFH PKSTL+MLVSA G ++ K YQ AI+ YRFYS+GD ++
Sbjct: 285 YTFKILDGLITNFHFPKSTLVMLVSALAGRDQILKAYQIAIAEGYRFYSFGDAMMIL 341
>gi|118444595|ref|YP_877907.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
novyi NT]
gi|118135051|gb|ABK62095.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
novyi NT]
Length = 344
Score = 279 bits (713), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 154/354 (43%), Positives = 204/354 (57%), Gaps = 16/354 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
VK+FDF LP IA P+ RD +RLMVV I + D+ +LN D +V N
Sbjct: 6 VKDFDFYLPQELIAQHPMEKRDESRLMVVDRKSGQ---IEHKIFRDILGYLNEGDCLVLN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NT+V+ A+L G + +I L R+ ++W +P K K G F G
Sbjct: 63 NTRVLPARLIGEK----ENTGGKIEFLLLRRIEGDTWETLVKPGKKAKIGARFVF----G 114
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
L+A V G ++ F GI E + +G +PLPPYI + D YQT
Sbjct: 115 SGELKAEVKSMGEDGSRIIEFEYEGI-FEEVLDKLGQMPLPPYITER----LEDKERYQT 169
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
Y+K +GS AAPTAGLHFT LL + GIK+ FVTLHVG GTF PVKVE+ ++H MHS
Sbjct: 170 VYSKEKGSAAAPTAGLHFTEELLKEIKEKGIKIAFVTLHVGLGTFRPVKVENIEEHHMHS 229
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E + TA +N+ K GG+I++VGTTS R LET EDG + SG+T+IF+ PGY+
Sbjct: 230 EYYTMSKETADIINNTKENGGKIIAVGTTSCRTLETIGDEDGKVRETSGWTDIFMYPGYK 289
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
F+ VD L++NFHLP+STLLMLVSAF E Y+ A+ + YRF+S+GD L
Sbjct: 290 FKVVDRLITNFHLPQSTLLMLVSAFSSRENIMNAYKEAVKNKYRFFSFGDAMFL 343
>gi|83590531|ref|YP_430540.1| S-adenosylmethionine [Moorella thermoacetica ATCC 39073]
gi|123524237|sp|Q2RHU2|QUEA_MOOTA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|83573445|gb|ABC19997.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Moorella
thermoacetica ATCC 39073]
Length = 342
Score = 279 bits (713), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 156/357 (43%), Positives = 217/357 (60%), Gaps = 15/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EFD++LPP +IA +PV PRD++RL+V+H + DLP +L+ D +V
Sbjct: 1 MRIEEFDYELPPGQIAQQPVEPRDASRLLVLHREGGF---LEHRHFYDLPRYLHPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKVI A+L G R +I L R ++W RP + + G L F
Sbjct: 58 VNETKVIPARLWGYRAG----TGAKIEVLLLTRQEGDTWETLVRPGRRVPVGAELIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L+A V G ++ FS E + +G +PLPPYI +++P D Y
Sbjct: 111 -GRGELQARVKGVTPAGGRIMEFSYQEGPWEALLERLGEMPLPPYI-KEKPADPGRY--- 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +GS AAPTAGLHFT LL L GI++ + LHVG GTF PVKVE+ +H+M
Sbjct: 166 QTVYAREEGSAAAPTAGLHFTPRLLKELREQGIEIASILLHVGLGTFRPVKVENIQEHVM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + A +N+ ++RG R+V+VGTT +R LET T DG+I+ SG+T+IFI PG
Sbjct: 226 HAEYYAVTPAAAATINAARARGHRVVAVGTTVVRTLETVATADGVIHAGSGWTDIFIYPG 285
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YRF+A+D L++NFHLP+STLLMLVSAF G E+ Y+ A+ YRFYS+GD L+
Sbjct: 286 YRFKAIDSLITNFHLPRSTLLMLVSAFAGREKILDAYRVAVREGYRFYSFGDAMLIL 342
>gi|15675321|ref|NP_269495.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes M1 GAS]
gi|71910953|ref|YP_282503.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS5005]
gi|21263910|sp|Q99Z49|QUEA_STRP1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|13622501|gb|AAK34216.1| putative S-adenosylmethionine-tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes M1 GAS]
gi|71853735|gb|AAZ51758.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS5005]
Length = 342
Score = 278 bits (712), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 158/354 (44%), Positives = 214/354 (60%), Gaps = 19/354 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
M FDF+LP IA P+ RDS++L+++ H + DH++ L N DA+
Sbjct: 1 MNTNNFDFELPEELIAQTPLEKRDSSKLLIIDHRQKTMVDSHFDHIIDQL----NPGDAL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V NNT+V+ A+L G + + L + W V A+P+K +K G ++F
Sbjct: 57 VMNNTRVLPARLYGEK----PDTHGHVELLLLKNTQGDQWEVLAKPAKRLKVGSQVNF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G RL+AT+ID+ G ++ FS GI LE SL G +PLPPYI K D
Sbjct: 111 --GDGRLKATIIDELEHGGRIVEFSYDGIFLEVLESL-GEMPLPPYIHEK----LEDAER 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT++LL ++ + G+ + ++TLHVG GTF PV V++ D+H
Sbjct: 164 YQTVYAKENGSAAAPTAGLHFTTDLLKKIEAKGVHLVYLTLHVGLGTFRPVSVDNLDEHD 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MHSE + AQ L VK GGR+V+VGTTS+R LET + G I SG+TNIFI
Sbjct: 224 MHSEFYSLSEEAAQTLRDVKQAGGRVVAVGTTSIRTLETIGGKFQGDIQADSGWTNIFIK 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY+F+ VD +NFHLPKSTL+MLVSAF G + + Y+HA+ YRF+S+GD
Sbjct: 284 PGYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYRHAVDEKYRFFSFGD 337
>gi|259046888|ref|ZP_05737289.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Granulicatella adiacens ATCC 49175]
gi|259036511|gb|EEW37766.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Granulicatella adiacens ATCC 49175]
Length = 345
Score = 278 bits (712), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 157/350 (44%), Positives = 207/350 (59%), Gaps = 17/350 (4%)
Query: 4 KEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNN 63
K+FDFDLP IA P+ R S+RL++V I D SDL L + D +V NN
Sbjct: 6 KDFDFDLPEELIAQTPLKDRTSSRLLMVD---KTKHTIEDRHFSDLLEELEAGDTLVVNN 62
Query: 64 TKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQ 123
T+V+ A+L G + I L + W +P+K +K G ++ F G
Sbjct: 63 TRVLPARLYGTK----EETGAHIEVLLLTNTEGDKWETLVKPAKRMKVGSVVSF----GD 114
Query: 124 SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTT 183
RL+ATVI++ G ++ FS G+ LE SL G +PLPPYI + D YQT
Sbjct: 115 GRLKATVIEELEQGGRIIEFSYEGVFLEVLESL-GEMPLPPYIKER----LEDKERYQTV 169
Query: 184 YAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSE 243
YAK GS AAPTAGLHFT L+ ++ G+ + VTLHVG GTF PV V+ +DH MHSE
Sbjct: 170 YAKENGSAAAPTAGLHFTEELMQQIRDKGVNIVPVTLHVGLGTFRPVSVDSLEDHKMHSE 229
Query: 244 IGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITPGYR 302
+ TA + + K G R+++VGTTS+R LET A DG + P SG+T+IFI+PGY
Sbjct: 230 YYNVSKETADMIEATKKAGKRVIAVGTTSIRTLETVARDNDGHVVPASGWTDIFISPGYE 289
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
F VD ++NFHLPKSTL+MLVSA+ G E T + YQHAI YRF+S+GD
Sbjct: 290 FGVVDAFVTNFHLPKSTLVMLVSAYLGREFTLEAYQHAIEERYRFFSFGD 339
>gi|168187975|ref|ZP_02622610.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum C str. Eklund]
gi|169294189|gb|EDS76322.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum C str. Eklund]
Length = 341
Score = 278 bits (712), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 155/356 (43%), Positives = 204/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RD +RLMVV I + D+ +LN D +V
Sbjct: 1 MKVKDFDFYLPQELIAQHPMEKRDESRLMVVDRKSGQ---IEHKIFKDILGYLNKGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + +I L R+ ++W +P K K G F
Sbjct: 58 LNNTRVLPARLIGEK----ENTGGKIEFLLLKRIEGDTWETLVKPGKKAKIGARFVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A V G ++ F GI E + +G +PLPPYI + D Y
Sbjct: 111 -GSGELKAEVRAMGEDGSRIIEFEYEGI-FEEVLDKLGQMPLPPYITER----LEDRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL + GIK+ FVTLHVG GTF PVKVED + H M
Sbjct: 165 QTVYSKEKGSAAAPTAGLHFTEELLKEIKEKGIKIVFVTLHVGLGTFRPVKVEDIEKHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA+ +N+ K GG+I++VGTTS R LET E G + SG+T+IF+ PG
Sbjct: 225 HSEYYTMSKETAEIINNTKENGGKIIAVGTTSCRTLETIGDECGKVRETSGWTDIFMYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STLLMLVSAF E Y+ A+ + YRF+S+GD L
Sbjct: 285 YKFKVVDRLITNFHLPQSTLLMLVSAFSTRENIMNAYKEAVENKYRFFSFGDAMFL 340
>gi|253681405|ref|ZP_04862202.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum D str. 1873]
gi|253561117|gb|EES90569.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum D str. 1873]
Length = 341
Score = 278 bits (712), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 202/356 (56%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RD +RLMVV I + D+ + N D +V
Sbjct: 1 MKVKDFDFYLPEELIAQHPMEKRDESRLMVVDRKSGH---IEHKIFKDILGYFNEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + +I L R+ + W +P K K G F
Sbjct: 58 LNNTRVLPARLIGEK----ENTGGKIEFLLLKRIEGDKWETLVKPGKKAKIGARFVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A V G ++ F GI E + +G +PLPPYI K R Y
Sbjct: 111 -GSGELKAEVKGMGEDGSRIIEFEYEGI-FEEVLDKLGQMPLPPYITEKLDDKER----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL + + G+K+ FVTLHVG GTF PVKVED ++H M
Sbjct: 165 QTVYSKEKGSAAAPTAGLHFTKELLKEIENKGVKIAFVTLHVGLGTFRPVKVEDIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA +N K GG++++VGTTS R LET E+G + SG+T+IF+ PG
Sbjct: 225 HSEYYTMSKETADIINKTKENGGKVIAVGTTSCRTLETIGDENGKVKETSGWTDIFMYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STLLMLVSAF E Y+ A+ YRF+S+GD L
Sbjct: 285 YKFKIVDRLITNFHLPQSTLLMLVSAFSSRENIMNAYKEAVDEKYRFFSFGDAMFL 340
>gi|94990719|ref|YP_598819.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS10270]
gi|166218747|sp|Q1JG69|QUEA_STRPD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|94544227|gb|ABF34275.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS10270]
Length = 342
Score = 278 bits (711), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 157/354 (44%), Positives = 215/354 (60%), Gaps = 19/354 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
M +FDF+LP IA P+ RDS++L+++ H + DH++ L N DA+
Sbjct: 1 MNTNDFDFELPEELIAQTPLEKRDSSKLLIIDHRQKTMVDSHFDHIIDQL----NPGDAL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V NNT+V+ A+L G + + L + W V A+P+K +K G ++F
Sbjct: 57 VMNNTRVLPARLYGEK----PDTHGHVELLLLKNTQGDQWEVLAKPAKRLKVGSQVNF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G L+AT+ID+ G ++ FS GI LE SL G +PLPPYI K D
Sbjct: 111 --GNGHLKATIIDELEHGGRIVEFSYDGIFLEVLESL-GEMPLPPYIHEK----LEDAER 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT++LL ++ + G+ + ++TLHVG GTF PV V++ D+H
Sbjct: 164 YQTVYAKENGSAAAPTAGLHFTTDLLKKIEAKGVHLVYLTLHVGLGTFRPVSVDNLDEHD 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MHSE + AQ L VK GGR+V+VGTTS+R LET ++ G I SG+TNIFI
Sbjct: 224 MHSEFYSLSEEAAQTLRDVKQAGGRVVAVGTTSIRTLETIGSKFQGDIQADSGWTNIFIK 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY+F+ VD +NFHLPKSTL+MLVSAF G + + Y+HA+ YRF+S+GD
Sbjct: 284 PGYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYRHAVDEKYRFFSFGD 337
>gi|324995358|gb|EGC27270.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK678]
Length = 342
Score = 278 bits (711), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 158/353 (44%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV SD + L DA+V
Sbjct: 1 MNTADFDFDLPEELIAQTPLEKRDASRLLVVDKETGA---FSDQHFDQIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGIK----PETGGHVELLLLKNTKGDDWEVLAKPAKRLRVGAQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+++ + G ++ F GI LE SL G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVVEELDHGGRIVRFGYEGIFLEVLESL-GEMPLPPYIHEKLA----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V+ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLEQIAAKGVKLVYLTLHVGLGTFRPVSVDSLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK GGR+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRQVKVNGGRVIAVGTTSIRTLETIGSKFQGQIQADSGWTNIFIRP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY ++ VD +NFHLPKSTL+MLVSAF G T + Y+HAI+ YRF+S+GD
Sbjct: 285 GYNWKIVDAFSTNFHLPKSTLVMLVSAFAGRSLTLEAYEHAIAERYRFFSFGD 337
>gi|310643556|ref|YP_003948314.1| s-adenosylmethionine:tRNA ribosyltransferase-isomerase, (queuosine
biosynthesis protein) [Paenibacillus polymyxa SC2]
gi|309248506|gb|ADO58073.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase, (Queuosine
biosynthesis protein) [Paenibacillus polymyxa SC2]
Length = 342
Score = 278 bits (711), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 149/359 (41%), Positives = 217/359 (60%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V ++DF+LP + IA P+ R ++RL+ ++ N + H SD+ +L D +V
Sbjct: 1 MNVNDYDFELPETLIAQTPLLERTASRLLTLNKNNGE---VGHHTFSDIVQYLQPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G++ + E L ++ + W +P K +KKG ++ F +
Sbjct: 58 LNDTRVIPARLFGIKQDTGAKAE----VLLLKQLEGDRWEALVKPGKKLKKGAVIVFGDE 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L+A + ++ + G +L FS GI + + +G +PLPPYI K +D R+ Y
Sbjct: 114 -----LKAVIEEEGDMGGRVLSFSYDGI-FQEILDRLGQMPLPPYI--KEQLDDRER--Y 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +GS AAPTAGLHFT LL R+ G+ V F+TLHVG GTF P+ V+ ++H+M
Sbjct: 164 QTVYARHEGSAAAPTAGLHFTEELLDRIKEKGVTVAFITLHVGLGTFRPMSVDTIEEHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE--DGIINPWSGFTNIFIT 298
H E + TA LN+ K+RGGR+V+VGTTS R LET + DG++ SG+T IFI
Sbjct: 224 HEEYYSLSQETADVLNATKARGGRVVAVGTTSCRTLETVGSNFVDGVLQASSGWTQIFIY 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY FR VD +++NFHLPKSTL+MLVSA G + YQ AI YRF+S+GD ++
Sbjct: 284 PGYEFRVVDAMITNFHLPKSTLVMLVSALAGRKNIMHAYQEAIDQKYRFFSFGDAMFIY 342
>gi|306833044|ref|ZP_07466176.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus bovis ATCC 700338]
gi|304424943|gb|EFM28077.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus bovis ATCC 700338]
Length = 342
Score = 278 bits (711), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 160/354 (45%), Positives = 218/354 (61%), Gaps = 19/354 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
M +FDF+LP IA P+ RDS++L+V+ H DH++ +L N DA+
Sbjct: 1 MNTNDFDFNLPEELIAQTPLEKRDSSKLLVIDHKTHEMVDAHFDHILDEL----NPGDAL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V NNT+V+ A+L G + + L + W V A+P+K ++ G + F
Sbjct: 57 VMNNTRVLPARLYGEK----PDTHGHVELLLLKNTQGDQWEVLAKPAKRLRVGVKVSF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G RL ATV+++ + G ++ F+ GI LE SL G +PLPPYI K +D D
Sbjct: 111 --GDGRLTATVVEELDHGGRVVEFAYDGIFLEVLESL-GEMPLPPYIHEK--LDDPDR-- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT +LL+++ + G+K+ ++TLHVG GTF PV V++ ++H
Sbjct: 164 YQTVYAKENGSAAAPTAGLHFTQDLLAKIEAKGVKLVYLTLHVGLGTFRPVSVDNIEEHE 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MHSE + AQ L VK+ GGR+V+VGTTS+R LET ++ +G I SG+TNIFI
Sbjct: 224 MHSEFYTLSEEAAQTLRDVKAAGGRVVAVGTTSIRTLETIGSKFNGDIKADSGWTNIFIK 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY F+ VD +NFHLPKSTL+MLVSAF G E YQHAI YRF+S+GD
Sbjct: 284 PGYEFKVVDAFSTNFHLPKSTLVMLVSAFAGREFVLDAYQHAIDEHYRFFSFGD 337
>gi|21910602|ref|NP_664870.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS315]
gi|25091088|sp|Q8K6Z3|QUEA_STRP3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|21904803|gb|AAM79673.1| putative S-adenosylmethionine-tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS315]
Length = 342
Score = 278 bits (711), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 157/354 (44%), Positives = 215/354 (60%), Gaps = 19/354 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
M +FDF+LP IA P+ RDS++L+++ H + DH++ L N DA+
Sbjct: 1 MNTNDFDFELPEELIAQTPLEKRDSSKLLIIDHRQKTMVDSHFDHIIDQL----NPGDAL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V NNT+V+ A+L G + + L + W V A+P+K +K G ++F
Sbjct: 57 VMNNTRVLPARLYGEK----PDTHGHVELLLLKNTQGDQWEVLAKPAKRLKVGSQVNF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G L+AT+ID+ G ++ FS GI LE SL G +PLPPYI K D
Sbjct: 111 --GDGHLKATIIDELEHGGRIVEFSYDGIFLEVLESL-GEMPLPPYIHEK----LEDAER 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT++LL ++ + G+ + ++TLHVG GTF PV V++ D+H
Sbjct: 164 YQTVYAKENGSAAAPTAGLHFTTDLLKKIEAKGVHLVYLTLHVGLGTFRPVSVDNLDEHD 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MHSE + AQ L VK GGR+V+VGTTS+R LET ++ G I SG+TNIFI
Sbjct: 224 MHSEFYSLSEEAAQTLRDVKQAGGRVVAVGTTSIRTLETIGSKFQGDIQADSGWTNIFIK 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY+F+ VD +NFHLPKSTL+MLVSAF G + + Y+HA+ YRF+S+GD
Sbjct: 284 PGYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYRHAVDEKYRFFSFGD 337
>gi|327468945|gb|EGF14417.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK330]
Length = 342
Score = 278 bits (711), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 159/353 (45%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV V SD + L DA+V
Sbjct: 1 MNTADFDFDLPEELIAQTPLEKRDASRLLVVDKETG---VFSDQHFDQIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGIK----PETGGHVELLLLKNTQGDDWEVLAKPAKRLRVGAQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATVI++ G ++ F GI LE SL G +PLPPYI K R Y
Sbjct: 111 -GDGRLTATVIEELEHGGRIVRFGYEGIFLEVLESL-GEMPLPPYIHEKLADRER----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V+ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLEQIAAKGVKLVYLTLHVGLGTFRPVSVDSLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ GG +++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRQVKANGGHVIAVGTTSIRTLETIGSKFQGQIEADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY ++ VD +NFHLPKSTL+MLVSAF G T + Y+HAI+ YRF+S+GD
Sbjct: 285 GYDWKIVDAFSTNFHLPKSTLVMLVSAFAGRSLTLEAYEHAIAERYRFFSFGD 337
>gi|324993331|gb|EGC25251.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK405]
Length = 342
Score = 278 bits (711), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 157/354 (44%), Positives = 208/354 (58%), Gaps = 17/354 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV SD + L DA+V
Sbjct: 1 MNTADFDFDLPEELIAQAPLEKRDASRLLVVDKETGA---FSDQHFDQIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGIK----PETGGHVELLLLKNIQDDDWEVLAKPAKRLRVGAQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+D+ G ++ F GI LE SL G +PLPPYI K R Y
Sbjct: 111 -GDGRLTATVVDELEHGGRIVRFGYEGIFLEVLESL-GEMPLPPYIHEKLADRER----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+ + ++TLHVG GTF PV V+ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLEQIAAKGVNLVYLTLHVGLGTFRPVSVDSLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L VK+ GGR+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAHTLRQVKANGGRVIAVGTTSIRTLETIGSKFQGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
GY ++ VD +NFHLPKSTL+MLVSAF G T + Y+HAI+ YRF+S+GD
Sbjct: 285 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRSLTLEAYEHAIAERYRFFSFGDA 338
>gi|319947352|ref|ZP_08021585.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus australis ATCC 700641]
gi|319746594|gb|EFV98854.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus australis ATCC 700641]
Length = 342
Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 157/354 (44%), Positives = 211/354 (59%), Gaps = 17/354 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++++ + D + L DA+V
Sbjct: 1 MNTNDFDFHLPEELIAQTPLEKRDASKLLILNRQTGQ---MEDQHFDAIINELEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L+GV+ + L + + W V A+P+K +K+G ++ F
Sbjct: 58 MNNTRVLPARLHGVK----PDTGGHVELLLLKNIEGDQWEVLAKPAKRLKEGGVVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+AT+I K G ++ FS GI LE SL G +PLPPYI K D Y
Sbjct: 111 -GDGRLQATLIKKLEHGGCIVEFSYQGIFLEVLESL-GEMPLPPYIHEK----LEDQERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ G+ + ++TLHVG GTF PV V++ D H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTPELLQKIEDKGVHLVYLTLHVGLGTFRPVSVDNLDQHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ G RIV+VGTTS+R LET + +G + SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAQTLRQVKASGHRIVAVGTTSIRTLETIGNKFNGELQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
GY+++ VD +NFHLPKSTL+MLVSAF G E T YQHAI YRF+S+GD
Sbjct: 285 GYQWQVVDAFSTNFHLPKSTLVMLVSAFAGRELTLNAYQHAIDQGYRFFSFGDA 338
>gi|308070377|ref|YP_003871982.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein queA) [Paenibacillus polymyxa E681]
gi|305859656|gb|ADM71444.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein queA) [Paenibacillus polymyxa E681]
Length = 342
Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 149/359 (41%), Positives = 217/359 (60%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V ++DF+LP + IA P+ R ++RL+ ++ N + H SD+ +L D +V
Sbjct: 1 MNVNDYDFELPETLIAQTPLLDRSASRLLTLNKNNGE---VGHHTFSDIVQYLQPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G++ + E L ++ + W +P K +KKG ++ F +
Sbjct: 58 LNDTRVIPARLFGIKEDTGAKAE----VLLLKQLQGDRWKALVKPGKKLKKGAVIVFGDE 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L+A + ++ + G +L FS GI + ++ +G +PLPPYI K +D R+ Y
Sbjct: 114 -----LKAVIEEEGDMGGRVLSFSYDGI-FQEILNRLGQMPLPPYI--KEQLDDRER--Y 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +GS AAPTAGLHFT LL ++ G+ V F+TLHVG GTF P+ V+ ++H+M
Sbjct: 164 QTVYARHEGSAAAPTAGLHFTEELLDQIKKKGVTVAFITLHVGLGTFRPMSVDTIEEHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE--DGIINPWSGFTNIFIT 298
H E + TA LN K+RGGR+V+VGTTS R LET + DG++ SG+T IFI
Sbjct: 224 HEEYYSLSQETADVLNETKARGGRVVAVGTTSCRTLETVGNKFLDGVLEASSGWTQIFIY 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY FR VD +++NFHLPKSTL+MLVSA G E YQ AI YRF+S+GD ++
Sbjct: 284 PGYEFRVVDAMITNFHLPKSTLVMLVSALAGRENIMHAYQEAIDRQYRFFSFGDAMFIY 342
>gi|149202089|ref|ZP_01879062.1| Queuosine biosynthesis protein [Roseovarius sp. TM1035]
gi|149144187|gb|EDM32218.1| Queuosine biosynthesis protein [Roseovarius sp. TM1035]
Length = 362
Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 163/358 (45%), Positives = 226/358 (63%), Gaps = 13/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP + IA RP PR +ARL+V I+D V+DL +L D +V
Sbjct: 1 MKLSDFDFDLPEALIATRPARPRRAARLLVAEGE-----GITDAGVADLGRWLRPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRRE--KEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L+G+R + + +I TL + SW +P K + +G+ + F
Sbjct: 56 LNDTRVIPARLSGLRHRSGAQGDTAAKIEVTLLEPGADGSWGALIKPLKKVSEGEEIVF- 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
RL A ++ K G+ L F++ G + + ++ G +PLPPYIA +RP D +D V
Sbjct: 115 ----SERLSAVLLAK-EEGQGRLRFNLVGDDFDAALAEAGAMPLPPYIAARRPADEQDKV 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LL+ L ++G+ VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVWARAPGAVAAPTASLHFDEALLAELAALGVGFSHVTLHVGAGTFLPVKVEDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A A + + ++ GGRI+ VGTT+LRL+ETA G I WSG T+IFI
Sbjct: 230 RMHAEWGEVSAKAAAEMAATRAAGGRIIPVGTTALRLIETAARATGEIAAWSGDTDIFIY 289
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PG+ FR D LM+NFHLPKSTL+MLVSA G + +++Y HA++ YRF+SYGD SLL
Sbjct: 290 PGFEFRVADALMTNFHLPKSTLMMLVSALMGQDTIRRIYAHAVAARYRFFSYGDASLL 347
>gi|283795917|ref|ZP_06345070.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
sp. M62/1]
gi|291076554|gb|EFE13918.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
sp. M62/1]
Length = 341
Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 152/356 (42%), Positives = 210/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+F FDLP IA P+ R S+RL+V+ + + D+ +LN D +V
Sbjct: 1 MDVKDFYFDLPQELIAQDPLEDRASSRLLVLDRSTG---EVEHRKFRDILEYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + + +I L R + W +P K K G ++ F
Sbjct: 58 INDTKVIPARLIGSK----EGTDAKIEVLLLKRKENDIWETLVKPGKKAKPGTVIRF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+ TV+D G L+ FS GI E + +G +PLPPYI + +D Y
Sbjct: 111 -GDGILKGTVVDVVEEGNRLIQFSYEGI-FEEILDQLGQMPLPPYITHQ----LKDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL + G+K+ VTLHVG GTF PVKVE+ DH M
Sbjct: 165 QTVYAKHEGSAAAPTAGLHFTKELLQEIEDRGVKIAHVTLHVGLGTFRPVKVENVLDHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +NS K GGR++ VGTTS R +E+A+ E+G++ SG+T+IFI PG
Sbjct: 225 HSEFYVVEKSEAEKINSTKREGGRVICVGTTSCRTIESASDENGVLKAGSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YQFKILDCLITNFHLPESTLVMLVSALAGREHVLAAYEEAVKERYRFFSFGDAMFI 340
>gi|295090985|emb|CBK77092.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Clostridium cf. saccharolyticum K10]
Length = 341
Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 152/356 (42%), Positives = 210/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+F FDLP IA P+ R S+RL+V+ + + D+ +LN D +V
Sbjct: 1 MDVKDFYFDLPQELIAQDPLEDRASSRLLVLDRSTG---EVEHRKFRDILEYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + + +I L R + W +P K K G ++ F
Sbjct: 58 INDTKVIPARLIGSK----EGTDAKIEVLLLKRKENDIWETLVKPGKKAKPGTVIRF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+ TV+D G L+ FS GI E + +G +PLPPYI + +D Y
Sbjct: 111 -GDGILKGTVVDVVEEGNRLIQFSYEGI-FEEILDQLGQMPLPPYITHQ----LKDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL + G+K+ VTLHVG GTF PVKVE+ DH M
Sbjct: 165 QTVYAKHEGSAAAPTAGLHFTKELLQEIEDRGVKIAHVTLHVGLGTFRPVKVENVLDHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +NS K GGR++ VGTTS R +E+A+ E+G++ SG+T+IFI PG
Sbjct: 225 HSEFYVVEESEAEKINSTKREGGRVICVGTTSCRTIESASDENGVLKAGSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YQFKILDCLITNFHLPESTLVMLVSALAGREHVLAAYEEAVKERYRFFSFGDAMFI 340
>gi|150016410|ref|YP_001308664.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
beijerinckii NCIMB 8052]
gi|189038514|sp|A6LTM8|QUEA_CLOB8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|149902875|gb|ABR33708.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Clostridium beijerinckii NCIMB 8052]
Length = 341
Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 150/356 (42%), Positives = 204/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RDS+RLMV+ I D+ +LN D +V
Sbjct: 1 MNVKDFDFYLPEELIAQHPLEQRDSSRLMVLDKKTGE---IKHKKFHDIIEYLNEGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + I L R+ + W A+P K K G F
Sbjct: 58 LNNTRVMPARLIGEKEGTGGK----IEFLLLKRIEKDRWECLAKPGKSAKVGRKFTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+A V++ G ++ F GI E + +G +PLPPYI + D Y
Sbjct: 111 -GEGKLKAEVVEVEENGNRIVEFFYDGI-FEEVLDSLGEMPLPPYIHER----LEDRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT LL + + GI + ++TLHVG GTF PVKVE ++H M
Sbjct: 165 QTVYSKENGSAAAPTAGLHFTKELLQEIKNKGINIVYLTLHVGLGTFRPVKVESLEEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + +A +N K RG ++SVGTTS R LET E+G + SG+TNIFI PG
Sbjct: 225 HSEFYMLSKESADIINETKKRGNAVISVGTTSTRTLETIGDENGFVKEQSGWTNIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STL+MLVS G E Y+ A++ YRF+S+GD +
Sbjct: 285 YKFKVVDKLITNFHLPESTLIMLVSTLAGRENVMNAYEEAVNEKYRFFSFGDAMFI 340
>gi|325688305|gb|EGD30324.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK72]
Length = 342
Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 157/354 (44%), Positives = 210/354 (59%), Gaps = 17/354 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV SD + L DA+V
Sbjct: 1 MNTADFDFDLPEELIAQTPLEKRDASRLLVVDKETGA---FSDQHFDQIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGIK----PETGGHVELLLLKNTKGDDWEVLAKPAKRLRVGAQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+++ + G ++ F GI LE SL G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVVEELDHGGRIVRFGYEGIFLEVLESL-GEMPLPPYIHEKLA----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V+ +DH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLEQIAAKGVKLVYLTLHVGLGTFRPVSVDSLEDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ GGR+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQILRQVKANGGRVIAVGTTSIRTLETIGSKFQGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
GY ++ VD +NFHLPKSTL+MLVSAF G T + Y+HAI+ YRF+S+GD
Sbjct: 285 GYNWKIVDAFSTNFHLPKSTLVMLVSAFAGRSLTLEAYEHAIAERYRFFSFGDA 338
>gi|302385235|ref|YP_003821057.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Clostridium
saccharolyticum WM1]
gi|302195863|gb|ADL03434.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Clostridium
saccharolyticum WM1]
Length = 349
Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 152/356 (42%), Positives = 210/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++F+F+LP IA P+ R ++RL+V+ + I D+ ++L D +V
Sbjct: 1 MNVRDFNFNLPQELIAQDPLEDRSASRLLVLDKHTG---EIQHRHFRDILSYLRKGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L GV+ E +I L R + W +P K K G ++ F
Sbjct: 58 INDTKVIPARLFGVK----EGTEAKIEILLLKRRENDIWETLVKPGKKAKMGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L+ TVID G L+ FS GI E + +G +PLPPYI + +D Y
Sbjct: 111 -GEGLLKGTVIDVVEEGNRLIQFSYEGI-FEEILDRLGQMPLPPYITHQ----LKDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL + +G+ + VTLHVG GTF PVKV++ + H M
Sbjct: 165 QTVYAKHEGSAAAPTAGLHFTKELLKEIEDMGVSIAHVTLHVGLGTFRPVKVDEIEAHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +N K GGRIV VGTTS R +E+A+ DG++ SG+T IFI PG
Sbjct: 225 HSEFYMVEEEEARKVNDAKKNGGRIVCVGTTSCRTVESASGSDGMLRAGSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF+ +D L++NFHLP+STL+MLVSA G + Y+ AI YRF+S+GD L
Sbjct: 285 YRFKLLDCLITNFHLPESTLVMLVSALAGRDHVLHAYEEAIKERYRFFSFGDAMFL 340
>gi|329116810|ref|ZP_08245527.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus parauberis NCFD 2020]
gi|326907215|gb|EGE54129.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus parauberis NCFD 2020]
Length = 342
Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 158/354 (44%), Positives = 216/354 (61%), Gaps = 19/354 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
M +FDFDLP IA P+ RDS++L+++ H + DH++ +L N DA+
Sbjct: 1 MNTNDFDFDLPEELIAQTPLEKRDSSKLLIIDHKKETMVDSHFDHIIKEL----NPGDAL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V NNT+V+ A+L G + + + L S + W V A+P+K ++ G + F
Sbjct: 57 VMNNTRVLPARLYGEK----PDTKGHVELLLLKNTSGDQWEVLAKPAKRLRVGSQVSF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G RL ATVI++ G ++ FS GI LE SL G +PLPPYI K R
Sbjct: 111 --GDGRLSATVIEELEHGGRIVEFSYDGIFLEVLESL-GEMPLPPYIHEKLEDSER---- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ D+H
Sbjct: 164 YQTVYAKENGSAAAPTAGLHFTQELLEKIEAKGVKLVYLTLHVGLGTFRPVSVDNVDEHD 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MHSE + A L VK+ GGR+++VGTTS+R LET ++ G I SG+TNIFI
Sbjct: 224 MHSEFYSLSEEAATTLRQVKADGGRVIAVGTTSIRTLETIGSKFKGEIVADSGWTNIFIK 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY+F VD +NFHLPKSTL+MLVSAF G + + Y+HA++ YRF+S+GD
Sbjct: 284 PGYQFTIVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYKHAVNEKYRFFSFGD 337
>gi|187933823|ref|YP_001885223.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum B str. Eklund 17B]
gi|238691636|sp|B2TMZ3|QUEA_CLOBB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|187721976|gb|ACD23197.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum B str. Eklund 17B]
Length = 341
Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 154/361 (42%), Positives = 207/361 (57%), Gaps = 26/361 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RD++RLMV+ IS D+ +LN D +V
Sbjct: 1 MNVKDFDFYLPEELIAQHPLEKRDTSRLMVLDKETGE---ISHKNFYDIIDYLNEGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKE-----ISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
NNT+V+ A+L G EKE I L RV + W A+P K + G
Sbjct: 58 LNNTRVMPARLIG---------EKEGTGGKIEFLLLKRVEKDRWECLAKPGKSARVGRRF 108
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
F G +L+A V++ + G ++ F GI E + +G +PLPPYI +
Sbjct: 109 TF----GDGKLKAEVVEVKDNGNRIVEFYYEGI-FEEVLDSLGEMPLPPYIHER----LE 159
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y+K GS AAPTAGLHFT LL ++ GI + +VTLHVG GTF PVKV+
Sbjct: 160 DRERYQTVYSKENGSAAAPTAGLHFTEELLHKIKDRGINIAYVTLHVGLGTFRPVKVDTI 219
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+DH MHSE + A+ +N+ K RG +++SVGTTS R LET EDG + +G+TNI
Sbjct: 220 EDHEMHSEYYHLSKEDAEVINATKKRGNKVISVGTTSTRTLETIADEDGNVKETNGWTNI 279
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGY+F+ VD L++NFHLP+STL+MLVS G E Y+ A+ YRF+S+GD
Sbjct: 280 FIYPGYKFKVVDRLITNFHLPESTLIMLVSTLAGKEHVMNAYEEAVKEKYRFFSFGDAMF 339
Query: 356 L 356
+
Sbjct: 340 I 340
>gi|52081250|ref|YP_080041.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
licheniformis ATCC 14580]
gi|52786630|ref|YP_092459.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
licheniformis ATCC 14580]
gi|319644783|ref|ZP_07999016.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
sp. BT1B_CT2]
gi|81609021|sp|Q65GP8|QUEA_BACLD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|52004461|gb|AAU24403.1| S-adenosylmethionine tRNA ribosyltransferase [Bacillus
licheniformis ATCC 14580]
gi|52349132|gb|AAU41766.1| QueA [Bacillus licheniformis ATCC 14580]
gi|317392592|gb|EFV73386.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
sp. BT1B_CT2]
Length = 342
Score = 277 bits (709), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 157/357 (43%), Positives = 211/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V+ FDFDLP IA P+ RD++RLMV+ I+ + FLN+ D IV
Sbjct: 1 MKVELFDFDLPERLIAQVPLKERDASRLMVLDKKTG---EITHSTFKHVIDFLNAGDCIV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L GV+ ++ L + + W +P+K +K+G +L F
Sbjct: 58 LNDTRVLPARLYGVK----EETGAKVEVLLLKQEEGDVWETLVKPAKRVKRGTVLSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A ++ G + F GI E SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLTAVCTEELEHGGRKIEFRYEGIFYEVLESL-GEMPLPPYI--KEQLDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K QGS AAPTAGLHFT +L L G+ + F+TLHVG GTF PV E+ ++H M
Sbjct: 165 QTVYSKKQGSAAAPTAGLHFTEEILDALREKGVHIAFITLHVGLGTFRPVSAENVEEHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
H+E + TA LN V+ GGRI+SVGTTS R LET +E DG SG+T+IFI P
Sbjct: 225 HAEFYEMSEETAALLNRVRQEGGRIISVGTTSTRTLETIASEHDGRFREASGWTSIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY FRA+D +++NFHLPKS+L+MLVSA G E Y+ A+ H YRF+S+GD L+
Sbjct: 285 GYTFRAIDGMITNFHLPKSSLIMLVSALAGREHVLSAYRTAVEHEYRFFSFGDAMLI 341
>gi|313890811|ref|ZP_07824436.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pseudoporcinus SPIN 20026]
gi|313120912|gb|EFR44026.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pseudoporcinus SPIN 20026]
Length = 342
Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 160/354 (45%), Positives = 211/354 (59%), Gaps = 19/354 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
M +FDF+LP IA P+ RDS++L+++ H + DH++ L N DA+
Sbjct: 1 MNTNDFDFELPEELIAQTPLEQRDSSKLLIIDHKAKTMVDSHFDHIIDQL----NPGDAL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V NNT+V+ A+L+G + + L + + W V A+P+K +K G + F
Sbjct: 57 VMNNTRVLPARLHGEK----PDTHGHVELLLLKNIQGDDWEVLAKPAKRLKVGSSISF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G RL ATVI + G ++ FS GI LE SL G +PLPPYI K R
Sbjct: 111 --GDGRLTATVIKELEHGGRIVSFSYQGIFLEVLESL-GEMPLPPYIHEKLDDSER---- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT LL ++ G+ + ++TLHVG GTF PV V++ D+H
Sbjct: 164 YQTVYAKENGSAAAPTAGLHFTQALLQKIQEKGVHLVYLTLHVGLGTFRPVSVDNVDEHE 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MHSE + A L VK GGR+V+VGTTS+R LET + +G I SG+TNIFI
Sbjct: 224 MHSEFYQLSEEAADTLRQVKKAGGRVVAVGTTSIRTLETIGNKFNGDIQADSGWTNIFIK 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGYRF VD +NFHLPKSTL+MLVSAF G E + Y+HAI+ YRF+S+GD
Sbjct: 284 PGYRFTVVDAFSTNFHLPKSTLVMLVSAFAGREFVLEAYKHAINEHYRFFSFGD 337
>gi|170761651|ref|YP_001788389.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum A3 str. Loch Maree]
gi|238688788|sp|B1L0B1|QUEA_CLOBM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|169408640|gb|ACA57051.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum A3 str. Loch Maree]
Length = 341
Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 152/364 (41%), Positives = 210/364 (57%), Gaps = 32/364 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RD ARL+V+ I + D+ +L ND +V
Sbjct: 1 MKVKDFDFYLPEELIAQHPMEKRDEARLLVLDKETG---EIEHKIFKDILDYLTPNDCLV 57
Query: 61 FNNTKVITAQLNGVR--------FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKG 112
NNT+V+ A+L G + F + R+EK++ W +P K + G
Sbjct: 58 LNNTRVLPARLIGAKEETGGKMEFLLLKRKEKDV------------WETLVKPGKRAQIG 105
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
F G L+A VI G ++ F GI E + +G +PLPPYI K +
Sbjct: 106 ARFIF----GNGELKAEVIGMGEEGSRIVKFYYEGI-FEEILDQLGQMPLPPYIKEK--L 158
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D ++ YQT Y+K +GS AAPTAGLHFT LL ++ G+K+ F+TLHVG GTF PVKV
Sbjct: 159 DDKEM--YQTVYSKEEGSAAAPTAGLHFTEELLKKIKEKGVKLAFLTLHVGLGTFRPVKV 216
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
ED +H+MHSE +D TA+ +N K +GGR+++VGTTS R LET +G + SG+
Sbjct: 217 EDIQEHVMHSEYYKMDKETAEIINDTKEKGGRVIAVGTTSCRTLETIGDIEGKVREQSGW 276
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFI PGY+++ VD L++NFHLP+STLLMLVSA G + Y A+ YRF+S+GD
Sbjct: 277 TDIFIYPGYKYKVVDALITNFHLPQSTLLMLVSALAGRDNIMNAYNVAVEKEYRFFSFGD 336
Query: 353 TSLL 356
+
Sbjct: 337 AMFI 340
>gi|323352665|ref|ZP_08087635.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis VMC66]
gi|322121701|gb|EFX93447.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis VMC66]
Length = 342
Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 157/353 (44%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV SD + L DA+V
Sbjct: 1 MNTADFDFDLPEELIAQTPLEKRDASRLLVVDKETGA---FSDQHFDQIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGIK----PETGGHVELLLLKNTQGDDWEVLAKPAKRLRVGSQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+++ + G ++ F GI LE SL G +PLPPYI K R Y
Sbjct: 111 -GDGRLTATVVEELDHGGRIVRFGYEGIFLEVLESL-GEMPLPPYIHEKLADRER----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V+ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLEQIAAKGVKLVYLTLHVGLGTFRPVSVDSLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ G R+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRQVKANGDRVIAVGTTSIRTLETIGSKFQGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY ++ VD +NFHLPKSTL+MLVSAF G T + Y+HAI+ YRF+S+GD
Sbjct: 285 GYDWKIVDAFSTNFHLPKSTLVMLVSAFAGRSLTLEAYEHAIAERYRFFSFGD 337
>gi|312866079|ref|ZP_07726300.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus downei F0415]
gi|311098483|gb|EFQ56706.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus downei F0415]
Length = 342
Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 158/354 (44%), Positives = 213/354 (60%), Gaps = 19/354 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVIS-DHLVSDLPAFLNSNDAI 59
M ++F+F LP IA P+ RDS++L+V+ N L DH++ +L N DA+
Sbjct: 1 MNTEDFNFHLPEDLIAQTPLEKRDSSKLLVIDHNKHTMLDSHFDHILEEL----NPGDAL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V NNT+V+ A+L+G + + L + W V A+P+K + G + F
Sbjct: 57 VMNNTRVLPARLHGEK----PETHGHVEFLLLKNTQGDQWEVLAKPAKRLHVGTEVSF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G RL ATV+++ G ++ F GI LE SL G +PLPPYI K D
Sbjct: 111 --GDGRLRATVLEELEHGGRIVQFHYEGIFLEVLESL-GEMPLPPYIHEK----LEDQEH 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ +DH
Sbjct: 164 YQTVYAKENGSAAAPTAGLHFTQELLEKIEAKGVKLVYLTLHVGLGTFRPVSVDNIEDHE 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MHSE AQ L VK+ GGRIV+VGTTS+R LET + +G I SG+TNIFI
Sbjct: 224 MHSEFYQFSEEAAQTLRQVKASGGRIVAVGTTSIRTLETIGNKFNGQIQADSGWTNIFIK 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY+F+ VD +NFHLPKSTL+MLVSAF G + + Y+HA+ YRF+S+GD
Sbjct: 284 PGYQFKLVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYKHAVEEHYRFFSFGD 337
>gi|326390116|ref|ZP_08211677.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter ethanolicus JW 200]
gi|325993764|gb|EGD52195.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter ethanolicus JW 200]
Length = 341
Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 147/359 (40%), Positives = 212/359 (59%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M EF F+LP IA P+ R S+RLMV++ + + ++ +L + D +V
Sbjct: 1 MKRSEFYFELPEELIAQEPLEDRSSSRLMVLNRKTGE---VQHDIFKNITKYLKAGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREK---EISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
N+TKVI A+L I RR+ +I L R+S N W +P + K G + F
Sbjct: 58 LNDTKVIPARL-------IGRRQDSGGKIEFVLLKRLSVNEWETLVKPGRRAKVGTRVVF 110
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
G L A ++D G ++ F G+ E + +G +P+PPYI +K +D
Sbjct: 111 ----GNGELVAEILDNTEVGGRVVRFYYEGL-FEEVLDKLGEMPVPPYIKKK----LKDK 161
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YAK +GS AAPTAGLHFT LL ++ +G+K F+TLHVG GTF PVK E ++
Sbjct: 162 ERYQTVYAKYEGSAAAPTAGLHFTEELLEKIRQMGVKTVFITLHVGLGTFRPVKEEIIEN 221
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH E + A+ +N+ + +GGR+++VGTTS R LET E+G I SG+T+IFI
Sbjct: 222 HKMHEEFYIVTKEAAEEINATREKGGRVIAVGTTSTRTLETVADENGYIREKSGWTDIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+F+A+D +++NFHLP+STL+M+VSAF G E + Y+ AI YRF+S+GD L+
Sbjct: 282 YPGYKFKAIDGMITNFHLPESTLIMMVSAFAGKENIMRAYKIAIEERYRFFSFGDAMLI 340
>gi|153940081|ref|YP_001392347.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum F str. Langeland]
gi|166216716|sp|A7GHT7|QUEA_CLOBL RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|152935977|gb|ABS41475.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum F str. Langeland]
gi|295320339|gb|ADG00717.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum F str. 230613]
Length = 341
Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 153/364 (42%), Positives = 209/364 (57%), Gaps = 32/364 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RD ARL+V+ I + D+ +L ND +V
Sbjct: 1 MKVKDFDFYLPEELIAQHPMEKRDEARLLVLDKETG---EIEHKIFKDILDYLTPNDCLV 57
Query: 61 FNNTKVITAQLNG--------VRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKG 112
NNT+V+ A+L G + F + R+EK++ W +P K + G
Sbjct: 58 LNNTRVLPARLIGSKEETGGKMEFLLLKRKEKDV------------WETLVKPGKRAQIG 105
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
F G LEA VI G ++ F GI E + +G +PLPPYI K +
Sbjct: 106 ARFIF----GNGELEAEVIGMGEEGSRIVKFYYEGI-FEEILDQLGQMPLPPYIKEK--L 158
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D ++ YQT Y+K +GS AAPTAGLHFT LL ++ G+K+ F+TLHVG GTF PVKV
Sbjct: 159 DDKEM--YQTVYSKEEGSAAAPTAGLHFTEELLKKIEEKGVKLAFLTLHVGLGTFRPVKV 216
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
ED +H+MHSE +D TA+ +N K GGR+++VGTTS R LET +G + SG+
Sbjct: 217 EDIQEHVMHSEYYKMDKKTAEIINDTKENGGRVIAVGTTSCRTLETIGDIEGKVGEQSGW 276
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFI PGY+++ VD L++NFHLP+STLLMLVSA G + Y A+ YRF+S+GD
Sbjct: 277 TDIFIYPGYKYKVVDALITNFHLPQSTLLMLVSALAGRDNIMNAYNVAVEKEYRFFSFGD 336
Query: 353 TSLL 356
+
Sbjct: 337 AMFI 340
>gi|163790793|ref|ZP_02185219.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Carnobacterium sp. AT7]
gi|159873973|gb|EDP68051.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Carnobacterium sp. AT7]
Length = 343
Score = 276 bits (707), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 152/353 (43%), Positives = 213/353 (60%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ K+FDFDLP IA P+ R S++L+++ + D +D+ L+ DA+V
Sbjct: 2 LTTKDFDFDLPEELIAQTPLENRSSSKLLILDKETGK---VEDKHFTDILDELHEGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G++ I L + W +P+K G+++ F
Sbjct: 59 MNDTRVLPARLHGIK----TETGAHIEILLLKNTENDRWETLVKPAKKATVGNVISF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV ++ G ++ FS GI LE SL G +PLPPYI + R Y
Sbjct: 112 -GDGRLTATVKEELTHGGRIIDFSYEGIFLEVLESL-GEMPLPPYIKERLEDSER----Y 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+++ F+TLHVG GTF PV V+ +DH M
Sbjct: 166 QTVYAKENGSAAAPTAGLHFTQELLEQIKAKGVQLVFLTLHVGLGTFRPVSVDSIEDHEM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + +A AL +V+ GG+IV+VGTTS+R LET T+ +G + SG+T+IFI+P
Sbjct: 226 HSEFYRLTEESAAALTAVQKNGGKIVAVGTTSIRTLETIGTKFNGELKADSGWTDIFISP 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY+F+ VD +NFHLPKSTL+MLVSAF G E YQHA+ YRF+S+GD
Sbjct: 286 GYKFKVVDAFSTNFHLPKSTLVMLVSAFAGREHVLAAYQHAVDEKYRFFSFGD 338
>gi|296331683|ref|ZP_06874152.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
subtilis subsp. spizizenii ATCC 6633]
gi|305675358|ref|YP_003867030.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
subtilis subsp. spizizenii str. W23]
gi|296151278|gb|EFG92158.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
subtilis subsp. spizizenii ATCC 6633]
gi|305413602|gb|ADM38721.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
subtilis subsp. spizizenii str. W23]
Length = 342
Score = 276 bits (707), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 213/358 (59%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP IA P+ RD++RLMV+ + ++D + +F D +V
Sbjct: 1 MKVDLFDFELPERLIAQVPLEQRDASRLMVLDKHTG---ELTDSSFKHIISFFKEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + ++ L + + + W A+P+K +KKG ++ F
Sbjct: 58 LNNTRVLPARLFGTK----EDTGAKVELLLLKQEAGDRWETLAKPAKRVKKGTVVTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A ++ G + F GI E SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLKAVCTEELEHGGRRMEFQYDGIFYEVLESL-GEMPLPPYI--KEQLDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT +L +L G+++ F+TLHVG GTF PV +D ++H M
Sbjct: 165 QTVYSKEIGSAAAPTAGLHFTEEILQQLKDKGVQIEFITLHVGLGTFRPVSADDVEEHNM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
H+E + TA ALN V+ GGRI+SVGTTS R LET E DG SG+T+IFI P
Sbjct: 225 HAEFYQMSEETAAALNKVRENGGRIISVGTTSTRTLETIAGEHDGQFKASSGWTSIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY F+A+D +++NFHLPKS+L+MLVSA G E + Y HA+ YRF+S+GD L+
Sbjct: 285 GYEFKAIDGMITNFHLPKSSLIMLVSALAGRENVLRAYNHAVEEEYRFFSFGDAMLIL 342
>gi|148381020|ref|YP_001255561.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum A str. ATCC 3502]
gi|153931608|ref|YP_001385391.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum A str. ATCC 19397]
gi|153935623|ref|YP_001388798.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum A str. Hall]
gi|166216714|sp|A7FY18|QUEA_CLOB1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|166216715|sp|A5I6F0|QUEA_CLOBH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|148290504|emb|CAL84632.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum A str. ATCC 3502]
gi|152927652|gb|ABS33152.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum A str. ATCC 19397]
gi|152931537|gb|ABS37036.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum A str. Hall]
Length = 341
Score = 276 bits (707), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 152/364 (41%), Positives = 209/364 (57%), Gaps = 32/364 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RD ARL+V+ I + D+ +L ND +V
Sbjct: 1 MKVKDFDFYLPEELIAQHPIEKRDEARLLVLDKETG---EIEHKIFKDILDYLTPNDCLV 57
Query: 61 FNNTKVITAQLNGVR--------FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKG 112
NNT+V+ A+L G + F + R+EK++ W +P K + G
Sbjct: 58 LNNTRVLPARLIGAKEETGGKMEFLLLKRKEKDV------------WETLVKPGKRAQIG 105
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
F G L+A VI G ++ F GI E + +G +PLPPYI K +
Sbjct: 106 ARFIF----GNGELKAEVIGMGEEGSRIVKFYYEGI-FEEILDQLGQMPLPPYIKEK--L 158
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D ++ YQT Y+K +GS AAPTAGLHFT LL ++ G+K+ F+TLHVG GTF PVKV
Sbjct: 159 DDKEM--YQTVYSKEEGSAAAPTAGLHFTEELLKKIEEKGVKLAFLTLHVGLGTFRPVKV 216
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
ED +H+MHSE +D TA+ +N K GGR+++VGTTS R LET +G + SG+
Sbjct: 217 EDIQEHVMHSEYYKMDKKTAEIINDTKENGGRVIAVGTTSCRTLETIGAIEGKVGEQSGW 276
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFI PGY+++ VD L++NFHLP+STLLMLVSA G + Y A+ YRF+S+GD
Sbjct: 277 TDIFIYPGYKYKVVDALITNFHLPQSTLLMLVSALAGRDNIMNAYNVAVEKEYRFFSFGD 336
Query: 353 TSLL 356
+
Sbjct: 337 AMFI 340
>gi|170757777|ref|YP_001782704.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum B1 str. Okra]
gi|229598025|sp|B1IMF2|QUEA_CLOBK RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|169122989|gb|ACA46825.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum B1 str. Okra]
Length = 341
Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 152/364 (41%), Positives = 209/364 (57%), Gaps = 32/364 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RD ARL+V+ I + D+ +L ND +V
Sbjct: 1 MKVKDFDFYLPEELIAQHPMEKRDEARLLVLDKETG---EIEHKIFKDILDYLTPNDCLV 57
Query: 61 FNNTKVITAQLNG--------VRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKG 112
NNT+V+ A+L G + F + R+EK++ W +P K + G
Sbjct: 58 LNNTRVLPARLIGSKEETGGKMEFLLLKRKEKDV------------WETLVKPGKRAQIG 105
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
F G L+A VI G ++ F GI E + +G +PLPPYI K +
Sbjct: 106 ARFIF----GNGELKAEVIGMGEEGSRIVKFYYEGI-FEEILDQLGQMPLPPYIKEK--L 158
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D ++ YQT Y+K +GS AAPTAGLHFT LL ++ G+K+ F+TLHVG GTF PVKV
Sbjct: 159 DDKEM--YQTVYSKEEGSAAAPTAGLHFTEELLKKIEEKGVKLAFLTLHVGLGTFRPVKV 216
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
ED +H+MHSE +D TA+ +N K GGR+++VGTTS R LET +G + SG+
Sbjct: 217 EDIQEHVMHSEYYKMDKKTAEIINDTKENGGRVIAVGTTSCRTLETIADIEGKVGEQSGW 276
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFI PGY+++ VD L++NFHLP+STLLMLVSA G + Y A+ YRF+S+GD
Sbjct: 277 TDIFIYPGYKYKVVDALITNFHLPQSTLLMLVSALAGKDNIMNAYNVAVEKEYRFFSFGD 336
Query: 353 TSLL 356
+
Sbjct: 337 AMFI 340
>gi|298369998|ref|ZP_06981314.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
sp. oral taxon 014 str. F0314]
gi|298281458|gb|EFI22947.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
sp. oral taxon 014 str. F0314]
Length = 343
Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 155/356 (43%), Positives = 215/356 (60%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP + IA P R +RL+ P++ + D SDLP ++ + D +V
Sbjct: 1 MDISDFDFDLPQALIAQHPPKVRGGSRLLAALPDMP----LQDAAFSDLPDYIGAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + +I + + ++ + R SK K G +L F
Sbjct: 57 FNNTKVMKARLFGQK-----ESGGKIEALIERVLDGHTALAHIRSSKSPKAGTVLIF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A +I++ G++ + G + + G +PLPPYI +R D D Y
Sbjct: 109 --EGGIRAVMIER--AGDLFCLRFDCGQTVYELLEQNGRLPLPPYI--ERAADDDDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL + G++ VTLHVGAGTF PV+V + DH M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTDELLGRLKAKGVETAEVTLHVGAGTFQPVRVSNIADHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + T A+ + ++RGGR+ +VGTTS+R LE+A E G + G T+IFITPG
Sbjct: 223 HSEWFDVPPETVAAIEAAQARGGRVWAVGTTSMRALESAARETGRLKAGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF D L++NFHLPKSTLLMLV+AF G+E + +Y+HA+ H YRF+SYGD LL
Sbjct: 283 YRFNVADRLITNFHLPKSTLLMLVAAFSGMEHIRAVYRHAVEHEYRFFSYGDAMLL 338
>gi|150390105|ref|YP_001320154.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Alkaliphilus metalliredigens QYMF]
gi|167016401|sp|A6TQM7|QUEA_ALKMQ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|149949967|gb|ABR48495.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Alkaliphilus metalliredigens QYMF]
Length = 341
Score = 276 bits (706), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 154/356 (43%), Positives = 210/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M EFDFDLP IA P+ RD +RLMV+ N ++ H D+ +LN D +V
Sbjct: 1 MKTNEFDFDLPDRLIAQTPLEKRDHSRLMVLDKNKQE--IVHKHFY-DITDYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L GV+ ++ L R+ N+W V +P K K G F
Sbjct: 58 INNTRVLPARLFGVK----ENTGGKMEFLLLKRIDLNTWEVLVKPGKKAKIGSRFEF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L+A V+ + G ++ F G+ E + +G +PLPPYI + D Y
Sbjct: 111 -GEGILKAEVLSMADEGARIVRFEYEGV-FEELLDQLGKMPLPPYITE----ELADRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LLS + GI V +TLHVG GTF PVKV+ ++H M
Sbjct: 165 QTVYSKHEGSSAAPTAGLHFTPELLSEIKKKGINVVSITLHVGLGTFRPVKVDSLENHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E I AQ +N K G R+ +VGTTS R LE+A+TE G I G+TNIFI PG
Sbjct: 225 HAEYYEITEEAAQVINDTKKAGNRVFAVGTTSCRTLESASTEKGKIEANKGWTNIFIFPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA G E+T + Y+ A+ YRF+S+GD L+
Sbjct: 285 YQFKILDGLITNFHLPESTLIMLVSALLGKEKTLQAYKVAVDEQYRFFSFGDAMLI 340
>gi|313895559|ref|ZP_07829115.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Selenomonas
sp. oral taxon 137 str. F0430]
gi|312975685|gb|EFR41144.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Selenomonas
sp. oral taxon 137 str. F0430]
Length = 346
Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 154/360 (42%), Positives = 214/360 (59%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+DLP RIA P+ PRD++RLMV+ P I +L L D ++
Sbjct: 1 MDISDFDYDLPEKRIAQTPLEPRDASRLMVLDP---AEQTIEHRHFYELDVLLQPGDVLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G R ++ ++ L ++ + W +P K + GD + F +
Sbjct: 58 FNDTRVIPARLIGAR----DKTGAKVEVLLLRQIDRDRWEALVKPGKKARIGDRIRFGEE 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L +I + G ++ F GI E + +G +PLPPYI RK+ DA Y
Sbjct: 114 -----LSCGIISHTDFGGRIVKFIYQGI-FEEILDRLGEMPLPPYI-RKKLSDADRY--- 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ +GS AAPTAGLHFT LL RL G+ FVTLHVG GTF PV+ + ++H+M
Sbjct: 164 QTIYSRERGSAAAPTAGLHFTEELLVRLKEKGVIFGFVTLHVGLGTFRPVQEQTIENHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I TAQ + K+ G RIV+VGTTS+R LE+A E G I P SG+T+IFI PG
Sbjct: 224 HREYYAIPEETAQIIRRAKAEGRRIVAVGTTSIRTLESAAGETGEIRPTSGWTDIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRF+ VD +++NFHLPKSTL+ML+SAF G Y+ A+ YRF+S+GD ++L Q R
Sbjct: 284 YRFKVVDAIITNFHLPKSTLIMLISAFAGRSFILNAYKQAVDEGYRFFSFGD-AMLIQGR 342
>gi|312623361|ref|YP_004024974.1| s-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor kronotskyensis 2002]
gi|312203828|gb|ADQ47155.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor kronotskyensis 2002]
Length = 346
Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 213/358 (59%), Gaps = 22/358 (6%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+F +DLP IA +PV PRDS+RLMV+ P+ I + D+ +LN D +V NN+
Sbjct: 8 DFHYDLPDELIAQKPVEPRDSSRLMVILPDGR----IEHRIFRDIVDYLNEGDCLVLNNS 63
Query: 65 KVITAQLNGVRFCHINRREKE---ISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
KVI A+L I +RE I L R+ N+W V RP K +KG F +
Sbjct: 64 KVIPARL-------IGQREDTGSFIEFLLVKRLDINTWEVMTRPGKKARKGR--RFVFGN 114
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G+ + E +++ G ++ F G+ E + +G IPLPPYI K +D D YQ
Sbjct: 115 GELKAEVLHVNR-EEGTRIVRFYYDGV-FEEVLERLGKIPLPPYI--KEELD--DLSRYQ 168
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T Y+K+ GS AAPTAGLHFT LLSR+ G+++ +VTLHVG GTF PVKVE+ ++H MH
Sbjct: 169 TVYSKVPGSAAAPTAGLHFTEELLSRISKKGVEILYVTLHVGLGTFKPVKVENVEEHKMH 228
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E I A +N K G RI++VGTTS R+LE+ E+G + G+T+IFI PGY
Sbjct: 229 EEYYEISQDVADKINKAKELGKRIIAVGTTSCRVLESCCDENGKVKAKKGWTDIFIYPGY 288
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
F+ +D L++NFHLP +TL+MLV AF G E Y+ A+ YRF+S+GD L+ ++
Sbjct: 289 EFKVLDGLVTNFHLPDTTLMMLVCAFGGYERIMNAYKIAVDMRYRFFSFGDAMLILRR 346
>gi|323702061|ref|ZP_08113729.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfotomaculum nigrificans DSM 574]
gi|323532943|gb|EGB22814.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfotomaculum nigrificans DSM 574]
Length = 341
Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 150/356 (42%), Positives = 210/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + ++D+ LP IA P+ RD +RLMVVH + D+ +L D +V
Sbjct: 1 MRLSDYDYQLPEELIAQEPLVNRDQSRLMVVHKDNQN---FEHKHFKDIINYLQPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A++ G R +I L +++ N W +P K + GDIL F
Sbjct: 58 LNDTKVIPARIFGTRIA----TGAKIEVLLLRQLTANRWETLVKPGKKARVGDILDF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
GQ +++ ++D + G ++ FS + + +GT+PLPPYI K+P+ D Y
Sbjct: 111 -GQGQMQGKILDHTDVGGRIIEFSFRE-PFVQVLERIGTMPLPPYI--KKPLA--DQQRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +GS AAPTAGLHFT LL+ + S G+ V LHVG GTF PV+VED H M
Sbjct: 165 QTVYARQEGSAAAPTAGLHFTPELLAEIRSRGVITVNVLLHVGLGTFRPVQVEDITQHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A+ +N+ + RGGRI++VGTTS+R LET+ + G + SG T+IFI PG
Sbjct: 225 HEEYYEVTPEAAEKINTARERGGRIIAVGTTSVRCLETSANQAGQVLAGSGLTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF+ V+ L++NFHLPKSTLLMLVSA G E+ YQ A+ YRF+S+GD L+
Sbjct: 285 YRFKVVEGLITNFHLPKSTLLMLVSALAGREKILAAYQEAVRQRYRFFSFGDAMLI 340
>gi|304436494|ref|ZP_07396468.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Selenomonas
sp. oral taxon 149 str. 67H29BP]
gi|304370540|gb|EFM24191.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Selenomonas
sp. oral taxon 149 str. 67H29BP]
Length = 343
Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 153/360 (42%), Positives = 217/360 (60%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+ LP +IA P PRDS+R+MV+ P I L +L D ++
Sbjct: 1 MNISDFDYFLPEEQIAQVPADPRDSSRMMVLSPKTQS---IEHRHFYQLDEYLTDGDVLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L GVR + E L ++ + W V +P K ++ G ++ F +
Sbjct: 58 FNDTRVIPARLIGVRQPTGGKAE----VFLLRQLERDRWEVLVKPGKKMRVGSVITFGHE 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L V+ + G ++ FS GI E + +GT+PLPPYI +D Y
Sbjct: 114 -----LSCEVLAYTDFGGRIVKFSYEGI-FEEILERLGTMPLPPYIHET----LQDPERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ +GS AAPTAGLHFT L+ RL G+++ FVTLHVG GTF PV+V++ +DH+M
Sbjct: 164 QTIYSREKGSAAAPTAGLHFTEALMDRLRKKGVRLGFVTLHVGLGTFRPVQVDEIEDHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I TA + K G R+++VGTTS+R LE+A + G+I G+TNIFI PG
Sbjct: 224 HSEFYSIPTETADLIRMAKQEGRRVIAVGTTSIRTLESAAVDHGMIEAKQGWTNIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
Y+F+ VD +++NFHLPKSTL+MLVSAF G E T K Y+ A+ YRF+S+GD ++L Q R
Sbjct: 284 YQFKIVDAVITNFHLPKSTLIMLVSAFAGREFTLKAYRTAVEENYRFFSFGD-AMLIQSR 342
>gi|288904875|ref|YP_003430097.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus gallolyticus UCN34]
gi|306830927|ref|ZP_07464089.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus gallolyticus subsp. gallolyticus TX20005]
gi|325977816|ref|YP_004287532.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus gallolyticus subsp. gallolyticus ATCC
BAA-2069]
gi|288731601|emb|CBI13156.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus gallolyticus UCN34]
gi|304426950|gb|EFM30060.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus gallolyticus subsp. gallolyticus TX20005]
gi|325177744|emb|CBZ47788.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus gallolyticus subsp. gallolyticus ATCC
BAA-2069]
Length = 342
Score = 276 bits (705), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 159/354 (44%), Positives = 217/354 (61%), Gaps = 19/354 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
M +FDF+LP IA P+ RDS++L+V+ H DH++ +L N DA+
Sbjct: 1 MNTNDFDFNLPEELIAQTPLEKRDSSKLLVIDHKTHEMVDAHFDHILDEL----NPGDAL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V NNT+V+ A+L G + + L + W V A+P+K ++ G + F
Sbjct: 57 VMNNTRVLPARLYGEK----PDTHGHVELLLLKNTQGDQWEVLAKPAKRLRVGAKVSF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G RL ATV+++ + G ++ F+ GI LE SL G +PLPPYI K +D D
Sbjct: 111 --GDGRLTATVVEELDHGGRIVEFAYDGIFLEVLESL-GEMPLPPYIHEK--LDDPDR-- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT +LL+++ + G+K+ ++TLHVG GTF PV V++ ++H
Sbjct: 164 YQTVYAKENGSAAAPTAGLHFTQDLLAKIEAKGVKLVYLTLHVGLGTFRPVSVDNIEEHE 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MHSE + AQ L VK+ G R+V+VGTTS+R LET ++ +G I SG+TNIFI
Sbjct: 224 MHSEFYTLSEEAAQTLRDVKAAGRRVVAVGTTSIRTLETIGSKFNGDIKADSGWTNIFIK 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY F+ VD +NFHLPKSTL+MLVSAF G E YQHAI YRF+S+GD
Sbjct: 284 PGYEFKVVDAFSTNFHLPKSTLVMLVSAFAGREFVLDAYQHAIDERYRFFSFGD 337
>gi|251782850|ref|YP_002997153.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus dysgalactiae subsp. equisimilis GGS_124]
gi|242391480|dbj|BAH81939.1| S-adenosylmethionine/tRNA ribosyltransferase-isomerase
[Streptococcus dysgalactiae subsp. equisimilis GGS_124]
Length = 342
Score = 276 bits (705), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 157/356 (44%), Positives = 215/356 (60%), Gaps = 23/356 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVIS---DHLVSDLPAFLNSND 57
M +FDFDLP IA P+ RDS++L+++ + ++I DH++ L N D
Sbjct: 1 MNTNDFDFDLPEELIAQTPLEKRDSSKLLII--DHEQKIMIDSHFDHIIDQL----NPGD 54
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
A+V NNT+V+ A+L G + + L + W V A+P+K +K G + F
Sbjct: 55 ALVMNNTRVLPARLYGEK----PDTHGHVELLLLKNTHGDQWEVLAKPAKRLKVGSQVSF 110
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
G RL AT++++ G ++ F+ GI LE SL G +PLPPYI K R
Sbjct: 111 ----GDGRLTATIVEELEHGGRIVEFNYEGIFLEVLESL-GEMPLPPYIHEKLDDAER-- 163
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YAK GS AAPTAGLHFT++LLS++ + G+ + ++TLHVG GTF PV V++ DD
Sbjct: 164 --YQTVYAKENGSAAAPTAGLHFTTDLLSKIDAKGVHLVYLTLHVGLGTFRPVSVDNLDD 221
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIF 296
H MHSE + AQ L VK GG +V+VGTTS+R LET ++ G I SG+TNIF
Sbjct: 222 HDMHSEFYSLSEEAAQTLRDVKKAGGHVVAVGTTSIRTLETIGSKFQGDIQADSGWTNIF 281
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
I PGY+F+ VD +NFHLPKSTL+MLVSAF G + Y+HA+ YRF+S+GD
Sbjct: 282 IKPGYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLDAYKHAVDEKYRFFSFGD 337
>gi|16079825|ref|NP_390650.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
subtilis subsp. subtilis str. 168]
gi|221310710|ref|ZP_03592557.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
subtilis subsp. subtilis str. 168]
gi|221315034|ref|ZP_03596839.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
subtilis subsp. subtilis str. NCIB 3610]
gi|221319955|ref|ZP_03601249.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
subtilis subsp. subtilis str. JH642]
gi|221324236|ref|ZP_03605530.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
subtilis subsp. subtilis str. SMY]
gi|321312300|ref|YP_004204587.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
subtilis BSn5]
gi|3914532|sp|O32054|QUEA_BACSU RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|2635237|emb|CAB14732.1| S-adenosylmethionine tRNA ribosyltransferase-isomerase [Bacillus
subtilis subsp. subtilis str. 168]
gi|6977807|emb|CAB75332.1| QueA protein [Bacillus subtilis subsp. subtilis str. 168]
gi|291485182|dbj|BAI86257.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
subtilis subsp. natto BEST195]
gi|320018574|gb|ADV93560.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
subtilis BSn5]
Length = 342
Score = 276 bits (705), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 152/357 (42%), Positives = 214/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP IA P+ RD++RLMV+ + ++D + +F N D +V
Sbjct: 1 MKVDLFDFELPERLIAQVPLEQRDASRLMVLDKHTG---ELTDSSFKHIISFFNEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + ++ L + + + W A+P+K +KKG ++ F
Sbjct: 58 LNNTRVLPARLFGTK----EDTGAKVELLLLKQETGDKWETLAKPAKRVKKGTVVTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A ++ G + F GI E SL G +PLPPYI K +D ++ Y
Sbjct: 111 -GDGRLKAICTEELEHGGRKMEFQYDGIFYEVLESL-GEMPLPPYI--KEQLDDKER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT +L +L G+++ F+TLHVG GTF PV ++ ++H M
Sbjct: 165 QTVYSKEIGSAAAPTAGLHFTEEILQQLKDKGVQIEFITLHVGLGTFRPVSADEVEEHNM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
H+E + TA ALN V+ GGRI+SVGTTS R LET E DG SG+T+IFI P
Sbjct: 225 HAEFYQMSEETAAALNKVRENGGRIISVGTTSTRTLETIAGEHDGQFKASSGWTSIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D +++NFHLPKS+L+MLVSA G E + Y HA+ YRF+S+GD L+
Sbjct: 285 GYEFKAIDGMITNFHLPKSSLIMLVSALAGRENILRAYNHAVEEEYRFFSFGDAMLI 341
>gi|320528956|ref|ZP_08030048.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Selenomonas
artemidis F0399]
gi|320138586|gb|EFW30476.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Selenomonas
artemidis F0399]
Length = 346
Score = 275 bits (704), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 152/360 (42%), Positives = 211/360 (58%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+DLP RIA P+ PRD++RLMV+ P I +L L D ++
Sbjct: 1 MDISDFDYDLPEERIAQTPLEPRDASRLMVLDP---AEQTIEHRHFYELDVLLQPGDVLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G R ++ ++ L ++ + W +P K + GD + F +
Sbjct: 58 FNDTRVIPARLIGAR----DKTGAKVEVLLLRQIDRDRWEALVKPGKKARIGDRIRFGEE 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L +I + G ++ F GI E + +G +PLPPYI K D Y
Sbjct: 114 -----LSCGIISHTDFGGRIVKFIYQGI-FEEILDRLGEMPLPPYIREK----LSDADRY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ +GS AAPTAGLHFT LL RL G+ FVTLHVG GTF PV+ + ++H+M
Sbjct: 164 QTIYSRERGSAAAPTAGLHFTEELLVRLKEKGVIFGFVTLHVGLGTFRPVQEQTIENHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I TAQ + K+ G RIV+VGTTS+R LE+A E G I P SG+T+IFI PG
Sbjct: 224 HREYYAIPEETAQIIRRAKAEGRRIVAVGTTSIRTLESAAGETGEIRPTSGWTDIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRF+ VD +++NFHLPKSTL+ML+SAF G Y+ A+ YRF+S+GD ++L Q R
Sbjct: 284 YRFKVVDAIITNFHLPKSTLIMLISAFAGRSFILNAYKQAVDEGYRFFSFGD-AMLIQGR 342
>gi|222528286|ref|YP_002572168.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor bescii DSM 6725]
gi|222455133|gb|ACM59395.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor bescii DSM 6725]
Length = 346
Score = 275 bits (704), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 151/358 (42%), Positives = 214/358 (59%), Gaps = 22/358 (6%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+F +DLP IA +PV PRDS+RLMV+ P+ I + D+ +LN D +V NN+
Sbjct: 8 DFHYDLPDELIAQKPVEPRDSSRLMVILPDGR----IEHRIFRDIVEYLNEGDCLVLNNS 63
Query: 65 KVITAQLNGVRFCHINRREKE---ISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
KVI A+L I +RE+ I L R+ N+W V RP K +KG F +
Sbjct: 64 KVIPARL-------IGQREETGSFIEFLLIKRLDINTWEVMTRPGKKARKGR--RFVFGN 114
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G+ + E +++ G ++ F G+ E + +G IPLPPYI K +D D YQ
Sbjct: 115 GELKAEVLHVNR-EEGTRVVRFYYDGV-FEEVLERLGKIPLPPYI--KEELD--DLSRYQ 168
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T Y+K+ GS AAPTAGLHFT LLSR+ G+++ +VTLHVG GTF PVKVE+ ++H MH
Sbjct: 169 TVYSKVPGSAAAPTAGLHFTEELLSRISKKGVEILYVTLHVGLGTFKPVKVENVEEHKMH 228
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E I + +N K G R+++VGTTS R+LE+ E+G + G+T+IFI PGY
Sbjct: 229 EEYYEISEDVTERINRAKELGKRVIAVGTTSCRVLESCCDENGKVKAKKGWTDIFIYPGY 288
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
F+ +D L++NFHLP +TL+MLV AF G E Y+ A+ YRF+S+GD L+ ++
Sbjct: 289 EFKVLDGLVTNFHLPDTTLMMLVCAFGGYERIMNAYKIAVDMRYRFFSFGDAMLILRR 346
>gi|307692339|ref|ZP_07634576.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Ruminococcaceae bacterium D16]
Length = 341
Score = 275 bits (704), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 207/358 (57%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD++RL+ + + + H +LP FL D +V
Sbjct: 1 MKTSDFDFYLPEELIAQTPLERRDASRLLTLDKHTG---AVEHHHFYELPQFLRPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN--SWSVYARPSKVIKKGDILHFF 118
NN++VI A+L I R C + + V W RP + +K G + F
Sbjct: 58 LNNSRVIPARL-------IGHRPTGGVCEVLLLVDKGDKCWECLVRPGRKLKPGAQVIF- 109
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
DG + L AT+ + + G+ L+ F GI LE + +G +PLPPYI + +D
Sbjct: 110 -GDG-TELTATIEKELDDGKRLVRFHYEGIFLE-ILERLGKMPLPPYIK----AELQDNE 162
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y+K+ GS AAPTAGLHFT LL ++ +G+KV +VTLHVG GTF PVK ED DH
Sbjct: 163 RYQTVYSKVVGSAAAPTAGLHFTPELLEKVQEMGVKVCYVTLHVGLGTFRPVKAEDIQDH 222
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE I TA +N K GGR++ VGTTS R +E+ EDG + SG+TNIFI
Sbjct: 223 EMHSEYCMISQETADVINETKKNGGRVICVGTTSCRTIESFAAEDGTMTERSGWTNIFIY 282
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGYRF+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 283 PGYRFKVLDALITNFHLPESTLIMLVSALAGREHVLAAYEEAVRERYRFFSFGDAMFI 340
>gi|168179563|ref|ZP_02614227.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum NCTC 2916]
gi|168181759|ref|ZP_02616423.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum Bf]
gi|226950498|ref|YP_002805589.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum A2 str. Kyoto]
gi|237796525|ref|YP_002864077.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum Ba4 str. 657]
gi|254764272|sp|C1FKG0|QUEA_CLOBJ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|259551441|sp|C3KTD1|QUEA_CLOB6 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|182669806|gb|EDT81782.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum NCTC 2916]
gi|182675035|gb|EDT86996.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum Bf]
gi|226842049|gb|ACO84715.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum A2 str. Kyoto]
gi|229263462|gb|ACQ54495.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum Ba4 str. 657]
Length = 341
Score = 275 bits (704), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 151/364 (41%), Positives = 210/364 (57%), Gaps = 32/364 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RD ARL+V+ I + D+ +L ND +V
Sbjct: 1 MKVKDFDFYLPEELIAQHPMEKRDEARLLVLDKKTGG---IEHKIFKDILDYLTPNDCLV 57
Query: 61 FNNTKVITAQLNGVR--------FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKG 112
NNT+V+ A+L G + F + R+EK++ W +P K + G
Sbjct: 58 LNNTRVLPARLIGAKEETGGKMEFLLLKRKEKDV------------WETLVKPGKRAQIG 105
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
F G L+A VI G ++ F GI E + +G +PLPPYI K +
Sbjct: 106 ARFIF----GNGELKAEVIGMGEEGSRIVKFYYEGI-FEEILDQLGQMPLPPYIKEK--L 158
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D ++ YQT Y+K +GS AAPTAGLHFT LL ++ G+K+ F+TLHVG GTF PVKV
Sbjct: 159 DDKEM--YQTVYSKEEGSAAAPTAGLHFTEELLKKIKEKGVKLAFLTLHVGLGTFRPVKV 216
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
E+ +H+MHSE +D TA+ +N K +GGR+++VGTTS R LET +G + SG+
Sbjct: 217 ENIQEHVMHSEYYKMDKETAEIINDTKEKGGRVIAVGTTSCRTLETIGDIEGKVREQSGW 276
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFI PGY+++ VD L++NFHLP+STLLMLVSA G + Y A+ YRF+S+GD
Sbjct: 277 TDIFIYPGYKYKVVDALITNFHLPQSTLLMLVSALAGRDNIMNAYNVAVEKEYRFFSFGD 336
Query: 353 TSLL 356
+
Sbjct: 337 AMFI 340
>gi|312792494|ref|YP_004025417.1| s-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor kristjanssonii 177R1B]
gi|312179634|gb|ADQ39804.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor kristjanssonii 177R1B]
Length = 346
Score = 275 bits (704), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 153/359 (42%), Positives = 212/359 (59%), Gaps = 24/359 (6%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+F +DLP IA +PV PRDS+RLMV+ P+ + I + D+ +LN D +V NN+
Sbjct: 8 DFHYDLPEELIAQKPVEPRDSSRLMVILPDGT----IEHRIFRDIVEYLNEGDCLVLNNS 63
Query: 65 KVITAQLNGVRFCHINRREKE---ISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
KVI A+L I +RE I L R+ N+W V RP K +KG F
Sbjct: 64 KVIPARL-------IGQREDTGSFIEFLLVKRLDINTWEVMTRPGKKARKGRKFVF---- 112
Query: 122 GQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A V+ + G ++ F G+ E + +G IPLPPYI K +D D Y
Sbjct: 113 GNGELKAEVLHVNQDEGTRIVRFYYEGV-FEEVLERLGKIPLPPYI--KEELD--DLSRY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K+ GS AAPTAGLHFT LL R+ G+++ +VTLHVG GTF PVKVE+ ++H M
Sbjct: 168 QTVYSKVPGSAAAPTAGLHFTEELLDRISKKGVEILYVTLHVGLGTFKPVKVENVEEHKM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I A +N K G R+++VGTTS R+LE+ + E G + G+T+IFI PG
Sbjct: 228 HEEYYEISQDVADKINRAKEVGKRVIAVGTTSCRVLESCSDETGRVKAKKGWTDIFIYPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
Y F+ +D L++NFHLP +TL+MLV AF G E Y+ A+ YRF+S+GD L+ ++
Sbjct: 288 YNFKVLDGLVTNFHLPDTTLMMLVCAFGGYERIMNAYKIAVDMRYRFFSFGDAMLILRR 346
>gi|322807370|emb|CBZ04944.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum H04402 065]
Length = 341
Score = 275 bits (703), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 152/364 (41%), Positives = 209/364 (57%), Gaps = 32/364 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RD ARL+V+ I + D+ +L ND +V
Sbjct: 1 MKVKDFDFYLPEELIAQHPMEKRDEARLLVLDKETG---EIEHKIFKDILDYLTPNDCLV 57
Query: 61 FNNTKVITAQLNG--------VRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKG 112
NNT+V+ A+L G + F + R+EK++ W +P K + G
Sbjct: 58 LNNTRVLPARLIGSKEETGGKMEFLLLKRKEKDV------------WETLVKPGKRAQIG 105
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
F G L+A VI G ++ F GI E + +G +PLPPYI K +
Sbjct: 106 ARFIF----GNGELKAEVIGMGEEGSRIVKFYYEGI-FEEILDQLGQMPLPPYIKEK--L 158
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D ++ YQT Y+K +GS AAPTAGLHFT LL ++ G+K+ F+TLHVG GTF PVKV
Sbjct: 159 DDKEM--YQTVYSKEEGSAAAPTAGLHFTEELLKKIEEKGVKLAFLTLHVGLGTFRPVKV 216
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
ED +H+MHSE +D TA+ +N K GGR+++VGTTS R LET +G + SG+
Sbjct: 217 EDIQEHVMHSEYYKMDKKTAEIINDTKENGGRVIAVGTTSCRTLETIGDIEGKVGEQSGW 276
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFI PGY+++ VD L++NFHLP+STLLMLVSA G + Y A+ YRF+S+GD
Sbjct: 277 TDIFIYPGYKYKVVDALITNFHLPQSTLLMLVSALAGRDNIMNAYNVAVEKEYRFFSFGD 336
Query: 353 TSLL 356
+
Sbjct: 337 AMFI 340
>gi|22536961|ref|NP_687812.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae 2603V/R]
gi|76787449|ref|YP_329544.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae A909]
gi|76798552|ref|ZP_00780784.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae 18RS21]
gi|77406569|ref|ZP_00783618.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae H36B]
gi|77411332|ref|ZP_00787680.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae CJB111]
gi|46577057|sp|Q8E0D7|QUEA_STRA5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|91207329|sp|Q3K1Q9|QUEA_STRA1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|22533815|gb|AAM99684.1|AE014228_5 S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae 2603V/R]
gi|76562506|gb|ABA45090.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae A909]
gi|76586086|gb|EAO62612.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae 18RS21]
gi|77162592|gb|EAO73555.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae CJB111]
gi|77174822|gb|EAO77642.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae H36B]
Length = 342
Score = 275 bits (703), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 158/354 (44%), Positives = 215/354 (60%), Gaps = 19/354 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
M +FDF LP IA P+ RD+++L+V+ H N + DH++ +L DA+
Sbjct: 1 MNTNDFDFYLPEELIAQTPLEKRDASKLLVIDHKNKTMTDSHFDHILDEL----KPGDAL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V NNT+V+ A+L G + + L + W V A+P+K ++ G + F
Sbjct: 57 VMNNTRVLPARLYGEK----QDTHGHVELLLLKNTEGDQWEVLAKPAKRLRVGTKVSF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G RL ATV + G ++ FS GI LE SL G +PLPPYI K ++ RD
Sbjct: 111 --GDGRLIATVTKELEHGGRIVEFSYDGIFLEVLESL-GEMPLPPYIHEK--LEDRDR-- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ D+H
Sbjct: 164 YQTVYAKENGSAAAPTAGLHFTKELLEKIETKGVKLVYLTLHVGLGTFRPVSVDNLDEHE 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MHSE + A LN+VK GGRIV+VGTTS+R LET ++ +G + SG+TNIFI
Sbjct: 224 MHSEFYQLSKEAADTLNAVKESGGRIVAVGTTSIRTLETIGSKFNGELKADSGWTNIFIK 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY+F+ VD +NFHLPKSTL+MLVSAF G + + Y HA+ YRF+S+GD
Sbjct: 284 PGYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYNHAVEERYRFFSFGD 337
>gi|331269240|ref|YP_004395732.1| S-adenosylmethionine--tRNA-ribosyltransferase- isomerase
[Clostridium botulinum BKT015925]
gi|329125790|gb|AEB75735.1| S-adenosylmethionine--tRNA-ribosyltransferase- isomerase
[Clostridium botulinum BKT015925]
Length = 341
Score = 275 bits (702), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 152/356 (42%), Positives = 200/356 (56%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RD +RLMVV + D+ + N D +V
Sbjct: 1 MKVKDFDFYLPEELIAQHPMEKRDESRLMVVDRKSGHR---EHKIFKDILGYFNEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + +I L R+ + W +P K K G F
Sbjct: 58 LNNTRVLPARLIGEK----ENTGGKIEFLLLKRIEGDKWETLVKPGKKAKIGARFVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A V G ++ F GI E + +G +PLPPYI K R Y
Sbjct: 111 -GSGELKAEVKGMGQDGSRIIEFEYEGI-FEEVLDRLGQMPLPPYITEKLDDKER----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL + + G+K+ FVTLHVG GTF PVK ED ++H M
Sbjct: 165 QTVYSKEKGSAAAPTAGLHFTKELLKEIENKGVKIAFVTLHVGLGTFRPVKAEDIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA +N K GG+I++VGTTS R LET E+G + SG+T+IF+ PG
Sbjct: 225 HSEYYTMSKETADIINETKENGGKIIAVGTTSCRTLETIGDENGKVRETSGWTDIFMYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STLLMLVSAF E Y+ A+ YRF+S+GD L
Sbjct: 285 YKFKIVDRLITNFHLPQSTLLMLVSAFSSRENIMNAYKEAVDEKYRFFSFGDAMFL 340
>gi|300856544|ref|YP_003781528.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
ljungdahlii DSM 13528]
gi|300436659|gb|ADK16426.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
ljungdahlii DSM 13528]
Length = 344
Score = 275 bits (702), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 149/356 (41%), Positives = 205/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ V +FDF LP IA P+ RD ARLMV+ I + D+ +LN D +V
Sbjct: 4 LKVTDFDFYLPEELIAQHPLMQRDEARLMVLDKKTG---DIEHKVFKDILDYLNPGDCLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + E L R + ++W +P K K G F
Sbjct: 61 LNDTRVLPARLIGSKEGSGGKME----ILLLKRNADDTWETLVKPGKRAKVGSRFDF--- 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A ++ G ++ F GI E + +G +PLPPYI K D Y
Sbjct: 114 -GDGELKAEIVSVKEDGNRIVKFEYEGI-FEEVLDRLGQMPLPPYIKEK----LEDKEMY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL ++ GIK+ F+TLHVG GTF PVKVE+ ++H M
Sbjct: 168 QTVYSKEEGSAAAPTAGLHFTKELLKKIEDKGIKLAFLTLHVGLGTFRPVKVENIEEHNM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA +N + +GG I++VGTTS R LET E+G + SG+T+IFI PG
Sbjct: 228 HSEYYCMTKETADMINETREKGGSIIAVGTTSCRTLETIGDENGKVREQSGWTDIFIYPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+++ VD L++NFHLP+STL+MLVSA CG E+ Y A+ YRF+S+GD L
Sbjct: 288 YKYKVVDKLITNFHLPQSTLIMLVSALCGREKILNAYNCAVKEKYRFFSFGDAMFL 343
>gi|154686913|ref|YP_001422074.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
amyloliquefaciens FZB42]
gi|166216699|sp|A7Z767|QUEA_BACA2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|154352764|gb|ABS74843.1| QueA [Bacillus amyloliquefaciens FZB42]
Length = 342
Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 152/357 (42%), Positives = 212/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP IA P+ RD++RLMV+ ++D ++ +F N D +V
Sbjct: 1 MKVDLFDFELPERLIAQVPLKERDASRLMVLDKQTGG---LTDSSFKEIVSFFNEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + ++ L + ++W +P+K +KKG +L F
Sbjct: 58 LNNTRVLPARLFGTK----EDTGAKVELLLLKQEENDTWETLVKPAKRVKKGTVLTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A ++ + G + F GI E SL G +PLPPYI K +D ++ Y
Sbjct: 111 -GDGRLTAVCTEELDHGGRKIEFRYDGIFYEVLESL-GEMPLPPYI--KEQLDDKER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT ++K GS AAPTAGLHFT +L L G+++ F+TLHVG GTF PV +D ++H M
Sbjct: 165 QTVFSKEIGSAAAPTAGLHFTEEILDELKQKGVRIEFITLHVGLGTFRPVSADDVEEHNM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
H+E + TA +LN V+ GGRIVSVGTTS R LET E DG SG+T+IFI P
Sbjct: 225 HAEFYEMTEETAASLNEVRKAGGRIVSVGTTSTRTLETIAGEHDGEFTASSGWTSIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D +++NFHLPKS+L+MLVSA G E Y+HA+ YRF+S+GD L+
Sbjct: 285 GYEFKAIDGMITNFHLPKSSLIMLVSALAGREHVLSAYRHAVEEEYRFFSFGDAMLI 341
>gi|77408883|ref|ZP_00785609.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae COH1]
gi|77172522|gb|EAO75665.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae COH1]
Length = 342
Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 158/354 (44%), Positives = 216/354 (61%), Gaps = 19/354 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
M +FDF LP IA P+ RD+++L+V+ H N + DH++ +L DA+
Sbjct: 1 MNTNDFDFYLPEELIAQTPLEKRDASKLLVIDHKNKTMTDSHFDHILDEL----KPGDAL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V NNT+V+ A+L G + + L + W V A+P+K ++ G+ + F
Sbjct: 57 VMNNTRVLPARLYGEK----PDTHGHVELLLLKNTEGDQWEVLAKPAKRLRVGNRVSF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G RL ATV + G ++ FS GI LE SL G +PLPPYI K ++ RD
Sbjct: 111 --GDGRLIATVTKELEHGGRIVEFSYDGIFLEVLESL-GEMPLPPYIHEK--LEDRDR-- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ D+H
Sbjct: 164 YQTVYAKENGSAAAPTAGLHFTKELLEKIETKGVKLVYLTLHVGLGTFRPVSVDNLDEHE 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MHSE + A LN+VK GGRIV+VGTTS+R LET ++ +G + SG+TNIFI
Sbjct: 224 MHSEFYQLSKEAADTLNAVKESGGRIVAVGTTSIRTLETIGSKFNGELKADSGWTNIFIK 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY+F+ VD +NFHLPKSTL+MLVSAF G + + Y HA+ YRF+S+GD
Sbjct: 284 PGYQFKVVDAFSTNFHLPKSTLVMLVSAFAGHDFVLEAYNHAVEERYRFFSFGD 337
>gi|225870087|ref|YP_002746034.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus equi subsp. equi 4047]
gi|225699491|emb|CAW93030.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus equi subsp. equi 4047]
Length = 342
Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 154/355 (43%), Positives = 211/355 (59%), Gaps = 19/355 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
M +FDF+LP IA P+ RD ++L+++ H + DH++ L DA+
Sbjct: 1 MNTNDFDFELPEELIAQTPLEQRDRSKLLIIDHQEHTMTDSHFDHIIDQL----EPGDAL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V NNT+V+ A+L G + + L + + W V A+P+K +K G + F
Sbjct: 57 VMNNTRVLPARLYGEKM----ETHGHVELLLLKNIQGDQWEVLAKPAKRLKAGAQISF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G RL+A VI + G ++ FS GI LE + +G +PLPPYI K R
Sbjct: 111 --GDGRLKARVIQELEHGGRIVEFSYDGIFLEI-LETLGEMPLPPYIHEKLADAER---- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT LL ++ + G+ + ++TLHVG GTF PV V++ D+H
Sbjct: 164 YQTVYAKENGSAAAPTAGLHFTQELLQKIEAKGVHLVYLTLHVGLGTFRPVSVDNIDEHD 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MHSE + AQ L VK+ GGRI++VGTTS+R LET ++ G I SG+TNIFI
Sbjct: 224 MHSEFYLLSEEAAQTLRKVKAAGGRIIAVGTTSIRTLETIGSKFQGQILADSGWTNIFIK 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
PGY+F+ VD +NFHLPKSTL+MLVSAF G + + Y+HAI YRF+S+GD
Sbjct: 284 PGYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYKHAIDEHYRFFSFGDA 338
>gi|93278505|pdb|1YY3|A Chain A, Structure Of S-Adenosylmethionine:trna Ribosyltransferase-
Isomerase (Quea)
gi|93278506|pdb|1YY3|B Chain B, Structure Of S-Adenosylmethionine:trna Ribosyltransferase-
Isomerase (Quea)
Length = 346
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 150/352 (42%), Positives = 212/352 (60%), Gaps = 17/352 (4%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
FDF+LP IA P+ RD++RLMV+ + ++D + +F N D +V NNT+
Sbjct: 10 FDFELPERLIAQVPLEQRDASRLMVLDKHTG---ELTDSSFKHIISFFNEGDCLVLNNTR 66
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSR 125
V+ A+L G + ++ L + + + W A+P+K +KKG ++ F G R
Sbjct: 67 VLPARLFGTK----EDTGAKVELLLLKQETGDKWETLAKPAKRVKKGTVVTF----GDGR 118
Query: 126 LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYA 185
L+A ++ G + F GI E SL G +PLPPYI K +D ++ YQT Y+
Sbjct: 119 LKAICTEELEHGGRKMEFQYDGIFYEVLESL-GEMPLPPYI--KEQLDDKER--YQTVYS 173
Query: 186 KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIG 245
K GS AAPTAGLHFT +L +L G+++ F+TLHVG GTF PV ++ ++H MH+E
Sbjct: 174 KEIGSAAAPTAGLHFTEEILQQLKDKGVQIEFITLHVGLGTFRPVSADEVEEHNMHAEFY 233
Query: 246 FIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGYRFR 304
+ TA ALN V+ GGRI+SVGTTS R LET E DG SG+T+IFI PGY F+
Sbjct: 234 QMSEETAAALNKVRENGGRIISVGTTSTRTLETIAGEHDGQFKASSGWTSIFIYPGYEFK 293
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
A+D +++NFHLPKS+L+MLVSA G E + Y HA+ YRF+S+GD L+
Sbjct: 294 AIDGMITNFHLPKSSLIMLVSALAGRENILRAYNHAVEEEYRFFSFGDAMLI 345
>gi|25010872|ref|NP_735267.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae NEM316]
gi|77413595|ref|ZP_00789782.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae 515]
gi|46577062|sp|Q8E611|QUEA_STRA3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|23095251|emb|CAD46461.1| Unknown [Streptococcus agalactiae NEM316]
gi|77160361|gb|EAO71485.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae 515]
Length = 342
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 159/354 (44%), Positives = 215/354 (60%), Gaps = 19/354 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
M +FDF LP IA P+ RD+++L+V+ H N + DH++ +L DA+
Sbjct: 1 MNTNDFDFYLPEELIAQTPLEKRDASKLLVIDHKNKTMTDSHFDHILDEL----KPGDAL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V NNT+V+ A+L G + I L + W V A+P+K ++ G + F
Sbjct: 57 VMNNTRVLPARLYGEK----PDTHGHIELLLLKNTEGDQWEVLAKPAKRLRVGTKVSF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G RL ATV + G ++ FS GI LE SL G +PLPPYI K ++ RD
Sbjct: 111 --GDGRLIATVTKELEHGGRIVEFSYDGIFLEVLESL-GEMPLPPYIHEK--LEDRDR-- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ D+H
Sbjct: 164 YQTVYAKENGSAAAPTAGLHFTKELLEKIETKGVKLVYLTLHVGLGTFRPVSVDNLDEHE 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MHSE + A LN+VK GGRIV+VGTTS+R LET ++ +G + SG+TNIFI
Sbjct: 224 MHSEFYQLSKEAADTLNAVKESGGRIVAVGTTSIRTLETIGSKFNGELKADSGWTNIFIK 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY+F+ VD +NFHLPKSTL+MLVSAF G + + Y HA+ YRF+S+GD
Sbjct: 284 PGYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYNHAVEERYRFFSFGD 337
>gi|168208647|ref|ZP_02634272.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens B str. ATCC 3626]
gi|170713009|gb|EDT25191.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens B str. ATCC 3626]
Length = 341
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 146/356 (41%), Positives = 207/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P+ RDS+RLMV+ I D+ +LN D +V
Sbjct: 1 MKVSDFYFELPEELIAQYPLEKRDSSRLMVLDKKTGE---IEHRKFHDILEYLNEGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + +I L R+ + W A+P + K G + F
Sbjct: 58 LNNTRVLPARLIGEK----EETGGKIEFLLLKRIEGDKWECLAKPGRKAKVGTVFTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+A V + G ++ F GI E+ + +G +PLPPYI K D Y
Sbjct: 111 -GEGKLKAIVREIGEEGNRIIEFKYDGI-FEQVLDELGQMPLPPYIHEK----LEDKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL + G+ + ++TLHVG GTF PVKV+D ++H+M
Sbjct: 165 QTVYSKEKGSAAAPTAGLHFTEELLKEIKDKGVNIAYLTLHVGLGTFRPVKVDDVNNHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D A+ +N K G R+++VGTTS R LET E+G + SG+T+IFI PG
Sbjct: 225 HSEYYHLDKENAELINKTKEAGNRVIAVGTTSSRTLETIGDENGRVREQSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STL+MLVSA G + Y A+ YRF+S+GD+ +
Sbjct: 285 YKFKIVDNLITNFHLPESTLIMLVSALAGQDNIMNAYNTAVKEKYRFFSFGDSMFI 340
>gi|225025895|ref|ZP_03715087.1| hypothetical protein EUBHAL_00123 [Eubacterium hallii DSM 3353]
gi|224956792|gb|EEG38001.1| hypothetical protein EUBHAL_00123 [Eubacterium hallii DSM 3353]
Length = 342
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 151/356 (42%), Positives = 205/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F+FDLP IA P+ R S+RLMV++ I+ + D+ +L+ D +V
Sbjct: 2 MKTSDFNFDLPQELIAQDPLEDRSSSRLMVLNKESG---EIAHRIFHDITEYLHPGDCLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + I L R + W +P K + G + F
Sbjct: 59 INDTKVIPARLIGTK----EDTGAHIEILLLKRKENDVWETLVKPGKKCRPGARVVF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A ++D G L+ F GI E + +G +PLPPYI K +D Y
Sbjct: 112 -GNGELKAEIVDVLEDGNRLVHFEYEGI-FEEVLDRLGQMPLPPYITHK----LQDKNRY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ +G+ + VTLHVG GTF PVKVE+ +H M
Sbjct: 166 QTVYAKYEGSAAAPTAGLHFTKELLKQIEDMGVNIARVTLHVGLGTFRPVKVENVLEHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ +N K GGRI++VGTTS R LE+ E+GII+P G T IFI PG
Sbjct: 226 HSEYYNVTETAAKMINDTKKNGGRIIAVGTTSTRTLESVADENGIIHPGCGNTEIFIYPG 285
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+A+D L++NFHLP+STLLMLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 286 YKFKAIDCLITNFHLPESTLLMLVSALAGKEHIMAAYKEAVKERYRFFSFGDAMFI 341
>gi|311069257|ref|YP_003974180.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
atrophaeus 1942]
gi|310869774|gb|ADP33249.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
atrophaeus 1942]
Length = 342
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 153/357 (42%), Positives = 214/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V+ FDF+LP IA P+ RD++RLMV+ + +SD ++ +F D +V
Sbjct: 1 MKVELFDFELPERLIAQVPLEQRDASRLMVLDKHTGG---LSDSSFKEIVSFFKEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L GV+ ++ L + + + W +P+K +KKG +L F
Sbjct: 58 LNNTRVLPARLFGVK----EDTGAKVELLLLKQETGDRWETLVKPAKRVKKGTVLTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A ++ G + F GI E SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGLLQAVCTEELEHGGRKVEFRYDGIFYEVLESL-GEMPLPPYI--KEQLDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT ++K GS AAPTAGLHFT +L L G+++ F+TLHVG GTF PV ++ ++H M
Sbjct: 165 QTVFSKEIGSAAAPTAGLHFTEEILGELKEKGVRIEFITLHVGLGTFRPVSADEVEEHNM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
H+E + A TA ALN V+ GGRIVSVGTTS R LET E +G SG+T+IFI P
Sbjct: 225 HAEFYEMSAETAAALNHVRETGGRIVSVGTTSTRTLETIAGENNGSFKASSGWTSIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D +++NFHLPKS+L+MLVSA G E + Y HA+ YRF+S+GD L+
Sbjct: 285 GYEFKAIDGMITNFHLPKSSLIMLVSALAGREHVLRAYNHAVEKEYRFFSFGDAMLI 341
>gi|110802898|ref|YP_699223.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens SM101]
gi|123047252|sp|Q0SRN4|QUEA_CLOPS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|110683399|gb|ABG86769.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens SM101]
Length = 341
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 146/356 (41%), Positives = 208/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P+ RDS+RLMV+ I D+ +LN D +V
Sbjct: 1 MKVSDFYFELPEELIAQYPLEKRDSSRLMVLDKKTGE---IEHRKFHDILEYLNEGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + +I L R+ + W A+P + K G + F
Sbjct: 58 LNNTRVLPARLIGEK----EETGGKIEFLLLKRIEGDKWECLAKPGRKAKVGTVFTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+A V + G ++ F GI E+ + +G +PLPPYI K D Y
Sbjct: 111 -GEGKLKAIVREIGEEGNRIIEFKYDGI-FEQVLDELGQMPLPPYIHEK----LEDKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT +LL + G+ + ++TLHVG GTF PVKV+D ++H+M
Sbjct: 165 QTVYSKEKGSAAAPTAGLHFTEDLLKEIKDKGVNIAYLTLHVGLGTFRPVKVDDVNNHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D A+ +N K G R+++VGTTS R LET E+G + SG+T+IFI PG
Sbjct: 225 HSEYYHLDKENAELINKTKEAGKRVIAVGTTSSRTLETIGDENGRVREQSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STL+MLVSA G + Y A+ YRF+S+GD+ +
Sbjct: 285 YKFKIVDNLITNFHLPESTLIMLVSALAGQDNIMNAYNTAVKEKYRFFSFGDSMFI 340
>gi|291546236|emb|CBL19344.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Ruminococcus sp. SR1/5]
Length = 341
Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 206/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R S+RLM H +L + H +D+ +L+ D +V
Sbjct: 1 MKTSDFYYDLPQELIAQDPLEDRSSSRLM--HLSLKDGSIEHRHF-TDILDYLHKGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G H I L R + W +P K + G + F
Sbjct: 58 INDTKVIPARLYG----HKEETGALIEILLLKRRENDIWECLVKPGKKARPGAKITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+ +ID + G L+ F GI E + +G +PLPPYI K +D Y
Sbjct: 111 -GDGILKGEIIDIVDEGNRLIQFHYEGI-FEEILDQLGEMPLPPYITHK----LKDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ G+ + VTLHVG GTF PVKV+D + H M
Sbjct: 165 QTVYAKNEGSAAAPTAGLHFTPELLEKVKEKGVNIAHVTLHVGLGTFRPVKVDDVEKHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +N K GGR++SVGTTS R LE+A EDGI+ SG+T IFI PG
Sbjct: 225 HSEFYIVEEDQAKLINDTKKNGGRVISVGTTSCRTLESAAGEDGIVKAGSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+A+D L++NFHLP+STLLMLVSA G E Y+ A+ YRF+S+GD ++
Sbjct: 285 YKFKAIDGLITNFHLPESTLLMLVSALAGKEHIMAAYEEAVKERYRFFSFGDAMMI 340
>gi|225181933|ref|ZP_03735367.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Dethiobacter alkaliphilus AHT 1]
gi|225167373|gb|EEG76190.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Dethiobacter alkaliphilus AHT 1]
Length = 342
Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 151/356 (42%), Positives = 207/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EFD++LP IA P+ R+++RL+++H + SD+ + L + D +V
Sbjct: 1 MHLSEFDYELPEELIAQVPLTDREASRLLILHRKSGA---VEHGNFSDILSHLQAGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G + E L R W +P + ++ G + F
Sbjct: 58 LNDTKVLPARLTGRKKGGGAMAE----VLLLTRKDKACWEALVKPGRRLRPGAEVEF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L A + ++ G L+ F GI E + +G +PLPPYI K D Y
Sbjct: 111 -GNGELTAVIKEELADGTRLVEFRYDGI-FEEVLDRLGEMPLPPYITEKLA----DRQRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL+ GI V ++TLHVG GTF PVK ED +H M
Sbjct: 165 QTVYAKNEGSAAAPTAGLHFTPRLLAEAQDRGINVVYLTLHVGLGTFRPVKTEDIREHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I +AQ LNS + GGRIV+VGTTS R+LET +DG IN SG+T+IFI PG
Sbjct: 225 HSEYYNISPESAQILNSCRRAGGRIVAVGTTSCRVLETVAQDDGTINAGSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF+ V+ L++NFHLPKSTL+M++SAF G + Y+ A+ YRF+S+GD L+
Sbjct: 285 YRFKTVNALLTNFHLPKSTLIMMISAFAGRDNVLNAYREAVQERYRFFSFGDAMLI 340
>gi|157826819|ref|YP_001495883.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
bellii OSU 85-389]
gi|166216747|sp|A8GVG9|QUEA_RICB8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|157802123|gb|ABV78846.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
bellii OSU 85-389]
Length = 353
Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 152/375 (40%), Positives = 224/375 (59%), Gaps = 39/375 (10%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA P+ RD + L++ S + ++ +L D +V
Sbjct: 1 MKLSDFDFDLPLELIAQNPISKRDESNLLIA----STQQYVKTKFY-NIIDYLKEGDLLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS---------------WSVYARP 105
FNN+KVI A+L+ +K I+ L+ R+ N WS +A+P
Sbjct: 56 FNNSKVIKAKLS---------LDKNITINLNQRLKDNRRATNDDAGRLKSIDYWSAFAKP 106
Query: 106 SKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPY 165
++ +K GD +F + + + +K GEI + F ++ I + + G +PLP Y
Sbjct: 107 ARKLKVGDEFYFDNH------KIIITEKLEMGEIKIKFELANISVFEFLDKYGEMPLPLY 160
Query: 166 IARKRPIDAR-DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
I KRP + D YQT Y+ IQGSVAAPTAGLHFT++++++L + G++V FVTLHVGA
Sbjct: 161 I--KRPERQKSDDERYQTVYSNIQGSVAAPTAGLHFTNDIINKLKAKGVQVAFVTLHVGA 218
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDG 284
GTFMPVK E+ ++H MH+E I TA +N K RI++VGTTSLR LE++ +G
Sbjct: 219 GTFMPVKTENINEHKMHTEYCSITPETAAIINKAKKEKRRIIAVGTTSLRTLESSGI-NG 277
Query: 285 IINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHA 344
+N T+IFITPG++F+ VD+L++NFH PKSTL MLV AF G +E ++Y++AI
Sbjct: 278 NVNSGDFETDIFITPGFKFQIVDMLLTNFHFPKSTLFMLVCAFAGFKEMHELYKYAIEEQ 337
Query: 345 YRFYSYGDTSLLFQK 359
RF+SYGD +LL++K
Sbjct: 338 MRFFSYGDATLLYKK 352
>gi|312877417|ref|ZP_07737381.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor lactoaceticus 6A]
gi|311795806|gb|EFR12171.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor lactoaceticus 6A]
Length = 346
Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 152/359 (42%), Positives = 212/359 (59%), Gaps = 24/359 (6%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+F +DLP IA +PV PRDS+RLMV+ P+ + I + ++ +LN D +V NN+
Sbjct: 8 DFHYDLPEELIAQKPVEPRDSSRLMVILPDGT----IEHRIFREIVEYLNEGDCLVLNNS 63
Query: 65 KVITAQLNGVRFCHINRREKE---ISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
KVI A+L I +RE I L R+ N+W V RP K +KG F
Sbjct: 64 KVIPARL-------IGQREDTGSFIEFLLVKRLDINTWEVMTRPGKKARKGRKFVF---- 112
Query: 122 GQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A V+ + G ++ F G+ E + +G IPLPPYI K +D D Y
Sbjct: 113 GNGELKAEVLHVNQDEGTRIVRFYYEGV-FEEVLERLGKIPLPPYI--KEELD--DLSRY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K+ GS AAPTAGLHFT LL R+ G+++ +VTLHVG GTF PVKVE+ ++H M
Sbjct: 168 QTVYSKVPGSAAAPTAGLHFTEELLDRISKKGVEILYVTLHVGLGTFKPVKVENVEEHKM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I A +N K G R+++VGTTS R+LE+ + E G + G+T+IFI PG
Sbjct: 228 HEEYYEISQDVADKINRAKEVGKRVIAVGTTSCRVLESCSDETGRVKAKKGWTDIFIYPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
Y F+ +D L++NFHLP +TL+MLV AF G E Y+ A+ YRF+S+GD L+ ++
Sbjct: 288 YNFKVLDGLVTNFHLPDTTLMMLVCAFGGYERIMNAYKIAVDMRYRFFSFGDAMLILRR 346
>gi|312128550|ref|YP_003993424.1| s-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor hydrothermalis 108]
gi|311778569|gb|ADQ08055.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor hydrothermalis 108]
Length = 346
Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 151/359 (42%), Positives = 211/359 (58%), Gaps = 24/359 (6%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+F +DLP IA +PV PRDS+RLMV+ P+ + + D+ +LN D +V NN+
Sbjct: 8 DFHYDLPDELIAQKPVEPRDSSRLMVILPDGR----LEHRIFRDIVEYLNEGDCLVLNNS 63
Query: 65 KVITAQLNGVRFCHINRREKE---ISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
KVI A+L I +RE I L R+ N+W V RP K +KG F
Sbjct: 64 KVIPARL-------IGQREDTGSFIEFLLVKRLDINTWEVMTRPGKKARKGRKFVF---- 112
Query: 122 GQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A V+ G ++ F G+ E + +G IPLPPYI K +D D Y
Sbjct: 113 GNGELKAEVLHVNQEEGTRIVRFYYEGV-FEEVLERLGKIPLPPYI--KEELD--DLSRY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K+ GS AAPTAGLHFT LL ++ G+++ +VTLHVG GTF PVKVE+ ++H M
Sbjct: 168 QTVYSKVPGSAAAPTAGLHFTEELLEKISKKGVEILYVTLHVGLGTFKPVKVENVEEHKM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I A+ +N K G R+++VGTTS R+LE+ E+G + G+T+IFI PG
Sbjct: 228 HEEYYEISEDVAERINRAKELGKRVIAVGTTSCRVLESCCDENGKVRAKKGWTDIFIYPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
Y F+ +D L++NFHLP +TL+MLV AF G E Y+ A+ YRF+S+GD L+ ++
Sbjct: 288 YEFKVLDGLVTNFHLPDTTLMMLVCAFGGYERIMNAYKIAVDMRYRFFSFGDAMLILRR 346
>gi|308174473|ref|YP_003921178.1| S-adenosylmethionine tRNA ribosyltransferase-isomerase [Bacillus
amyloliquefaciens DSM 7]
gi|307607337|emb|CBI43708.1| S-adenosylmethionine tRNA ribosyltransferase-isomerase [Bacillus
amyloliquefaciens DSM 7]
gi|328554393|gb|AEB24885.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
amyloliquefaciens TA208]
gi|328912798|gb|AEB64394.1| S-adenosylmethionine tRNA ribosyltransferase-isomerase [Bacillus
amyloliquefaciens LL3]
Length = 342
Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 151/357 (42%), Positives = 212/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP IA P+ RD++RLMV+ ++D ++ +F D +V
Sbjct: 1 MKVDLFDFELPERLIAQVPLKERDASRLMVLDKQTGG---LTDSSFKEIVSFFKEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + ++ L + ++W +P+K ++KG IL F
Sbjct: 58 LNNTRVLPARLFGTK----EDTGAKVELLLLKQEENDTWETLVKPAKRVRKGTILTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A ++ + G + F GI E SL G +PLPPYI K +D ++ Y
Sbjct: 111 -GDGRLTAVCTEELDHGGRKIKFRYDGIFYEVLESL-GEMPLPPYI--KEQLDDKER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT ++K GS AAPTAGLHFT +L L G+++ F+TLHVG GTF PV +D ++H M
Sbjct: 165 QTVFSKEIGSAAAPTAGLHFTEEILDELKQKGVRIEFITLHVGLGTFRPVSADDVEEHNM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
H+E + TA +LN V+ GGRIVSVGTTS R LET E DG+ SG+T+IFI P
Sbjct: 225 HAEFYEMTEETAASLNEVRKAGGRIVSVGTTSTRTLETIAGEHDGVFTASSGWTSIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D +++NFHLPKS+L+MLVSA G E Y+HA+ YRF+S+GD L+
Sbjct: 285 GYEFKAIDGMITNFHLPKSSLIMLVSALAGREHVLSAYRHAVEEEYRFFSFGDAMLI 341
>gi|18310928|ref|NP_562862.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens str. 13]
gi|110799784|ref|YP_696626.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens ATCC 13124]
gi|168204870|ref|ZP_02630875.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens E str. JGS1987]
gi|168214133|ref|ZP_02639758.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens CPE str. F4969]
gi|168215572|ref|ZP_02641197.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens NCTC 8239]
gi|182624446|ref|ZP_02952230.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens D str. JGS1721]
gi|21263867|sp|Q8XJ15|QUEA_CLOPE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|123344605|sp|Q0TP14|QUEA_CLOP1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|18145610|dbj|BAB81652.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens str. 13]
gi|110674431|gb|ABG83418.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens ATCC 13124]
gi|170663657|gb|EDT16340.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens E str. JGS1987]
gi|170714349|gb|EDT26531.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens CPE str. F4969]
gi|177910449|gb|EDT72826.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens D str. JGS1721]
gi|182382391|gb|EDT79870.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens NCTC 8239]
Length = 341
Score = 273 bits (699), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 146/356 (41%), Positives = 207/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P+ RDS+RLMV+ I D+ +LN D +V
Sbjct: 1 MKVSDFYFELPEELIAQYPLEKRDSSRLMVLDKKTGE---IEHRKFHDILEYLNEGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + +I L R+ + W A+P + K G + F
Sbjct: 58 LNNTRVLPARLIGEK----EETGGKIEFLLLKRIEGDKWECLAKPGRKAKVGTVFTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+A V + G ++ F GI E+ + +G +PLPPYI K D Y
Sbjct: 111 -GEGKLKAIVREIGEEGNRIIEFKYDGI-FEQVLDELGQMPLPPYIHEK----LEDKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL + G+ + ++TLHVG GTF PVKV+D ++H+M
Sbjct: 165 QTVYSKEKGSAAAPTAGLHFTEELLKEIKDKGVNIAYLTLHVGLGTFRPVKVDDVNNHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D A+ +N K G R+++VGTTS R LET E+G + SG+T+IFI PG
Sbjct: 225 HSEYYHLDKENAELINKTKEAGKRVIAVGTTSSRTLETIGDENGRVREQSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STL+MLVSA G + Y A+ YRF+S+GD+ +
Sbjct: 285 YKFKIVDNLITNFHLPESTLIMLVSALAGQDNIMNAYNTAVKEKYRFFSFGDSMFI 340
>gi|319744823|gb|EFV97162.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae ATCC 13813]
Length = 342
Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 157/354 (44%), Positives = 215/354 (60%), Gaps = 19/354 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
M +FDF LP IA P+ RD+++L+V+ H N + DH++ +L DA+
Sbjct: 1 MNTNDFDFYLPEELIAQTPLEKRDASKLLVIDHKNKTMADSHFDHILDEL----KPGDAL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V NNT+V+ A+L G + + L + W V A+P+K ++ G + F
Sbjct: 57 VMNNTRVLPARLYGEK----PDTHGHVELLLLKNTEGDQWEVLAKPAKRLRVGTKVSF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G RL ATV + G ++ FS GI LE SL G +PLPPYI K ++ RD
Sbjct: 111 --GDGRLIATVTKELEHGGRIVEFSYDGIFLEVLESL-GEMPLPPYIHEK--LEDRDR-- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ D+H
Sbjct: 164 YQTVYAKENGSAAAPTAGLHFTKELLEKIETKGVKLVYLTLHVGLGTFRPVSVDNLDEHE 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MHSE + A LN+VK GGRI++VGTTS+R LET ++ +G + SG+TNIFI
Sbjct: 224 MHSEFYQLSKEAADTLNAVKESGGRIIAVGTTSIRTLETIGSKFNGELKADSGWTNIFIK 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY+F+ VD +NFHLPKSTL+MLVSAF G + + Y HA+ YRF+S+GD
Sbjct: 284 PGYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYNHAVEERYRFFSFGD 337
>gi|331083879|ref|ZP_08332988.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lachnospiraceae bacterium 6_1_63FAA]
gi|330403304|gb|EGG82864.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lachnospiraceae bacterium 6_1_63FAA]
Length = 341
Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 209/358 (58%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISD--HLVSDLPAFLNSNDA 58
M +F +DLP IA P+ R S+RLM + + + +D H++ +LN D
Sbjct: 1 MRTADFYYDLPEELIAQDPLLDRSSSRLMHLDKQ-TGEICHTDFKHIID----YLNPEDC 55
Query: 59 IVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
+V N+T+VI A+L G + + I L R N W +P K K G + F
Sbjct: 56 LVINDTRVIPARLYGSKVG----TDAGIEILLLKRRENNIWETLVKPGKKAKPGTKISF- 110
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
G L V+D G L+ F GI E + +G +PLPPYI K +D
Sbjct: 111 ---GDGLLIGEVLDIVEEGNRLIQFQYEGI-FEEILDKLGEMPLPPYITHK----LQDKE 162
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YAK +GS AAPTAGLHFT LL + G+K+ VTLHVG GTF PVKV+D + H
Sbjct: 163 RYQTVYAKNEGSAAAPTAGLHFTKELLKEIEEKGVKIAHVTLHVGLGTFRPVKVDDVESH 222
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE ++ A+ +N K++GGR++SVGTTS R LE+AT E+GI+ SG+T+IFI
Sbjct: 223 HMHSEFYVVEEEQAKIINETKAKGGRVISVGTTSCRTLESATDENGILQAKSGWTDIFIY 282
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+F+ +D L++NFHLP+STLLMLVSA G E+ Y+ A+ YRF+S+GD ++
Sbjct: 283 PGYQFKMIDALITNFHLPESTLLMLVSALAGKEKIMNAYEEAVKERYRFFSFGDAMII 340
>gi|260587878|ref|ZP_05853791.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Blautia
hansenii DSM 20583]
gi|260542143|gb|EEX22712.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Blautia
hansenii DSM 20583]
Length = 355
Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 209/358 (58%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISD--HLVSDLPAFLNSNDA 58
M +F +DLP IA P+ R S+RLM + + + +D H++ +LN D
Sbjct: 15 MRTADFYYDLPEELIAQDPLLDRSSSRLMHLDKQ-TGEICHTDFKHIID----YLNPEDC 69
Query: 59 IVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
+V N+T+VI A+L G + + I L R N W +P K K G + F
Sbjct: 70 LVINDTRVIPARLYGSKVG----TDAGIEILLLKRRENNIWETLVKPGKKAKPGTKISF- 124
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
G L V+D G L+ F GI E + +G +PLPPYI K +D
Sbjct: 125 ---GDGLLIGEVLDIVEEGNRLIQFQYEGI-FEEILDKLGEMPLPPYITHK----LQDKE 176
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YAK +GS AAPTAGLHFT LL + G+K+ VTLHVG GTF PVKV+D + H
Sbjct: 177 RYQTVYAKNEGSAAAPTAGLHFTKELLKEIEEKGVKIAHVTLHVGLGTFRPVKVDDVESH 236
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE ++ A+ +N K++GGR++SVGTTS R LE+AT E+GI+ SG+T+IFI
Sbjct: 237 HMHSEFYVVEEEQAKIINETKAKGGRVISVGTTSCRTLESATDENGILQAKSGWTDIFIY 296
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+F+ +D L++NFHLP+STLLMLVSA G E+ Y+ A+ YRF+S+GD ++
Sbjct: 297 PGYQFKMIDALITNFHLPESTLLMLVSALAGKEKIMNAYEEAVKERYRFFSFGDAMII 354
>gi|302389934|ref|YP_003825755.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Thermosediminibacter oceani DSM 16646]
gi|302200562|gb|ADL08132.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Thermosediminibacter oceani DSM 16646]
Length = 341
Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 144/356 (40%), Positives = 213/356 (59%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+F ++LP IA P+ RD++RLMVV + + + ++ +L D +V
Sbjct: 1 MDVKDFYYELPEELIAQEPLEKRDTSRLMVVKRDTR---IFEHRIFENITEYLEEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L GV+ +I L R+ N+W V +P + + G + F
Sbjct: 58 LNDTRVMPARLLGVK----EDTGGKIEFVLLKRIKENTWEVLVKPGRRARIGSVFVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V+D + G ++ F GI E+ + +G +P+PPYI + + +D Y
Sbjct: 111 -GDGRLRAKVLDFTDAGGRIVEFYYDGI-FEQVLDELGQMPVPPYIKK----ELKDKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GS AAPTAGLHFT LL ++ G+K+ ++TLHVG GTF PVKV + ++H M
Sbjct: 165 QTVYARNPGSAAAPTAGLHFTEELLRKIEQNGVKICYITLHVGLGTFRPVKVRNIEEHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + + A+ +N K G R+++VGTTS R LET ++G + SG+T++FI PG
Sbjct: 225 HHEYFEVGSHAAETINRAKESGKRVIAVGTTSTRTLETVADQNGFVKSGSGWTDLFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF+ VD +++NFHLP+STLLMLVSAF G + Y+ AI YRFYS+GD L+
Sbjct: 285 YRFKVVDGMVTNFHLPESTLLMLVSAFAGRDLIMAAYREAIDKRYRFYSFGDAMLI 340
>gi|284052392|ref|ZP_06382602.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Arthrospira
platensis str. Paraca]
Length = 405
Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 159/368 (43%), Positives = 206/368 (55%), Gaps = 26/368 (7%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D++LPP RIA PV PRDS+RL+VV P L DLP L D ++ N
Sbjct: 45 LQGYDYELPPDRIAQNPVIPRDSSRLLVV----DSPQSHQHRLFRDLPDLLQPQDLLILN 100
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NT+V+ A+L G + R I L +PN W +P K K GD L F S+ G
Sbjct: 101 NTRVLPARLYGRK-----SRSAAIEILLLQEQAPNCWLALVKPGKRFKIGDRLEFQSKSG 155
Query: 123 QSRLEATVID-KWNTGEILLVFSI-SGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L ATVID +TG LL F + G L + G IP PPY+ + + + Y
Sbjct: 156 GEILYATVIDTNPSTGGRLLKFEVPQGQSLVSILDQFGEIPFPPYVTDSQALAEQ----Y 211
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y G+VAAPTAGLHFT L RL I FVTLHVG GTF PV+VED H M
Sbjct: 212 QTIYGDRPGAVAAPTAGLHFTEQLFQRLSQQHIDHAFVTLHVGLGTFRPVEVEDITTHQM 271
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE----TATTEDGIINPWSGFTNIF 296
H+E + T + +N ++RGGRI++VGTT +R LE + D I P+ G N+F
Sbjct: 272 HAEWVELPPETVEKINQTRARGGRIIAVGTTVVRTLEGIAAAQNSGDRSIQPYCGEINLF 331
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHA-------YRFYS 349
I PGYR+R +D L++NFHLP+S+LLMLVSA G E K+YQ A+ YRFYS
Sbjct: 332 IYPGYRWRVIDGLITNFHLPRSSLLMLVSALIGRERLMKLYQDALEQPPNDFGNRYRFYS 391
Query: 350 YGDTSLLF 357
+GD L+
Sbjct: 392 FGDAMLIL 399
>gi|167766704|ref|ZP_02438757.1| hypothetical protein CLOSS21_01210 [Clostridium sp. SS2/1]
gi|317497532|ref|ZP_07955851.1| tRNA ribosyltransferase-isomerase [Lachnospiraceae bacterium
5_1_63FAA]
gi|167711641|gb|EDS22220.1| hypothetical protein CLOSS21_01210 [Clostridium sp. SS2/1]
gi|316895215|gb|EFV17378.1| tRNA ribosyltransferase-isomerase [Lachnospiraceae bacterium
5_1_63FAA]
Length = 342
Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 150/356 (42%), Positives = 203/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R S+RL+ + N I + ++ +L D +V
Sbjct: 1 MKVSDFTFDLPEELIAQDPLEDRSSSRLLTLDKNTGE---IGHDVFHNIVNYLKPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L G + ++ L R N W +P K + G + F
Sbjct: 58 LNNTKVIPARLIGAK----EETGGKVEVLLLKRKQDNVWETLVKPGKKARPGARISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L VID + G L+ F GI E + +G +PLPPYI + +D Y
Sbjct: 111 -GDGKLVGEVIDVVDEGNRLVKFEYEGI-FEEVLDELGQMPLPPYITHQ----LKDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ +G+ + +VTLHVG GTF PVKV+D +H M
Sbjct: 165 QTVYAKYDGSAAAPTAGLHFTKELLQQIKDMGVNIAYVTLHVGLGTFRPVKVDDVLEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I+ A+ +N K GGR++SVGTTS R LE+ EDG ++ SG+T+IFI PG
Sbjct: 225 HSEFYRIEEEDAELINETKKNGGRVISVGTTSTRTLESVAEEDGTLHAKSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STLLMLVSA G E Y A+ YRF+S+GD +
Sbjct: 285 YKFKVIDGLITNFHLPESTLLMLVSALAGREHILNAYNIAVKERYRFFSFGDAMFI 340
>gi|291566847|dbj|BAI89119.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Arthrospira
platensis NIES-39]
Length = 441
Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 159/368 (43%), Positives = 206/368 (55%), Gaps = 26/368 (7%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D++LPP RIA PV PRDS+RL+VV P L DLP L D ++ N
Sbjct: 81 LQGYDYELPPDRIAQNPVIPRDSSRLLVV----DSPQSHQHRLFRDLPDLLQPQDLLILN 136
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NT+V+ A+L G + R I L +PN W +P K K GD L F S+ G
Sbjct: 137 NTRVLPARLYGRK-----SRSAAIEILLLQEQAPNCWLALVKPGKRFKIGDRLEFQSKSG 191
Query: 123 QSRLEATVID-KWNTGEILLVFSI-SGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L ATVID +TG LL F + G L + G IP PPY+ + + + Y
Sbjct: 192 GEILYATVIDTNPSTGGRLLKFEVPQGQSLVSILDQFGEIPFPPYVTDSQALAEQ----Y 247
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y G+VAAPTAGLHFT L RL I FVTLHVG GTF PV+VED H M
Sbjct: 248 QTIYGDRPGAVAAPTAGLHFTEQLFQRLSQQHIDHAFVTLHVGLGTFRPVEVEDITTHQM 307
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE----TATTEDGIINPWSGFTNIF 296
H+E + T + +N ++RGGRI++VGTT +R LE + D I P+ G N+F
Sbjct: 308 HAEWVELPPETVEKINQTRARGGRIIAVGTTVVRTLEGIAAAQNSGDRSIQPYCGEINLF 367
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHA-------YRFYS 349
I PGYR+R +D L++NFHLP+S+LLMLVSA G E K+YQ A+ YRFYS
Sbjct: 368 IYPGYRWRVIDGLITNFHLPRSSLLMLVSALIGRERLMKLYQDALEQPPNDFGNRYRFYS 427
Query: 350 YGDTSLLF 357
+GD L+
Sbjct: 428 FGDAMLIL 435
>gi|169343759|ref|ZP_02864758.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens C str. JGS1495]
gi|169298319|gb|EDS80409.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens C str. JGS1495]
Length = 341
Score = 273 bits (697), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 146/356 (41%), Positives = 207/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P+ RDS+RLMV+ I D+ +LN D +V
Sbjct: 1 MKVSDFYFELPEELIAQYPLEKRDSSRLMVLDKKTGE---IEHRKFHDILEYLNEGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + +I L R+ + W A+P + K G + F
Sbjct: 58 LNNTRVLPARLIGEK----EETGGKIEFLLLKRIEGDKWECLAKPGRKAKVGTVFTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+A V + G ++ F GI E+ + +G +PLPPYI K D Y
Sbjct: 111 -GEGKLKAIVREIGEEGNRIIEFKYDGI-FEQVLDELGQMPLPPYIHEK----LEDKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL + G+ + ++TLHVG GTF PVKV+D ++H+M
Sbjct: 165 QTVYSKEKGSAAAPTAGLHFTEELLKEIKDKGVNIAYLTLHVGLGTFRPVKVDDVNNHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D A+ +N K G R+++VGTTS R LET E+G + SG+T+IFI PG
Sbjct: 225 HSEYYHLDKENAELINKTKEVGKRVIAVGTTSSRTLETIGDENGRVREQSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STL+MLVSA G + Y A+ YRF+S+GD+ +
Sbjct: 285 YKFKIVDNLITNFHLPESTLIMLVSALAGQDNIMNAYNTAVKEKYRFFSFGDSMFI 340
>gi|302870943|ref|YP_003839579.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor obsidiansis OB47]
gi|302573802|gb|ADL41593.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor obsidiansis OB47]
Length = 346
Score = 273 bits (697), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 149/359 (41%), Positives = 210/359 (58%), Gaps = 24/359 (6%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+F +DLP IA +PV PRD++RLMV+ P+ + I + D+ +LN D +V NN+
Sbjct: 8 DFHYDLPDELIAQKPVEPRDNSRLMVILPDGT----IEHRIFRDIVEYLNEGDCLVLNNS 63
Query: 65 KVITAQLNGVRFCHINRREKE---ISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
KVI A+L I +RE I L R+ N+W V RP K ++G F
Sbjct: 64 KVIPARL-------IGQREDTGSFIEFLLVKRLDINTWEVMTRPGKKARRGRKFVF---- 112
Query: 122 GQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A V+ + G ++ F G+ E + +G IPLPPYI + D Y
Sbjct: 113 GNGELKAEVLHVNQDEGTRIVRFYYEGV-FEEVLEKLGKIPLPPYIKE----ELEDLSRY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K+ GS AAPTAGLHFT LL ++ G+++ +VTLHVG GTF PVKVE+ ++H M
Sbjct: 168 QTVYSKVPGSAAAPTAGLHFTEELLEKISKKGVEILYVTLHVGLGTFKPVKVENVEEHKM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I A +N K G R+++VGTTS R+LE+ + E G + G+TNIFI PG
Sbjct: 228 HEEYYEISQDVADRINRAKELGKRVIAVGTTSCRVLESCSDEAGRVKAQKGWTNIFIYPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
Y F+ +D L++NFHLP +TL+MLV AF G E Y+ A+ YRF+S+GD L+ ++
Sbjct: 288 YNFKVLDGLVTNFHLPDTTLMMLVCAFGGYERIMNAYKIAVDMRYRFFSFGDAMLILRR 346
>gi|312134251|ref|YP_004001589.1| s-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor owensensis OL]
gi|311774302|gb|ADQ03789.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor owensensis OL]
Length = 345
Score = 272 bits (696), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 149/358 (41%), Positives = 210/358 (58%), Gaps = 24/358 (6%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+F +DLP IA +PV PRDS+RLMV+ P+ + I + D+ +LN D +V NN+
Sbjct: 8 DFHYDLPDELIAQKPVEPRDSSRLMVILPDGT----IEHRIFRDIVEYLNEGDCLVLNNS 63
Query: 65 KVITAQLNGVRFCHINRREKE---ISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
KVI A+L I +RE I L R+ N+W V RP K ++G F
Sbjct: 64 KVIPARL-------IGQREDTGSFIEFLLVKRLDINTWEVMTRPGKKARRGRKFIF---- 112
Query: 122 GQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A V+ + G ++ F G+ E + +G IPLPPYI + D Y
Sbjct: 113 GNGELKAKVLHVNQDEGTRIVRFYYEGV-FEEVLEKLGKIPLPPYIKE----ELEDLSRY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K+ GS AAPTAGLHFT LL ++ G+++ +VTLHVG GTF PVKVE+ ++H M
Sbjct: 168 QTVYSKVPGSAAAPTAGLHFTEELLKKIEEKGVEILYVTLHVGLGTFKPVKVENIEEHRM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I A +N K G R+++VGTTS R+LE+ + E+G + G+T+IFI PG
Sbjct: 228 HDEYYEISQEVADRINKAKEFGKRVIAVGTTSCRVLESCSDENGRLKAKKGWTDIFIYPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y F+ +D L++NFHLP +TL+MLV AF G E Y+ A+ YRF+S+GD L+ +
Sbjct: 288 YEFKVLDGLVTNFHLPDTTLMMLVCAFGGYERIMNAYKIAVEMKYRFFSFGDAMLILR 345
>gi|326791986|ref|YP_004309807.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Clostridium
lentocellum DSM 5427]
gi|326542750|gb|ADZ84609.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Clostridium
lentocellum DSM 5427]
Length = 340
Score = 272 bits (696), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 205/356 (57%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F F LP +IA P+ R ++RLMV+ I D+ A+L D +V
Sbjct: 1 MKTSDFYFHLPEEQIAQVPLKDRTTSRLMVLDQKTG---EIEHKHFYDIKAYLKPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G R ++ L R W V +P K K GD + F
Sbjct: 58 LNDTRVIPARLFGARPSG-----GKVEFLLLTRKEEKRWEVLVKPGKKAKIGDEIIF--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L+A V + G+ ++ F GI E + +G +PLPPYI K D Y
Sbjct: 110 -GEGLLKAKVEEIIEDGKRIVRFEYEGI-FEEVLDALGEMPLPPYIHEK----LEDKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL + +G+K+ +VTLHVG GTF PVKVED +H M
Sbjct: 164 QTVYSKHEGSAAAPTAGLHFTKELLKEIEEMGVKIAYVTLHVGLGTFRPVKVEDVLNHEM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ID A +N VK+ GGR+++VGTTS R LE+ E G+I SG+TNIFI PG
Sbjct: 224 HSEYYSIDEENATIINKVKAEGGRVIAVGTTSTRTLESNADEKGLIKAGSGWTNIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+ V+ L++NFHLP+STL+MLVSA G E Y A++ YRF+S+GD L+
Sbjct: 284 YTFKCVEELITNFHLPESTLIMLVSALAGKEAILNAYNTAVNEGYRFFSFGDAMLI 339
>gi|238926810|ref|ZP_04658570.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Selenomonas flueggei ATCC 43531]
gi|238885342|gb|EEQ48980.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Selenomonas flueggei ATCC 43531]
Length = 343
Score = 272 bits (696), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 153/360 (42%), Positives = 215/360 (59%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+ LP +IA P PRDS+R+MV+ P I L +L D ++
Sbjct: 1 MNISDFDYFLPEEQIAQVPADPRDSSRMMVLSPKTQS---IEHRHFYQLDEYLTDGDVLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L GVR + E L ++ + W V +P K ++ G ++ F +
Sbjct: 58 FNDTRVIPARLIGVRQPTGGKAE----VFLLRQLERDRWEVLVKPGKKMRVGSVITFGHE 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L V+ + G ++ FS GI E + +GT+PLPPYI D Y
Sbjct: 114 -----LSCEVLAYTDFGGRIVKFSYEGI-FEEILDRLGTMPLPPYIHET----LEDPERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ +GS AAPTAGLHFT +L+ RL G+ + FVTLHVG GTF PV+V++ +DH+M
Sbjct: 164 QTIYSREKGSAAAPTAGLHFTESLMDRLRKKGVHLGFVTLHVGLGTFRPVQVDEIEDHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I TA + K G R+V+VGTTS+R LE+A + G+I G TNIFI PG
Sbjct: 224 HSEFYSIPTETADLIRMAKQEGRRVVAVGTTSIRTLESAAVDHGMIEEKRGQTNIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
Y+F+ VD +++NFHLPKSTL+MLVSAF G E T + Y+ A+ YRF+S+GD ++L Q R
Sbjct: 284 YQFKIVDAVITNFHLPKSTLIMLVSAFAGREFTLQAYRTAVEENYRFFSFGD-AMLIQSR 342
>gi|70726282|ref|YP_253196.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus haemolyticus JCSC1435]
gi|91207406|sp|Q4L6Y5|QUEA_STAHJ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|68447006|dbj|BAE04590.1| S-adenosylmethionine tRNA ribosyltransferase [Staphylococcus
haemolyticus JCSC1435]
Length = 341
Score = 272 bits (695), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 154/356 (43%), Positives = 213/356 (59%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V+EFD+DLP S IA P+ RD +RL+V+ N I D+ +L + D +V
Sbjct: 1 MNVEEFDYDLPESLIAQTPLKDRDQSRLLVLGRNSGN---IEHKHFKDVINYLETGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + R+ N W V +P+K IK G+ L F
Sbjct: 58 LNDTRVMPARLFGLK----EETGAKVEMLMLTRIENNDWEVLLKPAKRIKVGNKLSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ ++ A I++ + G ++ GI LE +++ +G +PLPPYI K +D D Y
Sbjct: 111 -GEGKIIAECIEELDQGGRIMRLHYEGI-LEERLNELGEMPLPPYI--KERLDDPDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + + GI + F+TLHVG GTF PV VED +DH M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTDELLDEIRAKGINIAFITLHVGLGTFRPVSVEDINDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN K G RI+SVGTTS R LET + SG+T+IFI PG
Sbjct: 225 HSEYYQMTQETANLLNQTKKEGHRIISVGTTSTRTLETIRRDYNEFVAVSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ ++A+D L++NFHLPKSTL+MLVSAF E Y+ A+ YRF+S+GD L+
Sbjct: 285 FTYKAIDGLITNFHLPKSTLVMLVSAFSSRENILNAYKEAVKLEYRFFSFGDAMLI 340
>gi|299822808|ref|ZP_07054694.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
grayi DSM 20601]
gi|299816337|gb|EFI83575.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
grayi DSM 20601]
Length = 342
Score = 272 bits (695), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 152/353 (43%), Positives = 212/353 (60%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R ++RLMV++ I D + + +L DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTASRLMVLNKETGA---IDDKHFASIVDYLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L+G++ + I L + + N W +P+K I+ G + F
Sbjct: 58 LNNTRVLPARLHGLK----DETGAHIEVLLLKQKADNEWETLVKPAKRIRVGQTITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A ++ G +L F GI E + +G +PLPPYI + R Y
Sbjct: 111 -GNGELKAVCKEELEHGGRILEFHYEGIFYE-VLENLGEMPLPPYIKEQLEDQGR----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ G+KV F+TLHVG GTF PV V DTD+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEALLDQIREKGVKVIFLTLHVGLGTFRPVDVADTDNHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + A L+ VK+ G RI++VGTTS+R LET A+ +G + SG+T+IFI+P
Sbjct: 225 HSEFYRLTKEAAAELSEVKAAGKRIIAVGTTSIRTLETIASRNNGALVEESGWTDIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
G+ F+AVD L++NFHLPKSTL+MLVSA + Y+HA+ + YRF+S+GD
Sbjct: 285 GFTFQAVDALITNFHLPKSTLIMLVSALSNRDIILHAYRHAVENRYRFFSFGD 337
>gi|225868906|ref|YP_002744854.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus equi subsp. zooepidemicus]
gi|225702182|emb|CAW99893.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus equi subsp. zooepidemicus]
Length = 342
Score = 272 bits (695), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 154/355 (43%), Positives = 210/355 (59%), Gaps = 19/355 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
M +FDF+LP IA P+ RD ++L+++ H + DH++ L DA+
Sbjct: 1 MNTNDFDFELPEELIAQTPLEQRDRSKLLIIDHQEHTMTDSHFDHIIDQL----EPGDAL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V NNT+V+ A+L G + + L + + W V A+P+K +K G + F
Sbjct: 57 VMNNTRVLPARLYGEKM----ETHGHVELLLLKNIQGDQWEVLAKPAKRLKAGAQISF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G L+A VI + G ++ FS GI LE + +G +PLPPYI K R
Sbjct: 111 --GDGLLKARVIQELEHGGRIVEFSYDGIFLEI-LETLGEMPLPPYIHEKLADAER---- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT LL ++ + G+ + ++TLHVG GTF PV V++ D+H
Sbjct: 164 YQTVYAKENGSAAAPTAGLHFTQELLQKIEAKGVHLVYLTLHVGLGTFRPVSVDNIDEHD 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MHSE + AQ L VK+ GGRIV+VGTTS+R LET ++ G I SG+TNIFI
Sbjct: 224 MHSEFYLLSEEAAQTLRKVKAAGGRIVAVGTTSIRTLETIGSKFQGQILADSGWTNIFIK 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
PGY+F+ VD +NFHLPKSTL+MLVSAF G + + Y+HAI YRF+S+GD
Sbjct: 284 PGYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYKHAIDEHYRFFSFGDA 338
>gi|113869066|ref|YP_727555.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ralstonia
eutropha H16]
gi|123133638|sp|Q0K734|QUEA_RALEH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|113527842|emb|CAJ94187.1| queuosine biosynthesis protein [Ralstonia eutropha H16]
Length = 352
Score = 271 bits (694), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 161/366 (43%), Positives = 218/366 (59%), Gaps = 25/366 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVH----PNLSCPLVISDHLVSDLPAFLNSN 56
+ + +FDF LPP IA + R ++RL+VV + + + + D SD+ +L +
Sbjct: 2 LTLSDFDFPLPPELIAQSALPDRSASRLLVVERLAPADTADAVRMVDRAFSDIVDYLRPD 61
Query: 57 DAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
D +VFN+T+VI A RF +I + V ++ R SK +G ILH
Sbjct: 62 DLLVFNDTRVIKA-----RFFGHKPSGGKIEVLVERVVDSHTVLAQVRASKTPTEGSILH 116
Query: 117 FFSQDGQSRLEATV---IDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
DG TV +D++ T L F ++L I G +PLPPYI R P D
Sbjct: 117 L--ADGA--FAVTVGPRVDQFFT----LRFPEPALDL---IERYGRLPLPPYI-RHDP-D 163
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
A D YQT YA+ G+VAAPTAGLHF L +RL + G++ F+TLHVGAGTF PV+ E
Sbjct: 164 AYDETRYQTVYARSPGAVAAPTAGLHFDDALFARLNAAGVRRAFLTLHVGAGTFQPVRTE 223
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
+ +H MHSE + A AQA+ ++RGGR+++VGTTSLR LE+A DG + SG T
Sbjct: 224 NLAEHKMHSEWYAVSADLAQAVRDTRARGGRVIAVGTTSLRALESAAQADGTLAAGSGDT 283
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFITPGYRFR VD L++NFHLPKSTLLMLVSA G+E + Y+HA+ YRF+SYGD
Sbjct: 284 DIFITPGYRFRLVDALITNFHLPKSTLLMLVSALAGVEAIRAAYRHAVEQRYRFFSYGDA 343
Query: 354 SLLFQK 359
LL ++
Sbjct: 344 MLLTRQ 349
>gi|91205719|ref|YP_538074.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
bellii RML369-C]
gi|122425478|sp|Q1RI29|QUEA_RICBR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|91069263|gb|ABE04985.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
bellii RML369-C]
Length = 353
Score = 271 bits (694), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 151/375 (40%), Positives = 224/375 (59%), Gaps = 39/375 (10%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA P+ RD + L++ S + ++ +L D +V
Sbjct: 1 MKLSDFDFDLPLELIAQNPISKRDESNLLIA----STQQYVKTKFY-NIIDYLKEGDLLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS---------------WSVYARP 105
FNN+KVI A+L+ +K I+ L+ R+ N WS +A+P
Sbjct: 56 FNNSKVIKAKLS---------LDKNITINLNQRLKDNRRATNDDAGRLKSIDYWSAFAKP 106
Query: 106 SKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPY 165
++ +K GD +F + + + +K GEI + F ++ I + + G +PLP Y
Sbjct: 107 ARKLKVGDEFYFDNH------KIIITEKLEMGEIKIKFELANISVFEFLDKYGEMPLPLY 160
Query: 166 IARKRPIDAR-DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
I KRP + D YQT Y+ IQGSVAAPTAGLHFT++++++L + G++V FVTLHVGA
Sbjct: 161 I--KRPERQKSDDERYQTVYSNIQGSVAAPTAGLHFTNDIINKLKAKGVQVAFVTLHVGA 218
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDG 284
GTFMPVK E+ ++H MH+E I TA +N K RI++VGTTSLR LE++ +G
Sbjct: 219 GTFMPVKTENINEHKMHTEYCSITPETAAIINKAKKEKRRIIAVGTTSLRTLESSGI-NG 277
Query: 285 IINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHA 344
+N T+IFITPG++F+ VD+L++NFH PKSTL MLV AF G ++ ++Y++AI
Sbjct: 278 NVNSGDFETDIFITPGFKFQIVDMLLTNFHFPKSTLFMLVCAFAGFKKMHELYKYAIEEQ 337
Query: 345 YRFYSYGDTSLLFQK 359
RF+SYGD +LL++K
Sbjct: 338 MRFFSYGDATLLYRK 352
>gi|261381310|ref|ZP_05985883.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
subflava NJ9703]
gi|284795799|gb|EFC51146.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
subflava NJ9703]
Length = 342
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 155/357 (43%), Positives = 211/357 (59%), Gaps = 20/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF+LP IA P R S+RL+V P L I D DLP ++ D +V
Sbjct: 1 MDISDFDFELPEKLIAQHPPEVRGSSRLLVALPTLP----IEDKHFGDLPDYVAPGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + +I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKASG-----GKIEALIERVLDAHTALAHIRSSKSPKPGTELIF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ + A ++++ E L G + + + G +PLPPYI +R D D
Sbjct: 109 --EGDIRAVMMER---AEELFCLKFEGEQTVYELLEQNGHLPLPPYI--ERVADDEDDSR 161
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK QG+VAAPTAGLHFT LL RL + G++ VTLHVGAGTF PV+V+ ++H
Sbjct: 162 YQTVYAKYQGAVAAPTAGLHFTDELLGRLKAKGVETAEVTLHVGAGTFQPVRVDKIEEHK 221
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE + A T A+ + K+RG ++ +VGTTS+R LE+A E G + G T+IFITP
Sbjct: 222 MHSEWFDVPAETVAAIEAAKARGNKVWAVGTTSMRALESAARETGRLKAGRGDTDIFITP 281
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GYRF D L++NFHLPKSTLLMLVSAF G+E + +Y+HA+ YRF+SYGD +L
Sbjct: 282 GYRFNVADRLITNFHLPKSTLLMLVSAFSGMEHIRSVYRHAVEQEYRFFSYGDAMIL 338
>gi|153955757|ref|YP_001396522.1| hypothetical protein CKL_3143 [Clostridium kluyveri DSM 555]
gi|219856124|ref|YP_002473246.1| hypothetical protein CKR_2781 [Clostridium kluyveri NBRC 12016]
gi|189038515|sp|A5N205|QUEA_CLOK5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|254764273|sp|B9E5Q7|QUEA_CLOK1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|146348615|gb|EDK35151.1| QueA [Clostridium kluyveri DSM 555]
gi|219569848|dbj|BAH07832.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 341
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 150/356 (42%), Positives = 209/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDF LP IA +P+ RD RLMV+ + + D+ +LN D +V
Sbjct: 1 MEVTDFDFYLPEELIAQKPLEQRDEGRLMVLDKKTGK---VCHKIFKDIVYYLNPGDCVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L GVR + + I L R +W +P + K G+ +F
Sbjct: 58 LNDTRVLPARLIGVREDTMGK----IEFLLLKRRDNFTWETLVKPGRRAKVGNRFNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L+A V+ G ++ F +G+ E + +G IPLPPYI K ++ ++ Y
Sbjct: 111 -GSGQLKAEVVSINEDGNRIVRFEYNGV-FEEILDKLGQIPLPPYIKEK--LENKEL--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL L G+ + F+TLHVG GTF PVKVE+ +DH M
Sbjct: 165 QTVYSKEEGSAAAPTAGLHFTEELLRELREKGVNLAFLTLHVGLGTFRPVKVENIEDHAM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA +N+ K G ++SVGTTS R LET E+G + SG+T+IFI PG
Sbjct: 225 HSEFYSMSKETADMINAAKESGHSVISVGTTSCRTLETIGDENGRVKEQSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+++ VD L++NFHLPKSTL+MLVSAF G E T Y A+ YRF+S+GD +
Sbjct: 285 YKYKVVDKLITNFHLPKSTLIMLVSAFYGRENTLHAYNVAVKEKYRFFSFGDAMFI 340
>gi|28378877|ref|NP_785769.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus plantarum WCFS1]
gi|254557082|ref|YP_003063499.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus plantarum JDM1]
gi|300768017|ref|ZP_07077923.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Lactobacillus plantarum subsp. plantarum ATCC 14917]
gi|308181076|ref|YP_003925204.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus plantarum subsp. plantarum ST-III]
gi|38258031|sp|Q88V04|QUEA_LACPL RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|28271714|emb|CAD64620.1| S-adenosylmethionine tRNA ribosyltransferase-isomerase
[Lactobacillus plantarum WCFS1]
gi|254046009|gb|ACT62802.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus plantarum JDM1]
gi|300494366|gb|EFK29528.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Lactobacillus plantarum subsp. plantarum ATCC 14917]
gi|308046567|gb|ADN99110.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus plantarum subsp. plantarum ST-III]
Length = 344
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 155/357 (43%), Positives = 213/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +++FD+DLP IA P+ RDS+RL+ + + D D+ LN DA+V
Sbjct: 3 LTLEDFDYDLPHELIAQTPIKKRDSSRLLELDRQTGE---MQDKHFYDIIDQLNPGDAVV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN++V+ A+L GV+ E L + W +P+K K G ++ F
Sbjct: 60 MNNSRVMPARLYGVKPETGGHAE----VLLLHNTEGDEWETLMKPAKRAKVGTVISF--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L ATV + G ++ F GI +E SL G PLPPYI K +D D Y
Sbjct: 113 -GDGKLTATVTAEKEDGIRMIEFHYDGIFMEILESL-GETPLPPYIKEK--LDDPDR--Y 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLH+T LL ++ GIK+ ++TLHVG GTF PV+ ++ DDH M
Sbjct: 167 QTVYAKENGSAAAPTAGLHWTKELLQKVQDKGIKLVYLTLHVGLGTFRPVEEDNIDDHKM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE +D A+ LN V+ GGRI++ GTTS+R LET ++ DG I P SG+T+IFI P
Sbjct: 227 HSEFYRLDEDAAKTLNEVRQNGGRIIATGTTSIRTLETIGSKFDGEIKPDSGWTDIFIKP 286
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+++ VD ++NFHLPKSTL+MLV+AF G + K YQHAI YRF+S+GD +
Sbjct: 287 GYQWKVVDAFITNFHLPKSTLVMLVAAFTGRDMILKAYQHAIDEKYRFFSFGDAMFI 343
>gi|197121715|ref|YP_002133666.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Anaeromyxobacter sp. K]
gi|238689888|sp|B4UID2|QUEA_ANASK RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|196171564|gb|ACG72537.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Anaeromyxobacter sp. K]
Length = 345
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 154/359 (42%), Positives = 209/359 (58%), Gaps = 14/359 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP +A PV PRD++RLMV+ P P + +DLP L D +V
Sbjct: 1 MRLSDFDFALPEGLVAQAPVTPRDASRLMVLAPGEGAP---AHRGFADLPELLAPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + C W + SK I++G +L F
Sbjct: 58 FNDTRVIPARLLGHKAS--GGKVELLLCEPLEGGLGRRWRAMGQASKPIREGAVLTF--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DG LEA V G + G ELE + G IPLPPYI +R DA D Y
Sbjct: 113 DG---LEARVDGVEGEGFYRVTLDRQGPELEAALGRAGRIPLPPYI--RRAPDAEDAARY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ GS AAPTAGLHFT LL+RL + GI+ VTLHVG GTF+P++ +D D H M
Sbjct: 168 QTIWARAPGSAAAPTAGLHFTEPLLARLAARGIRRTAVTLHVGPGTFLPIRGDDLDLHRM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A+ L + ++RGGRIV+VGTTS+R LE+A DG + G T +FI PG
Sbjct: 228 HGERYEVSPAAAEELAATRARGGRIVAVGTTSVRTLESA-WRDGAVAAGPGRTELFIRPG 286
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
+ F AVD +++NFHLP+STLL+LV AF G Y+ A++ YRF+SYGD L+ ++
Sbjct: 287 HPFHAVDAMVTNFHLPRSTLLVLVCAFGGQGRVLAAYREAVARGYRFFSYGDAMLVLRR 345
>gi|209527446|ref|ZP_03275951.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Arthrospira
maxima CS-328]
gi|209492119|gb|EDZ92469.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Arthrospira
maxima CS-328]
Length = 375
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 158/368 (42%), Positives = 205/368 (55%), Gaps = 26/368 (7%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D++LPP RIA PV PRDS+RL+VV P L DLP L D ++ N
Sbjct: 15 LQGYDYELPPDRIAQNPVIPRDSSRLLVV----DSPPSHQHRLFRDLPDLLQPEDLLILN 70
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NT+V+ A+L G + I L +PN W +P K K GD L F S+ G
Sbjct: 71 NTRVLPARLYGRKST-----SAAIEILLLQEQAPNCWLALVKPGKRFKIGDRLEFPSKSG 125
Query: 123 QSRLEATVID-KWNTGEILLVFSI-SGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ L ATVID TG LL F + G L + G IP PPY+ + + + Y
Sbjct: 126 REILYATVIDTNPGTGGRLLKFEVPQGQSLVSILDQFGEIPFPPYVTDSQAVAEQ----Y 181
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y G+VAAPTAGLHFT L RL I F+TLHVG GTF PV+VED H M
Sbjct: 182 QTIYGTRPGAVAAPTAGLHFTEELFQRLSDHHIDHAFLTLHVGLGTFRPVEVEDITTHQM 241
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE----TATTEDGIINPWSGFTNIF 296
H+E + T +N ++RGGRI++VGTT +R LE + DG I P+ G N+F
Sbjct: 242 HAEWVELRPETVDKINQTRARGGRIIAVGTTVVRTLEGIAAAQNSLDGCIQPYCGEINLF 301
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHA-------YRFYS 349
I PGYR+R +D L++NFHLP+S+LLMLVSA G E K+YQ A+ YRFYS
Sbjct: 302 IYPGYRWRVIDGLITNFHLPRSSLLMLVSALIGRERLMKLYQDALEQPPNDFGNRYRFYS 361
Query: 350 YGDTSLLF 357
+GD L+
Sbjct: 362 FGDAMLIL 369
>gi|188586408|ref|YP_001917953.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Natranaerobius thermophilus JW/NM-WN-LF]
gi|229892797|sp|B2A5L1|QUEA_NATTJ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|179351095|gb|ACB85365.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Natranaerobius thermophilus JW/NM-WN-LF]
Length = 343
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 149/356 (41%), Positives = 208/356 (58%), Gaps = 15/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EF+++LP IA +P+ R +RLMVV N S V +H LP ++ D V
Sbjct: 1 MKLEEFNYELPEELIAQKPLANRSKSRLMVVSINSSD--VQHNHF-EKLPQYVKDGDLFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN++VI A+L G + + E LH + W V +P K K G++ F
Sbjct: 58 INNSRVIPARLFGNKKQTGGKLE---MVLLHPLEGKDEWEVLVKPGKRAKPGNVFEF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
GQ LEA ++D G + F G ++ + +G +PLPPYI + D Y
Sbjct: 112 -GQETLEAEILDITPEGSRRVKFYYQG-NFQQVLDQLGQMPLPPYIKE----ELEDPERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GSVAAPTAGLHFT ++S + G +V +TLHVG GTF PV+ + ++H M
Sbjct: 166 QTVYAKESGSVAAPTAGLHFTPEIISDIKDQGGEVAELTLHVGLGTFRPVETPNIEEHEM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + TA+ +N K RG R+++VGTT +R LET T+DG++ P G+T+IFI PG
Sbjct: 226 HAEYYQLPEETAKKINQAKQRGNRVIAVGTTVVRTLETVKTDDGLVQPGKGWTDIFIYPG 285
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+ VD +++NFHLPKSTLLMLVSAF G + YQ AI YRF+S+GD +
Sbjct: 286 YEFKVVDAMLTNFHLPKSTLLMLVSAFAGKDLIMSAYQAAIEERYRFFSFGDAMFI 341
>gi|194017396|ref|ZP_03056008.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
pumilus ATCC 7061]
gi|194011264|gb|EDW20834.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
pumilus ATCC 7061]
Length = 342
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 151/357 (42%), Positives = 211/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++ FDFDLP IA P+ RD++RLMV++ I S + + + D +V
Sbjct: 1 MKLELFDFDLPERLIAQVPLEKRDASRLMVLNKQTGA---IKHDTFSQITDYFQTGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ ++ L + + W +P+K +KKG ++ F
Sbjct: 58 LNNTRVLPARLFGMK----EDTGAKVELLLLKQEEGDKWETLVKPAKRVKKGTVITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A ++ G + F +GI E SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLQAVCTEELEHGGRKVEFQYTGIFYEVLESL-GEMPLPPYI--KEQLDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT+ LL L G+ + F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYSKEVGSAAAPTAGLHFTNELLDALKEKGVHIAFITLHVGLGTFRPVSADRIEEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E ++ TA LN V+ GGRI+SVGTTS R LET A+ DG SG+T+IFI P
Sbjct: 225 HAEFYEMNEETAAELNRVRKEGGRIISVGTTSTRTLETIASAHDGEFKASSGWTSIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D +++NFHLPKS+L+MLVSA G E K Y A+ YRF+S+GD L+
Sbjct: 285 GYTFKAIDGMITNFHLPKSSLIMLVSALAGREHVLKAYNEAVKEEYRFFSFGDAMLI 341
>gi|23099489|ref|NP_692955.1| S-adenosylmethionine-tRNA ribosyltransferase-isomerase
[Oceanobacillus iheyensis HTE831]
gi|38372491|sp|Q8EPQ8|QUEA_OCEIH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|22777718|dbj|BAC13990.1| S-adenosylmethionine-tRNA ribosyltransferase-isomerase
[Oceanobacillus iheyensis HTE831]
Length = 342
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 212/358 (59%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++FDF LP IA P+ R S+RL V+ S I+ D+ +L + D +V
Sbjct: 1 MQIEDFDFHLPEELIAQTPLKDRTSSRLCVLDKQTS---EITHRSFKDITTYLQAGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L GV+ + +I L + ++W V +P+K +K G + F
Sbjct: 58 LNDTKVLPARLYGVK----SDTGAKIEVLLLHQQEEDTWEVLVKPAKKVKVGTEIIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L+AT ID + G ++ FS +GI E + +G +PLPPYI + P R Y
Sbjct: 111 -GNGKLKATCIDLKDHGGRIMTFSYTGIFYE-ILDQLGEMPLPPYIKEQLPEQDR----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL + ++G+ + FVTLHVG GTF PV V+ +DH M
Sbjct: 165 QTVYAKEKGSAAAPTAGLHFTDKLLEDIKAMGVNIVFVTLHVGLGTFRPVSVDSVEDHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A+ LN K+ G RI+SVGTTS R LET + DG G+T+IFI P
Sbjct: 225 HSEFYSMSESAAKTLNEAKAAGRRIISVGTTSTRTLETIVRDHDGKFVATRGWTDIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+FRA+D L++NFHLPKSTL+M++SA G E Y A+ YRF+S+GD L+
Sbjct: 285 PYKFRAIDGLITNFHLPKSTLIMMISALAGKEAILHAYNEAVKEEYRFFSFGDAMLIL 342
>gi|220932067|ref|YP_002508975.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Halothermothrix orenii H 168]
gi|254764280|sp|B8CXG1|QUEA_HALOH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|219993377|gb|ACL69980.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Halothermothrix orenii H 168]
Length = 341
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 147/357 (41%), Positives = 208/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V+EFD++LP IA +P+ RD +RLMV+H I + + ++ FL D +V
Sbjct: 1 MKVEEFDYELPEELIAQKPLPNRDDSRLMVLHRKTGE---IEETVFKNIIKFLEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + R I L ++ W V RP + +KKG+ + F
Sbjct: 58 LNDTKVIPARLFGEKIPSGTR----IEVLLLKSITEGLWEVLVRPGRRMKKGNRVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L V D + G ++ F G + ++ I +G +PLPPYI RK D Y
Sbjct: 111 -GDGKLVGIVKDYTDFGGRIMQFEYDG-DFDKVIEELGEMPLPPYITRK----VEDKGRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +GSVAAPTAGLHFT LL ++ GI + ++TLHVG GTF PV+ E+ +DH M
Sbjct: 165 QTVYARKKGSVAAPTAGLHFTDRLLKKIKEQGIGIIYLTLHVGLGTFRPVRAENVEDHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + K +G ++++VGTT R LE+A E + G+T+IFI PG
Sbjct: 225 HSEYFEVSTDVVNRIKETKEKGKKVIAVGTTVTRALESAAVEKRHLKAMRGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+ +D L++NFHLPKSTLLMLVSAF G + Y+ AI + YRF+S+GD L+
Sbjct: 285 YNFKVIDGLITNFHLPKSTLLMLVSAFAGKDMVMSAYKLAIKNKYRFFSFGDAMLIL 341
>gi|260583655|ref|ZP_05851403.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Granulicatella elegans ATCC 700633]
gi|260158281|gb|EEW93349.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Granulicatella elegans ATCC 700633]
Length = 345
Score = 271 bits (692), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 155/361 (42%), Positives = 214/361 (59%), Gaps = 27/361 (7%)
Query: 4 KEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNN 63
++FDFDLP +IA P+ R S+RL+VV+ + D S++ +L D +V NN
Sbjct: 6 QDFDFDLPEEQIAQTPLKDRTSSRLLVVNETEHS---VEDKHFSEIIDYLEEGDILVVNN 62
Query: 64 TKVITAQLNGVRFCHINRREKE-----ISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
T+V+ A+L G EKE I L + W +P+K +K G ++ F
Sbjct: 63 TRVLPARLYG---------EKEGTGAHIEVLLLHNTHGDCWETLVKPAKRMKVGTVVSF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
G RL+ATV ++ G ++ F G+ LE SL G +PLPPYI K +D D
Sbjct: 113 ---GDGRLKATVTEELEQGGRIIEFQYDGVFLEILESL-GEMPLPPYI--KERLD--DQE 164
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YAK GS AAPTAGLHFT L+ ++ GI++ +TLHVG GTF PV V+ +DH
Sbjct: 165 RYQTVYAKENGSAAAPTAGLHFTKELMEKIQQKGIQIVPITLHVGLGTFRPVSVDHLEDH 224
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFI 297
MHSE I TA+ + K G R+++VGTTS+R LET + G I P SG+T+IFI
Sbjct: 225 KMHSEYYHISKETAEVIAETKKNGKRVIAVGTTSIRTLETVGSANQGEIVPSSGWTDIFI 284
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+PGY F+ VD ++NFHLPKSTL+MLVSA+ G + T + Y HAI YRF+S+GD ++
Sbjct: 285 SPGYEFKVVDAFITNFHLPKSTLVMLVSAYLGRDFTLEAYHHAIRERYRFFSFGDAMFVY 344
Query: 358 Q 358
+
Sbjct: 345 R 345
>gi|306821137|ref|ZP_07454753.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Eubacterium
yurii subsp. margaretiae ATCC 43715]
gi|304550830|gb|EFM38805.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Eubacterium
yurii subsp. margaretiae ATCC 43715]
Length = 344
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 144/356 (40%), Positives = 215/356 (60%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +EF +DLP IA P+ R S++L++++ + ++ +L+ ND +V
Sbjct: 1 MKTEEFFYDLPERLIAQTPLKDRSSSKLLLLNKESGN---TKHEIFKNIIDYLDKNDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+V+ A+L G++ + L R S W V +P+K +KKG + F
Sbjct: 58 FNNTRVLPARLYGLK----KDTGANVEILLLKRYSMKKWQVLVKPAKRLKKGSTVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L T++++++ G + FS G+ E IS +G +PLPPYI K +D Y
Sbjct: 111 -GEDLLLMTILEEYDEGIRDVEFSYEGV-FEDIISQIGFMPLPPYIKEK----LQDKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+KI GS AAPTAGLHFT L++ L G+++ ++TLHVG GTF PVK E+ DH+M
Sbjct: 165 QTIYSKINGSSAAPTAGLHFTKELIASLEEKGVQIEYLTLHVGLGTFRPVKAEEVTDHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ID TAQ LN K G +I++VGTT++R LE+A D I+ T+IFI P
Sbjct: 225 HSEHYVIDEDTAQRLNKAKKEGKKIIAVGTTTVRTLESAVNRDNILEKLEDDTSIFIYPP 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+ VD +++NFHLP+STL+M++SAF G ++ Y+ AI + YRF+S+GD+ +
Sbjct: 285 YDFKFVDSIITNFHLPQSTLIMMISAFAGKDKVFNAYKVAIENEYRFFSFGDSMFI 340
>gi|298244051|ref|ZP_06967858.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Ktedonobacter racemifer DSM 44963]
gi|297557105|gb|EFH90969.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Ktedonobacter racemifer DSM 44963]
Length = 379
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 150/371 (40%), Positives = 221/371 (59%), Gaps = 22/371 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FD+ LP IA P+ PRDS+RL+VV ++ D+ +L D ++
Sbjct: 17 LKISDFDYHLPNELIAQTPIEPRDSSRLLVVKRQDET---LAHQHFRDIEEYLQPGDLLI 73
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N ++VI A+L G R E + + ++W RP + +++G + F ++
Sbjct: 74 ANQSRVIPARLLGKRAESGGAVEV-LLLAERSDLGQDTWEALVRPGRRLREGARIFFGAE 132
Query: 121 -DGQSRLEATVIDKWNTGEILLVFSISGIELERQ------------ISLVGTIPLPPYIA 167
+ Q+RL ++++ G ++ F + G ERQ I +G +PLPPYI
Sbjct: 133 TEEQARLIGEILERTEAGGRVVRFHVPGRSQERQNDPYALLDVRQVIDEIGKMPLPPYI- 191
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
+D D YQT YA+I+GS AAPTAGLHFT LL RL + G++ FVTLHVG TF
Sbjct: 192 -HETLD--DPERYQTVYARIRGSAAAPTAGLHFTPQLLERLRARGVRTGFVTLHVGLDTF 248
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGII 286
PV+ ED +H MHSE +D TA +N ++RGGR+V+VGTTS+R+LE+ A+ +G I
Sbjct: 249 RPVESEDVREHKMHSEEIELDETTAALINETRARGGRVVAVGTTSVRVLESVASLHEGRI 308
Query: 287 NPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYR 346
P+ G T +FITPGYR++AVD L++NFHLP+STLL+LVSAF ++ YQ AI+ YR
Sbjct: 309 VPYKGHTRLFITPGYRYQAVDALITNFHLPRSTLLLLVSAFMTKPLMERAYQEAITERYR 368
Query: 347 FYSYGDTSLLF 357
F+S+GD L+
Sbjct: 369 FFSFGDAMLIL 379
>gi|315221824|ref|ZP_07863736.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus anginosus F0211]
gi|315189057|gb|EFU22760.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus anginosus F0211]
Length = 342
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 156/353 (44%), Positives = 211/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD++RL+VV+ + D + LN DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASRLLVVNHETGQ---MEDTHFDAIIDQLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G + + L ++ + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLHGEK----PETGGHVELLLLKNIAGDDWEVLAKPAKRLKVGAAISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+++ G + F GI LE SL G +PLPPYI K +D Y
Sbjct: 111 -GDGRLTATVLEELEHGGRTVRFHYQGIFLEVLESL-GEMPLPPYIHEK----LKDRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+++ + G+K+ ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTKELLAQIEAKGVKLVYLTLHVGLGTFRPVSVDNVDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L VK+ G R+V+VGTTS+R LET ++ +G I SG+TNIFI P
Sbjct: 225 HSEFYTLSEEAANTLRQVKASGHRVVAVGTTSIRTLETIGSKFNGEIKADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY ++ VD +NFHLPKSTL+MLVSAF G E YQHAI YRF+S+GD
Sbjct: 285 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLSAYQHAIDEKYRFFSFGD 337
>gi|255066143|ref|ZP_05317998.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
sicca ATCC 29256]
gi|255049688|gb|EET45152.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
sicca ATCC 29256]
Length = 343
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 155/361 (42%), Positives = 215/361 (59%), Gaps = 28/361 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P++ + D + DLP ++ + D +V
Sbjct: 1 MDISDFDFTLPDQLIAQHPPEVRGSSRLLVALPDMP----LQDRVFGDLPDYIEAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKE----ISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
FNNTKV+ A+L G EKE I + + ++ + R SK K G L
Sbjct: 57 FNNTKVMKARLFG---------EKESGGKIEALIERVLDNHTALAHIRSSKSPKPGTKLI 107
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDAR 175
F + + A ++++ + L G + + + G +PLPPYI +R A
Sbjct: 108 F-----EGDICAVMVERADE---LFCLRFEGEQTVYELLEQNGHLPLPPYI--ERAAGAD 157
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT YAK QG+VAAPTAGLHFT LL RL + G++ VTLHVGAGTF PV+V+
Sbjct: 158 DDTRYQTVYAKHQGAVAAPTAGLHFTDELLGRLKAKGVETAEVTLHVGAGTFQPVRVDKI 217
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
++H MHSE + T A+ + +RG ++ +VGTTS+R LE+A E G + G T+I
Sbjct: 218 EEHKMHSEWFDVPPETVAAIEAAHARGNKVWAVGTTSMRALESAARETGRLKAGQGDTDI 277
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFR +D L++NFHLPKSTLLMLVSAF G+E + +Y+HA+ H YRF+SYGD +
Sbjct: 278 FITPGYRFRVIDRLITNFHLPKSTLLMLVSAFSGMEHIRAVYRHAVEHEYRFFSYGDAMV 337
Query: 356 L 356
L
Sbjct: 338 L 338
>gi|255656788|ref|ZP_05402197.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile QCD-23m63]
gi|296452383|ref|ZP_06894084.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile NAP08]
gi|296877731|ref|ZP_06901758.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile NAP07]
gi|296258713|gb|EFH05607.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile NAP08]
gi|296431264|gb|EFH17084.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile NAP07]
Length = 341
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 147/356 (41%), Positives = 201/356 (56%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F FDLP IA P+ R S+RLMV+ I + D+ +LN D +V
Sbjct: 1 MKTSDFKFDLPQELIAQVPIEDRASSRLMVLDKETGN---IEHKVFRDIIEYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G + +I L R ++W +P K K G F
Sbjct: 58 LNNTRVIPARLMGEKL----ETGGKIEFLLLKRTEEDTWQALVKPGKRAKVGTKFSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L V+D + G ++ F GI E + +G +PLPPYI + +D ++ Y
Sbjct: 111 -GNGKLIGEVVDLSDEGSRIIKFHYDGI-FEEILDELGNMPLPPYITAR--LDEKER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT LLS++ G+ + FVTLHVG GTF PVKVED +H M
Sbjct: 165 QTVYSKHNGSAAAPTAGLHFTEELLSKIKEKGVDIAFVTLHVGLGTFRPVKVEDVLNHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +N K G ++ VGTTS R +E+A EDG + SG+T IFI PG
Sbjct: 225 HSEYYMVSQEAADKINRAKENGNNVICVGTTSCRTIESACNEDGKMKETSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA CG + Y A+ YRF+S+GD ++
Sbjct: 285 YKFKVLDKLITNFHLPESTLIMLVSAICGKDNVLNAYNEAVKERYRFFSFGDAMII 340
>gi|212638559|ref|YP_002315079.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Anoxybacillus flavithermus WK1]
gi|212560039|gb|ACJ33094.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Anoxybacillus flavithermus WK1]
Length = 345
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 154/357 (43%), Positives = 210/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ RD++RLMV+ + V + + ++L D +V
Sbjct: 3 MKIDLFDFYLPEELIAQTPLPNRDASRLMVL--DKQTGEVTHESTFRSILSYLKEGDCLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + I L ++ + W +P+K +K G I+ F
Sbjct: 61 LNDTRVLPARLYGEK----EETGAHIEVLLLKQLDGDQWETLVKPAKRVKVGTIISF--- 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A + + G +L FS GI LE SL G +PLPPYI + D Y
Sbjct: 114 -GDGRLRAECVAELEHGGRILSFSYDGIFLEVLESL-GEMPLPPYIKAQ----LHDRERY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GS AAPTAGLHFT LL + G+ + F+TLHVG GTF PV VE+ ++H M
Sbjct: 168 QTVYAREAGSAAAPTAGLHFTEQLLEDVRKKGVHLAFITLHVGLGTFRPVNVENIEEHDM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TAQ LN VK++GGRI++VGTTS R LET A+ DG SG+T+IFI P
Sbjct: 228 HAEFYQMSEQTAQLLNDVKAQGGRIIAVGTTSTRTLETIASRHDGTFVAESGWTDIFIYP 287
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY FRA+D +++NFHLPKSTL+MLVSA G E + Y+ A+ YRF+S+GD L+
Sbjct: 288 GYTFRAIDGIITNFHLPKSTLIMLVSALAGREHVLRAYEEAVKERYRFFSFGDAMLI 344
>gi|94311875|ref|YP_585085.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cupriavidus
metallidurans CH34]
gi|166216742|sp|Q1LJ60|QUEA_RALME RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|93355727|gb|ABF09816.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cupriavidus
metallidurans CH34]
Length = 353
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 157/363 (43%), Positives = 213/363 (58%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVH----PNLSCPLVISDHLVSDLPAFLNSN 56
+ + +FDF LPP IA + R ++RL+VV + S + + D SD+ +LN +
Sbjct: 2 LTLSDFDFPLPPELIAQSALPDRSASRLLVVERTAPEDTSEAVRLVDRAFSDILEYLNPD 61
Query: 57 DAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
D +VFN+T+VI A RF I + V ++ R SK +G +LH
Sbjct: 62 DLLVFNDTRVIKA-----RFFGHKPSGGRIEVLVERVVDTHTVLAQVRASKTPVEGSLLH 116
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
+ D + +D++ T L F ++L I G +PLPPYI DA D
Sbjct: 117 L-ADDAFAVTVGPRVDQFFT----LRFPEPALDL---IERYGRLPLPPYITHD--PDAYD 166
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YA+ G+VAAPTAGLHF L +RL + GI+ F+TLHVGAGTF PV+ E+
Sbjct: 167 ETRYQTVYARNPGAVAAPTAGLHFDDALFARLDAAGIRRAFLTLHVGAGTFQPVRTENLS 226
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+H MHSE I A A+ ++RGGR+++VGTTSLR LE+A EDG + SG T+IF
Sbjct: 227 EHKMHSEWYAISPELADAVRETRARGGRVIAVGTTSLRALESAAAEDGTLEAGSGDTDIF 286
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGY FR VD L++NFHLPKSTLLMLVSA G+E + Y+HA+ YRF+SYGD LL
Sbjct: 287 ITPGYAFRIVDALITNFHLPKSTLLMLVSALAGVEAIRDAYRHAVDARYRFFSYGDAMLL 346
Query: 357 FQK 359
++
Sbjct: 347 TRR 349
>gi|153816035|ref|ZP_01968703.1| hypothetical protein RUMTOR_02281 [Ruminococcus torques ATCC 27756]
gi|317500973|ref|ZP_07959183.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lachnospiraceae bacterium 8_1_57FAA]
gi|331089128|ref|ZP_08338031.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lachnospiraceae bacterium 3_1_46FAA]
gi|145846682|gb|EDK23600.1| hypothetical protein RUMTOR_02281 [Ruminococcus torques ATCC 27756]
gi|316897676|gb|EFV19737.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lachnospiraceae bacterium 8_1_57FAA]
gi|330405905|gb|EGG85431.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lachnospiraceae bacterium 3_1_46FAA]
Length = 341
Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 148/357 (41%), Positives = 203/357 (56%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R S+RLM V I H+ S++ +LN D +V
Sbjct: 1 MKTSDFYYDLPEELIAQDPLEDRSSSRLMTVDKETG---KIGHHVFSEIIDYLNEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + +I L R + + W +P + K G + F
Sbjct: 58 INDTKVIPARLIGAK----EETGAKIEVLLLKRGADDVWETLVKPGRKAKPGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L V+D + G L+ F GI E + +G +PLPPYI + +D Y
Sbjct: 111 -GDGLLVGEVVDIVDEGNRLIHFEYEGI-FEEILDQLGQMPLPPYITHQ----LQDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
T YA+ GS AAPTAGLHFT LL ++ G+ + VTLHVG GTF PVKV+D ++H M
Sbjct: 165 NTVYAEHSGSAAAPTAGLHFTPELLRKIEEKGVDIARVTLHVGLGTFRPVKVDDVENHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I+ A+ +N K RGGR++ VGTTS R +E+A E+G + SG+T IFI PG
Sbjct: 225 HSEFYMINEEAAEKINHAKDRGGRVICVGTTSCRTIESAADENGRLKACSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YRF+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD L+
Sbjct: 285 YRFKTLDCLITNFHLPESTLIMLVSALAGKEHVMAAYEEAVKERYRFFSFGDAMLIL 341
>gi|153810635|ref|ZP_01963303.1| hypothetical protein RUMOBE_01019 [Ruminococcus obeum ATCC 29174]
gi|149833031|gb|EDM88113.1| hypothetical protein RUMOBE_01019 [Ruminococcus obeum ATCC 29174]
Length = 341
Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 152/356 (42%), Positives = 205/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R S+RL+ H ++ H +D+ +L+ D +V
Sbjct: 1 MKTSDFYYDLPKELIAQDPLEDRSSSRLL--HLSMQDGSFEHRHF-TDILDYLHKGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G H I L R + W +P K + G + F
Sbjct: 58 INDTKVIPARLYG----HKEETGAVIEILLLKRRENDIWECLVKPGKKARPGAKITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+ +ID + G L+ F GI E + +G +PLPPYI K +D Y
Sbjct: 111 -GDGILKGEIIDVVDEGNRLIQFHYDGI-FEEILDQLGEMPLPPYITHK----LKDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ +G+K+ VTLHVG GTF PVKV+D + H M
Sbjct: 165 QTVYAKNDGSAAAPTAGLHFTRELLKQVEDMGVKIAHVTLHVGLGTFRPVKVDDVEQHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +N K GGR++SVGTTS R LE+AT E+GI+ SG+T IFI PG
Sbjct: 225 HSEFYMVEEDQAKLINDTKKNGGRVISVGTTSCRTLESATDENGILQAGSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+ +D L++NFHLP+STLLMLVSA G E Y+ A+ YRF+S+GD L+
Sbjct: 285 YHFKMIDGLITNFHLPESTLLMLVSALAGKEHIMAAYEEAVKERYRFFSFGDAMLI 340
>gi|269213885|ref|ZP_06158238.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
cinerea ATCC 14685]
gi|269145271|gb|EEZ71689.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
cinerea ATCC 14685]
Length = 356
Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 211/356 (59%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P++ + D + DLP ++ D +V
Sbjct: 11 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPDMP----LQDRVFGDLPDYVGEGDVLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 67 FNNTKVMKARLFGQKDSG-----GRIEALIERVLDSHTALAHIRSSKSPKPGMGLVF--- 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++++ G + + G + + G +PLPPYI +R DA D Y
Sbjct: 119 --EGGIRAVMVER--AGALFCLRFEGGQTVYELLEQNGHLPLPPYI--ERAADADDDSRY 172
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G++ VTLHVGAGTF PV+VE ++H M
Sbjct: 173 QTVYAKYQGAVAAPTAGLHFTEELLLRLKGKGVETAEVTLHVGAGTFQPVRVEKIEEHKM 232
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + T A+ + K+RG ++ +VGTTS+R LE+A E G + G T+IFITPG
Sbjct: 233 HSEWFEVPSETVAAVEAAKARGNKVWAVGTTSMRALESAARETGHLKDGQGDTDIFITPG 292
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF VD L++NFHLPKSTLLMLVSAF G+ + +Y+HA+ YRF+SYGD +L
Sbjct: 293 YRFNVVDRLVTNFHLPKSTLLMLVSAFSGMGHIRAVYRHAVEREYRFFSYGDAMIL 348
>gi|228960691|ref|ZP_04122335.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar pakistani str. T13001]
gi|228798997|gb|EEM45970.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar pakistani str. T13001]
Length = 352
Score = 270 bits (690), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 151/353 (42%), Positives = 209/353 (59%), Gaps = 15/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEDRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDRYRY 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 167 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVQLAFITLHVGLGTFRPVSADTIEEHHM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 227 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 286
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 287 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGD 339
>gi|157150443|ref|YP_001450865.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus gordonii str. Challis substr. CH1]
gi|157075237|gb|ABV09920.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus gordonii str. Challis substr. CH1]
Length = 342
Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 158/353 (44%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD++RL+VV + SD + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASRLLVVDRSSGE---FSDQHFDSIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLYGEK----PGTGGHVELLLLKNTEGDQWEVLAKPAKRLKVGAQVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+D+ G ++ F GI LE SL G +PLPPYI K R Y
Sbjct: 111 -GDGRLTATVVDELEHGGRIVRFDYQGIFLEVLESL-GEMPLPPYIHEKLADRER----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+++ + G+K+ ++TLHVG GTF PV V++ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTKELLAQIEAKGVKLVYLTLHVGLGTFRPVSVDNLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L VK+ G R+++VGTTS+R LET + G I SG+TNIFI P
Sbjct: 225 HSEFYTLSEEAAATLREVKANGHRVIAVGTTSIRTLETIGNKFKGDIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY+++ VD +NFHLPKSTL+MLVSAF G + T K Y+HAI+ YRF+S+GD
Sbjct: 285 GYQWQIVDAFSTNFHLPKSTLVMLVSAFAGRDLTLKAYEHAIAERYRFFSFGD 337
>gi|157693175|ref|YP_001487637.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
pumilus SAFR-032]
gi|167016403|sp|A8FFR0|QUEA_BACP2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|157681933|gb|ABV63077.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
pumilus SAFR-032]
Length = 342
Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 150/357 (42%), Positives = 212/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++ FDFDLP IA P+ RD++RLMV++ ++ S + + + D +V
Sbjct: 1 MKLELFDFDLPERLIAQVPLEKRDASRLMVLNKQTG---EVTHDTFSQITDYFQTGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ ++ L + + W +P+K +KKG ++ F
Sbjct: 58 LNNTRVLPARLFGMK----EDTGAKVELLLLKQEEGDKWETLVKPAKRVKKGTVITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A ++ G + F +GI E SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLQAVCTEELEHGGRKVEFQYTGIFYEVLESL-GEMPLPPYI--KEQLDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT+ LL L G+ + F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYSKEVGSAAAPTAGLHFTNELLDALKEKGVHIAFITLHVGLGTFRPVSADRIEEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E ++ TA LN V+ GGRI+SVGTTS R LET A+ DG SG+T+IFI P
Sbjct: 225 HAEFYEMNEETAAELNRVRKEGGRIISVGTTSTRTLETIASAHDGEFKASSGWTSIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D +++NFHLPKS+L+MLVSA G E K Y A+ YRF+S+GD L+
Sbjct: 285 GYTFKAIDGMITNFHLPKSSLIMLVSALAGREHVLKAYNEAVKEEYRFFSFGDAMLI 341
>gi|307709512|ref|ZP_07645968.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus mitis SK564]
gi|307619731|gb|EFN98851.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus mitis SK564]
Length = 342
Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 156/358 (43%), Positives = 211/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + H + D+ L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRDTGEMQDKHFHSIIDM---LEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQK----EETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLEVLESL-GEMPLPPYIHEK--LDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGRI++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAASTLRSVKENGGRIIAVGTTSIRTLETVGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|298492038|ref|YP_003722215.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase ['Nostoc
azollae' 0708]
gi|298233956|gb|ADI65092.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase ['Nostoc
azollae' 0708]
Length = 372
Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 154/365 (42%), Positives = 214/365 (58%), Gaps = 23/365 (6%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVH-PNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+D++LPP IA P PRD++RL+VV+ PN+ + +H+ DLP L D +V NNT
Sbjct: 18 YDYELPPELIAQNPAVPRDTSRLLVVNSPNIGEEIPALNHIFRDLPDLLQPGDLLVMNNT 77
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD-GQ 123
KV+ A+L G + E+ L PN W +P K K G + F G+
Sbjct: 78 KVMPARLYGRKLTG-----AEVEVLLLEEKQPNCWLALVKPGKHFKVGTKIIFGGNKLGR 132
Query: 124 SR---------LEATVIDK-WNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPI 172
++ L A V+DK TG LL F + L + + G IPLPPYI
Sbjct: 133 AKHPATTNDDELMAIVVDKDTATGGRLLQFDLPEYRSLVQVLENFGEIPLPPYITGSTAA 192
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D + YQT YA+ G++AAPTAGLHFT LL +L + GI F+TLHVG GTF PV+V
Sbjct: 193 DEQ----YQTVYAQQTGAIAAPTAGLHFTPELLEKLRARGINQAFLTLHVGVGTFRPVEV 248
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
ED H MHSE +++ T + + + K+ GGRI+++GTT +R LE A + G + P+ G
Sbjct: 249 EDVTTHQMHSEWIEVNSATVEEIRATKAAGGRIIAIGTTVVRALEGA-AQSGDLQPYVGK 307
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
N+FI PGY+++ V+ L++NFHLP+S+LLMLVSA G E K+YQ AI+ YRFYS+GD
Sbjct: 308 VNLFIYPGYQWQVVEGLITNFHLPRSSLLMLVSALIGRERLLKIYQQAIASQYRFYSFGD 367
Query: 353 TSLLF 357
L+
Sbjct: 368 AMLIL 372
>gi|329769851|ref|ZP_08261250.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Gemella
sanguinis M325]
gi|328837905|gb|EGF87529.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Gemella
sanguinis M325]
Length = 342
Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 151/357 (42%), Positives = 209/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EFDF LP IA P+ RD+++L+ ++ + + SD+ + N D +V
Sbjct: 1 MKLEEFDFYLPEELIAQTPLLKRDTSKLLTINRKENT---YEHKVFSDIIDYFNPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + I L N W +P+K IK G I+ F
Sbjct: 58 LNNTRVMPARLYGQK----KDTGAAIEVLLLKNKEHNMWECLVKPAKRIKVGSIVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +EA + + G F GI ER + +GT+PLPPYI + R Y
Sbjct: 111 -GDGIMEAECVKVLDDGFRYFEFKYEGIFQER-LDELGTMPLPPYIKERLTDKER----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT+ LL ++ G+ + ++TLHVG GTF PV VE+ +DH M
Sbjct: 165 QTVYSKEVGSSAAPTAGLHFTNELLDKIKQKGVNIVYLTLHVGLGTFRPVSVENIEDHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE +D TA +N K GGR+ SVGTTS R LET A DG I P SG+TNIFI P
Sbjct: 225 HSEYYTLDEETANVINETKKNGGRVFSVGTTSTRTLETIARDNDGEIVPASGWTNIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
G+ F+ VD L++NFHLPKS+L+MLVSAF E+ ++Y+ A+ + YRF+S+GD ++
Sbjct: 285 GFEFKCVDGLITNFHLPKSSLIMLVSAFYNREKVLELYKIAVENKYRFFSFGDAMII 341
>gi|126700420|ref|YP_001089317.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile 630]
gi|123363078|sp|Q183N9|QUEA_CLOD6 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|115251857|emb|CAJ69692.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein QueA) [Clostridium difficile]
Length = 341
Score = 269 bits (688), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 146/356 (41%), Positives = 202/356 (56%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F FDLP IA P+ R S+RLMV+ I + D+ +LN D +V
Sbjct: 1 MKTRDFKFDLPQELIAQVPIEDRASSRLMVLDKETGN---IEHKVFRDIIEYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G + +I L R ++W +P K K G F
Sbjct: 58 LNNTRVIPARLIGEKL----ETGGKIEFLLLKRTEEDTWQALVKPGKRAKVGTKFSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L V+D + G ++ F GI E + +G +PLPPYI + +D ++ Y
Sbjct: 111 -GNGKLIGEVVDLSDEGSRIIKFHYDGI-FEEILDELGNMPLPPYITAR--LDEKER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT LL+++ G+ + FVTLHVG GTF PVKVED +H M
Sbjct: 165 QTVYSKHNGSAAAPTAGLHFTEELLNKIKEKGVDIAFVTLHVGLGTFRPVKVEDVLNHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +N K G ++ VGTTS R +E+A EDG + SG+T IFI PG
Sbjct: 225 HSEYYMVSQEAADKINRAKENGKNVICVGTTSCRTIESACNEDGKMKETSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA CG + Y A+ YRF+S+GD ++
Sbjct: 285 YKFKVLDKLITNFHLPESTLIMLVSAICGKDNVLNAYNEAVKERYRFFSFGDAMII 340
>gi|164687536|ref|ZP_02211564.1| hypothetical protein CLOBAR_01177 [Clostridium bartlettii DSM
16795]
gi|164603310|gb|EDQ96775.1| hypothetical protein CLOBAR_01177 [Clostridium bartlettii DSM
16795]
Length = 341
Score = 269 bits (688), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 146/356 (41%), Positives = 205/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F+FDLP IA P+ R S++LMV+ I + D+ +LN D +V
Sbjct: 1 MKTSDFNFDLPEELIAQVPIKDRTSSKLMVLDKETGE---IEHRIFRDIIDYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G + +I L R ++W +P K K G F
Sbjct: 58 LNDTRVIPARLIGSKV----ETGGKIEFLLLKRTEDDTWETLVKPGKRAKIGARFSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L A V+ G ++ F +GI E + +G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGKLIAEVVGMGEDGARIVKFEYNGI-FEEILDELGNMPLPPYITEK--LDERER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT LL+++ G+ + FVTLHVG GTF PVKV+D D+H M
Sbjct: 165 QTVYSKHNGSAAAPTAGLHFTEELLAKIKEKGVDLAFVTLHVGLGTFRPVKVDDVDNHQM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +N K+ G R++SVGTTS R +E+ E+GI+ SG+TNIFI PG
Sbjct: 225 HSEFYMVTQEAADKINKAKANGNRVISVGTTSTRTIESVADENGIVKATSGWTNIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+++ +D L++NFHLP+STL+MLVS+ G E Y A+ YRF+S+GD +
Sbjct: 285 YKWKVIDNLITNFHLPESTLIMLVSSLAGKEHVLNAYNEAVKERYRFFSFGDAMFI 340
>gi|303240766|ref|ZP_07327279.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Acetivibrio
cellulolyticus CD2]
gi|302591654|gb|EFL61389.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Acetivibrio
cellulolyticus CD2]
Length = 341
Score = 269 bits (688), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 152/361 (42%), Positives = 206/361 (57%), Gaps = 26/361 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V EF +DLP IA P+ R +RLMVV I + D+ +LN+ D +V
Sbjct: 1 MRVSEFFYDLPEELIAQEPLQDRKQSRLMVVDRKTG---EIEHRIFKDIIEYLNTGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKE-----ISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
N+T+VI A+L G EKE I L + W V +P + K G
Sbjct: 58 LNDTRVIPARLLG---------EKEDTGGKIEFVLLKNTGGDIWEVILKPGRRAKPGSRF 108
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
F G L+A +ID G L+ F G+ E+ + VG +PLPPYI +K
Sbjct: 109 VF----GNGELKAEIIDVVEEGNRLVRFEYEGV-FEQILDRVGIMPLPPYITKK----LE 159
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y+K +GS AAPTAGLHFT+ LL ++ GI++ +VTLHVG GTF PVKVE+
Sbjct: 160 DKERYQTVYSKHKGSAAAPTAGLHFTTELLEKIKEKGIEIAYVTLHVGLGTFRPVKVENI 219
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+H MHSE + +N+ + GG+I++VGTTS R++ET E G + P SG+T+I
Sbjct: 220 LEHKMHSEYYNLKEEDCNKINNTRKNGGKIIAVGTTSCRVIETIGDEFGALKPQSGWTDI 279
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGY F+ VD L++NFHLP+STLLMLVSA G + K Y A++ YRF+S+GD
Sbjct: 280 FIYPGYNFKVVDKLITNFHLPESTLLMLVSALAGRDTIMKAYNEAVNEKYRFFSFGDAMF 339
Query: 356 L 356
+
Sbjct: 340 I 340
>gi|306824944|ref|ZP_07458287.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sp. oral taxon 071 str. 73H25AP]
gi|304432771|gb|EFM35744.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sp. oral taxon 071 str. 73H25AP]
Length = 342
Score = 269 bits (688), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 212/358 (59%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ H + D+ L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETGEMQDKHFHSIIDM---LEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G ++F
Sbjct: 58 MNDTRVLPARLYGQK----EETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRVNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A + ++ G ++ F GI LE SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLSAVITEELTHGGRIVRFEYQGIFLEVLESL-GEMPLPPYIHEK--LDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGRI++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKEDGGRIIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G + YQHAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRDLVLDAYQHAIQERYRFFSFGDAMFIY 342
>gi|67458722|ref|YP_246346.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
felis URRWXCal2]
gi|75536818|sp|Q4UMM7|QUEA_RICFE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|67004255|gb|AAY61181.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
felis URRWXCal2]
Length = 367
Score = 269 bits (687), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 146/388 (37%), Positives = 226/388 (58%), Gaps = 51/388 (13%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA P RD++ L++ + P+ + + D +L D +V
Sbjct: 1 MKLSDFDFDLPTELIAQYPASERDNSDLLIA---TTPPIKTKFYNIID---YLKEGDLLV 54
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KVI A+LN E+ I+ L+ ++S +SWS +A+P++ + GD F+S
Sbjct: 55 FNNSKVIKAKLN---------LERNITINLNQKLSDDSWSAFAKPARKLNIGD--EFYSD 103
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKR---------- 170
+ + + +K+ GEI + F + I + + G +PLP YI R +
Sbjct: 104 NHK----VIITEKFAMGEIKVKFELDNISVFEFLDKYGEMPLPVYIRRSKRHGEEEESSD 159
Query: 171 -------------------PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISI 211
D D + YQT Y++I+GSVAAPTAGLHFT +L +L +
Sbjct: 160 EAISSQNPEIATESKRTPSNDDKLDSLRYQTIYSQIEGSVAAPTAGLHFTKEILDKLKAK 219
Query: 212 GIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTT 271
G+++ FVTLHVGAGTF+PVK E+ +H +H+E I TA+ +N K RI++VGTT
Sbjct: 220 GVQIAFVTLHVGAGTFLPVKTENIHEHKIHTEYCSITPETAEIINKAKQERRRIIAVGTT 279
Query: 272 SLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIE 331
+LR LE++ +G++ S T+IFITPG++F+ D+L++NFH PKSTL ML+ AF G +
Sbjct: 280 TLRTLESSCN-NGVVKAGSFETDIFITPGFKFQTTDMLLTNFHFPKSTLFMLICAFAGFK 338
Query: 332 ETKKMYQHAISHAYRFYSYGDTSLLFQK 359
E ++Y++AI RF+SYGD ++L++K
Sbjct: 339 EMHELYKYAIKEKMRFFSYGDATVLYRK 366
>gi|157828160|ref|YP_001494402.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
rickettsii str. 'Sheila Smith']
gi|165932858|ref|YP_001649647.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
rickettsii str. Iowa]
gi|166216749|sp|A8GR69|QUEA_RICRS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|189038875|sp|B0BWL5|QUEA_RICRO RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|157800641|gb|ABV75894.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
rickettsii str. 'Sheila Smith']
gi|165907945|gb|ABY72241.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
rickettsii str. Iowa]
Length = 365
Score = 269 bits (687), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 149/387 (38%), Positives = 228/387 (58%), Gaps = 50/387 (12%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA P RD++ L++ ++ P+ + + D +L D +V
Sbjct: 1 MKLSDFDFDLPSELIAQYPSSERDNSDLLIA---VTPPIKTKFYNIID---YLKEGDLLV 54
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KVI AQLN K I+ L+ ++S +SWS +A+P++ + D +F +
Sbjct: 55 FNNSKVIKAQLN---------LGKNITINLNQKLSDDSWSAFAKPARKLHVNDEFYFDNH 105
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI-------- 172
+ + +K GEI + F ++ I + ++ G +PLP YI R +
Sbjct: 106 ------KVIITEKLAMGEIKVKFKLNDISVFEFLNKYGEMPLPVYIRRSHSLCHPVATTT 159
Query: 173 DARDYVD--------------------YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIG 212
++ Y++ YQT Y++I+GSVAAPTAGLHFT ++L +L + G
Sbjct: 160 GSKTYLNNDWIPWSNHGMTNTQNDNDRYQTVYSQIEGSVAAPTAGLHFTKDILDKLKAEG 219
Query: 213 IKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTS 272
I+ F+TLHVGAGTF+PVK E+ +H MH+E I TA+ +N K G RI++VGTT+
Sbjct: 220 IQATFLTLHVGAGTFLPVKTENIHEHKMHTEYCSITPDTAEIINKAKQEGKRIIAVGTTT 279
Query: 273 LRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEE 332
LR LE++ +GI+ S T+IFITPG++F+ D+L++NFH PKSTL ML+ AF G +E
Sbjct: 280 LRTLESSCN-NGIVKAGSFKTDIFITPGFKFQTADMLLTNFHFPKSTLFMLICAFAGFKE 338
Query: 333 TKKMYQHAISHAYRFYSYGDTSLLFQK 359
++Y++AI A RF+SYGD +LL +K
Sbjct: 339 MHELYKYAIKEAMRFFSYGDATLLCRK 365
>gi|291539017|emb|CBL12128.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Roseburia
intestinalis XB6B4]
Length = 345
Score = 269 bits (687), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 202/356 (56%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+F +DLP IA P+ R S+RLMV+ N ++ + D+ +L D +V
Sbjct: 1 MDVKDFYYDLPQELIAQDPLKDRSSSRLMVLDKNTG---EVTHRVFKDITDYLRPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L GV+ E +I L R + W +P K K G + F
Sbjct: 58 INNTKVIPARLYGVK----EGTEAKIEILLLKRKENDIWETLVKPGKKCKVGTKISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L VID G L+ F GI E + +G +PLPPYI + +D Y
Sbjct: 111 -GDGLLTGEVIDIVEEGNRLIQFHYDGI-FEEILDQLGQMPLPPYITHQ----LQDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ +G+++ VTLHVG GTF PVK D H M
Sbjct: 165 QTVYAKYDGSAAAPTAGLHFTPELLKKVKEMGVEIAEVTLHVGLGTFRPVKETDVLKHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I+ A +N K G R+++VGTTS R LE A+ E+G + SG+T IFI PG
Sbjct: 225 HSEFYRIEQSEADKINHAKETGHRVIAVGTTSTRTLEAASDENGFLRETSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD L+
Sbjct: 285 YRFKVIDSLITNFHLPESTLVMLVSALAGREHVLNAYEIAVQEKYRFFSFGDAMLI 340
>gi|296840698|ref|ZP_06863236.2| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
polysaccharea ATCC 43768]
gi|296840202|gb|EFH24140.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
polysaccharea ATCC 43768]
Length = 356
Score = 269 bits (687), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 211/356 (59%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P++ + D + DLP ++ D +V
Sbjct: 11 MDISDFDFTLPEHLIAQHPPEVRGSSRLLVALPDMP----LQDRVFGDLPDYVGEGDVLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K L F
Sbjct: 67 FNNTKVMKARLFGQKDSG-----GRIEALIERVLDSHTALAHIRSSKSPKPDTKLIF--- 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ +EA ++++ GE+ + S + + G +PLPPYI +R DA D Y
Sbjct: 119 --EGGIEAVMLER--VGELFCLRFNSKQTVYELLEQNGHLPLPPYI--ERAADADDDSRY 172
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G++ VTLHVGAGTF PV+VE ++H M
Sbjct: 173 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGVETAEVTLHVGAGTFQPVRVEKIEEHKM 232
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + T A+ + K+RG ++ +VGTTS+R LE+A E G + G T+IFITPG
Sbjct: 233 HSEWFEVPSETVAAVGAAKARGNKVWAVGTTSMRALESAARETGHLKDGQGDTDIFITPG 292
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF D L++NFHLPKSTLLMLVSAF G+ + +Y+HA+ YRF+SYGD +L
Sbjct: 293 YRFNVADRLITNFHLPKSTLLMLVSAFSGMGHIRAVYRHAVEREYRFFSYGDAMIL 348
>gi|240146016|ref|ZP_04744617.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseburia
intestinalis L1-82]
gi|257201829|gb|EEV00114.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseburia
intestinalis L1-82]
gi|291536123|emb|CBL09235.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Roseburia
intestinalis M50/1]
Length = 345
Score = 269 bits (687), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 202/356 (56%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+F +DLP IA P+ R S+RLMV+ N ++ + D+ +L D +V
Sbjct: 1 MDVKDFYYDLPQELIAQDPLEDRSSSRLMVLDKNTG---EVTHRVFKDITDYLRPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L GV+ E +I L R + W +P K K G + F
Sbjct: 58 INNTKVIPARLYGVK----EGTEAKIEILLLKRKENDIWETLVKPGKKCKVGTKISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L VID G L+ F GI E + +G +PLPPYI + +D Y
Sbjct: 111 -GDGLLTGEVIDIVEEGNRLIQFHYDGI-FEEILDQLGQMPLPPYITHQ----LQDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ +G+++ VTLHVG GTF PVK D H M
Sbjct: 165 QTVYAKYDGSAAAPTAGLHFTPELLKKVKEMGVEIAEVTLHVGLGTFRPVKETDVLKHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I+ A +N K G R+++VGTTS R LE A+ E+G + SG+T IFI PG
Sbjct: 225 HSEFYRIEQSEADKINHAKETGHRVIAVGTTSTRTLEAASDENGFLRETSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD L+
Sbjct: 285 YRFKVIDSLITNFHLPESTLVMLVSALAGREHVLNAYEIAVQEKYRFFSFGDAMLI 340
>gi|322392655|ref|ZP_08066115.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus peroris ATCC 700780]
gi|321144647|gb|EFX40048.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus peroris ATCC 700780]
Length = 342
Score = 268 bits (686), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 205/358 (57%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL++V+ D + L DA+V
Sbjct: 1 MNTNDFDFDLPEELIAQTPLEQRDASRLLIVNRKTGE---FQDRHFHSIIEMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G + + L + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLHGEK----EETGGHVELLLLKNTVGDEWEVLAKPAKRLKVGARVIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE SL G +PLPPYI K R Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYEGIFLEVLESL-GEMPLPPYIHEKLDDQER----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLEEIQQKGVHLVYLTLHVGLGTFRPVTVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L +K GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRQIKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E + YQHAI YRF+S+GD ++
Sbjct: 285 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLEAYQHAIEERYRFFSFGDAMFIY 342
>gi|225857051|ref|YP_002738562.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae P1031]
gi|225724890|gb|ACO20742.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae P1031]
Length = 342
Score = 268 bits (686), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 210/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ H + D+ L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETGEMQDKHFHSIIDM---LEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKM----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLEVLESL-GEMPLPPYIHEK--LDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|304321743|ref|YP_003855386.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Parvularcula bermudensis HTCC2503]
gi|303300645|gb|ADM10244.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Parvularcula bermudensis HTCC2503]
Length = 356
Score = 268 bits (686), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 152/365 (41%), Positives = 206/365 (56%), Gaps = 22/365 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FD+DLP +IAL P RD ARL++V PN L++ L +D ++
Sbjct: 1 MRVDLFDYDLPEEQIALVPPPERDGARLLIVPPNGP----FGHDLIAHLAEHFGPSDVLI 56
Query: 61 FNNTKVITAQLNGVRFCH---------INRREKEISCTLHMRVSPNSWSVYARPSKVIKK 111
N+TKVI A L G+R + + C L R W + RP+K ++
Sbjct: 57 LNDTKVIPATLAGMRPARDVGGGDPAGVGIDITLLKC-LEERDDGVRWQAFVRPAKRVRA 115
Query: 112 GDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRP 171
GD + + + + E +L ++ + + GT+PLPPYIARKR
Sbjct: 116 GDDIEIGPVTAR-------VKRREGAEAVLHIPLTPSAFQSFLYDHGTMPLPPYIARKRA 168
Query: 172 IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK 231
++ D YQT + K GSVAAPTAGLHFT LLS + G + VTLHVGAGTF+P+
Sbjct: 169 VEVSDQDRYQTVFGKRPGSVAAPTAGLHFTDRLLSAIAERGATILRVTLHVGAGTFLPIT 228
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSG 291
D DH MHSE G + P A+ L + K+ G RI VGTT+LR++ETA + G + ++G
Sbjct: 229 AADCTDHRMHSEWGEVSPPVAERLRAAKAGGERITCVGTTALRIVETA-AQSGEVQAFAG 287
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T+IFITPG+ F+ D L++NFHLP+STLLMLVSAF G E Y+ AI+ YRF+SYG
Sbjct: 288 ETDIFITPGFSFQCADRLLTNFHLPRSTLLMLVSAFSGRERILSAYREAINEGYRFFSYG 347
Query: 352 DTSLL 356
D LL
Sbjct: 348 DACLL 352
>gi|313201955|ref|YP_004040613.1| s-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylovorus sp. MP688]
gi|312441271|gb|ADQ85377.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylovorus sp. MP688]
Length = 351
Score = 268 bits (686), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 153/359 (42%), Positives = 213/359 (59%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++FDF LP IA P RD +RL+ + N I+DH +LP FLN+ D ++
Sbjct: 1 MRTEDFDFFLPEELIAQFPAAERDGSRLLRLDGNSGA---IADHQFRELPQFLNAGDVLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + I + + + + R S+ K G F
Sbjct: 58 FNDTRVIKARLQGHK-----ESGGSIELLIERPLDTHRALAHIRASRSPKPGS--RIFIG 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DG + A VI++ + ++ L+ L + G +PLPPYI DA D Y
Sbjct: 111 DG---IPARVIERQD--DLFLIEVEHTTPLLDLLDQYGALPLPPYITHA--ADAEDDERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF +L RL + GI++ +VTLHVGAGTF PV+V+D +H M
Sbjct: 164 QTVYARTPGAVAAPTAGLHFNQAMLDRLQTAGIQIAYVTLHVGAGTFQPVRVDDISEHRM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSEI + T +N+ ++ G +I +VGTT+LR LE+A G + SG T+IFITPG
Sbjct: 224 HSEIYTVPPATVDLINTARAAGHKITAVGTTALRALESA-ARSGALVAGSGETDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRF+ V+ L++NFHLPKSTL+MLVSAF G+E + Y HAI+ YRF+SYGD LL ++
Sbjct: 283 YRFQVVERLLTNFHLPKSTLMMLVSAFAGVENIRAAYAHAIASRYRFFSYGDAMLLERR 341
>gi|225854863|ref|YP_002736375.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae JJA]
gi|225723833|gb|ACO19686.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae JJA]
Length = 342
Score = 268 bits (686), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 156/358 (43%), Positives = 210/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V N + H S + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIV--NRETGEMQDKHFYS-IIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLEVLESL-GEMPLPPYIHEK--LDDRE--RY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|160893033|ref|ZP_02073821.1| hypothetical protein CLOL250_00571 [Clostridium sp. L2-50]
gi|156865116|gb|EDO58547.1| hypothetical protein CLOL250_00571 [Clostridium sp. L2-50]
Length = 349
Score = 268 bits (686), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 154/362 (42%), Positives = 207/362 (57%), Gaps = 26/362 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F +DLP IA P+ RD++RLMV+ I D+ ++L D +V
Sbjct: 9 MQLSDFYYDLPQELIAQDPLLKRDNSRLMVLDREEGT---IEHKHFYDVISYLKEGDCLV 65
Query: 61 FNNTKVITAQLNGVRFCHINRREKE-----ISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
N+TKVI A+L G EKE I L R+ +W +P K + G +
Sbjct: 66 INDTKVIPARLIG---------EKEGTGAAIEVLLLKRLDDCTWETLVKPGKKARVGARI 116
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
F G +L VID G ++ F GI E + +G +PLPPYI K
Sbjct: 117 IF----GGGKLVGEVIDIVEEGNRIVRFEYEGI-FEEILDELGQMPLPPYITHK----LE 167
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT YA+ +GS AAPTAGLHFT LL + + GIK+ VTLHVG GTF PVK ++
Sbjct: 168 DKNRYQTVYAEHEGSAAAPTAGLHFTKELLEEIKAKGIKIAHVTLHVGLGTFRPVKEDNI 227
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
DH MHSE ID A+ +N K GGRI++VGTTS R LET E+G++ SG+T+I
Sbjct: 228 LDHHMHSEFYVIDEKAAETINETKKNGGRIIAVGTTSTRTLETVADENGMLRACSGWTDI 287
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGY+F+A+D L++NFHLP+STLLMLVSA E+ + Y+ A+ YRF+S+GD L
Sbjct: 288 FIYPGYKFKAIDGLITNFHLPESTLLMLVSALYSREKILEAYKVAVEERYRFFSFGDAML 347
Query: 356 LF 357
+
Sbjct: 348 IL 349
>gi|149002808|ref|ZP_01827734.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP14-BS69]
gi|237650471|ref|ZP_04524723.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae CCRI 1974]
gi|237821798|ref|ZP_04597643.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae CCRI 1974M2]
gi|147759102|gb|EDK66096.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP14-BS69]
Length = 342
Score = 268 bits (686), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 211/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ H + D+ L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETGEMQDKHFHSIIDM---LEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLEVLESL-GEMPLPPYIHEK--LDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD+ ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDSMFIY 342
>gi|262283157|ref|ZP_06060924.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sp. 2_1_36FAA]
gi|262261409|gb|EEY80108.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sp. 2_1_36FAA]
Length = 342
Score = 268 bits (686), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 156/354 (44%), Positives = 210/354 (59%), Gaps = 17/354 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD++RL++V + SD + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASRLLIVDRSSGE---FSDQHFDSIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + + W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLYGEK----PGTGGHVELLLLKNIEGDHWEVLAKPAKRLKVGAQVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+++ G ++ F GI LE SL G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVVEELEHGGRIVRFDYQGIFLEVLESL-GEMPLPPYIHEKLA----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+++ + G+K+ ++TLHVG GTF PV V++ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTKELLAQIEAKGVKLVYLTLHVGLGTFRPVSVDNLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L VK+ G R+++VGTTS+R LET + G I SG+TNIFI P
Sbjct: 225 HSEFYTLSEEAAATLREVKANGHRVIAVGTTSIRTLETIGNKFQGDIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
GY+++ VD +NFHLPKSTL+MLVSAF G + T K Y+HAI+ YRF+S+GD
Sbjct: 285 GYQWQIVDAFSTNFHLPKSTLVMLVSAFAGRDLTLKAYEHAIAERYRFFSFGDA 338
>gi|257870720|ref|ZP_05650373.1| queuosine biosynthesis protein [Enterococcus gallinarum EG2]
gi|257804884|gb|EEV33706.1| queuosine biosynthesis protein [Enterococcus gallinarum EG2]
Length = 343
Score = 268 bits (685), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 157/357 (43%), Positives = 209/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++FDF+LP IA P+ R S+RL+VV + D D+ L DA+V
Sbjct: 2 LTTEDFDFELPEELIAQTPLSDRSSSRLLVVDRESGA---MEDKRFYDIIDELAPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A++ G + + L + +SW +P+K K G + F
Sbjct: 59 MNDTRVLPARIYGEKI----ETGAHLEILLLNNIEGDSWETLIKPAKRAKVGTKITF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RLEA V + G ++ FS GI LE SL G +PLPPYI + D Y
Sbjct: 112 -GDGRLEAVVEKELEHGGRIIRFSYDGIFLEILESL-GEMPLPPYIKER----LEDPDRY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ G+K+ ++TLHVG GTF PV V++ DH M
Sbjct: 166 QTVYAKENGSAAAPTAGLHFTPELLKKIADKGVKLVYLTLHVGLGTFRPVSVDNIADHEM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A LN V++ GG+IV+VGTTS+R LET T+ DG I SG+T+IFITP
Sbjct: 226 HSEFYRLTEEAAAQLNDVRANGGKIVAVGTTSIRTLETIGTKFDGDIKADSGWTSIFITP 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ V +NFHLPKSTL+MLVSAF G + T + YQHAI YRF+S+GD L
Sbjct: 286 GYQFKVVQAFSTNFHLPKSTLVMLVSAFAGRDLTLEAYQHAIDERYRFFSFGDAMFL 342
>gi|301794456|emb|CBW36890.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae INV104]
Length = 342
Score = 268 bits (685), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 154/358 (43%), Positives = 210/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETGE---MQDKHFHSIINMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLEVLESL-GEMPLPPYIHEK--LDDRE--RY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD+ ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDSMFIY 342
>gi|291519050|emb|CBK74271.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Butyrivibrio fibrisolvens 16/4]
Length = 345
Score = 268 bits (685), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 146/356 (41%), Positives = 205/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+VK+FD++LP IA P+ R ++RLMV+ + I+ D+ +L D +V
Sbjct: 1 MLVKDFDYELPEELIAQDPLEKRSNSRLMVLDKHTG---EIAHRHFYDIKEYLRPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G R + + L R+S N W +P K + G + F
Sbjct: 58 INNTRVIPARLYGARVGSGGK----VEILLLKRISDNQWECLVKPGKKARPGMEISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L ++D + G ++ F+ GI E + +G +PLPPYI K +D Y
Sbjct: 111 -GDGLLIGKIVDIVDEGNRIIEFTYEGI-FEEILDKLGEMPLPPYITHK----LQDRDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + ++G+++ VTLHVG GTF PVK ++ DH M
Sbjct: 165 QTVYAKFDGSAAAPTAGLHFTPELLEEVKAMGVRIAEVTLHVGLGTFRPVKEDEVLDHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I +N K+ GGR++SVGTTS R LE+A ++P SG+T IFI PG
Sbjct: 225 HSEYYEITQEACDIINETKANGGRVISVGTTSTRTLESAAEAGKPLSPKSGWTQIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD ++
Sbjct: 285 YEFKVIDCLITNFHLPQSTLIMLVSALAGREHVLAAYKKAVEEKYRFFSFGDAMMI 340
>gi|255101975|ref|ZP_05330952.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile QCD-63q42]
gi|255307843|ref|ZP_05352014.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile ATCC 43255]
Length = 341
Score = 268 bits (685), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 146/356 (41%), Positives = 201/356 (56%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F FDLP IA P+ R S+RLMV+ I + D+ +LN D +V
Sbjct: 1 MKTSDFKFDLPQELIAQVPIEDRASSRLMVLDKETGN---IEHKVFRDIIEYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G + +I L R ++W +P K K G F
Sbjct: 58 LNNTRVIPARLIGEKL----ETGGKIEFLLLKRTEEDTWQALVKPGKRAKVGTKFSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L V+D + G ++ F GI E + +G +PLPPYI + +D ++ Y
Sbjct: 111 -GNGKLIGEVVDLSDEGSRIIKFHYDGI-FEEILDELGNMPLPPYITAR--LDEKER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT LL+++ G+ + FVTLHVG GTF PVKVED +H M
Sbjct: 165 QTVYSKHNGSAAAPTAGLHFTEELLNKIKEKGVDIAFVTLHVGLGTFRPVKVEDVLNHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +N K G ++ VGTTS R +E+A EDG + SG+T IFI PG
Sbjct: 225 HSEYYMVSQEAADKINRAKENGKNVICVGTTSCRTIESACNEDGKMKETSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA CG + Y A+ YRF+S+GD ++
Sbjct: 285 YKFKVLDKLITNFHLPESTLIMLVSAICGKDNVLNAYNEAVKERYRFFSFGDAMII 340
>gi|254976399|ref|ZP_05272871.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile QCD-66c26]
gi|255093785|ref|ZP_05323263.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile CIP 107932]
gi|255315536|ref|ZP_05357119.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile QCD-76w55]
gi|255518199|ref|ZP_05385875.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile QCD-97b34]
gi|255651315|ref|ZP_05398217.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile QCD-37x79]
gi|260684379|ref|YP_003215664.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile CD196]
gi|260688038|ref|YP_003219172.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile R20291]
gi|306521147|ref|ZP_07407494.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile QCD-32g58]
gi|260210542|emb|CBA65071.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile CD196]
gi|260214055|emb|CBE06218.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile R20291]
Length = 341
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 146/356 (41%), Positives = 201/356 (56%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F FDLP IA P+ R S+RLMV+ I + D+ +LN D +V
Sbjct: 1 MKTSDFKFDLPQELIAQVPIEDRASSRLMVLDKETGN---IEHKVFRDIIEYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G + +I L R ++W +P K K G F
Sbjct: 58 LNNTRVIPARLIGEKL----ETGGKIEFLLLKRTEEDTWQALVKPGKRAKVGTKFSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L V+D + G ++ F GI E + +G +PLPPYI + +D ++ Y
Sbjct: 111 -GNGKLIGEVVDLSDEGSRIIKFLYDGI-FEEILDELGNMPLPPYITAR--LDEKER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT LL+++ G+ + FVTLHVG GTF PVKVED +H M
Sbjct: 165 QTVYSKHNGSAAAPTAGLHFTEELLNKIKEKGVDIAFVTLHVGLGTFRPVKVEDVLNHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +N K G ++ VGTTS R +E+A EDG + SG+T IFI PG
Sbjct: 225 HSEYYMVSQEAADKINRAKENGNNVICVGTTSCRTIESACNEDGKMKETSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA CG + Y A+ YRF+S+GD ++
Sbjct: 285 YKFKVLDKLITNFHLPESTLIMLVSAICGKDNVLNAYNEAVKERYRFFSFGDAMII 340
>gi|255283315|ref|ZP_05347870.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bryantella
formatexigens DSM 14469]
gi|255266169|gb|EET59374.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bryantella
formatexigens DSM 14469]
Length = 341
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 149/356 (41%), Positives = 205/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F FDLP IA P+ R S+RL+V+ + H+ ++ +LN D +V
Sbjct: 1 MKTSDFYFDLPQELIAQDPLEDRSSSRLLVLDRRTGQ---MEHHIFKEIVHYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + + +I L R + W +P K K G + F
Sbjct: 58 INDTKVIPARLFGSKVG----TDAKIEILLLKRREGDVWETLVKPGKKAKPGTQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L V++ G L+ F+ GI E + +G +PLPPYI + +D Y
Sbjct: 111 -GDGILMGEVLEVAEDGNRLIRFTYEGI-FEEILDRLGQMPLPPYITHQ----LKDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + G+ + VTLHVG GTF PVKVE+ H M
Sbjct: 165 QTVYAKHDGSAAAPTAGLHFTPELLQEIRDKGVNIAHVTLHVGLGTFRPVKVEEVTQHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +N K+ GG+I+ VGTTS R +E+A E+GI++ SG+T+IFI PG
Sbjct: 225 HSEFYMVEEEQAELINRTKANGGKIICVGTTSCRTIESAADENGILHAGSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF+ +D L++NFHLP+STLLMLVSA G E +K Y A+ YRF+S+GD L+
Sbjct: 285 YRFKILDELITNFHLPESTLLMLVSALAGKENIEKAYAEAVKERYRFFSFGDAMLI 340
>gi|257081115|ref|ZP_05575476.1| queuosine biosynthesis protein [Enterococcus faecalis E1Sol]
gi|257415434|ref|ZP_05592428.1| queuosine biosynthesis protein [Enterococcus faecalis AR01/DG]
gi|256989145|gb|EEU76447.1| queuosine biosynthesis protein [Enterococcus faecalis E1Sol]
gi|257157262|gb|EEU87222.1| queuosine biosynthesis protein [Enterococcus faecalis ARO1/DG]
Length = 343
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 155/353 (43%), Positives = 210/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++FDFDLP IA P+ R S+RL+VV+ + D D+ L DA+V
Sbjct: 2 LSTEDFDFDLPEELIAQTPLKDRASSRLLVVNKETGA---MEDKHFHDILDELQPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L ++W +P+K K G + F
Sbjct: 59 MNNTRVLPARLYGEK----PETGGHLEVLLLTNTEGDTWETLIKPAKRAKVGTEIQF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A V ++ G ++ F GI LE SL G +PLPPYI K +D D Y
Sbjct: 112 -GDGRLKAVVKEELEHGGRIIEFKYDGIFLEILESL-GEMPLPPYI--KERLDDPDR--Y 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GS AAPTAGLHFT LL + + G+ + ++TLHVG GTF PV V++ ++H M
Sbjct: 166 QTVYAEENGSAAAPTAGLHFTKELLEEIKAKGVHLVYLTLHVGLGTFRPVSVDNIEEHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A+ LN V+ GGRIV+VGTTS+R LET T+ +G I SG+T+IFITP
Sbjct: 226 HSEFYRLTEEAAKQLNEVRQAGGRIVAVGTTSIRTLETIGTKFNGEIQADSGWTDIFITP 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY+F+ V+ +NFHLPKSTL+MLVSAF G + T YQHAI YRF+S+GD
Sbjct: 286 GYQFKVVEAFSTNFHLPKSTLVMLVSAFAGKDLTLAAYQHAIEEKYRFFSFGD 338
>gi|149011658|ref|ZP_01832854.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP19-BS75]
gi|147764089|gb|EDK71021.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP19-BS75]
Length = 342
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 211/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ H + D+ L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETGEMQDKHFHSIIDM---LEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLEVLESL-GEMPLPPYIHEK--LDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKKNGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD+ ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDSMFIY 342
>gi|182684374|ref|YP_001836121.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae CGSP14]
gi|182629708|gb|ACB90656.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae CGSP14]
Length = 346
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 210/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ H + D+ L DA+V
Sbjct: 5 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETGEMQDKHFHSIIDM---LEPGDALV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 62 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE SL G +PLPPYI K +D R+ Y
Sbjct: 115 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLEVLESL-GEMPLPPYIHEK--LDDRE--RY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 169 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 229 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD ++
Sbjct: 289 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDAMFIY 346
>gi|148989540|ref|ZP_01820899.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP6-BS73]
gi|149007314|ref|ZP_01830972.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP18-BS74]
gi|149019372|ref|ZP_01834734.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP23-BS72]
gi|168493320|ref|ZP_02717463.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae CDC3059-06]
gi|221232156|ref|YP_002511309.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae ATCC 700669]
gi|303254571|ref|ZP_07340675.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae BS455]
gi|303259012|ref|ZP_07344991.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP-BS293]
gi|303261696|ref|ZP_07347643.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP14-BS292]
gi|303264365|ref|ZP_07350285.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae BS397]
gi|303265836|ref|ZP_07351733.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae BS457]
gi|303268169|ref|ZP_07353968.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae BS458]
gi|307127015|ref|YP_003879046.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae 670-6B]
gi|147761118|gb|EDK68086.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP18-BS74]
gi|147925083|gb|EDK76164.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP6-BS73]
gi|147931242|gb|EDK82221.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP23-BS72]
gi|183576547|gb|EDT97075.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae CDC3059-06]
gi|220674617|emb|CAR69180.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae ATCC 700669]
gi|301802157|emb|CBW34894.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae INV200]
gi|302598539|gb|EFL65581.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae BS455]
gi|302637276|gb|EFL67764.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP14-BS292]
gi|302639955|gb|EFL70411.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP-BS293]
gi|302642248|gb|EFL72596.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae BS458]
gi|302644571|gb|EFL74821.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae BS457]
gi|302646177|gb|EFL76404.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae BS397]
gi|306484077|gb|ADM90946.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae 670-6B]
gi|332074739|gb|EGI85213.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae GA17545]
Length = 342
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 210/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ H + D+ L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETGEMQDKHFHSIIDM---LEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLEVLESL-GEMPLPPYIHEK--LDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|251798373|ref|YP_003013104.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Paenibacillus sp. JDR-2]
gi|247545999|gb|ACT03018.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Paenibacillus sp. JDR-2]
Length = 348
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 152/360 (42%), Positives = 212/360 (58%), Gaps = 15/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP IA P+ R ++RL+ ++ I+ +DL ++N+ D +V
Sbjct: 1 MNVDWFDFELPEHLIAQTPLADRTASRLLALNKETGE---IAHRTFTDLAEYMNAGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L GV+ +I L ++ + W A+P+K IK G L F
Sbjct: 58 LNNTRVIPARLTGVK----PDTGAKIELLLLKQLEGDRWETLAKPAKRIKVGSELWFGDN 113
Query: 121 -DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G+ L A V D+ + G + F GI + + +G +PLPPYI K ++ R+
Sbjct: 114 GSGEPLLRAIVEDEGDMGGRTIRFRYEGI-FQELLDRLGEMPLPPYI--KERLEERER-- 168
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK +GS AAPTAGLHFT L +L+ G+K+ ++TLHVG GTF P+ V+ ++H
Sbjct: 169 YQTVYAKHEGSAAAPTAGLHFTKEFLQQLVDKGVKLAYITLHVGLGTFRPMSVDKVEEHE 228
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--ATTEDGIINPWSGFTNIFI 297
MHSE +D A +N KS G RI++VGTTS R LET A E G I +G+T+IFI
Sbjct: 229 MHSEYYELDEQNAVIINEAKSSGARIIAVGTTSSRTLETVAARFEGGPIEACNGWTDIFI 288
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY F+ VD L++NFHLPKSTL+MLVSA G E K Y A+ YRF+S+GD ++
Sbjct: 289 FPGYNFKLVDALLTNFHLPKSTLVMLVSALAGREAIMKAYGEAVREEYRFFSFGDAMFIY 348
>gi|260438605|ref|ZP_05792421.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Butyrivibrio crossotus DSM 2876]
gi|292809196|gb|EFF68401.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Butyrivibrio crossotus DSM 2876]
Length = 341
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 146/356 (41%), Positives = 206/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +K F++DLP IA P+ R S+RLMV+H + I + D+ +LN D +V
Sbjct: 1 MDLKAFNYDLPEELIAQDPLEDRSSSRLMVLHKDTG---RIEHKIFRDIIDYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G++ I L R + + W +P K + G + F
Sbjct: 58 INDTKVIPARLMGIK----EDTGAAIEVLLLKRNADDVWECLVKPGKKARTGARIVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L ++D G ++ F GI E + +G +PLPPYI K +D Y
Sbjct: 111 -GEGLLVGEIVDVIEDGNRMIKFHYEGI-FEEILDKLGQMPLPPYITHK----LQDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ G+ V +TLHVG GTF PVKV+ ++H M
Sbjct: 165 QTVYAKNEGSAAAPTAGLHFTKELLEKIKEKGVNVVSITLHVGLGTFRPVKVDKIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E I A +N ++ GGR+++VGTTS R LE+A +DG I SG T+IFI PG
Sbjct: 225 HTETFNISKEAADTINRTRAAGGRVIAVGTTSCRTLESAAADDGTIPARSGDTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+A+D L++NFHLP+STL+MLVSA G + Y+ A+ YRF+S+GD +
Sbjct: 285 YKFKAIDCLITNFHLPESTLIMLVSALAGRDNIMNAYETAVKERYRFFSFGDAMFI 340
>gi|292670916|ref|ZP_06604342.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Selenomonas
noxia ATCC 43541]
gi|292647537|gb|EFF65509.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Selenomonas
noxia ATCC 43541]
Length = 343
Score = 268 bits (684), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 152/360 (42%), Positives = 216/360 (60%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+DLP +IA P PRDS+RLMV++P I H L FL D ++
Sbjct: 1 MDISDFDYDLPQEQIAQVPAEPRDSSRLMVLNPKERT---IQHHYFYQLEDFLKKGDVLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G R ++ L ++ N W V +P K + G ++ F +
Sbjct: 58 FNDTRVIPARLIGER----EHTGGKVEIFLLHQMDKNHWEVLVKPGKKARIGTVISFGEE 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L +ID+ + G ++ F +G+ E + +GT+PLPPYI D Y
Sbjct: 114 -----LSCEIIDRTDFGGRIVRFIYNGV-FEEILDRLGTMPLPPYIHET----LEDRERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y +++GS AAPTAGLHFT L+ RL G++ F+TLHVG GTF PV V+ +DH+M
Sbjct: 164 QTVYNRVKGSAAAPTAGLHFTEALMERLREKGVQFGFITLHVGLGTFRPVHVDVVEDHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I TA+ + + K G R++SVGTTS+R LE A GII SG+T+IFI PG
Sbjct: 224 HREFYSIPPETAELVQTAKKEGRRVISVGTTSIRTLEAAVASAGIIAAGSGWTDIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
Y+F+ VD +++NFHLPKSTL+MLVSAF G + T + Y+ A+ YRF+S+GD +++ Q R
Sbjct: 284 YQFKVVDAVITNFHLPKSTLIMLVSAFAGRDFTLEAYRTAVEERYRFFSFGD-AMMIQMR 342
>gi|315645788|ref|ZP_07898909.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Paenibacillus vortex V453]
gi|315278549|gb|EFU41863.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Paenibacillus vortex V453]
Length = 343
Score = 267 bits (683), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 150/359 (41%), Positives = 213/359 (59%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +DF+LP IA P+ R S+RL+ ++ I+ +D+ LN+ D +V
Sbjct: 1 MNVDLYDFELPEQLIAQTPLLDRSSSRLLTLNKESGQ---INHQTFADIIDSLNAGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + + E L + + W +P K +KKG+++ F
Sbjct: 58 LNDTKVIPARLFGEKEDTGAKAE----VLLLKSMGQDRWEALVKPGKKLKKGNVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L+A + ++ G L FS GI + + +G +PLPPYI K +D RD Y
Sbjct: 111 -GDGKLKAVIEEEGEMGARTLSFSYKGI-FQEILDELGQMPLPPYI--KEKLDDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ + G+ + F+TLHVG GTF P+ V+ +DH+M
Sbjct: 165 QTVYAKHEGSAAAPTAGLHFTEALLEQIRAKGVDIAFITLHVGLGTFRPMSVDVVEDHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGI-INPWSGFTNIFIT 298
H E + TA LN K RGGR+++VGTTS R LET ++ +G + SG+T+IFI
Sbjct: 225 HEEYYSLSQETADLLNETKRRGGRVIAVGTTSCRTLETVGSQMNGEPLRESSGWTSIFIY 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY F VD L++NFHLPKSTL+MLVSA G E K Y+ A+ YRF+S+GD ++
Sbjct: 285 PGYSFTVVDALITNFHLPKSTLVMLVSALAGREHIMKAYKEAVEDKYRFFSFGDAMFIY 343
>gi|194397598|ref|YP_002038064.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae G54]
gi|226713852|sp|B5E5S4|QUEA_STRP4 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|194357265|gb|ACF55713.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae G54]
Length = 342
Score = 267 bits (683), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 210/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ H + D+ L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETGEMQDKHFHSIIDM---LEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDXWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLEVLESL-GEMPLPPYIHEK--LDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|169832445|ref|YP_001694851.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae Hungary19A-6]
gi|238688427|sp|B1ICL6|QUEA_STRPI RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|168994947|gb|ACA35559.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae Hungary19A-6]
Length = 342
Score = 267 bits (683), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 210/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ H + D+ L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETGEMQDKHFHSIIDM---LEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLEVLESL-GEMPLPPYIHEK--LDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKKNGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|225859181|ref|YP_002740691.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae 70585]
gi|225720571|gb|ACO16425.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae 70585]
Length = 342
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 154/358 (43%), Positives = 209/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETGE---MQDKHFHSIINMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLEVLESL-GEMPLPPYIHEK--LDDRE--RY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKKNGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|253574939|ref|ZP_04852279.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Paenibacillus sp. oral taxon 786 str. D14]
gi|251845985|gb|EES73993.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Paenibacillus sp. oral taxon 786 str. D14]
Length = 353
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 151/359 (42%), Positives = 211/359 (58%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +DF+LP IA P+ R ++RL+ ++ I H SD+ +L D +V
Sbjct: 12 MNVDLYDFELPEELIAQTPLAERTASRLLTLNKQTG---EIRHHKFSDILDYLQPGDTLV 68
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G++ + E L + + W +P K +K G ++ F +
Sbjct: 69 LNDTRVIPARLFGIKEGTGAKAE----VLLLKNLGEDRWEALVKPGKKLKTGSVIVFGDE 124
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L ATV + + GE +L F+ GI + +G +PLPPYI K +D R+ Y
Sbjct: 125 -----LRATVESEGDMGERVLRFAYEGI-FNEILDRLGQMPLPPYIKEK--LDDRE--RY 174
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL ++ + G+ + FVTLHVG GTF P+ V+ +DH+M
Sbjct: 175 QTVYSKHEGSAAAPTAGLHFTEELLEQVRAKGVTIAFVTLHVGLGTFRPMSVDRVEDHVM 234
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT--EDGIINPWSGFTNIFIT 298
H E + TA LN K+RGGR+++VGTTS R LET E G I SG+T IFI
Sbjct: 235 HEEYYVLPQETADVLNETKARGGRVIAVGTTSARTLETVAKQCEGGPIVKSSGWTGIFIY 294
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+F VD L++NFHLPKSTL+MLVSA G E + YQ AI+ YRF+S+GD ++
Sbjct: 295 PGYQFGLVDALLTNFHLPKSTLVMLVSALAGRERILQAYQEAINLKYRFFSFGDAMFIY 353
>gi|322388742|ref|ZP_08062339.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus infantis ATCC 700779]
gi|321140361|gb|EFX35869.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus infantis ATCC 700779]
Length = 345
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 153/354 (43%), Positives = 207/354 (58%), Gaps = 17/354 (4%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+FDF LP IA P+ RD+++L++V+ D + L DA+V N+T
Sbjct: 8 DFDFHLPEELIAQTPLEKRDASKLLMVNRKTGE---FQDRHFHSIIEMLEPGDALVMNDT 64
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQS 124
+V+ A+L+G + + L + + W V A+P+K +K G + F G
Sbjct: 65 RVLPARLHGQK----EETGGHVELLLLKNTAGDEWEVLAKPAKRLKVGTRVIF----GDG 116
Query: 125 RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTY 184
RL A V ++ G ++ F GI LE SL G +PLPPYI K +D R+ YQT Y
Sbjct: 117 RLSAVVTEELTHGGRIVRFEYEGIFLEVLESL-GEMPLPPYIHEK--LDDRER--YQTVY 171
Query: 185 AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEI 244
AK GS AAPTAGLHFT LL + G+ + ++TLHVG GTF PV V++ D+H MHSE
Sbjct: 172 AKESGSAAAPTAGLHFTKELLEEIQQKGVHLVYLTLHVGLGTFRPVSVDNLDEHEMHSEF 231
Query: 245 GFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGYRF 303
+ A L VK GGR+++VGTTS+R LET ++ DG I SG+TNIFI PGY +
Sbjct: 232 YQLSEEAAATLRQVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKPGYDW 291
Query: 304 RAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ VD +NFHLPKSTL+MLVSAF G E K YQHAI YRF+S+GD ++
Sbjct: 292 KVVDAFSTNFHLPKSTLVMLVSAFAGRELVLKAYQHAIDEKYRFFSFGDAMFIY 345
>gi|312110089|ref|YP_003988405.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Geobacillus
sp. Y4.1MC1]
gi|311215190|gb|ADP73794.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Geobacillus
sp. Y4.1MC1]
Length = 342
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 156/362 (43%), Positives = 208/362 (57%), Gaps = 27/362 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDFDLP IA P+ RD++RLMV+ I ++ ++L D +V
Sbjct: 1 MKIDLFDFDLPEELIAQTPLPNRDASRLMVLDKKTG---EIRHETFRNILSYLREGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKE-----ISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
N+T+V+ A+L G EKE I L ++ + W +P+K +K G +
Sbjct: 58 LNDTRVMPARLYG---------EKENTGAHIEVLLLKQLEGDRWETLVKPAKRVKAGTKI 108
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
F G RL+AT +D G +L FS GI E + +G +PLPPYI K R
Sbjct: 109 IF----GDGRLQATCVDTLEHGGRVLQFSYRGIFYE-VLEQLGEMPLPPYIKEKLADPER 163
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
YQT YA+ GS AAPTAGLHFT LL + + G+ + F+TLHVG GTF PV VE+
Sbjct: 164 ----YQTVYAREIGSAAAPTAGLHFTEQLLDDIRAKGVHIAFITLHVGLGTFRPVNVENI 219
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTN 294
++H MH+E + TAQ LN K +GGRI++VGTTS R LET A DG SG+T+
Sbjct: 220 EEHDMHAEFYQMTEATAQLLNETKRQGGRIIAVGTTSTRTLETIAARHDGTFVAESGWTD 279
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PGY F+A+D L++NFHLPKSTL+MLVSA G E Y A+ YRF+S+GD
Sbjct: 280 IFIYPGYEFKAIDGLVTNFHLPKSTLIMLVSALAGRENILHAYNVAVKERYRFFSFGDAM 339
Query: 355 LL 356
L+
Sbjct: 340 LI 341
>gi|322389159|ref|ZP_08062720.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus parasanguinis ATCC 903]
gi|321144064|gb|EFX39481.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus parasanguinis ATCC 903]
Length = 342
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 156/353 (44%), Positives = 205/353 (58%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD+++L+++ D + L DA+V
Sbjct: 1 MNTNDFDFDLPEELIAQTPLEKRDASKLLILDRKTGQ---FQDRHFDAILDELEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L+GV+ + L + W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLHGVK----PETGGHVEFLLLKNTQDDCWEVLAKPAKRLKVGATVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV ++ G ++ F GI LE SL G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVEEELEHGGRIVRFHYQGIFLEVLESL-GEMPLPPYIHEKLA----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+ + ++TLHVG GTF PV V++ +DH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTQELLQKIEAKGVHLVYLTLHVGLGTFRPVSVDNLEDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L VK+ G RIV+VGTTS+R LET + DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRQVKAAGKRIVAVGTTSIRTLETIGNKFDGDIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY ++ VD +NFHLPKSTL+MLVSAF G E T + Y HAI YRF+S+GD
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELTLEAYHHAIQERYRFFSFGD 337
>gi|296876827|ref|ZP_06900875.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus parasanguinis ATCC 15912]
gi|296432329|gb|EFH18128.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus parasanguinis ATCC 15912]
Length = 342
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 156/353 (44%), Positives = 205/353 (58%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD+++L+++ D + L DA+V
Sbjct: 1 MNTNDFDFDLPEELIAQTPLEKRDASKLLILDRKTGK---FQDRHFDAILDELEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L+GV+ + L + W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLHGVK----PETGGHVEFLLLKNTQDDCWEVLAKPAKRLKVGATVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV ++ G ++ F GI LE SL G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVEEELEHGGRIVRFHYQGIFLEVLESL-GEMPLPPYIHEKLA----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+ + ++TLHVG GTF PV V++ +DH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTQELLQKIEAKGVHLVYLTLHVGLGTFRPVSVDNLEDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L VK+ G RIV+VGTTS+R LET + DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRQVKAAGKRIVAVGTTSIRTLETIGNKFDGDIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY ++ VD +NFHLPKSTL+MLVSAF G E T + Y HAI YRF+S+GD
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELTLEAYHHAIQERYRFFSFGD 337
>gi|86158966|ref|YP_465751.1| queuosine biosynthesis protein [Anaeromyxobacter dehalogenans
2CP-C]
gi|123498575|sp|Q2IKY3|QUEA_ANADE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|85775477|gb|ABC82314.1| Queuosine biosynthesis protein [Anaeromyxobacter dehalogenans
2CP-C]
Length = 345
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 156/359 (43%), Positives = 210/359 (58%), Gaps = 14/359 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP +A PV PRD++RLMV+ P P + +DLP L D +V
Sbjct: 1 MRLSDFDFALPEGLVAQAPVTPRDASRLMVLAPGEGAP---AHRGFADLPELLAPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + C W + SK I++G +L F
Sbjct: 58 FNDTRVIPARLLGHKAS--GGKVELLLCEPLEGGLGRRWRAMGQASKPIREGAVLAF--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DG LEA V G + G ELE + G IPLPPYI +R DA D Y
Sbjct: 113 DG---LEARVDAVEGEGFYRVTLDRQGAELEAALGRAGRIPLPPYI--RRAPDAEDAARY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ GS AAPTAGLHFT LL+RL + G++ VTLHVG GTF+P++ +D D H M
Sbjct: 168 QTIWARAPGSAAAPTAGLHFTEPLLARLAARGVRRTAVTLHVGPGTFLPIRGDDLDAHRM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A L + ++RGGRIV+VGTTS+R LE+A DG + P G T +FI PG
Sbjct: 228 HGERYEVSPAAAAELAAARARGGRIVAVGTTSVRTLESA-WRDGEVAPGPGRTELFIRPG 286
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
+ FRAVD +++NFHLP+STLL+LV AF G Y+ A++ YRF+SYGD LL ++
Sbjct: 287 HPFRAVDAMVTNFHLPRSTLLVLVCAFGGQGRVLAAYREAVARGYRFFSYGDAMLLLRR 345
>gi|313904205|ref|ZP_07837584.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Eubacterium
cellulosolvens 6]
gi|313471007|gb|EFR66330.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Eubacterium
cellulosolvens 6]
Length = 344
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 147/356 (41%), Positives = 206/356 (57%), Gaps = 15/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F++DLP IA P+ R ++R+M + + D + +++ L D +V
Sbjct: 3 MKTSDFNYDLPVELIAQDPLEDRSASRMMYMDKETG---ELKDEIFTEVIDHLREGDCLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + I L R + W RP K K G + F +
Sbjct: 60 LNDTKVIPARLYGTK----KDTGALIEVLLLTRKQNDVWETLVRPGKKCKIGTEI-VFGE 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+G + VID G + FS GI E + +G +PLPPYI K +D Y
Sbjct: 115 EG--LMTGKVIDVTEDGNRFIQFSYEGI-FEEILDRLGEMPLPPYIKHK----LQDKTMY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
T YAK GS AAPTAGLHFT LL ++ + G+K+ VTLHVG GTF PVKV+D H M
Sbjct: 168 NTVYAKNDGSAAAPTAGLHFTKELLEKISAKGVKIAHVTLHVGLGTFRPVKVDDVTQHKM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE+ ++ A+ +N K+ GGR++ VGTTS R LE+AT E+GI+ P S +TNIFI PG
Sbjct: 228 HSELYIVEEDQAKIINDTKAAGGRVICVGTTSCRTLESATDENGILQPGSAWTNIFIYPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+ +D L++NFHLP+STL+MLVSAF G ++ Y+ A+ YRF+S+GD ++
Sbjct: 288 YTFKIMDGLITNFHLPESTLIMLVSAFAGKDKVMHAYETAVEKKYRFFSFGDAMMI 343
>gi|239827856|ref|YP_002950480.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Geobacillus
sp. WCH70]
gi|259551452|sp|C5D5E6|QUEA_GEOSW RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|239808149|gb|ACS25214.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Geobacillus
sp. WCH70]
Length = 342
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 154/362 (42%), Positives = 212/362 (58%), Gaps = 27/362 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDFDLP IA P+ RD++RLMV+ I ++ ++L+ D +V
Sbjct: 1 MKIDLFDFDLPEELIAQTPLPNRDASRLMVLDKKTG---EIRHETFRNILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKE-----ISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
N+T+V+ A+L G EKE I L ++ + W +P+K +K G +
Sbjct: 58 LNDTRVMPARLYG---------EKENTGANIEVLLLKQLEGDRWETLVKPAKRVKVGTEI 108
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
F G RL+AT +D G +L FS GI E + +G +PLPPYI K R
Sbjct: 109 TF----GDGRLKATCVDTLEHGGRILEFSYQGIFYE-VLEQLGEMPLPPYIKEKLDDPER 163
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
YQT YA+ GS AAPTAGLHFT LL + + G+ + F+TLHVG GTF PV VE+
Sbjct: 164 ----YQTVYAREVGSAAAPTAGLHFTEQLLDDIRAKGVHIAFITLHVGLGTFRPVSVENI 219
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTN 294
++H MH+E + TA+ LN V+ +GGRI++VGTTS R LET A+ +G SG+T+
Sbjct: 220 EEHDMHAEFYQMTEETARLLNEVRQQGGRIIAVGTTSTRTLETIASKHNGAFVAESGWTD 279
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PGY F+A+D L++NFHLPKSTL+MLVSA G E + Y A+ YRF+S+GD
Sbjct: 280 IFIYPGYEFKAIDGLVTNFHLPKSTLIMLVSALAGRENILRAYNAAVKERYRFFSFGDAM 339
Query: 355 LL 356
L+
Sbjct: 340 LI 341
>gi|312867272|ref|ZP_07727482.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus parasanguinis F0405]
gi|311097401|gb|EFQ55635.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus parasanguinis F0405]
Length = 342
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 156/357 (43%), Positives = 206/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD+++L+++ D + L DA+V
Sbjct: 1 MNTNDFDFDLPEELIAQTPLEKRDASKLLILDRKTGQ---FQDRHFDAILDELEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L+GV+ + L + W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLHGVK----PETGGHVEFLLLKNTQDDCWEVLAKPAKRLKVGATVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV ++ G ++ F GI LE SL G +PLPPYI K R Y
Sbjct: 111 -GDGRLTATVEEELEHGGRIVHFHYQGIFLEVLESL-GEMPLPPYIHEKLADRER----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+ + ++TLHVG GTF PV V++ +DH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTQELLQKIEAKGVHLVYLTLHVGLGTFRPVSVDNLEDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L VK+ G RIV+VGTTS+R LET + DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRQVKAAGKRIVAVGTTSIRTLETIGNKFDGDIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY ++ VD +NFHLPKSTL+MLVSAF G E T + Y HAI YRF+S+GD +
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELTLEAYHHAIQERYRFFSFGDAMFI 341
>gi|295399351|ref|ZP_06809333.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Geobacillus
thermoglucosidasius C56-YS93]
gi|294978817|gb|EFG54413.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Geobacillus
thermoglucosidasius C56-YS93]
Length = 342
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 153/357 (42%), Positives = 206/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDFDLP IA P+ RD++RLMV+ I ++ ++L D +V
Sbjct: 1 MKIDLFDFDLPEELIAQTPLPNRDASRLMVLDKKTG---EIHHETFRNILSYLREGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + I L ++ + W +P+K +K G + F
Sbjct: 58 LNDTRVMPARLYGEK----ENTGAHIEVLLLKQLEGDRWETLVKPAKRVKAGTKIIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+AT +D G +L FS GI E + +G +PLPPYI K R Y
Sbjct: 111 -GDGRLQATCVDTLEHGGRVLQFSYRGIFYE-VLEQLGEMPLPPYIKEKLADPER----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GS AAPTAGLHFT LL + + G+ + F+TLHVG GTF PV VE+ ++H M
Sbjct: 165 QTVYAREIGSAAAPTAGLHFTEQLLDDIRAKGVHIAFITLHVGLGTFRPVNVENIEEHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TAQ LN K +GGRI++VGTTS R LET A DG SG+T+IFI P
Sbjct: 225 HAEFYQMTEATAQLLNETKRQGGRIIAVGTTSTRTLETIAARHDGTFVAESGWTDIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSA G E Y A+ YRF+S+GD L+
Sbjct: 285 GYEFKAIDGLVTNFHLPKSTLIMLVSALAGRENILHAYNVAVKERYRFFSFGDAMLI 341
>gi|238650431|ref|YP_002916283.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
peacockii str. Rustic]
gi|259551484|sp|C4K0Y4|QUEA_RICPU RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|238624529|gb|ACR47235.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
peacockii str. Rustic]
Length = 365
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 148/387 (38%), Positives = 227/387 (58%), Gaps = 50/387 (12%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA P RD++ L++ PL+ + ++ +L D +V
Sbjct: 1 MKLSDFDFDLPSELIAQYPSSERDNSDLLIA----VTPLIKTK--FYNIIDYLKEGDLLV 54
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KVI A+LN K I+ L+ ++S +SWS +A+P++ + D +F +
Sbjct: 55 FNNSKVIKAKLN---------LGKNITINLNQKLSDDSWSAFAKPARKLHVNDEFYFDNH 105
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI-------- 172
+ + +K GEI + F ++ I + ++ G +PLP YI R +
Sbjct: 106 ------KVIITEKLAMGEIKVKFELNDISVFEFLNKYGEMPLPVYIRRSHSLCHPVATTT 159
Query: 173 DARDYVD--------------------YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIG 212
++ Y++ YQT Y++I+GSVAAPTAGLHFT ++L +L + G
Sbjct: 160 GSKTYLNNDWIPWSNHGMTNTQNDNDRYQTVYSQIEGSVAAPTAGLHFTKDILDKLKAEG 219
Query: 213 IKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTS 272
I+ F+TLHVGAGTF+PVK E+ +H MH+E I TA+ +N K G RI++VGTT+
Sbjct: 220 IQATFLTLHVGAGTFLPVKTENIHEHKMHTEYCSITPDTAEIINKAKQEGKRIIAVGTTT 279
Query: 273 LRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEE 332
LR LE++ +GI+ S T+IFITPG++F+ D+L++NFH PKSTL ML+ AF G +E
Sbjct: 280 LRTLESSCN-NGIVKAGSFKTDIFITPGFKFQTADMLLTNFHFPKSTLFMLICAFAGFKE 338
Query: 333 TKKMYQHAISHAYRFYSYGDTSLLFQK 359
++Y++AI A RF+SYGD +LL +K
Sbjct: 339 MHELYKYAIKEAMRFFSYGDATLLCRK 365
>gi|253578958|ref|ZP_04856229.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251849901|gb|EES77860.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 341
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 150/356 (42%), Positives = 203/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R S+RLM H +L + H +D+ ++ D +V
Sbjct: 1 MKTSDFYYDLPQELIAQDPLEDRSSSRLM--HLSLKDGSIEHRHF-TDVLDYMEEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G H I L R + W +P K + G + F
Sbjct: 58 INDTKVIPARLYG----HKEETGALIEILLLKRRENDIWECLVKPGKKARPGAKITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+ +ID + G L+ F GI E + +G +PLPPYI K +D Y
Sbjct: 111 -GNGILKGKIIDVVDEGNRLIQFHYEGI-FEEILDQLGEMPLPPYITHK----LKDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ G+ + VTLHVG GTF PVKV+D + H M
Sbjct: 165 QTVYAKNEGSAAAPTAGLHFTKELLEKVKEKGVNIAHVTLHVGLGTFRPVKVDDVESHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +N K G R+++VGTTS R LE+AT EDGI+ SG+T IFI PG
Sbjct: 225 HSEFYIVEEDQAKLINDTKKAGKRVIAVGTTSCRTLESATGEDGILKAGSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD +L
Sbjct: 285 YHFKMIDALITNFHLPESTLVMLVSALAGKENIMHAYEVAVQEKYRFFSFGDAMIL 340
>gi|239637555|ref|ZP_04678527.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus warneri L37603]
gi|239596773|gb|EEQ79298.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus warneri L37603]
Length = 341
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 149/357 (41%), Positives = 215/357 (60%), Gaps = 18/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHL-VSDLPAFLNSNDAI 59
M +++FD+DLP S IA P+ RD +RL+V++ N +HL D+ + N D +
Sbjct: 1 MNIEDFDYDLPESLIAQTPLKNRDQSRLLVLNRNNGN----MEHLHFKDVINYFNPGDTL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 57 VLNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNQLNF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G ++ A I++ + G ++ GI L+ ++ +G +PLPPYI K +D D
Sbjct: 111 --GDGKIIAECIEELDQGGRIMRLHYEGI-LQERLDELGEMPLPPYI--KERLDDPDR-- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT LL + + G+ + F+TLHVG GTF PV V++ DDH
Sbjct: 164 YQTVYAKESGSAAAPTAGLHFTDELLESIKAKGVNIAFITLHVGLGTFRPVSVDNIDDHE 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE + TA LN + +G RI+SVGTTS R LET + SG+T+IFI P
Sbjct: 224 MHSEYYQMTQETADLLNETRKKGHRIISVGTTSTRTLETIRRDHSEFVEKSGWTDIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
G+ ++A+D L++NFHLPKSTL+MLVSAF E YQ A+ YRF+S+GD L+
Sbjct: 284 GFEYKAIDGLITNFHLPKSTLVMLVSAFSSREYILNAYQKAVEMEYRFFSFGDAMLI 340
>gi|319939489|ref|ZP_08013849.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus anginosus 1_2_62CV]
gi|319811475|gb|EFW07770.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus anginosus 1_2_62CV]
Length = 342
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 154/353 (43%), Positives = 211/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD++RL+VV+ + D + L+ DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASRLLVVNHETGQ---MEDTHFDAIIDQLHPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G + + L ++ + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLHGEK----PETGGHVELLLLKNIAGDDWEVLAKPAKRLKVGAAISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+++ G ++ F GI LE SL G +PLPPYI K +D Y
Sbjct: 111 -GDGRLTATVLEELEHGGRIVRFHYQGIFLEVLESL-GEMPLPPYIHEK----LKDRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+++ + G+K+ ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTKELLAQIEAKGVKLVYLTLHVGLGTFRPVSVDNVDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L VK+ G +V+VGTTS+R LET ++ +G I SG+TNIFI P
Sbjct: 225 HSEFYTLSEEAANTLRQVKASGHHVVAVGTTSIRTLETIGSKFNGEIKADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY ++ VD +NFHLPKSTL+MLVSAF G E YQHAI YRF+S+GD
Sbjct: 285 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLSAYQHAIDEKYRFFSFGD 337
>gi|307705266|ref|ZP_07642132.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus mitis SK597]
gi|307621179|gb|EFO00250.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus mitis SK597]
Length = 342
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 154/358 (43%), Positives = 210/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ H + D+ L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETGEMQDKHFHSIIDM---LEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L + + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQK----EETGGHVELLLLKNTAGDEWEVLAKPAKRLKVGTRVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLEVLESL-GEMPLPPYIHEK--LDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAVTLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|261365393|ref|ZP_05978276.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
mucosa ATCC 25996]
gi|288566193|gb|EFC87753.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
mucosa ATCC 25996]
Length = 347
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 151/357 (42%), Positives = 213/357 (59%), Gaps = 20/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P++ + D +LP ++ + D +V
Sbjct: 1 MDISDFDFTLPDQLIAQHPPEVRGSSRLLVALPDMP----LQDRAFGNLPDYIEAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + +I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQK-----ESGGKIEALIERVLDNHTALAHIRSSKSPKPGTKLIF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ + A ++++ + L G + + + G +PLPPYI +R A D
Sbjct: 109 --EGDICAVMVERADE---LFCLRFEGEQTVYELLEQNGHLPLPPYI--ERAAGADDDKR 161
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK QG+VAAPTAGLHFT LL RL + G++ VTLHVGAGTF PV+V+ ++H
Sbjct: 162 YQTVYAKHQGAVAAPTAGLHFTDELLGRLKTKGVETAEVTLHVGAGTFQPVRVDKIEEHK 221
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE + T A+ + +RG ++ +VGTTS+R LE+A E G + G T+IFITP
Sbjct: 222 MHSEWFDVPPETVAAIEAAHARGNKVWAVGTTSMRALESAARETGRLKAGQGDTDIFITP 281
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GYRFR +D L++NFHLPKSTLLMLVSAF G+E + +Y+HA+ H YRF+SYGD +L
Sbjct: 282 GYRFRVIDRLITNFHLPKSTLLMLVSAFSGMEHIRTVYRHAVEHEYRFFSYGDAMVL 338
>gi|28211815|ref|NP_782759.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
tetani E88]
gi|28204257|gb|AAO36696.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
tetani E88]
Length = 344
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 147/352 (41%), Positives = 200/352 (56%), Gaps = 16/352 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M K+FD+ LP IA P+ RD RLMV+ + + D+ +LN D +V
Sbjct: 4 MKAKDFDYYLPEELIAQHPLEKRDECRLMVLDKETGH---VEHKVFKDILDYLNKGDCLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + ++ L R ++W +P K K G F
Sbjct: 61 LNDTRVMPARLIGEK----EETKGKMEFLLLKRTDKDTWETLVKPGKRAKIGSRFIF--- 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
GQ L+A VI G ++ F GI E + +G +PLPPYI K D Y
Sbjct: 114 -GQGELKAEVIGMAEEGSRIVKFEYDGI-FEEVLDRLGQMPLPPYITEK----LEDKEKY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT LL+++ GIK+ F+TLHVG GTF PVK + ++HIM
Sbjct: 168 QTVYSKESGSAAAPTAGLHFTEELLNKIKEKGIKIVFLTLHVGLGTFRPVKEGEIENHIM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I TA +N+ K GGR+++VGTTS R LET ++ G I SG+TNIF+ PG
Sbjct: 228 HSEYYCISKETADIINTTKEAGGRVIAVGTTSCRTLETLGSKHGKIIEDSGWTNIFMYPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
Y F+ D L++NFHLP+STL+MLVSA E Y+ A+ YRF+S+GD
Sbjct: 288 YEFKVTDALITNFHLPQSTLIMLVSALSERERVLNAYEIAVREKYRFFSFGD 339
>gi|229146989|ref|ZP_04275351.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus BDRD-ST24]
gi|228636486|gb|EEK92954.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus BDRD-ST24]
Length = 350
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 151/353 (42%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEDRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVQLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETADLLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGD 337
>gi|327439542|dbj|BAK15907.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
[Solibacillus silvestris StLB046]
Length = 345
Score = 266 bits (681), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 151/353 (42%), Positives = 205/353 (58%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDF LP IA P+ R ++RLMVV+PN L + H + LN+ D +V
Sbjct: 1 MKVEDFDFYLPEELIAQTPLLDRTASRLMVVNPN---SLEVEHHTFGHILDELNAGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L GV+ I L + + + W +P+K +K G ++ F
Sbjct: 58 LNDTRVLPARLMGVK----ADTGANIELLLLKQTNDDEWETLVKPAKRVKTGTVVTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L AT + + G F+ GI E + +G +PLPPYI K D Y
Sbjct: 111 -GDGLLTATCTGELDHGGRTFKFTYDGIFYE-ILDQLGEMPLPPYIREK----LEDQDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL + + G++V F+TLHVG GTF PV V+ +DH M
Sbjct: 165 QTVYAKERGSAAAPTAGLHFTQPLLEAIKAKGVEVVFITLHVGLGTFRPVSVDSIEDHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + A + VK GG+++SVGTTS R LET A+ DG I G+TNIFI P
Sbjct: 225 HSEFYSVSEEAAAVIERVKQAGGKVISVGTTSTRTLETVASKNDGKIVASHGWTNIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY ++A+D L++NFHLPKSTL+MLVSA E Y+ A+ YRF+S+GD
Sbjct: 285 GYEYKAIDGLITNFHLPKSTLVMLVSALASKETIMNAYEQAVKEKYRFFSFGD 337
>gi|65321784|ref|ZP_00394743.1| COG0809: S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
(queuine synthetase) [Bacillus anthracis str. A2012]
Length = 354
Score = 266 bits (681), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 151/353 (42%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 5 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 62 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 115 -GEGKLKATCTGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 169 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVELAFITLHVGLGTFRPVSADTIEEHHM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 229 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 289 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGD 341
>gi|253999982|ref|YP_003052045.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylovorus sp. SIP3-4]
gi|253986661|gb|ACT51518.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylovorus sp. SIP3-4]
Length = 351
Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 153/359 (42%), Positives = 213/359 (59%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++FDF LP IA P RD +RL+ + N I+DH +LP FLN+ D ++
Sbjct: 1 MRTEDFDFFLPEELIAQFPAAERDGSRLLRLDGNSGA---IADHQFRELPQFLNAGDVLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + I + + + + R S+ K G F
Sbjct: 58 FNDTRVIKARLQGHK-----ESGGSIELLIERPLDTHRALAHIRASRSPKPGS--RIFIG 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DG + A VI++ + ++ L+ L + G +PLPPYI DA D Y
Sbjct: 111 DG---IPARVIERQD--DLFLIEVEHVTPLLDLLDQYGALPLPPYITHA--ADAEDDERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF +L RL + GI++ +VTLHVGAGTF PV+V+D +H M
Sbjct: 164 QTIYARTPGAVAAPTAGLHFNQVMLDRLQAAGIQIAYVTLHVGAGTFQPVRVDDISEHRM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSEI + T +N+ ++ G +I +VGTT+LR LE+A G + SG T+IFITPG
Sbjct: 224 HSEIYTVPPATVDLINTARAAGHKITAVGTTALRALESA-ARSGALVAGSGETDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRF+ V+ L++NFHLPKSTL+MLVSAF G+E + Y HAI+ YRF+SYGD LL ++
Sbjct: 283 YRFQVVERLLTNFHLPKSTLMMLVSAFAGVEHIRAAYAHAIASRYRFFSYGDAMLLERR 341
>gi|46577020|sp|Q891Z9|QUEA_CLOTE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
Length = 341
Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 147/352 (41%), Positives = 200/352 (56%), Gaps = 16/352 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M K+FD+ LP IA P+ RD RLMV+ + + D+ +LN D +V
Sbjct: 1 MKAKDFDYYLPEELIAQHPLEKRDECRLMVLDKETGH---VEHKVFKDILDYLNKGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + ++ L R ++W +P K K G F
Sbjct: 58 LNDTRVMPARLIGEK----EETKGKMEFLLLKRTDKDTWETLVKPGKRAKIGSRFIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
GQ L+A VI G ++ F GI E + +G +PLPPYI K D Y
Sbjct: 111 -GQGELKAEVIGMAEEGSRIVKFEYDGI-FEEVLDRLGQMPLPPYITEK----LEDKEKY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT LL+++ GIK+ F+TLHVG GTF PVK + ++HIM
Sbjct: 165 QTVYSKESGSAAAPTAGLHFTEELLNKIKEKGIKIVFLTLHVGLGTFRPVKEGEIENHIM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I TA +N+ K GGR+++VGTTS R LET ++ G I SG+TNIF+ PG
Sbjct: 225 HSEYYCISKETADIINTTKEAGGRVIAVGTTSCRTLETLGSKHGKIIEDSGWTNIFMYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
Y F+ D L++NFHLP+STL+MLVSA E Y+ A+ YRF+S+GD
Sbjct: 285 YEFKVTDALITNFHLPQSTLIMLVSALSERERVLNAYEIAVREKYRFFSFGD 336
>gi|168491320|ref|ZP_02715463.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae CDC0288-04]
gi|183574488|gb|EDT95016.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae CDC0288-04]
Length = 342
Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 154/358 (43%), Positives = 210/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ H + D+ L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETGEMQDKHFHSIIDM---LEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLEVLESL-GEMPLPPYIHEK--LDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y H+I YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHSIQEHYRFFSFGDAMFIY 342
>gi|325266040|ref|ZP_08132726.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Kingella
denitrificans ATCC 33394]
gi|324982678|gb|EGC18304.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Kingella
denitrificans ATCC 33394]
Length = 340
Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 157/356 (44%), Positives = 208/356 (58%), Gaps = 19/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EFDF LP IA P R S+RL+V N I D DLP ++ + D +V
Sbjct: 1 MHISEFDFHLPEHLIAQNPPAVRGSSRLLVAQHNQP----IEDRHFPDLPNYIATGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + +I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKAT-----GGKIEALIERVLDEHTALAHIRSSKSPKAGTELIF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ L AT+ ++ GE+ + + + G +PLPPYI R P D D Y
Sbjct: 109 --EGSLHATMTER--VGELFKLQFHHRHNVYTLLEEYGALPLPPYIVR--PADDNDDARY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT +LS L G++ VTLHVGAGTF PV+V++ +H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTHEILSALQQKGVEFAEVTLHVGAGTFQPVRVDNIAEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + T + + K+RG R+ SVGTTSLR +E+A G ++ G T+IFITPG
Sbjct: 223 HSEWFDVPEATVAKIQAAKARGNRVWSVGTTSLRAIESA-ARSGSLHAGQGDTDIFITPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y FR +D L++NFHLPKSTLLMLVSAF G E +++Y+HAI YRF+SYGD LL
Sbjct: 282 YTFRVIDGLITNFHLPKSTLLMLVSAFAGSERIREIYRHAIEQEYRFFSYGDAMLL 337
>gi|228941586|ref|ZP_04104134.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar berliner ATCC 10792]
gi|228974515|ref|ZP_04135082.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228785232|gb|EEM33244.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228818093|gb|EEM64170.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar berliner ATCC 10792]
Length = 354
Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 151/353 (42%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 5 MDINLFDFHLPEELIAQVPLEDRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 62 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 115 -GEGKLKATCTGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 169 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVQLAFITLHVGLGTFRPVSADTIEEHHM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 229 HAEYYHMSEETATLLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 289 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGD 341
>gi|30264488|ref|NP_846865.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. Ames]
gi|42783549|ref|NP_980796.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus ATCC 10987]
gi|47529946|ref|YP_021295.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. 'Ames Ancestor']
gi|47566608|ref|ZP_00237430.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus G9241]
gi|49187308|ref|YP_030560.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. Sterne]
gi|49481504|ref|YP_038468.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|165871981|ref|ZP_02216622.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. A0488]
gi|167640749|ref|ZP_02399009.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. A0193]
gi|170688656|ref|ZP_02879861.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. A0465]
gi|177653957|ref|ZP_02935998.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. A0174]
gi|190566984|ref|ZP_03019900.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis Tsiankovskii-I]
gi|196034446|ref|ZP_03101855.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus W]
gi|196039272|ref|ZP_03106578.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus NVH0597-99]
gi|206976063|ref|ZP_03236973.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus H3081.97]
gi|217961909|ref|YP_002340479.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH187]
gi|218905613|ref|YP_002453447.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH820]
gi|227817196|ref|YP_002817205.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. CDC 684]
gi|228929463|ref|ZP_04092484.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228935738|ref|ZP_04098551.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228948132|ref|ZP_04110416.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|228987671|ref|ZP_04147783.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|229123959|ref|ZP_04253151.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus 95/8201]
gi|229141157|ref|ZP_04269698.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus BDRD-ST26]
gi|229158033|ref|ZP_04286104.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus ATCC 4342]
gi|229602726|ref|YP_002868704.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. A0248]
gi|254684173|ref|ZP_05148033.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. CNEVA-9066]
gi|254736520|ref|ZP_05194226.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. Western North America USA6153]
gi|254741558|ref|ZP_05199245.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. Kruger B]
gi|254751343|ref|ZP_05203380.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. Vollum]
gi|254757675|ref|ZP_05209702.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. Australia 94]
gi|301055926|ref|YP_003794137.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis CI]
gi|38372450|sp|Q81LH1|QUEA_BACAN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|81568824|sp|Q730B3|QUEA_BACC1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|81613565|sp|Q6HDA8|QUEA_BACHK RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|226736730|sp|B7JQ04|QUEA_BACC0 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|226736733|sp|B7HQH7|QUEA_BACC7 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|254764263|sp|C3P9A5|QUEA_BACAA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|254764264|sp|C3L6U7|QUEA_BACAC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|30259146|gb|AAP28351.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. Ames]
gi|42739478|gb|AAS43404.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus ATCC 10987]
gi|47505094|gb|AAT33770.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. 'Ames Ancestor']
gi|47556638|gb|EAL14970.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus G9241]
gi|49181235|gb|AAT56611.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. Sterne]
gi|49333060|gb|AAT63706.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queuosine
biosynthesis protein queA) [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|164712271|gb|EDR17807.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. A0488]
gi|167511321|gb|EDR86707.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. A0193]
gi|170667342|gb|EDT18100.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. A0465]
gi|172081012|gb|EDT66090.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. A0174]
gi|190561975|gb|EDV15944.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis Tsiankovskii-I]
gi|195992988|gb|EDX56947.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus W]
gi|196029899|gb|EDX68500.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus NVH0597-99]
gi|206745815|gb|EDZ57212.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus H3081.97]
gi|217063781|gb|ACJ78031.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH187]
gi|218540066|gb|ACK92464.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH820]
gi|227005653|gb|ACP15396.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. CDC 684]
gi|228625486|gb|EEK82242.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus ATCC 4342]
gi|228642320|gb|EEK98610.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus BDRD-ST26]
gi|228659261|gb|EEL14909.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus 95/8201]
gi|228772056|gb|EEM20510.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|228811490|gb|EEM57827.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|228823976|gb|EEM69795.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228830251|gb|EEM75867.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|229267134|gb|ACQ48771.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. A0248]
gi|300378095|gb|ADK06999.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus biovar anthracis str. CI]
Length = 350
Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 151/353 (42%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVELAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGD 337
>gi|29375455|ref|NP_814609.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis V583]
gi|227520114|ref|ZP_03950163.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0104]
gi|227554979|ref|ZP_03985026.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis HH22]
gi|229546713|ref|ZP_04435438.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX1322]
gi|229548806|ref|ZP_04437531.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis ATCC 29200]
gi|255971322|ref|ZP_05421908.1| queuosine biosynthesis protein [Enterococcus faecalis T1]
gi|255973941|ref|ZP_05424527.1| queuosine biosynthesis protein [Enterococcus faecalis T2]
gi|256617740|ref|ZP_05474586.1| queuosine biosynthesis protein [Enterococcus faecalis ATCC 4200]
gi|256761626|ref|ZP_05502206.1| queuosine biosynthesis protein [Enterococcus faecalis T3]
gi|256854284|ref|ZP_05559648.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis T8]
gi|256957271|ref|ZP_05561442.1| queuosine biosynthesis protein [Enterococcus faecalis DS5]
gi|256959995|ref|ZP_05564166.1| queuosine biosynthesis protein [Enterococcus faecalis Merz96]
gi|256964309|ref|ZP_05568480.1| queuosine biosynthesis protein [Enterococcus faecalis HIP11704]
gi|257077755|ref|ZP_05572116.1| queuosine biosynthesis protein [Enterococcus faecalis JH1]
gi|257083784|ref|ZP_05578145.1| queuosine biosynthesis protein [Enterococcus faecalis Fly1]
gi|257086209|ref|ZP_05580570.1| queuosine biosynthesis protein [Enterococcus faecalis D6]
gi|257089281|ref|ZP_05583642.1| queuosine biosynthesis protein [Enterococcus faecalis CH188]
gi|257418465|ref|ZP_05595459.1| queuosine biosynthesis protein [Enterococcus faecalis T11]
gi|257421116|ref|ZP_05598106.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis X98]
gi|293383747|ref|ZP_06629654.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis R712]
gi|293388778|ref|ZP_06633271.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis S613]
gi|294781281|ref|ZP_06746627.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis PC1.1]
gi|307267946|ref|ZP_07549334.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX4248]
gi|307271868|ref|ZP_07553136.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0855]
gi|307277297|ref|ZP_07558399.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX2134]
gi|307278436|ref|ZP_07559511.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0860]
gi|307286677|ref|ZP_07566763.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0109]
gi|307292452|ref|ZP_07572306.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0411]
gi|312904428|ref|ZP_07763588.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0635]
gi|312907038|ref|ZP_07766034.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis DAPTO 512]
gi|312952863|ref|ZP_07771724.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0102]
gi|312978705|ref|ZP_07790432.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis DAPTO 516]
gi|46576997|sp|Q837H2|QUEA_ENTFA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|29342915|gb|AAO80679.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis V583]
gi|227072458|gb|EEI10421.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0104]
gi|227175888|gb|EEI56860.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis HH22]
gi|229306035|gb|EEN72031.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis ATCC 29200]
gi|229308173|gb|EEN74160.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX1322]
gi|255962340|gb|EET94816.1| queuosine biosynthesis protein [Enterococcus faecalis T1]
gi|255966813|gb|EET97435.1| queuosine biosynthesis protein [Enterococcus faecalis T2]
gi|256597267|gb|EEU16443.1| queuosine biosynthesis protein [Enterococcus faecalis ATCC 4200]
gi|256682877|gb|EEU22572.1| queuosine biosynthesis protein [Enterococcus faecalis T3]
gi|256709844|gb|EEU24888.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis T8]
gi|256947767|gb|EEU64399.1| queuosine biosynthesis protein [Enterococcus faecalis DS5]
gi|256950491|gb|EEU67123.1| queuosine biosynthesis protein [Enterococcus faecalis Merz96]
gi|256954805|gb|EEU71437.1| queuosine biosynthesis protein [Enterococcus faecalis HIP11704]
gi|256985785|gb|EEU73087.1| queuosine biosynthesis protein [Enterococcus faecalis JH1]
gi|256991814|gb|EEU79116.1| queuosine biosynthesis protein [Enterococcus faecalis Fly1]
gi|256994239|gb|EEU81541.1| queuosine biosynthesis protein [Enterococcus faecalis D6]
gi|256998093|gb|EEU84613.1| queuosine biosynthesis protein [Enterococcus faecalis CH188]
gi|257160293|gb|EEU90253.1| queuosine biosynthesis protein [Enterococcus faecalis T11]
gi|257162940|gb|EEU92900.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis X98]
gi|291078823|gb|EFE16187.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis R712]
gi|291081935|gb|EFE18898.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis S613]
gi|294451617|gb|EFG20073.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis PC1.1]
gi|295113928|emb|CBL32565.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Enterococcus sp. 7L76]
gi|306496483|gb|EFM66046.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0411]
gi|306502155|gb|EFM71439.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0109]
gi|306504942|gb|EFM74137.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0860]
gi|306506004|gb|EFM75172.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX2134]
gi|306511374|gb|EFM80376.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0855]
gi|306515587|gb|EFM84114.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX4248]
gi|310627023|gb|EFQ10306.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis DAPTO 512]
gi|310629166|gb|EFQ12449.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0102]
gi|310632255|gb|EFQ15538.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0635]
gi|311288412|gb|EFQ66968.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis DAPTO 516]
gi|315027055|gb|EFT38987.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX2137]
gi|315029030|gb|EFT40962.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX4000]
gi|315032349|gb|EFT44281.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0017]
gi|315034393|gb|EFT46325.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0027]
gi|315148027|gb|EFT92043.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX4244]
gi|315149629|gb|EFT93645.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0012]
gi|315153155|gb|EFT97171.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0031]
gi|315155173|gb|EFT99189.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0043]
gi|315157708|gb|EFU01725.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0312]
gi|315165057|gb|EFU09074.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX1302]
gi|315167869|gb|EFU11886.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX1341]
gi|315171772|gb|EFU15789.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX1342]
gi|315174888|gb|EFU18905.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX1346]
gi|315574093|gb|EFU86284.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0309B]
gi|315577222|gb|EFU89413.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0630]
gi|315581758|gb|EFU93949.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0309A]
gi|323480051|gb|ADX79490.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis 62]
gi|327534451|gb|AEA93285.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis OG1RF]
Length = 343
Score = 266 bits (680), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 155/353 (43%), Positives = 210/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++FDFDLP IA P+ R S+RL+VV+ + D D+ L DA+V
Sbjct: 2 LSTEDFDFDLPEELIAQTPLKDRASSRLLVVNKETGD---MEDKHFHDILDELQPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L ++W +P+K K G + F
Sbjct: 59 MNNTRVLPARLYGEK----PETGGHLEVLLLTNTEGDTWETLIKPAKRAKVGTEIQF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A V ++ G ++ F GI LE SL G +PLPPYI K +D D Y
Sbjct: 112 -GDGRLKAVVKEELEHGGRIIEFKYDGIFLEILESL-GEMPLPPYI--KERLDDPDR--Y 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GS AAPTAGLHFT LL + + G+ + ++TLHVG GTF PV V++ ++H M
Sbjct: 166 QTVYAEENGSAAAPTAGLHFTKELLEEIKAKGVHLVYLTLHVGLGTFRPVSVDNIEEHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A+ LN V+ GGRIV+VGTTS+R LET T+ +G I SG+T+IFITP
Sbjct: 226 HSEFYRLTEEAAKQLNEVRQAGGRIVAVGTTSIRTLETIGTKFNGEIQADSGWTDIFITP 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY+F+ V+ +NFHLPKSTL+MLVSAF G + T YQHAI YRF+S+GD
Sbjct: 286 GYQFKVVEAFSTNFHLPKSTLVMLVSAFAGKDLTLAAYQHAIEEKYRFFSFGD 338
>gi|315641796|ref|ZP_07896800.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus italicus DSM 15952]
gi|315482471|gb|EFU73010.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus italicus DSM 15952]
Length = 343
Score = 266 bits (680), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 155/353 (43%), Positives = 210/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++FDFDLP IA P+ R S+RL+V+ ++D ++ LN+ DA+V
Sbjct: 2 LTTEDFDFDLPEELIAQTPLTDRASSRLLVLDRKTKE---MADKHFYEIIDELNAGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L GV+ + L ++W +P+K K G + F
Sbjct: 59 MNNTRVLPARLYGVK----EETGAHLELLLLNNTEGDTWETLIKPAKRAKVGTEITF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A V ++ + G ++ F GI LE SL G +PLPPYI + R Y
Sbjct: 112 -GDGRLKAIVEEELDHGGRMIRFVYEGIFLEILESL-GEMPLPPYIKERLEDPER----Y 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+ + ++TLHVG GTF PV V++ +H M
Sbjct: 166 QTVYAKENGSAAAPTAGLHFTKELLEKIQAKGVHLVYLTLHVGLGTFRPVSVDNIAEHEM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L +V+ GGRIV+VGTTS+R LET T+ DG I SG+TNIFI P
Sbjct: 226 HSEFYRLTQEAADELTAVRDAGGRIVAVGTTSIRTLETIGTKFDGAIQADSGWTNIFIKP 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY+F+ VD +NFHLPKSTL+MLVSAF G E + YQHAI YRF+S+GD
Sbjct: 286 GYQFKLVDAFSTNFHLPKSTLVMLVSAFAGREFVLEAYQHAIDEKYRFFSFGD 338
>gi|218236041|ref|YP_002369227.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus B4264]
gi|228910254|ref|ZP_04074072.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis IBL 200]
gi|229048127|ref|ZP_04193698.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH676]
gi|229111890|ref|ZP_04241436.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock1-15]
gi|296504909|ref|YP_003666609.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis BMB171]
gi|226736732|sp|B7HE52|QUEA_BACC4 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|218163998|gb|ACK63990.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus B4264]
gi|228671646|gb|EEL26944.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock1-15]
gi|228723230|gb|EEL74604.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH676]
gi|228849418|gb|EEM94254.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis IBL 200]
gi|296325961|gb|ADH08889.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis BMB171]
Length = 350
Score = 266 bits (680), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 151/353 (42%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEDRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVQLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGD 337
>gi|52141088|ref|YP_085741.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus E33L]
gi|81686089|sp|Q634C6|QUEA_BACCZ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|51974557|gb|AAU16107.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queuosine
biosynthesis protein queA) [Bacillus cereus E33L]
Length = 350
Score = 266 bits (680), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 151/353 (42%), Positives = 208/353 (58%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLQGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVELAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGD 337
>gi|30022493|ref|NP_834124.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus ATCC 14579]
gi|229129698|ref|ZP_04258666.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus BDRD-Cer4]
gi|38372443|sp|Q817W5|QUEA_BACCR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|29898051|gb|AAP11325.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus ATCC 14579]
gi|228653815|gb|EEL09685.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus BDRD-Cer4]
Length = 350
Score = 266 bits (680), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 151/353 (42%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEDRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVQLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKQNGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGD 337
>gi|309388952|gb|ADO76832.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Halanaerobium praevalens DSM 2228]
Length = 347
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 150/362 (41%), Positives = 213/362 (58%), Gaps = 19/362 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V+EF++ LP IA +P+ RD +RLMV++P +I +++ +L +L+ D I+
Sbjct: 1 MKVEEFNYQLPEELIAQKPLSKRDESRLMVLNPEQQ---IIEENIFKNLKEYLDPGDMII 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN++VI A+L G + I L +S W V RP + KKG + F
Sbjct: 58 MNNSRVIPARLYGAKIPTGTE----IELLLLNELSEGRWEVLVRPGRRAKKGVKIKF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSI--SGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
Q LEA V++ + G ++ FS E ++ +G +PLPPYI K R
Sbjct: 111 --QDILEAEVVEYTDFGGRIVEFSWDHKKYNFEEVLNQLGEMPLPPYINEKLDDPER--- 165
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y+K +GS AAPTAGLHFT +LL L GI + ++TLHVG GTF PVK E+ ++H
Sbjct: 166 -YQTVYSKKRGSAAAPTAGLHFTDSLLKELEEYGIILDYITLHVGLGTFRPVKSENIEEH 224
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH E I A TA + VK++G ++V+VGTT R LE+A +G ++ + G+T+IFI
Sbjct: 225 EMHEEYAEISAETAAKIKKVKTQGNKVVAVGTTVTRTLESAAA-NGELSEYQGWTDIFIY 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY F+ +D L++NFHLPKSTLLMLVSA G E YQ A+ YRF+S GD L+
Sbjct: 284 PGYEFKVIDSLITNFHLPKSTLLMLVSALAGKELVLSAYQKAVEKEYRFFSLGDAMLILN 343
Query: 359 KR 360
++
Sbjct: 344 RK 345
>gi|148985629|ref|ZP_01818783.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP3-BS71]
gi|148993024|ref|ZP_01822618.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP9-BS68]
gi|168489581|ref|ZP_02713780.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP195]
gi|147922110|gb|EDK73232.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP3-BS71]
gi|147928225|gb|EDK79242.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP9-BS68]
gi|183571952|gb|EDT92480.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP195]
gi|301800281|emb|CBW32901.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae OXC141]
gi|332073723|gb|EGI84202.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae GA17570]
Length = 342
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 209/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETGE---MQDKHFHSIINMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLEVLESL-GEMPLPPYIHEK--LDDRE--RY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKKNGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y H+I YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHSIQEHYRFFSFGDAMFIY 342
>gi|228981109|ref|ZP_04141410.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis Bt407]
gi|228778650|gb|EEM26916.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis Bt407]
gi|326942199|gb|AEA18095.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar chinensis CT-43]
Length = 350
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 151/353 (42%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEDRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVQLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETATLLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGD 337
>gi|257866741|ref|ZP_05646394.1| queuosine biosynthesis protein [Enterococcus casseliflavus EC30]
gi|257872742|ref|ZP_05652395.1| queuosine biosynthesis protein [Enterococcus casseliflavus EC10]
gi|257800699|gb|EEV29727.1| queuosine biosynthesis protein [Enterococcus casseliflavus EC30]
gi|257806906|gb|EEV35728.1| queuosine biosynthesis protein [Enterococcus casseliflavus EC10]
Length = 343
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 155/357 (43%), Positives = 210/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++FDFDLP IA P+ R S+RL+VV D ++ L DA+V
Sbjct: 2 LTTEDFDFDLPEELIAQTPLSDRSSSRLLVVDRETGK---FEDKHFYNIIDELAPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A++ G + + L + ++W +P+K K G + F
Sbjct: 59 MNDTRVLPARIYGEK----QETGAHLEILLLNNIEGDTWETLIKPAKRAKVGTKITF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RLEA V ++ + G ++ F GI LE SL G +PLPPYI + D Y
Sbjct: 112 -GDGRLEAVVEEELDHGGRIIRFQYKGIFLEILESL-GEMPLPPYIKER----LEDPDRY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ DH M
Sbjct: 166 QTVYAKENGSAAAPTAGLHFTPELLEQIAAKGVKLVYLTLHVGLGTFRPVSVDNIADHEM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A LN V++ GG+IV+VGTTS+R LET T+ DG I SG+T+IFITP
Sbjct: 226 HSEFYRLTEEAAAQLNEVRANGGKIVAVGTTSIRTLETIGTKFDGQIKADSGWTSIFITP 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ V+ +NFHLPKSTL+MLVSAF G + T YQHAI YRF+S+GD L
Sbjct: 286 GYQFKIVEAFSTNFHLPKSTLVMLVSAFAGRDLTLSAYQHAIDERYRFFSFGDAMFL 342
>gi|15901270|ref|NP_345874.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae TIGR4]
gi|111658609|ref|ZP_01409266.1| hypothetical protein SpneT_02000284 [Streptococcus pneumoniae
TIGR4]
gi|225860804|ref|YP_002742313.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae Taiwan19F-14]
gi|298229585|ref|ZP_06963266.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae str. Canada MDR_19F]
gi|298255442|ref|ZP_06979028.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae str. Canada MDR_19A]
gi|298502633|ref|YP_003724573.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae TCH8431/19A]
gi|21263901|sp|Q97Q15|QUEA_STRPN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|14972905|gb|AAK75514.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae TIGR4]
gi|225726590|gb|ACO22441.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae Taiwan19F-14]
gi|298238228|gb|ADI69359.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae TCH8431/19A]
Length = 342
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 154/358 (43%), Positives = 210/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ H + D+ L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETGEMQDKHFHSIIDM---LEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLEVLESL-GEMPLPPYIHEK--LDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKKNGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y H+I YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHSIQEHYRFFSFGDAMFIY 342
>gi|261405411|ref|YP_003241652.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Paenibacillus sp. Y412MC10]
gi|261281874|gb|ACX63845.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Paenibacillus sp. Y412MC10]
Length = 343
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 149/359 (41%), Positives = 210/359 (58%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +DF+LP IA P+ R S+RL+ ++ IS +D+ LN D +V
Sbjct: 1 MNVDLYDFELPEHLIAQTPLLDRSSSRLLTLNKKSGQ---ISHQTFADIIDSLNPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + + E L + + W +P K +KKG+++ F
Sbjct: 58 LNDTKVIPARLFGEKEDTGAKAE----VLLLKNMGEDRWEALVKPGKKLKKGNVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L+A + ++ G L FS GI + + +G +PLPPYI K +D RD Y
Sbjct: 111 -GDGKLKAVIEEEGEMGARTLSFSYKGI-FQEILDELGQMPLPPYIKEK--LDDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ + G+ + F+TLHVG GTF P+ V+ +DH+M
Sbjct: 165 QTVYAKHEGSAAAPTAGLHFTEALLEQIRAKGVDIAFITLHVGLGTFRPMSVDQVEDHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE--DGIINPWSGFTNIFIT 298
H E + TA LN K RGGR+++VGTTS R LET ++ ++ SG+T+IFI
Sbjct: 225 HEEYYSLSQETADLLNETKRRGGRVIAVGTTSCRTLETVGSQLKGEPLHESSGWTSIFIY 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY F VD L++NFHLPKSTL+MLVSA G E Y+ A+ YRF+S+GD ++
Sbjct: 285 PGYSFTVVDALITNFHLPKSTLVMLVSALAGREHIMHAYKEAVDKEYRFFSFGDAMFIY 343
>gi|322385861|ref|ZP_08059504.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus cristatus ATCC 51100]
gi|321270146|gb|EFX53063.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus cristatus ATCC 51100]
Length = 342
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 153/353 (43%), Positives = 210/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RDS+RL++V SD ++ L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDSSRLLIVDRETGQ---FSDQHFDNIIDQLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGTK----PETGGHVELLLLKNTQGDFWEVLAKPAKRLRVGTRVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV ++ G ++ F GI LE SL G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVTEELEHGGRIVRFDYQGIFLEVLESL-GEMPLPPYIHEK----LEDRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ ++H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLDKIAAKGVKLVYLTLHVGLGTFRPVSVDNLEEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A+ L VK+ G RI++VGTTS+R LET ++ +G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAETLRQVKASGHRIIAVGTTSIRTLETIGSKFEGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY+++ VD +NFHLPKSTL+MLVSAF G + T + Y++AI+ YRF+S+GD
Sbjct: 285 GYQWKIVDAFSTNFHLPKSTLVMLVSAFAGRQLTLEAYEYAIAERYRFFSFGD 337
>gi|114326953|ref|YP_744110.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Granulibacter bethesdensis CGDNIH1]
gi|114315127|gb|ABI61187.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Granulibacter bethesdensis CGDNIH1]
Length = 361
Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 155/361 (42%), Positives = 212/361 (58%), Gaps = 22/361 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +F FDLPP RIA P PR+SARL+ V + DH + DLP L D +V N
Sbjct: 8 IADFTFDLPPERIAHEPARPRESARLLHVPAGEEG---VHDHHIRDLPDLLRPGDVLVAN 64
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+VI AQL R + I TL+ + SW V AR ++ ++ GD L F D
Sbjct: 65 DTRVIPAQLTAWRG------QARIGLTLNRPLPDGSWHVLARNARRLRAGDRLRFTEHDT 118
Query: 123 QSR-------LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
QS L A V+ + G +L F + + ++ G + LPPYI R + A+
Sbjct: 119 QSTHTQPTGMLAAEVVARDEDGGAILRFVAE--DFDAALAQYGALALPPYIDRPQGPTAQ 176
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D DYQT +A+ +G+VAAPTAGLHFT LL RL + GI+ +TLHVGAGTF+P++ +
Sbjct: 177 DAKDYQTVFARHRGAVAAPTAGLHFTPALLDRLAAKGIERVTITLHVGAGTFLPMRDDTI 236
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+ H +H+E G I A +N+ K R+++VGTTSLRLLE+A G + P+ T+I
Sbjct: 237 EAHRLHAERGVITPEAASRINAAK----RVIAVGTTSLRLLESAADAAGGVRPFDAETDI 292
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PG+RFR L++NFHLP+STL MLV AF G + Y +AI+ AYRFYSYGD L
Sbjct: 293 FIKPGHRFRTAHALLTNFHLPRSTLFMLVCAFAGTARMRAAYAYAIAEAYRFYSYGDACL 352
Query: 356 L 356
+
Sbjct: 353 I 353
>gi|15892206|ref|NP_359920.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
conorii str. Malish 7]
gi|21263890|sp|Q92IY7|QUEA_RICCN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|15619340|gb|AAL02821.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
conorii str. Malish 7]
Length = 365
Score = 266 bits (679), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 147/387 (37%), Positives = 228/387 (58%), Gaps = 50/387 (12%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA P RD++ L++ ++ P+ + + D +L D +V
Sbjct: 1 MKLSDFDFDLPSELIAQYPSSERDNSDLLIA---VTPPIKTKFYNIID---YLKEGDLLV 54
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KVI A+LN K I+ L+ ++S ++WS +A+P++ + D +F +
Sbjct: 55 FNNSKVIKAKLN---------LGKNITINLNQKLSDDNWSAFAKPARKLHVNDEFYFDNH 105
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI-------- 172
+ + +K GEI + F ++ I + ++ G +PLP YI R +
Sbjct: 106 ------KVIITEKLAMGEIKVKFELNDISVFEFLNKYGEMPLPVYIRRSHSLCHPVATTT 159
Query: 173 DARDYVD--------------------YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIG 212
++ Y++ YQT Y++I+GSVAAPTAGLHFT ++L +L + G
Sbjct: 160 GSKTYLNNDWIPWSNHGMTNTQNDNDRYQTVYSQIEGSVAAPTAGLHFTKDILDKLKAEG 219
Query: 213 IKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTS 272
I+ F+TLHVGAGTF+PVK E+ +H MH+E I TA+ +N K G RI++VGTT+
Sbjct: 220 IQATFLTLHVGAGTFLPVKTENIHEHKMHTEYCSITPDTAEIINKAKQEGKRIIAVGTTT 279
Query: 273 LRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEE 332
LR LE++ +GI+ S T+IFITPG++F+ D+L++NFH PKSTL ML+ AF G +E
Sbjct: 280 LRTLESSCN-NGIVKAGSFKTDIFITPGFKFQTADMLLTNFHFPKSTLFMLICAFAGFKE 338
Query: 333 TKKMYQHAISHAYRFYSYGDTSLLFQK 359
++Y++AI A RF+SYGD +LL +K
Sbjct: 339 MHELYKYAIKEAMRFFSYGDATLLCRK 365
>gi|269215268|ref|ZP_05988032.2| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
lactamica ATCC 23970]
gi|269207922|gb|EEZ74377.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
lactamica ATCC 23970]
Length = 356
Score = 266 bits (679), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 209/356 (58%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P++S + D + DLP ++ + D +V
Sbjct: 11 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPDMS----LQDRVFGDLPDYVEAGDVLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 67 FNNTKVMKARLFGQKDSG-----GRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 119 --EGGIRAVMVGR--EGELFCLRFEGGQTVYELLEQNGHLPLPPYI--ERAADADDDSRY 172
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+VE ++H M
Sbjct: 173 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVEKIEEHKM 232
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + T A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 233 HSEWFEVPSETVTAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 292
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF VD L++NFHLPKSTLLMLVSAF G+ + Y++A+ YRF+SYGD +L
Sbjct: 293 YRFNVVDRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGDAMIL 348
>gi|229019642|ref|ZP_04176452.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH1273]
gi|229025880|ref|ZP_04182276.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH1272]
gi|228735432|gb|EEL86031.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH1272]
gi|228741645|gb|EEL91835.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH1273]
Length = 350
Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 151/353 (42%), Positives = 210/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEDRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + ++W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDTWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVQLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAVLLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFSNRDNVLHAYNEAVKEKYRFFSFGD 337
>gi|228475167|ref|ZP_04059893.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus hominis SK119]
gi|314936247|ref|ZP_07843594.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus hominis subsp. hominis C80]
gi|228270778|gb|EEK12180.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus hominis SK119]
gi|313654866|gb|EFS18611.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus hominis subsp. hominis C80]
Length = 341
Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 150/356 (42%), Positives = 208/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V+EFD+ LP S IA P+ RD +RL+V+ I+ +D+ + + D +V
Sbjct: 1 MNVEEFDYHLPESLIAQTPLKNRDQSRLLVLGRKTGN---IAHKHFTDIMDYFETGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + R+ N W V +P+K IK G+ L F
Sbjct: 58 LNDTRVMPARLFGLK----EETGAKVEMLMLTRIEDNDWEVLLKPAKRIKVGNTLSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++ A I + G ++ GI LE ++ +G +PLPPYI K +D D Y
Sbjct: 111 -GNGKIIAECIKELEQGGRIMRLHFEGI-LEERLDELGEMPLPPYI--KERLDDPDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ G+ + F+TLHVG GTF PV VED +DH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTDELLQKIKDKGVNIAFITLHVGLGTFRPVSVEDINDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN K G RI+SVGTTS R LET + SG+T+IFI PG
Sbjct: 225 HSEYYQMTKETADILNKTKENGHRIISVGTTSTRTLETIRRDHEQFVATSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ ++A+D L++NFHLPKSTL+MLVSAF E Y+ A+ YRF+S+GD L+
Sbjct: 285 FEYKAIDGLITNFHLPKSTLVMLVSAFSSREYILNAYKEAVKLKYRFFSFGDAMLI 340
>gi|34580774|ref|ZP_00142254.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
sibirica 246]
gi|28262159|gb|EAA25663.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
sibirica 246]
Length = 365
Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 148/387 (38%), Positives = 227/387 (58%), Gaps = 50/387 (12%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA P RD++ L++ ++ P+ + + D +L D +V
Sbjct: 1 MKLSDFDFDLPSELIAQYPSSERDNSDLLIA---VTPPIKTKFYNIID---YLKEGDLLV 54
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KVI A+LN K I+ L+ ++S +SWS +A+P++ + D +F +
Sbjct: 55 FNNSKVIKAKLN---------LGKNITINLNQKLSDDSWSAFAKPARKLHVNDEFYFDNH 105
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI-------- 172
+ + +K GEI + F ++ I + ++ G +PLP YI R +
Sbjct: 106 ------KVIITEKLAMGEIKVKFELNDISVFEFLNKYGEMPLPVYIRRSHSLCHPVATTT 159
Query: 173 DARDYVD--------------------YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIG 212
++ Y++ YQT Y++I+GSVAAPTAGLHFT ++L +L + G
Sbjct: 160 GSKAYLNNDWIPWSNHGMTNTQNDNDRYQTVYSQIEGSVAAPTAGLHFTKDILDKLKAEG 219
Query: 213 IKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTS 272
I+ F+TLHVGAGTF+PVK E+ +H MH+E I TA +N K G RI++VGTT+
Sbjct: 220 IQATFLTLHVGAGTFLPVKTENIHEHKMHTEYCSITPDTADIINKAKQEGKRIIAVGTTT 279
Query: 273 LRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEE 332
LR LE++ +GI+ S T+IFITPG++F+ D+L++NFH PKSTL ML+ AF G +E
Sbjct: 280 LRTLESSCN-NGIVKAGSFKTDIFITPGFKFQTADMLLTNFHFPKSTLFMLICAFAGFKE 338
Query: 333 TKKMYQHAISHAYRFYSYGDTSLLFQK 359
++Y++AI A RF+SYGD +LL +K
Sbjct: 339 MHELYKYAIKEAMRFFSYGDATLLCRK 365
>gi|307706877|ref|ZP_07643679.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus mitis SK321]
gi|307617750|gb|EFN96915.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus mitis SK321]
Length = 342
Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 154/358 (43%), Positives = 212/358 (59%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V N + +H S + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIV--NRETGEMQDNHFHS-IIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L + + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQK----EETGGHVELLLLKNTAGDEWEVLAKPAKRLKVGTRVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLEVLESL-GEMPLPPYIHEK--LDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK G R+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGSRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G + YQHAI+ YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRDLVLDAYQHAINERYRFFSFGDAMFIY 342
>gi|297584755|ref|YP_003700535.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Bacillus
selenitireducens MLS10]
gi|297143212|gb|ADH99969.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Bacillus
selenitireducens MLS10]
Length = 351
Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 150/356 (42%), Positives = 210/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FD++LP IA P+ R+ +RL+V+ +S S + LN DA+V
Sbjct: 1 MDVSAFDYELPEELIAQTPLKNREESRLLVMERTTGD---LSHQTFSSVIDHLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G++ +I L + W +P+K +KKG ++ F
Sbjct: 58 LNDTKVIPARLFGIK----KETGAKIEVLLLKEQDDHVWEALVKPAKRLKKGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L+A + G LL FS G+ ER + +G +PLPPYI + +D +D Y
Sbjct: 111 -GEGVLQAECTGELPEGRRLLRFSFDGVFHER-LDDLGEMPLPPYIQEQ--LDEKDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA +GS AAPTAGLHFT +LL ++ + GI+ F+TLHVG GTF PV V+ +DH M
Sbjct: 165 QTVYAANRGSAAAPTAGLHFTPDLLEKIRAKGIRTVFLTLHVGLGTFRPVSVDTVEDHTM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E +A+AL ++RGGRI++VGTTS R LET + SG+T+IFI PG
Sbjct: 225 HAEFYQFSEASARALRETRARGGRIIAVGTTSARTLETIVRDHDDFAAASGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF+ +D L++NFHLPKSTL+MLVSAF E Y+ A+ YRF+S+GD L+
Sbjct: 285 YRFQGIDGLLTNFHLPKSTLVMLVSAFSKREFVLDAYREAVRERYRFFSFGDAMLI 340
>gi|73662428|ref|YP_301209.1| S-adenosylmethionine tRNA ribosyltransferase [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
gi|91207328|sp|Q49Y78|QUEA_STAS1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|72494943|dbj|BAE18264.1| S-adenosylmethionine tRNA ribosyltransferase [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
Length = 341
Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 147/356 (41%), Positives = 211/356 (59%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++ FD+ LP + IA P+ RD +RL+++ I D+ +LN D +V
Sbjct: 1 MDIEAFDYHLPEALIAQTPLKNRDESRLLILGRQSGY---IEHKHFKDVTDYLNEGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L F
Sbjct: 58 LNDTRVMPARLFGMK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ ++ A I++ + G ++ GI L+ ++ +G +PLPPYI K +D D Y
Sbjct: 111 -GEGKIIAECIEELDQGGRIMRLHYDGI-LQERLDELGEMPLPPYI--KERLD--DQERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL R+ + G+ + F+TLHVG GTF PV V++ DDH M
Sbjct: 165 QTVYAKASGSAAAPTAGLHFTDELLERIKAQGVNIAFITLHVGLGTFRPVSVDNIDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D TA LNS + G RI+SVGTTS R LET SG+T+IFI PG
Sbjct: 225 HSEYYQMDEATANLLNSTRDNGNRIISVGTTSTRTLETIMQSSDRFVAKSGWTDIFIFPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ F+A+D L++NFHLPKSTL+MLVSAF + Y A++ YRF+S+GD L+
Sbjct: 285 FNFKAIDGLITNFHLPKSTLVMLVSAFSSRDYIINAYNQAVASEYRFFSFGDAMLI 340
>gi|229071926|ref|ZP_04205137.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus F65185]
gi|228711222|gb|EEL63186.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus F65185]
Length = 350
Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 151/353 (42%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVQLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNAAVKEKYRFFSFGD 337
>gi|300859629|ref|ZP_07105717.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TUSoD Ef11]
gi|300850447|gb|EFK78196.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TUSoD Ef11]
gi|315145163|gb|EFT89179.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX2141]
gi|315163072|gb|EFU07089.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0645]
Length = 343
Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 155/353 (43%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++FDFDLP IA P+ R S+RL+VV+ D D+ L DA+V
Sbjct: 2 LSTEDFDFDLPEELIAQTPLKDRASSRLLVVNKETGD---TEDKHFHDILDELQPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L ++W +P+K K G + F
Sbjct: 59 MNNTRVLPARLYGEK----PETGGHLEVLLLTNTEGDTWETLIKPAKRAKVGTEIQF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A V ++ G ++ F GI LE SL G +PLPPYI K +D D Y
Sbjct: 112 -GDGRLKAVVKEELEHGGRIIEFKYDGIFLEILESL-GEMPLPPYI--KERLDDPDR--Y 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GS AAPTAGLHFT LL + + G+ + ++TLHVG GTF PV V++ ++H M
Sbjct: 166 QTVYAEENGSAAAPTAGLHFTKELLEEIKAKGVHLVYLTLHVGLGTFRPVSVDNIEEHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A+ LN V+ GGRIV+VGTTS+R LET T+ +G I SG+T+IFITP
Sbjct: 226 HSEFYRLTEEAAKQLNEVRQAGGRIVAVGTTSIRTLETIGTKFNGEIQADSGWTDIFITP 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY+F+ V+ +NFHLPKSTL+MLVSAF G + T YQHAI YRF+S+GD
Sbjct: 286 GYQFKVVEAFSTNFHLPKSTLVMLVSAFAGKDLTLAAYQHAIEEKYRFFSFGD 338
>gi|220916512|ref|YP_002491816.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Anaeromyxobacter dehalogenans 2CP-1]
gi|254764262|sp|B8JH48|QUEA_ANAD2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|219954366|gb|ACL64750.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Anaeromyxobacter dehalogenans 2CP-1]
Length = 345
Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 156/359 (43%), Positives = 209/359 (58%), Gaps = 14/359 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP +A PV PRD++RLMV+ P P + +DLP L D +V
Sbjct: 1 MRLSDFDFALPEGLVAQAPVTPRDASRLMVLAPEEGSP---AHRGFADLPELLAPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + C W + SK I++G +L F
Sbjct: 58 FNDTRVIPARLLGHKAS--GGKVELLLCEPLEGGLGRRWRAMGQASKPIREGAVLTF--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DG LEA V D G + G ELE + G IPLPPYI +R DA D Y
Sbjct: 113 DG---LEARVDDVEGEGFYRVTLDRQGPELEAALGRAGRIPLPPYI--RRAPDAEDAARY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ GS AAPTAGLHFT LL+RL + GI+ VTLHVG GTF+P++ +D D H M
Sbjct: 168 QTIWARAPGSAAAPTAGLHFTEPLLARLAARGIRRTAVTLHVGPGTFLPIRGDDLDLHRM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A L + ++RGGRIV+VGTTS+R LE+A DG + G T +FI PG
Sbjct: 228 HGERYEVSPAAAAELAATRARGGRIVAVGTTSVRTLESA-WRDGAVAAGPGRTELFIRPG 286
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
+ F AVD +++NFHLP+STLL+LV AF G Y+ A++ YRF+SYGD LL ++
Sbjct: 287 HPFHAVDAMVTNFHLPRSTLLVLVCAFGGQGRVLAAYREAVARGYRFFSYGDAMLLLRR 345
>gi|295109865|emb|CBL23818.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Ruminococcus obeum A2-162]
Length = 341
Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 149/357 (41%), Positives = 204/357 (57%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R S+RL+ H ++ H +D+ +L D +V
Sbjct: 1 MKTSDFYYDLPKELIAQDPLEDRSSSRLL--HLSMEDGSFEHRHF-TDILDYLKEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G H I L R + W +P K + G + F
Sbjct: 58 INDTRVIPARLYG----HKEETGALIEILLLKRKENDIWECLVKPGKKARPGAKITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L +ID + G L+ F GI E + +G +PLPPYI K +D Y
Sbjct: 111 -GDGILTGEIIDIVDEGNRLIQFHYDGI-FEEILDQLGEMPLPPYITHK----LKDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT L+ ++ G+K+ VTLHVG GTF PVKV++ + H M
Sbjct: 165 QTVYAKNDGSAAAPTAGLHFTKELMKQVEEKGVKIAHVTLHVGLGTFRPVKVDNVESHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +N K GGR++SVGTTS R LE+AT E+GI++ SG+T IFI PG
Sbjct: 225 HSEFYMVEEDQAKLINDTKKNGGRVISVGTTSCRTLESATDENGILHAGSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ +D L++NFHLP+STLLMLVSA G E Y+ A+ YRF+S+GD L+
Sbjct: 285 YKFKMIDGLITNFHLPESTLLMLVSALAGKEHIMAAYEEAVKERYRFFSFGDAMLIL 341
>gi|210622017|ref|ZP_03292960.1| hypothetical protein CLOHIR_00906 [Clostridium hiranonis DSM 13275]
gi|210154462|gb|EEA85468.1| hypothetical protein CLOHIR_00906 [Clostridium hiranonis DSM 13275]
Length = 350
Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 145/352 (41%), Positives = 198/352 (56%), Gaps = 16/352 (4%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+F+FDLP IA P+ R ++RLMV+ I + D+ +L D +V N+T
Sbjct: 14 DFNFDLPQELIAQTPIEDRSASRLMVLDKETG---EIEHKIFRDIKEYLKPGDCLVLNDT 70
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQS 124
+VI A+L G + + I L R + ++W +P K K G F G
Sbjct: 71 RVIPARLIGEKVDTGGK----IEFLLLKRNTDDTWESLVKPGKRAKIGTKFSF----GGG 122
Query: 125 RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTY 184
+L V+ + G ++ F GI E + +G +PLPPYI K R YQT Y
Sbjct: 123 KLIGEVVGMADEGARIIKFHYDGI-FEEILDELGNMPLPPYITEKLEEKER----YQTVY 177
Query: 185 AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEI 244
+K GS AAPTAGLHFT+ LL + +G+ + FVTLHVG GTF PVKV+D +H MHSE
Sbjct: 178 SKHNGSAAAPTAGLHFTNELLEEIKEMGVDIAFVTLHVGLGTFRPVKVDDVLNHEMHSEF 237
Query: 245 GFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFR 304
+ A +N K G R++ VGTTS R +E+A EDG + SG+TNIFI PGY+F+
Sbjct: 238 YMVTQEAADKINKAKENGNRVICVGTTSCRTIESAAEEDGHMTAKSGWTNIFIYPGYKFK 297
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+D L++NFHLP+STL+MLVSA CG E Y AI YRF+S+GD +
Sbjct: 298 VLDNLITNFHLPESTLIMLVSALCGREHVLNAYNEAIKERYRFFSFGDAMFI 349
>gi|322377318|ref|ZP_08051809.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sp. M334]
gi|321281518|gb|EFX58527.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sp. M334]
Length = 342
Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 210/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ H + D+ L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETGKMQDKHFHSIIDM---LEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L + + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQK----EETGGHVELLLLKNTAGDEWEVLAKPAKRLKVGTRVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLEVLESL-GEMPLPPYIHEK--LDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VG+TS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAVTLRSVKENGGRVIAVGSTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|329926750|ref|ZP_08281158.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Paenibacillus sp. HGF5]
gi|328938950|gb|EGG35318.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Paenibacillus sp. HGF5]
Length = 343
Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 149/359 (41%), Positives = 209/359 (58%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +DF+LP IA P+ R S+RL+ ++ IS +D+ LN D +V
Sbjct: 1 MNVDLYDFELPEHLIAQTPLLDRSSSRLLTLNKESGQ---ISHQTFADIIDSLNPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + + E L + + W +P K +KKG+++ F
Sbjct: 58 LNDTKVIPARLFGEKEDTGAKAE----VLLLKNMGEDRWEALVKPGKKLKKGNVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L+A + ++ G L FS GI + + +G +PLPPYI K +D RD Y
Sbjct: 111 -GDGKLKAVIEEEGEMGARTLSFSYKGI-FQEILDELGQMPLPPYIKEK--LDDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ + G+ + F+TLHVG GTF P+ V+ +DH+M
Sbjct: 165 QTVYAKHEGSAAAPTAGLHFTEALLEQIRAKGVDIAFITLHVGLGTFRPMSVDQVEDHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE--DGIINPWSGFTNIFIT 298
H E + TA LN K RGGR+++VGTTS R LET ++ + SG+T+IFI
Sbjct: 225 HEEYYSLSQETADLLNETKRRGGRVIAVGTTSCRTLETVGSQLKGEPLRESSGWTSIFIY 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY F VD L++NFHLPKSTL+MLVSA G E Y+ A+ YRF+S+GD ++
Sbjct: 285 PGYSFTVVDALITNFHLPKSTLVMLVSALAGREHIMHAYKEAVDKEYRFFSFGDAMFIY 343
>gi|222097863|ref|YP_002531920.1| s-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Q1]
gi|254764266|sp|B9IYZ2|QUEA_BACCQ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|221241921|gb|ACM14631.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queuosine
biosynthesis protein queA) [Bacillus cereus Q1]
Length = 350
Score = 266 bits (679), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 151/353 (42%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDPGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVELAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGD 337
>gi|160880412|ref|YP_001559380.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Clostridium phytofermentans ISDg]
gi|189038516|sp|A9KK69|QUEA_CLOPH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|160429078|gb|ABX42641.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Clostridium phytofermentans ISDg]
Length = 364
Score = 265 bits (678), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 148/365 (40%), Positives = 202/365 (55%), Gaps = 21/365 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F FDLP IA P+ R +RL+V+ N ++ H+ ++ +L D +V
Sbjct: 1 MKKQDFYFDLPEELIAQDPLEDRSGSRLLVLDKNTG---KVTHHIFKEIVKYLKKGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCH---------INRREKEISCTLHMRVSPNSWSVYARPSKVIKK 111
NNTKVI A+L G R + I L R + W RP K K
Sbjct: 58 LNNTKVIPARLMGERIIEKTPLAPGHSYGKEGTPIELLLLKRKPDDVWETLVRPGKKAKV 117
Query: 112 GDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRP 171
G + F G +L +ID G L+ F+ GI E + +G +PLPPYI +
Sbjct: 118 GTKISF----GDGKLIGEIIDVVEEGNRLVKFTYQGI-FEEILDELGQMPLPPYITHELA 172
Query: 172 IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK 231
R YQT YAK +GS AAPTAGLHFT+ LL ++ +G+ + VTLHVG GTF PVK
Sbjct: 173 DKNR----YQTVYAKHEGSAAAPTAGLHFTNELLKQIEDMGVVIANVTLHVGLGTFRPVK 228
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSG 291
+D DH MHSE+ ++ A+ +N K GGRI+ VGTTS R +E+A EDG + SG
Sbjct: 229 EDDILDHHMHSEVYQVEESEAKKINDAKRAGGRIICVGTTSCRTIESAANEDGFVQAKSG 288
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T IFI PGY+F+ ++ L++NFHLP+STLLMLVSA E Y+ A+ YRF+S+G
Sbjct: 289 ATEIFIYPGYKFKVLNCLITNFHLPESTLLMLVSALASREHIIAAYEEAVKERYRFFSFG 348
Query: 352 DTSLL 356
D +
Sbjct: 349 DAMFI 353
>gi|313669079|ref|YP_004049363.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
lactamica ST-640]
gi|313006541|emb|CBN88005.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Neisseria lactamica 020-06]
Length = 346
Score = 265 bits (678), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 154/356 (43%), Positives = 208/356 (58%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P++ PL D + DLP ++ D +V
Sbjct: 1 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPDM--PL--QDRVFGDLPDYVGEGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDSG-----GRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 109 --EGGIRAVMVGR--EGELFCLCFEGGQTVYELLEQNGHLPLPPYI--ERAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+VE ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVEKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + T A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 223 HSEWFEVPSETVAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF D L++NFHLPKSTLLMLVSAF G+ + Y++A+ H YRF+SYGD +L
Sbjct: 283 YRFNVADRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEHEYRFFSYGDAMIL 338
>gi|194290672|ref|YP_002006579.1| s-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cupriavidus
taiwanensis LMG 19424]
gi|238692773|sp|B3R6J3|QUEA_CUPTR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|193224507|emb|CAQ70518.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cupriavidus
taiwanensis LMG 19424]
Length = 355
Score = 265 bits (678), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 154/363 (42%), Positives = 214/363 (58%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVH---PNLSCPLV-ISDHLVSDLPAFLNSN 56
+ + +FDF LPP IA + R ++RL+VV P + V ++D SD+ +L +
Sbjct: 2 LTLSDFDFPLPPELIAQSALPDRSASRLLVVERLAPGDTADAVHMADRAFSDIVDYLRPD 61
Query: 57 DAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
D +VFN+T+VI A RF ++ + + ++ R SK +G LH
Sbjct: 62 DLLVFNDTRVIKA-----RFFGHKPSGGKVEVLVERVLDTHTVLAQVRASKTPVEGSALH 116
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
+ D + +D++ T L F ++L I G +PLPPYI DA D
Sbjct: 117 L-ADDAFAVTVGPRVDQFFT----LRFPEPALDL---IERYGRLPLPPYITHD--PDAYD 166
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YA+ G+VAAPTAGLHF L +RL + G++ F+TLHVGAGTF PV+ E+
Sbjct: 167 ETRYQTVYARSPGAVAAPTAGLHFDDALFARLDAAGVRRAFLTLHVGAGTFQPVRTENLA 226
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+H MHSE I AQA+ ++RGGR+++VGTTSLR LE+A DG + SG T+IF
Sbjct: 227 EHKMHSEWYAISEDLAQAVRETRARGGRVIAVGTTSLRALESAAQPDGTLAAGSGDTDIF 286
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFR VD L++NFHLPKSTLLMLVSA G++ + Y+HA+ YRF+SYGD LL
Sbjct: 287 ITPGYRFRLVDALITNFHLPKSTLLMLVSALAGVQAIRAAYRHAVEQRYRFFSYGDAMLL 346
Query: 357 FQK 359
++
Sbjct: 347 TRQ 349
>gi|325567162|ref|ZP_08143829.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus casseliflavus ATCC 12755]
gi|325158595|gb|EGC70741.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus casseliflavus ATCC 12755]
Length = 343
Score = 265 bits (678), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 154/357 (43%), Positives = 210/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++FDF+LP IA P+ R S+RL+VV D ++ L DA+V
Sbjct: 2 LTTEDFDFELPEELIAQTPLSDRSSSRLLVVDRETGK---FEDKHFYNIIDELEPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A++ G + + L + ++W +P+K K G + F
Sbjct: 59 MNDTRVLPARIYGEK----QETGAHLEILLLNNIEGDTWETLIKPAKRAKVGTKITF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RLEA V ++ + G ++ F GI LE SL G +PLPPYI + D Y
Sbjct: 112 -GDGRLEAVVEEELDHGGRIIRFQYKGIFLEILESL-GEMPLPPYIKER----LEDPDRY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ DH M
Sbjct: 166 QTVYAKENGSAAAPTAGLHFTPELLEQIAAKGVKLVYLTLHVGLGTFRPVSVDNIADHEM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A LN V++ GG+IV+VGTTS+R LET T+ DG I SG+T+IFITP
Sbjct: 226 HSEFYRLTEEAAAQLNEVRANGGKIVAVGTTSIRTLETIGTKFDGQIKADSGWTSIFITP 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ V+ +NFHLPKSTL+MLVSAF G + T YQHAI YRF+S+GD L
Sbjct: 286 GYQFKIVEAFSTNFHLPKSTLVMLVSAFAGRDLTLSAYQHAIDERYRFFSFGDAMFL 342
>gi|229032069|ref|ZP_04188051.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH1271]
gi|228729261|gb|EEL80256.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH1271]
Length = 350
Score = 265 bits (678), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 151/353 (42%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEDRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + ++W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDTWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+ + F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVGLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKESGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGD 337
>gi|331085363|ref|ZP_08334449.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lachnospiraceae bacterium 9_1_43BFAA]
gi|330408146|gb|EGG87636.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lachnospiraceae bacterium 9_1_43BFAA]
Length = 341
Score = 265 bits (678), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 147/356 (41%), Positives = 204/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F+FDLP IA P+ R S+RL+V+ H+ ++ +L D +V
Sbjct: 1 MRKEDFNFDLPEELIAQDPLEDRSSSRLLVLDKETGK---TEHHVFREIIEYLEEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + + +I L R + W +P K K G + F
Sbjct: 58 INDTKVIPARLIGSKIG----TDAKIEVLLLKRKENDVWETLVKPGKKAKIGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L V+D G L+ F GI E + +G +PLPPYI + D Y
Sbjct: 111 -GDGLLVGEVVDIVEEGNRLIHFEYEGI-FEEILDRLGQMPLPPYITHQ----LEDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ G+++ VTLHVG GTF PVKV++ +H M
Sbjct: 165 QTVYAKHSGSAAAPTAGLHFTPELLKKIEEKGVQIARVTLHVGLGTFRPVKVDNILEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I+ A+ +N+ K+ G R+++VGTTS R +E+A EDG I P SG+T+IFI PG
Sbjct: 225 HSEFYQIEEEAAEKINTAKANGKRVIAVGTTSCRTIESAVKEDGTIAPVSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA G E Y+ AI YRF+S+GD +
Sbjct: 285 YQFKVLDCLITNFHLPESTLVMLVSALAGREHVLNAYEEAIKERYRFFSFGDAMFI 340
>gi|309379474|emb|CBX21840.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 346
Score = 265 bits (678), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 208/356 (58%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P++S + D + DLP ++ D +V
Sbjct: 1 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPDMS----LQDRVFGDLPDYVGEGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDSG-----GRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 109 --EGGIRAVMVGR--EGELFCLRFEGGETVYELLEQNGHLPLPPYI--ERAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+VE ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVEKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + T A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 223 HSEWFEVPSETVAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF VD L++NFHLPKSTLLMLVSAF G+ + Y++A+ YRF+SYGD +L
Sbjct: 283 YRFNVVDRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGDAMVL 338
>gi|229163366|ref|ZP_04291318.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus R309803]
gi|228620147|gb|EEK77021.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus R309803]
Length = 354
Score = 265 bits (678), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 150/353 (42%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLM++ I +D+ ++L+ D +V
Sbjct: 5 MDINLFDFHLPEELIAQVPLEERETSRLMMLDRETGD---IEHKHFTDILSYLHEGDCLV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 62 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 115 -GEGKLKATCTGMADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 169 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVELAFITLHVGLGTFRPVSADTIEEHHM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 229 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 289 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGD 341
>gi|168486111|ref|ZP_02710619.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae CDC1087-00]
gi|183570814|gb|EDT91342.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae CDC1087-00]
Length = 342
Score = 265 bits (678), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 154/358 (43%), Positives = 209/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ H + D+ L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETGEMQDKHFHSIIDM---LEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGSHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLEVLESL-GEMPLPPYIHEK--LDDRE--RY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFYGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGCELVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|238917266|ref|YP_002930783.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Eubacterium
eligens ATCC 27750]
gi|238872626|gb|ACR72336.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Eubacterium
eligens ATCC 27750]
Length = 343
Score = 265 bits (678), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 148/356 (41%), Positives = 205/356 (57%), Gaps = 14/356 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F +DLP IA P+ R S+RLMV+ I + D+ +L D +V
Sbjct: 1 MDLHDFYYDLPEELIAQDPLSDRSSSRLMVLDKETGE---IEHKIFRDIVDYLKPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + E+ + ++W V +P K K G + F
Sbjct: 58 VNDTKVIPARLIGTKAD--TGATIEVLLLKRLEDRQDTWEVLVKPGKKAKVGAKISF--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L +ID G L+ F+ GI E + +G +PLPPYI K D Y
Sbjct: 113 -GEGKLIGEIIDIVEEGNRLIQFTYDGI-FEEILDELGQMPLPPYITHK----LEDKNRY 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT+ LL ++ ++G+ + VTLHVG GTF PVKVE+ DH M
Sbjct: 167 QTVYAKHEGSAAAPTAGLHFTTELLEKIKAMGVNIARVTLHVGLGTFRPVKVENILDHHM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +N+ + GGR+++VGTTS R LE+ EDG I SG+T IFI PG
Sbjct: 227 HSEFYVVTQEAADMINNTRKNGGRVIAVGTTSTRTLESVALEDGTIPAKSGWTEIFIYPG 286
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+A+D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 287 YKFKAIDCLITNFHLPESTLVMLVSALAGREHVLHAYEVAVQEKYRFFSFGDAMFI 342
>gi|255658191|ref|ZP_05403600.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Mitsuokella
multacida DSM 20544]
gi|260849499|gb|EEX69506.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Mitsuokella
multacida DSM 20544]
Length = 368
Score = 265 bits (678), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 146/360 (40%), Positives = 206/360 (57%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M++ +FD+DLP RIA P+ PR+++RLMV+ P I DL FL D ++
Sbjct: 1 MLLSDFDYDLPEERIAQVPIEPRNASRLMVLDP---VTKEIEHRHFYDLKEFLEPGDTLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+V+ A+L G H ++ + L R+ N W +P K K G+++ F +
Sbjct: 58 FNDTRVMPARLIG----HRDQTGGRVEVFLLRRLDANHWETLVKPGKKAKPGNVIRFGDE 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L TV + + G ++ F GI E + +G PLPPYI K D Y
Sbjct: 114 -----LSCTVTEHTDFGGRIVEFHYDGI-FEEILDRLGETPLPPYIHEK----LEDKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + +GS AAPTAGLHFT + L +G+ + FVTLHVG GTF PV VE+ ++H M
Sbjct: 164 QTVYNREEGSAAAPTAGLHFTKEQMQELREMGVNLGFVTLHVGLGTFRPVNVENIEEHEM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I TA+ + K G R+++VGTTS+R LE+A T I SG+T IFI PG
Sbjct: 224 HKEYYCIPDETAKLIMDTKKAGHRVIAVGTTSIRTLESAATAKNEIAGKSGWTGIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
Y F+ VD +++NFHLPKSTL+ML+SAF G Y+ A+ YRF+S+GD + +K+
Sbjct: 284 YDFKIVDAIITNFHLPKSTLIMLISAFAGRNFVLNAYKTAVEMKYRFFSFGDAMFIRRKQ 343
>gi|229198546|ref|ZP_04325249.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus m1293]
gi|228584931|gb|EEK43046.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus m1293]
gi|324328321|gb|ADY23581.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar finitimus YBT-020]
Length = 350
Score = 265 bits (677), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 150/353 (42%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVELAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN V+ GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVRENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGD 337
>gi|325660922|ref|ZP_08149549.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lachnospiraceae bacterium 4_1_37FAA]
gi|325472429|gb|EGC75640.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lachnospiraceae bacterium 4_1_37FAA]
Length = 341
Score = 265 bits (677), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 147/356 (41%), Positives = 205/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F+FDLP IA P+ R S+RL+V+ H+ ++ +L + D +V
Sbjct: 1 MRKEDFNFDLPEELIAQDPLEDRSSSRLLVLDKETGK---TEHHVFREIIDYLEAGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + + +I L R + W +P K K G + F
Sbjct: 58 INDTKVIPARLIGSKIG----TDAKIEVLLLKRKENDVWETLVKPGKKAKIGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L V+D G L+ F GI E + +G +PLPPYI + D Y
Sbjct: 111 -GDGLLVGEVVDIVEEGNRLIHFEYEGI-FEEILDRLGQMPLPPYITHQ----LEDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ G+++ VTLHVG GTF PVKV++ +H M
Sbjct: 165 QTVYAKHSGSAAAPTAGLHFTPELLKKIEEKGVQIARVTLHVGLGTFRPVKVDNILEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I+ A+ +N+ K+ G R+++VGTTS R +E+A EDG I P SG+T+IFI PG
Sbjct: 225 HSEFYQIEEEAAEKINTAKANGKRVIAVGTTSCRTIESAAKEDGTIAPVSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA G E Y+ AI YRF+S+GD +
Sbjct: 285 YQFKVLDCLITNFHLPESTLVMLVSALAGREHVLNAYEEAIKERYRFFSFGDAMFI 340
>gi|228917055|ref|ZP_04080614.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
gi|228842583|gb|EEM87672.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
Length = 350
Score = 265 bits (677), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 150/353 (42%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGG---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYEGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVELAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT +G + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHNGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGD 337
>gi|332074997|gb|EGI85469.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae GA41301]
Length = 342
Score = 265 bits (677), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 210/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ H + D+ L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETGEMQDKHFHSIIDM---LEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLEVLESL-GEMPLPPYIHEK--LDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKKNGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVS+F G E Y H+I YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSSFAGRELVLDAYHHSIQEHYRFFSFGDAMFIY 342
>gi|149375025|ref|ZP_01892798.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Marinobacter algicola DG893]
gi|149360914|gb|EDM49365.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Marinobacter algicola DG893]
Length = 364
Score = 265 bits (677), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 153/361 (42%), Positives = 221/361 (61%), Gaps = 34/361 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHL-VSDLPAFLNSNDAI 59
M V +F FDLP IA P+ R ++RL+ + LS + HL +DLP+ L D +
Sbjct: 1 MNVSDFHFDLPDELIARYPLKERSASRLLSLD-GLSGDI---RHLRFTDLPSLLQPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREK--EISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
VFN+T+VI A+L G R+E ++ + + + + R SK +K+G +
Sbjct: 57 VFNDTRVIPARLFG-------RKETGGQVEVLVERVLGEHDILAHVRASKALKEGQKV-- 107
Query: 118 FSQDG-----QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
+DG R +A ++ E +L LER +G +PLPPY+ RP
Sbjct: 108 LLEDGTPLRMSGRDDALFHLHCDSDEPVLDV------LER----IGHMPLPPYV--DRPD 155
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D YQT YA+ G+VAAPTAGLHF +L+ L S+G++ FVTLHVGAGTF PV+V
Sbjct: 156 ESSDRERYQTVYAREAGAVAAPTAGLHFDDRILAELESMGVETAFVTLHVGAGTFQPVRV 215
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
E +DH+MHSE+ + T A+N+ ++RGGR+V+VGTTS+R LE+A + G++ P+ G
Sbjct: 216 EGIEDHVMHSEVAHVPQATVDAVNAARARGGRVVAVGTTSVRSLESA-SRGGVVRPFQGE 274
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFI PGYRF+ VD +++NFHLP+STL+MLVSAF G + YQ A++ YRF+SYGD
Sbjct: 275 TDIFIYPGYRFQTVDAMVTNFHLPESTLIMLVSAFAGYQNVMSAYQAAVAECYRFFSYGD 334
Query: 353 T 353
Sbjct: 335 A 335
>gi|290769980|gb|ADD61747.1| putative protein [uncultured organism]
Length = 343
Score = 265 bits (677), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 148/356 (41%), Positives = 205/356 (57%), Gaps = 14/356 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F +DLP IA P+ R S+RLMV+ I + D+ +L D +V
Sbjct: 1 MDLHDFYYDLPEELIAQDPLSDRSSSRLMVLDKETGE---IEHKIFRDIVDYLRPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + E+ + ++W V +P K K G + F
Sbjct: 58 VNDTKVIPARLIGTKAD--TGATIEVLLLKRLEDRQDTWEVLVKPGKKAKVGAKISF--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L +ID G L+ F+ GI E + +G +PLPPYI K D Y
Sbjct: 113 -GEGKLIGEIIDIVEEGNRLIQFTYDGI-FEEILDELGQMPLPPYITHK----LEDKNRY 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT+ LL ++ ++G+ + VTLHVG GTF PVKVE+ DH M
Sbjct: 167 QTVYAKHEGSAAAPTAGLHFTTELLEKIKAMGVNIARVTLHVGLGTFRPVKVENILDHHM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +N+ + GGR+++VGTTS R LE+ EDG I SG+T IFI PG
Sbjct: 227 HSEFYVVTQEAADMINNTRKNGGRVIAVGTTSTRTLESVALEDGTIPAKSGWTEIFIYPG 286
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+A+D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 287 YKFKAIDCLITNFHLPESTLVMLVSALAGREHVLHAYEVAVQEKYRFFSFGDAMFI 342
>gi|229586455|ref|YP_002844956.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
africae ESF-5]
gi|259551480|sp|C3PMQ3|QUEA_RICAE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|228021505|gb|ACP53213.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
africae ESF-5]
Length = 365
Score = 265 bits (677), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 147/387 (37%), Positives = 228/387 (58%), Gaps = 50/387 (12%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA P RD++ L++ ++ P+ + + D +L D +V
Sbjct: 1 MKLSDFDFDLPSELIAQYPSRERDNSDLLIA---VTPPIKTKFYNIID---YLKEGDLLV 54
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KVI A+LN + I+ L+ ++S +SWS +A+P++ + D +F +
Sbjct: 55 FNNSKVIKAKLN---------LGENITINLNQKLSDDSWSAFAKPARKLHVNDEFYFDNH 105
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI-------- 172
+ + +K GEI + F ++ I + ++ G +PLP YI R +
Sbjct: 106 ------KVIITEKLAMGEIKVKFELNDISVFEFLNKYGEMPLPVYIRRSHSLCHPVATTT 159
Query: 173 DARDYVD--------------------YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIG 212
++ Y++ YQT Y++I+GSVAAPTAGLHFT ++L +L + G
Sbjct: 160 GSKTYLNNDWIPWSNHGMTNTQNDNDRYQTVYSQIEGSVAAPTAGLHFTKDILDKLKAEG 219
Query: 213 IKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTS 272
I+ F+TLHVGAGTF+PVK E+ +H MH+E I TA+ +N K G RI++VGTT+
Sbjct: 220 IQATFLTLHVGAGTFLPVKTENIHEHKMHTEYCSITPDTAKIINKAKQEGKRIIAVGTTT 279
Query: 273 LRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEE 332
LR LE++ +GI+ S T+IFITPG++F+ D+L++NFH PKSTL ML+ AF G +E
Sbjct: 280 LRTLESSCN-NGIVKAGSFKTDIFITPGFKFQTADMLLTNFHFPKSTLFMLICAFAGFKE 338
Query: 333 TKKMYQHAISHAYRFYSYGDTSLLFQK 359
++Y++AI A RF+SYGD +LL +K
Sbjct: 339 MHELYKYAIKEAMRFFSYGDATLLCRK 365
>gi|117923911|ref|YP_864528.1| queuosine biosynthesis protein [Magnetococcus sp. MC-1]
gi|259551461|sp|A0L579|QUEA_MAGSM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|117607667|gb|ABK43122.1| Queuosine biosynthesis protein [Magnetococcus sp. MC-1]
Length = 363
Score = 265 bits (677), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 148/356 (41%), Positives = 208/356 (58%), Gaps = 17/356 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +D+DLP + IA RP+ PRD ARL+V S + D L L + D +V N
Sbjct: 14 LSHYDYDLPAAHIAQRPMEPRDHARLLV-----SRAQGVEDSRFDQLVEHLQAGDLLVLN 68
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKVI A+L G + + EI P W R +K +K G + F +D
Sbjct: 69 DTKVIPARLLGHK---PSGGRVEIFLLKPDPQHPPLWRAMTRSNKPLKVGQRVEF-GED- 123
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR-DYVDYQ 181
A ++++ G +L+ G+ L+ + G +PLPPYI+ DA+ D YQ
Sbjct: 124 ---FYAELVERQAEGHVLVALHAVGMGLDEAMQHYGQMPLPPYISGS---DAQQDKSRYQ 177
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A+ G+VAAPTAGLHFT L RL + G+ VTLHVG GTF PV+VED D H MH
Sbjct: 178 TVFARRDGAVAAPTAGLHFTDALFERLAAKGVTWCHVTLHVGLGTFQPVRVEDLDAHPMH 237
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E ++A + K+ GGR+V+VGTT++R LE++ + G++ G T +FI PGY
Sbjct: 238 GEWRQLEADAVAKIQRTKAAGGRVVAVGTTAVRTLESSVDDQGVLQASCGETRLFIRPGY 297
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
RF+ VD++++NFHLPKSTLLMLV+AF G ++ Y HA+ YRFYSYGDT+LL+
Sbjct: 298 RFKVVDLMLTNFHLPKSTLLMLVAAFVGRSRLRRDYAHAMGKNYRFYSYGDTTLLY 353
>gi|228954702|ref|ZP_04116725.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar kurstaki str. T03a001]
gi|228805029|gb|EEM51625.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar kurstaki str. T03a001]
Length = 350
Score = 265 bits (677), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 150/353 (42%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVQLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT +G + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHEGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGD 337
>gi|254724656|ref|ZP_05186439.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. A1055]
Length = 350
Score = 265 bits (677), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 150/353 (42%), Positives = 208/353 (58%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y K GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYGKEIGSAAAPTAGLHFTEELLEKLKQKGVELAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGD 337
>gi|295695631|ref|YP_003588869.1| S-adenosylmethionine/ tRNA-ribosyltransferase-isomerase [Bacillus
tusciae DSM 2912]
gi|295411233|gb|ADG05725.1| S-adenosylmethionine/ tRNA-ribosyltransferase-isomerase [Bacillus
tusciae DSM 2912]
Length = 346
Score = 265 bits (677), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 153/360 (42%), Positives = 210/360 (58%), Gaps = 22/360 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FD+DLPP RIA P R ++RL+V++ + + DL + DA++
Sbjct: 1 MRVEDFDYDLPPDRIAQVPSADRTASRLLVLYRDSGR---MEHRHFRDLVDYAVPGDALI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS----WSVYARPSKVIKKGDILH 116
N+T+VI A+L GV+ ++ C L R P W V +P + + G L
Sbjct: 58 LNDTRVIPARLLGVKAGGGG----QVECLLLRRDDPEQDPDLWRVLVKPGRRVHPGHRLV 113
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
F G LEA V+D G L+ F +G + E + +G +PLPPYI +R R
Sbjct: 114 F----GDGALEAEVLDTTEEGGRLVRFRYTG-DWEDLLKRLGEMPLPPYIKERRADSGR- 167
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YA++ GSVAAPTAGLHFT LL +L G++V +TLHVG GTF PV+V +
Sbjct: 168 ---YQTVYARVPGSVAAPTAGLHFTEELLEQLRDRGMEVGTITLHVGLGTFRPVQVARVE 224
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+H MH+E I + TA+ ++ V+ RGGRI +VGTT R LE+A P G+T++F
Sbjct: 225 EHHMHAEYFRIPSETAELVSRVRERGGRIWAVGTTVCRALESAALRG--WGPREGWTDLF 282
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PG+ FR VD L++NFHLPKSTLLMLVSA G E+ YQ AI YRF+S+GD L+
Sbjct: 283 IYPGFSFRVVDRLITNFHLPKSTLLMLVSALAGREQILGAYQEAIEKGYRFFSFGDAMLI 342
>gi|229081682|ref|ZP_04214177.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock4-2]
gi|229152621|ref|ZP_04280810.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus m1550]
gi|228630882|gb|EEK87522.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus m1550]
gi|228701686|gb|EEL54177.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock4-2]
Length = 354
Score = 265 bits (677), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 150/353 (42%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 5 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 62 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 115 -GEGKLKATCTGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 169 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVQLAFITLHVGLGTFRPVSADTIEEHHM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT +G + SG+T+IF+ P
Sbjct: 229 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHEGKLCAASGWTDIFMYP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 289 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGD 341
>gi|118479574|ref|YP_896725.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis str. Al Hakam]
gi|118418799|gb|ABK87218.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis str. Al Hakam]
Length = 354
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 150/353 (42%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 5 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 62 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 115 -GEGKLKATCTGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 169 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVELAFITLHVGLGTFRPVSADTIEEHHM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT +G + SG+T+IF+ P
Sbjct: 229 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHNGKLCAASGWTDIFMYP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 289 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGD 341
>gi|220935237|ref|YP_002514136.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Thioalkalivibrio sp. HL-EbGR7]
gi|254764288|sp|B8GTQ5|QUEA_THISH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|219996547|gb|ACL73149.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Thioalkalivibrio sp. HL-EbGR7]
Length = 364
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 146/356 (41%), Positives = 215/356 (60%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F ++LPP IA RP+ R ++RL+ + + ++D DLP LN D +V
Sbjct: 1 MRLSDFHYELPPELIAQRPLAERSASRLLCLDRDTGA---LADRRFRDLPDLLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L GV+ R E + L + + R SK +G +L
Sbjct: 58 FNDTRVIPARLLGVKRDTGGRVEVLVERVL----DEHRVLAHVRASKSPGEGVVLWL--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ LEA V + G++ ++ + + + G +PLPPYI +RP A D Y
Sbjct: 111 --EEALEAVV--EGREGDLFCLWFAGDLPVIELLERHGHMPLPPYI--ERPDAAEDRDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A G+VAAPTAGLHF +++++R+ + G++ VTLHVGAGTF PV+VED H+M
Sbjct: 165 QTVFASRPGAVAAPTAGLHFDADIMARMRARGVETAAVTLHVGAGTFQPVRVEDVSRHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + + + ++RGGR+V+VGTT++R LE+A DG + P+SG T +FITPG
Sbjct: 225 HAEWTEVSTQVCDQVAACRARGGRVVAVGTTAVRSLESAAA-DGELKPFSGDTRLFITPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y FR VD L++NFHLP+STLLMLVSAF G E + Y+HA++ YRF+SYGD +
Sbjct: 284 YTFRVVDALVTNFHLPESTLLMLVSAFAGYEPVMQAYRHAVAERYRFFSYGDAMFI 339
>gi|228923170|ref|ZP_04086461.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
gi|228836549|gb|EEM81899.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
Length = 350
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 150/353 (42%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEDRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVQLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT +G + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHEGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGD 337
>gi|229175092|ref|ZP_04302609.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus MM3]
gi|228608388|gb|EEK65693.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus MM3]
Length = 350
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 151/353 (42%), Positives = 208/353 (58%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEDRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 111 -GEGKLKATCTGTADQGGRHLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+ + F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVGLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGD 337
>gi|168483957|ref|ZP_02708909.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae CDC1873-00]
gi|172042767|gb|EDT50813.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae CDC1873-00]
Length = 342
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 154/358 (43%), Positives = 209/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ H + D+ L DA+V
Sbjct: 1 MNTADFDFHLPEGLIAQTPLEKRDASKLLIVNRETGEMQDKHFHSIIDM---LEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGSHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F I LE SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQRIFLEVLESL-GEMPLPPYIHEK--LDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|312901590|ref|ZP_07760862.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0470]
gi|311291311|gb|EFQ69867.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0470]
Length = 343
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 154/353 (43%), Positives = 210/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++FDFDLP IA P+ R S+RL+VV+ + D D+ L DA+V
Sbjct: 2 LSTEDFDFDLPEELIAQTPLKDRASSRLLVVNKETGD---MEDKHFHDILDELQPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L ++W +P+K K G + F
Sbjct: 59 MNNTRVLPARLYGEK----PETGGHLEVLLLTNTEGDTWETLIKPAKRAKVGTEIQF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A V ++ G ++ F GI LE SL G +PLPPYI K +D D Y
Sbjct: 112 -GDGRLKAVVKEELEHGGRIIEFKYDGIFLEILESL-GEMPLPPYI--KERLDDPDR--Y 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GS AAPTAGLHFT LL + + G+ + ++TLHVG GTF PV V++ ++H M
Sbjct: 166 QTVYAEENGSAAAPTAGLHFTKELLEEIKAKGVHLVYLTLHVGLGTFRPVSVDNIEEHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A+ LN V+ GGRIV+VGTTS+R LET T+ +G I SG+T+IFITP
Sbjct: 226 HSEFYRLTEEAAKQLNEVRQAGGRIVAVGTTSIRTLETIGTKFNGEIQADSGWTDIFITP 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY+F+ V+ +NFHLPKSTL+MLVSAF G + T Y+HAI YRF+S+GD
Sbjct: 286 GYQFKVVEAFSTNFHLPKSTLVMLVSAFAGKDLTLAAYKHAIEEKYRFFSFGD 338
>gi|228902946|ref|ZP_04067087.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis IBL 4222]
gi|228967494|ref|ZP_04128522.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar sotto str. T04001]
gi|228792209|gb|EEM39783.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar sotto str. T04001]
gi|228856730|gb|EEN01249.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis IBL 4222]
Length = 350
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 150/353 (42%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVQLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT +G + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHNGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGD 337
>gi|322375519|ref|ZP_08050032.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sp. C300]
gi|321279782|gb|EFX56822.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sp. C300]
Length = 342
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 211/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RDS++L++V+ H + D+ L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDSSKLLIVNRETGEMQDKHFHSIIDM---LEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L + + W V A+P+K +K G ++F
Sbjct: 58 MNDTRVLPARLYGQK----EETGGHVELLLLKNTAGDEWEVLAKPAKRLKVGTRVNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLEVLESL-GEMPLPPYIHEK--LDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ +G I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFNGQIQSDSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G + Y HAI YRF+S+GD ++
Sbjct: 285 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRDLVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|270292452|ref|ZP_06198663.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sp. M143]
gi|270278431|gb|EFA24277.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sp. M143]
Length = 342
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 210/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ H + D+ L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETGEFQDKHFHSIIDM---LEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L + + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQK----EETGGHVELLLLKNTAGDEWEVLAKPAKRLKVGTRVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLEVLESL-GEMPLPPYIHEK--LDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSDEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G + Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRDLVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|257876333|ref|ZP_05655986.1| queuosine biosynthesis protein [Enterococcus casseliflavus EC20]
gi|257810499|gb|EEV39319.1| queuosine biosynthesis protein [Enterococcus casseliflavus EC20]
Length = 343
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 154/357 (43%), Positives = 210/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++FDF+LP IA P+ R S+RL+VV D ++ L DA+V
Sbjct: 2 LTTEDFDFELPEELIAQTPLSDRSSSRLLVVDRETGK---FEDKHFYNIIDELAPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A++ G + + L + ++W +P+K K G + F
Sbjct: 59 MNDTRVLPARIYGEK----QETGAHLEILLLNNIEGDTWETLIKPAKRAKVGTKITF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RLEA V ++ + G ++ F GI LE SL G +PLPPYI + D Y
Sbjct: 112 -GDGRLEAVVEEELDHGGRIIRFQYKGIFLEILESL-GEMPLPPYIKER----LEDPDRY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ DH M
Sbjct: 166 QTVYAKENGSAAAPTAGLHFTPELLEQIAAKGVKLVYLTLHVGLGTFRPVSVDNIADHEM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A LN V++ GG+IV+VGTTS+R LET T+ DG I SG+T+IFITP
Sbjct: 226 HSEFYRLTEEAAAQLNEVRANGGKIVAVGTTSIRTLETIGTKFDGQIKADSGWTSIFITP 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ V+ +NFHLPKSTL+MLVSAF G + T YQHAI YRF+S+GD L
Sbjct: 286 GYQFKIVEAFSTNFHLPKSTLVMLVSAFAGRDLTLSAYQHAIDERYRFFSFGDAMFL 342
>gi|196044952|ref|ZP_03112186.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus 03BB108]
gi|225866399|ref|YP_002751777.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus 03BB102]
gi|254764265|sp|C1ESW2|QUEA_BACC3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|196024440|gb|EDX63113.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus 03BB108]
gi|225787051|gb|ACO27268.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus 03BB102]
Length = 350
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 150/353 (42%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVELAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT +G + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHNGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGD 337
>gi|257425764|ref|ZP_05602188.1| S-adenosylmethioninetRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus 55/2053]
gi|257428424|ref|ZP_05604822.1| S-adenosylmethioninetRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus 65-1322]
gi|257431062|ref|ZP_05607441.1| S-adenosylmethioninetRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus 68-397]
gi|257433748|ref|ZP_05610106.1| S-adenosylmethioninetRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus E1410]
gi|257436663|ref|ZP_05612707.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus M876]
gi|282914445|ref|ZP_06322231.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus M899]
gi|282924791|ref|ZP_06332457.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus C101]
gi|293503518|ref|ZP_06667365.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus 58-424]
gi|293510537|ref|ZP_06669242.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus M809]
gi|293537080|ref|ZP_06671760.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus M1015]
gi|257271458|gb|EEV03604.1| S-adenosylmethioninetRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus 55/2053]
gi|257275265|gb|EEV06752.1| S-adenosylmethioninetRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus 65-1322]
gi|257278265|gb|EEV08907.1| S-adenosylmethioninetRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus 68-397]
gi|257281841|gb|EEV11978.1| S-adenosylmethioninetRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus E1410]
gi|257284014|gb|EEV14137.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus M876]
gi|282313157|gb|EFB43553.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus C101]
gi|282321626|gb|EFB51951.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus M899]
gi|290919925|gb|EFD96993.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus M1015]
gi|291095184|gb|EFE25449.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus 58-424]
gi|291466428|gb|EFF08949.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus M809]
Length = 341
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 151/357 (42%), Positives = 212/357 (59%), Gaps = 18/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHL-VSDLPAFLNSNDAI 59
M ++EFD+DLP S IA P+ RD +RL+V+ HL D+ + D +
Sbjct: 1 MNIEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETGE----MKHLHFKDIIEYFRPGDTL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 57 VLNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI K +D D
Sbjct: 111 --GNGKIIAECIKEMDQGGRIMCLHYEGI-LQERLDELGEMPLPPYI--KERLDDPDR-- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT LL+ + + G+ + FVTLHVG GTF PV V+D +DH
Sbjct: 164 YQTVYAKESGSAAAPTAGLHFTDELLTEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHE 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE + TA LN KS+G RI+SVGTTS R LET + SG+TNIFI P
Sbjct: 224 MHSEYYQMTQETADLLNDTKSKGHRIISVGTTSTRTLETIRRDHDKFVETSGWTNIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
G+ F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 284 GFDFKAIDGQITNFHLPKSTLVMLVSAFSTRENVLNAYKTAVNLEYRFFSFGDAMLI 340
>gi|86609129|ref|YP_477891.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557671|gb|ABD02628.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus sp. JA-2-3B'a(2-13)]
Length = 392
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 152/371 (40%), Positives = 214/371 (57%), Gaps = 20/371 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
++ +D+ LPP +IA PV PRD AR++VV+P+ LP +L D +V
Sbjct: 27 LLTASYDYTLPPDQIAQTPVEPRDQARMLVVYPDRH-----EHRRFCHLPDYLREGDLLV 81
Query: 61 FNNTKVITAQLNGVRFCHINRREKEI--SCTLHMRVSPN-------SWSVYARPSKVIKK 111
N+TKVI A+L G + R E + C + + SW V RP K +K
Sbjct: 82 LNDTKVIPARLFGAKEPSGARVEVLLLEPCLEGIPAAAQPLPDQAWSWRVLVRPGKRVKV 141
Query: 112 GDILHFFSQDGQ-SRLEATVID-KWNTGEILLVFSISGIE-LERQISLVGTIPLPPYI-A 167
GD + F+S+ G S L ATV+ TG ++ F G + E + VG IPLPPYI A
Sbjct: 142 GDRIGFWSKQGSPSGLRATVLALDPETGGRVVQFEWEGAQPFEEILEQVGRIPLPPYIKA 201
Query: 168 RKRPIDAR-DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGT 226
P + DYQT +AK GSVAAPTAGLHFT LL RL GI+ ++TL++G GT
Sbjct: 202 SGSPGSGQVRPEDYQTLWAKHPGSVAAPTAGLHFTQELLERLAQKGIQTAYITLNIGLGT 261
Query: 227 FMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII 286
F PV+ E +H +HSE + A T A+ ++RGGR+++VGTT +R LETA G +
Sbjct: 262 FRPVEAERVTEHRLHSEWLKVPAETVAAIQKAQARGGRVIAVGTTVVRSLETAAA-SGTL 320
Query: 287 NPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYR 346
PW G +++FI PGY +R + L++NFHLP+S+L+MLV+A G + +Y+ A+ YR
Sbjct: 321 QPWQGKSDLFIYPGYSWRVIQGLVTNFHLPRSSLMMLVAALIGRQRLLDLYREAVDQGYR 380
Query: 347 FYSYGDTSLLF 357
FYS+GD L+
Sbjct: 381 FYSFGDGMLIL 391
>gi|283470916|emb|CAQ50127.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus ST398]
Length = 341
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 151/357 (42%), Positives = 212/357 (59%), Gaps = 18/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHL-VSDLPAFLNSNDAI 59
M ++EFD+DLP S IA P+ RD +RL+V+ HL D+ + D +
Sbjct: 1 MNIEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETGE----MKHLHFKDIIEYFRPGDTL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 57 VLNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI K +D D
Sbjct: 111 --GNGKIIAECIKEMDQGGRIMRLHYEGI-LQERLDELGEMPLPPYI--KERLDDPDR-- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT LL+ + + G+ + FVTLHVG GTF PV V+D +DH
Sbjct: 164 YQTVYAKESGSAAAPTAGLHFTDELLTEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHE 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE + TA LN KS+G RI+SVGTTS R LET + SG+TNIFI P
Sbjct: 224 MHSEYYQMTQETADLLNDTKSKGHRIISVGTTSTRTLETIRRDHDKFVETSGWTNIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
G+ F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 284 GFDFKAIDGQITNFHLPKSTLVMLVSAFSNRENVLNAYKTAVNLEYRFFSFGDAMLI 340
>gi|229186657|ref|ZP_04313818.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus BGSC 6E1]
gi|228596916|gb|EEK54575.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus BGSC 6E1]
Length = 350
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 150/353 (42%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVELAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT +G + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHNGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGD 337
>gi|289167559|ref|YP_003445828.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase, (queuosine
biosynthesis protein) [Streptococcus mitis B6]
gi|288907126|emb|CBJ21960.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase, (queuosine
biosynthesis protein) [Streptococcus mitis B6]
Length = 342
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 210/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ H + D+ L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETGEMQDKHFHSIIDM---LEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L + + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQK----EETGGHVELLLLKNTAGDEWEVLAKPAKRLKVGTRVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLSAIVTEELTHGGRIVRFEYQGIFLEVLESL-GEMPLPPYIHEK--LDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ +G I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFEGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVS+F G E Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSSFAGRELVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|270308109|ref|YP_003330167.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase
[Dehalococcoides sp. VS]
gi|270154001|gb|ACZ61839.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase
[Dehalococcoides sp. VS]
Length = 343
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 144/359 (40%), Positives = 207/359 (57%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LP IA +P PRDS+RL+V++ ++ + ++ + D +V
Sbjct: 1 MKTSDFDYKLPQEYIAQKPAEPRDSSRLLVLNRQRG---ELTSRIFGEITEYFKPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN++V+ A++ G++ +I L R N W +P K K G I+
Sbjct: 58 MNNSRVLPARIKGIK----RDTAAKIEILLLKRDGDNCWEALLKPGKRTKPGTIIDIHQH 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
++ +A V+ + G LL FS E + +G +PLPPYI P+ + Y
Sbjct: 114 GEETSTQAEVLADKDDGIKLLRFSD-----ETHLMKLGEVPLPPYI--HTPVSNPER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA GSVAAPTAGLHFT++LL RL IG+ +VTLH+G TF PVK ED DHI+
Sbjct: 165 QTVYALTNGSVAAPTAGLHFTTDLLKRLSEIGVICTYVTLHIGLDTFRPVKEEDPKDHII 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
H E G + A TA A+ K+ G R+ VGT++ RL+E A+ +++GII P+S + ++FI
Sbjct: 225 HREYGILSAETAAAICQAKANGKRVFCVGTSATRLVEQASSLSQNGIIEPYSDWADLFIL 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+FR VD ++NFHLP+ST LML +AF G KK Y+ AI YRFYS+GD L+
Sbjct: 285 PGYKFRVVDCFITNFHLPRSTPLMLTAAFAGWPFLKKAYEKAIHEHYRFYSFGDAMLVL 343
>gi|218899587|ref|YP_002447998.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus G9842]
gi|226736731|sp|B7IIT0|QUEA_BACC2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|218545497|gb|ACK97891.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus G9842]
Length = 350
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 150/353 (42%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEDRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVQLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT +G + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHNGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGD 337
>gi|306829783|ref|ZP_07462972.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus mitis ATCC 6249]
gi|304428134|gb|EFM31225.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus mitis ATCC 6249]
Length = 342
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 210/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ H + D+ L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETGEFQDKHFHSIIDM---LEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L + + W V A+P+K +K G ++F
Sbjct: 58 MNDTRVLPARLYGQK----EETGGHVELLLLKNTAGDEWEVLAKPAKRLKVGTRVNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V + G ++ F GI LE SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLSAVVTQELTHGGRIVRFEYQGIFLEVLESL-GEMPLPPYIHEK--LDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G + Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKFVDAFSTNFHLPKSTLVMLVSAFAGRDLVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|319639459|ref|ZP_07994209.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
mucosa C102]
gi|317399354|gb|EFV80025.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
mucosa C102]
Length = 342
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 155/357 (43%), Positives = 211/357 (59%), Gaps = 20/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF+LP IA P R S+RL+V P L I D DLP ++ D +V
Sbjct: 1 MDISDFDFELPEKLIAQHPPEVRGSSRLLVALPTLP----IEDKHFGDLPDYVAPGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + +I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKASG-----GKIEALIERVLDAHTALAHIRSSKSPKPGTELIF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ + A ++++ E L G + + + G +PLPPYI +R D D
Sbjct: 109 --EGDIRAVMLER---AEELFYLKFEGAQTVYELLEQNGHLPLPPYI--ERAADDEDDSR 161
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK QG+VAAPTAGLHFT LL RL + G++ VTLHVGAGTF PV+V+ ++H
Sbjct: 162 YQTVYAKYQGAVAAPTAGLHFTDELLGRLKAKGVETAEVTLHVGAGTFQPVRVDKIEEHK 221
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE + A T A+ + K+RG ++ +VGTTS+R LE+A E G + G T+IFITP
Sbjct: 222 MHSEWFDVPAETVAAVEAAKARGNKVWAVGTTSMRALESAACETGRLEAGRGDTDIFITP 281
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GYRF D L++NFHLPKSTLLMLVSAF G+E + +Y+HA+ YRF+SYGD +L
Sbjct: 282 GYRFNVADRLITNFHLPKSTLLMLVSAFSGMEHIRSVYRHAVEQEYRFFSYGDAMIL 338
>gi|225573604|ref|ZP_03782359.1| hypothetical protein RUMHYD_01798 [Blautia hydrogenotrophica DSM
10507]
gi|225039043|gb|EEG49289.1| hypothetical protein RUMHYD_01798 [Blautia hydrogenotrophica DSM
10507]
Length = 341
Score = 264 bits (675), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 153/359 (42%), Positives = 202/359 (56%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F ++LP IA P+ R S+RL+ + IS D+ +L D +V
Sbjct: 1 MKTSDFYYELPQELIAQDPLEDRSSSRLLHLDRRTG---EISHGTFQDILTYLKPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKE---ISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
N+TKVI A+L G R+E I L R + W +P K K G L F
Sbjct: 58 INDTKVIPARLFG-------RKEDTGAVIELLLLKRRENDVWETLVKPGKKAKVGTKLIF 110
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
G L ++D G L+ F GI E + +G +PLPPYI K +D
Sbjct: 111 ----GDGILCGEILDVVEEGNRLIQFQYEGI-FEEILDQLGEMPLPPYITHK----LKDK 161
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YAK +GS AAPTAGLHFT LL R+ +G+K+ VTLHVG GTF PVKVED +
Sbjct: 162 NRYQTVYAKHEGSAAAPTAGLHFTPELLQRVKEMGVKIAHVTLHVGLGTFRPVKVEDVAE 221
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MHSE ++ A +N K GGR++ VGTTS R LE+AT E+G + SG+T IFI
Sbjct: 222 HHMHSEFYVVEQEQAALVNETKRNGGRVICVGTTSCRTLESATDEEGKLQAGSGWTEIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+F+ +D L++NFHLP+STLLMLVSAF G E+ Y+ A+ YRF+S+GD +
Sbjct: 282 YPGYQFKIMDGLITNFHLPESTLLMLVSAFAGKEKIMAAYKEAVRERYRFFSFGDAMFI 340
>gi|312143982|ref|YP_003995428.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Halanaerobium sp. 'sapolanicus']
gi|311904633|gb|ADQ15074.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Halanaerobium sp. 'sapolanicus']
Length = 347
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 149/362 (41%), Positives = 207/362 (57%), Gaps = 19/362 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V+EFD+ LP IA +P+ RD +RLMV+ P +I + L +L +L D ++
Sbjct: 1 MRVEEFDYQLPEELIAQKPLPERDMSRLMVLDPQNK---MIREDLFKNLKRYLEPGDRLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN++VI A+L G + EI L + W V +P + KKG + F
Sbjct: 58 LNNSRVIPARLYGEKIPTGT----EIEILLLNELKEGRWEVLVKPGRRAKKGVKIQF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARDYV 178
Q+ LEA V++ + G ++ FS E ++ +G +PLPPYI K R
Sbjct: 111 --QNILEAEVLEYTDFGGRIVEFSWDDGCSSFEEILNKLGEMPLPPYINEKLDNPER--- 165
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y+K +GS AAPTAGLHFT LL L + G+K+ ++TLHVG GTF PVK E +DH
Sbjct: 166 -YQTVYSKKRGSAAAPTAGLHFTDQLLRDLENYGVKIDYITLHVGLGTFRPVKSEKIEDH 224
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E I T + ++ G ++V+VGTT R LETA + G I + G+T+IFI
Sbjct: 225 KMHAEYAEISPETVARIKKTQANGNKVVAVGTTVTRTLETA-AQSGSIKAFKGWTDIFIY 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY F+ +D L++NFHLPKSTLLMLVSA G E K Y A+ YRF+S GD L+
Sbjct: 284 PGYEFKVIDSLITNFHLPKSTLLMLVSALAGKELILKAYNQAVEEEYRFFSLGDAMLILN 343
Query: 359 KR 360
++
Sbjct: 344 RK 345
>gi|282919414|ref|ZP_06327149.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus C427]
gi|282317224|gb|EFB47598.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus C427]
Length = 341
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 151/357 (42%), Positives = 212/357 (59%), Gaps = 18/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHL-VSDLPAFLNSNDAI 59
M ++EFD+DLP S IA P+ RD +RL+V+ HL D+ + D +
Sbjct: 1 MNIEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETGE----MKHLHFKDIIEYFRPGDTL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 57 VLNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI K +D D
Sbjct: 111 --GNDKIIAECIKEMDQGGRIMRLHYEGI-LQERLDELGEMPLPPYI--KERLDDPDR-- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT LL+ + + G+ + FVTLHVG GTF PV V+D +DH
Sbjct: 164 YQTVYAKESGSAAAPTAGLHFTDELLTEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHE 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE + TA LN KS+G RI+SVGTTS R LET + SG+TNIFI P
Sbjct: 224 MHSEYYQMTQETADLLNDTKSKGHRIISVGTTSTRTLETIRRDHDKFVETSGWTNIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
G+ F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 284 GFDFKAIDGQITNFHLPKSTLVMLVSAFSTRENVLNAYKTAVNLEYRFFSFGDAMLI 340
>gi|326204477|ref|ZP_08194334.1| LOW QUALITY PROTEIN:
S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Clostridium papyrosolvens DSM 2782]
gi|325985270|gb|EGD46109.1| LOW QUALITY PROTEIN:
S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Clostridium papyrosolvens DSM 2782]
Length = 340
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 153/361 (42%), Positives = 203/361 (56%), Gaps = 27/361 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+ LP IA P+ RD +RLMV++ I L +D+ +L+ D +V
Sbjct: 1 MDLHDFDYYLPEELIAQHPMEKRDMSRLMVLNKETG---EIEHKLFTDIVNYLDEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKE-----ISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
NNT+VI A+L G EKE I L RV + W V RP K K G
Sbjct: 58 LNNTRVIPARLLG---------EKEGTGGKIEFVLLKRVEGDKWEVILRPGKKAKPGSRF 108
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
F G L+A +++ + G L+ F G+ E + VG +PLPPYI K R
Sbjct: 109 VF----GNGELKAEILEVLDEGNRLVRFIYDGV-FEEILDRVGIMPLPPYITEKLENPER 163
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
YQT YAK+ GS AAPTAGLHFT LL L G+K+ +V LHVG GTF PVKV+D
Sbjct: 164 ----YQTVYAKVNGSAAAPTAGLHFTKELLDSLTRKGVKIAYVMLHVGLGTFRPVKVDDI 219
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
H MHSE I T +N + +G ++V+VGTTS R+LET + G I P G+T+I
Sbjct: 220 TQHKMHSEYYSISQETCDIINDTRQKGKKVVAVGTTSCRVLETV-GKSGRIAPCDGWTDI 278
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGYRF+ VD L++NFHLP+STL+MLVS+ G + Y A+ YRF+S+GD
Sbjct: 279 FIYPGYRFKVVDRLITNFHLPESTLIMLVSSLAGRDNVMHAYNVAVEEKYRFFSFGDAMF 338
Query: 356 L 356
+
Sbjct: 339 I 339
>gi|330998873|ref|ZP_08322600.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Parasutterella excrementihominis YIT 11859]
gi|329576087|gb|EGG57606.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Parasutterella excrementihominis YIT 11859]
Length = 354
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 153/361 (42%), Positives = 210/361 (58%), Gaps = 21/361 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LP S IA P+ R ++RL+ V P+ S + D D+ L D +VFN
Sbjct: 8 LSDFDFELPESLIAQYPLKDRAASRLLHVKPDGS----VEDLHFRDILNLLKPGDLLVFN 63
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSV-YARPSKVIKKGDILHFFSQD 121
NTKVI A+LNG + + + RV+ ++ R SK K G IL+F +
Sbjct: 64 NTKVIKARLNG------KKETGGVFEAMTERVTGTYEAISMMRASKAAKPGTILYFDHPE 117
Query: 122 GQSRLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ A V+ + GE L F +E+ + G +PLPPYI + + D Y
Sbjct: 118 GKEPARAEVLGR--EGEFFRLKFDHPVLEV---LDEYGKVPLPPYI--QHAAEKSDESRY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK G+VAAPTAGLHFT LL ++ G + FVTLHVGAGTF PV+VE+ +H+M
Sbjct: 171 QTVYAKYPGAVAAPTAGLHFTDELLQQIRDKGCEEVFVTLHVGAGTFQPVRVENLSEHVM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE--DGIINPWSGFTNIFIT 298
HSE I A+ +N K+ G R+V VGTTSLR +E + ++ +G + S T +FI
Sbjct: 231 HSEWYSISPEAAEKINKAKAEGRRVVCVGTTSLRTVEASASQNPEGKVRAESADTRLFIK 290
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY F+ D +++NFHLPKSTL+MLVSA CG +E Y+HA+ YRF+SYGD L Q
Sbjct: 291 PGYEFKVCDAMVTNFHLPKSTLVMLVSALCGRDEILAAYKHAVDEKYRFFSYGDACFLEQ 350
Query: 359 K 359
K
Sbjct: 351 K 351
>gi|315613447|ref|ZP_07888355.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis ATCC 49296]
gi|315314443|gb|EFU62487.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis ATCC 49296]
Length = 342
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 210/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ H + D+ L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETGEMQDKHFHSIIDM---LEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L + + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQK----EETGGHVELLLLKNTAGDEWEVLAKPAKRLKVGTRVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLEVLESL-GEMPLPPYIHEK--LDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + S G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQSKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ +G I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFNGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G + Y HAI YRF+S+GD ++
Sbjct: 285 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRDLVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|325915107|ref|ZP_08177433.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
vesicatoria ATCC 35937]
gi|325538629|gb|EGD10299.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
vesicatoria ATCC 35937]
Length = 356
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 155/372 (41%), Positives = 217/372 (58%), Gaps = 38/372 (10%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F++ LP IA P+ R ++RL+VV P P SD V DLP L D ++
Sbjct: 1 MKKSDFNYALPEELIAQAPLAERAASRLLVVSP---APAAFSDRQVRDLPELLQPGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCH------INR--REKEISCTLHMRVSPNSWSVYARPSKVIKKG 112
FN+T+VI A+L G + I R E+E + SP + S+ A + G
Sbjct: 58 FNDTRVIPARLFGQKASGGRVEILIERLLGEREARVQIGASKSPKAGSLIA-----LDAG 112
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
+DG+ LL F I + LE+ + G +PLPPYI R+ +
Sbjct: 113 GQAEVLGRDGEF--------------YLLRFEIP-LPLEQWLPEAGRLPLPPYIRREPGL 157
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+ R+ YQT +A+ G+VAAPTAGLHF +LL+RL GI+ VTLHVGAGTF PV+V
Sbjct: 158 EDRER--YQTVFAREVGAVAAPTAGLHFDEDLLARLRERGIEFGHVTLHVGAGTFQPVRV 215
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTE---DGIIN 287
+ D H+MH E + A + + ++RGGR+++VGTT +R LE+A TTE +G +
Sbjct: 216 DALDQHVMHKEWLNVGAALVEQVRRTRARGGRVIAVGTTVVRSLESAWRTTEAAPEGELL 275
Query: 288 PWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
P++G T IFI PGYR R+VD +++NFHLP+STLLM+VSAF G E + YQHAI+ YRF
Sbjct: 276 PFAGETQIFILPGYRIRSVDAMVTNFHLPESTLLMMVSAFAGRERIFEAYQHAIAQRYRF 335
Query: 348 YSYGDTSLLFQK 359
+SYGD LL+ +
Sbjct: 336 FSYGDAMLLWGR 347
>gi|241664129|ref|YP_002982489.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ralstonia
pickettii 12D]
gi|240866156|gb|ACS63817.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Ralstonia
pickettii 12D]
Length = 356
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 154/356 (43%), Positives = 211/356 (59%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FDFDLPP IA + R ++RL+ V + D +DL +L D +V
Sbjct: 2 LTLSDFDFDLPPELIAQTALPDRTASRLLAVR-RAGDAVHFEDRQFADLVDYLRPGDLLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A RF ++ + + ++ R SK +G L
Sbjct: 61 FNDTRVIKA-----RFFGQKASGGKVEVLVERLLDEHTVLAQIRSSKSPVEGTTLRL--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ TV + L F ++L I G +PLPPYI + D+ D Y
Sbjct: 113 --ADAFDVTVGPRAEPF-FTLRFPQPALDL---IEQYGRLPLPPYI--EHDPDSFDETRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF L ++L ++GI+ F+TLHVGAGTF PV+VE+ +H M
Sbjct: 165 QTVYARNPGAVAAPTAGLHFDDALFAKLDAMGIQRGFLTLHVGAGTFQPVRVENIAEHRM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I A A+A+ + ++ GGRI++VGTTS+R LE+A DG +N SG T+IFITPG
Sbjct: 225 HSEWYEITAELAEAIRATRAAGGRIIAVGTTSMRALESAAQPDGTLNACSGETDIFITPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRFRAVD+L++NFHLPKSTLLMLVSAF G+ ++ YQHAI+ YRF+SYGD LL
Sbjct: 285 YRFRAVDLLVTNFHLPKSTLLMLVSAFAGMSAIREAYQHAIAQRYRFFSYGDAMLL 340
>gi|15924630|ref|NP_372164.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus Mu50]
gi|15927220|ref|NP_374753.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus N315]
gi|21283319|ref|NP_646407.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus MW2]
gi|49483884|ref|YP_041108.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus MRSA252]
gi|49486473|ref|YP_043694.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus MSSA476]
gi|148268120|ref|YP_001247063.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus JH9]
gi|150394188|ref|YP_001316863.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus JH1]
gi|156979958|ref|YP_001442217.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus Mu3]
gi|253317209|ref|ZP_04840422.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus str. CF-Marseille]
gi|255006425|ref|ZP_05145026.2| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus Mu50-omega]
gi|258438213|ref|ZP_05689497.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A9299]
gi|258443676|ref|ZP_05692015.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A8115]
gi|258446883|ref|ZP_05695037.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A6300]
gi|258448797|ref|ZP_05696909.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A6224]
gi|258453753|ref|ZP_05701728.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A5937]
gi|269203265|ref|YP_003282534.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus ED98]
gi|282893144|ref|ZP_06301378.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A8117]
gi|282904220|ref|ZP_06312108.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus C160]
gi|282906046|ref|ZP_06313901.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus Btn1260]
gi|282916908|ref|ZP_06324666.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus D139]
gi|282928275|ref|ZP_06335880.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A10102]
gi|283958400|ref|ZP_06375851.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus A017934/97]
gi|295406761|ref|ZP_06816566.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A8819]
gi|295428215|ref|ZP_06820847.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus EMRSA16]
gi|296275925|ref|ZP_06858432.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus MR1]
gi|297245656|ref|ZP_06929521.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A8796]
gi|54038976|sp|P65951|QUEA_STAAN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|54038977|sp|P65952|QUEA_STAAW RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|54041780|sp|P65950|QUEA_STAAM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|56749512|sp|Q6G8S9|QUEA_STAAS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|56749559|sp|Q6GG64|QUEA_STAAR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|91207405|sp|Q2YT90|QUEA_STAAB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|166218744|sp|A7X356|QUEA_STAA1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|189038882|sp|A6U2A8|QUEA_STAA2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|189038883|sp|A5ITG4|QUEA_STAA9 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|13701438|dbj|BAB42732.1| S-adenosylmethionine tRNA ribosyltransferase [Staphylococcus aureus
subsp. aureus N315]
gi|14247412|dbj|BAB57802.1| S-adenosylmethionine tRNA ribosyltransferase [Staphylococcus aureus
subsp. aureus Mu50]
gi|21204759|dbj|BAB95455.1| S-adenosylmethionine tRNA ribosyltransferase [Staphylococcus aureus
subsp. aureus MW2]
gi|49242013|emb|CAG40711.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus MRSA252]
gi|49244916|emb|CAG43377.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus MSSA476]
gi|147741189|gb|ABQ49487.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus JH9]
gi|149946640|gb|ABR52576.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus JH1]
gi|156722093|dbj|BAF78510.1| S-adenosylmethionine tRNA ribosyltransferase [Staphylococcus aureus
subsp. aureus Mu3]
gi|257848257|gb|EEV72248.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A9299]
gi|257851082|gb|EEV75025.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A8115]
gi|257854458|gb|EEV77407.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A6300]
gi|257858075|gb|EEV80964.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A6224]
gi|257864073|gb|EEV86826.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A5937]
gi|262075555|gb|ACY11528.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus ED98]
gi|282319395|gb|EFB49747.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus D139]
gi|282331338|gb|EFB60852.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus Btn1260]
gi|282590082|gb|EFB95164.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A10102]
gi|282595838|gb|EFC00802.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus C160]
gi|282764462|gb|EFC04588.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A8117]
gi|283790549|gb|EFC29366.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus A017934/97]
gi|285817322|gb|ADC37809.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus 04-02981]
gi|294968508|gb|EFG44532.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A8819]
gi|295128573|gb|EFG58207.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus EMRSA16]
gi|297177307|gb|EFH36559.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A8796]
gi|302333313|gb|ADL23506.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus JKD6159]
gi|312830026|emb|CBX34868.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus ECT-R 2]
gi|315129925|gb|EFT85915.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus CGS03]
gi|315195543|gb|EFU25930.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus CGS00]
gi|329727664|gb|EGG64120.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus 21172]
gi|329733065|gb|EGG69402.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus 21193]
Length = 341
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 151/357 (42%), Positives = 212/357 (59%), Gaps = 18/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHL-VSDLPAFLNSNDAI 59
M ++EFD+DLP S IA P+ RD +RL+V+ HL D+ + D +
Sbjct: 1 MNIEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETGE----MKHLHFKDIIEYFRPGDTL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 57 VLNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI K +D D
Sbjct: 111 --GNGKIIAECIKEMDQGGRIMRLHYEGI-LQERLDELGEMPLPPYI--KERLDDPDR-- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT LL+ + + G+ + FVTLHVG GTF PV V+D +DH
Sbjct: 164 YQTVYAKESGSAAAPTAGLHFTDELLTEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHE 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE + TA LN KS+G RI+SVGTTS R LET + SG+TNIFI P
Sbjct: 224 MHSEYYQMTQETADLLNDTKSKGHRIISVGTTSTRTLETIRRDHDKFVETSGWTNIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
G+ F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 284 GFDFKAIDGQITNFHLPKSTLVMLVSAFSTRENVLNAYKTAVNLEYRFFSFGDAMLI 340
>gi|313608657|gb|EFR84503.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL F2-208]
Length = 314
Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 139/313 (44%), Positives = 200/313 (63%), Gaps = 14/313 (4%)
Query: 41 ISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWS 100
I D +++ ++LN DA+V N+T+V+ A+L+G++ + I L + N+W
Sbjct: 10 IKDQHFTEIISYLNEGDALVLNDTRVLPARLHGIK----DETGAHIEVLLLKQKEGNAWE 65
Query: 101 VYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTI 160
+P+K I+KG + F G L+AT +++ G +L FS GI E + +G +
Sbjct: 66 TLVKPAKRIRKGATITF----GDGALKATCLEELEHGGRILEFSYEGIFYE-VLEQLGEM 120
Query: 161 PLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTL 220
PLPPYI + R YQT YAK GS AAPTAGLHFT +LL+++ + G+++ FVTL
Sbjct: 121 PLPPYIKEQLADQDR----YQTVYAKENGSAAAPTAGLHFTKDLLAKISAKGVEIIFVTL 176
Query: 221 HVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-A 279
HVG GTF PV VEDT +H MHSE + +A+ +N +K++GG++V+VGTTS+R LET A
Sbjct: 177 HVGLGTFRPVDVEDTANHKMHSEFYRLTEESAERINKIKAQGGKVVAVGTTSIRTLETIA 236
Query: 280 TTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQH 339
+ DG + SG+T IFI+PGY F+AVD L++NFHLPKSTL+MLVSA + Y H
Sbjct: 237 SRHDGKLVAESGWTEIFISPGYTFQAVDALITNFHLPKSTLIMLVSALSDRTKILAAYNH 296
Query: 340 AISHAYRFYSYGD 352
A+ YRF+S+GD
Sbjct: 297 AVEEQYRFFSFGD 309
>gi|69249043|ref|ZP_00604858.1| Queuosine biosynthesis protein [Enterococcus faecium DO]
gi|257878859|ref|ZP_05658512.1| queuosine biosynthesis protein [Enterococcus faecium 1,230,933]
gi|257881495|ref|ZP_05661148.1| queuosine biosynthesis protein [Enterococcus faecium 1,231,502]
gi|257885767|ref|ZP_05665420.1| queuosine biosynthesis protein [Enterococcus faecium 1,231,501]
gi|257890717|ref|ZP_05670370.1| queuosine biosynthesis protein [Enterococcus faecium 1,231,410]
gi|260558424|ref|ZP_05830620.1| queuosine biosynthesis protein [Enterococcus faecium C68]
gi|261207140|ref|ZP_05921829.1| queuosine biosynthesis protein [Enterococcus faecium TC 6]
gi|289565261|ref|ZP_06445712.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium D344SRF]
gi|293556909|ref|ZP_06675470.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium E1039]
gi|293560279|ref|ZP_06676776.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium E1162]
gi|294615101|ref|ZP_06694987.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium E1636]
gi|294618443|ref|ZP_06698013.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium E1679]
gi|294620892|ref|ZP_06700093.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium U0317]
gi|314943499|ref|ZP_07850266.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX0133C]
gi|314991571|ref|ZP_07857047.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX0133B]
gi|314994904|ref|ZP_07860031.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX0133a01]
gi|68194302|gb|EAN08818.1| Queuosine biosynthesis protein [Enterococcus faecium DO]
gi|257813087|gb|EEV41845.1| queuosine biosynthesis protein [Enterococcus faecium 1,230,933]
gi|257817153|gb|EEV44481.1| queuosine biosynthesis protein [Enterococcus faecium 1,231,502]
gi|257821623|gb|EEV48753.1| queuosine biosynthesis protein [Enterococcus faecium 1,231,501]
gi|257827077|gb|EEV53703.1| queuosine biosynthesis protein [Enterococcus faecium 1,231,410]
gi|260075598|gb|EEW63904.1| queuosine biosynthesis protein [Enterococcus faecium C68]
gi|260078768|gb|EEW66470.1| queuosine biosynthesis protein [Enterococcus faecium TC 6]
gi|289162917|gb|EFD10766.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium D344SRF]
gi|291592043|gb|EFF23666.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium E1636]
gi|291595284|gb|EFF26607.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium E1679]
gi|291599503|gb|EFF30519.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium U0317]
gi|291600993|gb|EFF31284.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium E1039]
gi|291605729|gb|EFF35166.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium E1162]
gi|313590886|gb|EFR69731.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX0133a01]
gi|313593855|gb|EFR72700.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX0133B]
gi|313597871|gb|EFR76716.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX0133C]
Length = 343
Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 207/356 (58%), Gaps = 23/356 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++FDFDLP IA P+ RD +RL+V+ + D ++ L DA+V
Sbjct: 2 LTTEDFDFDLPEELIAQTPLKDRDHSRLLVLDRKTGE---MEDKHFHEIIEELQPGDALV 58
Query: 61 FNNTKVITAQLNGVR---FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
NNT+V+ A+L G + H+ L ++W +P+K K G + F
Sbjct: 59 MNNTRVLPARLYGEKPDTGAHLE-------VLLLTNTQGDTWETLIKPAKRAKVGTRISF 111
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
G RL+A V ++ G ++ F GI LE SL G +PLPPYI + D
Sbjct: 112 ----GDGRLQAVVKEELEHGGRIIDFEYEGIFLEILESL-GEMPLPPYIKER----LEDP 162
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YAK GS AAPTAGLHFT LL + + G+++ ++TLHVG GTF PV V+ ++
Sbjct: 163 DRYQTVYAKENGSAAAPTAGLHFTKELLDEIEAKGVELVYLTLHVGLGTFRPVSVDKIEE 222
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIF 296
H MHSE + A+ LN V+ GG+IV+VGTTS+R LET T+ +G I SG+T+IF
Sbjct: 223 HHMHSEFYRLTEEAAERLNQVRKNGGKIVAVGTTSIRTLETIGTKFNGEIKADSGWTDIF 282
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
ITPGY F+ V+ +NFHLPKSTL+MLVSAF G E T YQHAI YRF+S+GD
Sbjct: 283 ITPGYEFKVVEAFSTNFHLPKSTLVMLVSAFAGRELTLSAYQHAIEERYRFFSFGD 338
>gi|229013635|ref|ZP_04170766.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
mycoides DSM 2048]
gi|228747694|gb|EEL97566.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
mycoides DSM 2048]
Length = 354
Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 151/353 (42%), Positives = 207/353 (58%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L D +V
Sbjct: 5 MDINLFDFHLPEELIAQIPLEERETSRLMVLDRETGD---IEHKHFTDILSYLQEGDCLV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 62 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLIKPAKRVKEGTVISF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT I + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 115 -GEGKLKATCIGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+ + F+TLHVG GTF PV + ++H M
Sbjct: 169 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVGLAFITLHVGLGTFRPVSADTIEEHHM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT G + SG+T+IF+ P
Sbjct: 229 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDNSGKLCAASGWTDIFMYP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 289 GYEFKAIDGLITNFHLPKSTLIMLVSAFSNRDNVLHAYNEAVKEKYRFFSFGD 341
>gi|118580221|ref|YP_901471.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Pelobacter
propionicus DSM 2379]
gi|166216735|sp|A1APZ3|QUEA_PELPD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|118502931|gb|ABK99413.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Pelobacter
propionicus DSM 2379]
Length = 343
Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 199/356 (55%), Gaps = 20/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+VKEFD+ LP IA P RD +RLM+++ I L D+ L D +V
Sbjct: 1 MLVKEFDYHLPEELIARYPAPERDGSRLMLLNRESG---TIGHGLFRDIADHLRPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G + EI WS R SK ++ G ++
Sbjct: 58 LNDTRVIPARLFGRK---ATGGRVEIFLVRRQETQAERWSCLMRSSKGMRPGQLITL--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSIS---GIELERQISLVGTIPLPPYIARKRPIDARDY 177
+ A V+++ LL F + + LER+ G +PLPPY+ +RP ++ D
Sbjct: 112 --AGAMTALVVERLEPEGWLLEFQGAEPFSVWLERE----GEMPLPPYL--QRPAESGDQ 163
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
+ YQT +A+ G+VAAPTAGLHFT LL RL G+ +TLH G GTF P++VE D
Sbjct: 164 LRYQTVFARSAGAVAAPTAGLHFTPELLERLAERGVATACLTLHTGPGTFQPLRVERVQD 223
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H +HSE I A T QA+ K RGGR+V+VGTTS R LE A E G + P SG +IFI
Sbjct: 224 HRIHSERYHISAETCQAIAETKQRGGRVVAVGTTSARTLEYAADEKGGLCPGSGDADIFI 283
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
PGYRFR VD L++NFHLP+STL+MLVSAF G E Y A YRFYSYGD
Sbjct: 284 YPGYRFRVVDALVTNFHLPESTLIMLVSAFAGKEYVFHAYHEAARLGYRFYSYGDA 339
>gi|229062113|ref|ZP_04199438.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH603]
gi|229169161|ref|ZP_04296876.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH621]
gi|228614389|gb|EEK71499.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH621]
gi|228717265|gb|EEL68940.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH603]
Length = 354
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 151/353 (42%), Positives = 207/353 (58%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L D +V
Sbjct: 5 MDINLFDFHLPEELIAQIPLEERETSRLMVLDRETGD---IEHKHFTDILSYLQEGDCLV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 62 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLIKPAKRVKEGTVISF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT I + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 115 -GEGKLKATCIGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+ + F+TLHVG GTF PV + ++H M
Sbjct: 169 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVGLAFITLHVGLGTFRPVSADTIEEHHM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT G + SG+T+IF+ P
Sbjct: 229 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHSGKLCAASGWTDIFMYP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 289 GYEFKAIDGLITNFHLPKSTLIMLVSAFSNRDNVLHAYNEAVKEKYRFFSFGD 341
>gi|116515685|ref|YP_816714.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae D39]
gi|148997530|ref|ZP_01825135.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP11-BS70]
gi|168575875|ref|ZP_02721790.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae MLV-016]
gi|46577049|sp|Q8DPA0|QUEA_STRR6 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|122278400|sp|Q04JT4|QUEA_STRP2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|116076261|gb|ABJ53981.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae D39]
gi|147756585|gb|EDK63626.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP11-BS70]
gi|183578232|gb|EDT98760.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae MLV-016]
Length = 342
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 209/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ H + D+ L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETGEMQDKHFHSIIDM---LEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGSHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F I LE SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQRIFLEVLESL-GEMPLPPYIHEK--LDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y H+I YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHSIQEHYRFFSFGDAMFIY 342
>gi|314938950|ref|ZP_07846215.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX0133a04]
gi|314948207|ref|ZP_07851601.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX0082]
gi|314951567|ref|ZP_07854613.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX0133A]
gi|313596261|gb|EFR75106.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX0133A]
gi|313641659|gb|EFS06239.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX0133a04]
gi|313645340|gb|EFS09920.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX0082]
Length = 347
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 207/356 (58%), Gaps = 23/356 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++FDFDLP IA P+ RD +RL+V+ + D ++ L DA+V
Sbjct: 6 LTTEDFDFDLPEELIAQTPLKDRDHSRLLVLDRKTGE---MEDKHFHEIIEELQPGDALV 62
Query: 61 FNNTKVITAQLNGVR---FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
NNT+V+ A+L G + H+ L ++W +P+K K G + F
Sbjct: 63 MNNTRVLPARLYGEKPDTGAHLE-------VLLLTNTQGDTWETLIKPAKRAKVGTRISF 115
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
G RL+A V ++ G ++ F GI LE SL G +PLPPYI + D
Sbjct: 116 ----GDGRLQAVVKEELEHGGRIIDFEYEGIFLEILESL-GEMPLPPYIKER----LEDP 166
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YAK GS AAPTAGLHFT LL + + G+++ ++TLHVG GTF PV V+ ++
Sbjct: 167 DRYQTVYAKENGSAAAPTAGLHFTKELLDEIEAKGVELVYLTLHVGLGTFRPVSVDKIEE 226
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIF 296
H MHSE + A+ LN V+ GG+IV+VGTTS+R LET T+ +G I SG+T+IF
Sbjct: 227 HHMHSEFYRLTEEAAERLNQVRKNGGKIVAVGTTSIRTLETIGTKFNGEIKADSGWTDIF 286
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
ITPGY F+ V+ +NFHLPKSTL+MLVSAF G E T YQHAI YRF+S+GD
Sbjct: 287 ITPGYEFKVVEAFSTNFHLPKSTLVMLVSAFAGRELTLSAYQHAIEERYRFFSFGD 342
>gi|283770714|ref|ZP_06343606.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus H19]
gi|283460861|gb|EFC07951.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus H19]
Length = 341
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 149/356 (41%), Positives = 211/356 (59%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EFD+DLP S IA P+ RD +RL+V+ + D+ + D +V
Sbjct: 1 MNIEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETGEMKYLH---FKDIIEYFRPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 58 LNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI K +D D Y
Sbjct: 111 -GNGKIIAECIKEMDQGGRIMRLHYEGI-LQERLDELGEMPLPPYI--KERLDDPDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + FVTLHVG GTF PV V+D +DH M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTDELLTEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN KS+G RI+SVGTTS R LET + SG+TNIFI PG
Sbjct: 225 HSEYYQMTQETADLLNDTKSKGHRIISVGTTSTRTLETIRRDHDKFVETSGWTNIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 285 FDFKAIDGQITNFHLPKSTLVMLVSAFSTRENVLNAYKTAVNLEYRFFSFGDAMLI 340
>gi|229543705|ref|ZP_04432765.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Bacillus
coagulans 36D1]
gi|229328125|gb|EEN93800.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Bacillus
coagulans 36D1]
Length = 342
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 144/357 (40%), Positives = 213/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FD++LP IA P+ R +RLMV+ I + ++ +L D +V
Sbjct: 1 MKLDLFDYELPEELIAQTPLKNRSDSRLMVLDKKTG---EIEHSVFKNITQYLRPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKV+ A+L G++ + +I L ++ + W +P+K +K G ++ F
Sbjct: 58 LNNTKVLPARLFGIK----DETGAKIEVLLLKQLEGDRWETLVKPAKRVKTGTVVRF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L A ++ + G ++ F GI E ++ +G +PLPPYI K ++ +D Y
Sbjct: 111 -GDGQLSAVCAEELDHGGRVMDFQYEGIFYE-VLNELGKMPLPPYI--KEQLEDQD--RY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + ++G+K+ ++TLHVG GTF PV E+ ++H M
Sbjct: 165 QTVYAKEPGSAAAPTAGLHFTEALLKEIEAMGVKIVYITLHVGLGTFRPVNEENIENHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + A+ + VK GGR+VSVGTTS R LET A+ DG I SG+T+IFI P
Sbjct: 225 HAEFYQVSEEAARTITEVKENGGRVVSVGTTSTRTLETVASAHDGKIVASSGWTDIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+++A+D L++NFHLPKSTL+M+VSA G E Y+ A+ YRF+S+GD L+
Sbjct: 285 GYQYKAIDALITNFHLPKSTLIMMVSALAGRENILHAYETAVKEKYRFFSFGDAMLI 341
>gi|227550874|ref|ZP_03980923.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX1330]
gi|227179972|gb|EEI60944.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX1330]
Length = 347
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 152/353 (43%), Positives = 207/353 (58%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++FDFDLP IA P+ RD +RL+V+ + D ++ L+ DA+V
Sbjct: 6 LTTEDFDFDLPEELIAQTPLKDRDHSRLLVLDRKTGE---MKDKHFHEIIEELHPGDALV 62
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L ++W +P+K K G + F
Sbjct: 63 MNNTRVLPARLYGEK----PDTGAHLEVLLLTNTEGDTWETLIKPAKRAKVGTRISF--- 115
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A V ++ G ++ F GI LE SL G +PLPPYI + D Y
Sbjct: 116 -GDGRLQAVVKEELEHGGRIIDFEYEGIFLEILESL-GEMPLPPYIKER----LEDPDRY 169
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + + G+++ ++TLHVG GTF PV V+ ++H M
Sbjct: 170 QTVYAKENGSAAAPTAGLHFTKELLDEIEAKGVELVYLTLHVGLGTFRPVSVDKIEEHHM 229
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A+ LN V+ GG+IV+VGTTS+R LET T+ +G I SG+T+IFITP
Sbjct: 230 HSEFYRLTEEAAERLNQVRKNGGKIVAVGTTSIRTLETIGTKFNGEIKADSGWTDIFITP 289
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+ V+ +NFHLPKSTL+MLVSAF G E T YQHAI YRF+S+GD
Sbjct: 290 GYEFKVVEAFSTNFHLPKSTLVMLVSAFAGRELTLSAYQHAIDERYRFFSFGD 342
>gi|116333839|ref|YP_795366.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus brevis ATCC 367]
gi|122269474|sp|Q03R37|QUEA_LACBA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|116099186|gb|ABJ64335.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Lactobacillus brevis ATCC 367]
Length = 344
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 146/355 (41%), Positives = 214/355 (60%), Gaps = 17/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FD+DLP IA P+ RD++RL+V+ + + D D+ L++ DA+V N
Sbjct: 5 LDDFDYDLPHELIAQTPIKQRDTSRLLVLDHQANT---LEDKHFYDILDELHAGDAVVMN 61
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
N++V+ A+L G++ + L V + W +P+K ++ G + F G
Sbjct: 62 NSRVMPARLYGIK----PETGGHVEVLLLHNVEGDVWETLMKPAKRLRVGTTVTF----G 113
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+L ATV ++ G L+ F GI +E + +G PLPPYI K +D D YQT
Sbjct: 114 DGQLTATVTEEREDGIRLIEFHYDGIFMEI-LEQLGETPLPPYIKEK--LDDPDR--YQT 168
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YAK GS AAPTAGLH+T LL ++ + G+K+ ++TLHVG GTF PV+ + +DH MHS
Sbjct: 169 VYAKENGSAAAPTAGLHWTQELLDQVAAKGVKLVYITLHVGLGTFRPVEEANIEDHKMHS 228
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E +D A LN V++ GGRI++ GTTS+R LET T+ G I P SG+T+IFI PGY
Sbjct: 229 EFYRLDEAAAATLNEVRANGGRIIATGTTSIRTLETIGTKFKGEIKPDSGWTDIFIKPGY 288
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+++ V+ ++NFHLPKSTL+MLV+AF G ++ Y HAI YRF+S+GD +
Sbjct: 289 QWQVVNAFITNFHLPKSTLVMLVAAFTGRDQILNAYHHAIEEKYRFFSFGDAMFI 343
>gi|163942168|ref|YP_001647052.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
weihenstephanensis KBAB4]
gi|226713834|sp|A9VIP4|QUEA_BACWK RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|163864365|gb|ABY45424.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Bacillus
weihenstephanensis KBAB4]
Length = 350
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 151/353 (42%), Positives = 207/353 (58%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L D +V
Sbjct: 1 MDINLFDFHLPEELIAQIPLEERETSRLMVLDRETGD---IEHKHFADILSYLQEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLIKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT I + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 111 -GEGKLKATCIGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+ + F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVGLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT G + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKEDGGRIITVGTTSTRTLETIATDHSGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFSNRDNVLHAYNEAVKEKYRFFSFGD 337
>gi|15673557|ref|NP_267731.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Lactococcus
lactis subsp. lactis Il1403]
gi|13878678|sp|Q9CFA6|QUEA_LACLA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|12724579|gb|AAK05673.1|AE006388_4 S-adenosylmethionine tRNA ribosyltransferase [Lactococcus lactis
subsp. lactis Il1403]
gi|326407043|gb|ADZ64114.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Lactococcus
lactis subsp. lactis CV56]
Length = 345
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 150/361 (41%), Positives = 212/361 (58%), Gaps = 17/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA P+ R +RL+++ P + D ++ L + DA+V
Sbjct: 1 MNINDFDFDLPEELIAQTPLEKRSESRLLILDPKTEE---LEDRHFYNIIDELEAGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L+G R I L + N W A+P++ +K G+ + F
Sbjct: 58 LNNTRVLPARLHGER----AETGGHIELLLLKDMGQNRWETLAKPARKMKVGEEVVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A V++ + G ++ F GI LE SL G +PLPPYI + +D Y
Sbjct: 111 -GDGRLKAVVVEVLDHGGRIVEFKYDGIFLEILESL-GEMPLPPYIHEQ----LQDQERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +AK GS AAPTAGLH+T LL ++ G+K+ +TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVFAKENGSAAAPTAGLHYTPELLEKIADKGVKIVELTLHVGLGTFRPVSVDNVDEHQM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L +VK+ G +IV+ GTTS+R LET ++ DG I SG+T+IFI P
Sbjct: 225 HSEFYRLTEEAAAQLRAVKASGHKIVASGTTSIRTLETIGSKFDGDIQADSGWTDIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY ++ VD +NFHLPKSTL+MLV+AF G + YQHAI YRF+S+GD + K
Sbjct: 285 GYEWKVVDAFNTNFHLPKSTLVMLVAAFAGRDFVLDAYQHAIDEKYRFFSFGDAMFVRPK 344
Query: 360 R 360
+
Sbjct: 345 K 345
>gi|238020815|ref|ZP_04601241.1| hypothetical protein GCWU000324_00705 [Kingella oralis ATCC 51147]
gi|237867795|gb|EEP68801.1| hypothetical protein GCWU000324_00705 [Kingella oralis ATCC 51147]
Length = 340
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 156/361 (43%), Positives = 216/361 (59%), Gaps = 29/361 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R ++RL+V P+ P +D +DLP+++N+ D +V
Sbjct: 1 MQLSDFDFTLPEHLIAQNPPATRGNSRLLVALPD--APF--TDKQFADLPSYINAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + +I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMRARLFGQKASG-----GKIEALIERVLDAHTALAHIRSSKSPKAGAALIF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE-----LERQISLVGTIPLPPYIARKRPIDAR 175
DG + AT++++ + L +G E LER G +PLPPYI R DA
Sbjct: 109 DGD--IHATMLERADE---LFKIQFAGEETVYELLERH----GKLPLPPYIVRA--ADAD 157
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT YAK QG+VAAPTAGLHFT LL L + G++ VTLHVGAGTF PV+V++
Sbjct: 158 DDERYQTVYAKFQGAVAAPTAGLHFTDALLGSLKAKGVEFAEVTLHVGAGTFQPVRVDNI 217
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+H MHSE + A T + + K RG ++ SVGTTSLR +E+A G + G T+I
Sbjct: 218 AEHKMHSEWFDVPADTVAKIAAAKQRGSKVWSVGTTSLRAIESA-ARSGSLKAGQGDTDI 276
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPG+ F+ +D L++NFHLPKSTLLMLVSAF G ++ + +Y+HA+ YRF+SYGD +
Sbjct: 277 FITPGFSFQVIDRLITNFHLPKSTLLMLVSAFSGCDKIRAVYRHAVEQEYRFFSYGDAMI 336
Query: 356 L 356
L
Sbjct: 337 L 337
>gi|116493018|ref|YP_804753.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Pediococcus pentosaceus ATCC 25745]
gi|122265518|sp|Q03ER1|QUEA_PEDPA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|116103168|gb|ABJ68311.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Pediococcus pentosaceus ATCC 25745]
Length = 344
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 147/357 (41%), Positives = 208/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++F++DLP IA P+ RD +RL+V+ + D D+ LN DA+V
Sbjct: 3 LTTEDFNYDLPHELIAQTPIKERDESRLLVLDHETGA---MEDKHFYDIIDQLNPGDAVV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN++V+ A++ G++ ++ L + + W +P+K K G + F
Sbjct: 60 MNNSRVMPARIYGIK----DKTGGHFEVLLLHNIEGDRWETLVKPAKRAKTGTKIIF--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L ATV + G +VF GI +E + +G +PLPPYI K R Y
Sbjct: 113 -GDGALTATVTKELEHGGREIVFDYDGIFME-VLEKLGEMPLPPYIKEKLDDPER----Y 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLH+T LL ++ GIK+ ++TLHVG GTF PV ++ +DH M
Sbjct: 167 QTVYSKEPGSAAAPTAGLHWTKELLEKVEQKGIKLVYLTLHVGLGTFRPVDEDNIEDHKM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + +A ALN VK +GGRIV+ GTTS+R LET ++ +G I SG+T+IFI P
Sbjct: 227 HSEFYQLSEESAAALNEVKKQGGRIVATGTTSIRTLETIGSKFNGEIKADSGWTDIFIKP 286
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY ++ VD ++NFHLPKSTL+MLV+AF G E YQHAI YRF+S+GD +
Sbjct: 287 GYEWKVVDAFITNFHLPKSTLVMLVAAFTGRENILNAYQHAIEEKYRFFSFGDAMFI 343
>gi|15903316|ref|NP_358866.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae R6]
gi|307068069|ref|YP_003877035.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase
[Streptococcus pneumoniae AP200]
gi|15458913|gb|AAL00077.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae R6]
gi|306409606|gb|ADM85033.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase (queuine
synthetase) [Streptococcus pneumoniae AP200]
Length = 346
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 209/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ H + D+ L DA+V
Sbjct: 5 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETGEMQDKHFHSIIDM---LEPGDALV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 62 MNDTRVLPARLYGQKV----ETGSHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F I LE SL G +PLPPYI K +D R+ Y
Sbjct: 115 -GDGRLSAVVTEELTHGGRIVRFEYQRIFLEVLESL-GEMPLPPYIHEK--LDDRE--RY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 169 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 229 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y H+I YRF+S+GD ++
Sbjct: 289 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHSIQEHYRFFSFGDAMFIY 346
>gi|293567788|ref|ZP_06679129.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium E1071]
gi|291589373|gb|EFF21180.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium E1071]
Length = 343
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 207/356 (58%), Gaps = 23/356 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++FDFDLP IA P+ RD +RL+V+ + D ++ L DA+V
Sbjct: 2 LTTEDFDFDLPEELIAQTPLKDRDHSRLLVLDRKTGE---MEDKHFHEIIEELQPGDALV 58
Query: 61 FNNTKVITAQLNGVR---FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
NNT+V+ A+L G + H+ L ++W +P+K K G + F
Sbjct: 59 MNNTRVLPARLYGEKPDTGAHLE-------VLLLTNTQGDTWETLIKPAKRAKVGTRISF 111
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
G RL+A V ++ G ++ F GI LE SL G +PLPPYI + D
Sbjct: 112 ----GDGRLQAVVKEELEHGGRIIDFEYEGIFLEILESL-GEMPLPPYIKER----LEDP 162
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YAK GS AAPTAGLHFT LL + + G+++ ++TLHVG GTF PV V+ ++
Sbjct: 163 DRYQTVYAKENGSAAAPTAGLHFTKELLDEIEAKGVELVYLTLHVGLGTFRPVSVDKIEE 222
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIF 296
H MHSE + A+ LN V+ GG+IV+VGTTS+R LET T+ +G I SG+T+IF
Sbjct: 223 HHMHSEFYRLTEEAAERLNQVRKNGGKIVAVGTTSIRTLETIGTKFNGEIRADSGWTDIF 282
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
ITPGY F+ V+ +NFHLPKSTL+MLVSAF G E T YQHAI YRF+S+GD
Sbjct: 283 ITPGYEFKVVEAFSTNFHLPKSTLVMLVSAFAGRELTLSAYQHAIEERYRFFSFGD 338
>gi|229135242|ref|ZP_04264040.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus BDRD-ST196]
gi|228648220|gb|EEL04257.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus BDRD-ST196]
Length = 354
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 151/353 (42%), Positives = 208/353 (58%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 5 MDINLFDFHLPEELIAQIPLEDRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 62 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLIKPAKRVKEGTVISF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT I + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 115 -GEGKLKATCIGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+ + F+TLHVG GTF PV + ++H M
Sbjct: 169 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVGLAFITLHVGLGTFRPVSADTIEEHHM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT G + SG+T+IF+ P
Sbjct: 229 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHSGKLCAASGWTDIFMYP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 289 GYEFKAIDGLITNFHLPKSTLIMLVSAFSNRDNVLHAYNEAVKEKYRFFSFGD 341
>gi|281492155|ref|YP_003354135.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Lactococcus
lactis subsp. lactis KF147]
gi|281375826|gb|ADA65320.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Lactococcus
lactis subsp. lactis KF147]
Length = 345
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 150/361 (41%), Positives = 212/361 (58%), Gaps = 17/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA P+ R +RL+++ P + D ++ L + DA+V
Sbjct: 1 MNINDFDFDLPEELIAQTPLEKRSESRLLILDPKTEE---LEDRHFYNIIDELETGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L+G R I L + N W A+P++ +K G+ + F
Sbjct: 58 LNNTRVLPARLHGER----AETGGHIELLLLKDMGQNRWETLAKPARKMKVGEEVVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A V++ + G ++ F +GI LE SL G +PLPPYI + D Y
Sbjct: 111 -GDGRLKAVVVEVLDHGGRIVEFKYNGIFLEILESL-GEMPLPPYIHEQ----LEDQERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +AK GS AAPTAGLH+T LL ++ G+K+ +TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVFAKENGSAAAPTAGLHYTPELLEKIADKGVKIVELTLHVGLGTFRPVSVDNVDEHQM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L +VK+ G +IV+ GTTS+R LET ++ DG I SG+T+IFI P
Sbjct: 225 HSEFYRLTEEAAAQLRAVKASGHKIVASGTTSIRTLETIGSKFDGDIQADSGWTDIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY ++ VD +NFHLPKSTL+MLV+AF G + YQHAI YRF+S+GD + K
Sbjct: 285 GYEWKVVDAFNTNFHLPKSTLVMLVAAFAGRDFVLDAYQHAIDEKYRFFSFGDAMFVRPK 344
Query: 360 R 360
+
Sbjct: 345 K 345
>gi|297207639|ref|ZP_06924074.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus ATCC 51811]
gi|296887656|gb|EFH26554.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus ATCC 51811]
Length = 347
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 150/355 (42%), Positives = 211/355 (59%), Gaps = 18/355 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHL-VSDLPAFLNSNDAIVF 61
++EFD+DLP S IA P+ RD +RL+V+ HL D+ + D +V
Sbjct: 9 IEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETGE----MKHLHFKDIIEYFRPGDTLVL 64
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 65 NDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF---- 116
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI K +D D YQ
Sbjct: 117 GNGKIIAECIKEMDQGGRIMRLHYEGI-LQERLDELGEMPLPPYI--KERLDDPDR--YQ 171
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YAK GS AAPTAGLHFT LL+ + + G+ + FVTLHVG GTF PV V+D +DH MH
Sbjct: 172 TVYAKESGSAAAPTAGLHFTDELLTEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHEMH 231
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
SE + TA LN KS+G RI+SVGTTS R LET + SG+TNIFI PG+
Sbjct: 232 SEYYQMTQETADLLNDTKSKGHRIISVGTTSTRTLETIRRDHDKFVEMSGWTNIFIYPGF 291
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 292 DFKAIDGQITNFHLPKSTLVMLVSAFSTRENVLNAYKTAVNLEYRFFSFGDAMLI 346
>gi|323440807|gb|EGA98516.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus O11]
gi|323442844|gb|EGB00469.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus O46]
Length = 341
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 151/357 (42%), Positives = 212/357 (59%), Gaps = 18/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHL-VSDLPAFLNSNDAI 59
M ++EFD+DLP S IA P+ RD +RL+V+ HL D+ + D +
Sbjct: 1 MNIEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETGE----MKHLHFKDIIEYFRPGDTL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 57 VLNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI K +D D
Sbjct: 111 --GNGKIIAECIKEMDQGGRIMRLHYEGI-LQERLDELGEMPLPPYI--KERLDDPDR-- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT LL+ + + G+ + FVTLHVG GTF PV V+D +DH
Sbjct: 164 YQTVYAKESGSAAAPTAGLHFTDELLTEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHE 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE + TA LN KS+G RI+SVGTTS R LET + SG+TNIFI P
Sbjct: 224 MHSEYYQMTQETADLLNDTKSKGHRIISVGTTSTRTLETIRRDYDKFVETSGWTNIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
G+ F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 284 GFDFKAIDGQITNFHLPKSTLVMLVSAFSTRENVLNAYKTAVNLEYRFFSFGDAMLI 340
>gi|220927982|ref|YP_002504891.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
cellulolyticum H10]
gi|219998310|gb|ACL74911.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Clostridium
cellulolyticum H10]
Length = 340
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 153/361 (42%), Positives = 203/361 (56%), Gaps = 27/361 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+ LP IA P+ RD +RLMV+ I L DL +L+ D +V
Sbjct: 1 MNLHDFDYYLPEELIAQHPLEKRDMSRLMVLDKQTG---EIEHKLFKDLFNYLDEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKE-----ISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
NNT+VI A+L G EKE I L RV ++W V RP K K G
Sbjct: 58 LNNTRVIPARLLG---------EKEGTGGKIEFVLLKRVEGDNWEVILRPGKKAKPGSKF 108
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
F G L+A +++ + G L+ F G+ E + VG +PLPPYI K R
Sbjct: 109 VF----GNGELKAEILEVLDEGNRLVRFIYDGV-FEEILDRVGVMPLPPYITEKLDNPER 163
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
YQT YAK+ GS AAPTAGLHFT LL L+ G+K+ +V LHVG GTF PVKV+D
Sbjct: 164 ----YQTVYAKVNGSAAAPTAGLHFTKELLDSLVHKGVKIAYVMLHVGLGTFRPVKVDDI 219
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
H MHSE I T +N + +G ++V+VGTTS R+LET ++G I P G+T+I
Sbjct: 220 TQHKMHSEYYSISQETCDIINVTREKGKKVVAVGTTSCRVLET-IGKNGKIAPCDGWTDI 278
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGY F+ VD L++NFHLP+STL+MLVS+ G + Y A+ YRF+S+GD
Sbjct: 279 FIYPGYEFKVVDRLITNFHLPESTLIMLVSSLAGRDNVLHAYSVAVEEKYRFFSFGDAMF 338
Query: 356 L 356
+
Sbjct: 339 I 339
>gi|57650521|ref|YP_186534.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus COL]
gi|87162434|ref|YP_494291.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus USA300_FPR3757]
gi|88195451|ref|YP_500255.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus NCTC 8325]
gi|151221754|ref|YP_001332576.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus str. Newman]
gi|161509866|ref|YP_001575525.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus USA300_TCH1516]
gi|221141091|ref|ZP_03565584.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus str. JKD6009]
gi|258450534|ref|ZP_05698596.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A5948]
gi|262051290|ref|ZP_06023514.1| S-adenosylmethionine tRNA ribosyltransferase [Staphylococcus aureus
930918-3]
gi|282920189|ref|ZP_06327914.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A9765]
gi|284024696|ref|ZP_06379094.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus 132]
gi|294848669|ref|ZP_06789415.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A9754]
gi|71153094|sp|Q5HFC3|QUEA_STAAC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|122539357|sp|Q2FXT5|QUEA_STAA8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|123485522|sp|Q2FG87|QUEA_STAA3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|172048926|sp|A6QHI2|QUEA_STAAE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|189038884|sp|A8Z2G8|QUEA_STAAT RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|57284707|gb|AAW36801.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus COL]
gi|87128408|gb|ABD22922.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus USA300_FPR3757]
gi|87203009|gb|ABD30819.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus NCTC 8325]
gi|150374554|dbj|BAF67814.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus str. Newman]
gi|160368675|gb|ABX29646.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus USA300_TCH1516]
gi|257861692|gb|EEV84491.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A5948]
gi|259160927|gb|EEW45947.1| S-adenosylmethionine tRNA ribosyltransferase [Staphylococcus aureus
930918-3]
gi|282594537|gb|EFB99522.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A9765]
gi|294824695|gb|EFG41118.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A9754]
gi|302751468|gb|ADL65645.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus str. JKD6008]
gi|315198659|gb|EFU28987.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus CGS01]
gi|329314314|gb|AEB88727.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus T0131]
gi|329728451|gb|EGG64888.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus 21189]
Length = 341
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 151/357 (42%), Positives = 211/357 (59%), Gaps = 18/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHL-VSDLPAFLNSNDAI 59
M ++EFD+DLP S IA P+ RD +RL+V+ HL D+ + D +
Sbjct: 1 MNIEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETGE----MKHLHFKDIIEYFRPGDTL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 57 VLNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI K +D D
Sbjct: 111 --GNGKIIAECIKEMDQGGRIMRLHYEGI-LQERLDELGEMPLPPYI--KERLDDPDR-- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT LL + + G+ + FVTLHVG GTF PV V+D +DH
Sbjct: 164 YQTVYAKESGSAAAPTAGLHFTDELLIEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHE 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE + TA LN KS+G RI+SVGTTS R LET + SG+TNIFI P
Sbjct: 224 MHSEYYQMTQETADLLNDTKSKGHRIISVGTTSTRTLETIRRDHDKFVETSGWTNIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
G+ F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 284 GFDFKAIDGQITNFHLPKSTLVMLVSAFSSRENVLNAYKTAVNLEYRFFSFGDAMLI 340
>gi|240114895|ref|ZP_04728957.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae PID18]
gi|268600551|ref|ZP_06134718.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae PID18]
gi|268584682|gb|EEZ49358.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae PID18]
Length = 346
Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 152/356 (42%), Positives = 207/356 (58%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P++ + D + DLP ++ + D +V
Sbjct: 1 MDISDFDFTLPEHLIAQHPPEVRGSSRLLVALPDMP----LQDRVFGDLPDYVEAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDSG-----GRIEALIERVLDNHAALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 109 --EGGIRAVMVGR--EGELFCLRFEGGQTVYELLEQNGHLPLPPYI--ERAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + T A+ + K+RG + +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 223 HSEWFEVPSETVAAVEAAKARGNKAWAVGTTSMRALESAARATGYLKDGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF VD L++NFHLPKSTLLMLV AF G+ + +Y+HAI YRF+SYGD +L
Sbjct: 283 YRFNVVDRLVTNFHLPKSTLLMLVGAFSGMGHIRAVYRHAIEREYRFFSYGDAMVL 338
>gi|257887874|ref|ZP_05667527.1| queuosine biosynthesis protein [Enterococcus faecium 1,141,733]
gi|257893327|ref|ZP_05672980.1| queuosine biosynthesis protein [Enterococcus faecium 1,231,408]
gi|257896508|ref|ZP_05676161.1| queuosine biosynthesis protein [Enterococcus faecium Com12]
gi|257899488|ref|ZP_05679141.1| queuosine biosynthesis protein [Enterococcus faecium Com15]
gi|293379287|ref|ZP_06625433.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium PC4.1]
gi|293573018|ref|ZP_06683960.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium E980]
gi|257823928|gb|EEV50860.1| queuosine biosynthesis protein [Enterococcus faecium 1,141,733]
gi|257829706|gb|EEV56313.1| queuosine biosynthesis protein [Enterococcus faecium 1,231,408]
gi|257833073|gb|EEV59494.1| queuosine biosynthesis protein [Enterococcus faecium Com12]
gi|257837400|gb|EEV62474.1| queuosine biosynthesis protein [Enterococcus faecium Com15]
gi|291606920|gb|EFF36300.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium E980]
gi|292642083|gb|EFF60247.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium PC4.1]
Length = 343
Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 152/353 (43%), Positives = 207/353 (58%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++FDFDLP IA P+ RD +RL+V+ + D ++ L+ DA+V
Sbjct: 2 LTTEDFDFDLPEELIAQTPLKDRDHSRLLVLDRKTGE---MKDKHFHEIIEELHPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L ++W +P+K K G + F
Sbjct: 59 MNNTRVLPARLYGEK----PDTGAHLEVLLLTNTEGDTWETLIKPAKRAKVGTRISF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A V ++ G ++ F GI LE SL G +PLPPYI + D Y
Sbjct: 112 -GDGRLQAVVKEELEHGGRIIDFEYEGIFLEILESL-GEMPLPPYIKER----LEDPDRY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + + G+++ ++TLHVG GTF PV V+ ++H M
Sbjct: 166 QTVYAKENGSAAAPTAGLHFTKELLDEIEAKGVELVYLTLHVGLGTFRPVSVDKIEEHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A+ LN V+ GG+IV+VGTTS+R LET T+ +G I SG+T+IFITP
Sbjct: 226 HSEFYRLTEEAAERLNQVRKNGGKIVAVGTTSIRTLETIGTKFNGEIKADSGWTDIFITP 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+ V+ +NFHLPKSTL+MLVSAF G E T YQHAI YRF+S+GD
Sbjct: 286 GYEFKVVEAFSTNFHLPKSTLVMLVSAFAGRELTLSAYQHAIDERYRFFSFGD 338
>gi|330683929|gb|EGG95696.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus epidermidis VCU121]
Length = 341
Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 148/357 (41%), Positives = 213/357 (59%), Gaps = 18/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHL-VSDLPAFLNSNDAI 59
M +++FD+DLP S IA P+ RD +RL+V++ +HL D+ + N D +
Sbjct: 1 MNIEDFDYDLPESLIAQTPLKNRDQSRLLVLNRKNGN----MEHLHFKDVINYFNPGDTL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 57 VLNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNQLNF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G ++ A I++ + G ++ GI L+ ++ +G +PLPPYI K +D D
Sbjct: 111 --GDGKIIAECIEELDQGGRIMRLHYEGI-LQERLDELGEMPLPPYI--KERLDDPDR-- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT LL + + G+ + F+TLHVG GTF PV V++ DDH
Sbjct: 164 YQTVYAKESGSAAAPTAGLHFTDELLESIKAKGVNIAFITLHVGLGTFRPVSVDNIDDHE 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE + TA LN + G RI+SVGTTS R LET + SG+T+IFI P
Sbjct: 224 MHSEYYQMMQETADLLNKTRKNGHRIISVGTTSTRTLETIRRDHSEFVEKSGWTDIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
G+ ++A+D L++NFHLPKSTL+MLVSAF E YQ A+ YRF+S+GD L+
Sbjct: 284 GFEYKAIDGLITNFHLPKSTLVMLVSAFSSREYILNAYQKAVEMEYRFFSFGDAMLI 340
>gi|227513119|ref|ZP_03943168.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus buchneri ATCC 11577]
gi|227083694|gb|EEI19006.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus buchneri ATCC 11577]
Length = 352
Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 144/351 (41%), Positives = 210/351 (59%), Gaps = 17/351 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+++FD+ LP IA P+ RD +RL+V++ + D ++ +LN DA+V N
Sbjct: 13 LEDFDYKLPHELIAQTPIKDRDESRLLVLNKETGD---MQDRRFYNIIDYLNPGDALVMN 69
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
++KV+ A++ GV+ I L + N W +P+K K G ++ F G
Sbjct: 70 DSKVMPARIYGVK----KDTGAHIEVLLLHNIEGNRWETLMKPAKRAKVGTVIDF----G 121
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ +L+A V + + G + F GI +E + +G PLPPYI K R YQT
Sbjct: 122 EGQLQAVVTKELDHGGREIEFKYEGIFIE-ILERLGETPLPPYIKEKLDDPNR----YQT 176
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YAK GS AAPTAGLH+T LL ++ G+ + ++TLHVG GTF PV+ ++ +DH MHS
Sbjct: 177 VYAKEMGSAAAPTAGLHWTKELLQKVADKGVHLVYLTLHVGLGTFRPVEEDNIEDHKMHS 236
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + ++ LN V+ GG+IV+ GTTS+R LET T+ +G I P SG+T+IFI PGY
Sbjct: 237 EFYRLSEEASKTLNDVRKNGGKIVATGTTSIRTLETVGTKFNGEIRPDSGWTDIFIKPGY 296
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+++ VD ++NFHLPKSTL+MLV++F G E YQHAIS YRF+S+GD
Sbjct: 297 QWQVVDSFITNFHLPKSTLVMLVASFTGRENILNAYQHAISEKYRFFSFGD 347
>gi|255526661|ref|ZP_05393566.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Clostridium
carboxidivorans P7]
gi|296187166|ref|ZP_06855563.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
carboxidivorans P7]
gi|255509641|gb|EET85976.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Clostridium
carboxidivorans P7]
gi|296048201|gb|EFG87638.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
carboxidivorans P7]
Length = 341
Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 145/356 (40%), Positives = 198/356 (55%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDF LP IA P+ RD ARLM++ N I + D+ +L D +V
Sbjct: 1 MKVTDFDFYLPEELIAQCPLEKRDEARLMLLDKNTG---EIEHKIFKDIIDYLEPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + +I L R+ + W +P K + G F
Sbjct: 58 LNDTRVLPARLIGSK----ENTGGKIEFLLLKRIDKDKWETLVKPGKRAQVGTRFVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A V+ G ++ F GI E + +G +PLPPYI K D Y
Sbjct: 111 -GDGELKAEVVSVEEDGNRIVKFEYEGI-FEEVLDKLGQMPLPPYIKEK----LEDKEMY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K QGS AAPTAGLHFT LL ++ G+ + F+TLHVG GTF PVKVE+ DH M
Sbjct: 165 QTVYSKEQGSAAAPTAGLHFTEELLKKIEEKGVNIAFLTLHVGLGTFRPVKVENIQDHNM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA +N + G I++VGTTS R LET ++G + SG+T+IFI PG
Sbjct: 225 HSEYYTMSKETADIINKTRKNGKSIIAVGTTSCRTLETIGNDEGEVREQSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+++ VD L++NFHLP+STL+MLVSA G E Y A+ YRF+S+GD +
Sbjct: 285 YKYKMVDKLITNFHLPESTLIMLVSALAGRENVMNAYDTAVKERYRFFSFGDAMFI 340
>gi|239998177|ref|ZP_04718101.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae 35/02]
gi|240015804|ref|ZP_04722344.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae FA6140]
gi|240079942|ref|ZP_04724485.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae FA19]
gi|240112149|ref|ZP_04726639.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae MS11]
gi|240117099|ref|ZP_04731161.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae PID1]
gi|240122734|ref|ZP_04735690.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae PID332]
gi|240124926|ref|ZP_04737812.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae SK-92-679]
gi|240127437|ref|ZP_04740098.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae SK-93-1035]
gi|254492954|ref|ZP_05106125.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae 1291]
gi|260441289|ref|ZP_05795105.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae DGI2]
gi|268594029|ref|ZP_06128196.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae 35/02]
gi|268596081|ref|ZP_06130248.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae FA19]
gi|268598206|ref|ZP_06132373.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae MS11]
gi|268602784|ref|ZP_06136951.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae PID1]
gi|268681333|ref|ZP_06148195.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae PID332]
gi|268683504|ref|ZP_06150366.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae SK-92-679]
gi|268685810|ref|ZP_06152672.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae SK-93-1035]
gi|226511994|gb|EEH61339.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae 1291]
gi|268547418|gb|EEZ42836.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae 35/02]
gi|268549869|gb|EEZ44888.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae FA19]
gi|268582337|gb|EEZ47013.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae MS11]
gi|268586915|gb|EEZ51591.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae PID1]
gi|268621617|gb|EEZ54017.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae PID332]
gi|268623788|gb|EEZ56188.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae SK-92-679]
gi|268626094|gb|EEZ58494.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae SK-93-1035]
Length = 346
Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 152/356 (42%), Positives = 207/356 (58%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P++ + D + DLP ++ + D +V
Sbjct: 1 MDISDFDFTLPEHLIAQHPPEVRGSSRLLVALPDMP----LQDRVFGDLPDYVEAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDSG-----GRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 109 --EGGIRAVMVGR--EGELFCLRFEGGQTVYELLEQNGHLPLPPYI--ERAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + T A+ + K+RG + +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 223 HSEWFEVPSETVAAVEAAKARGNKAWAVGTTSMRALESAARATGYLKDGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF VD L++NFHLPKSTLLMLV AF G+ + +Y+HAI YRF+SYGD +L
Sbjct: 283 YRFNVVDRLVTNFHLPKSTLLMLVGAFSGMGHIRAVYRHAIEREYRFFSYGDAMVL 338
>gi|82751238|ref|YP_416979.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus RF122]
gi|82656769|emb|CAI81198.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus RF122]
Length = 354
Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 150/355 (42%), Positives = 211/355 (59%), Gaps = 18/355 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHL-VSDLPAFLNSNDAIVF 61
++EFD+DLP S IA P+ RD +RL+V+ HL D+ + D +V
Sbjct: 16 IEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETGE----MKHLHFKDIIEYFRPGDTLVL 71
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 72 NDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF---- 123
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI K +D D YQ
Sbjct: 124 GNGKIIAECIKEMDQGGRIMRLHYEGI-LQERLDELGEMPLPPYI--KERLDDPDR--YQ 178
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YAK GS AAPTAGLHFT LL+ + + G+ + FVTLHVG GTF PV V+D +DH MH
Sbjct: 179 TVYAKESGSAAAPTAGLHFTDELLTEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHEMH 238
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
SE + TA LN KS+G RI+SVGTTS R LET + SG+TNIFI PG+
Sbjct: 239 SEYYQMTQETADLLNDTKSKGHRIISVGTTSTRTLETIRRDHDKFVETSGWTNIFIYPGF 298
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 299 DFKAIDGQITNFHLPKSTLVMLVSAFSTRENVLNAYKTAVNLEYRFFSFGDAMLI 353
>gi|325131502|gb|EGC54209.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis M6190]
gi|325137548|gb|EGC60130.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis ES14902]
Length = 346
Score = 262 bits (670), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 151/356 (42%), Positives = 207/356 (58%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P++ + D + DLP ++ + D +V
Sbjct: 1 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPDMP----MQDRVFGDLPDYVEAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDSG-----GRIEALIERVLDSHTALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 109 --EGGIRAVMVGR--EGELFCLRFEGGQTVYELLEQNGHLPLPPYI--ERAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+VE ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVEKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + T A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 223 HSEWFEVPSETVAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF D L++NFHLPKSTLLMLVSAF G+ + Y++A+ YRF+SYGD +L
Sbjct: 283 YRFNVADRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGDAMIL 338
>gi|149183133|ref|ZP_01861583.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
sp. SG-1]
gi|148849165|gb|EDL63365.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
sp. SG-1]
Length = 342
Score = 262 bits (670), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 151/358 (42%), Positives = 209/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDF LP IA P+ R +RLM + + D+ FL D +V
Sbjct: 1 MKVEDFDFHLPEELIAQTPLEKRSESRLMAIDRESGN---LQHKKFKDITDFLKEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L GV+ +I L + + W +P+K +K G + F
Sbjct: 58 LNDTRVLPARLFGVK----EETGAKIEVLLLKQEEGDKWETLIKPAKRVKVGTKISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L A + + G +L F GI E + +G +PLPPYI+ K +D +D Y
Sbjct: 111 -GEGKLTALCTGEKDQGGRILEFHYEGIFYE-VLDELGEMPLPPYISEK--LDDQDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +GS AAPTAGLHFT LL + S G+ V F+TLHVG GTF PV V+ ++H M
Sbjct: 165 QTVFARERGSAAAPTAGLHFTEELLDEIRSRGVHVAFITLHVGLGTFRPVSVDSIEEHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE I TA+ LN VK GGRI++VGTTS R LET A+ DG SG+T+IFI P
Sbjct: 225 HSEFYQITEGTARLLNEVKESGGRIITVGTTSTRTLETIASKHDGKFVEESGWTDIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY F+A+D L++NFHLPKSTL+MLVSAF + Y+ A+ YRF+S+GD+ L+
Sbjct: 285 GYEFKAIDGLVTNFHLPKSTLIMLVSAFTSRDIILNAYKTAVEEKYRFFSFGDSMLIL 342
>gi|331266082|ref|YP_004325712.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus oralis Uo5]
gi|326682754|emb|CBZ00371.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus oralis Uo5]
Length = 346
Score = 262 bits (670), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 150/358 (41%), Positives = 209/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 5 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETGE---MKDKHFHSIIDMLEPGDALV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G ++F
Sbjct: 62 MNDTRVLPARLYGQK----EETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGSRVNF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A + ++ G ++ F GI LE SL G +PLPPYI K +D R+ Y
Sbjct: 115 -GDGRLSAVITEELTHGGRIVRFEYQGIFLEVLESL-GEMPLPPYIHEK--LDDRER--Y 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 169 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK G R+++VGTTS+R LET ++ +G I SG+TNIFI P
Sbjct: 229 HSEFYQLSEEAAATLRSVKENGSRVIAVGTTSIRTLETIGSKFNGQIQADSGWTNIFIKP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G + Y HAI YRF+S+GD ++
Sbjct: 289 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRDLVLDAYHHAIQERYRFFSFGDAMFIY 346
>gi|257793713|ref|ZP_05642692.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A9781]
gi|258410988|ref|ZP_05681268.1| S-adenosylmethioninetRNA ribosyltransferase-isomerase
[Staphylococcus aureus A9763]
gi|258420211|ref|ZP_05683166.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A9719]
gi|300911722|ref|ZP_07129165.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus TCH70]
gi|257787685|gb|EEV26025.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A9781]
gi|257840138|gb|EEV64602.1| S-adenosylmethioninetRNA ribosyltransferase-isomerase
[Staphylococcus aureus A9763]
gi|257843922|gb|EEV68316.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A9719]
gi|300885968|gb|EFK81170.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus TCH70]
Length = 347
Score = 262 bits (670), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 150/355 (42%), Positives = 211/355 (59%), Gaps = 18/355 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHL-VSDLPAFLNSNDAIVF 61
++EFD+DLP S IA P+ RD +RL+V+ HL D+ + D +V
Sbjct: 9 IEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETGE----MKHLHFKDIIEYFRPGDTLVL 64
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 65 NDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF---- 116
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI K +D D YQ
Sbjct: 117 GNGKIIAECIKEMDQGGRIMRLHYEGI-LQERLDELGEMPLPPYI--KERLDDPDR--YQ 171
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YAK GS AAPTAGLHFT LL+ + + G+ + FVTLHVG GTF PV V+D +DH MH
Sbjct: 172 TVYAKESGSAAAPTAGLHFTDELLTEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHEMH 231
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
SE + TA LN KS+G RI+SVGTTS R LET + SG+TNIFI PG+
Sbjct: 232 SEYYQMTQETADLLNDTKSKGHRIISVGTTSTRTLETIRRDHDKFVETSGWTNIFIYPGF 291
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 292 DFKAIDGQITNFHLPKSTLVMLVSAFSTRENVLNAYKTAVNLEYRFFSFGDAMLI 346
>gi|299144018|ref|ZP_07037098.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Peptoniphilus sp. oral taxon 386 str. F0131]
gi|298518503|gb|EFI42242.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Peptoniphilus sp. oral taxon 386 str. F0131]
Length = 340
Score = 262 bits (670), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 147/357 (41%), Positives = 211/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F+++LP IA P+ RD +RL+V+ N ++ H D+ +L + D +V
Sbjct: 1 MKTRDFNYELPKELIAQHPLENRDYSRLLVL--NRLTGDIVHKHFY-DIYDYLKTGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A++ G R I+R+E I L ++ ++W +P K K G + FFS+
Sbjct: 58 LNNTRVMPARIFGSR---IDRQE-HIEFLLLKKIEKDTWECLCKPGKKAKVGTKI-FFSE 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
RL ++D G ++ F GI E + +G +PLPPYI K D Y
Sbjct: 113 ----RLNGEIVDVLEDGNRIIKFIYEGI-FEEILDELGEMPLPPYITEK----LEDRERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+KI GS AAPTAGLHFT LL +L G+K+ +VTLHVG GTF PVK +D +H M
Sbjct: 164 QTVYSKIDGSAAAPTAGLHFTKELLEKLEDKGVKIVYVTLHVGLGTFRPVKSDDIFNHHM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I TA +N K RIV+VGTTS+R LE+ + G++ +G+T+IFI PG
Sbjct: 224 HSEYYEICKDTADEINKAKIENRRIVAVGTTSIRTLESCADDKGMVKESNGWTDIFIHPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ VD L++NFHLP+STL+MLVSAF Y+ A+ YRF+S+GD ++
Sbjct: 284 YKFKCVDALITNFHLPESTLVMLVSAFATRSMILNTYEIAVKEKYRFFSFGDAMFIY 340
>gi|298694919|gb|ADI98141.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus ED133]
Length = 354
Score = 262 bits (670), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 150/355 (42%), Positives = 211/355 (59%), Gaps = 18/355 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHL-VSDLPAFLNSNDAIVF 61
++EFD+DLP S IA P+ RD +RL+V+ HL D+ + D +V
Sbjct: 16 IEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETGE----MKHLHFKDIIEYFRPGDTLVL 71
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 72 NDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF---- 123
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI K +D D YQ
Sbjct: 124 GNGKIIAECIKEMDQGGRIMRLHYEGI-LQERLDELGEMPLPPYI--KERLDDPDR--YQ 178
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YAK GS AAPTAGLHFT LL+ + + G+ + FVTLHVG GTF PV V+D +DH MH
Sbjct: 179 TVYAKESGSAAAPTAGLHFTDELLTEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHEMH 238
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
SE + TA LN KS+G RI+SVGTTS R LET + SG+TNIFI PG+
Sbjct: 239 SEYYQMAQETADLLNDTKSKGHRIISVGTTSTRTLETIRRDHDKFVETSGWTNIFIYPGF 298
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 299 DFKAIDGQITNFHLPKSTLVMLVSAFSTRENVLNAYKTAVNLEYRFFSFGDAMLI 353
>gi|294668511|ref|ZP_06733608.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
elongata subsp. glycolytica ATCC 29315]
gi|291309474|gb|EFE50717.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
elongata subsp. glycolytica ATCC 29315]
Length = 347
Score = 262 bits (670), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 157/359 (43%), Positives = 211/359 (58%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA +P R ++RL+ P S + D + S LP D +V
Sbjct: 1 MQLSDFDFDLPEHLIAQQPPAERGASRLLSALPGES----LRDEMFSVLPQLAGRGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + +I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKTSG-----GKIEALIERVLDAHTALAHIRSSKSPKPGTRLLF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DG E T GE+ + + R + G +PLPPYI +R D D Y
Sbjct: 109 DGGIGAEMTA----REGELFRLHFDGEETVYRLLEQHGQLPLPPYI--ERAADGDDESRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL+ L + G+++ VTLHVGAGTF PV+ E+ +H M
Sbjct: 163 QTVYAKHQGAVAAPTAGLHFTDTLLAELKAKGVRLAEVTLHVGAGTFQPVRTENIAEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + T A+ + K+ G ++ +VGTTS+R LE+A E G + G T+IFITPG
Sbjct: 223 HSEWYDVPPETVAAVEAAKAEGAKVWAVGTTSMRALESAARETGRLKAGRGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRFR D L++NFHLPKSTLLMLVSAF GIEE + +Y+HA++ YRF+SYGD +L +K
Sbjct: 283 YRFRVADRLITNFHLPKSTLLMLVSAFSGIEEIRAVYRHAVAKEYRFFSYGDAMVLGRK 341
>gi|253732296|ref|ZP_04866461.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|253733109|ref|ZP_04867274.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus TCH130]
gi|282908959|ref|ZP_06316777.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus WW2703/97]
gi|282911276|ref|ZP_06319078.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus WBG10049]
gi|297590817|ref|ZP_06949455.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus MN8]
gi|253724085|gb|EES92814.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|253728865|gb|EES97594.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus TCH130]
gi|282324971|gb|EFB55281.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus WBG10049]
gi|282327223|gb|EFB57518.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus WW2703/97]
gi|297575703|gb|EFH94419.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus MN8]
gi|312437893|gb|ADQ76964.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus TCH60]
Length = 347
Score = 262 bits (670), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 150/355 (42%), Positives = 211/355 (59%), Gaps = 18/355 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHL-VSDLPAFLNSNDAIVF 61
++EFD+DLP S IA P+ RD +RL+V+ HL D+ + D +V
Sbjct: 9 IEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETGE----MKHLHFKDIIEYFRPGDTLVL 64
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 65 NDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF---- 116
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI K +D D YQ
Sbjct: 117 GNGKIIAECIKEMDQGGRIMRLHYEGI-LQERLDELGEMPLPPYI--KERLDDPDR--YQ 171
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YAK GS AAPTAGLHFT LL+ + + G+ + FVTLHVG GTF PV V+D +DH MH
Sbjct: 172 TVYAKESGSAAAPTAGLHFTDELLTEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHEMH 231
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
SE + TA LN KS+G RI+SVGTTS R LET + SG+TNIFI PG+
Sbjct: 232 SEYYQMTQETADLLNDTKSKGHRIISVGTTSTRTLETIRRDHDKFVETSGWTNIFIYPGF 291
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 292 DFKAIDGQITNFHLPKSTLVMLVSAFSTRENVLNAYKTAVNLEYRFFSFGDAMLI 346
>gi|325127517|gb|EGC50443.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis N1568]
Length = 346
Score = 262 bits (670), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 152/356 (42%), Positives = 208/356 (58%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P++ PL D + DLP ++ + D +V
Sbjct: 1 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPDM--PL--QDRVFGDLPDYVEAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDSG-----GRIEALIERVLDSHTALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 109 --EGGIRAVMVGR--EGELFCLRFEGGETVYELLEQNGHLPLPPYI--ERAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF P++V+ ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPMRVDKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + T A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 223 HSEWFEVPSETVAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF D L++NFHLPKSTLLMLVSAF G+ + Y+HA+ YRF+SYGD +L
Sbjct: 283 YRFNVADRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRHAVEREYRFFSYGDAMIL 338
>gi|125623767|ref|YP_001032250.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Lactococcus
lactis subsp. cremoris MG1363]
gi|166216729|sp|A2RJR5|QUEA_LACLM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|124492575|emb|CAL97520.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Lactococcus
lactis subsp. cremoris MG1363]
gi|300070536|gb|ADJ59936.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Lactococcus
lactis subsp. cremoris NZ9000]
Length = 346
Score = 262 bits (670), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 150/360 (41%), Positives = 209/360 (58%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA P+ R +RL+++ P + D D+ L + DA+V
Sbjct: 1 MNINDFDFDLPEELIAQTPLEKRSESRLLILDPKTEE---LEDRHFYDIIDELEAGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L+G R I L + N W A+P++ +K G+ + F
Sbjct: 58 LNNTRVLPARLHGER----AETGGHIELLLLKDMGENRWETLAKPARKMKVGEEVVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A V++ G ++ F GI LE SL G +PLPPYI + D Y
Sbjct: 111 -GDGRLKAVVVEILEHGGRIVEFKYDGIFLEILESL-GEMPLPPYIHEQ----LEDQERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +AK GS AAPTAGLH+T LL ++ G+K+ +TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVFAKENGSAAAPTAGLHYTPELLEKIADKGVKIVELTLHVGLGTFRPVSVDNVDEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L +VK+ G +I + GTTS+R LET ++ DG I SG+T+IFI P
Sbjct: 225 HSEFYRLTEEAAAQLRAVKASGHKIFASGTTSIRTLETIGSKFDGDIQADSGWTDIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY ++ VD +NFHLPKSTL+MLV+AF G + + YQHAI YRF+S+GD + K
Sbjct: 285 GYEWKVVDAFNTNFHLPKSTLVMLVAAFAGRDFVLEAYQHAIDEKYRFFSFGDAMFVRSK 344
>gi|86606142|ref|YP_474905.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus sp. JA-3-3Ab]
gi|86554684|gb|ABC99642.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus sp. JA-3-3Ab]
Length = 396
Score = 262 bits (670), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 146/371 (39%), Positives = 209/371 (56%), Gaps = 20/371 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
++ +D+ LPP RIA PV PRD AR++VV+P+ DLP +L + D +V
Sbjct: 31 LLTASYDYSLPPERIAQAPVEPRDQARMLVVYPDRH-----EHRRFCDLPDYLQAGDLLV 85
Query: 61 FNNTKVITAQLNGVR-FCHINRREKEISCTLHMRVSPNS------WSVYARPSKVIKKGD 113
N+TKVI A+L G + + + L + N+ W V RP K +K GD
Sbjct: 86 LNDTKVIPARLWGAKVLPGKDASGARVEVLLLEPIPANTSKQEQIWRVLVRPGKRVKVGD 145
Query: 114 ILHFFSQDGQ-SRLEATV--IDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKR 170
+ F+ + G + L ATV +D G ++ + E+ + VG IPLPPY+
Sbjct: 146 QIRFWDRQGSPAELGATVLAVDAETGGRVVQLTWEGADTFEQILGRVGRIPLPPYLKAAH 205
Query: 171 PIDARDY----VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGT 226
+D DYQT +A+ GSVAA TAGLHFT LL RL GI+ ++TL++G GT
Sbjct: 206 ALDPTSAGVRPEDYQTVWARHPGSVAASTAGLHFTPQLLERLAQKGIQTAYITLNIGLGT 265
Query: 227 FMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII 286
F PV+ E DH +HSE + A T + +++G R+++VGTT +R LETA G +
Sbjct: 266 FRPVEAERVTDHRLHSEWLKVPAETVATIRETQAQGRRVIAVGTTVVRALETAAL-CGTL 324
Query: 287 NPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYR 346
PW G +++FI PGY +R V L++NFHLP+S+L+MLV+A G E +YQ AI YR
Sbjct: 325 QPWQGKSDLFIYPGYSWRVVQGLITNFHLPRSSLMMLVAALIGRERLLDLYQEAIREGYR 384
Query: 347 FYSYGDTSLLF 357
FYS+GD L+
Sbjct: 385 FYSFGDGMLIL 395
>gi|223044117|ref|ZP_03614156.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus capitis SK14]
gi|222442511|gb|EEE48617.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus capitis SK14]
Length = 341
Score = 262 bits (670), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 149/357 (41%), Positives = 211/357 (59%), Gaps = 18/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHL-VSDLPAFLNSNDAI 59
M ++EFD+ LP S IA P+ RD +RL+V+ HL D+ +LN D +
Sbjct: 1 MNIEEFDYHLPESLIAQTPLKNRDQSRLLVLQRETGK----MTHLHFKDVIDYLNPGDTL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L F
Sbjct: 57 VLNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNRLSF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G ++ A I + G ++ GI L+ ++ +G +PLPPYI K +D D
Sbjct: 111 --GDGKIVAECIKELEQGGRIMRLHYDGI-LQERLDELGEMPLPPYI--KERLDDPDR-- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT +LL+++ G+ + F+TLHVG GTF PV V++ DDH
Sbjct: 164 YQTVYAKESGSAAAPTAGLHFTDDLLNQIKQKGVNIAFITLHVGLGTFRPVSVDNIDDHE 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE + TA LN K++G RI+SVGTTS R LET + SG+T+IFI P
Sbjct: 224 MHSEYYQMTQETADLLNQTKAKGKRIISVGTTSTRTLETIRRDHEQFVEKSGWTDIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
G+ ++A+D L++NFHLPKSTL+MLVSAF E Y A+ YRF+S+GD L+
Sbjct: 284 GFEYKAIDGLITNFHLPKSTLVMLVSAFSTRENILNAYHKAVEMEYRFFSFGDAMLI 340
>gi|73542492|ref|YP_297012.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ralstonia
eutropha JMP134]
gi|91207398|sp|Q46XG5|QUEA_RALEJ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|72119905|gb|AAZ62168.1| Queuosine biosynthesis protein [Ralstonia eutropha JMP134]
Length = 349
Score = 262 bits (670), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 151/363 (41%), Positives = 211/363 (58%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVH---PNLSCPLV-ISDHLVSDLPAFLNSN 56
+ + +FDF LPP IA + R ++RL+VV P + + D SD+ +L
Sbjct: 2 LTLSDFDFPLPPELIAQSALPDRSASRLLVVERLAPGEQPDAIRLVDRAFSDIIGYLKPE 61
Query: 57 DAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
D +VFN+T+VI A RF ++ + + ++ R SK +G +LH
Sbjct: 62 DLLVFNDTRVIKA-----RFFGQKPSGGKVEVLVERVLDTHTVLAQVRASKTPAEGSLLH 116
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
++D + +D++ T L F ++L I G +PLPPYI DA D
Sbjct: 117 L-AEDAFAVTVGPRVDQFFT----LRFPAPALDL---IEQYGRLPLPPYITHD--PDAYD 166
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YA+ G+VAAPTAGLHF L +RL + G++ F+TLHVGAGTF PV+ E+
Sbjct: 167 ETRYQTVYARNPGAVAAPTAGLHFDDALFARLDAAGVRRAFLTLHVGAGTFQPVRTENIA 226
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+H MHSE I A A+ + RGGR+++VGTTSLR LE+A DG + +G T+IF
Sbjct: 227 EHKMHSEWYAISPELADAVRETRKRGGRVIAVGTTSLRALESAAKPDGTLEAGNGDTDIF 286
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGY+FR VD L++NFHLPKSTLLMLVSA G+E + Y+HA+ YRF+SYGD LL
Sbjct: 287 ITPGYQFRLVDALITNFHLPKSTLLMLVSALAGVEAIRAAYRHAVEARYRFFSYGDAMLL 346
Query: 357 FQK 359
++
Sbjct: 347 TRQ 349
>gi|329119928|ref|ZP_08248602.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
bacilliformis ATCC BAA-1200]
gi|327464084|gb|EGF10395.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
bacilliformis ATCC BAA-1200]
Length = 474
Score = 262 bits (670), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 160/360 (44%), Positives = 213/360 (59%), Gaps = 20/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M++ +FDF LP IA P R ++RL+V P+ + + D + LP + + D V
Sbjct: 131 MLLSDFDFHLPEHLIAQHPPAERGASRLLVALPDGT----LRDETFAFLPQLVRAGDLFV 186
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G +L F
Sbjct: 187 FNNTKVVKARLFGQK-----ESGGRIEALIERVLDAHTALAHIRASKSPKPGTVLLF--- 238
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQI-SLVGTIPLPPYIARKRPIDARDYVD 179
DG R E T GE L +G + QI G +PLPPYIAR A D
Sbjct: 239 DGGIRAEMTE----RAGE-LFTLRFAGEQSVWQILERHGRLPLPPYIARA--AAAEDEAR 291
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK QG+VAAPTAGLHFT LL+ L + G + +TLHVGAGTF PV+ E+ +H
Sbjct: 292 YQTVYAKHQGAVAAPTAGLHFTEALLAELEARGARTAEITLHVGAGTFQPVRTENVAEHK 351
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE I A TA+A+ K+ GGR+ +VGTTS+R LE+A G ++ SG T+IF+TP
Sbjct: 352 MHSEWYDIPAETAEAVAETKALGGRVWAVGTTSVRALESAARATGCLSAGSGDTDIFLTP 411
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
G RF D L++NFHLPKSTLLMLVSAF G EE +++Y+HA+ YRF+SYGD +L +K
Sbjct: 412 GCRFNVADCLITNFHLPKSTLLMLVSAFAGTEEIRRIYRHAVEREYRFFSYGDAMVLGRK 471
>gi|331003020|ref|ZP_08326532.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lachnospiraceae oral taxon 107 str. F0167]
gi|330413064|gb|EGG92439.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lachnospiraceae oral taxon 107 str. F0167]
Length = 341
Score = 262 bits (669), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 203/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VKEF +DLP IA P+ R S+RL+V+ IS D+ +LN D +V
Sbjct: 1 MDVKEFWYDLPQELIAQDPLEDRASSRLLVLDKKNG---EISHKHFYDIIDYLNEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKVI A+L GV+ N I L R + SW +P K K G + F
Sbjct: 58 LNETKVIPARLMGVK----NDTGAAIEILLLKRKTKTSWECLVKPGKKCKVGAKIDF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L T++D G ++ E + +GT+PLPPYI +D Y
Sbjct: 111 -GEGLLTGTIMDIVEEGN-RIIEFEFEGIFEEILDKLGTMPLPPYITHA----LKDRNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ GI++ VTLHVG GTF PVKV D ++H M
Sbjct: 165 QTVYAKNEGSAAAPTAGLHFTKELLEKIEKKGIRLAKVTLHVGLGTFRPVKVNDINEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I + A +NS K G R+V VGTTS R +E+A E+G + SG+T+IFI PG
Sbjct: 225 HSEFFNISSEAADIINSTKKNGKRVVCVGTTSTRTIESAADENGYLEEKSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD L+
Sbjct: 285 YKFKVLDALITNFHLPESTLVMLVSALAGRENILHAYEEAVKEKYRFFSFGDAMLI 340
>gi|304407535|ref|ZP_07389187.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Paenibacillus curdlanolyticus YK9]
gi|304343486|gb|EFM09328.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Paenibacillus curdlanolyticus YK9]
Length = 348
Score = 262 bits (669), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 144/360 (40%), Positives = 213/360 (59%), Gaps = 15/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP IA P+ R +RL+ ++ D+ ++ D +V
Sbjct: 1 MNVDLFDFELPEELIAQTPLVERTGSRLLTLNKRTGE---TQHGTFLDIEQYVQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF-FS 119
N+T+VI A+L G++ ++ L + N W A+P+K ++ G L F
Sbjct: 58 LNDTRVIPARLFGIK----RDTGAKVELLLLKAIGDNRWEALAKPAKRLRIGTELAFGMD 113
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ G+ L A + ++ G ++ F GI + + +G +PLPPYI K +D R+
Sbjct: 114 EAGEPLLRAVIEEEGEHGSRIVRFEYEGI-FQELLDRLGEMPLPPYI--KEKLDDRER-- 168
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ +GS AAPTAGLHFT+ LL +L G+ + +VTLHVG GTF P+ V+ ++H+
Sbjct: 169 YQTVYARHEGSAAAPTAGLHFTTELLEQLQRKGVGIAYVTLHVGLGTFRPMSVDTVEEHV 228
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT--EDGIINPWSGFTNIFI 297
MHSE + TAQ + KSRGGRI++VGTTS R LE+A + DG + SG+T+IFI
Sbjct: 229 MHSEYFELSETTAQQIVETKSRGGRIIAVGTTSARTLESAASMFTDGQVQACSGWTDIFI 288
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY F+ VD L++NFHLPKSTL+MLVSA G + + Y+ A++ YRF+S+GD L++
Sbjct: 289 FPGYSFKLVDALLTNFHLPKSTLVMLVSALAGRDAIMQAYREAVALQYRFFSFGDAMLIY 348
>gi|194097646|ref|YP_002000684.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae NCCP11945]
gi|291044646|ref|ZP_06570355.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae DGI2]
gi|193932936|gb|ACF28760.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae NCCP11945]
gi|291011540|gb|EFE03536.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae DGI2]
gi|317163467|gb|ADV07008.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae TCDC-NG08107]
Length = 356
Score = 262 bits (669), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 152/356 (42%), Positives = 207/356 (58%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P++ + D + DLP ++ + D +V
Sbjct: 11 MDISDFDFTLPEHLIAQHPPEVRGSSRLLVALPDMP----LQDRVFGDLPDYVEAGDVLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 67 FNNTKVMKARLFGQKDSG-----GRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 119 --EGGIRAVMVGR--EGELFCLRFEGGQTVYELLEQNGHLPLPPYI--ERAADADDDSRY 172
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 173 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 232
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + T A+ + K+RG + +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 233 HSEWFEVPSETVAAVEAAKARGNKAWAVGTTSMRALESAARATGYLKDGQGDTDIFITPG 292
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF VD L++NFHLPKSTLLMLV AF G+ + +Y+HAI YRF+SYGD +L
Sbjct: 293 YRFNVVDRLVTNFHLPKSTLLMLVGAFSGMGHIRAVYRHAIEREYRFFSYGDAMVL 348
>gi|237654063|ref|YP_002890377.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Thauera sp.
MZ1T]
gi|237625310|gb|ACR02000.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Thauera sp.
MZ1T]
Length = 358
Score = 262 bits (669), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 147/362 (40%), Positives = 209/362 (57%), Gaps = 21/362 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FD+ LPP IA P+ R ++RL+V+ P ++D + S L +N D +V
Sbjct: 3 LTLADFDYTLPPELIAQAPLAERSASRLLVLEPQEGAAPRLTDAVFSALAERVNPGDLLV 62
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF--- 117
FN+T+VI A+L+GV+ ++ + V P+ R SK K G L
Sbjct: 63 FNDTRVIHARLHGVKDSG-----GQVEVLIERPVGPHEALAQVRASKSPKTGSRLRLADA 117
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
F + R+ ++ E LL LER G +PLPPYI +R D
Sbjct: 118 FEVEVLGRVGEFFHLRFPPDEDLLAL------LERH----GKLPLPPYI--QRAAGEADE 165
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YA+ GSVAAPTAGLHF LL+R+ + G K ++TLHVGAGTF PV+V+D +
Sbjct: 166 SRYQTVYARAPGSVAAPTAGLHFDDALLARIAARGAKCAWLTLHVGAGTFQPVRVDDLGE 225
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH E I T A+ + ++ GGR+++VGTTS+R LE A E G + SG T IFI
Sbjct: 226 HRMHRERYVIPQETVDAIAATRAAGGRVIAVGTTSMRALEAAAQE-GALEAGSGETEIFI 284
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG+RF+ VD L++NFHLP+STL+MLVSAF G++ ++ Y HA+ YRF+SYGD +
Sbjct: 285 LPGFRFQVVDALVTNFHLPRSTLMMLVSAFAGMDSIRRAYAHAVEQRYRFFSYGDAMFIT 344
Query: 358 QK 359
++
Sbjct: 345 RR 346
>gi|228993157|ref|ZP_04153079.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
pseudomycoides DSM 12442]
gi|228999207|ref|ZP_04158788.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
mycoides Rock3-17]
gi|228760552|gb|EEM09517.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
mycoides Rock3-17]
gi|228766616|gb|EEM15257.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
pseudomycoides DSM 12442]
Length = 350
Score = 262 bits (669), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 154/353 (43%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQTPLEQRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G I+ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEDGDKWETLVKPAKRVKEGTIISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT I + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 111 -GEGKLKATCIGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+ + F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKKKGVHLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETADLLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCATSGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF E Y A+ YRF+S+GD
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFASRENVLHAYNEAVKEKYRFFSFGD 337
>gi|229006754|ref|ZP_04164388.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
mycoides Rock1-4]
gi|228754615|gb|EEM04026.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
mycoides Rock1-4]
Length = 350
Score = 262 bits (669), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 154/353 (43%), Positives = 208/353 (58%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQTPLEQRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G I+ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEDGDKWETLVKPAKRVKEGTIISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT I + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 111 -GEGKLKATCIGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL L G+ + F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEELKKKGVHLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETADLLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCATSGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF E Y A+ YRF+S+GD
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFASRENVLHAYNEAVKEKYRFFSFGD 337
>gi|57234386|ref|YP_181528.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Dehalococcoides ethenogenes 195]
gi|91207421|sp|Q3Z8C1|QUEA_DEHE1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|57224834|gb|AAW39891.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Dehalococcoides ethenogenes 195]
Length = 343
Score = 262 bits (669), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 143/359 (39%), Positives = 206/359 (57%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD++LP IA +P PRDS+RL+V++ + + D+ + D +V
Sbjct: 1 MKTSDFDYNLPQEYIAQKPAEPRDSSRLLVLNRQSG---ELKSCIFRDITGYFQPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN++V+ A++ G++ +I L W +P K K G I+ Q
Sbjct: 58 MNNSRVLPARIKGIK----QDTSAKIEILLLKSDGNGCWEALLKPGKRTKPGTIIDIRKQ 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DGQ ++A V+ G LL FS + ++ +G +PLPPYI P+ D Y
Sbjct: 114 DGQIHIQAEVLADKEDGIKLLRFSDETLLMK-----LGEVPLPPYI--HTPVS--DPERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA GSVAAPTAGLHFT LL RL +G+ +VTLH+G TF PVK ED DHI+
Sbjct: 165 QTVYALTNGSVAAPTAGLHFTPELLERLGDMGVICTYVTLHIGLDTFRPVKEEDPSDHII 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
H E G + A TA A+ K+ G R+ VGT++ RL+E A+ +++GII +SG+ ++FI
Sbjct: 225 HREYGILSAETAAAICQAKANGKRVFCVGTSATRLVEQASSLSQNGIIELYSGWADLFIL 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+F+ D ++NFHLP+ST LML +AF G +K Y+ AI+ YRFYS+GD L+
Sbjct: 285 PGYKFKVADCFITNFHLPRSTPLMLTAAFAGWPLLQKAYEKAINEHYRFYSFGDAMLVL 343
>gi|293365730|ref|ZP_06612439.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus oralis ATCC 35037]
gi|307703671|ref|ZP_07640613.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus oralis ATCC 35037]
gi|291316098|gb|EFE56542.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus oralis ATCC 35037]
gi|307623078|gb|EFO02073.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus oralis ATCC 35037]
Length = 342
Score = 262 bits (669), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 210/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RDS++L++V+ H + D+ L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDSSKLLIVNRETGEFQDKHFHSIIDM---LEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L + + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQK----EETGGHVELLLLKNTAGDEWEVLAKPAKRLKVGTRVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLEVLESL-GEMPLPPYIHEK--LDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L +VK GGR+++VGTTS+R LET ++ +G I SG+TNIFI P
Sbjct: 225 HSEFYQLSDEAAATLRTVKENGGRVIAVGTTSIRTLETIGSKFNGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G + Y HAI YRF+S+GD ++
Sbjct: 285 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRDLVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|229086981|ref|ZP_04219138.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock3-44]
gi|228696357|gb|EEL49185.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock3-44]
Length = 350
Score = 261 bits (668), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 154/353 (43%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQTPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEDGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT I + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 111 -GEGKLKATCIGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+ + F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKKKGVHLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG I SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETADLLNRVKENGGRIITVGTTSTRTLETIATDNDGKICGASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF E Y A+ YRF+S+GD
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRENVLHAYNEAVKEKYRFFSFGD 337
>gi|291165804|gb|EFE27852.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Filifactor
alocis ATCC 35896]
Length = 340
Score = 261 bits (668), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 152/352 (43%), Positives = 207/352 (58%), Gaps = 18/352 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M K+F +DLP + IA P+ RDS++L+++ I D+ +L D +V
Sbjct: 1 MNTKDFYYDLPEACIAQEPLKQRDSSKLLLLDKKTG---EIEHKHFKDITQYLKKGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + I L R+ +W V A+P+K +K G+I+ FF Q
Sbjct: 58 MNNTRVLPARLFGTK----EDTGANIELLLLKRMDLTTWEVMAKPAKRLKIGNII-FFHQ 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A V + + G ++ F GI E + ++GT+PLPPYI +K D Y
Sbjct: 113 ----TLSAVVKEIKDEGIRIIEFIYDGI-FEEILDMLGTMPLPPYIHKK----LEDKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K+ GS AAPTAGLHFT LLS L IG+++ +VTLHVG GTF PV VED H M
Sbjct: 164 QTVYSKVDGSAAAPTAGLHFTKKLLSELQDIGVQLEYVTLHVGLGTFRPVMVEDVTKHHM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E I AQ +N K+ RI+ VGTTS+R LE ++ DG I+ SG+T+IFI P
Sbjct: 224 HTEYYEIQKDVAQRINQAKAEKRRIICVGTTSVRTLE-SSARDGRISELSGWTDIFIYPP 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
YRF+ D L++NFHLP+STLLMLVSA E Y+ AI YRF+S+GD
Sbjct: 283 YRFQMADALITNFHLPESTLLMLVSALANKEFIMHAYKTAIEQNYRFFSFGD 334
>gi|269941125|emb|CBI49511.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus TW20]
Length = 341
Score = 261 bits (668), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 151/357 (42%), Positives = 210/357 (58%), Gaps = 18/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHL-VSDLPAFLNSNDAI 59
M ++EFD+DLP S IA P+ RD +RL+V+ HL D+ + D +
Sbjct: 1 MNIEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETGE----MKHLHFKDIIEYFRPGDTL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 57 VLNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI K +D D
Sbjct: 111 --GNGKIIAECIKEMDQGGRIMRLHYEGI-LQERLDELGEMPLPPYI--KERLDDPDR-- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT LL + + G+ + FVTLHVG GTF PV V+D +DH
Sbjct: 164 YQTVYAKESGSAAAPTAGLHFTDELLIEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHE 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE + TA LN KS+G RI+SVGTTS R LET + SG TNIFI P
Sbjct: 224 MHSEYYQMTQETADLLNDTKSKGHRIISVGTTSTRTLETIRRDHDKFVETSGCTNIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
G+ F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 284 GFDFKAIDGQITNFHLPKSTLVMLVSAFSSRENVLNAYKTAVNLEYRFFSFGDAMLI 340
>gi|71281922|ref|YP_267862.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Colwellia
psychrerythraea 34H]
gi|91207419|sp|Q487A3|QUEA_COLP3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|71147662|gb|AAZ28135.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Colwellia
psychrerythraea 34H]
Length = 359
Score = 261 bits (668), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 151/372 (40%), Positives = 219/372 (58%), Gaps = 32/372 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP + IA P R ++RLM ++ N I+D + +D+ A LNS D +V
Sbjct: 1 MRVSDFSFDLPEALIARYPKAERTASRLMTLNGNSGA---ITDGVFTDIVAQLNSGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + N+ + R SK K G+ L ++
Sbjct: 58 FNNTRVIPARMFGQKASG-----GKIEVLVERVIDQNTALAHIRASKSPKVGNELFLGNE 112
Query: 121 DGQSRLEATVID--------KWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
D +++AT++ K+N+ E +L + +G +PLPPYI RP
Sbjct: 113 DSDVKVKATMVARHGALFELKFNSDESVLTI----------LDKIGHMPLPPYI--DRPD 160
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+ D YQT Y + G+VAAPTAGLHF LL R+ + G+++ FVTLHVGAGTF PVKV
Sbjct: 161 EDSDKERYQTVYNEKPGAVAAPTAGLHFDEALLERIKAKGVELAFVTLHVGAGTFQPVKV 220
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINP 288
++ DHIMH+E + + K+ GGR+V+VGTTS+R LE+A ++ ++
Sbjct: 221 DEIADHIMHAEYVEVSDEVVAQIAKTKAAGGRVVAVGTTSVRSLESAAKAALDKNKPLSA 280
Query: 289 WSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
+ G T+IFITPG +F+ +D L++NFHL +STLLMLVSAF G + YQHAIS YRF+
Sbjct: 281 FYGDTDIFITPGCQFQIIDALVTNFHLSESTLLMLVSAFSGYDHIMSAYQHAISQEYRFF 340
Query: 349 SYGDTSLLFQKR 360
SYGD L ++
Sbjct: 341 SYGDAMFLTKQE 352
>gi|258424065|ref|ZP_05686947.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A9635]
gi|257845686|gb|EEV69718.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A9635]
Length = 347
Score = 261 bits (668), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 150/355 (42%), Positives = 211/355 (59%), Gaps = 18/355 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHL-VSDLPAFLNSNDAIVF 61
++EFD+DLP S IA P+ RD +RL+V+ HL D+ + D +V
Sbjct: 9 IEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETGE----MKHLHFKDIIEYFRPGDTLVL 64
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 65 NDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF---- 116
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI K +D D YQ
Sbjct: 117 GNGKIIAECIKEMDQGGRIMRLHYEGI-LQERLDELGEMPLPPYI--KERLDDPDR--YQ 171
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YAK GS AAPTAGLHFT LL+ + + G+ + FVTLHVG GTF PV V+D +DH MH
Sbjct: 172 TVYAKESGSAAAPTAGLHFTDELLTEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHEMH 231
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
SE + TA LN KS+G RI+SVGTTS R LET + SG+TNIFI PG+
Sbjct: 232 SEYYQMTQETANLLNDTKSKGHRIISVGTTSTRTLETIRRDYDKFVETSGWTNIFIYPGF 291
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 292 DFKAIDGQITNFHLPKSTLVMLVSAFSTRENVLNAYKTAVNLEYRFFSFGDAMLI 346
>gi|225378183|ref|ZP_03755404.1| hypothetical protein ROSEINA2194_03843 [Roseburia inulinivorans DSM
16841]
gi|225209989|gb|EEG92343.1| hypothetical protein ROSEINA2194_03843 [Roseburia inulinivorans DSM
16841]
Length = 345
Score = 261 bits (668), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 149/360 (41%), Positives = 200/360 (55%), Gaps = 16/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+F +DLP IA P+ R S+RLMV+ + D+ +L D +V
Sbjct: 1 MDVKDFYYDLPQELIAQDPLEDRSSSRLMVLD---KITGEVEHRHFKDITEYLRPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L GV+ E +I L R + W +P K K G + F
Sbjct: 58 INNTKVIPARLYGVK----EGTEAKIEILLLKRKENDIWETLVKPGKKCKIGTKIVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L V+D G L+ F GI E + +G +PLPPYI + +D Y
Sbjct: 111 -GEGILTGEVVDIVEEGNRLIQFHYEGI-FEEILDRLGQMPLPPYITHQ----LQDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ +G+++ VTLHVG GTF PVK D H M
Sbjct: 165 QTVYAKYDGSAAAPTAGLHFTPELLQQVRDMGVEIAEVTLHVGLGTFRPVKETDVLKHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I+ A +N K G R+++VGTTS R LE+A E+G + SG+T IFI PG
Sbjct: 225 HSEFYKIEQSEADKINKAKKEGHRVIAVGTTSTRTLESAADENGFLTEKSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
Y+F+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD + +
Sbjct: 285 YQFKVIDALITNFHLPESTLVMLVSALAGREHVLAAYETAVEEKYRFFSFGDAMFIVDRE 344
>gi|304380763|ref|ZP_07363431.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus ATCC BAA-39]
gi|304340700|gb|EFM06632.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus ATCC BAA-39]
gi|320140473|gb|EFW32327.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus MRSA131]
gi|320144012|gb|EFW35781.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus MRSA177]
Length = 347
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 150/355 (42%), Positives = 210/355 (59%), Gaps = 18/355 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHL-VSDLPAFLNSNDAIVF 61
++EFD+DLP S IA P+ RD +RL+V+ HL D+ + D +V
Sbjct: 9 IEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETGE----MKHLHFKDIIEYFRPGDTLVL 64
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 65 NDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF---- 116
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI K +D D YQ
Sbjct: 117 GNGKIIAECIKEMDQGGRIMRLHYEGI-LQERLDELGEMPLPPYI--KERLDDPDR--YQ 171
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YAK GS AAPTAGLHFT LL + + G+ + FVTLHVG GTF PV V+D +DH MH
Sbjct: 172 TVYAKESGSAAAPTAGLHFTDELLIEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHEMH 231
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
SE + TA LN KS+G RI+SVGTTS R LET + SG+TNIFI PG+
Sbjct: 232 SEYYQMTQETADLLNDTKSKGHRIISVGTTSTRTLETIRRDHDKFVETSGWTNIFIYPGF 291
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 292 DFKAIDGQITNFHLPKSTLVMLVSAFSSRENVLNAYKTAVNLEYRFFSFGDAMLI 346
>gi|82703545|ref|YP_413111.1| S-adenosylmethionine [Nitrosospira multiformis ATCC 25196]
gi|91207386|sp|Q2Y6A2|QUEA_NITMU RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|82411610|gb|ABB75719.1| S-adenosylmethionine [Nitrosospira multiformis ATCC 25196]
Length = 356
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 161/370 (43%), Positives = 221/370 (59%), Gaps = 34/370 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++FDFDLPP IA P R ++R++ + + D + +DLP++L D IV
Sbjct: 1 MKIQDFDFDLPPELIAQFPAEKRGNSRMLHLDATSGA---LQDRMFADLPSYLRPGDVIV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYA-RPSKVIKKGDILHFFS 119
FN+T+VI A+L GVR R E L RV + ++ A R S K G L
Sbjct: 58 FNDTRVIKARLYGVRDTG-GRVE-----VLVERVLDSHCALAAIRASHSPKPGSKLFL-- 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIE--LERQISLVGTIPLPPYIARKRPIDARDY 177
+E TV+ + + IL SG+ LER G +PLPPYI+R P++ D
Sbjct: 110 ---AGAIEVTVLSREHGFYILQFEHESGVMELLER----YGNLPLPPYISR--PVEKSDE 160
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
+ YQT YA G+VAAPTAGLHF ++L L +G+ + VTLHVG+GTF PV+VE+ D
Sbjct: 161 LRYQTVYAARPGAVAAPTAGLHFDEHMLGLLRKMGVVMAHVTLHVGSGTFQPVRVENIAD 220
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE----------DGI-I 286
H MHSE+ ++ A T + + K+ GGR+++VGTTSLR LE A DG+ I
Sbjct: 221 HRMHSEVFYVSAETVECIRHAKAEGGRVLAVGTTSLRALEAAAAFAGERAEADNGDGVRI 280
Query: 287 NPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYR 346
+G T+IFITPGY+FR VD L++NFHLP+STLLMLVSAF G+E + Y+HAI YR
Sbjct: 281 KCGAGETDIFITPGYQFRVVDCLLTNFHLPRSTLLMLVSAFGGVENIRCAYRHAIKERYR 340
Query: 347 FYSYGDTSLL 356
F+S+GD L+
Sbjct: 341 FFSFGDAMLI 350
>gi|225076136|ref|ZP_03719335.1| hypothetical protein NEIFLAOT_01168 [Neisseria flavescens
NRL30031/H210]
gi|224952479|gb|EEG33688.1| hypothetical protein NEIFLAOT_01168 [Neisseria flavescens
NRL30031/H210]
Length = 342
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 154/357 (43%), Positives = 210/357 (58%), Gaps = 20/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF+LP IA P R S+RL+V P L I D DLP ++ D +V
Sbjct: 1 MDISDFDFELPEKLIAQHPPEVRGSSRLLVALPTLP----IEDKHFGDLPDYVAPGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + +I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKASG-----GKIEALIERVLDAHTALAHIRSSKSPKPGTELIF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ + A ++++ E L G + + + G +PLPPYI +R D D
Sbjct: 109 --EGDIRAVMMER---AEELFCLKFEGEQTVYELLEQNGHLPLPPYI--ERAADDEDDSR 161
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK QG+VAAPTAGLHFT LL RL + G++ VTLHVGAGTF PV+V+ ++H
Sbjct: 162 YQTVYAKYQGAVAAPTAGLHFTDELLGRLKAKGVETAEVTLHVGAGTFQPVRVDKIEEHK 221
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE + A T A+ + K+RG ++ +VGTTS+R LE+A E G + G T+IFITP
Sbjct: 222 MHSEWFDVPAETVAAVEAAKARGNKVWAVGTTSMRALESAARETGRLKAGRGDTDIFITP 281
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GYRF D L++NFHLPKSTLLMLVSA G+E + +Y+HA+ YRF+SYGD +L
Sbjct: 282 GYRFNVADRLITNFHLPKSTLLMLVSALSGMEHIRSVYRHAVEQEYRFFSYGDAMIL 338
>gi|157803425|ref|YP_001491974.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
canadensis str. McKiel]
gi|166216748|sp|A8EXV6|QUEA_RICCK RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|157784688|gb|ABV73189.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
canadensis str. McKiel]
Length = 386
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 150/399 (37%), Positives = 221/399 (55%), Gaps = 54/399 (13%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA P RD + L++ + P+ + + D +L D +V
Sbjct: 1 MKLSDFDFDLPSELIAQYPSSKRDHSDLLIA---ATPPIKTKFYNIID---YLKEGDLLV 54
Query: 61 FNNTKVITAQLN-----------------GVRFC----HINRRE---------------- 83
FNN+KVI A+LN G C + N RE
Sbjct: 55 FNNSKVIKAKLNLEKNRPLSKLAYRDKFEGDMECRTAVYTNVREDSSTGSTYKLPLEVEL 114
Query: 84 ---KEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEIL 140
I+ L+ R+S N WS +A+P++ + GD HF + + +++K GEI
Sbjct: 115 EKRSNITINLNQRLSNNCWSAFAKPARRLNIGDEFHFDNH------KVIIVEKLAIGEIK 168
Query: 141 LVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHF 200
+ F + I + + G +PLP YI R + YQ Y+ I+GSVAAPTAGLHF
Sbjct: 169 VKFELDDISVFEFLDKYGEMPLPLYI-RHHEAQKSNNERYQNIYSSIEGSVAAPTAGLHF 227
Query: 201 TSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKS 260
T+++L++L + I+ F+TLHVGAGTF+PVK E+ +H MH+E I TA+ +N K
Sbjct: 228 TNDILNKLKAKNIQTTFLTLHVGAGTFLPVKTENIHEHKMHTEYCSITPDTARLINKAKQ 287
Query: 261 RGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTL 320
RI++VGTT+LR LE++ +G + T+IFITPG++F+ DIL++NFH PKSTL
Sbjct: 288 EKQRIIAVGTTTLRTLESSCN-NGTVKACDFETDIFITPGFKFQTADILLTNFHFPKSTL 346
Query: 321 LMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
ML+ AF G +E K+Y++AI RF+SYGD +LL++K
Sbjct: 347 FMLICAFAGFKEMHKLYKYAIKEKMRFFSYGDATLLYRK 385
>gi|147677366|ref|YP_001211581.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pelotomaculum thermopropionicum SI]
gi|189038865|sp|A5D3G5|QUEA_PELTS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|146273463|dbj|BAF59212.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase
[Pelotomaculum thermopropionicum SI]
Length = 341
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 151/356 (42%), Positives = 206/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+ LP IA P+ RD +RLMVV + L D+ +LN DA+V
Sbjct: 1 MNLSDFDYFLPDELIAQEPLPERDMSRLMVVRLDGK---EFEHRLFKDIVDYLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKVI A+L G + R I L R+ + W RP K KG + F
Sbjct: 58 INETKVIPARLVGRKEGTGAR----IELLLLRRLDSSRWEALVRPGKKAPKGTAVVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L ++D G ++ FS G+ E + VG +PLPPYI K+P+ D Y
Sbjct: 111 -GEGLLACRILDSTAYGGRVVEFSFEGL-FEEVLERVGVMPLPPYI--KKPL--LDQQRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GS AAPTAGLHF+ LLSR+ +G+ V V LHVG GTF PV+ ED H M
Sbjct: 165 QTIYARQAGSAAAPTAGLHFSPGLLSRIREMGVAVIPVLLHVGLGTFRPVRTEDIRRHRM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E I ++A+ ++RGGR+++VGTT+ R LE+A E G + P SG+T IFI PG
Sbjct: 225 HAEYYEITEEASRAIAETRARGGRVIAVGTTTTRCLESAAEEGGRVRPGSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF+ +D L++NFHLPKSTL+M+V+A G E Y+ A+ YRF+S+GD L+
Sbjct: 285 YRFKVIDGLVTNFHLPKSTLIMMVAALAGRERILAAYREAVGLRYRFFSFGDAMLI 340
>gi|315658090|ref|ZP_07910962.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus lugdunensis M23590]
gi|315496419|gb|EFU84742.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus lugdunensis M23590]
Length = 341
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 149/356 (41%), Positives = 215/356 (60%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++FD+ LP S IA P+ RD +RL+V+ N + H D+ +LN D +V
Sbjct: 1 MNIEDFDYHLPESLIAQTPLKNRDQSRLLVL--NKKTGDMKHQHF-KDVINYLNPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L GV+ ++ + ++ N W V +P+K IK G+ L F
Sbjct: 58 LNDTRVMPARLFGVK----EETGAKVEMLMLTQIENNDWEVLLKPAKRIKVGNQLSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ ++ A I + + G ++ GI L+ ++ +G +PLPPYI K +D D Y
Sbjct: 111 -GEGKIIAECIKELDQGGRIMRLHYEGI-LQERLDELGEMPLPPYI--KARLDDPDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT NLL + + G+ + F+TLHVG GTF PV VE+ ++H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTDNLLKDIKAKGVNIAFITLHVGLGTFRPVSVENINEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TAQ LN+ K +G RI++VGTTS R LET + SG+T+IFI PG
Sbjct: 225 HSEYYQMTENTAQLLNNTKLQGHRIIAVGTTSTRTLETIRRDHSQFIATSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ F+A+D L++NFHLPKSTL+MLVSAF + Y+ A+ YRF+S+GD L+
Sbjct: 285 FEFKAIDALITNFHLPKSTLVMLVSAFSSRQFILTAYRKAVELEYRFFSFGDAMLI 340
>gi|314933804|ref|ZP_07841169.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus caprae C87]
gi|313653954|gb|EFS17711.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus caprae C87]
Length = 341
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 149/357 (41%), Positives = 210/357 (58%), Gaps = 18/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHL-VSDLPAFLNSNDAI 59
M ++EFD+ LP S IA P+ RD +RL+V+ HL D+ +LN D +
Sbjct: 1 MNIEEFDYHLPESLIAQTPLKNRDQSRLLVLQRETGK----MTHLHFKDVIDYLNPGDTL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L F
Sbjct: 57 VLNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNRLSF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G ++ A I + G ++ GI L+ ++ +G +PLPPYI K +D D
Sbjct: 111 --GDGKIVAECIKELEQGGRIMRLHYDGI-LQERLDELGEMPLPPYI--KERLDDPDR-- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT +LL+++ G+ + F+TLHVG GTF PV V++ DDH
Sbjct: 164 YQTVYAKESGSAAAPTAGLHFTDDLLNQIKQKGVNIAFITLHVGLGTFRPVSVDNIDDHE 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE + TA LN K++G RI+SVGTTS R LET SG+T+IFI P
Sbjct: 224 MHSEYYQMTQETADLLNQTKAKGKRIISVGTTSTRTLETIRRGHEQFVEKSGWTDIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
G+ ++A+D L++NFHLPKSTL+MLVSAF E Y A+ YRF+S+GD L+
Sbjct: 284 GFEYKAIDGLITNFHLPKSTLVMLVSAFSTRENILNAYHKAVEMEYRFFSFGDAMLI 340
>gi|302670448|ref|YP_003830408.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Butyrivibrio proteoclasticus B316]
gi|302394921|gb|ADL33826.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Butyrivibrio proteoclasticus B316]
Length = 349
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 144/352 (40%), Positives = 201/352 (57%), Gaps = 16/352 (4%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
++ FDLP IA P+ RD +L+V+ + H+ +++ +L D +V NNT
Sbjct: 13 DYYFDLPQELIAQDPMEKRDECKLLVMDKETGN---VEHHVFNEVINYLQPGDCLVLNNT 69
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQS 124
KVI A+L GV+ + L R + W +P K ++ G + F G
Sbjct: 70 KVIPARLLGVK----EETGAAVEILLLKRKEADVWETLVKPGKKLRPGAKVSF----GDG 121
Query: 125 RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTY 184
L+A ++D + G L+ F GI E + +G +PLPPYI K +D YQT Y
Sbjct: 122 ILKAEIMDIVDEGNRLVKFYYDGI-WEEVLDRLGEMPLPPYITHK----LQDKNMYQTVY 176
Query: 185 AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEI 244
AK +GS AAPTAGLHFT LL ++ G+ + FVTLHVG GTF PVKV + +H MH+E
Sbjct: 177 AKYEGSAAAPTAGLHFTDELLDKIREKGVDIAFVTLHVGLGTFRPVKVTNVKEHHMHTEW 236
Query: 245 GFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFR 304
+ A +N K G R++ VGTTS R +E+A EDG ++ SG T+IFI PGY+F+
Sbjct: 237 YQVTQEAADKINKAKESGHRVICVGTTSCRTIESAAGEDGTLSAASGDTSIFIYPGYKFK 296
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+D L++NFHLP+STL+MLVSAF G E Y+ AI YRF+S+GD L
Sbjct: 297 LMDGLITNFHLPESTLVMLVSAFAGREHVLNAYETAIKEKYRFFSFGDACLF 348
>gi|229829378|ref|ZP_04455447.1| hypothetical protein GCWU000342_01467 [Shuttleworthia satelles DSM
14600]
gi|229792541|gb|EEP28655.1| hypothetical protein GCWU000342_01467 [Shuttleworthia satelles DSM
14600]
Length = 345
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 143/356 (40%), Positives = 201/356 (56%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FD++LP IA P+ RD +RL+V+ P + D+ +L + D +V
Sbjct: 1 MDVKDFDYELPEELIAQDPLLKRDQSRLLVLDPETGA---MEHRHFYDIRDYLRAGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G + ++ L + ++W +P + ++G + F
Sbjct: 58 INNTRVIPARLLGAK----EETGAKVEVLLLINHGGDNWETLVKPGRKCREGARISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L V G ++ FS GI E + +G +PLPPYI + R Y
Sbjct: 111 -GEGLLVGQVTKVLEDGNRMIHFSYQGI-WEEVLDRLGQMPLPPYIHHQLADKNR----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + G+++ VTLHVG GTF PVK + +DH M
Sbjct: 165 QTVYAKHDGSAAAPTAGLHFTPELLEEIRKSGVEIAEVTLHVGLGTFRPVKADRVEDHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +N ++ GGRI++VGTTS R LE+ DG I SG+T IFI PG
Sbjct: 225 HSEYYVVGQEAADTINRARANGGRIIAVGTTSTRTLESVAEADGTIPVKSGWTKIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+A+D L++NFHLP+STLLMLVSA G + K Y+ A+ YRF+S+GD +
Sbjct: 285 YQFKAIDGLITNFHLPQSTLLMLVSALAGRDHILKAYREAVEEKYRFFSFGDAMFI 340
>gi|241890140|ref|ZP_04777438.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Gemella
haemolysans ATCC 10379]
gi|241863762|gb|EER68146.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Gemella
haemolysans ATCC 10379]
Length = 342
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 150/358 (41%), Positives = 210/358 (58%), Gaps = 19/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLV-SDLPAFLNSNDAI 59
M +++FDF LP IA P+ RD+++L+ V + +H V SD+ + N D +
Sbjct: 1 MKLEQFDFYLPEELIAQTPLLKRDTSKLLCVDRKNNS----HEHKVFSDIIDYFNPGDTL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V NNT+V+ A+L G + I L + N W +P+K IK+G I+ F
Sbjct: 57 VLNNTRVMPARLYGAK----KDTGAAIEVLLLKNLGHNDWECLVKPAKRIKEGGIVSF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G +EA + G F GI ER + +GT+PLPPYI + R
Sbjct: 111 --GDGIMEAVCTKVLDDGFRHFEFKYEGIFQER-LDELGTMPLPPYIKERLTDKER---- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y+K GS AAPTAGLHFT+ LL ++ G+ + ++TLHVG GTF PV VE+ ++H
Sbjct: 164 YQTVYSKEVGSSAAPTAGLHFTNELLEKIKEKGVNIAYLTLHVGLGTFRPVAVENIEEHD 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFIT 298
MHSE +D TA+ +N K GGR+ SVGTTS R LET A +G I SG+TNIFI
Sbjct: 224 MHSEYYTLDEDTARIINKTKEDGGRVFSVGTTSTRTLETIARDNNGKIVAASGWTNIFIY 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PG+ F+ VD L++NFHLPKS+L+MLVSAF E+ ++Y A+ + YRF+S+GD ++
Sbjct: 284 PGFEFKCVDGLITNFHLPKSSLIMLVSAFYDREKVIELYNIAVENKYRFFSFGDAMII 341
>gi|121998492|ref|YP_001003279.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Halorhodospira halophila SL1]
gi|121589897|gb|ABM62477.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Halorhodospira halophila SL1]
Length = 345
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 153/362 (42%), Positives = 209/362 (57%), Gaps = 35/362 (9%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+FD+ LP IA RP R ++R++V+ + ++D +DLPA+L + D +V N+T
Sbjct: 8 DFDYALPERLIAHRPAAQRAASRMLVLRTDSGA---LADRRFTDLPAYLRAGDLLVLNDT 64
Query: 65 KVITAQLN-----GVRFCHINRREKE-----ISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
+VI A+L G R + R ++ I+C L +P V + ++
Sbjct: 65 RVIPARLEAAKPTGARVEVLIERVEDPDAGLITCQLRANRTPKPGGRLGLADGV--QAEV 122
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
L + + +L V W+ LER VG +PLPPYI +RP D
Sbjct: 123 LEREGRFFRLQLAGLVESLWDY-------------LER----VGHVPLPPYI--RRPDDD 163
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D YQT +A G+VAAPTAGLHF LL RL + G+ VTLHVGAGTF PV+ +D
Sbjct: 164 EDRTRYQTVFAARPGAVAAPTAGLHFDDALLERLRADGVGTARVTLHVGAGTFAPVESDD 223
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
H MH+E + A T A+N+ + RGGR+V+VGTT +R LE+A DG + P+SG T
Sbjct: 224 LSAHTMHAEWLEVSAETVAAVNATRERGGRVVAVGTTVVRALESAAA-DGQLAPYSGETR 282
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
+FITPGY FRAVD L++NFHLP+STLLMLVSAF G E Y+HA++ YRF+SYGD
Sbjct: 283 LFITPGYCFRAVDGLLTNFHLPESTLLMLVSAFGGYESVMAAYRHAVAEEYRFFSYGDAM 342
Query: 355 LL 356
LL
Sbjct: 343 LL 344
>gi|241759145|ref|ZP_04757253.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
flavescens SK114]
gi|241320564|gb|EER56841.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
flavescens SK114]
Length = 363
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 154/357 (43%), Positives = 211/357 (59%), Gaps = 20/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF+LP IA P R S+RL+V P L I D DLP ++ D +V
Sbjct: 22 MDISDFDFELPEKLIAQHPPEVRGSSRLLVALPTLP----IEDKHFGDLPDYVAPGDVLV 77
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + +I + + ++ + R SK K G L F
Sbjct: 78 FNNTKVMKARLFGQKASG-----GKIEALIERVLDTHTALAHIRSSKSPKPGTELIF--- 129
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ + A ++++ E L G + + + G +PLPPYI +R D D
Sbjct: 130 --EGDIRAVMMER---AEELFCLKFEGEQTVYELLEQNGHLPLPPYI--ERAADDEDDSR 182
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK QG+VAAPTAGLHFT LL RL + G++ VTLHVGAGTF PV+V+ ++H
Sbjct: 183 YQTVYAKYQGAVAAPTAGLHFTDELLGRLKAKGVETAEVTLHVGAGTFQPVRVDKIEEHK 242
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE + A T A+ + K+RG ++ +VGTTS+R LE+A E G + G T+IFITP
Sbjct: 243 MHSEWFDVPAETVAAVEAAKARGNKVWAVGTTSMRALESAARETGRLKAGRGDTDIFITP 302
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GYRF D L++NFHLPKSTLLMLVSAF G+E + +Y++A+ YRF+SYGD +L
Sbjct: 303 GYRFNVADRLITNFHLPKSTLLMLVSAFSGMEHIRSVYRYAVEQEYRFFSYGDAMIL 359
>gi|303256878|ref|ZP_07342892.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderiales bacterium 1_1_47]
gi|302860369|gb|EFL83446.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderiales bacterium 1_1_47]
Length = 354
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 152/361 (42%), Positives = 209/361 (57%), Gaps = 21/361 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LP S IA P+ R ++RL+ V P+ S + D D+ L D +VFN
Sbjct: 8 LSDFDFELPESLIAQYPLKDRAASRLLHVKPDGS----VEDLHFRDILNLLKPGDLLVFN 63
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSV-YARPSKVIKKGDILHFFSQD 121
NTKVI A+LNG + + + RV+ ++ R SK K G IL+F +
Sbjct: 64 NTKVIKARLNG------KKETGGVFEAMTERVTGTYEAISMMRASKAAKPGTILYFDHPE 117
Query: 122 GQSRLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ A V+ + GE L F +E+ + G +PLPPYI + + D Y
Sbjct: 118 GKEPARAEVLGR--EGEFFRLRFDHPVLEV---LDEYGKVPLPPYI--QHAAEKSDESRY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK G+VAAPTAGLHFT LL ++ G + FVTLHVGAGTF PV+VE+ +H+M
Sbjct: 171 QTVYAKYPGAVAAPTAGLHFTDELLQQIRDKGCEEVFVTLHVGAGTFQPVRVENLSEHVM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE--DGIINPWSGFTNIFIT 298
HSE I A+ +N K+ R+V VGTTSLR +E + ++ +G + S T +FI
Sbjct: 231 HSEWYSISPEAAEKINKAKTERRRVVCVGTTSLRTVEASASQNPEGKVRAESADTRLFIN 290
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY F+ D +++NFHLPKSTL+MLVSA CG +E Y+HA+ YRF+SYGD L Q
Sbjct: 291 PGYEFKVCDAMVTNFHLPKSTLVMLVSALCGRDEILSAYKHAVDEKYRFFSYGDACFLEQ 350
Query: 359 K 359
K
Sbjct: 351 K 351
>gi|227510191|ref|ZP_03940240.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus brevis subsp. gravesensis ATCC 27305]
gi|227190396|gb|EEI70463.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus brevis subsp. gravesensis ATCC 27305]
Length = 352
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 143/351 (40%), Positives = 210/351 (59%), Gaps = 17/351 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+++FD+ LP IA P+ RD +RL+V++ + D ++ +LN DA+V N
Sbjct: 13 LEDFDYKLPHELIAQTPIKDRDESRLLVLNKETGD---MQDRRFYNIIDYLNPGDALVMN 69
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
++KV+ A++ GV+ I L + + W +P+K K G ++ F G
Sbjct: 70 DSKVMPARIYGVK----KDTGAHIEVLLLHNIDGDRWETLMKPAKRAKVGTVIDF----G 121
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ +L+A V + + G + F GI +E + +G PLPPYI K R YQT
Sbjct: 122 EGQLQAVVTKELDHGGREIEFKYEGIFIE-ILERLGETPLPPYIKEKLDDPNR----YQT 176
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YAK GS AAPTAGLH+T LL ++ G+ + ++TLHVG GTF PV+ ++ +DH MHS
Sbjct: 177 VYAKEMGSAAAPTAGLHWTKELLQKVADKGVHLVYLTLHVGLGTFRPVEEDNIEDHKMHS 236
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + ++ LN V+ GG+IV+ GTTS+R LET T+ +G I P SG+T+IFI PGY
Sbjct: 237 EFYRLSEEASKTLNDVRKNGGKIVATGTTSIRTLETVGTKFNGEIRPDSGWTDIFIKPGY 296
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+++ VD ++NFHLPKSTL+MLV++F G E YQHAIS YRF+S+GD
Sbjct: 297 QWQVVDSFITNFHLPKSTLVMLVASFTGRENILNAYQHAISEKYRFFSFGD 347
>gi|293375248|ref|ZP_06621532.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Turicibacter sanguinis PC909]
gi|325840658|ref|ZP_08167109.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Turicibacter sp. HGF1]
gi|292646146|gb|EFF64172.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Turicibacter sanguinis PC909]
gi|325490222|gb|EGC92556.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Turicibacter sp. HGF1]
Length = 342
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 147/358 (41%), Positives = 206/358 (57%), Gaps = 16/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDF+LP IA P+ RD++RLMV++ + + D+ +L ND +V
Sbjct: 1 MRVDQFDFELPDELIAQTPLKDRDTSRLMVLNKKTG---EVKHEVFHDVLNYLRPNDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKV+ A+L G + I L + + W +P+K +K G I+ F
Sbjct: 58 LNNTKVMPARLMGQK----PDTGASIEVLLLKQEQQDCWETLVKPAKRVKVGTIVEF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A I + G+ + F GI E SL G +PLPPYI K +D RD Y
Sbjct: 111 -GDGRLKAECISTGDMGKRVFKFMYDGIFYEVLDSL-GEMPLPPYITEK--LDDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +AK GS AAPTAGLHFT LL + + G+K+ +VTLHVG GTF PV V+ ++H M
Sbjct: 165 QTVFAKEIGSAAAPTAGLHFTPELLEEIQAKGVKIAYVTLHVGLGTFRPVSVDSVEEHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + TA LN GGRI++VGTTS R LET + G G+T+IFI P
Sbjct: 225 HAEFYQMSQETADILNQTHELGGRIITVGTTSTRTLETIARDHGKFVACEGWTDIFIYPP 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y+F+ +D +++NFHLPKSTL+ML+S+ G + Y+ A+ YRF+S+GD L+ +
Sbjct: 285 YQFKGIDGMITNFHLPKSTLIMLISSLAGQDAVMNAYKIAVEEKYRFFSFGDAMLIIE 342
>gi|312897342|ref|ZP_07756768.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Megasphaera
micronuciformis F0359]
gi|310621560|gb|EFQ05094.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Megasphaera
micronuciformis F0359]
Length = 341
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 148/356 (41%), Positives = 203/356 (57%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +F ++LP IA P PRD+ARLM+ + + L L+ D +V
Sbjct: 3 LKLSDFSYELPQELIAQHPAEPRDTARLMLYDKKTGE---TENKIFRQLTDELHQGDVLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN++KVI A+L+G R + + L V + W V +P K G L F
Sbjct: 60 FNDSKVIPARLHGTRVPTGGK----VEVLLLTPVGEDRWEVLVKPGKKALPGSTLSF--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
RL V D+ + G ++ F+ G+ + I +G +PLPPYI +K + DY
Sbjct: 113 --GERLTGVVEDRTDYGGRVIHFTYDGV-FDHIIEEIGEMPLPPYIHKK----PENPDDY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +GS AAPTAGLHFT LL ++ G++ FVTLHVG GTF PV+ E+ +DH+M
Sbjct: 166 QTVYAREKGSAAAPTAGLHFTDELLEKIRDKGVETVFVTLHVGLGTFRPVEEENIEDHVM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I A A+N K G RIV+VGTTS+R LE+A E G + +G TNIFI PG
Sbjct: 226 HSEYYSITPEAAAAVNRAKEEGRRIVAVGTTSVRTLESA-AEKGRLKAGAGKTNIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y FR VD L++NFHLP+STLLML+SA E K Y+ A+ YRF+S+GD +
Sbjct: 285 YTFRIVDALVTNFHLPESTLLMLISALSDREHILKAYETAVREKYRFFSFGDAMFI 340
>gi|325290229|ref|YP_004266410.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Syntrophobotulus glycolicus DSM 8271]
gi|324965630|gb|ADY56409.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Syntrophobotulus glycolicus DSM 8271]
Length = 340
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 148/356 (41%), Positives = 203/356 (57%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FD+DLP IA PV PRD +RLMVV+ + L ++ F D +V
Sbjct: 1 MRVKDFDYDLPAELIAQHPVEPRDHSRLMVVNKEKGE---LFHALFKEIVDFFQPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKVI A+L GV+ +I L R ++W V +P K +K G + F
Sbjct: 58 VNKTKVIPARLFGVK----EGTGAKIEILLLNRKETDTWEVLVKPGKRLKIGQRVIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ RL +++ G ++ F G+ E + +G +PLPPYI K R Y
Sbjct: 111 -GEGRLIGELLEILPDGNRIIKFLYQGL-FENILDQLGQVPLPPYITEKLENQER----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT L+ ++ + G + + LHVG GTF PVK E+ +DH+M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTERLMDQIKAKGADIQEIVLHVGLGTFRPVKAENIEDHLM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E I A+ +N+ K+RG RI++VGTT R LE A +G + + +T+IFI PG
Sbjct: 225 HTEYYQIGLQAAETINAAKARGSRIIAVGTTVSRSLEAAAV-NGKVEAGASWTDIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+ VD L++NFH P+STLLMLVSA G E K Y+ A+ YRFYS+GD +
Sbjct: 284 YTFQIVDALITNFHFPRSTLLMLVSALAGQELMLKAYETAVREKYRFYSFGDAMFI 339
>gi|227524334|ref|ZP_03954383.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus hilgardii ATCC 8290]
gi|227088565|gb|EEI23877.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus hilgardii ATCC 8290]
Length = 352
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 143/351 (40%), Positives = 210/351 (59%), Gaps = 17/351 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+++FD+ LP IA P+ RD +RL+V++ + D ++ +LN DA+V N
Sbjct: 13 LEDFDYKLPHELIAQTPIKDRDESRLLVLNKETGD---MQDRRFYNIIDYLNPGDALVMN 69
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
++KV+ A++ GV+ I L + + W +P+K K G ++ F G
Sbjct: 70 DSKVMPARIYGVK----KDTGAHIEVLLLHNIEGDRWETLMKPAKRAKVGTVIGF----G 121
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ +L+A V + + G + F GI +E + +G PLPPYI K R YQT
Sbjct: 122 EGQLQAVVTKELDHGGREIEFKYEGIFIE-ILERLGETPLPPYIKEKLDDPNR----YQT 176
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YAK GS AAPTAGLH+T LL ++ G+ + ++TLHVG GTF PV+ ++ +DH MHS
Sbjct: 177 VYAKEMGSAAAPTAGLHWTKELLQKVADKGVHLVYLTLHVGLGTFRPVEEDNIEDHKMHS 236
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + ++ LN V+ GG+IV+ GTTS+R LET T+ +G I P SG+T+IFI PGY
Sbjct: 237 EFYRLSEEASKTLNDVRKNGGKIVATGTTSIRTLETVGTKFNGEIRPDSGWTDIFIKPGY 296
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+++ VD ++NFHLPKSTL+MLV++F G E YQHAIS YRF+S+GD
Sbjct: 297 QWQVVDSFITNFHLPKSTLVMLVASFTGRENILNAYQHAISEKYRFFSFGD 347
>gi|240013360|ref|ZP_04720273.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae DGI18]
gi|240120433|ref|ZP_04733395.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae PID24-1]
Length = 346
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 154/356 (43%), Positives = 208/356 (58%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V ++ PL D + DLP ++ + D +V
Sbjct: 1 MDISDFDFTLPEHLIAQHPPEVRGSSRLLVALSDM--PL--QDRVFGDLPDYVEAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDSG-----GRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 109 --EGGIRAVMVGR--EGELFCLRFEGGQTVYELLEQNGHLPLPPYI--ERAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + T A+ + K+RG + +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 223 HSEWFEVPSETVAAVEAAKARGNKAWAVGTTSMRALESAARATGYLKDGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF VD L++NFHLPKSTLLMLVSAF G+ + +Y+HAI YRF+SYGD +L
Sbjct: 283 YRFNVVDRLVTNFHLPKSTLLMLVSAFSGMGHIRAVYRHAIEREYRFFSYGDAMVL 338
>gi|257066399|ref|YP_003152655.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Anaerococcus prevotii DSM 20548]
gi|256798279|gb|ACV28934.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Anaerococcus prevotii DSM 20548]
Length = 340
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 147/356 (41%), Positives = 207/356 (58%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +EFD++LP S IA P RD AR+M++ + I D D+ +L D +V
Sbjct: 1 MRTEEFDYELPESLIAQHPSDKRDEARMMLLDKSTGD---IEDKHFFDIIDYLKPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L F H +++ I L + W V RP K +K G + FS
Sbjct: 58 MNDTRVIPARL----FGHREGKDESIEVFLLHNIKGKKWEVLVRPGKKMKIG-VEVIFSD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ L+A VID G ++ F+ GI + +G +PLPPYI K +D +Y
Sbjct: 113 E----LKAKVIDIKEDGNRVVEFTYEGI-FNEILDKLGNMPLPPYIKEK----LKDPEEY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GSVAAPTAGLHFT LL ++ GIK+ F+TL+VG GTF PV +D DH M
Sbjct: 164 QTVYSKNPGSVAAPTAGLHFTKELLKKIEEKGIKLAFLTLNVGLGTFRPVNEDDITDHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I TA +N K G R+++VGTTS+R LE+ + G I SG+T+IFI PG
Sbjct: 224 HSEFYTISQETADIINQAKREGNRVIAVGTTSIRTLESVYKKCGKIQEDSGWTDIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ ++ VD +++NFHLPKSTL+MLV+AF + Y++A+ YRF+S+GD +
Sbjct: 284 FEYKVVDAIITNFHLPKSTLIMLVAAFTSKKIILNAYEYAVKEKYRFFSFGDCMFI 339
>gi|154498091|ref|ZP_02036469.1| hypothetical protein BACCAP_02072 [Bacteroides capillosus ATCC
29799]
gi|150273081|gb|EDN00238.1| hypothetical protein BACCAP_02072 [Bacteroides capillosus ATCC
29799]
Length = 343
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 144/352 (40%), Positives = 202/352 (57%), Gaps = 16/352 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +F +DLP IA P+ RD +RLMV++ S H +LP FL D +V
Sbjct: 3 LKTSDFYYDLPQELIAQTPLDRRDGSRLMVLNKETG---ETSHHHFYELPNFLRPGDCLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+++V+ A+L G H + L + W RP + +K G L F
Sbjct: 60 LNDSRVLPARLLG----HREPTGGAVEVLLLIDRGNKVWECLVRPGRKVKPGTKLSF--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L A V+++ G L+ F GI LE + +G +PLPPYI + D Y
Sbjct: 113 -GDGLLTADVLEEVEGGNRLIEFHYEGIFLE-ILERLGKMPLPPYIKE----ELNDPERY 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ GS AAPTAGLHFT LL+++ ++G+++ +VTLHVG GTF PVK E+ DH M
Sbjct: 167 QTVYSREVGSAAAPTAGLHFTKELLAQIEAMGVRLAYVTLHVGLGTFRPVKEENITDHEM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E I TA +N K+ GGR++ VGTTS R +E+ EDG + +G+T+I+I PG
Sbjct: 227 HAEYCMISQKTADIINETKANGGRVICVGTTSCRTIESWAAEDGTLKESAGWTSIYIYPG 286
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
YRF+A+D L++NFHLP+STL+MLVSA G E Y A YRF+S+GD
Sbjct: 287 YRFKALDCLITNFHLPESTLVMLVSALAGRENILNAYAEAAREKYRFFSFGD 338
>gi|187930024|ref|YP_001900511.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ralstonia
pickettii 12J]
gi|238691819|sp|B2UC74|QUEA_RALPJ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|187726914|gb|ACD28079.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Ralstonia
pickettii 12J]
Length = 359
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 152/356 (42%), Positives = 210/356 (58%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FDFDLPP IA + R ++RL+ V + D +DL +L D +V
Sbjct: 2 LTLSDFDFDLPPELIAQTALPDRTASRLLAVRRTEDA-VHFEDRQFADLVDYLRPGDLLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A RF ++ + + ++ R SK +G L
Sbjct: 61 FNDTRVIKA-----RFFGHKASGGKVEVLVERLLDEHTVLAQIRSSKSPVEGTSLRL--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ TV + L F ++L I G +PLPPYI + D+ D Y
Sbjct: 113 --ADAFDVTVGPRAEPF-FTLRFPQPALDL---IEQYGRLPLPPYI--EHDPDSFDETRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF L ++L ++GI+ F+TLHVGAGTF PV+VE+ +H M
Sbjct: 165 QTVYARNPGAVAAPTAGLHFDDALFAKLDAMGIRRGFLTLHVGAGTFQPVRVENIAEHRM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I A+A+ + ++ GGR+++VGTTS+R LE+A DG +N SG T+IFITPG
Sbjct: 225 HSEWYEITPELAEAIRATRAAGGRVIAVGTTSMRALESAAQPDGTLNACSGETDIFITPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRFRAVD+L++NFHLPKSTLLMLVSAF G+ ++ YQHAI+ YRF+SYGD LL
Sbjct: 285 YRFRAVDLLVTNFHLPKSTLLMLVSAFAGMSAIREAYQHAIAQRYRFFSYGDAMLL 340
>gi|56421123|ref|YP_148441.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Geobacillus
kaustophilus HTA426]
gi|81557813|sp|Q5KWR3|QUEA_GEOKA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|56380965|dbj|BAD76873.1| S-adenosylmethionine tRNA ribosyltransferase [Geobacillus
kaustophilus HTA426]
Length = 342
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 152/362 (41%), Positives = 207/362 (57%), Gaps = 27/362 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF LP IA P+ R ++RLMV+ I ++ ++LN D +V
Sbjct: 1 MKVDLFDFHLPEELIAQTPLPDRAASRLMVLDKRTGA---IRHETFRNIISYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKE-----ISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
N+T+V+ A+L G EKE + L ++ + W +P K +K G L
Sbjct: 58 LNDTRVMPARLYG---------EKEETGGTVEVLLLKQLDGDRWETLVKPGKRVKPGTKL 108
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
F G+ +LEA +D G +L FS G+ E ++ +G +PLPPYI K R
Sbjct: 109 TF----GEGKLEAVCLDTLEHGGRVLEFSYDGLFYE-VLAELGEMPLPPYIKEKLDDPER 163
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
YQT YA+ GS AAPTAGLHFT LL + G+ + F+TLHVG GTF PV+V+D
Sbjct: 164 ----YQTVYAREIGSAAAPTAGLHFTEELLDAIREKGVHIVFITLHVGLGTFRPVQVDDV 219
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTN 294
+ H MH+E + TA+ LN V+ +GGRI++VGTTS R LET A +G SG+T+
Sbjct: 220 EKHDMHAEFYQMSEETAETLNRVREQGGRIIAVGTTSTRTLETIAGKHNGRFVAESGWTD 279
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PGY F+ +D L++NFHLPKSTL+MLVSA G E YQ A+ YRF+S+GD
Sbjct: 280 IFIYPGYEFKGIDGLVTNFHLPKSTLIMLVSALAGRENILHAYQVAVKERYRFFSFGDAM 339
Query: 355 LL 356
L+
Sbjct: 340 LI 341
>gi|302391490|ref|YP_003827310.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Acetohalobium arabaticum DSM 5501]
gi|302203567|gb|ADL12245.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Acetohalobium arabaticum DSM 5501]
Length = 341
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 138/359 (38%), Positives = 209/359 (58%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD+DLP IA +P PRD ++LMV+ I + + + + D +V
Sbjct: 1 MKVSDFDYDLPEELIAQQPAEPRDESQLMVLDRKTGE---IKERIFKKIIDLIEPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREK---EISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
NNT+VI A+L G ++EK ++ L ++W V RP + +K G + F
Sbjct: 58 LNNTEVIPARLYG-------KKEKTGGKVEFLLLTETELDTWEVLVRPGRKVKIGTRVVF 110
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
G + L A V D+ + G ++ F G+ + +G +PLPPYI ++ ++ R+
Sbjct: 111 ----GDNDLIAEVKDRTDFGGRVVEFEYKGV-FAEVLDKLGEMPLPPYITKE--LEERN- 162
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YA+ +G+ AAPTAGLHFT +L +L G+ + +TLHVG GTF PV+ ++ ++
Sbjct: 163 -QYQTVYAQKKGAAAAPTAGLHFTEEVLEQLEEKGVNIAAITLHVGLGTFRPVRADEVEE 221
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+E + A +N K GGRI++VGTT R LET ++G + G+T+IFI
Sbjct: 222 HDMHAEYYEVTDKAADTINQTKESGGRIIAVGTTVTRTLETVGNKEGYVEADKGWTDIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY F+ +D L++NFHLP+STL+M+V+AF G ++ YQ AI YRFYS+GD L+
Sbjct: 282 YPGYEFKVIDGLLTNFHLPESTLIMMVTAFAGYDKVMAAYQEAIDKEYRFYSFGDAMLI 340
>gi|307244210|ref|ZP_07526325.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Peptostreptococcus stomatis DSM 17678]
gi|306492360|gb|EFM64398.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Peptostreptococcus stomatis DSM 17678]
Length = 341
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 146/356 (41%), Positives = 196/356 (55%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R S+RLMVV N I + D+ +L D +V
Sbjct: 1 MKTSDFKYDLPEELIAQVPIEDRSSSRLMVVDKNTG---QIEHRVFKDIIDYLEEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G + + E L R ++W +P K K G F
Sbjct: 58 LNDTRVIPARLIGEKVGSGGKME----FLLLKRNEDDTWETLVKPGKRAKLGARFSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L A V+D G L+ F GI E + +G +PLPPYI K D Y
Sbjct: 111 -GGGKLFADVVDILEDGSRLVKFDYDGI-FEEILDELGNMPLPPYITEK----LEDKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT LL ++ + G+K FVTLHVG GTF PVKV+D H M
Sbjct: 165 QTVYSKHNGSAAAPTAGLHFTDQLLDQIRAKGVKTAFVTLHVGLGTFRPVKVDDVGQHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +N + + R++ VGTTS R +E+A+ DG + SG+T+IFI PG
Sbjct: 225 HSEFYMVTQEAADMINEARVKSKRVICVGTTSCRTIESASKPDGRLEAKSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ D L++NFHLP+STL+MLVSA E Y+ A+ YRF+S+GD L
Sbjct: 285 YKFKVCDNLITNFHLPESTLIMLVSALSSKENILNAYKSAVEERYRFFSFGDAMFL 340
>gi|262048629|ref|ZP_06021512.1| S-adenosylmethionine tRNA ribosyltransferase [Staphylococcus aureus
D30]
gi|259163276|gb|EEW47835.1| S-adenosylmethionine tRNA ribosyltransferase [Staphylococcus aureus
D30]
Length = 341
Score = 260 bits (664), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 150/357 (42%), Positives = 210/357 (58%), Gaps = 18/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHL-VSDLPAFLNSNDAI 59
M ++EFD+DLP S IA P+ RD + L+V+ HL D+ + D +
Sbjct: 1 MNIEEFDYDLPESLIAQTPLKDRDHSSLLVMDRETGE----MKHLHFKDIIEYFRPGDTL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 57 VLNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI K +D D
Sbjct: 111 --GNGKIIAECIKEMDQGGRIMRLHYEGI-LQERLDELGEMPLPPYI--KERLDDPDR-- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT LL + + G+ + FVTLHVG GTF PV V+D +DH
Sbjct: 164 YQTVYAKESGSAAAPTAGLHFTDELLIEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHE 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE + TA LN KS+G RI+SVGTTS R LET + SG+TNIFI P
Sbjct: 224 MHSEYYQMTQETADLLNDTKSKGHRIISVGTTSTRTLETIRRDHDKFVETSGWTNIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
G+ F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 284 GFDFKAIDGQITNFHLPKSTLVMLVSAFSSRENVLNAYKTAVNLEYRFFSFGDAMLI 340
>gi|81427982|ref|YP_394981.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus sakei subsp. sakei 23K]
gi|91207426|sp|Q38YQ8|QUEA_LACSS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|78609623|emb|CAI54669.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase
[Lactobacillus sakei subsp. sakei 23K]
Length = 343
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 149/350 (42%), Positives = 204/350 (58%), Gaps = 17/350 (4%)
Query: 4 KEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNN 63
++FD++LP IA P+ R ++RL+V+ + D + D+ LN DA+V NN
Sbjct: 5 EDFDYNLPEELIAQTPMIERAASRLLVMDHETGA---LEDKVFYDIIDELNPGDAVVMNN 61
Query: 64 TKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQ 123
T+V+ A+L GV+ E + H + W V +P+K K G + F G
Sbjct: 62 TRVLPARLYGVKPDTGGHEEVLLLNNTH----DDEWEVLMKPAKRAKVGTEVVF----GD 113
Query: 124 SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTT 183
+L A V + G ++ F GI ++ + +G +PLPPYI K D YQT
Sbjct: 114 GQLRAIVTKELEHGGRMIEFKYDGIFMQI-LEALGEMPLPPYIKEK----LDDPEMYQTV 168
Query: 184 YAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSE 243
YAK GS AAPTAG H+T LL ++ GIK+ ++TLHVG GTF PV ++ +DH MHSE
Sbjct: 169 YAKEPGSAAAPTAGFHWTEELLQKVQDKGIKLVYLTLHVGLGTFRPVSEDNVEDHKMHSE 228
Query: 244 IGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITPGYR 302
+ A LN VK GGRIV+ GTTS+R LET AT DG I SG+T IFI PGY+
Sbjct: 229 FYRLTEEAAATLNEVKQNGGRIVATGTTSIRTLETIATKFDGEIKADSGWTEIFIKPGYQ 288
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
++AVD ++NFHLPKSTL+MLV++F G E YQHA+ YRF+S+GD
Sbjct: 289 WKAVDAFITNFHLPKSTLVMLVASFTGRENILNAYQHAVDERYRFFSFGD 338
>gi|315650365|ref|ZP_07903437.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Eubacterium
saburreum DSM 3986]
gi|315487476|gb|EFU77786.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Eubacterium
saburreum DSM 3986]
Length = 345
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 146/352 (41%), Positives = 200/352 (56%), Gaps = 16/352 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+F +DLP IA P+ R S+RL+V+ + I+ D+ +L+ D +V
Sbjct: 5 MDVKDFRYDLPQELIAQDPLEDRSSSRLLVLDKDTG---EITHKHFYDIIDYLDEGDCLV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKVI A+L GV+ + L R S W +P K + G ++ F
Sbjct: 62 LNETKVIPARLMGVK----KDTGAVVEILLLKRKSKTVWECLVKPGKKCRVGAVIEF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L TV D G ++ F GI E + +GT+PLPPYI +D Y
Sbjct: 115 -GEGLLTGTVSDIVEEGNRIIEFEFDGI-FEEILDKLGTMPLPPYITHT----LKDRNRY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + G+K+ VTLHVG GTF PVKV D H M
Sbjct: 169 QTVYAKNDGSAAAPTAGLHFTKELLKDIEDKGVKLAKVTLHVGLGTFRPVKVSDVRQHHM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +NS ++ G R++ VGTTS R +E+A+ + G + SG+T+IFI PG
Sbjct: 229 HSEFFQVSKEAADIINSTRANGKRVICVGTTSTRTVESASDDKGYLKETSGWTDIFIYPG 288
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
Y+F+ +D L++NFHLP+STL+MLVSA G E+ Y+ A+ YRF+S+GD
Sbjct: 289 YKFKVLDALITNFHLPESTLVMLVSALAGREKVLHAYEEAVKEKYRFFSFGD 340
>gi|309781308|ref|ZP_07676044.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ralstonia
sp. 5_7_47FAA]
gi|308919721|gb|EFP65382.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ralstonia
sp. 5_7_47FAA]
Length = 356
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 152/356 (42%), Positives = 210/356 (58%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FDFDLPP IA + R ++RL+ V + D +DL +L D +V
Sbjct: 2 LTLSDFDFDLPPELIAQTALPDRTASRLLAVR-RAGDAVHFEDRQFADLVDYLRPGDLLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A RF ++ + + ++ R SK +G L
Sbjct: 61 FNDTRVIKA-----RFFGQKASGGKVEVLVERLLDEHTVLAQIRSSKSPVEGTTLRL--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ TV + L F ++L I G +PLPPYI + ++ D Y
Sbjct: 113 --ADAFDVTVGPRAEPF-FTLRFPQPALDL---IEQYGRLPLPPYI--EHDPNSFDETRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF L ++L ++GI+ F+TLHVGAGTF PV+VE+ +H M
Sbjct: 165 QTVYARNPGAVAAPTAGLHFDDALFAKLDAMGIQRGFLTLHVGAGTFQPVRVENIAEHRM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I A+A+ + ++ GGRI++VGTTS+R LE+A DG +N SG T+IFITPG
Sbjct: 225 HSEWYEITPELAEAIRATRAAGGRIIAVGTTSMRALESAAQPDGTLNACSGETDIFITPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRFRAVD+L++NFHLPKSTLLMLVSAF G+ ++ YQHAI+ YRF+SYGD LL
Sbjct: 285 YRFRAVDLLVTNFHLPKSTLLMLVSAFAGMSAIREAYQHAIAQRYRFFSYGDAMLL 340
>gi|225023925|ref|ZP_03713117.1| hypothetical protein EIKCOROL_00791 [Eikenella corrodens ATCC
23834]
gi|224943399|gb|EEG24608.1| hypothetical protein EIKCOROL_00791 [Eikenella corrodens ATCC
23834]
Length = 343
Score = 259 bits (663), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 155/361 (42%), Positives = 209/361 (57%), Gaps = 29/361 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA +P R S+RL+ + ++ D L ++LP L + D +V
Sbjct: 1 MQLADFDFHLPEHLIAQQPPEQRGSSRLL----DARSGDLLCDRLFAELPNLLEAGDLLV 56
Query: 61 FNNTKVITAQL-----NGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
FNNTKV+ A+L +G R + R + C L + R SK K G +L
Sbjct: 57 FNNTKVMKARLFGHKASGGRIEALIERVLDEHCAL----------AHIRSSKSPKPGSLL 106
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
F DG R + + GE+ + + + + + G +PLPPYI +R DA
Sbjct: 107 EF---DGGIRAQM----EEREGELFKLRFSGSLNVYQILEQTGRLPLPPYI--ERAADAA 157
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT YAK QG+VAAPTAGLHFT LL++L + GI +TLHVGAGTF PV+ E+
Sbjct: 158 DDERYQTIYAKHQGAVAAPTAGLHFTPELLNQLQANGIHRAEITLHVGAGTFQPVRSENI 217
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+H MH E I T +A+ K+ G R+ +VGTTS+R LE A ++ + G T+I
Sbjct: 218 VEHKMHKEWYSIPTETVEAIAETKANGKRVWAVGTTSMRSLE-AAAQNSHLQAGEGDTDI 276
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRF+ D L++NFHLPKSTLLMLVSAF G+E + Y+HAI YRF+SYGD L
Sbjct: 277 FITPGYRFQVADGLITNFHLPKSTLLMLVSAFSGVEHIRAAYRHAIEQQYRFFSYGDAML 336
Query: 356 L 356
L
Sbjct: 337 L 337
>gi|313892068|ref|ZP_07825666.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Dialister
microaerophilus UPII 345-E]
gi|329120931|ref|ZP_08249563.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Dialister
micraerophilus DSM 19965]
gi|313119520|gb|EFR42714.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Dialister
microaerophilus UPII 345-E]
gi|327471390|gb|EGF16841.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Dialister
micraerophilus DSM 19965]
Length = 339
Score = 259 bits (663), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 142/356 (39%), Positives = 211/356 (59%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++ F+++LP S IA PV PRDS +LMV+ +S H+ +D+ + ND IV
Sbjct: 1 MKLENFNYELPESLIAQEPVEPRDSCKLMVLDKETGH---LSHHVFTDILDEIKENDLIV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+LNG R + ++ L + W V P + G + F
Sbjct: 58 FNNTKVIPARLNGYR----KQTGGKVEVLLLTPKGNDEWEVLVNPGRKALIGQEIIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ V+DK + G + F G + + + VG +P+PPYI +K ++ +Y
Sbjct: 111 --SDKFYCVVLDKTDFGGRRVKFYYDG-DFDLLLDEVGEMPIPPYIHKK----LKNKEEY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFTS L++++ G ++ FVTLHVG GTF PV E+ +DH M
Sbjct: 164 QTVYAKYKGSAAAPTAGLHFTSELINKIKEKGAEICFVTLHVGLGTFRPVNEENIEDHEM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I TA A+N K G RI++VGTTS+R LE+A + G + + +TN++I PG
Sbjct: 224 HKEWYVISEQTADAINKAKKEGRRIIAVGTTSVRTLESA-GQSGKLKAGANWTNLYIYPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y ++ VD +++NFHLP+STLLM++++F G ++ Y+ A++ YRF+S+GD L
Sbjct: 283 YSWKIVDAIITNFHLPESTLLMMMASFVGTDKILNAYKEAVAKKYRFFSFGDAMFL 338
>gi|166032600|ref|ZP_02235429.1| hypothetical protein DORFOR_02315 [Dorea formicigenerans ATCC
27755]
gi|166026957|gb|EDR45714.1| hypothetical protein DORFOR_02315 [Dorea formicigenerans ATCC
27755]
Length = 341
Score = 259 bits (663), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 147/356 (41%), Positives = 197/356 (55%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F +DLP IA P+ R S+RL+V+ S H+ ++ +L D +V
Sbjct: 1 MKRQDFYYDLPEELIAQDPLEDRSSSRLLVLDKETGA---TSHHIFKEITGYLKEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + +I L R N W +P K K G + F
Sbjct: 58 INDTKVIPARLIGAK----EGTGAKIEILLLKRKENNIWETLVKPGKKAKVGTRIVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L V+ G L+ F GI E + +G +PLPPYI + D Y
Sbjct: 111 -GEGLLVGEVVGIVEEGNRLVKFEYEGI-FEEILDQLGQMPLPPYITHQ----LEDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + GI + VTLHVG GTF PVKV++ DH M
Sbjct: 165 QTVYAKHTGSAAAPTAGLHFTPELLKEIEEKGIDIARVTLHVGLGTFRPVKVDEITDHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D A+ +N K G R++ VGTTS R +E+A E G + P SG+T IFI PG
Sbjct: 225 HSEFYQVDEEAAEKINRAKDSGHRVICVGTTSCRTIESAADETGHLKPTSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD L+
Sbjct: 285 YKFKILDGLITNFHLPESTLIMLVSALAGREHVLAAYEEAVQERYRFFSFGDAMLI 340
>gi|329577860|gb|EGG59281.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX1467]
Length = 343
Score = 259 bits (663), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 153/353 (43%), Positives = 208/353 (58%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++FDFDLP IA P+ R S+RL+VV+ + D D+ L DA+V
Sbjct: 2 LSTEDFDFDLPEELIAQTPLKDRASSRLLVVNKETGD---MEDKHFHDIHDELQPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N T+V+ A+L G + + L ++W +P+K K G + F
Sbjct: 59 MNITRVLPARLYGEK----PETGGHLEVLLLTNTEGDTWETLIKPAKRAKVGTEIQF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A V ++ G ++ F GI LE SL G +PLPPYI K +D D Y
Sbjct: 112 -GDGRLKAVVKEELEHGGRIIEFKYDGIFLEILESL-GEMPLPPYI--KERLDDPDR--Y 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GS AA TAGLHFT LL + + G+ + ++TLHVG GTF PV V++ ++H M
Sbjct: 166 QTVYAEENGSAAASTAGLHFTKELLEEIKAKGVHLVYLTLHVGLGTFRPVSVDNIEEHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A+ LN V+ GGRIV+VGTTS+R LET T+ +G I SG+T+IFITP
Sbjct: 226 HSEFYRLTEEAAKQLNEVRQAGGRIVAVGTTSIRTLETIGTKFNGEIQADSGWTDIFITP 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY+F+ V+ +NFHLPKSTL+MLVSAF G + T YQHAI YRF+S+GD
Sbjct: 286 GYQFKVVEAFSTNFHLPKSTLVMLVSAFAGKDLTLAAYQHAIEEKYRFFSFGD 338
>gi|323341474|ref|ZP_08081715.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus ruminis ATCC 25644]
gi|323091085|gb|EFZ33716.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus ruminis ATCC 25644]
Length = 350
Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 145/358 (40%), Positives = 211/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++FD+DLP IA P+ RD +RL+V+ D ++ LN DA+V
Sbjct: 9 LTTEDFDYDLPQELIAQTPLKERDQSRLLVLDSKTGK---YQDDYFYNVIDRLNPGDALV 65
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+++V+ A+L GV+ + L ++W +P+K K G + F
Sbjct: 66 MNDSRVMPARLYGVK----PETGGHVEVLLLNNTDGDNWETLVKPAKRAKVGTEISF--- 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L ATV ++ G ++ F GI +E + +G +PLPPYI K D Y
Sbjct: 119 -GDGKLTATVTEELEHGGRMIEFHYDGIFME-ILDQLGEMPLPPYIKEK----LDDPEMY 172
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ GS AAPTAGLHFT+ LL ++ G+K+ ++TLHVG GTF PV E+ +DH M
Sbjct: 173 QTVYSREIGSAAAPTAGLHFTTELLKKIEDKGVKLVYLTLHVGLGTFRPVSEENIEDHKM 232
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A+ LN VK+ GGRIV+ GTTS+R LET T+ +G I SG+T+IFI P
Sbjct: 233 HSEFYRLTEDAAKTLNEVKANGGRIVATGTTSIRTLETIGTKFNGEIRADSGWTDIFIKP 292
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY+++ VD ++NFHLPKSTL+MLV++F G E Y+HA+S YRF+S+GD ++
Sbjct: 293 GYKWQVVDAFITNFHLPKSTLVMLVASFTGRENILNAYRHAVSEKYRFFSFGDAMFIY 350
>gi|289550595|ref|YP_003471499.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus lugdunensis HKU09-01]
gi|289180127|gb|ADC87372.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus lugdunensis HKU09-01]
Length = 341
Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 148/356 (41%), Positives = 215/356 (60%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++FD+ LP S IA P+ RD +RL+V+ N + H D+ +LN D +V
Sbjct: 1 MNIEDFDYHLPESLIAQTPLKNRDQSRLLVL--NKETGDMKHQHF-KDVINYLNPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L GV+ ++ + ++ N W V +P+K IK G+ L F
Sbjct: 58 LNDTRVMPARLFGVK----EETGAKVEMLMLTQIENNDWEVLLKPAKRIKVGNQLSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ ++ A I + + G ++ GI L+ ++ +G +PLPPYI K +D D Y
Sbjct: 111 -GEGKIIAECIKELDQGGRIMRLHYEGI-LQERLDELGEMPLPPYI--KARLDDPDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT NLL + + G+ + F+TLHVG GTF PV VE+ ++H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTDNLLKDIKAKGVNIAFITLHVGLGTFRPVSVENINEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA+ LN+ K +G RI++VGTTS R LET + SG+T+IFI PG
Sbjct: 225 HSEYYQMTENTAKLLNNTKLQGHRIIAVGTTSTRTLETIRRDHSQFIATSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ F+A+D L++NFHLPKSTL+MLVSAF + Y+ A+ YRF+S+GD L+
Sbjct: 285 FEFKAIDALITNFHLPKSTLVMLVSAFSSRQFILTAYRKAVELEYRFFSFGDAMLI 340
>gi|260893432|ref|YP_003239529.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Ammonifex
degensii KC4]
gi|260865573|gb|ACX52679.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Ammonifex
degensii KC4]
Length = 343
Score = 259 bits (662), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 147/353 (41%), Positives = 201/353 (56%), Gaps = 16/353 (4%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+F++ LP IA P+ RD +RLMVV+ + L DLP +L D +V N T
Sbjct: 7 DFEYYLPKELIAQEPLPERDKSRLMVVYRDREE---FEHRLFRDLPEYLVPGDVLVLNRT 63
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQS 124
+V+ A+L GV+ ++ L ++ P+ W V RP + + +G + F G
Sbjct: 64 RVLPARLYGVK----EDTGGKVEVLLLRQLEPDLWEVLVRPGRRVPEGTRIVF----GGG 115
Query: 125 RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTY 184
L V+ + +G L+ F+ G + + +G IPLPPYI RK R YQT Y
Sbjct: 116 LLRGEVLSRLESGGRLVRFTYEG-DFFALLHQLGEIPLPPYIKRKLAEPER----YQTVY 170
Query: 185 AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEI 244
A GS AAPTAGLHFT LL +L G++V +TLH+G TF PVK ED H MHSE
Sbjct: 171 ASEPGSAAAPTAGLHFTPELLQKLQEKGVEVVTLTLHIGLDTFRPVKEEDITAHRMHSEE 230
Query: 245 GFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFR 304
+ TA+A+N K G RIV+VGTT +R LE+ E G + GFT++FI PGYRF+
Sbjct: 231 YHLPEATAEAVNRAKEEGRRIVAVGTTVVRCLESVADERGRVRAGRGFTDLFIYPGYRFK 290
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
VD L++NFHLP STLLMLV+AF G E+ + Y A+ YRF+S+GD L+
Sbjct: 291 VVDALVTNFHLPGSTLLMLVAAFAGREKILRAYAEAVRLRYRFFSFGDAMLIL 343
>gi|311031510|ref|ZP_07709600.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
sp. m3-13]
Length = 342
Score = 259 bits (662), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 148/357 (41%), Positives = 206/357 (57%), Gaps = 15/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ N + + + ++ D +V
Sbjct: 1 MKIDLFDFHLPEELIAQTPLEQREASRLMVL--NKKTGNLTHEPTFRSILDYVKEGDCLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L GV+ + +I L ++ ++W +P+K +K+G ++ F
Sbjct: 59 LNDTRVLPARLFGVK----SETGAKIEVLLLKQLEGDTWETLIKPAKRVKEGTVVSF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A + G L F GI E SL G +PLPPYI K ++ RD Y
Sbjct: 112 -GDGRLTAICTGESEHGGRKLDFRYEGIFYEVLDSL-GEMPLPPYI--KEQLEDRDR--Y 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ GS AAPTAGLHFT LL L G+ F+TLHVG GTF PV V+ ++H M
Sbjct: 166 QTVFARETGSAAAPTAGLHFTEELLDALKDKGVHTAFITLHVGLGTFRPVSVDSVEEHDM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + TA+ LN V+S GGRI++VGTTS R LET + G SG+TNIFI PG
Sbjct: 226 HAEFYQMSEGTARLLNEVRSNGGRIITVGTTSTRTLETIARDHGEFKEASGWTNIFIYPG 285
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F A+D +++NFHLPKSTL+MLVSA G E Y+ A+ YRF+S+GD L+
Sbjct: 286 YNFSAIDGMITNFHLPKSTLIMLVSALAGRENVMHAYEEAVKERYRFFSFGDAMLIL 342
>gi|241895532|ref|ZP_04782828.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Weissella
paramesenteroides ATCC 33313]
gi|241871110|gb|EER74861.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Weissella
paramesenteroides ATCC 33313]
Length = 348
Score = 259 bits (662), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 144/355 (40%), Positives = 210/355 (59%), Gaps = 17/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FD++LP IA P+ RD +RL+ ++ + + D D+ +LN DA+V N
Sbjct: 8 LNDFDYELPHELIAQTPLERRDGSRLLELNADTGE---LHDRHFYDIIDYLNPGDALVMN 64
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
N++V+ A+L GVR + L + + W +P++ G + F G
Sbjct: 65 NSRVLPARLYGVR----PETGGHVEVLLLRQEKDDVWETLVKPARKYPVGQKIVF----G 116
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+L A VI++ G ++ F GI LE + +G +PLPPYI K R YQT
Sbjct: 117 DGQLTAEVIEELEHGGRMIKFHYDGIFLE-ILEELGEMPLPPYIKEKLADQER----YQT 171
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
Y+K+ GS AAPTAGLH+T LL ++ GIK+ +TLHVG GTF PV+ ++ DDH MHS
Sbjct: 172 VYSKVNGSAAAPTAGLHWTPELLQKVADKGIKLVELTLHVGLGTFRPVEEDNIDDHKMHS 231
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + AQ LN V++ GGRIV+ GTTS+R LET + DG ++ SG+T+IFI PG+
Sbjct: 232 EFYQLSEEAAQTLNEVRANGGRIVATGTTSIRTLETIGAKFDGELHADSGWTDIFIKPGF 291
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+R VD ++NFHLPKSTL+MLV+AF G + Y+HA++ YRF+S+GD +
Sbjct: 292 EWRVVDAFITNFHLPKSTLVMLVAAFTGRDNILNAYKHAVAEKYRFFSFGDAMFI 346
>gi|293397754|ref|ZP_06641960.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae F62]
gi|291611700|gb|EFF40769.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae F62]
Length = 356
Score = 259 bits (662), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 207/356 (58%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V ++ PL D + DLP ++ + D +V
Sbjct: 11 MDISDFDFTLPEHLIAQHPPEVRGSSRLLVALSDM--PL--QDRVFGDLPDYVEAGDVLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 67 FNNTKVMKARLFGQKDSG-----GRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 119 --EGGIRAVMVGR--EGELFCLRFEGGQTVYELLEQNGHLPLPPYI--ERAADADDDSRY 172
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 173 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 232
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + T A+ + K+RG + +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 233 HSEWFEVPSETVAAVEAAKARGNKAWAVGTTSMRALESAARATGYLKDGQGDTDIFITPG 292
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF VD L++NFHLPKSTLLMLV AF G+ + +Y+HAI YRF+SYGD +L
Sbjct: 293 YRFNVVDRLVTNFHLPKSTLLMLVGAFSGMGHIRAVYRHAIEREYRFFSYGDAMVL 348
>gi|313901951|ref|ZP_07835368.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Thermaerobacter subterraneus DSM 13965]
gi|313467797|gb|EFR63294.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Thermaerobacter subterraneus DSM 13965]
Length = 358
Score = 259 bits (662), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 146/359 (40%), Positives = 215/359 (59%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V EFD+DLPP IA +P+ RD++RLMVV + L DLP FL + D +V
Sbjct: 1 MRVDEFDYDLPPELIAQQPLARRDASRLMVVDRDTGRWLHAR---FRDLPRFLRAGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V A+L G R ++ L + W ARP + ++ G +
Sbjct: 58 LNDTRVRPARLYGRRPTG-----GQVEFLLLQPLDGGRWLALARPGRRVRPGTEVVC--- 109
Query: 121 DGQSR-LEATVIDKWNTGE-ILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
G+ R L V + ++GE ++ + G ++ + +G +PLPPYI + D
Sbjct: 110 -GEERPLRVYVEEARDSGERVIRLEPPPGETVDETLHRLGRVPLPPYIR----AELEDPE 164
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YA+ +GSVAAPTAGLHFT LL RL G+++ ++TLHVG GTF PV E ++H
Sbjct: 165 RYQTVYAREEGSVAAPTAGLHFTPELLKRLQDQGVRIAYLTLHVGVGTFRPVTAERVEEH 224
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E ++ A+A+N+ ++ GGR+++VGTT R LET G + P SG+T++FI
Sbjct: 225 QMHAEFYRVEPAAAEAINAARAAGGRVIAVGTTVTRTLETVAAAGGTVRPGSGWTDLFIY 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGYRF+A+D L++NFHLP+STL+MLV+A G E+T Y+ A++ YRF+S+GD L+
Sbjct: 285 PGYRFKAIDGLITNFHLPRSTLIMLVAALLGKEQTLAAYREAVARRYRFFSFGDAMLIL 343
>gi|242373940|ref|ZP_04819514.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus epidermidis M23864:W1]
gi|242348294|gb|EES39896.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus epidermidis M23864:W1]
Length = 347
Score = 259 bits (662), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 146/355 (41%), Positives = 211/355 (59%), Gaps = 18/355 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHL-VSDLPAFLNSNDAIVF 61
++EFD+ LP S IA P+ RD +RL+V+ HL D+ +LN D +V
Sbjct: 9 IEEFDYHLPESLIAQTPLKNRDQSRLLVLQRETGE----MAHLHFKDVIDYLNPGDTLVL 64
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L F
Sbjct: 65 NDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNRLSF---- 116
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G ++ A + + G ++ GI L+ ++ +G +PLPPYI K +D D YQ
Sbjct: 117 GDGKIVAECVKELEQGGRIMRLHYEGI-LQERLDELGEMPLPPYI--KERLDDPDR--YQ 171
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YAK GS AAPTAGLHFT LL ++ + G+ + F+TLHVG GTF PV V++ DDH MH
Sbjct: 172 TVYAKESGSAAAPTAGLHFTEALLDQIKAKGVNITFITLHVGLGTFRPVSVDNIDDHEMH 231
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
SE + + TA+ LN ++ G RI+SVGTTS R LET + SG+T+IFI PG+
Sbjct: 232 SEYYQMTSETAELLNQTRANGNRIISVGTTSTRTLETIRRDHEQFVEKSGWTDIFIYPGF 291
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
++A+D L++NFHLPKSTL+MLVSAF + YQ A+ YRF+S+GD L+
Sbjct: 292 EYKAIDGLITNFHLPKSTLVMLVSAFSTRDNILNAYQTAVEMKYRFFSFGDAMLI 346
>gi|226323649|ref|ZP_03799167.1| hypothetical protein COPCOM_01424 [Coprococcus comes ATCC 27758]
gi|225207833|gb|EEG90187.1| hypothetical protein COPCOM_01424 [Coprococcus comes ATCC 27758]
Length = 341
Score = 259 bits (661), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 147/361 (40%), Positives = 201/361 (55%), Gaps = 26/361 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F FDLP IA P+ R S+RL+V+ S H+ ++ +L D +V
Sbjct: 1 MKRQDFYFDLPEELIAQDPLEDRSSSRLLVLDKKTGA---TSHHIFREIKDYLKPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKE-----ISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
N+TKVI A+L G EKE + L R + W +P K +K G +
Sbjct: 58 INDTKVIPARLIG---------EKEGTGGKVEVLLLKRKGNDVWETLVKPGKKMKPGARV 108
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
F G L+ V++ G L+ F GI E + +G +PLPPYI +
Sbjct: 109 SF----GDGLLKGEVLEVVEEGNRLIHFEYEGI-FEEILDQLGQMPLPPYITHQ----LE 159
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT YAK GS AAPTAGLHFT LL + + G+++ VTLHVG GTF PVK +D
Sbjct: 160 DKNRYQTVYAKHSGSAAAPTAGLHFTPELLEEIKAEGVEIAHVTLHVGLGTFRPVKADDI 219
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
DH MHSE I+A A+ +N K G R++ VGTTS R +E+A E+G + SG+T I
Sbjct: 220 LDHHMHSEFYRIEASEAEKINRAKESGHRVICVGTTSCRTVESAADENGKLKECSGWTEI 279
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGY+F+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD
Sbjct: 280 FIYPGYKFKVLDCLITNFHLPESTLIMLVSALAGREHVLAAYEEAVKERYRFFSFGDAMF 339
Query: 356 L 356
+
Sbjct: 340 I 340
>gi|59800514|ref|YP_207226.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae FA 1090]
gi|75432620|sp|Q5FAH3|QUEA_NEIG1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|59717409|gb|AAW88814.1| putative s-adenosyl methionine:tRNA ribosyltransferase-isomerase
[Neisseria gonorrhoeae FA 1090]
Length = 346
Score = 259 bits (661), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 207/356 (58%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V ++ PL D + DLP ++ + D +V
Sbjct: 1 MDISDFDFTLPEHLIAQHPPEVRGSSRLLVALSDM--PL--QDRVFGDLPDYVEAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDSG-----GRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 109 --EGGIRAVMVGR--EGELFCLRFEGGQTVYELLEQNGHLPLPPYI--ERAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + T A+ + K+RG + +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 223 HSEWFEVPSETVAAVEAAKARGNKAWAVGTTSMRALESAARATGYLKDGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF VD L++NFHLPKSTLLMLV AF G+ + +Y+HAI YRF+SYGD +L
Sbjct: 283 YRFNVVDRLVTNFHLPKSTLLMLVGAFSGMGHIRAVYRHAIEREYRFFSYGDAMVL 338
>gi|261366941|ref|ZP_05979824.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Subdoligranulum variabile DSM 15176]
gi|282571058|gb|EFB76593.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Subdoligranulum variabile DSM 15176]
Length = 342
Score = 259 bits (661), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 147/359 (40%), Positives = 204/359 (56%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+ K+F +DLP IA P PRD+ARLMV++ I + DLP +L D +V
Sbjct: 1 MLKKDFWYDLPKELIAQEPAEPRDAARLMVLNRKND---TIEHAIFHDLPKYLEKGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHM--RVSPNSWSVYARPSKVIKKGDILHFF 118
NN+KV+ A+L G + C L + +V ++W ARP K ++ G + F
Sbjct: 58 VNNSKVLPARLLGTKV------PTGAVCELLLLRQVKGDTWECLARPGKRMQPGTKVTF- 110
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
G L A V + G + F+ L ++ G +PLPPYI ++ D
Sbjct: 111 ---GDGTLTAVVDETMPDGNKFVTFTYDTETLYEKLDEFGKMPLPPYITKQ----LEDQS 163
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YAK GS AAPTAGLHFT LL + + G+ + VTLHVG GTF PV E+ +DH
Sbjct: 164 QYQTVYAKELGSAAAPTAGLHFTPELLDTIRANGVNIAEVTLHVGLGTFRPVNEEEIEDH 223
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE + TA A+N+ ++ G R+++VGTTS R LE + G I P SG T+IFI
Sbjct: 224 QMHSEWYSVSEDTANAINATRASGHRVIAVGTTSCRTLEAVWAKYGKIVPCSGNTDIFIY 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG A+D +++NFHLP+STL+ML+SAF G E+T Y+ A+ YRF+S+GD L+
Sbjct: 284 PGIDLHAIDGMITNFHLPESTLIMLISAFYGYEKTMAAYKVAVEEKYRFFSFGDAMLIL 342
>gi|149178742|ref|ZP_01857325.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Planctomyces maris DSM 8797]
gi|148842440|gb|EDL56820.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Planctomyces maris DSM 8797]
Length = 351
Score = 259 bits (661), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 150/361 (41%), Positives = 208/361 (57%), Gaps = 19/361 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FD+ LPP IA P RD +RL+++ I+ +SDLP +LN +D +V N
Sbjct: 4 LNDFDYQLPPELIATEPTQQRDQSRLLILDRKSQS---ITHGSISDLPRYLNPDDCLVLN 60
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS---WSVYARPSKVIKKGDILHFFS 119
NT+V++A+L G R + E + + NS W + ++ + GDI+
Sbjct: 61 NTRVLSARLFGTRQSTGGKWEG-------LYLGSNSLGEWKLMSKTRGKLNPGDIIELRP 113
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLV---GTIPLPPYIARKRPIDARD 176
Q LE V K + + ++ E SL+ GT+PLPPY+ R + D
Sbjct: 114 AH-QRSLEKQVTLKLLSKDTEGYWTALVKSDEDHHSLLAHFGTMPLPPYMKRNLATE-ED 171
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+ YQT YA G+VAAPTAGLHFT LL R + G ++ VTLHVG GTF P+ VE +
Sbjct: 172 WERYQTVYAAQPGAVAAPTAGLHFTPELLERCTAQGTRIANVTLHVGIGTFKPISVETLE 231
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H MHSE + A +A+ LN + +GGRIV VGTTS+R LE+ + G + W G T+IF
Sbjct: 232 AHKMHSEWCELSAESAELLNQSRQQGGRIVCVGTTSVRTLES-VAQQGPLQAWQGETDIF 290
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y+F+AVD L++NFHLPKSTLL+LVSAF G E + Y+ A+ YRFYSYGD L+
Sbjct: 291 IYPPYQFQAVDCLLTNFHLPKSTLLVLVSAFAGAEFICEAYKKAVEAEYRFYSYGDAMLI 350
Query: 357 F 357
Sbjct: 351 L 351
>gi|331701282|ref|YP_004398241.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus buchneri NRRL B-30929]
gi|329128625|gb|AEB73178.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus buchneri NRRL B-30929]
Length = 346
Score = 259 bits (661), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 146/351 (41%), Positives = 210/351 (59%), Gaps = 17/351 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+++FD+DLP IA P+ RD +RL+V+ + D ++ +LN DA+V N
Sbjct: 7 LEDFDYDLPHELIAQTPIKDRDESRLLVLDKESGE---MQDRHFYNIIDYLNPGDALVMN 63
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
++KV+ A++ GV+ E L + + W +P+K K G +++F G
Sbjct: 64 DSKVMPARIYGVKADTGGHME----VLLLHNIEGDRWETLMKPAKKAKVGTVINF----G 115
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+L+A V + + G + F GI +E + +G PLPPYI K +D D YQT
Sbjct: 116 DGQLKAVVTKELDHGGREIEFQYDGIFIE-ILERLGETPLPPYIKEK--LDDPDR--YQT 170
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YAK GS AAPTAGLH+T +LL ++ G+ + ++TLHVG GTF PV E+ +DH MHS
Sbjct: 171 VYAKEMGSAAAPTAGLHWTKDLLKKVEDKGVHLVYLTLHVGLGTFRPVDEENIEDHKMHS 230
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + A LN+V+ G+IV+ GTTS+R LET T+ DG I P SG+T+IFI PGY
Sbjct: 231 EFYRLSDQAAATLNAVRDNSGKIVATGTTSIRTLETVGTKFDGQIRPDSGWTDIFIKPGY 290
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
++R V+ ++NFHLPKSTL+MLV++F G E YQHAI YRF+S+GD
Sbjct: 291 QWRVVNSFITNFHLPKSTLVMLVASFTGRENILNAYQHAIDEKYRFFSFGD 341
>gi|325479477|gb|EGC82573.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Anaerococcus prevotii ACS-065-V-Col13]
Length = 340
Score = 259 bits (661), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 145/356 (40%), Positives = 206/356 (57%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++FD+ LP IA P RD AR+MV+ I + D+ +LN D +V
Sbjct: 1 MKTEDFDYYLPEDLIAQHPSDKRDEARMMVLDKKTG---EICNKYFYDVIDYLNPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L F H + +++ I L + W V RP K +K G + F
Sbjct: 58 MNDTRVIPARL----FGHRDGKDESIEVFLLHNIEGKKWEVLVRPGKKMKIGTEVIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A VID G ++ FS +GI + +G +PLPPYI K +D +Y
Sbjct: 111 --SDELSAKVIDIKEDGNRVVEFSYAGI-FNEILDKLGNVPLPPYIKEK----LKDPEEY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GSVAAPTAGLHFT +LL ++ G+K+ F+TL+VG GTF PV ED DH M
Sbjct: 164 QTVYSKNPGSVAAPTAGLHFTKDLLKKIEEKGVKLAFLTLNVGLGTFRPVNEEDITDHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ TA+ +N K +I++VGTTS+R LE+ + G I SG+T+IFI PG
Sbjct: 224 HSEFYTLNKETAEIINQAKKNNKKIIAVGTTSIRTLESVYKKCGEIREDSGWTDIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ ++ VD +++NFHLPKSTL+MLV+AF + Y +A+ YRF+S+GD L+
Sbjct: 284 FEYKVVDSVITNFHLPKSTLIMLVAAFTSKDIILNAYNYAVKEKYRFFSFGDCMLI 339
>gi|229824967|ref|ZP_04451036.1| hypothetical protein GCWU000182_00316 [Abiotrophia defectiva ATCC
49176]
gi|229790970|gb|EEP27084.1| hypothetical protein GCWU000182_00316 [Abiotrophia defectiva ATCC
49176]
Length = 341
Score = 259 bits (661), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 144/364 (39%), Positives = 208/364 (57%), Gaps = 32/364 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F ++LP IA P+ R ++RL+V+ + + SD+ +LN D +V
Sbjct: 1 MKTSDFFYELPEELIAQDPLEDRTASRLLVLDRKTDK---LEHKIFSDVIDYLNPGDCLV 57
Query: 61 FNNTKVITAQLNG--------VRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKG 112
NNT+VI A+L G V + RRE +I W +P K ++ G
Sbjct: 58 INNTRVIPARLIGEKEGTGGKVEILLLKRRENDI------------WESLVKPGKKLRPG 105
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
+ F G RL+A +++ G L+ F GI E + +G +PLPPYI K
Sbjct: 106 ARVTF----GDGRLKAEILEIAEEGNRLVKFYYEGI-FEEILDSLGEMPLPPYITHK--- 157
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D YQT YAK GS AAPTAGLHFT+ LL ++ G+++ +TLHVG GTF PVKV
Sbjct: 158 -LEDKEMYQTVYAKFDGSAAAPTAGLHFTNELLEKIRHKGVRIASITLHVGLGTFRPVKV 216
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
ED ++H MH+E ++ A +N K GGR++ VGTTS R +E+ E+G+++ +G
Sbjct: 217 EDVNNHHMHTEWYEVNKEAADIINETKKNGGRVICVGTTSCRTIESVADENGLMSAKTGE 276
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFI PGY+F+ +D L++NFHLP+STL+MLVSAF G E Y+ A+ YRF+S+GD
Sbjct: 277 TDIFIYPGYKFKVMDGLITNFHLPESTLVMLVSAFAGKERVLSAYETAVKEIYRFFSFGD 336
Query: 353 TSLL 356
+L
Sbjct: 337 AMIL 340
>gi|291459918|ref|ZP_06599308.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Oribacterium sp. oral taxon 078 str. F0262]
gi|291417259|gb|EFE90978.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Oribacterium sp. oral taxon 078 str. F0262]
Length = 341
Score = 258 bits (660), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 147/357 (41%), Positives = 205/357 (57%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M K+F F+LP +A P+ R S+RL+V+ + + H ++ + D +V
Sbjct: 1 MDTKDFYFELPKELVAQDPLEDRASSRLLVM--DRRSGRLTHRHFY-EITDYFRPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G R ++ L R + + W RP K +++G + F
Sbjct: 58 LNDTKVIPARLLGCR----EGGGAKVELLLLKRETKDEWECLVRPGKKLREGARVEF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L A ++ G ++ F GI E + +G +PLPPYI K +D Y
Sbjct: 111 -GGGILRAEILRTAEDGSRVVRFFYEGI-FEEVLDRLGEMPLPPYITHK----LQDRSRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
T YAK GS AAPTAGLH+T LL R+ +G+++ +TLHVG GTF PVK E ++H M
Sbjct: 165 NTVYAKHDGSAAAPTAGLHWTKPLLERVEEMGVEIARLTLHVGLGTFRPVKAERLEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I A+ +N KS+GGR++ GTTS R +E+A EDG I SG+T+IFI PG
Sbjct: 225 HSEYYRIPKSEAEKMNRCKSKGGRLICTGTTSCRSIESAAEEDGRIPARSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YRFRA+D L++NFHLP+STL+MLVSAF G E K Y A+ YRF+S+GD L+
Sbjct: 285 YRFRAMDGLITNFHLPESTLVMLVSAFAGREHILKAYAEAVRERYRFFSFGDAMLIL 341
>gi|71152934|sp|Q8CS92|QUEA_STAES RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|329724657|gb|EGG61163.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus epidermidis VCU144]
gi|329733752|gb|EGG70078.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus epidermidis VCU045]
gi|329737099|gb|EGG73353.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus epidermidis VCU028]
Length = 341
Score = 258 bits (660), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 149/357 (41%), Positives = 210/357 (58%), Gaps = 18/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHL-VSDLPAFLNSNDAI 59
M +++FD+ LP S IA P+ RD +RL+V LS HL D+ + D +
Sbjct: 1 MNIEDFDYHLPESLIAQTPLKNRDQSRLLV----LSKDTGELTHLHFRDVIHYFEPGDTL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V N+T+V+ A+L G++ ++ + ++ N W V +P+K IKKG L+F
Sbjct: 57 VLNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKKGHRLNF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G ++ A I++ G ++ GI L+ ++ +G +PLPPYI K +D D
Sbjct: 111 --GDGKIVAECIEELEQGGRIMRLHYEGI-LQERLDELGEMPLPPYI--KERLDDPDR-- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT +LL+++ G+ + F+TLHVG GTF PV VE+ DDH
Sbjct: 164 YQTVYAKESGSAAAPTAGLHFTDDLLNKIKQKGVHIAFITLHVGLGTFRPVSVENIDDHE 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE + TA LN K G R++SVGTTS R LET + SG+T+IFI P
Sbjct: 224 MHSEYYQMTQETADLLNKTKESGKRVISVGTTSTRTLETIRRDHPQFVATSGWTDIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
G+ F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD L+
Sbjct: 284 GFEFKAIDGLITNFHLPKSTLVMLVSAFSNKKYILNAYHKAVEMEYRFFSFGDAMLI 340
>gi|239616653|ref|YP_002939975.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Kosmotoga
olearia TBF 19.5.1]
gi|239505484|gb|ACR78971.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Kosmotoga
olearia TBF 19.5.1]
Length = 340
Score = 258 bits (660), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 151/358 (42%), Positives = 207/358 (57%), Gaps = 21/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD++LP IA PV PRD +RLMV+ + + + D +L D +V
Sbjct: 3 MKVSDFDYELPKELIAQEPVQPRDHSRLMVIRRDRENFEHTHFYRIID---YLEPGDLLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N++KVI A+L G + ++ L +V W RP IK+G++L F
Sbjct: 60 MNDSKVIPARLLGKKSTG-----AKVEIVLIEKVGSKQWKAIVRPGSKIKRGNVLLF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L+ V++ + +L F+ G +I +G +P+PPYI+ K P D Y
Sbjct: 112 ---EDLQCEVVEHCDDSTRILEFT--GSNPWEKIRRIGKLPIPPYIS-KYPDDPNLY--- 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GSVAAPTAGLHFT +LL +L GIK+ FVTLHVG GTF PVKVE+ +DH+M
Sbjct: 163 QTVYAKKDGSVAAPTAGLHFTDSLLKKLKEKGIKMAFVTLHVGLGTFRPVKVENVEDHVM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + T + + K G R+++VGTT +R LE A DG + SG T+IFI P
Sbjct: 223 HSEYYTLPEETVELIKETKRNGNRVIAVGTTVVRTLEAVAQKHDGKLVAESGRTDIFIYP 282
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+ +D L++NFHLPKSTLLMLV+AF G E+ K Y AI YRF+S+GD ++
Sbjct: 283 PYEFKVIDGLITNFHLPKSTLLMLVAAFTGREKILKAYNEAIKLRYRFFSFGDACFIY 340
>gi|282875935|ref|ZP_06284802.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus epidermidis SK135]
gi|281294960|gb|EFA87487.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus epidermidis SK135]
Length = 341
Score = 258 bits (660), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 149/357 (41%), Positives = 210/357 (58%), Gaps = 18/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHL-VSDLPAFLNSNDAI 59
M +++FD+ LP S IA P+ RD +RL+V LS HL D+ + D +
Sbjct: 1 MNIEDFDYHLPESLIAQTPLKNRDQSRLLV----LSKDTGELTHLHFRDVIYYFEPGDTL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V N+T+V+ A+L G++ ++ + ++ N W V +P+K IKKG L+F
Sbjct: 57 VLNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKKGHRLNF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G ++ A I++ G ++ GI L+ ++ +G +PLPPYI K +D D
Sbjct: 111 --GDGKIVAECIEELEQGGRIMRLHYEGI-LQERLDELGEMPLPPYI--KERLDDPDR-- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT +LL+++ G+ + F+TLHVG GTF PV VE+ DDH
Sbjct: 164 YQTVYAKESGSAAAPTAGLHFTDDLLNKIKQKGVHIAFITLHVGLGTFRPVSVENIDDHE 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE + TA LN K G R++SVGTTS R LET + SG+T+IFI P
Sbjct: 224 MHSEYYQMTQETADLLNKTKESGKRVISVGTTSTRTLETIRRDHPQFVATSGWTDIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
G+ F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD L+
Sbjct: 284 GFEFKAIDGLITNFHLPKSTLVMLVSAFSNKKYILNAYHKAVEMEYRFFSFGDAMLI 340
>gi|57867143|ref|YP_188779.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus epidermidis RP62A]
gi|71153095|sp|Q5HNR1|QUEA_STAEQ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|57637801|gb|AAW54589.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus epidermidis RP62A]
Length = 341
Score = 258 bits (660), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 149/357 (41%), Positives = 210/357 (58%), Gaps = 18/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHL-VSDLPAFLNSNDAI 59
M +++FD+ LP S IA P+ RD +RL+V LS HL D+ + D +
Sbjct: 1 MNIEDFDYHLPESLIAQTPLKNRDQSRLLV----LSKDTGELTHLHFRDVIHYFEPGDTL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V N+T+V+ A+L G++ ++ + ++ N W V +P+K IKKG L+F
Sbjct: 57 VLNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKKGHRLNF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G ++ A I++ G ++ GI L+ ++ +G +PLPPYI K +D D
Sbjct: 111 --GDGKIVAECIEELEQGGRIMRLHYEGI-LQERLDELGDMPLPPYI--KERLDDPDR-- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT +LL+++ G+ + F+TLHVG GTF PV VE+ DDH
Sbjct: 164 YQTVYAKESGSAAAPTAGLHFTDDLLNKIKQKGVHIAFITLHVGLGTFRPVSVENIDDHE 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE + TA LN K G R++SVGTTS R LET + SG+T+IFI P
Sbjct: 224 MHSEYYQMTQETADLLNKTKESGKRVISVGTTSTRTLETIRRDHPQFVATSGWTDIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
G+ F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD L+
Sbjct: 284 GFEFKAIDGLITNFHLPKSTLVMLVSAFSNKKYILNAYHKAVEMEYRFFSFGDAMLI 340
>gi|225569103|ref|ZP_03778128.1| hypothetical protein CLOHYLEM_05183 [Clostridium hylemonae DSM
15053]
gi|225161902|gb|EEG74521.1| hypothetical protein CLOHYLEM_05183 [Clostridium hylemonae DSM
15053]
Length = 341
Score = 258 bits (660), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 148/352 (42%), Positives = 198/352 (56%), Gaps = 16/352 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F ++LP IA P+ R S+RL+V+ ++S H+ D+ +L+ D +V
Sbjct: 1 MKRQDFYYELPEELIAQDPLEDRSSSRLLVLDKESG---LVSHHVFKDITDYLHRGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G R R I L R + W +P K K G + F
Sbjct: 58 INDTKVIPARLVGSRIGTDAR----IEVLLLKRKENDIWETLVKPGKKAKIGTKISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L VID G L+ FS GI E + +G +PLPPYI + D Y
Sbjct: 111 -GEGILTGEVIDVVEEGNRLIQFSYEGI-FEEILDRLGQMPLPPYITHQ----LEDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + G+ + VTLHVG GTF PVK +D +H M
Sbjct: 165 QTVYAKHSGSAAAPTAGLHFTPELLEEIQKKGVDIARVTLHVGLGTFRPVKADDILEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ID A +N K GG+++ VGTTS R +E+A + G I SG+T+IFI PG
Sbjct: 225 HSEFFQIDEAAAMKINKAKDTGGKVICVGTTSCRTIESAADKTGHITAKSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
Y F+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD
Sbjct: 285 YEFKLLDGLITNFHLPESTLIMLVSALAGREHVLAAYEEAVKERYRFFSFGD 336
>gi|313114158|ref|ZP_07799710.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Faecalibacterium cf. prausnitzii KLE1255]
gi|310623567|gb|EFQ06970.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Faecalibacterium cf. prausnitzii KLE1255]
Length = 342
Score = 258 bits (660), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 147/359 (40%), Positives = 201/359 (55%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+ K+F +DLP IA P PRDSARLMV+ I + DLP FL D +V
Sbjct: 1 MLKKDFWYDLPKELIAQEPADPRDSARLMVLSQKDDS---IQHKIFHDLPEFLEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHM--RVSPNSWSVYARPSKVIKKGDILHFF 118
NN+KV+ A++ GV+ + C L + +V + W A+P K ++ G + F
Sbjct: 58 VNNSKVLPARIVGVK------QPTGAVCELLLLRQVKGDQWECLAKPGKRMQPGTKVSF- 110
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
G L A V + G + F L ++ G +PLPPYI ++ D
Sbjct: 111 ---GDGSLTAVVDETMEDGNKYVTFYYDTETLYEKLDEFGKMPLPPYITKQ----LEDQS 163
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YAK GS AAPTAGLHFT L+ + + G+ + VTLHVG GTF PV+ ++ DH
Sbjct: 164 QYQTVYAKELGSAAAPTAGLHFTPELMDTIRAKGVNIAEVTLHVGLGTFRPVQEDEIADH 223
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE ID TAQ + K+ G R+++VGTTS R LE + G I SG T+IF+
Sbjct: 224 KMHSEWYCIDEKTAQMIRDTKAAGHRVIAVGTTSCRTLEAVAAKYGEIRACSGNTSIFLY 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG +F +D L++NFHLP+STL+MLVSA G E+T Y+ A+ YRF+S+GD L+
Sbjct: 284 PGVKFNCIDGLITNFHLPESTLIMLVSALYGYEKTMAAYKVAVEERYRFFSFGDAMLIL 342
>gi|294788018|ref|ZP_06753262.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Simonsiella
muelleri ATCC 29453]
gi|294484311|gb|EFG31994.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Simonsiella
muelleri ATCC 29453]
Length = 340
Score = 258 bits (660), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 211/356 (59%), Gaps = 19/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EFDF+LP IA P R S+RL+V PN I D SDL ++ + D ++
Sbjct: 1 MHLSEFDFELPEQLIAQNPPTVRGSSRLLVALPNQP----IEDKKFSDLINYIEAGDVLI 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + +I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKASG-----GKIEALIERVLDEHTALAHIRSSKSPKTGTELIF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DG+ + AT++++ GE+ + + + + G +PLPPYI R D D Y
Sbjct: 109 DGE--IHATMLER--VGELFKIHFSGSLNVYELLEQHGVLPLPPYIERAAGADDDDR--Y 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT +L L G++ VTLHVGAGTF PV+V++ +H M
Sbjct: 163 QTVYAKHQGAVAAPTAGLHFTDEILGSLKDKGVEFAEVTLHVGAGTFQPVRVDNIAEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I T + + ++RG +I SVGTTSLR +E+A G + SG T+IFITP
Sbjct: 223 HSEWFQIPDATVSTIQAAQARGNKIWSVGTTSLRAIESA-ARSGSLKAGSGDTDIFITPR 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ F+ +D L++NFHLPKSTLLMLVSAF G + +++YQHAI YRF+SYGD +L
Sbjct: 282 FEFQIIDRLITNFHLPKSTLLMLVSAFSGSLKIREIYQHAIEQEYRFFSYGDAMIL 337
>gi|78485678|ref|YP_391603.1| S-adenosylmethionine [Thiomicrospira crunogena XCL-2]
gi|91207331|sp|Q31FZ4|QUEA_THICR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|78363964|gb|ABB41929.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Thiomicrospira crunogena XCL-2]
Length = 351
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 147/366 (40%), Positives = 220/366 (60%), Gaps = 32/366 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F+F+LP + IA +P R +RL+V++ + S +SD D+ +++N ND ++
Sbjct: 1 MRRQDFNFELPEALIAQQPAKERTQSRLLVMNADGS----VSDCHFPDILSYVNENDCLI 56
Query: 61 FNNTKVITAQLNGVRFCH------INRREKEISCTLHMRVS--PNSWSVYARPSKVIKKG 112
FNNTKVI A+L G + I R E H+R S P S + K
Sbjct: 57 FNNTKVIPARLFGQKLTGGKVELLIERVLDERRVLTHIRSSNAPKSGA----------KL 106
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
I F + R A + + E ++ +EL I G +PLPPYI R+ +
Sbjct: 107 RIEEAFDAEVLGREGALFEVQLSKDE---APELTALEL---IEAHGHMPLPPYIEREDQL 160
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+ ++ YQT Y++ G+VAAPTAGLHF ++LL ++ + G FVTLHVGAGTF PV+V
Sbjct: 161 EDKER--YQTVYSEKPGAVAAPTAGLHFDNDLLDKIKAKGAAAGFVTLHVGAGTFKPVQV 218
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWS 290
+D +H+MHSE+ + T + + + +GGR+++VGTTS+R LE+A +E+G + P+
Sbjct: 219 DDISEHVMHSEVIEVLPETVELIKQTRQKGGRVIAVGTTSVRCLESAASFSENGELAPYQ 278
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G T+IFITPGY F+ VD+L++NFHLP+STL+MLVSA G + T + Y HA+ YRF+SY
Sbjct: 279 GETDIFITPGYDFKVVDVLLTNFHLPESTLIMLVSALAGYDRTMQAYAHAVEQKYRFFSY 338
Query: 351 GDTSLL 356
GD L+
Sbjct: 339 GDAMLV 344
>gi|116512383|ref|YP_809599.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Lactococcus
lactis subsp. cremoris SK11]
gi|116108037|gb|ABJ73177.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Lactococcus lactis subsp. cremoris SK11]
Length = 348
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 147/352 (41%), Positives = 206/352 (58%), Gaps = 17/352 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDFDLP IA P+ R +RL+++ P + D ++ L + DA+V N
Sbjct: 5 INDFDFDLPEELIAQTPLEKRSESRLLILDPKTEE---LEDRHFYNIIDELEAGDALVLN 61
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NT+V+ A+L+G R I L + N W A+P++ +K G+ + F G
Sbjct: 62 NTRVLPARLHGER----AETGGHIELLLLKDMGENRWETLAKPARKMKVGEEVVF----G 113
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
RL+A V++ G ++ F GI LE SL G +PLPPYI + D YQT
Sbjct: 114 DGRLKAVVVEILEHGGRIVEFKYDGIFLEILESL-GEMPLPPYIHEQ----LEDQERYQT 168
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
+AK GS AAPTAGLH+T LL ++ G+K+ +TLHVG GTF PV V++ D+H MHS
Sbjct: 169 VFAKENGSAAAPTAGLHYTPELLEKIADKGVKIVELTLHVGLGTFRPVSVDNVDEHHMHS 228
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + A L +VK+ G +I + GTTS+R LET ++ DG I SG+T+IFI PGY
Sbjct: 229 EFYRLTEEAAAQLRAVKASGHKIFASGTTSIRTLETIGSKFDGDIQADSGWTDIFIKPGY 288
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
++ VD +NFHLPKSTL+MLV+AF G + + YQHAI YRF+S+GD
Sbjct: 289 EWKVVDAFNTNFHLPKSTLVMLVAAFAGRDFVLEAYQHAIDEKYRFFSFGDA 340
>gi|225873355|ref|YP_002754814.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acidobacterium capsulatum ATCC 51196]
gi|254764259|sp|C1F7K8|QUEA_ACIC5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|225793693|gb|ACO33783.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acidobacterium capsulatum ATCC 51196]
Length = 353
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 150/363 (41%), Positives = 210/363 (57%), Gaps = 18/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V EFDF LP IA P+ R ++R++ + + D + +DLP FL D +V
Sbjct: 1 MLVSEFDFHLPEDLIAQEPLADRAASRMLALDRSTGA---WQDRMFADLPGFLRPGDLLV 57
Query: 61 FNNTKVITAQL----NGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
NNT+VI A+L G+R + ++ L ++S W RP + + G+ +H
Sbjct: 58 LNNTRVIPARLFGRRAGLRTQPGHEATGQVEVMLTEQISEWEWRALVRPGRKVPVGESIH 117
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARK-RPIDAR 175
F G L+A +I GE L F+ + + VG IPLPPYI R+ RP
Sbjct: 118 F----GNEGLQAEIIAHGEFGERTLRFTPIP-DFFHVLERVGHIPLPPYIHREDRP---E 169
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y + GSVAAPTAGLHFT +L++L +G++ ++TLHVG GTF PV+V+
Sbjct: 170 DRERYQTVYNQQPGSVAAPTAGLHFTPQMLAKLQELGVQTAYITLHVGLGTFQPVRVDKV 229
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE-TATTEDGI-INPWSGFT 293
+D +H E + TA A+N+ R+++VGTT++R LE AT DG + P +G T
Sbjct: 230 EDIRLHRERYTLSPETAAAVNAALHENRRVIAVGTTTVRTLEHCATVADGKPLVPHAGET 289
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFI+PGY+FR V L++NFHLP+STLLMLVSAF G E Y+HA+ YRF+SYGD
Sbjct: 290 EIFISPGYKFRIVQGLLTNFHLPQSTLLMLVSAFAGREAVLAAYRHAVEQRYRFFSYGDC 349
Query: 354 SLL 356
L
Sbjct: 350 MFL 352
>gi|186686064|ref|YP_001869260.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Nostoc
punctiforme PCC 73102]
gi|186468516|gb|ACC84317.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Nostoc
punctiforme PCC 73102]
Length = 401
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 157/388 (40%), Positives = 209/388 (53%), Gaps = 43/388 (11%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVH-PNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
V +D+ LPP IA P PRDS+RL+VV+ P S H+ DLPA L S D +V
Sbjct: 18 VAGYDYTLPPELIAQNPAVPRDSSRLLVVNSPTTGAETEASHHIFHDLPALLRSGDLLVM 77
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF---- 117
NNT+VI A+L G + +I L N W +P K K+G + F
Sbjct: 78 NNTRVIPARLYGHKTTG-----AKIQVLLLEERQYNCWLALVKPGKSFKQGTKIIFEAKQ 132
Query: 118 --------------------------FSQDGQSRLEATVID-KWNTGEILLVFSI-SGIE 149
FS +L ATV++ TG LL F + G
Sbjct: 133 RIGDSKEAEGRSAGGRGENSSPCSLDFSPVTSQQLTATVLETDAATGGRLLQFDVPEGKP 192
Query: 150 LERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLI 209
L + + + G +PLPPYI D + YQT YA+ G++AAPTAGLHFT LL +L
Sbjct: 193 LVQLLEVFGEVPLPPYITASSAADEQ----YQTVYAEQPGAIAAPTAGLHFTPQLLQKLR 248
Query: 210 SIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVG 269
I FVTLHVG GTF PV+VED H MH E + A T + + + K+ GGRI++VG
Sbjct: 249 DRNINQAFVTLHVGVGTFRPVEVEDVTTHQMHEEWIEVPAATVEQIRATKAAGGRIIAVG 308
Query: 270 TTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCG 329
TT++R LE A + G + + G T++FI PGY++R VD L++NFHLP+S+LLMLVSA G
Sbjct: 309 TTAVRALEGA-AKSGNLQAFCGKTDLFIYPGYQWRVVDGLITNFHLPRSSLLMLVSALIG 367
Query: 330 IEETKKMYQHAISHAYRFYSYGDTSLLF 357
E +Y AI+ YRFYS+GD L+
Sbjct: 368 RERLLNIYNEAIASKYRFYSFGDAMLIL 395
>gi|71908890|ref|YP_286477.1| queuosine biosynthesis protein [Dechloromonas aromatica RCB]
gi|91207420|sp|Q47AX4|QUEA_DECAR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|71848511|gb|AAZ48007.1| Queuosine biosynthesis protein [Dechloromonas aromatica RCB]
Length = 352
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 149/359 (41%), Positives = 198/359 (55%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ V +FDF LPP IA P R +RL+ V C + D +DLP L + D +V
Sbjct: 3 LTVDDFDFPLPPELIAQHPAAERRGSRLLHV-----CGEQLVDRRFADLPTLLKAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF--- 117
FN+T+VI A RF ++ L V R SK K G +
Sbjct: 58 FNDTRVIKA-----RFFGQKDTGGQVEIMLERIVDATHAICQVRASKAPKAGSTMRLADA 112
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
F+ R A G+ + + G +PLPPYI + P + D
Sbjct: 113 FTVKMTGRAGAD-------GDFFALELAEPGDFWELSERYGKLPLPPYI--EHPAEGTDE 163
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YA+ G+VAAPTAGLHF ++L+ L + GI F+TLHVGAGT+ P++VE D
Sbjct: 164 TRYQTVYAREPGAVAAPTAGLHFDEDMLATLQAQGINTAFLTLHVGAGTYRPMRVEKIAD 223
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MHSE I TA A+ + ++ GG++++VGTTSLR LE+A EDG + T+IFI
Sbjct: 224 HRMHSERFEIPPATADAITTTRAAGGQVIAVGTTSLRALESAGNEDGTVQVGGAETSIFI 283
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
TPGYRF+ VD L++NFHLPKSTLLMLVSAF G + + Y HA++ YRF+SYGD LL
Sbjct: 284 TPGYRFQVVDRLITNFHLPKSTLLMLVSAFAGYDHIRAAYAHAVAERYRFFSYGDAMLL 342
>gi|30249127|ref|NP_841197.1| queuosine biosynthesis protein [Nitrosomonas europaea ATCC 19718]
gi|46576993|sp|Q82VF1|QUEA_NITEU RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|30180446|emb|CAD85051.1| Queuosine biosynthesis protein [Nitrosomonas europaea ATCC 19718]
Length = 353
Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 148/357 (41%), Positives = 210/357 (58%), Gaps = 18/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ R +R++ V+ + + D +LP +L D IV
Sbjct: 10 MKTDDFDFHLPDELIAQFPLANRSDSRMLYVNGKHAD---LRDAAFRNLPDYLKRGDVIV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L+GV+ ++ + + + V R S + G L
Sbjct: 67 LNNTRVVKARLSGVKST-----GGKVEVMVERILDTHRARVLIRASHALVIGSTL-LLEN 120
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+++EA D + + + S+ IEL Q G PLPPYI R + D Y
Sbjct: 121 KITAQVEAREQDIYT---LCFMHSLPLIELLDQF---GHTPLPPYIGRNATVS--DENRY 172
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF +L L ++G+K+ +VTLHVGAGTF PV+V++ D H+M
Sbjct: 173 QTVFAQESGAVAAPTAGLHFDETMLQTLRTLGVKIIYVTLHVGAGTFQPVRVQNIDQHVM 232
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFITP 299
H+E I T +A+ KS GG +++VGTTSLR LE+ T DG + +G TN+FITP
Sbjct: 233 HTEPYHIPTETVEAIQMCKSAGGSVLAVGTTSLRALESCMLTNDGTLVAGAGETNLFITP 292
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
G+RFR VD L++NFHLP+STLLMLVSAF G+E + Y+HAI + YRF+SYGD L+
Sbjct: 293 GFRFRIVDRLLTNFHLPRSTLLMLVSAFAGMETIRHAYRHAIDNHYRFFSYGDAMLI 349
>gi|163816609|ref|ZP_02207972.1| hypothetical protein COPEUT_02799 [Coprococcus eutactus ATCC 27759]
gi|158447866|gb|EDP24861.1| hypothetical protein COPEUT_02799 [Coprococcus eutactus ATCC 27759]
Length = 355
Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 149/365 (40%), Positives = 205/365 (56%), Gaps = 21/365 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F +DLP IA P+ R +RLMV+ + I D+ +LN D +V
Sbjct: 2 MKLTDFYYDLPQELIAQDPLLKRSESRLMVLDRKDNT---IEHKHFYDVIDYLNPGDCLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L GV+ I L R +W +P K K G + F S+
Sbjct: 59 INDTRVLPARLMGVK----EDTGASIEVLLLKRKDDRTWETLVKPGKKCKVGARIVFGSE 114
Query: 121 DGQSRLEATVIDKWNTGEI---------LLVFSISGIELERQISLVGTIPLPPYIARKRP 171
+ E +I GE+ L+ F GI E + +G +PLPPYI K
Sbjct: 115 SNEPDPETGLIKGKLVGEVVGIVEEGNRLIRFEFDGI-FEEILDELGQMPLPPYITHK-- 171
Query: 172 IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK 231
D YQT YA+ GS AAPTAGLHFT+ LL ++ + GIK+ VTLHVG GTF PVK
Sbjct: 172 --LEDKNRYQTVYAEHDGSAAAPTAGLHFTTELLDQIKAKGIKIAHVTLHVGLGTFRPVK 229
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSG 291
E+ DH MHSE I+ A +N K+ GGR+VSVGTTS R LE+ + +DG ++ S
Sbjct: 230 EENILDHHMHSEFCIIEQDAADMINETKAAGGRVVSVGTTSTRTLESMSDDDGTVHAGSK 289
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
+T+IFI PGY+F+ +D L++NFHLP+STLLMLVSA E + Y+ A+ YRF+S+G
Sbjct: 290 WTDIFIYPGYKFKVIDALITNFHLPESTLLMLVSALYDREHILEAYKVAVEEKYRFFSFG 349
Query: 352 DTSLL 356
D L+
Sbjct: 350 DAMLI 354
>gi|145589968|ref|YP_001156565.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
gi|189038872|sp|A4SZT7|QUEA_POLSQ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|145048374|gb|ABP35001.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
Length = 348
Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 156/364 (42%), Positives = 206/364 (56%), Gaps = 32/364 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F+++LPP IA P+ R +RL+ V + + D D+ D +V
Sbjct: 1 MQLSDFNYELPPELIAQHPLANRTDSRLLEVRADGMNHAHLVDRQFKDILILAQPGDLLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHM---RVS--PNSWSVYARPSKVIKKGDIL 115
FN+TKVI A+L+G +KE + + R+S +W V R SKV K G +
Sbjct: 61 FNDTKVIPARLHG---------KKETGGNVELLIERISGEKQAW-VQIRASKVPKTGSTV 110
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILL---VFSISGIELERQISLVGTIPLPPYIARKRPI 172
H ++Q G++ + E+L VFS+ LER G +PLPPYI +
Sbjct: 111 HIYNQSGETFSVEMIGYDGRFYEVLFPDHVFSL----LER----FGKLPLPPYIEHQP-- 160
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D D YQT AK G+VAAPTAGLHF +L +L +G+ VTLHVGAGTF PV+
Sbjct: 161 DGEDAQRYQTVVAKNPGAVAAPTAGLHFDEVILQKLKDVGVNQATVTLHVGAGTFTPVRE 220
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
ED H MH E I T QA+ K GGRI++VGTTSLR LE+ SG
Sbjct: 221 EDLSKHQMHYEWFSIPKETLQAIEKTKKNGGRIIAVGTTSLRALESQANS----QQSSGE 276
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
TN+FITPGY+F+ VD L++NFHLPKSTLLMLVSAF G++ + YQHAI+ YRF+SYGD
Sbjct: 277 TNLFITPGYQFKVVDCLLTNFHLPKSTLLMLVSAFAGVDNIRSAYQHAINQQYRFFSYGD 336
Query: 353 TSLL 356
L
Sbjct: 337 AMFL 340
>gi|258545497|ref|ZP_05705731.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Cardiobacterium hominis ATCC 15826]
gi|258519197|gb|EEV88056.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Cardiobacterium hominis ATCC 15826]
Length = 345
Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 148/353 (41%), Positives = 207/353 (58%), Gaps = 20/353 (5%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+F ++LP IA P+ R +ARL++ + ++D +V DLP L +D +VFNNT
Sbjct: 6 DFMYELPDELIARFPLAERSAARLLLARAVSVDEVALADRMVRDLPDLLEPDDLLVFNNT 65
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQS 124
+V+ A+L G + + L S + + Y R SK K G ++ G +
Sbjct: 66 RVLPARLFGQK-----ESGGRVEILLERLKSAHEANAYVRASKSPKVGGVIRI----GSA 116
Query: 125 RLEATVIDKWNTGEILLVFSI-SGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTT 183
L T G +F++ S ++ G +P+PPY+ +R D YQT
Sbjct: 117 ELRVT-------GRHEALFALYSETPWAELLAAQGEMPIPPYL--ERAALESDKQRYQTV 167
Query: 184 YAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSE 243
+AK G+VAAPTAGLHF LL+ + G+K+ VTLHVGAGTF PV+ E+ +HIMH E
Sbjct: 168 FAKHSGAVAAPTAGLHFDEALLAAIRLRGVKMAEVTLHVGAGTFQPVRHENLAEHIMHEE 227
Query: 244 IGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRF 303
+ A+ + ++RGGR+V++GTTSLR LE+A E G + P+SG TN+FITPGYRF
Sbjct: 228 WLQVGQDVVDAVAACRARGGRVVAIGTTSLRALESA-AEGGELAPFSGDTNLFITPGYRF 286
Query: 304 RAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
R VD L++NFHLP+STLLMLVSAF G + YQHAI+ YRF+SYGD L
Sbjct: 287 RVVDALLTNFHLPESTLLMLVSAFAGYANIRAAYQHAIAARYRFFSYGDAMFL 339
>gi|299532847|ref|ZP_07046234.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Comamonas
testosteroni S44]
gi|298719071|gb|EFI60041.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Comamonas
testosteroni S44]
Length = 362
Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 154/367 (41%), Positives = 211/367 (57%), Gaps = 23/367 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDFDLP S IA P R ++RL+ S P +D + +LP L D +VFN
Sbjct: 10 LSDFDFDLPESLIAQHPTAVRSASRLL---DGRSLP--ATDRIFRELPDLLQPGDLLVFN 64
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKVI A++ G + +I + + N + R SK G +H
Sbjct: 65 DTKVIKARVFGEKAS-----GGKIELLVERVLQNNEIVAHMRVSKKPLPGAKIHLCGGLK 119
Query: 123 QSRLEATVIDKW-NTGEILLVFSISGIELERQISLV---GTIPLPPYIARKR-----PID 173
EAT++ +W + L S G + E L+ G +PLPPYI R++ P +
Sbjct: 120 NGGFEATLLGRWPDENGPLFHLSFKGNQGESPYELLEQFGHLPLPPYIERQQNAEHDPDE 179
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT +A G+VAAPTA LHF +L+ L + G++ VTLHVGAGTF PVK E
Sbjct: 180 KEDSERYQTVFAAHPGAVAAPTAALHFDETVLAALQAKGVERASVTLHVGAGTFQPVKTE 239
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
+ DH MHSE I PT A+ + RGGRI++VGTT++R LE+ I SG T
Sbjct: 240 NLADHTMHSEWYDIPLPTLAAMERCRQRGGRIIAVGTTTVRTLESWAKYGNI----SGDT 295
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFITPG++++ VD+L++NFHLPKSTL+MLVSAF G E MYQHAI+ YRF+SYGD+
Sbjct: 296 SIFITPGFQYQVVDMLITNFHLPKSTLMMLVSAFAGYEHIMGMYQHAIAQHYRFFSYGDS 355
Query: 354 SLLFQKR 360
LL ++R
Sbjct: 356 MLLERRR 362
>gi|264680590|ref|YP_003280500.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Comamonas
testosteroni CNB-2]
gi|262211106|gb|ACY35204.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Comamonas
testosteroni CNB-2]
Length = 362
Score = 257 bits (657), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 155/367 (42%), Positives = 210/367 (57%), Gaps = 23/367 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDFDLP S IA P R ++RL+ S P +D + +LP L D +VFN
Sbjct: 10 LSDFDFDLPESLIAQHPTAVRSASRLL---DGRSLP--PTDRIFRELPDLLQPGDLLVFN 64
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKVI A++ G + +I + + N + R SK G +H
Sbjct: 65 DTKVIKARVFGEKAS-----GGKIELLVERVLQNNEVVAHMRVSKKPLPGAKIHLCGGLK 119
Query: 123 QSRLEATVIDKWNTGE-ILLVFSISGIELERQISLV---GTIPLPPYIARKR-----PID 173
EAT++ +W G L S G + E L+ G +PLPPYI R++ P +
Sbjct: 120 NGGFEATLLGRWPDGNGPLFHLSFKGNQGESPYELLEQFGHLPLPPYIERQQNAEHDPDE 179
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT +A G+VAAPTA LHF +L+ L + G++ VTLHVGAGTF PVK E
Sbjct: 180 KEDSERYQTVFAAHPGAVAAPTAALHFDETVLAALQAKGVERASVTLHVGAGTFQPVKTE 239
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
DH MHSE I PT A+ + RGGRI++VGTT++R LE+ I SG T
Sbjct: 240 KLADHTMHSEWYDIPLPTLAAMERCRQRGGRIIAVGTTTVRTLESWAKYGNI----SGDT 295
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFITPG++++ VD+L++NFHLPKSTL+MLVSAF G E MYQHAI+ YRF+SYGD+
Sbjct: 296 SIFITPGFQYQVVDMLITNFHLPKSTLMMLVSAFAGYEHIMGMYQHAIAQHYRFFSYGDS 355
Query: 354 SLLFQKR 360
LL ++R
Sbjct: 356 MLLERRR 362
>gi|319400966|gb|EFV89185.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus epidermidis FRI909]
Length = 341
Score = 257 bits (657), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 146/357 (40%), Positives = 210/357 (58%), Gaps = 18/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHL-VSDLPAFLNSNDAI 59
M +++FD+ LP S IA P+ RD +RL+V+ + HL D+ + D +
Sbjct: 1 MNIEDFDYHLPESLIAQTPLKNRDQSRLLVLRKDTGE----MTHLHFRDVIHYFEPGDTL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V N+T+V+ A+L G++ ++ + ++ N W V +P+K IKKG L+F
Sbjct: 57 VLNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKKGHHLNF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G ++ A I++ G ++ GI L+ ++ +G +PLPPYI K +D D
Sbjct: 111 --GDGKIVAECIEELKQGGRIMRLHYEGI-LQERLDELGEMPLPPYI--KERLDDPDR-- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GS AAPTAGLHFT +LL+++ G+ + F+TLHVG GTF PV V++ DDH
Sbjct: 164 YQTVYAKESGSAAAPTAGLHFTDDLLNKIEQKGVHIAFITLHVGLGTFRPVSVDNIDDHE 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE + TA LN K G R++SVGTTS R LET + SG+T+IFI P
Sbjct: 224 MHSEYYQMTQKTADLLNQTKENGKRVISVGTTSTRTLETIRRDHPQFVATSGWTDIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
G+ F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD L+
Sbjct: 284 GFEFKAIDGLITNFHLPKSTLVMLVSAFSSKKYILNAYHKAVEMEYRFFSFGDAMLI 340
>gi|325919632|ref|ZP_08181641.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
gardneri ATCC 19865]
gi|325549880|gb|EGD20725.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
gardneri ATCC 19865]
Length = 356
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 151/372 (40%), Positives = 212/372 (56%), Gaps = 38/372 (10%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R ++RL+VV P+ P + D V DLP L D ++
Sbjct: 1 MKKSDFHYDLPDELIAQAPLAERAASRLLVVPPS---PQALVDRQVRDLPELLQPGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCH------INR--REKEISCTLHMRVSPNSWSVYARPSKVIKKG 112
FN+T+VI A+L G + I R E+E + SP + S+ A + G
Sbjct: 58 FNDTRVIPARLFGQKASGGRVEILIERLLGEREARVQIGASKSPKAGSLIA-----LDAG 112
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
+DG+ LL F I LE+ + G +PLPPYI R+ +
Sbjct: 113 GQAEVLGRDGEF--------------YLLRFDIP-TTLEQWLPEAGQLPLPPYIRREPGV 157
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+ R+ YQT +A+ G+VAAPTAGLHF LL++L G++ VTLHVGAGTF PV+V
Sbjct: 158 EDRER--YQTVFAREVGAVAAPTAGLHFDEALLAQLRERGVEFGHVTLHVGAGTFQPVRV 215
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-----TTEDGIIN 287
+ D H+MH E + A + + ++RGGR+++VGTT +R LE+A DG +
Sbjct: 216 DALDQHVMHKEWLNVGAALVEQVRRTRARGGRVIAVGTTVVRSLESAWRKTDAAPDGELL 275
Query: 288 PWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
P++G T IFI PGYR R+VD +++NFHLP+STLLM+VSAF G E YQHAI+ YRF
Sbjct: 276 PFAGETQIFILPGYRIRSVDAMVTNFHLPESTLLMMVSAFAGRERIFAAYQHAIAQRYRF 335
Query: 348 YSYGDTSLLFQK 359
+SYGD LL+ +
Sbjct: 336 FSYGDAMLLWGR 347
>gi|227499579|ref|ZP_03929686.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Anaerococcus tetradius ATCC 35098]
gi|227218338|gb|EEI83592.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Anaerococcus tetradius ATCC 35098]
Length = 340
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 146/356 (41%), Positives = 200/356 (56%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++FD+ LP IA P RD AR+MV+ I D D+ +LN D +V
Sbjct: 1 MKTEDFDYYLPEKLIAQHPSDKRDGARMMVLDKKNGA---IEDKYFYDIIDYLNPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L F H +E+ I L + W V RP K +K G + F
Sbjct: 58 MNDTRVIPARL----FGHRKDKEESIEVFLLHNIEGKVWEVLVRPGKKMKIGAEVIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L VID G ++ F+ GI + +G +PLPPYI K +D +Y
Sbjct: 111 --SEELSCKVIDIKEDGNRIVEFTYDGI-FNEILDKLGNVPLPPYIKEK----LKDPEEY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GSVAAPTAGLHFT LL R+ G+K+ F+TL+VG GTF PV ED DH M
Sbjct: 164 QTVYSKNPGSVAAPTAGLHFTKELLKRIEDKGVKLAFLTLNVGLGTFRPVNEEDITDHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA +N + G +I++VGTTS+R LE+ + G I SG+T+IFI PG
Sbjct: 224 HSEFYTLSKETASIINEGRKNGNKIIAVGTTSIRTLESVFKKCGEIREDSGWTDIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ ++ VD +++NFHLPKSTL+MLV+AF E Y +A+ YRF+S+GD +
Sbjct: 284 FEYKVVDSVITNFHLPKSTLIMLVAAFTSREIILNAYNYAVKEEYRFFSFGDCMFI 339
>gi|319936566|ref|ZP_08010980.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Coprobacillus sp. 29_1]
gi|319808364|gb|EFW04924.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Coprobacillus sp. 29_1]
Length = 341
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 150/352 (42%), Positives = 198/352 (56%), Gaps = 16/352 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EFD+ LP IA P+ RD++RLMV+ I D D+ +L D +V
Sbjct: 1 MKLSEFDYHLPEELIAQTPLKKRDTSRLMVLDRKNET---IEDKHFYDILDYLYEGDILV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L G + + L + + W ++++K I+ F
Sbjct: 58 RNNTKVIPARLYGTK----EETNGHVEVLLLKDLGNDVWECLVGNARIVKIDTIITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A I + G GI E + +GT+PLPPYI K R Y
Sbjct: 111 -GDGSLKAKCIHIGDEGIRHFEMIYEGIFYEI-LDTLGTMPLPPYIKEKLEDQER----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAKI+GS AAPTAGLHFT +++ ++ + G+K+ VTLHVG GTF PVKV+D +H M
Sbjct: 165 QTVYAKIEGSAAAPTAGLHFTDDIIDKVKAKGVKILDVTLHVGLGTFRPVKVDDVLEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ID AQ LN+ K+ G RI+SVGTTS R LE + G T+IFI PG
Sbjct: 225 HSEFYMIDEDVAQQLNNAKANGQRIISVGTTSTRTLEANFKKYGQFKATQESTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
Y+F A+D L++NFHLPKSTL+MLVSAF E K Y HA+ YRF+S+GD
Sbjct: 285 YQFEAIDALITNFHLPKSTLVMLVSAFANKEFILKAYHHAVEEKYRFFSFGD 336
>gi|251811045|ref|ZP_04825518.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus epidermidis BCM-HMP0060]
gi|251805421|gb|EES58078.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus epidermidis BCM-HMP0060]
Length = 354
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 148/355 (41%), Positives = 209/355 (58%), Gaps = 18/355 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHL-VSDLPAFLNSNDAIVF 61
+++FD+ LP S IA P+ RD +RL+V LS HL D+ + D +V
Sbjct: 16 IEDFDYHLPESLIAQTPLKNRDQSRLLV----LSKDTGELTHLHFRDVIYYFEPGDTLVL 71
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L G++ ++ + ++ N W V +P+K IKKG L+F
Sbjct: 72 NDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKKGHRLNF---- 123
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G ++ A I++ G ++ GI L+ ++ +G +PLPPYI K +D D YQ
Sbjct: 124 GDGKIVAECIEELEQGGRIMRLHYEGI-LQERLDELGEMPLPPYI--KERLDDPDR--YQ 178
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YAK GS AAPTAGLHFT +LL+++ G+ + F+TLHVG GTF PV VE+ DDH MH
Sbjct: 179 TVYAKESGSAAAPTAGLHFTDDLLNKIKQKGVHIAFITLHVGLGTFRPVSVENIDDHEMH 238
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
SE + TA LN K G R++SVGTTS R LET + SG+T+IFI PG+
Sbjct: 239 SEYYQMTQETADLLNKTKESGKRVISVGTTSTRTLETIRRDHPQFVATSGWTDIFIYPGF 298
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD L+
Sbjct: 299 EFKAIDGLITNFHLPKSTLVMLVSAFSNKKYILNAYHKAVEMEYRFFSFGDAMLI 353
>gi|320450465|ref|YP_004202561.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Thermus
scotoductus SA-01]
gi|320150634|gb|ADW22012.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Thermus
scotoductus SA-01]
Length = 344
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 155/360 (43%), Positives = 203/360 (56%), Gaps = 19/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++ +D+ LP IA V PRD AR++VVH P V DLP +L+ D +V
Sbjct: 1 MSLEAYDYFLPQELIAQEGVEPRDRARMLVVH--RKGPFRAEHRQVRDLPEYLHPGDVLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS- 119
FN +KVI A+L R + L +P W P + K G L F S
Sbjct: 59 FNESKVIPARLLAQRPMG-----GRVEVLLVRERAPGLWEALVGPGRKAKPGTRLRFLSP 113
Query: 120 QDGQ--SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+D + LEA V+ G LL F +L + VG +PLPPYI K P +
Sbjct: 114 RDLRVVPDLEAEVVGVEEDGVRLLRFQG---DLMAHLEEVGEVPLPPYIKAKIPPE---- 166
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YA+ GSVAAPTAGLHFT LL+RL +G+++ F+TLHVG GTF PVK D +
Sbjct: 167 -RYQTVYARRPGSVAAPTAGLHFTPELLARLRGMGVELRFLTLHVGPGTFRPVK-GDPEK 224
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH E I TA+A+N K G R+V+VGTT +R LE+A E + P G T +FI
Sbjct: 225 HEMHPEPYEIPEETAEAINRAKKEGRRVVAVGTTVVRALESAFREGIGVVPGMGETRLFI 284
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
P Y F+ +D L +NFHLP+STLLMLV+AF G E+T + Y+ A++ YRFYS GD L+
Sbjct: 285 RPPYAFQVIDALFTNFHLPRSTLLMLVAAFLGYEKTMEAYRLAVAERYRFYSLGDAMLIL 344
>gi|27468241|ref|NP_764878.1| S-adenosylmethionine tRNA ribosyltransferase [Staphylococcus
epidermidis ATCC 12228]
gi|293366403|ref|ZP_06613082.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus epidermidis M23864:W2(grey)]
gi|27315787|gb|AAO04922.1|AE016748_156 S-adenosylmethionine tRNA ribosyltransferase [Staphylococcus
epidermidis ATCC 12228]
gi|291319528|gb|EFE59895.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus epidermidis M23864:W2(grey)]
Length = 354
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 148/355 (41%), Positives = 209/355 (58%), Gaps = 18/355 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHL-VSDLPAFLNSNDAIVF 61
+++FD+ LP S IA P+ RD +RL+V LS HL D+ + D +V
Sbjct: 16 IEDFDYHLPESLIAQTPLKNRDQSRLLV----LSKDTGELTHLHFRDVIHYFEPGDTLVL 71
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L G++ ++ + ++ N W V +P+K IKKG L+F
Sbjct: 72 NDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKKGHRLNF---- 123
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G ++ A I++ G ++ GI L+ ++ +G +PLPPYI K +D D YQ
Sbjct: 124 GDGKIVAECIEELEQGGRIMRLHYEGI-LQERLDELGEMPLPPYI--KERLDDPDR--YQ 178
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YAK GS AAPTAGLHFT +LL+++ G+ + F+TLHVG GTF PV VE+ DDH MH
Sbjct: 179 TVYAKESGSAAAPTAGLHFTDDLLNKIKQKGVHIAFITLHVGLGTFRPVSVENIDDHEMH 238
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
SE + TA LN K G R++SVGTTS R LET + SG+T+IFI PG+
Sbjct: 239 SEYYQMTQETADLLNKTKESGKRVISVGTTSTRTLETIRRDHPQFVATSGWTDIFIYPGF 298
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD L+
Sbjct: 299 EFKAIDGLITNFHLPKSTLVMLVSAFSNKKYILNAYHKAVEMEYRFFSFGDAMLI 353
>gi|317132377|ref|YP_004091691.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Ethanoligenens harbinense YUAN-3]
gi|315470356|gb|ADU26960.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Ethanoligenens harbinense YUAN-3]
Length = 341
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 147/357 (41%), Positives = 200/357 (56%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLPP RIA P+ RD +RLM + + + V H DLP L D ++
Sbjct: 1 MKKSDFYYDLPPERIAQEPLAQRDQSRLMTL--DRATGAVGHRHFY-DLPDLLLPGDCLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN++V+ A+L G R + + L + W V RP + + G F
Sbjct: 58 LNNSRVLPARLYGNR----EKTGGRVEFVLLNEKKRDEWEVILRPGRTARVGARYVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A V++ G ++ F G + R I +G +PLP YI + +D Y
Sbjct: 111 -GGGLLKAEVLEIIEDGNRIVRFEHEG-DFYRLIEQIGEMPLPHYITHR----LKDKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL L G+++ +VTLHVG GTF PVK + + H+M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTPELLEHLRQKGVRIGYVTLHVGLGTFRPVKADTIEKHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA + K+ GGR+V VGTTS R LE+ G I G+T+IFI PG
Sbjct: 225 HSEHYELPEETAALIRETKASGGRVVGVGTTSCRTLESVAQRYGEIRAAEGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
++F+ +D L++NFHLP+STL+MLVSAF G E YQ AI+ YRFYS+GD LL+
Sbjct: 285 FQFQVLDALITNFHLPESTLIMLVSAFAGREHVLHAYQEAIAEQYRFYSFGDAMLLY 341
>gi|331091476|ref|ZP_08340314.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lachnospiraceae bacterium 2_1_46FAA]
gi|330404032|gb|EGG83582.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lachnospiraceae bacterium 2_1_46FAA]
Length = 341
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 143/356 (40%), Positives = 200/356 (56%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F F+LP IA P+ R +RL+V+ H+ ++ +L D +V
Sbjct: 1 MKREDFYFELPEELIAQDPLEDRSGSRLLVLDKETG---KTEHHIFKEIVNYLEEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G + + +I L R + W +P K K G + F
Sbjct: 58 INDTKVLPARLIGSKVG----TDAKIEVLLLKRRENDVWETLVKPGKKAKVGTKIRF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ LE VID + G L+ F GI E + +G +PLPPYI + D Y
Sbjct: 111 -GEGLLEGEVIDIVDEGNRLIQFHYEGI-FEEVLDQLGQMPLPPYITHQ----LEDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + +K+ VTLHVG GTF PVKV++ +H M
Sbjct: 165 QTVYAKHTGSAAAPTAGLHFTEELLEEIAKKNVKIARVTLHVGLGTFRPVKVDNILEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ID A+ +N K +G R++ VGTTS R +E+A E+G + SG+T+IFI PG
Sbjct: 225 HSEFYQIDEEAARKINETKEQGHRVICVGTTSCRTVESAADENGRLQATSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YQFKILDCLITNFHLPESTLIMLVSALAGRENVLAAYEEAVRERYRFFSFGDAMFI 340
>gi|161869357|ref|YP_001598524.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis 053442]
gi|189038528|sp|A9M1H2|QUEA_NEIM0 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|161594910|gb|ABX72570.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis 053442]
Length = 346
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 209/356 (58%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P++ + D + DLP ++ + D +V
Sbjct: 1 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPDMP----LQDRVFGDLPDYVEAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDSG-----GRIEALIERVLDSHTALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 109 --EGGIRAVMVGR--EGELFCLRFEGGETVYELLEQNGHLPLPPYI--ERAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + TA A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 223 HSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF VD L++NFHLPKSTLLMLVSAF G+ + Y+HA+ YRF+SYGD +L
Sbjct: 283 YRFNVVDRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRHAVEREYRFFSYGDAMVL 338
>gi|261418396|ref|YP_003252078.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Geobacillus
sp. Y412MC61]
gi|319767645|ref|YP_004133146.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Geobacillus
sp. Y412MC52]
gi|261374853|gb|ACX77596.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Geobacillus
sp. Y412MC61]
gi|317112511|gb|ADU95003.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Geobacillus
sp. Y412MC52]
Length = 342
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 151/362 (41%), Positives = 206/362 (56%), Gaps = 27/362 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF LP IA P+ R ++RLMV+ I ++ ++LN D +V
Sbjct: 1 MKVDLFDFHLPEELIAQTPLPDRAASRLMVLDKRTGA---IRHETFRNIISYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKE-----ISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
N+T+V+ A+L G EKE + L ++ + W +P K +K G L
Sbjct: 58 LNDTRVMPARLYG---------EKEETGGTVEVLLLKQLDGDRWETLVKPGKRVKPGTKL 108
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
F G +LEA +D G +L FS G+ E ++ +G +PLPPYI K R
Sbjct: 109 TF----GGGKLEAVCLDTLEHGGRVLEFSYDGLFYE-VLAELGEMPLPPYIKEKLDDPER 163
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
YQT YA+ GS AAPTAGLHFT LL + G+ + F+TLHVG GTF PV+V++
Sbjct: 164 ----YQTVYAREIGSAAAPTAGLHFTEELLDAIREKGVHIVFITLHVGLGTFRPVQVDEV 219
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTN 294
+ H MH+E + TA+ LN V+ +GGRI++VGTTS R LET A +G SG+T+
Sbjct: 220 EKHDMHAEFYQMSEETAETLNRVREQGGRIIAVGTTSTRTLETIAGKHNGRFVAESGWTD 279
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PGY F+ +D L++NFHLPKSTL+MLVSA G E YQ A+ YRF+S+GD
Sbjct: 280 IFIYPGYEFKGIDGLVTNFHLPKSTLIMLVSALAGRENILHAYQVAVKERYRFFSFGDAM 339
Query: 355 LL 356
L+
Sbjct: 340 LI 341
>gi|158520100|ref|YP_001527970.1| queuosine biosynthesis protein [Desulfococcus oleovorans Hxd3]
gi|158508926|gb|ABW65893.1| Queuosine biosynthesis protein [Desulfococcus oleovorans Hxd3]
Length = 349
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 162/369 (43%), Positives = 212/369 (57%), Gaps = 37/369 (10%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+V ++D+DLPP RIA +PV RDS+RL+ + IS H DLP L +D +V
Sbjct: 3 LVSDYDYDLPPDRIAQQPVTQRDSSRLLRLDRARGG---ISHHRFYDLPDLLRPSDLLVV 59
Query: 62 NNTKVITAQLNGVRFCHIN-----------RREKEISCTLHMRVSPNSWSVYARPSKVIK 110
NNT+V+ A+L G++ R EK + C ++ S RP
Sbjct: 60 NNTRVVPARLEGIKETGGRAGALILDYPGVRTEKGVICRCMVKASGR-----LRPGT--- 111
Query: 111 KGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKR 170
F +D RL A+V+D + G L FS G + ++ + VG PLPPYI R R
Sbjct: 112 -----RFLFED---RLSASVVDAAD-GLYTLCFSCDG-DFDQTLFAVGRTPLPPYITRNR 161
Query: 171 ---PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
P D D YQT YA G+VAAPTAGLHFT N+L RL + GI VTLHVG GTF
Sbjct: 162 DGAPCD--DRTCYQTVYADRDGAVAAPTAGLHFTPNVLDRLAAKGISTAPVTLHVGHGTF 219
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN 287
+PV+V D DH MHSE + A TA A+N+ + GGR+V+VGTT +R LE G I
Sbjct: 220 LPVRVSDIRDHAMHSERFEVPAATAAAINATRRDGGRVVAVGTTVVRTLEYVARTCGEIR 279
Query: 288 PWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
+SG ++FI PGY F+A+ +++NFHLP+STLLMLVSAF G E+ Y+ AI YRF
Sbjct: 280 AFSGACDLFIYPGYNFQAIAAMITNFHLPRSTLLMLVSAFTGREKVLAAYEAAIQEKYRF 339
Query: 348 YSYGDTSLL 356
YSYGD L+
Sbjct: 340 YSYGDAMLI 348
>gi|300690474|ref|YP_003751469.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ralstonia
solanacearum PSI07]
gi|299077534|emb|CBJ50160.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ralstonia
solanacearum PSI07]
Length = 350
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 152/356 (42%), Positives = 205/356 (57%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FDFDLPP IA + R ++RL+ V + P D +DL +L D ++
Sbjct: 2 LTLSDFDFDLPPELIAQTALPDRTASRLLAVRRDAQGPH-FDDRQFADLVDYLRPGDLLI 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A RF +I + + + R SK G L
Sbjct: 61 FNDTRVIKA-----RFFGHKASGGKIEVLVERLLDEYTVLAQIRSSKSPVAGSTLRL--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ TV + L F +EL I G +PLPPYI + D+ D Y
Sbjct: 113 --ADAFDVTVGPRHEPF-FTLRFPQPALEL---IEQYGRLPLPPYI--EHTPDSFDETRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF L +RL ++G++ F+TLHVGAGTF PV+VE+ +H M
Sbjct: 165 QTVYARNPGAVAAPTAGLHFDDALFARLDAMGVRRGFLTLHVGAGTFSPVRVENIAEHRM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I A+A+ + ++ GGRI++VGTTS+R LE+A DG + SG T+IFITPG
Sbjct: 225 HSEWYAISPALAEAIRATRAAGGRIIAVGTTSMRALESAARPDGTLAAGSGETDIFITPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI+ YRF+SYGD L
Sbjct: 285 YRFRLVDALVTNFHLPKSTLLMLVSAFAGLETIRAAYRHAIAQRYRFFSYGDAMFL 340
>gi|294664106|ref|ZP_06729501.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 10535]
gi|292606127|gb|EFF49383.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 10535]
Length = 356
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 157/365 (43%), Positives = 219/365 (60%), Gaps = 24/365 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R ++RL+VV P+ P ++D V DLP L D ++
Sbjct: 1 MKKSDFHYDLPDELIAQAPLAERAASRLLVVPPS---PQALADRQVRDLPELLQPGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + R E I L R + V SK K G ++
Sbjct: 58 FNDTRVIPARLFGHK-ASGGRVEILIERLLGERQA----RVQIGASKSPKAGSLIAL-DA 111
Query: 121 DGQSRLEATVIDKWNTGEI-LLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
GQ A V+ + GE LL F I LE + G +PLPPYI R+ ++ R+
Sbjct: 112 GGQ----AEVLGR--DGEFYLLRFEIP-TPLEHWLLEAGRLPLPPYIRREPGVEDRER-- 162
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A+ G+VAAPTAGLHF LL+RL G++ VTLHVGAGTF PV+V+ D H+
Sbjct: 163 YQTVFAREVGAVAAPTAGLHFDEPLLARLRERGVEFGHVTLHVGAGTFQPVRVDKLDQHV 222
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTE---DGIINPWSGFTN 294
MH+E + A + + ++RGGR+++VGTT +R LE+A TTE +G + P++G T
Sbjct: 223 MHTEWLNVGAALVEQVRRTRARGGRVIAVGTTVVRSLESAWRTTEAAPEGELQPFAGETQ 282
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PGYR R+VD +++NFHLP+STL+M+VSAF G E Y+HAI+ YRF+SYGD
Sbjct: 283 IFILPGYRIRSVDAMVTNFHLPESTLMMMVSAFAGRERIFAAYRHAIAQRYRFFSYGDAM 342
Query: 355 LLFQK 359
LL+ +
Sbjct: 343 LLWGR 347
>gi|300172986|ref|YP_003772152.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Leuconostoc
gasicomitatum LMG 18811]
gi|299887365|emb|CBL91333.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Leuconostoc
gasicomitatum LMG 18811]
Length = 353
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 147/360 (40%), Positives = 214/360 (59%), Gaps = 15/360 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FD+DLP + IA P+ RDS+RL+V+ + + D D+ ++N DAIV
Sbjct: 8 QLADFDYDLPETLIAQTPLKQRDSSRLLVLDADTG---LYEDKHFYDILDYVNPGDAIVM 64
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NN++V+ A+L+GVR E + H V W +P+K G + F +
Sbjct: 65 NNSRVLPARLHGVRPETGGHAEVLLLRQDHGDV----WETLVKPAKKSPVGSTIFFGNDI 120
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ ATV+ + G + F GI +E + +G +PLPPYI K R YQ
Sbjct: 121 DNPVMTATVVGELEHGGRYIEFHYEGIFMEL-LEKLGEMPLPPYIKEKLADQER----YQ 175
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T Y+K+ GS AAPTAGLH+T LL ++ + G++ +TLHVG GTF PV+ E+ +DH MH
Sbjct: 176 TVYSKVDGSAAAPTAGLHWTPELLDKVRAKGVQTIELTLHVGLGTFRPVEEENIEDHKMH 235
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPG 300
SE + + A ALN V + GGRI++ GTTS+R LET ++ +G + SG+T+IFI PG
Sbjct: 236 SEFYQLSSEAADALNKVHATGGRIIATGTTSIRTLETIGSKFNGQLQADSGWTDIFIKPG 295
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
Y++ VD ++NFHLPKSTL+MLV+AF G + YQHA++ YRF+S+GD +F KR
Sbjct: 296 YQWTTVDAFITNFHLPKSTLVMLVAAFTGRDNILNAYQHAVNDKYRFFSFGDA--MFIKR 353
>gi|167761168|ref|ZP_02433295.1| hypothetical protein CLOSCI_03573 [Clostridium scindens ATCC 35704]
gi|167660834|gb|EDS04964.1| hypothetical protein CLOSCI_03573 [Clostridium scindens ATCC 35704]
Length = 343
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 145/356 (40%), Positives = 200/356 (56%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F ++LP IA P+ R S+RL+V+ +S H+ ++ +L+ D +V
Sbjct: 1 MKRQDFYYELPEELIAQDPLEDRSSSRLLVLDKESGA---VSHHVFKEITDYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + E +I L R N W +P K K G + F
Sbjct: 58 INDTKVIPARLIGSKVG----TEAKIEILLLKRKENNIWETLVKPGKKAKIGTKISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L V+D + G L+ F+ GI E + +G +PLPPYI + D Y
Sbjct: 111 -GEGLLVGEVVDIVDEGNRLIQFTYEGI-FEEILDKLGQMPLPPYITHQ----LEDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA GS AAPTAGLHFT LL + GI + +TLHVG GTF PVKV++ +H M
Sbjct: 165 QTVYATHTGSAAAPTAGLHFTPELLEEIERKGIDIARITLHVGLGTFRPVKVDEITEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ID A +N K G R++ VGTTS R +E+A E G + SG+T IFI PG
Sbjct: 225 HSEFFQIDEEAAMKINRAKDSGKRVICVGTTSCRTIESAADETGHLKACSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD L+
Sbjct: 285 YQFKILDCLITNFHLPESTLIMLVSALAGREHVLAAYEEAVKERYRFFSFGDAMLI 340
>gi|83747288|ref|ZP_00944330.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ralstonia
solanacearum UW551]
gi|207744280|ref|YP_002260672.1| s-adenosylmethionine:trna ribosyltransferase-isomerase (queuosine
biosynthesis protein quea) [Ralstonia solanacearum
IPO1609]
gi|83726112|gb|EAP73248.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ralstonia
solanacearum UW551]
gi|206595685|emb|CAQ62612.1| s-adenosylmethionine:trna ribosyltransferase-isomerase (queuosine
biosynthesis protein quea) [Ralstonia solanacearum
IPO1609]
Length = 362
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 152/356 (42%), Positives = 205/356 (57%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FDFDLPP IA + R ++RL+ VH + D +DL +L D +V
Sbjct: 8 LTLSDFDFDLPPELIAQTALPDRTASRLLAVHRDAPG-THFDDRQFADLVDYLRPGDLLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A RF I + + ++ R SK G L
Sbjct: 67 FNDTRVIKA-----RFFGHKASGGRIEVLVERLLDEHTVLAQIRSSKSPVTGSRLRL--- 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ TV + L F +EL I G +PLPPYI + D+ D Y
Sbjct: 119 --ADAFDVTVGPRQEPF-FTLRFPQPALEL---IEQYGRLPLPPYI--EHTPDSFDETRY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF L +RL ++G++ F+TLHVGAGTF PV+VE+ +H M
Sbjct: 171 QTVYARTPGAVAAPTAGLHFDDALFARLDAMGVRRGFLTLHVGAGTFSPVRVENIAEHRM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I A+A+ + ++ GGR+++VGTTS+R LE+A DG + SG T+IFITPG
Sbjct: 231 HSEWYAISPELAEAIRATRAAGGRVIAVGTTSMRALESAAQPDGTLAAGSGETDIFITPG 290
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI+ YRF+SYGD L
Sbjct: 291 YRFRLVDALVTNFHLPKSTLLMLVSAFAGLETIRAAYRHAIAQRYRFFSYGDAMFL 346
>gi|295105586|emb|CBL03130.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Faecalibacterium prausnitzii SL3/3]
Length = 342
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 145/358 (40%), Positives = 203/358 (56%), Gaps = 19/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+ K+F +DLP IA P PRD+ARLMV+ I + DLP FL D +V
Sbjct: 1 MLKKDFWYDLPKELIAQEPASPRDAARLMVLSQKDDS---IQHKVFRDLPEFLEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHM--RVSPNSWSVYARPSKVIKKGDILHFF 118
NN+KV+ A++ GV+ + C L + +V + W A+P K ++ G + F
Sbjct: 58 VNNSKVLPARIVGVK------QPTGAVCELLLLRQVKGDQWECLAKPGKRMQPGTKVSF- 110
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
G L A V + G + F L ++ G +PLPPYI ++ D
Sbjct: 111 ---GDGSLTAVVDETMEDGNKYVTFYYDTETLYEKLDEFGKMPLPPYITKQ----LEDQS 163
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YAK GS AAPTAGLHFT L+ + ++G+ + VTLHVG GTF PV+ ++ DH
Sbjct: 164 QYQTVYAKELGSAAAPTAGLHFTPELMDTIRAMGVGIAEVTLHVGLGTFRPVQEDEISDH 223
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE I TA+ + K+ G R+++VGTTS R LE A + G I SG T+IF+
Sbjct: 224 KMHSEWYSISEETARRIRETKAAGHRVIAVGTTSCRTLEAAAAKYGEIKACSGNTSIFLY 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PG +F +D L++NFHLP+STL+MLVSA G E+T Y+ A++ YRF+S+GD L+
Sbjct: 284 PGVKFNCIDGLITNFHLPESTLIMLVSALYGYEKTMHAYEVAVAEKYRFFSFGDAMLI 341
>gi|206969507|ref|ZP_03230461.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH1134]
gi|229180694|ref|ZP_04308034.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus 172560W]
gi|229192629|ref|ZP_04319590.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus ATCC 10876]
gi|206735195|gb|EDZ52363.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH1134]
gi|228590936|gb|EEK48794.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus ATCC 10876]
gi|228602839|gb|EEK60320.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus 172560W]
Length = 350
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 150/353 (42%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKLKGVQLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT +G + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHEGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGD 337
>gi|172058105|ref|YP_001814565.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Exiguobacterium sibiricum 255-15]
gi|229598027|sp|B1YJR0|QUEA_EXIS2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|171990626|gb|ACB61548.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Exiguobacterium sibiricum 255-15]
Length = 347
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 147/356 (41%), Positives = 204/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF LP +IA P+ R S++LMVV+ + D+ ++ N+ D +V
Sbjct: 1 MDVNLFDFHLPEEQIAQVPLLDRTSSKLMVVNRETGA---LRHEKFHDIVSYFNAGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L GV+ +I L + S + W A+P+K +K G +L F
Sbjct: 58 INDTKVLPARLFGVK----EETGGKIELLLLKQTSDDVWETLAKPAKRVKPGTVLSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L A ++ + G +L FS +GI E + +GT+PLPPYI + D Y
Sbjct: 111 -GDGLLRAECVEALDDGGRILKFSYTGIFYE-VLDQLGTMPLPPYIHEQ----LEDQDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +GS AAPTAGLHFT LL L G+++ +TLHVG GTF PV V+D D H M
Sbjct: 165 QTVYARERGSAAAPTAGLHFTPELLQALTDKGVQLAPLTLHVGLGTFRPVSVDDVDSHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + +A+ L + GGRI++VGTTS R LET + G SG+T+IFI PG
Sbjct: 225 HSEYYELPESSAKILRETRKNGGRIIAVGTTSTRTLETVIRDHGDFVEASGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ +D L++NFHLPKSTL+MLVSA E Y+ A++ YRF+S+GD L
Sbjct: 285 QEIKGIDGLITNFHLPKSTLIMLVSALSTREHILHAYEEAVAQNYRFFSFGDAMFL 340
>gi|170017579|ref|YP_001728498.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Leuconostoc
citreum KM20]
gi|169804436|gb|ACA83054.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Leuconostoc
citreum KM20]
Length = 355
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 147/360 (40%), Positives = 211/360 (58%), Gaps = 15/360 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FD+DLP + IA P+ RD++RL+V+ + D D+ ++N DAIV
Sbjct: 8 QLADFDYDLPEALIAQTPLKQRDTSRLLVLDADTGA---YQDKHFYDILDYVNPGDAIVM 64
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NN++V+ A+L+GVR E + H V W RP+K G + F
Sbjct: 65 NNSRVLPARLHGVRPETGGHAEVLLLRQDHGDV----WETLVRPAKKSPVGSTIVFGDDV 120
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
Q + ATV+ + G + F GI + + +G +PLPPYI K R YQ
Sbjct: 121 TQPIMTATVVGELEHGGRYVEFHYDGIFMAL-LDKLGEMPLPPYIKEKLADQER----YQ 175
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T Y+K+ GS AAPTAGLH+T LL+++ + G+K +TLHVG GTF PV+ E+ +DH MH
Sbjct: 176 TVYSKVDGSAAAPTAGLHWTPELLNQVRAKGVKTVELTLHVGLGTFRPVEEENIEDHKMH 235
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPG 300
SE + A LN V+ GGRI++ GTTS+R LET ++ +G + SG+T+IFI PG
Sbjct: 236 SEFYQLSQDAADTLNQVRENGGRIIATGTTSIRTLETIGSKFEGKLQADSGWTDIFIKPG 295
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
Y++ VD ++NFHLPKSTL+MLV+AF G + YQHA++ YRF+S+GD +F KR
Sbjct: 296 YKWTTVDAFITNFHLPKSTLVMLVAAFTGRDNILNAYQHAVAEQYRFFSFGDA--MFIKR 353
>gi|160945180|ref|ZP_02092406.1| hypothetical protein FAEPRAM212_02699 [Faecalibacterium prausnitzii
M21/2]
gi|158442911|gb|EDP19916.1| hypothetical protein FAEPRAM212_02699 [Faecalibacterium prausnitzii
M21/2]
Length = 345
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 145/358 (40%), Positives = 203/358 (56%), Gaps = 19/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+ K+F +DLP IA P PRD+ARLMV+ I + DLP FL D +V
Sbjct: 4 MLKKDFWYDLPKELIAQEPASPRDAARLMVLSQKDDS---IQHKVFRDLPEFLEPGDLLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHM--RVSPNSWSVYARPSKVIKKGDILHFF 118
NN+KV+ A++ GV+ + C L + +V + W A+P K ++ G + F
Sbjct: 61 VNNSKVLPARIVGVK------QPTGAVCELLLLRQVKGDQWECLAKPGKRMQPGTKVSF- 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
G L A V + G + F L ++ G +PLPPYI ++ D
Sbjct: 114 ---GDGSLTAVVDETMEDGNKYVTFYYDTETLYEKLDEFGKMPLPPYITKQ----LEDQS 166
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YAK GS AAPTAGLHFT L+ + ++G+ + VTLHVG GTF PV+ ++ DH
Sbjct: 167 QYQTVYAKELGSAAAPTAGLHFTPELMDTIRAMGVGIAEVTLHVGLGTFRPVQEDEISDH 226
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE I TA+ + K+ G R+++VGTTS R LE A + G I SG T+IF+
Sbjct: 227 KMHSEWYSISEETARRIRETKAAGHRVIAVGTTSCRTLEAAAAKYGEIKACSGNTSIFLY 286
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PG +F +D L++NFHLP+STL+MLVSA G E+T Y+ A++ YRF+S+GD L+
Sbjct: 287 PGVKFNCIDGLITNFHLPESTLIMLVSALYGYEKTMHAYEVAVAEKYRFFSFGDAMLI 344
>gi|300813231|ref|ZP_07093599.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Peptoniphilus sp. oral taxon 836 str. F0141]
gi|300512684|gb|EFK39816.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Peptoniphilus sp. oral taxon 836 str. F0141]
Length = 339
Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 146/357 (40%), Positives = 203/357 (56%), Gaps = 18/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P RD +RLM+++ I+ ++ +LN+ D +V
Sbjct: 1 MKTSDFSYDLPSELIAQHPAQKRDQSRLMLLNKKTG---EINHKKFYNIIDYLNNGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A++ F H +++ I L + ++W A+P K +K G + F
Sbjct: 58 LNDTRVMPARI----FGHRPEKDESIEILL-LNHKGDTWETLAKPGKKLKIGTEIIF--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L+A V+D G L F SGI E + +G +PLPPYI K D Y
Sbjct: 110 --SDELKAEVVDISEDGSRFLKFIYSGI-FEEILDRLGEMPLPPYIQEK----LEDKERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT LL ++ GI++ F+TLHVG GTF PVKVED H M
Sbjct: 163 QTVYSKEIGSAAAPTAGLHFTKELLKKIEEKGIEICFITLHVGLGTFRPVKVEDVTKHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I AQ +N K G RIV+VGTTS+R LE+A + G + SG+T+IFI P
Sbjct: 223 HSEFYIIRDDVAQKINKAKDEGRRIVAVGTTSIRTLESAADDKGYVKAKSGWTDIFIYPP 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ VD L++NFHLP+STL+MLVS+ E Y A+ YRF+S+GD ++
Sbjct: 283 YKFKCVDALITNFHLPESTLIMLVSSLSTREIILNAYNVAVKDKYRFFSFGDAMFIY 339
>gi|325201501|gb|ADY96955.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis M01-240149]
Length = 346
Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 209/356 (58%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P++ + D + DLP ++ + D +V
Sbjct: 1 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPDMP----MQDRVFGDLPDYVEAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDSG-----GRIEALIERVLDSHTALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 109 --EGGIRAVMVGR--EGELFCLRFEGGQTVYELLEQNGHLPLPPYI--ERAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+VE ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVEKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + TA A+ + K+RG ++ +VGTTS+R LE+A E G + G T+IFITPG
Sbjct: 223 HSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAAHETGHLKDGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF D L++NFHLPKSTLLMLVSAF G+ + Y++A+ YRF+SYGD +L
Sbjct: 283 YRFNVADRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGDAMVL 338
>gi|317121691|ref|YP_004101694.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Thermaerobacter marianensis DSM 12885]
gi|315591671|gb|ADU50967.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Thermaerobacter marianensis DSM 12885]
Length = 353
Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 146/359 (40%), Positives = 214/359 (59%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V EFD++LPP IA P+ RD++RLMVV + I H DLP FL + D +V
Sbjct: 1 MRVDEFDYELPPELIAQEPLPRRDASRLMVV--DRDSGRWIHAHF-RDLPRFLRAGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V A+L G R + L + W ARP + ++ G +
Sbjct: 58 LNDTRVRPARLYGRRTTG-----GHVEFLLLQPLDDGRWLALARPGRRLRPGTEVVC--- 109
Query: 121 DGQSR-LEATVIDKWNTGE-ILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
G+ R L V + ++GE ++ + G ++ + +G +PLPPYI + +D
Sbjct: 110 -GEERPLRVRVEEVRDSGERVIRLEPPQGETVDETLHRLGRVPLPPYIR----TELKDPE 164
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YA+ +GSVAAPTAGLHFT LL L G+++ ++TLHVG GTF PV + ++H
Sbjct: 165 RYQTVYAREEGSVAAPTAGLHFTPELLEELQDQGVRIAYLTLHVGVGTFRPVTAQRVEEH 224
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E ++ A A+N+ +S GGR+++VGTT R LET +DG + P SG+T++FI
Sbjct: 225 RMHAEFFRVEPEAAAAINAARSAGGRVIAVGTTVTRTLETVAADDGTVRPGSGWTDLFIY 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGYRF+A+D L++NFHLP+STL+MLV+A G E T Y+ A++ YRF+S+GD L+
Sbjct: 285 PGYRFKAIDGLITNFHLPRSTLIMLVAALLGKERTLAAYREAVARRYRFFSFGDAMLIL 343
>gi|121535582|ref|ZP_01667389.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Thermosinus carboxydivorans Nor1]
gi|121305822|gb|EAX46757.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Thermosinus carboxydivorans Nor1]
Length = 339
Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 148/357 (41%), Positives = 201/357 (56%), Gaps = 18/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +FD+ LP IA +P PRD +RL+V+ I +LP +L D +V
Sbjct: 1 MLVTDFDYYLPEELIAQQPCEPRDHSRLLVLDRRTGN---IEHRRFYNLPDYLQPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L G + + I L R++ + W +P K + G + F +
Sbjct: 58 FNNTKVIPARLIGAKAGTGGK----IEVFLLNRLTSDEWETLVKPGKRARPGTQVVFGDE 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L ++ + G ++ F+ SG+ E + +G PLPPYI + R Y
Sbjct: 114 -----LSCEILASTDYGGRIVRFNYSGV-FEDILDRLGETPLPPYIKTRLADKDR----Y 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL R+ + GI + F+TLHVG GTF PV V + H M
Sbjct: 164 QTVYAKERGSAAAPTAGLHFTPELLDRIKAKGINLAFITLHVGLGTFRPVTVSNITQHTM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + TA +N K GGRI++VGTT++R LET G + SG+T+IFI PG
Sbjct: 224 HREYYSVSPETAALINQTKQAGGRIIAVGTTAVRTLETVGA-GGFVESGSGWTDIFIYPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YRF+ VD L++NFHLP+STLLMLVSA G E Y A+ YRF+S+GD L+
Sbjct: 283 YRFKIVDALVTNFHLPQSTLLMLVSALAGRENIMNAYHVAVREKYRFFSFGDAMLIL 339
>gi|15895551|ref|NP_348900.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
acetobutylicum ATCC 824]
gi|21263900|sp|Q97GT2|QUEA_CLOAB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|15025288|gb|AAK80240.1|AE007729_7 Queuine synthetase, queA [Clostridium acetobutylicum ATCC 824]
gi|325509700|gb|ADZ21336.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
acetobutylicum EA 2018]
Length = 341
Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 142/356 (39%), Positives = 201/356 (56%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++FD+ LP IA P RD RLMVV + + D+ +LN D +V
Sbjct: 1 MQLEDFDYYLPEELIAQHPCDKRDECRLMVVDKKSG---EVEHRIFKDVIDYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + E L R+ ++W +P K K G F
Sbjct: 58 LNDTRVLPARLIGNKVGTGGKME----FLLLKRIDKDTWETLVKPGKRAKVGAEFEF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A + G ++ F GI E + +G +PLPPYI + + +Y
Sbjct: 111 -GGGVLKAVIKSIGEDGNRVVEFKYEGI-FEEILDKLGQMPLPPYITE----ELENKEEY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT+ LL ++ + GIK F+TLHVG GTF PVKVE+ + H M
Sbjct: 165 QTVYSKNNGSAAAPTAGLHFTNELLDKIRAKGIKTVFLTLHVGLGTFRPVKVENIESHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + +A +N + GGRI+SVGTTS R LET E G + SG+T+I+I PG
Sbjct: 225 HSEYYMLSKESADTINETRKNGGRIISVGTTSTRTLETIADEKGNVREQSGWTDIYIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+++ VD L++NFHLPKSTL+MLVSA + Y+ A+ + YRF+S+GD +
Sbjct: 285 YKYKIVDGLITNFHLPKSTLVMLVSALSSRDNILNAYKIAVENRYRFFSFGDAMFI 340
>gi|218295523|ref|ZP_03496336.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Thermus
aquaticus Y51MC23]
gi|218244155|gb|EED10681.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Thermus
aquaticus Y51MC23]
Length = 345
Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 153/360 (42%), Positives = 208/360 (57%), Gaps = 23/360 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D+ LPP RIA V PRD AR+MVV+ P ++ V DLP FL D +VFN
Sbjct: 4 LEAYDYHLPPERIAQEGVEPRDLARMMVVY--REGPFRVAHRRVRDLPEFLRPGDLLVFN 61
Query: 63 NTKVITAQLNGVRFCHINRREK--EISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS- 119
+KVI A+L + R+ + L +P W P++ G L F S
Sbjct: 62 ESKVIPARL-------LARKPTGGRVEVLLVQERAPGLWEALLGPARRAPVGTELFFLSP 114
Query: 120 QDGQS--RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+D + L+A V+ G LL I G +L + VG +PLPPYI + P++
Sbjct: 115 RDWRPVPGLKAEVVGVEADGVRLL--QIQG-DLLAHLEEVGEVPLPPYIKAQIPLE---- 167
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YAK GSVAAPTAGLHFT L+ RL +G++++F+TLHVG GTF PVK D +
Sbjct: 168 -RYQTVYAKRPGSVAAPTAGLHFTPELMERLRGMGVELHFLTLHVGPGTFRPVK-GDPEK 225
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+E I TA A+N K+ G R+++VGTT +R LE+A E + +G T +FI
Sbjct: 226 HAMHAEPYEIPEATALAVNRAKAEGRRVIAVGTTVVRALESAYREGEGVAAGAGETRLFI 285
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
P Y F+ +D L +NFHLP+STLLMLV+AF G E T + Y+ A+ YRFYS GD L+
Sbjct: 286 RPPYAFKVIDGLFTNFHLPRSTLLMLVAAFLGYERTMEAYRLAVEEGYRFYSLGDAMLIL 345
>gi|325129515|gb|EGC52342.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis OX99.30304]
gi|325135638|gb|EGC58255.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis M0579]
gi|325207481|gb|ADZ02933.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis NZ-05/33]
Length = 346
Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 209/356 (58%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P++ + D + DLP ++ + D +V
Sbjct: 1 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPDMP----LQDRVFGDLPDYVEAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDSG-----GRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 109 --EGGIRAVMVGR--EGELFCLRFEGGQTVYELLEQNGHLPLPPYI--ERAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+VE ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVEKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + TA A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 223 HSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF VD L++NFHLPKSTLLMLVSAF G+ + Y++A+ YRF+SYGD +L
Sbjct: 283 YRFNVVDRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGDAMVL 338
>gi|325139519|gb|EGC62059.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis CU385]
Length = 356
Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 208/356 (58%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P++ + D + DLP ++ + D +V
Sbjct: 11 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPDMP----LQDRVFGDLPDYVEAGDVLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 67 FNNTKVMKARLFGQKDSG-----GRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A + + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 119 --EGGIRAVTVGR--EGELFCLRFEGGETVYELLEQNGHLPLPPYI--ERAADADDDSRY 172
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 173 QTVYAKYQGAVAAPTAGLHFTEELLHRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 232
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + TA A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 233 HSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 292
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF VD L++NFHLPKSTLLMLVSAF G+ + Y+HA+ YRF+SYGD +L
Sbjct: 293 YRFNVVDRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRHAVEREYRFFSYGDAMVL 348
>gi|319786810|ref|YP_004146285.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Pseudoxanthomonas suwonensis 11-1]
gi|317465322|gb|ADV27054.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Pseudoxanthomonas suwonensis 11-1]
Length = 343
Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 155/362 (42%), Positives = 210/362 (58%), Gaps = 28/362 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R ++R++VV P +D V DLP L D +V
Sbjct: 1 MKKSDFHYDLPEELIAQAPLAERSASRMLVVPPGEGE---FADMHVRDLPELLQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHM---RVSPNSWS-VYARPSKVIKKGDILH 116
FN+T+VI A+L G +KE + + R+ P++ + V R SK + G +
Sbjct: 58 FNDTRVIPARLFG---------QKESGGRVEILIERLLPDAQARVQMRASKSPRPGSRIV 108
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDAR 175
DG + E D + V E LE+ ++ VG +PLPPYI R+ DA
Sbjct: 109 L---DGGGQAEVVGRD-----DAFFVVRFELDEPLEQWLARVGRLPLPPYIQRQ--PDAA 158
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT +A+ G+VAAPTAGLHF LL RL G++ VTLHVGAGTF PV+VED
Sbjct: 159 DAERYQTVFAREVGAVAAPTAGLHFDHALLQRLRERGVEFGHVTLHVGAGTFQPVRVEDV 218
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+H MHSE + A + ++ GGR+++VGTT +R LE+A DG + P++G T I
Sbjct: 219 REHTMHSEWLNVGAELVAQIRRTRAAGGRVIAVGTTVVRALESA-MRDGQLQPFAGETRI 277
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGYR R+VD L++NFHLP+STLLMLVSAF G E Y+HA+ YRF+SYGD L
Sbjct: 278 FIFPGYRIRSVDALVTNFHLPESTLLMLVSAFAGQERIFAAYRHAVEQRYRFFSYGDAML 337
Query: 356 LF 357
L+
Sbjct: 338 LW 339
>gi|221064800|ref|ZP_03540905.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Comamonas
testosteroni KF-1]
gi|220709823|gb|EED65191.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Comamonas
testosteroni KF-1]
Length = 362
Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 153/367 (41%), Positives = 211/367 (57%), Gaps = 23/367 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDFDLP S IA P R ++RL+ S P +D + +LP L D +VFN
Sbjct: 10 LSDFDFDLPESLIAQHPTAVRSASRLL---DGRSLP--ATDRIFRELPDLLQPGDLLVFN 64
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKVI A++ G + +I + + N + R SK G +H
Sbjct: 65 DTKVIKARVFGEKAS-----GGKIELLVERVLQNNEVVAHMRVSKKPLPGAKIHLCGGLR 119
Query: 123 QSRLEATVIDKW-NTGEILLVFSISGIELERQISLV---GTIPLPPYIARKR-----PID 173
EAT++ +W + L S G + E L+ G +PLPPYI R++ P +
Sbjct: 120 NGGFEATLLGRWPDENGPLFHLSFKGNQGESPYELLEQFGHLPLPPYIERQQNAEHDPDE 179
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT +A G+VAAPTA LHF +L+ L + G++ VTLHVGAGTF PVK E
Sbjct: 180 KEDSERYQTVFAAHPGAVAAPTAALHFDETVLAALQAKGVERASVTLHVGAGTFQPVKTE 239
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
+ DH MHSE I PT A+ + RGGRI++VGTT++R LE+ I +G T
Sbjct: 240 NLADHTMHSEWYDIPLPTLAAMERCRQRGGRIIAVGTTTVRTLESWAKYGNI----TGDT 295
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFITPG++++ VD+L++NFHLPKSTL+MLVSAF G E MYQHAI+ YRF+SYGD+
Sbjct: 296 SIFITPGFQYQVVDMLITNFHLPKSTLMMLVSAFAGYEHIMAMYQHAIAQHYRFFSYGDS 355
Query: 354 SLLFQKR 360
LL ++R
Sbjct: 356 MLLERQR 362
>gi|56963322|ref|YP_175053.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
clausii KSM-K16]
gi|81600944|sp|Q5WHR3|QUEA_BACSK RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|56909565|dbj|BAD64092.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
clausii KSM-K16]
Length = 342
Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 149/352 (42%), Positives = 202/352 (57%), Gaps = 16/352 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V EFDFDLP IA P+ R ++RL+VV ISD + DL L+ D +V
Sbjct: 1 MDVNEFDFDLPEELIAQTPLKTRTNSRLLVVDKKTKA---ISDRMFPDLIEALSPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G + + I L ++ + W +P+K +K G + F
Sbjct: 58 LNDTKVMPARLLGEKV----ETKAVIELLLLKQLEGDCWETLVKPAKRVKIGTEVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L A G + F SG+ E + +GT+PLPPYI ++R DA Y
Sbjct: 111 -GDGKLTAICTAVQPQGGRIFEFRYSGVFYEL-LEELGTMPLPPYI-KERLEDADRY--- 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHF+ LL + + G+K+ ++TLHVG GTF PV +DH M
Sbjct: 165 QTVYAKQIGSAAAPTAGLHFSEQLLLEIEAKGVKIVYITLHVGLGTFRPVSASSVEDHQM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + A L S + GG I++VGTTS R LET ++ G SG+T+IFI PG
Sbjct: 225 HAEYYQVTEEAAHTLASARENGGNIIAVGTTSARTLETIYSDHGAFVAASGWTSIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
Y+++A+D L++NFHLPKSTL+MLVSA G E Y HAI YRF+S+GD
Sbjct: 285 YKYQAIDGLLTNFHLPKSTLVMLVSALIGKEALMDAYAHAIKERYRFFSFGD 336
>gi|46199001|ref|YP_004668.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Thermus
thermophilus HB27]
gi|55981027|ref|YP_144324.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Thermus
thermophilus HB8]
gi|81567700|sp|Q72JS5|QUEA_THET2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|81600605|sp|Q5SMH0|QUEA_THET8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|56966767|pdb|1WDI|A Chain A, Crystal Structure Of Tt0907 From Thermus Thermophilus Hb8
gi|46196625|gb|AAS81041.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Thermus
thermophilus HB27]
gi|55772440|dbj|BAD70881.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Thermus
thermophilus HB8]
Length = 345
Score = 256 bits (654), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 202/358 (56%), Gaps = 19/358 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D+ LPP +IA V PRD ARLMVV+ P ++ V DLP FL D +VFN
Sbjct: 4 LEAYDYHLPPEQIAQEGVEPRDMARLMVVY--REGPFRVAHKRVRDLPEFLRPGDVLVFN 61
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+KVI A+L + ++ L SP W P++ G L S
Sbjct: 62 ESKVIPARLLARKPTG-----GKVEILLVRERSPGLWEALLGPARKAPPGTRLLLLSPKD 116
Query: 123 QSR---LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ L+A V+ G LL F +L + VG +PLPPYI K P++
Sbjct: 117 LAPVPGLQAEVVAVEEDGVRLLRFQG---DLVAHLEEVGEVPLPPYIKAKIPME-----R 168
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ GSVAAPTAGLHFT LL RL +G+++ F+TLHVG GTF PVK D + H
Sbjct: 169 YQTVYARRPGSVAAPTAGLHFTPELLERLREMGVELRFLTLHVGPGTFRPVK-GDPEKHE 227
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH+E I A+A+N K+ G R+V+VGTT +R LE+A E + G T +FI P
Sbjct: 228 MHAEPYAIPEEVAEAVNRAKAEGRRVVAVGTTVVRALESAYREGVGVVAGEGETRLFIRP 287
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+ VD L +NFHLP+STLLMLV+AF G E T + Y+ A++ YRFYS GD L+
Sbjct: 288 PYTFKVVDALFTNFHLPRSTLLMLVAAFLGRERTLEAYRLAVAEGYRFYSLGDAMLIL 345
>gi|28895709|ref|NP_802059.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes SSI-1]
gi|28810958|dbj|BAC63892.1| putative S-adenosylmethionine-tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes SSI-1]
Length = 305
Score = 256 bits (654), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 143/312 (45%), Positives = 192/312 (61%), Gaps = 18/312 (5%)
Query: 43 DHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVY 102
DH++ L N DA+V NNT+V+ A+L G + + L + W V
Sbjct: 7 DHIIDQL----NPGDALVMNNTRVLPARLYGEK----PDTHGHVELLLLKNTQGDQWEVL 58
Query: 103 ARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPL 162
A+P+K +K G ++F G L+AT+ID+ G ++ FS GI LE SL G +PL
Sbjct: 59 AKPAKRLKVGSQVNF----GDGHLKATIIDELEHGGRIVEFSYDGIFLEVLESL-GEMPL 113
Query: 163 PPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHV 222
PPYI K D YQT YAK GS AAPTAGLHFT++LL ++ + G+ + ++TLHV
Sbjct: 114 PPYIHEK----LEDAERYQTVYAKENGSAAAPTAGLHFTTDLLKKIEAKGVHLVYLTLHV 169
Query: 223 GAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE 282
G GTF PV V++ D+H MHSE + AQ L VK GGR+V+VGTTS+R LET ++
Sbjct: 170 GLGTFRPVSVDNLDEHDMHSEFYSLSEEAAQTLRDVKQAGGRVVAVGTTSIRTLETIGSK 229
Query: 283 -DGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAI 341
G I SG+TNIFI PGY+F+ VD +NFHLPKSTL+MLVSAF G + + Y+HA+
Sbjct: 230 FQGDIQADSGWTNIFIKPGYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYRHAV 289
Query: 342 SHAYRFYSYGDT 353
YRF+S+GD
Sbjct: 290 DEKYRFFSFGDA 301
>gi|15677694|ref|NP_274855.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis MC58]
gi|21263921|sp|Q9JXW4|QUEA_NEIMB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|7227116|gb|AAF42193.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis MC58]
Length = 346
Score = 256 bits (654), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 208/356 (58%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P++ + D + DLP ++ + D +V
Sbjct: 1 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPDMP----LQDRVFGDLPDYVEAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDSG-----GRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A + + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 109 --EGGIRAVTVGR--EGELFCLRFEGGETVYELLEQNGHLPLPPYI--ERAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLHRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + TA A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 223 HSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF VD L++NFHLPKSTLLMLVSAF G+ + Y+HA+ YRF+SYGD +L
Sbjct: 283 YRFNVVDRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRHAVEREYRFFSYGDAMVL 338
>gi|242242912|ref|ZP_04797357.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus epidermidis W23144]
gi|242233627|gb|EES35939.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus epidermidis W23144]
Length = 354
Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 145/355 (40%), Positives = 209/355 (58%), Gaps = 18/355 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHL-VSDLPAFLNSNDAIVF 61
+++FD+ LP S IA P+ RD +RL+V+ + HL D+ + D +V
Sbjct: 16 IEDFDYHLPESLIAQTPLKNRDQSRLLVLRKDTGE----MTHLHFRDVIHYFEPGDTLVL 71
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L G++ ++ + ++ N W V +P+K IKKG L+F
Sbjct: 72 NDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKKGHRLNF---- 123
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G ++ A I++ G ++ GI L+ ++ +G +PLPPYI K +D D YQ
Sbjct: 124 GDGKIVAECIEELEQGGRIMRLHYEGI-LQERLDELGEMPLPPYI--KERLDDPDR--YQ 178
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YAK GS AAPTAGLHFT +LL+++ G+ + F+TLHVG GTF PV V++ DDH MH
Sbjct: 179 TVYAKESGSAAAPTAGLHFTDDLLNKIEQKGVHIAFITLHVGLGTFRPVSVDNIDDHEMH 238
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
SE + TA LN K G R++SVGTTS R LET + SG+T+IFI PG+
Sbjct: 239 SEYYQMTQKTADLLNQTKENGKRVISVGTTSTRTLETIRRDHPQFVATSGWTDIFIYPGF 298
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD L+
Sbjct: 299 EFKAIDGLITNFHLPKSTLVMLVSAFSSKKYILNAYHKAVEMEYRFFSFGDAMLI 353
>gi|282882961|ref|ZP_06291565.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Peptoniphilus lacrimalis 315-B]
gi|281297168|gb|EFA89660.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Peptoniphilus lacrimalis 315-B]
Length = 339
Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 145/357 (40%), Positives = 204/357 (57%), Gaps = 18/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P RD +RLM+++ I+ ++ +LN+ D +V
Sbjct: 1 MKTSDFSYDLPSELIAQHPAQKRDQSRLMLLNKKTG---EINHKKFYNIIDYLNNGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A++ F H +++ I L + ++W A+P K +K G + F
Sbjct: 58 LNDTRVMPARI----FGHRPEKDESIEILL-LNHKGDTWETLAKPGKKLKIGTEIIF--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L+A V+D G L F SGI E + +G +PLPPYI K D Y
Sbjct: 110 --SDELKAQVVDISEDGSRFLKFIYSGI-FEEILDRLGEMPLPPYIQEK----LEDKERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT LL ++ GI++ F+TLHVG GTF PVKVED H M
Sbjct: 163 QTVYSKEIGSAAAPTAGLHFTKELLKKIEEKGIEICFITLHVGLGTFRPVKVEDVTKHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I A+ +N K G RIV+VGTTS+R LE+A+ + G + SG+T+IFI P
Sbjct: 223 HSEFYIIRDDVAKKINKAKDEGRRIVAVGTTSIRTLESASDDKGYVEAKSGWTDIFIYPP 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ VD L++NFHLP+STL+MLVS+ E Y A+ YRF+S+GD ++
Sbjct: 283 YKFKCVDALITNFHLPESTLIMLVSSLSTREIILNAYNVAVKEKYRFFSFGDAMFIY 339
>gi|226939526|ref|YP_002794599.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Laribacter
hongkongensis HLHK9]
gi|226714453|gb|ACO73591.1| QueA [Laribacter hongkongensis HLHK9]
Length = 380
Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 155/359 (43%), Positives = 210/359 (58%), Gaps = 20/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+ LP IA P R ++RL+ V P ++D +DLP L+ +D +V
Sbjct: 38 MQLSDFDYHLPEHLIAQFPPAERGNSRLLHV-----SPAGLADLQFADLPGLLSPDDLLV 92
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G R E + L R + + R SK K G L F
Sbjct: 93 VNDTRVIKARLFG-RKASGGAVEALVERVLDERTA----LAHVRASKSPKPGSRLVF--- 144
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
R EA ++++ GE+ L+ + + G +PLPPYI R D Y
Sbjct: 145 --ADRWEAEMVERQ--GELFLLRFPGDTSVLDILDAAGHLPLPPYITRS--AGDNDDERY 198
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ QG+VAAPTAGLHFT L++ + + GI V VTLHVGAGTF PV+V++ +H M
Sbjct: 199 QTIYAREQGAVAAPTAGLHFTDGLMAAIRARGIDVARVTLHVGAGTFQPVRVDNIAEHKM 258
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I T A+ + ++RGGR+V+VGTTS+R LE A + G + T+IFITPG
Sbjct: 259 HSERFVIPQATVDAIAACRARGGRVVAVGTTSMRALE-AGAQSGELRAGPSETDIFITPG 317
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRFR VD L++NFHLPKSTL+MLVSAF G E + Y+HAI YRF+SYGD LL ++
Sbjct: 318 YRFRVVDRLVTNFHLPKSTLMMLVSAFAGTETIRAAYRHAIERQYRFFSYGDAMLLERQ 376
>gi|83647164|ref|YP_435599.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Hahella
chejuensis KCTC 2396]
gi|123531953|sp|Q2SDV0|QUEA_HAHCH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|83635207|gb|ABC31174.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Hahella
chejuensis KCTC 2396]
Length = 351
Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 151/361 (41%), Positives = 209/361 (57%), Gaps = 20/361 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDF+LPP IA RP+ R S+RL+ + I+ DL +N D +V
Sbjct: 1 MRVDDFDFELPPELIARRPLAERSSSRLLCLDAETG---EINHRGFKDLLGMVNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKG-DILHFFS 119
FN+T+VI A+L G + R ++ + VS + R SK K G +IL
Sbjct: 58 FNDTRVIPARLFGQK-----RSGGKVEVMVERVVSMTEMLAHVRASKAPKPGVEILI--- 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ T++++ G++ + G + + G +PLPPYI R+ + R+
Sbjct: 110 ---EENYVLTMVER--EGDLFRLRVSQGGSVSELLERCGHMPLPPYIDREDDLSDRER-- 162
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y++ G+VAAPTAGLHF LL + G++ FVTLHVGAGTF PV+V+ DH
Sbjct: 163 YQTVYSRQPGAVAAPTAGLHFDEALLLAMSQKGVETAFVTLHVGAGTFQPVRVDVVQDHQ 222
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE + A + + VK+ GGR+V+VGTT++R LETA + G I P++G T+IFI P
Sbjct: 223 MHSEYLEVSADVCERVRQVKAAGGRVVAVGTTAVRALETA-SRSGSIEPYAGDTSIFIYP 281
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY F VD L++NFHLPKSTLLMLVSAF G E YQ AI YRF+SYGD L ++
Sbjct: 282 GYEFVTVDALVTNFHLPKSTLLMLVSAFAGREHILAAYQEAIEQRYRFFSYGDAMFLHRR 341
Query: 360 R 360
+
Sbjct: 342 Q 342
>gi|304385246|ref|ZP_07367591.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pediococcus
acidilactici DSM 20284]
gi|304328453|gb|EFL95674.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pediococcus
acidilactici DSM 20284]
Length = 347
Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 142/357 (39%), Positives = 208/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++F++DLP IA P+ RD++R++V+ ++D D+ LN DAIV
Sbjct: 6 LTTEDFNYDLPHELIAQTPIKKRDASRMLVLDHKTGE---MADKHFYDIVDQLNPGDAIV 62
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+++V+ A++ GV+ + L + + W +P++ K G + F
Sbjct: 63 MNDSRVMPARIYGVK----EETGGHLEVLLLHNIEGDRWETLVKPARRAKVGTKITF--- 115
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L ATV + + G + F GI +E + +G +PLPPYI K R Y
Sbjct: 116 -GDGSLTATVKKELDHGGREIEFEYDGIFME-ILEKLGEMPLPPYIKEKLDDPER----Y 169
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLH+T LL ++ G+K+ ++TLHVG GTF PV E+ +DH M
Sbjct: 170 QTVYSKEPGSAAAPTAGLHWTKELLQKVQDKGVKLVYLTLHVGLGTFRPVDEENIEDHKM 229
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + +A LN V+ GGRI++ GTTS+R LET T+ +G I P SG+T+IFI P
Sbjct: 230 HSEFYRLSEESAATLNEVRKNGGRIIATGTTSIRTLETIGTKFNGEIKPDSGWTDIFIKP 289
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY ++ VD ++NFHLPKSTL+MLV+AF G E Y+HA+ YRF+S+GD +
Sbjct: 290 GYEWKVVDAFITNFHLPKSTLVMLVAAFTGRETILNAYKHAVEEKYRFFSFGDAMFI 346
>gi|291542712|emb|CBL15822.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Ruminococcus bromii L2-63]
Length = 341
Score = 256 bits (653), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 139/356 (39%), Positives = 203/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ PRDS+RL+V+ + D+ +LN D +V
Sbjct: 1 MKTSDFYYDLPKELIAQTPLEPRDSSRLLVLDREKQ---TLEHKHFYDIIDYLNEGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+++V+ A++ G++ + ++ L +V+ N W +P K K G F
Sbjct: 58 ANDSRVLPARIYGIK----DETGAKVEFLLLKQVANNRWETLCKPGKKAKVGTKFSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L ATV++ + G ++ F + +G +PLPPYI + +D Y
Sbjct: 111 -GNGILRATVVEVKDDGNRIVDFDCEE-NFFTTLDKIGQMPLPPYIT----AELKDKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+ GS AAPTAGLHFT+ L+ R+ + GIK+ +VTLHVG GTF PVKV+D H M
Sbjct: 165 QTVYSHELGSAAAPTAGLHFTTELMDRIKAKGIKIAYVTLHVGLGTFRPVKVDDVTKHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA+ +N K GGR+++VGTTS R LE+ G + P GFT+IFI PG
Sbjct: 225 HSEHYEVPEETAKLINETKKNGGRVIAVGTTSCRTLESVAAMYGEVKPCEGFTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ F+ +D L++NFHLP+STL+MLVSAF G + Y+ A+ YRF+S+GD +
Sbjct: 285 FEFKVLDGLITNFHLPESTLIMLVSAFAGYDFIMNAYKEAVKEKYRFFSFGDAMFI 340
>gi|294624102|ref|ZP_06702847.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 11122]
gi|292601602|gb|EFF45594.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 11122]
Length = 464
Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 156/361 (43%), Positives = 218/361 (60%), Gaps = 24/361 (6%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+F +DLP IA P+ R ++RL+VV P+ P ++D V DLP L D ++FN+T
Sbjct: 113 DFHYDLPDELIAQAPLAERAASRLLVVPPS---PQALADRQVRDLPELLQPGDLLIFNDT 169
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQS 124
+VI A+L G + R E I L R + V SK K G ++ GQ
Sbjct: 170 RVIPARLFGHK-ASGGRVEILIERLLGERQA----RVQIGASKSPKAGSLIAL-DAGGQ- 222
Query: 125 RLEATVIDKWNTGEI-LLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTT 183
A V+ + GE LL F I LE + G +PLPPYI R+ ++ R+ YQT
Sbjct: 223 ---AEVLGR--DGEFYLLRFEIP-TPLEHWLLEAGRLPLPPYIRREPGVEDRER--YQTV 274
Query: 184 YAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSE 243
+A+ G+VAAPTAGLHF LL+RL G++ VTLHVGAGTF PV+V+ D H+MH+E
Sbjct: 275 FAREVGAVAAPTAGLHFDEPLLARLRERGVEFGHVTLHVGAGTFQPVRVDKLDQHVMHTE 334
Query: 244 IGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTE---DGIINPWSGFTNIFIT 298
+ A + + ++RGGR+++VGTT +R LE+A TTE +G + P++G T IFI
Sbjct: 335 WLNVGAALVEQVRRTRARGGRVIAVGTTVVRSLESAWRTTEAAPEGELQPFAGETQIFIL 394
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGYR R+VD +++NFHLP+STL+M+VSAF G E Y+HAI+ YRF+SYGD LL+
Sbjct: 395 PGYRIRSVDAMVTNFHLPESTLMMMVSAFAGRERIFAAYRHAIAQRYRFFSYGDAMLLWG 454
Query: 359 K 359
+
Sbjct: 455 R 455
>gi|229076049|ref|ZP_04209020.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock4-18]
gi|229098892|ref|ZP_04229828.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock3-29]
gi|229117918|ref|ZP_04247280.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock1-3]
gi|228665575|gb|EEL21055.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock1-3]
gi|228684565|gb|EEL38507.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock3-29]
gi|228707083|gb|EEL59285.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock4-18]
Length = 354
Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 150/353 (42%), Positives = 209/353 (59%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 5 MDINLFDFHLPEELIAQVPLEDRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 62 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 115 -GEGKLKATCTGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 169 QTVYAKEIGSAAAPTAGLHFTEELLEKLKKKGVQLAFITLHVGLGTFRPVSADTIEEHHM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT G + SG+T+IF+ P
Sbjct: 229 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHSGKLCAASGWTDIFMYP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY+F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 289 GYKFKAIDGLITNFHLPKSTLIMLVSAFSNRDNVLHAYNEAVKEKYRFFSFGD 341
>gi|196250110|ref|ZP_03148804.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Geobacillus sp. G11MC16]
gi|196210294|gb|EDY05059.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Geobacillus sp. G11MC16]
Length = 342
Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 148/357 (41%), Positives = 205/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF LP IA P+ R ++RLMV+ I ++ ++L+ D +V
Sbjct: 1 MKVDLFDFHLPEELIAQTPLPDRAASRLMVLDKQTGA---IRHETFRNIISYLHPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L ++ + W +P K ++ G L F
Sbjct: 58 LNDTRVMPARLYGEK----AETGGMVEVLLLKQLDGDRWETLVKPGKRVRPGTKLVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L+A +D G +L FS G+ + ++ +G +PLPPYI K R Y
Sbjct: 111 -GGGKLQAVCLDTLEHGGRVLEFSYEGL-FYQVLAELGEMPLPPYIKEKLDNPER----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GS AAPTAGLHFT LL + GI + F+TLHVG GTF PV+V+D + H M
Sbjct: 165 QTVYAREIGSAAAPTAGLHFTEELLDAIREKGIHIAFITLHVGLGTFRPVQVDDVEKHNM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN V++ GGRI++VGTTS R LET A DG SG+T+IFI P
Sbjct: 225 HAEFYQMSEETAAILNRVRANGGRIIAVGTTSTRTLETIANRHDGRFAAESGWTDIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF G E Y+ A+ YRF+S+GD L+
Sbjct: 285 GYEFKAIDGLVTNFHLPKSTLIMLVSAFAGREHILHAYEVAVKEQYRFFSFGDAMLI 341
>gi|270290975|ref|ZP_06197198.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pediococcus
acidilactici 7_4]
gi|270280371|gb|EFA26206.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pediococcus
acidilactici 7_4]
Length = 344
Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 142/357 (39%), Positives = 208/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++F++DLP IA P+ RD++R++V+ ++D D+ LN DAIV
Sbjct: 3 LTTEDFNYDLPHELIAQTPIKKRDASRMLVLDHKTGE---MADKHFYDIVDQLNPGDAIV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+++V+ A++ GV+ + L + + W +P++ K G + F
Sbjct: 60 MNDSRVMPARIYGVK----EETGGHLEVLLLHNIEGDRWETLVKPARRAKVGTKITF--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L ATV + + G + F GI +E + +G +PLPPYI K R Y
Sbjct: 113 -GDGSLTATVKKELDHGGREIEFEYDGIFME-ILEKLGEMPLPPYIKEKLDDPER----Y 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLH+T LL ++ G+K+ ++TLHVG GTF PV E+ +DH M
Sbjct: 167 QTVYSKEPGSAAAPTAGLHWTKELLQKVQDKGVKLVYLTLHVGLGTFRPVDEENIEDHKM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + +A LN V+ GGRI++ GTTS+R LET T+ +G I P SG+T+IFI P
Sbjct: 227 HSEFYRLSEESAATLNEVRKNGGRIIATGTTSIRTLETIGTKFNGEIKPDSGWTDIFIKP 286
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY ++ VD ++NFHLPKSTL+MLV+AF G E Y+HA+ YRF+S+GD +
Sbjct: 287 GYEWKVVDAFITNFHLPKSTLVMLVAAFTGRETILNAYKHAVEEKYRFFSFGDAMFI 343
>gi|300310560|ref|YP_003774652.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase)protein [Herbaspirillum seropedicae SmR1]
gi|300073345|gb|ADJ62744.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase)protein [Herbaspirillum seropedicae SmR1]
Length = 338
Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 153/355 (43%), Positives = 205/355 (57%), Gaps = 24/355 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LPP IA P+ R ++RL+ V ++D SD+ L + D +VFN
Sbjct: 4 LSDFDFELPPELIAQTPLAERSASRLLQVQGA-----QLTDRRFSDIVDLLQAGDLLVFN 58
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+VI A+L GV+ +I + + P + R SK G +
Sbjct: 59 DTRVIKARLFGVK-----ETGGKIEALVERILDPRTVHAQVRASKSPPPGTRIRL----- 108
Query: 123 QSRLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
E TV +++ GE L F L Q G++PLPPYI + DA D YQ
Sbjct: 109 ADAFEVTVGERF--GEFYTLHFPEDAFALLEQY---GSLPLPPYIDHE--ADAYDETRYQ 161
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YAK G+VAAPTAGLHF LL +L + G++ FVTLHVGAGTF PV+VED H MH
Sbjct: 162 TVYAKEPGAVAAPTAGLHFDQALLEQLAARGVQQAFVTLHVGAGTFQPVRVEDLSQHKMH 221
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
SE I T +A+ + K+ G R+++VGTTS+R LE+ ++ G + S T +FITPGY
Sbjct: 222 SEWYTIPPETVEAVRAAKAAGRRVIAVGTTSMRALESG-SQSGALKAGSDDTQLFITPGY 280
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
F+ VD L++NFHLPKSTLLMLVSAF G E + Y HAI+ YRF+SYGD LL
Sbjct: 281 TFKTVDQLVTNFHLPKSTLLMLVSAFAGYELIRAAYAHAIAQKYRFFSYGDAMLL 335
>gi|166711669|ref|ZP_02242876.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
oryzae pv. oryzicola BLS256]
Length = 367
Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 153/360 (42%), Positives = 216/360 (60%), Gaps = 22/360 (6%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+F +DLP IA P+ R ++RL+VV P+ P ++D V DLP L D ++FN+T
Sbjct: 16 DFHYDLPEELIAQAPLAERAASRLLVVPPS---PQALADRQVRDLPELLQPGDLLIFNDT 72
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQS 124
+VI A+L G + R E I L R + V SK K G ++ GQ
Sbjct: 73 RVIPARLFGQK-ASGGRVEILIERLLGERQA----RVQIGASKSPKAGSLIAL-DAGGQ- 125
Query: 125 RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTY 184
A V+ + + LL F I LE + G +PLPPYI R+ ++ R+ YQT +
Sbjct: 126 ---AEVLGR-DGAFYLLRFEIP-TPLEHWLLAAGRLPLPPYIRREPGVEDRER--YQTVF 178
Query: 185 AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEI 244
A+ G+VAAPTAGLHF LL+RL G++ VTLHVGAGTF PV+V+ D H+MH E
Sbjct: 179 AREVGAVAAPTAGLHFDEALLARLRERGVEFGHVTLHVGAGTFQPVRVDKLDQHVMHKEW 238
Query: 245 GFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTE---DGIINPWSGFTNIFITP 299
+ A + + ++RGGR+++VGTT +R LE+A TT+ +G + P++G T IFI P
Sbjct: 239 LNVGAALVEQVRRTRARGGRVIAVGTTVVRSLESAWRTTDAAPEGELQPFAGETQIFILP 298
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GYR R+VD +++NFHLP+STL+M+VSAF G E + Y HAI+ YRF+SYGD LL+ +
Sbjct: 299 GYRIRSVDAMVTNFHLPESTLMMMVSAFAGRERIFESYHHAIAQRYRFFSYGDAMLLWSR 358
>gi|138896156|ref|YP_001126609.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Geobacillus
thermodenitrificans NG80-2]
gi|166216723|sp|A4IRB0|QUEA_GEOTN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|134267669|gb|ABO67864.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase [Geobacillus
thermodenitrificans NG80-2]
Length = 342
Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 148/357 (41%), Positives = 205/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF LP IA P+ R ++RLMV+ I ++ ++L+ D +V
Sbjct: 1 MKVDLFDFHLPEELIAQTPLPDRAASRLMVLDKQTGA---IRHETFRNIISYLHPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L ++ + W +P K ++ G L F
Sbjct: 58 LNDTRVMPARLYGEK----AETGGMVEVLLLKQLDGDRWETLVKPGKRVRPGTKLVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L+A +D G +L FS G+ + ++ +G +PLPPYI K R Y
Sbjct: 111 -GGGKLQAVCLDTLEHGGRVLEFSYEGL-FYQVLAELGEMPLPPYIKEKLDNPER----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GS AAPTAGLHFT LL + GI + F+TLHVG GTF PV+V+D + H M
Sbjct: 165 QTVYAREIGSAAAPTAGLHFTEELLDAIREKGIHIAFITLHVGLGTFRPVQVDDIEKHNM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN V++ GGRI++VGTTS R LET A DG SG+T+IFI P
Sbjct: 225 HAEFYQMSEETAAILNRVRANGGRIIAVGTTSTRTLETIANRHDGRFAAESGWTDIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF G E Y+ A+ YRF+S+GD L+
Sbjct: 285 GYEFKAIDGLVTNFHLPKSTLIMLVSAFAGREHILHAYEVAVKEQYRFFSFGDAMLI 341
>gi|297529248|ref|YP_003670523.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Geobacillus
sp. C56-T3]
gi|297252500|gb|ADI25946.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Geobacillus
sp. C56-T3]
Length = 342
Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 150/362 (41%), Positives = 205/362 (56%), Gaps = 27/362 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF LP IA P+ R ++RLMV+ I ++ ++LN D +V
Sbjct: 1 MKVDLFDFHLPEELIAQTPLPDRAASRLMVLDKRTGA---IRHETFRNIISYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKE-----ISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
N+T+V+ A+L G EKE + L ++ + W +P K +K G L
Sbjct: 58 LNDTRVMPARLYG---------EKEETGGTVEVLLLKQLDGDRWETLVKPGKRVKPGTKL 108
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
F G +LEA +D G +L FS G+ E ++ +G +PLPPYI K R
Sbjct: 109 TF----GGGKLEAVCLDTLEHGGRVLEFSYDGLFYE-VLAELGEMPLPPYIKEKLDDPER 163
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
YQT YA+ GS AAPTAGLHFT LL + G+ + F+TLHVG GTF PV+V++
Sbjct: 164 ----YQTVYAREIGSAAAPTAGLHFTEELLDAIREKGVHIVFITLHVGLGTFRPVQVDEV 219
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTN 294
+ H MH+E + TA+ LN V+ +GGRI++VGTTS R LET A +G SG+T+
Sbjct: 220 EKHDMHAEFYQMSEETAETLNRVREQGGRIIAVGTTSTRTLETIAGKHNGRFVAESGWTD 279
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PGY F+ +D L++NFHLPKSTL+MLVSA G E YQ + YRF+S+GD
Sbjct: 280 IFIYPGYEFKGIDGLVTNFHLPKSTLIMLVSALAGRENILHAYQVGVKERYRFFSFGDAM 339
Query: 355 LL 356
L+
Sbjct: 340 LI 341
>gi|169333983|ref|ZP_02861176.1| hypothetical protein ANASTE_00375 [Anaerofustis stercorihominis DSM
17244]
gi|169258700|gb|EDS72666.1| hypothetical protein ANASTE_00375 [Anaerofustis stercorihominis DSM
17244]
Length = 340
Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 145/357 (40%), Positives = 206/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD++LP IA P+ RD++RLMVV + I DL +LN D +V
Sbjct: 1 MKTSDFDYNLPEELIAQTPIEKRDTSRLMVVDRDTKK---IKHKHFYDLIEYLNEGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N++KV A+L GV+ +I + ++ N + V +P+K +K G ++ F
Sbjct: 58 LNDSKVFHARLYGVK----EETGAKIETFVLKPLADNMFEVMIKPAKRLKVGSVVKF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L V++K+ G + F ++ I +GT+PLPPYI K D R Y
Sbjct: 111 --DENLSMEVLEKYEEGLAKVRF-FGCSDVFSYIDKIGTVPLPPYIKEKLDDDER----Y 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT+ LL ++ GI + +VTLHVG GTF PVK ++ +H M
Sbjct: 164 QTVYSKDKGSAAAPTAGLHFTNELLEKIKQKGINICYVTLHVGLGTFRPVKEDEITNHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I TA+ +N K G I +VGTT++R LE+ + G I + TNIFI PG
Sbjct: 224 HSEFFIISNDTAKMINETKKNGKDIYAVGTTTVRTLESCYQKYGDIRATNMDTNIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+A+D L++NFHLPKSTLLML+SAF ++ K Y+ AI YRF+S+GD L+
Sbjct: 284 FEFKAIDHLITNFHLPKSTLLMLISAFYNKDDILKAYKEAIKERYRFFSFGDAMLIL 340
>gi|254497614|ref|ZP_05110399.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Legionella
drancourtii LLAP12]
gi|254353163|gb|EET11913.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Legionella
drancourtii LLAP12]
Length = 338
Score = 255 bits (652), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 148/357 (41%), Positives = 213/357 (59%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F FDLP IA P+ R +RL+ + ++ H D+ FL D +V
Sbjct: 1 MNKQDFYFDLPSELIAQYPLANRSDSRLLTYNRHIG---EYGHHQFRDIADFLKPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N++KVI A+L G + ++ + ++ + + SK +K G ++ + Q
Sbjct: 58 MNDSKVIPARLYGHK-----ATGGKVELLVERITGEFTFLAHIKASKALKAGALI-YLEQ 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D Q LE V+++ + L S I++ + + VG +PLPPYI R + D Y
Sbjct: 112 DRQ--LE--VLERHDD----LFVCKSNIDVLQLLHGVGHMPLPPYITRSDEVMDED--RY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GSVAAPTAGLHF +L+ L + G+ + VTLHVGAGTF PV+ E+ +H M
Sbjct: 162 QTVYAKYEGSVAAPTAGLHFDEAVLASLHARGVDIAHVTLHVGAGTFRPVRCENIKEHKM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+++ K+ G R+++VGTT+LR LE+A E G++ P S TNIFI PG
Sbjct: 222 HSEHFTLNPELCSAVHATKAAGNRVIAVGTTALRSLESAAQEGGVLTPCSRDTNIFIYPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ D LM+NFHLP+STLLMLVSAF G +E +YQ AI+ YRF+SYGDTSLL
Sbjct: 282 YKFKICDGLMTNFHLPESTLLMLVSAFIGYKEAMMLYQEAIAKGYRFFSYGDTSLLL 338
>gi|163857959|ref|YP_001632257.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bordetella
petrii DSM 12804]
gi|163261687|emb|CAP43989.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bordetella
petrii]
Length = 353
Score = 255 bits (652), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 144/357 (40%), Positives = 203/357 (56%), Gaps = 27/357 (7%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FD+ LPP IA P R +RL+ +L D DL L + D +VFN
Sbjct: 8 LSDFDYALPPELIAQTPAAQRGGSRLL----HLDGAGAPHDRRFPDLAGLLRAGDLLVFN 63
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+VI A+L G + ++ + P+ + R SK G L
Sbjct: 64 DTRVIKARLTGHKAS-----GGKVEVLVERITEPDRALAHVRASKSPGPGTTLRL----- 113
Query: 123 QSRLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ATV+ + GE+ L F ++L + G PLPPYI DA D YQ
Sbjct: 114 ADAFDATVLGR--AGELFDLRFPAPVLDL---LDAHGATPLPPYITHA--ADATDEARYQ 166
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YA+ G+VAAPTAGLHF +L RL ++G++ FVTLHVGAGTF PV+V++ DH+MH
Sbjct: 167 TVYAREPGAVAAPTAGLHFDEAMLERLAALGVERAFVTLHVGAGTFQPVRVDNLADHVMH 226
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-----GIINPWSGFTNIF 296
+E + P A+ ++RGGR+++VGTTS+R LE+A ++ + P G T +F
Sbjct: 227 AEWYTVGQPVIDAIARARTRGGRVIAVGTTSVRALESAAAQNPHGPQAPLAPLQGDTRLF 286
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
ITPGYR+R VD L++NFHLP+STLLMLVSA G+E ++ Y HA++ YRF+SYGD
Sbjct: 287 ITPGYRYRVVDALVTNFHLPQSTLLMLVSALAGMEPIRRAYAHAVAQRYRFFSYGDA 343
>gi|326693303|ref|ZP_08230308.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Leuconostoc
argentinum KCTC 3773]
Length = 353
Score = 255 bits (652), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 146/360 (40%), Positives = 210/360 (58%), Gaps = 15/360 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FD+DLP + IA P+ RD++RL+V+ + D D+ ++ DAIV
Sbjct: 7 QLSDFDYDLPEALIAQTPLKQRDASRLLVLDADTGA---YDDKHFYDILDYVEPGDAIVM 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NN++V+ A+L+G R E + H V W +P+K G + F
Sbjct: 64 NNSRVLPARLHGARPETGGHAEVLLLRQDHGDV----WETLVKPAKKSPIGSTIVFGDDI 119
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ ATV+ + G + F GI +E + +G +PLPPYI K R YQ
Sbjct: 120 NNPIMTATVVGELEHGGRYIEFHYDGIFMEL-LEKLGEMPLPPYIKEKLDDQER----YQ 174
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T Y+K+ GS AAPTAGLH+TS LL ++ + G+K +TLHVG GTF PV+ E+ +DH MH
Sbjct: 175 TVYSKVDGSAAAPTAGLHWTSELLDKVRAKGVKTVELTLHVGLGTFRPVEEENIEDHKMH 234
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPG 300
SE + A LN V + GGRI++ GTTS+R LET ++ DG + SG+T+IFI PG
Sbjct: 235 SEFYQLTQEAADTLNDVHANGGRIIATGTTSIRTLETIGSKFDGHLQADSGWTDIFIKPG 294
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
Y++ VD ++NFHLPKSTL+MLV+AF G + K Y+HA++ YRF+S+GD +F KR
Sbjct: 295 YQWTTVDAFITNFHLPKSTLVMLVAAFTGRDNILKAYEHAVADQYRFFSFGDA--MFVKR 352
>gi|21243247|ref|NP_642829.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
axonopodis pv. citri str. 306]
gi|24212185|sp|Q8PJL6|QUEA_XANAC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|21108780|gb|AAM37365.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
axonopodis pv. citri str. 306]
Length = 356
Score = 255 bits (652), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 154/365 (42%), Positives = 214/365 (58%), Gaps = 24/365 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R ++RL+VV P+ P ++D V DLP L D ++
Sbjct: 1 MKKSDFHYDLPDELIAQAPLAERAASRLLVVPPS---PQALADRQVRDLPELLQPGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + R E I L R + V SK K G ++
Sbjct: 58 FNDTRVIPARLFGQK-ASGGRVEILIERLLGERQA----RVQIGASKSPKAGSLIAL-DA 111
Query: 121 DGQSRLEATVIDKWNTGEI-LLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
GQ A V+ + GE LL F I LE + G +PLPPYI R+ ++ R+
Sbjct: 112 GGQ----AEVLGR--DGEFYLLRFEIP-TPLEHWLLEAGRLPLPPYIRREPGVEDRER-- 162
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A+ G+VAAPTAGLHF LL+RL G++ VTLHVGAGTF PV+V+ D H+
Sbjct: 163 YQTVFAREVGAVAAPTAGLHFDEPLLARLRERGVEFGHVTLHVGAGTFQPVRVDKLDQHV 222
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-----TTEDGIINPWSGFTN 294
MH E + A + + ++RGGR+++VGTT +R LE+A +G + P++G T
Sbjct: 223 MHKEWLNVGAALVEQVRRTRARGGRVIAVGTTVVRSLESAWRKTEAAPEGELQPFAGETQ 282
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PGYR R+VD +++NFHLP+STL+M+VSAF G E Y HAI+ YRF+SYGD
Sbjct: 283 IFILPGYRIRSVDAMVTNFHLPESTLMMMVSAFAGRERIFAAYHHAIAQRYRFFSYGDAM 342
Query: 355 LLFQK 359
LL+ +
Sbjct: 343 LLWGR 347
>gi|225419694|ref|ZP_03761997.1| hypothetical protein CLOSTASPAR_06032 [Clostridium asparagiforme
DSM 15981]
gi|225041658|gb|EEG51904.1| hypothetical protein CLOSTASPAR_06032 [Clostridium asparagiforme
DSM 15981]
Length = 318
Score = 255 bits (652), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 137/316 (43%), Positives = 188/316 (59%), Gaps = 13/316 (4%)
Query: 41 ISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWS 100
++ + D+ +L D +V N+TKVI A+L GV+ +I L R + W
Sbjct: 2 VTHRVFRDIVEYLRPGDCLVINDTKVIPARLMGVK----ADTGAKIEVLLLKRRENDIWE 57
Query: 101 VYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTI 160
+P K K G L F G L TV++ + G L+ F GI E + +G +
Sbjct: 58 TLVKPGKKAKPGTELSF----GDGLLTGTVVETVDDGNRLIQFHYEGI-FEEILDQLGQM 112
Query: 161 PLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTL 220
PLPPYI + +D YQT YAK +GS AAPTAGLHFT+ LL + +G+K+ VTL
Sbjct: 113 PLPPYITHQ----LKDKNRYQTVYAKHEGSAAAPTAGLHFTNELLKEIGDMGVKIAHVTL 168
Query: 221 HVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT 280
HVG GTF PVKVE+ DH MHSE ++ A +N K+ GGR++ VGTTS R +E+A+
Sbjct: 169 HVGLGTFRPVKVENVLDHHMHSEFYVVEESEAAKVNETKAAGGRVICVGTTSCRTVESAS 228
Query: 281 TEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHA 340
TEDG++ +G+T IFI PGYRF+ +D L++NFHLP+STL+MLVSA G E Y+ A
Sbjct: 229 TEDGVLKAGTGWTEIFIYPGYRFKILDALITNFHLPESTLVMLVSALAGREHILAAYEEA 288
Query: 341 ISHAYRFYSYGDTSLL 356
I YRF+S+GD +
Sbjct: 289 IRERYRFFSFGDAMFI 304
>gi|307825676|ref|ZP_07655893.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylobacter tundripaludum SV96]
gi|307733253|gb|EFO04113.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylobacter tundripaludum SV96]
Length = 339
Score = 255 bits (652), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 141/363 (38%), Positives = 213/363 (58%), Gaps = 32/363 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F++ LP + IA +P+ RD++RL+ + N+ I D +D +N D ++
Sbjct: 1 MKKSDFNYQLPDALIAQKPLAERDASRLLCMDRNIGG---IVDRQFTDFIDLINERDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI A+L G + + ++ + + + + R SK K G ++
Sbjct: 58 FNDTKVIPARLFGTK-----QSGGKVEILIERILDEHHAIAHVRASKSSKAGTLIE---- 108
Query: 121 DGQSRLEATVIDKWNTGEIL-LVFSISGIELERQISL------VGTIPLPPYIARKRPID 173
+DK E+L V + +E + SL +G IPLPPYI R+ D
Sbjct: 109 ----------LDKGYCCEVLGRVDDLFQLEFKGDNSLLSILEQIGHIPLPPYITRED--D 156
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT +A+ G+VAAPTAGLHF ++ +L + G++ FVTLHVG+GTF PV+VE
Sbjct: 157 QSDLTRYQTVFAREAGAVAAPTAGLHFDQAMMEKLKARGVQSAFVTLHVGSGTFQPVRVE 216
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
+ +H+MH E + T A+ K+RGGR++++GTT++R LE+A ++ G++ G T
Sbjct: 217 NLSEHLMHKEYFVVLPETVAAVQQAKARGGRVIAIGTTAVRALESA-SKSGLLEAGFGDT 275
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
++FITPGY+FR+VD +++NFHLP+STLLMLVSAF G E Y HAI +YRF+SYGD
Sbjct: 276 DLFITPGYQFRSVDAMLTNFHLPESTLLMLVSAFAGYEHIMNAYSHAIDQSYRFFSYGDA 335
Query: 354 SLL 356
L
Sbjct: 336 MFL 338
>gi|91207335|sp|Q5GZY2|QUEA_XANOR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
Length = 356
Score = 255 bits (652), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 153/364 (42%), Positives = 216/364 (59%), Gaps = 22/364 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R ++RL+VV P+ P ++D DLP L D ++
Sbjct: 1 MKKSDFHYDLPEELIAQAPLAERAASRLLVVPPS---PQALADRRARDLPELLQPGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + R E I L R + V SK K G ++
Sbjct: 58 FNDTRVIPARLFGQK-ASGGRVEILIERLLGERQA----RVQIGASKSPKAGSLIAL-DA 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
GQ A V+ + + LL F I LE + G +PLPPYI R+ ++ R+ Y
Sbjct: 112 GGQ----AEVLGR-DGAFYLLRFEIP-TPLEHWLLEAGRLPLPPYIRREPGVEDRER--Y 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF LL+RL G++ VTLHVGAGTF PV+V+ D H+M
Sbjct: 164 QTVFAREVGAVAAPTAGLHFDEALLARLRERGVEFGHVTLHVGAGTFQPVRVDKLDQHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTE---DGIINPWSGFTNI 295
H E + A + + ++RGGR+++VGTT +R LE+A TT+ +G + P++G T I
Sbjct: 224 HKEWLNVGAALVEQVRRTRARGGRVIAVGTTVVRSLESAWRTTDAAPEGELQPFAGETQI 283
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGYR R+VD +++NFHLP+STL+M+VSAF G E + Y HAI+ YRF+SYGD L
Sbjct: 284 FILPGYRIRSVDAMVTNFHLPESTLMMMVSAFAGRERIFEAYHHAIAQRYRFFSYGDAML 343
Query: 356 LFQK 359
L+ +
Sbjct: 344 LWSR 347
>gi|289450513|ref|YP_003475177.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Clostridiales genomosp. BVAB3 str. UPII9-5]
gi|289185060|gb|ADC91485.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Clostridiales genomosp. BVAB3 str. UPII9-5]
Length = 349
Score = 255 bits (652), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 145/364 (39%), Positives = 211/364 (57%), Gaps = 32/364 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F ++LP IA P RD++RLM+V+P I S++ ++++ D +V
Sbjct: 1 MKTSDFYYELPKELIAQHPTAKRDNSRLMLVNPATQS---IGHTHFSEIINYIDAGDCLV 57
Query: 61 FNNTKVITAQLNGVR--------FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKG 112
NNTKVI A+L GV+ F +NRR + + W V RP + +++G
Sbjct: 58 LNNTKVIPARLLGVKRDTGVHVEFLLLNRR------------ADDEWEVIVRPGRRLRQG 105
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
++ F + L A + + TG ++ F +GI E + GT+PLPPYI K
Sbjct: 106 SVVDFMPGE----LSAEITEVLPTGNRVVKFFFNGI-WEEILDKAGTMPLPPYIKEKLAD 160
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+R Y T YAK GS AAPTAGLHFT LL+ L + G+K+ +VTLHVG GTF PVK
Sbjct: 161 PSR----YNTVYAKYDGSAAAPTAGLHFTPELLAALQAKGVKLAYVTLHVGLGTFRPVKA 216
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
E+ +H MHSE + TAQ +N VK+ G +I++VGTTS R +E+ +G + P +G+
Sbjct: 217 ENIAEHHMHSEYYELPPETAQLINEVKASGHKIIAVGTTSTRTVESVYHNNGKVVPETGW 276
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFI PG++F +D L++NFHLP+STL+MLVSA G + Y A+ YRF+S+GD
Sbjct: 277 TDIFIYPGFKFGVIDGLITNFHLPESTLMMLVSAIAGKDFIFSAYAEAVKEKYRFFSFGD 336
Query: 353 TSLL 356
+
Sbjct: 337 AMFI 340
>gi|160947141|ref|ZP_02094308.1| hypothetical protein PEPMIC_01073 [Parvimonas micra ATCC 33270]
gi|158446275|gb|EDP23270.1| hypothetical protein PEPMIC_01073 [Parvimonas micra ATCC 33270]
Length = 347
Score = 255 bits (651), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 147/356 (41%), Positives = 205/356 (57%), Gaps = 16/356 (4%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+FDF+L S IA P+ R S++L+VV+ + ++ ++ +D +V N+T
Sbjct: 8 DFDFELDESLIAQFPLKDRSSSKLLVVNRE---NFDLEHKNFKNIVDYIKKDDVLVINDT 64
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQS 124
KVI A+L G R +++ I L + N+W +P K +K G + F G
Sbjct: 65 KVIPARLFGAR----PGKDEAIEVLLLKKHDDNTWETLVKPGKKMKIGSKVEF----GNG 116
Query: 125 RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTY 184
+L V+ GE + FS GI E + +GT+PLPPYI K ++ RD YQT Y
Sbjct: 117 KLLGEVVGISEEGERFVKFSYDGI-FEEILDELGTMPLPPYIHEK--LEERDR--YQTVY 171
Query: 185 AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEI 244
AK GS AAPTAGLHFT LL L G+K+ VTLHVG GTF PVKV++ +H MH E
Sbjct: 172 AKHNGSAAAPTAGLHFTDELLKELQEKGVKIARVTLHVGLGTFRPVKVDNVLEHKMHDEY 231
Query: 245 GFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFR 304
I + + +NS K +G RI +VGTTS+R LET + G + G T+IFI PG+ F+
Sbjct: 232 YEISEESVEIINSAKEKGNRIFAVGTTSVRTLETVYKKYGELVACKGNTDIFIYPGFEFK 291
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
VD L++NFHLPKSTL+MLVSAF E Y A + YRF+S+GD L+ +++
Sbjct: 292 VVDCLITNFHLPKSTLIMLVSAFASKEIIMNAYNEATKNKYRFFSFGDAMLIKKEK 347
>gi|229105056|ref|ZP_04235708.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock3-28]
gi|228678366|gb|EEL32591.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock3-28]
Length = 354
Score = 255 bits (651), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 150/353 (42%), Positives = 208/353 (58%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 5 MDINLFDFHLPEELIAQVPLEDRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 62 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI E + +G +PLPPYI K ++ RD Y
Sbjct: 115 -GEGKLKATCTGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRDR--Y 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 169 QTVYAKEIGSAAAPTAGLHFTEELLEKLKKKGVQLAFITLHVGLGTFRPVSADTIEEHHM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT G + SG+T+IF+ P
Sbjct: 229 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHSGKLCAASGWTDIFMYP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 289 GYEFKAIDGLITNFHLPKSTLIMLVSAFSNRDNVLHAYNEAVKEKYRFFSFGD 341
>gi|15604084|ref|NP_220599.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
prowazekii str. Madrid E]
gi|7674179|sp|Q9ZDV6|QUEA_RICPR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|3860775|emb|CAA14676.1| S-ADENOSYLMETHIONINE:tRNA RIBOSYLTRANSFERASE-ISOMERASE (queA)
[Rickettsia prowazekii]
gi|292571808|gb|ADE29723.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase [Rickettsia
prowazekii Rp22]
Length = 383
Score = 255 bits (651), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 148/407 (36%), Positives = 224/407 (55%), Gaps = 73/407 (17%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVS---DLPAFLNSND 57
M + +FDF+LP + IA P RD++ L++ + H+ + ++ +L D
Sbjct: 1 MKLSDFDFNLPSALIAQYPSSERDNSDLLIAG---------TKHIKTKFYNIIDYLKKGD 51
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+VFNN+KVI A+L H+ K I+ L+ ++S N W +A+P++ + GD +F
Sbjct: 52 LLVFNNSKVIKAKL------HLG---KNITINLNKKLSDNCWIAFAKPARKLNIGDEFYF 102
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRP------ 171
+ + + +K GEI + F + I + + + G IPLP YI R P
Sbjct: 103 DTH------KIIITEKLAIGEIKVKFMLDNISIIKFLDKYGEIPLPFYIKRPSPVCYSNM 156
Query: 172 --------------------------------------IDARDYVD-YQTTYAKIQGSVA 192
ID+ + D YQT Y++I+GSVA
Sbjct: 157 ALCCKPENTLKIKSIPHNMSKIVTNNSNTVNLRSNDGIIDSTNDNDRYQTIYSQIEGSVA 216
Query: 193 APTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTA 252
APTAGLHFT N+L +L + G+ FVTLHVGAGTF+PVK E+ +H MH+E I TA
Sbjct: 217 APTAGLHFTKNILDKLKTKGVHTAFVTLHVGAGTFLPVKTENIHEHKMHTEYCSITTETA 276
Query: 253 QALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSN 312
+ +N K G I++VGTT+LR +E+A +GI+ + T+IFITPG+ F+ VD+L++N
Sbjct: 277 EIINKTKQEGRSIIAVGTTTLRTIESA-CNNGIVRAGNFETDIFITPGFNFQVVDMLLTN 335
Query: 313 FHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
FH PKSTL +L+ AF G +E +Y++AI RF+SYGD +LL++K
Sbjct: 336 FHFPKSTLFILICAFAGFKEMHALYKYAIKEKMRFFSYGDATLLYRK 382
>gi|269837349|ref|YP_003319577.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Sphaerobacter thermophilus DSM 20745]
gi|269786612|gb|ACZ38755.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Sphaerobacter thermophilus DSM 20745]
Length = 341
Score = 255 bits (651), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 146/356 (41%), Positives = 211/356 (59%), Gaps = 16/356 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+DLPP IA PV PRD++RLMVV I+ DLP+ L+ D ++ N
Sbjct: 1 MADYDYDLPPELIAQHPVEPRDASRLMVVD---RASETIAHRRFRDLPSLLSPGDLLIVN 57
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+V+ A+L+G R ++ L R+ W RP++ ++ G +H Q G
Sbjct: 58 DTRVMPARLHGRRPTG-----GQVELLLLRRLEDGCWEAMGRPARRLRPGTFVHLRDQGG 112
Query: 123 QSRLE-ATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ +E A V+ + GE LL + E+E ++ G +PLPPYI R R D YQ
Sbjct: 113 REAVEPAEVVAR--RGEGLLAVRLPS-EVEARLDEFGEMPLPPYI-RAR---LEDPERYQ 165
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A GS AAPTAGLHFT LL+ L + GI+ +TLHVG GTF+PVKVED H MH
Sbjct: 166 TVFATEVGSAAAPTAGLHFTPRLLAELDAAGIRRATITLHVGLGTFLPVKVEDARQHRMH 225
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E + A T A+ ++ G R+V+VGTT+ R LE+ + + SG+T++FI PG+
Sbjct: 226 QEWYHVPADTLAAIRETRAAGRRVVAVGTTACRTLESIAPDLDADDDLSGWTDLFIVPGH 285
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F+ VD L++NFHLP+STLL+LVSAF G E + Y+ A+ YRF+S+GD L+
Sbjct: 286 QFQVVDALVTNFHLPRSTLLLLVSAFAGRELILRAYEEAVRTRYRFFSFGDAMLIL 341
>gi|167629905|ref|YP_001680404.1| s-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Heliobacterium modesticaldum Ice1]
gi|238687889|sp|B0TF76|QUEA_HELMI RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|167592645|gb|ABZ84393.1| s-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Heliobacterium modesticaldum Ice1]
Length = 344
Score = 255 bits (651), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 145/359 (40%), Positives = 209/359 (58%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +D++LP IA PV PRD++RLMV+ + + DL L+ D +V
Sbjct: 1 MEVALYDYELPKEAIAQTPVEPRDASRLMVLERRTGA---VDHRIFRDLVHILHPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISC--TLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N T+VI A+L G +R+ +++ L + + W V RP + +K G F
Sbjct: 58 VNRTRVIPARLFG------KKRDSDVTVEIVLLTPMGDDRWEVLVRPGRRLKPG----VF 107
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
G+ RL A +++ + G ++ F SG + + I +G +PLPPYI P ++
Sbjct: 108 VDLGEGRLAAEIVETTDFGGRVVRFHYSG-DFDTLIDEIGQMPLPPYIETALP--RQEAE 164
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y++ +GS AAPTAGLHFT LL L GI++ V LHVG GTF PV+V+ ++H
Sbjct: 165 RYQTVYSQERGSAAAPTAGLHFTPQLLEDLKKRGIEITSVLLHVGLGTFRPVQVDRIEEH 224
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-EDGIINPWSGFTNIFI 297
MHSE +D A+A+ K G R+++VGTT R LETA +G + SG+T+IFI
Sbjct: 225 KMHSEFFQVDPEAARAIAKAKQEGRRVIAVGTTVARTLETAAGLHNGTVAAGSGWTDIFI 284
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY F+ +D L++NFHLP+STLLMLVSAF G E+ Y+ A+ YRF+S+GD L+
Sbjct: 285 YPGYTFQCIDGLITNFHLPRSTLLMLVSAFAGREQVLAAYREALEKGYRFFSFGDAMLI 343
>gi|300868110|ref|ZP_07112745.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Oscillatoria sp. PCC 6506]
gi|300333884|emb|CBN57925.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Oscillatoria sp. PCC 6506]
Length = 369
Score = 255 bits (651), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 150/368 (40%), Positives = 211/368 (57%), Gaps = 24/368 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++ +++ LPP RIA PV PRDS+RL+VV P + +LP FL D +V
Sbjct: 10 LKLEAYNYVLPPERIAQNPVVPRDSSRLLVV----DSPHSHQHSIFRELPNFLKRGDLLV 65
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L N W +P K +K G + F
Sbjct: 66 LNNTRVLPARLKGRK-----PNGYPVEALLMEERERNCWLALVKPGKRLKPGARIEFDPL 120
Query: 121 DGQ----SRLEATVIDK-WNTGEILLVFSIS-GIELERQISLVGTIPLPPYIARKRPIDA 174
+G+ RL ATV+++ TG LL F + G+ L + + G IPLPPYI + +
Sbjct: 121 NGEIPNGDRLSATVLERDEATGGRLLQFEVPVGMSLVQLLPEYGHIPLPPYIKNSQALGE 180
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
+ YQT YA+ G++AAPTAGLHFT LL L GI+ FVTLHVG GTF PV+VED
Sbjct: 181 Q----YQTIYAEKLGAIAAPTAGLHFTDELLKGLQEKGIEQAFVTLHVGVGTFRPVEVED 236
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN-----PW 289
H MH E + A T + ++ GGRI++VGTT++R LE A N +
Sbjct: 237 LTTHQMHREWVEVPAITVDKIRQTQANGGRIIAVGTTAVRALEGAAAAAQKQNLPSLQAF 296
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
G T++FI PGYR++ V+ L++NFHLP+S+LLMLVSA G + ++Y+ AI+H YRFYS
Sbjct: 297 CGHTDLFIYPGYRWQVVEGLITNFHLPQSSLLMLVSAMIGRQRLFELYEEAIAHQYRFYS 356
Query: 350 YGDTSLLF 357
+GD L+
Sbjct: 357 FGDAMLIL 364
>gi|330719270|ref|ZP_08313870.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Leuconostoc
fallax KCTC 3537]
Length = 352
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 143/357 (40%), Positives = 210/357 (58%), Gaps = 13/357 (3%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FD+DLP + IA P+ RD++RL+ ++ + D D+ ++ + DAIV N
Sbjct: 8 LSDFDYDLPEALIAQTPLKQRDASRLLALN---AISGEYEDRHFYDILDYVKAGDAIVMN 64
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
N++V+ A+L+G R E + H V W V +P+K G + F
Sbjct: 65 NSRVLPARLHGARPETGGHAEVLLLRQDHGDV----WEVLMKPAKKSPIGSEVVFGDDMQ 120
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ ATV++ G ++ F GI +E + +G +PLPPYI K R YQT
Sbjct: 121 HPIMTATVLEDLEHGGKMIEFHYDGIFMEL-LDKLGEMPLPPYIKEKLADQER----YQT 175
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
Y+K+ GS AAPTAGLH+T LL ++ + G+K +TLHVG GTF PV+ E+ +DH MHS
Sbjct: 176 VYSKVDGSAAAPTAGLHWTPELLDKVRAKGVKTVELTLHVGLGTFRPVEEENIEDHKMHS 235
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + A AQ LN V+ GGRI++ GTTS+R LET ++ G + SG+T+IFI PGY
Sbjct: 236 EFYQLTADAAQDLNEVRQNGGRIIATGTTSIRTLETIGSKFSGELKADSGWTDIFIKPGY 295
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
++ VD ++NFHLPKSTL+MLV+AF G E Y HA++ YRF+S+GD +++
Sbjct: 296 QWTVVDAFITNFHLPKSTLVMLVAAFTGREHIMNAYHHAVAQQYRFFSFGDAMFIYK 352
>gi|254671005|emb|CBA07772.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis alpha153]
gi|308389957|gb|ADO32277.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Neisseria meningitidis alpha710]
Length = 356
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 152/356 (42%), Positives = 209/356 (58%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P++ + D + DLP ++ + D +V
Sbjct: 11 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPDMP----LQDRVFGDLPDYVEAGDVLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 67 FNNTKVMKARLFGQKDSG-----GRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 119 --EGGIRAVMVGR--EGELFCLRFEGGQTVYELLEQNGHLPLPPYI--ERAADADDDSRY 172
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 173 QTVYAKYQGAVAAPTAGLHFTEELLHRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 232
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + TA A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 233 HSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 292
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF VD L++NFHLPKSTLLMLVSAF G+ + Y++A+ YRF+SYGD +L
Sbjct: 293 YRFNVVDRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGDAMVL 348
>gi|255994149|ref|ZP_05427284.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Eubacterium
saphenum ATCC 49989]
gi|255993817|gb|EEU03906.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Eubacterium
saphenum ATCC 49989]
Length = 365
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 152/365 (41%), Positives = 201/365 (55%), Gaps = 22/365 (6%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+F++DLPP +IA PV RD ++LMVV IS D+ +LN D +V N T
Sbjct: 9 DFNYDLPPQKIASYPVSKRDESKLMVVKRRSFESPEISHAKFLDIIDYLNEGDCLVINQT 68
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQS 124
KVI A RF I L + N + +P+K + +G I+ +D ++
Sbjct: 69 KVIKA-----RFIGFKDTGARIEVLLLKPLGENLFEAMIKPAKRVSEGTIISVLPKDDET 123
Query: 125 RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTY 184
+ + +I+ I + I G IPLPPYI R+ + D YQT Y
Sbjct: 124 GEPLKIQVVKSDDDIIKQVRILNADSLDYIEEFGKIPLPPYIEREAEL--SDEKRYQTVY 181
Query: 185 AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEI 244
+KI+GSVAAPTAGLHFT L+S++ + GIKV + LHVG GTF PV +D DHIMHSE
Sbjct: 182 SKIKGSVAAPTAGLHFTEELISKIQNKGIKVARILLHVGVGTFRPVNCDDISDHIMHSEY 241
Query: 245 GFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-------------TTEDGIINPWSG 291
I A +NS K+ GGR++ VGTTS+R LE A T D + SG
Sbjct: 242 FEIPEEAADIINSTKNSGGRVICVGTTSVRTLEGAKCIQNASSDASGHKTSD--LKVCSG 299
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
TNIFI PGY F+ D +++NFHLPKSTLLMLVSAF G++ T Y A+ YRF+SYG
Sbjct: 300 ETNIFIYPGYEFKLTDGIITNFHLPKSTLLMLVSAFLGLDNTLNAYDIALKSDYRFFSYG 359
Query: 352 DTSLL 356
D L+
Sbjct: 360 DAMLI 364
>gi|51473411|ref|YP_067168.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
typhi str. Wilmington]
gi|81610818|sp|Q68XF6|QUEA_RICTY RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|51459723|gb|AAU03686.1| S-adenosylmethionine tRNA ribosyltransferase-isomerase [Rickettsia
typhi str. Wilmington]
Length = 375
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 146/399 (36%), Positives = 224/399 (56%), Gaps = 65/399 (16%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVS---DLPAFLNSND 57
M + +FDF++P + IA P RD++ L++ + H+ + ++ +L D
Sbjct: 1 MKLSDFDFNVPNALIAQYPSSERDNSDLLIAG---------TKHIKTKFYNIIDYLKEGD 51
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+VFNN+KVI A+L H+ K I+ L+ ++S N W +A+P++ + GD +F
Sbjct: 52 LLVFNNSKVIKAKL------HLG---KNITINLNKKLSDNCWGAFAKPARKLNIGDEFYF 102
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARK-------- 169
+ + + +K GEI + F ++ I + + + G +PLP YI R
Sbjct: 103 DTH------KIIITEKLAMGEIKVKFILNNISMIKFLDKYGEMPLPFYIKRTSSVCCSNM 156
Query: 170 ------------------------RPIDA-----RDYVDYQTTYAKIQGSVAAPTAGLHF 200
R D+ D YQT Y++I+GSVAAPTAGLHF
Sbjct: 157 ALFCDHDNTLKITSISHNSNTVNFRSTDSMIDSTNDNDRYQTIYSQIEGSVAAPTAGLHF 216
Query: 201 TSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKS 260
T ++L +L + GI FVTLHVGAGTF+PVK E+ H MH+E I A TA+ +N K
Sbjct: 217 TKDILDKLKTKGINTAFVTLHVGAGTFLPVKTENIHKHKMHTEYCSITAETAEIINKTKQ 276
Query: 261 RGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTL 320
+G I++VGTT+LR LE ++ +GI+ + T+IFITPG+ F+ VD+L++NFH PKSTL
Sbjct: 277 KGRDIIAVGTTTLRTLE-SSCNNGIVKAGNFETDIFITPGFNFQIVDMLLTNFHFPKSTL 335
Query: 321 LMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
+L+ AF G +E +Y++AI RF+SYGD +LL++K
Sbjct: 336 FILICAFAGFKEMHALYKYAIKEKMRFFSYGDATLLYRK 374
>gi|207721610|ref|YP_002252049.1| S-adenosylmethionine:trna ribosyltransferase-isomerase [Ralstonia
solanacearum MolK2]
gi|206586771|emb|CAQ17356.1| s-adenosylmethionine:trna ribosyltransferase-isomerase (queuosine
biosynthesis protein quea) [Ralstonia solanacearum
MolK2]
Length = 362
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 151/356 (42%), Positives = 205/356 (57%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FDFDLPP IA + R ++RL+ +H + D +DL +L D +V
Sbjct: 8 LTLSDFDFDLPPELIAQTALPDRTASRLLAMHRDAPG-THFDDRQFADLVDYLRPGDLLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A RF I + + ++ R SK G L
Sbjct: 67 FNDTRVIKA-----RFFGHKASGGRIEVLVERLLDEHTVLAQIRSSKSPVTGSRLLL--- 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ TV + L F +EL I G +PLPPYI + D+ D Y
Sbjct: 119 --ADAFDVTVGPRQEPF-FTLRFPQPALEL---IEQYGRLPLPPYI--EHTPDSFDETRY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF L +RL ++G++ F+TLHVGAGTF PV+VE+ +H M
Sbjct: 171 QTVYARTPGAVAAPTAGLHFDDALFARLDAMGVRRGFLTLHVGAGTFSPVRVENIAEHRM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I A+A+ + ++ GGR+++VGTTS+R LE+A DG + SG T+IFITPG
Sbjct: 231 HSEWYAISPELAEAIRATRAAGGRVIAVGTTSMRALESAAQPDGTLAAGSGETDIFITPG 290
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI+ YRF+SYGD L
Sbjct: 291 YRFRLVDALVTNFHLPKSTLLMLVSAFAGLETIRAAYRHAIAQRYRFFSYGDAMFL 346
>gi|289422359|ref|ZP_06424205.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Peptostreptococcus anaerobius 653-L]
gi|289157194|gb|EFD05813.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Peptostreptococcus anaerobius 653-L]
Length = 340
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 144/353 (40%), Positives = 197/353 (55%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F + LP IA P+ R S+RLMV+ I + D+ +L D +V
Sbjct: 1 MKTSDFKYYLPEELIAQVPIKDRSSSRLMVLDKATG---EIEHRIFKDIIDYLEEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G + R E L ++ W +P K K G + F
Sbjct: 58 LNDTRVIPARLIGEKESSGGRVE-----FLLLKRDGELWETLVKPGKRAKIGSRISF--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L A V+D G ++ F GI E + +G +PLPPYI K R Y
Sbjct: 110 -GGGKLVAEVVDIVEDGSRMVKFIYDGI-FEEVLDELGNMPLPPYITAKLDDKER----Y 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL + S G+ + FVTLHVG GTF PVKV+D + H M
Sbjct: 164 QTVYSKHKGSAAAPTAGLHFTECLLEEIKSKGVDLAFVTLHVGLGTFRPVKVDDVESHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ +N K G RI+ VGTTS R +E+ +EDG ++ +G+T+IFI PG
Sbjct: 224 HSEFYVVSEDAAEKINRAKENGKRIICVGTTSCRTIESVASEDGKMHAKTGWTDIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
Y+F+ VD L++NFHLP+STL+MLVSA E Y+ A+ YRF+S+GD
Sbjct: 284 YKFKVVDNLITNFHLPESTLVMLVSALSKKEYVLSAYEEAVKEKYRFFSFGDA 336
>gi|289665553|ref|ZP_06487134.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
campestris pv. vasculorum NCPPB702]
gi|289667763|ref|ZP_06488838.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
campestris pv. musacearum NCPPB4381]
Length = 356
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 147/372 (39%), Positives = 212/372 (56%), Gaps = 38/372 (10%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F++ LP IA P+ R ++RL+VV P+ P ++D V DLP L D ++
Sbjct: 1 MKKSDFNYSLPEELIAQAPLAERAASRLLVVPPS---PQALADRQVRDLPELLQPGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCH------INR--REKEISCTLHMRVSPNSWSVYARPSKVIKKG 112
FN+T+VI A+L G + I R E+E + SP + S+ A + G
Sbjct: 58 FNDTRVIPARLFGQKASGGRVEILIERLLGEREARVQIGASKSPKAGSLIA-----LDAG 112
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
+DG+ LL F I LE + G +PLPPYI R+ +
Sbjct: 113 GQAEVLGRDGEF--------------YLLRFEIP-TPLEHWLLEAGRLPLPPYIRREPGV 157
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+ R+ YQT +A+ G+VAAPTAGLHF LL++L G++ VTLHVGAGTF PV+V
Sbjct: 158 EDRER--YQTVFAREVGAVAAPTAGLHFDEPLLAQLRERGVEFGHVTLHVGAGTFQPVRV 215
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-----TTEDGIIN 287
+ D H+MH E + A + + ++RGGR+++VGTT +R LE+A +G +
Sbjct: 216 DKLDQHVMHKEWLNVGAALVEQVRRTRARGGRVIAVGTTVVRSLESAWRKTDAAPEGELQ 275
Query: 288 PWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
P++G T IFI PGYR R+VD +++NFHLP+STL+M+VSAF G E + Y HAI+ YRF
Sbjct: 276 PFAGETQIFILPGYRIRSVDAMVTNFHLPESTLMMMVSAFAGRERIFEAYDHAIAQRYRF 335
Query: 348 YSYGDTSLLFQK 359
+SYGD LL+ +
Sbjct: 336 FSYGDAMLLWSR 347
>gi|299065736|emb|CBJ36912.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ralstonia
solanacearum CMR15]
Length = 362
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 152/356 (42%), Positives = 204/356 (57%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FDFDLPP IA + R ++RL+ + + D +DL +L D +V
Sbjct: 8 LTLSDFDFDLPPELIAQTALPDRTASRLLAARRD-AQDTHFDDRQFADLVDYLRPGDLLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A RF I + + ++ R SK G L
Sbjct: 67 FNDTRVIKA-----RFFGHKASGGRIEVLVERLLDEHTVLAQIRSSKSPVAGSTLRL--- 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ TV + L F +EL I G +PLPPYI + D+ D Y
Sbjct: 119 --ADAFDVTVGPRHEPF-FTLRFPQPALEL---IEQYGRLPLPPYI--EHTPDSFDETRY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF L +RL ++G++ F+TLHVGAGTF PV+VE+ +H M
Sbjct: 171 QTVYARTPGAVAAPTAGLHFDDALFARLDAMGVRRGFLTLHVGAGTFSPVRVENIAEHRM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I A+A+ + ++ GGRIV+VGTTS+R LE+A DG + SG T+IFITPG
Sbjct: 231 HSEWYAISPELAEAIRATRAAGGRIVAVGTTSMRALESAAQPDGTLAAGSGETDIFITPG 290
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI+ YRF+SYGD L
Sbjct: 291 YRFRLVDALVTNFHLPKSTLLMLVSAFAGLETIRAAYRHAIAQRYRFFSYGDAMFL 346
>gi|254523176|ref|ZP_05135231.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Stenotrophomonas sp. SKA14]
gi|219720767|gb|EED39292.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Stenotrophomonas sp. SKA14]
Length = 355
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 148/354 (41%), Positives = 206/354 (58%), Gaps = 20/354 (5%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+F++DLP IA P+ R ++RL++V P P +D V DLP+ L D +VFN+T
Sbjct: 17 DFNYDLPAELIAQAPLAERSASRLLLVPP---APAAFTDLQVRDLPSQLQPGDLLVFNDT 73
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQS 124
+VI A+L G + + + + SK K G + +
Sbjct: 74 RVIPARLFGQKASG-----GRVEILIERLLGGQQARAQVGASKSPKAGSRIALDAGG--- 125
Query: 125 RLEATVIDKWNTGEI-LLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTT 183
EA V+ + GE +L F + LE+ + G +PLPPYI R+ +D R+ YQT
Sbjct: 126 --EAEVLGR--DGEFYVLQFHVPE-SLEQWLLHAGRLPLPPYIQREPGVDDRER--YQTV 178
Query: 184 YAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSE 243
+A+ G+VAAPTAGLHF LL+ L G+ VTLHVGAGTF PV+ +D DH+MH E
Sbjct: 179 FAREVGAVAAPTAGLHFDEPLLAALKDKGVDFGHVTLHVGAGTFQPVRADDLKDHVMHRE 238
Query: 244 IGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRF 303
+ A Q + ++ GGR++ VGTT +R LE+A DG + P++G T IFITPGYR
Sbjct: 239 WLNVGAELVQQVRRTRAAGGRVIGVGTTVVRALESA-MRDGELLPFAGETQIFITPGYRI 297
Query: 304 RAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
R+VD +++NFHLP+STLLM++SAF G E + YQHAI YRF+SYGD LLF
Sbjct: 298 RSVDAMVTNFHLPESTLLMMISAFAGKERVFEAYQHAIEQRYRFFSYGDAMLLF 351
>gi|300703083|ref|YP_003744685.1| s-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ralstonia
solanacearum CFBP2957]
gi|299070746|emb|CBJ42041.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ralstonia
solanacearum CFBP2957]
Length = 356
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 151/356 (42%), Positives = 204/356 (57%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FDFDLPP IA + R ++RL+ V D +DL +L D +V
Sbjct: 2 LTLSDFDFDLPPELIAQTALPDRTASRLLAVRRETQG-THFDDRRFADLIDYLRPGDLLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A RF I + + ++ R SK G L
Sbjct: 61 FNDTRVIKA-----RFFGHKASGGRIEVLVERLLDEHTVLAQIRSSKSPVAGSRLRL--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + TV + L F +EL I G +PLPPYI + D+ D Y
Sbjct: 113 --ANAFDVTVGPRQEPF-FTLRFPQPALEL---IEQYGRLPLPPYI--EHTPDSFDETRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF L +RL ++G++ F+TLHVGAGTF PV+VE+ +H M
Sbjct: 165 QTVYARTPGAVAAPTAGLHFDDALFARLDAMGVRRGFLTLHVGAGTFSPVRVENIAEHRM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I A+A+ + ++ GGR+++VGTTS+R LE+A DG + SG T+IFITPG
Sbjct: 225 HSEWYAISPELAEAIRATRAAGGRVIAVGTTSMRALESAAQPDGTLAAGSGETDIFITPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI+ YRF+SYGD L
Sbjct: 285 YRFRLVDALVTNFHLPKSTLLMLVSAFAGLETIRAAYRHAIAQRYRFFSYGDAMFL 340
>gi|17229290|ref|NP_485838.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Nostoc sp.
PCC 7120]
gi|21263876|sp|Q8YW18|QUEA_ANASP RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|17130888|dbj|BAB73497.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Nostoc sp.
PCC 7120]
Length = 397
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 152/370 (41%), Positives = 202/370 (54%), Gaps = 28/370 (7%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLV-SDLPAFLNSNDAIVFNNT 64
+D+ LPP RIA P PRDS+RL+VV+ + H + DLP L D ++ NNT
Sbjct: 30 YDYVLPPERIAQNPAVPRDSSRLLVVNSQTTGKETPPLHQIFRDLPDILRPGDLLIMNNT 89
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF------- 117
KVI A+L G + E+ L N W +P K KKG + F
Sbjct: 90 KVIPARLYGRKSSG-----AEVEILLLEERKFNCWLALVKPGKRFKKGTQIIFEGLGMRN 144
Query: 118 --------FSQDGQSRLEATVI--DKWNTGEILLVFSISGIELERQISLVGTIPLPPYIA 167
+S +L ATV+ DK G +L G L + + G IPLPPYI
Sbjct: 145 LGIENSPQYSVASPHQLTATVLETDKATGGRLLQFDLPEGQSLVQLLDKFGEIPLPPYIT 204
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
+ D + YQT YA+ G++AAPTAGLHFT LL +L I F+TLHVG GTF
Sbjct: 205 TSQAADEQ----YQTVYAEEPGAIAAPTAGLHFTPELLQKLRDRNINQAFITLHVGVGTF 260
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN 287
PV+VED H MH E + A T + + K+ GGRI++VGTT +R LE A G +
Sbjct: 261 RPVEVEDVATHQMHEEWIEVPAATVAQIKATKAAGGRIIAVGTTVVRALEGAAA-SGNLQ 319
Query: 288 PWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
+ G TN+FI PGY+++ V+ L++NFHLP+S+LLMLVSA G E +YQ AI+ YRF
Sbjct: 320 EFCGKTNLFIYPGYKWQVVEGLITNFHLPRSSLLMLVSALIGRERLLNIYQEAIASQYRF 379
Query: 348 YSYGDTSLLF 357
YS+GD L+
Sbjct: 380 YSFGDAMLIL 389
>gi|21263869|sp|Q8XVW5|QUEA_RALSO RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
Length = 356
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 152/356 (42%), Positives = 204/356 (57%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FDFDLPP IA + R ++RL+ + D +DL +L D +V
Sbjct: 2 LTLSDFDFDLPPELIAQTALPDRTASRLLAARHDAQG-THFDDRQFADLVDYLRPGDLLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A RF +I + + ++ R SK G L
Sbjct: 61 FNDTRVIKA-----RFFGHKASGGKIEVLVERLLDEHTVLAQIRSSKSPVAGSTLRL--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ TV + L F +EL I G +PLPPYI + D+ D Y
Sbjct: 113 --ADAFDVTVGPRHEPF-FTLRFPQPALEL---IEQYGRLPLPPYI--EHTPDSFDETRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF L +RL ++G++ F+TLHVGAGTF PV+VE+ +H M
Sbjct: 165 QTVYARTPGAVAAPTAGLHFDDALFARLDAMGVRRGFLTLHVGAGTFSPVRVENIAEHRM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I A+A+ + ++ GGRIV+VGTTS+R LE+A DG + SG T+IFITPG
Sbjct: 225 HSEWYAISPDLAEAIRATRAVGGRIVAVGTTSMRALESAAQPDGTLAAGSGETDIFITPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI+ YRF+SYGD L
Sbjct: 285 YRFRLVDALVTNFHLPKSTLLMLVSAFAGLETIRAAYRHAIAQRYRFFSYGDAMFL 340
>gi|323142292|ref|ZP_08077124.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Phascolarctobacterium sp. YIT 12067]
gi|322413176|gb|EFY04063.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Phascolarctobacterium sp. YIT 12067]
Length = 342
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 146/356 (41%), Positives = 201/356 (56%), Gaps = 19/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +FD+DLP IA P+ PRD +RL+VV I DL +L D +V
Sbjct: 1 MLVTDFDYDLPQELIAQHPMEPRDHSRLLVVDKKTG---EIEHKHFYDLVNYLKPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L+G + + + L R W V RP K ++ G ++F
Sbjct: 58 FNDTRVIPARLHGTKDTGAH-----VEVFLLTRRDATDWEVLVRPGKKLQVGAKINF--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L VI+ + G ++ F GI E + +G PLPPYI P++ ++ Y
Sbjct: 110 --SDELSCEVIEHTDFGGRVVRFKYDGI-FEEILDRLGETPLPPYITA--PLEDKER--Y 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + +GS AAPTAGLHFT LL ++ IG + FVTLHVG GTF PV +DH M
Sbjct: 163 QTVYNRERGSAAAPTAGLHFTKELLQKIKEIGCEEVFVTLHVGLGTFRPVSEAKIEDHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A A+N K+ G RI++VGTT++R LE A DG ++ S +TNIFI PG
Sbjct: 223 HKEFYTVSQEAADAVNKAKAEGRRIIAVGTTAVRTLEAAGA-DGQLHAGSSWTNIFIYPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+FR VD L++NFHLP+STLLMLVS E + Y+ A+ YRF+S+GD +
Sbjct: 282 YKFRLVDDLVTNFHLPQSTLLMLVSTLSTREIMLQTYKKAVEEKYRFFSFGDAMFI 337
>gi|210616166|ref|ZP_03290969.1| hypothetical protein CLONEX_03188 [Clostridium nexile DSM 1787]
gi|210149928|gb|EEA80937.1| hypothetical protein CLONEX_03188 [Clostridium nexile DSM 1787]
Length = 353
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 142/356 (39%), Positives = 199/356 (55%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F FDLP IA P+ R S+RL+V+ + H+ ++ +L D +V
Sbjct: 13 MRKEDFYFDLPEELIAQDPLEDRSSSRLLVLDKETG---KVEHHVFREIIDYLQEGDCLV 69
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + + +I L R + W +P K K G + F
Sbjct: 70 INDTKVIPARLIGSKIG----TDAKIEVLLLKRKENDVWETLVKPGKKAKVGTRISF--- 122
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L V+D G L+ F GI E + +G +PLPPYI + D Y
Sbjct: 123 -GDGLLVGEVVDIVEEGNRLIHFEYEGI-FEEILDQLGQMPLPPYITHQ----LEDKNRY 176
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + G+++ VTLHVG GTF PVKV++ +H M
Sbjct: 177 QTVYAKHSGSAAAPTAGLHFTPELLKEIEEKGVQIARVTLHVGLGTFRPVKVDNILEHHM 236
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ID A+ +N K G R++ VGTTS R +E+A ++G ++ +G+T IFI PG
Sbjct: 237 HSEFYQIDEEAAEKINRAKESGHRVICVGTTSCRTIESAADKNGKLHATNGWTEIFIYPG 296
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+ +D L++NFHLP+STL+MLVSA G E+ Y+ A+ YRF+S+GD +
Sbjct: 297 YEFKVLDCLITNFHLPESTLVMLVSALAGREQVLSAYEEAVKEKYRFFSFGDAMFI 352
>gi|121634226|ref|YP_974471.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis FAM18]
gi|120865932|emb|CAM09669.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Neisseria meningitidis FAM18]
Length = 359
Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 152/356 (42%), Positives = 208/356 (58%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P++ + D + DLP ++ + D +V
Sbjct: 14 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPDMP----LQDRVFGDLPDYVEAGDVLV 69
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 70 FNNTKVMKARLFGQKDSG-----GRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 121
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A + + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 122 --EGGIRAVTVGR--EGELFCLRFEGGQTVYELLEQNGHLPLPPYI--ERAADADDDSRY 175
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 176 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 235
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + TA A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 236 HSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 295
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF VD L++NFHLPKSTLLMLVSAF G+ + Y++A+ YRF+SYGD +L
Sbjct: 296 YRFNVVDRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGDAMVL 351
>gi|222151525|ref|YP_002560681.1| S-adenosylmethionine tRNA ribosyltransferase [Macrococcus
caseolyticus JCSC5402]
gi|254764282|sp|B9E717|QUEA_MACCJ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|222120650|dbj|BAH17985.1| S-adenosylmethionine tRNA ribosyltransferase [Macrococcus
caseolyticus JCSC5402]
Length = 340
Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 141/357 (39%), Positives = 208/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V EFDF+LP S IA P+ R ++RL+ ++ + I + +LN+ D +V
Sbjct: 1 MDVNEFDFNLPESLIAQTPLQDRTASRLLTLNKHTGE---IKHTNFKSIIDYLNTGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L GV+ + E L + N W V +P+K + G + F
Sbjct: 58 LNDTKVMPARLFGVKEDTGAKIE-----MLMLTEHDNGWEVLIKPAKRVTIGTRISF--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ ++ A +++ + G ++ + GI L+ ++ +G +PLPPYI +R Y
Sbjct: 110 -GEGKIVAICVEELDQGGRIMQLNYEGI-LQERLDELGLMPLPPYIKETLEDQSR----Y 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GS AAPTAGLHFT +LL + + GI + ++TLHVG GTF PV V+D + H M
Sbjct: 164 QTVYARATGSAAAPTAGLHFTESLLEDIKAKGINIAYITLHVGLGTFRPVSVDDVESHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA+ LN + G RI++VGTTS R LET + G SG+T+IFI PG
Sbjct: 224 HSEYYEMSEETAKLLNDTRDSGNRIITVGTTSTRTLETIADDSGHFTAQSGWTDIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+AVD +++NFHLPKSTL+MLVS+ E Y A++ YRF+S+GD ++
Sbjct: 284 YSFKAVDAMITNFHLPKSTLVMLVSSLATKEFIMNAYNEAVNEKYRFFSFGDAMFIY 340
>gi|320106498|ref|YP_004182088.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Terriglobus
saanensis SP1PR4]
gi|319925019|gb|ADV82094.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Terriglobus
saanensis SP1PR4]
Length = 356
Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 149/368 (40%), Positives = 211/368 (57%), Gaps = 25/368 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLPP IA +P RD+AR++ V + + D DLP L D +V
Sbjct: 1 MRVSDFHFDLPPELIAQKPPVERDAARMLTVDRSTGH---LEDKNFLDLPDLLRKGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREK-----EISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
NN++VI A+L R + +I L W +P + ++ G+ L
Sbjct: 58 LNNSRVIPARLFARRAGLRTQSSSPAPSGQIEVLLTQPFGGGRWRALVKPGRKVQVGERL 117
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISG---IELERQISLVGTIPLPPYIARKRPI 172
F G+ L+A V++ GE L F+ + LER +G +PLPPYI R
Sbjct: 118 VF----GEDELQAEVMETGEFGERTLRFAPNPDFFATLER----IGHMPLPPYIHRAD-- 167
Query: 173 DARDYVDYQTTYA--KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
A D YQT ++ +++GS AAPTAGLHFT L+++ S G++V +TLHVG GTF P+
Sbjct: 168 SAEDRSRYQTVFSDLELKGSAAAPTAGLHFTPETLNKIQSKGVQVQQITLHVGLGTFQPL 227
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED--GIINP 288
+VED + +H E + TA+A+N K+ G R+V+VGTT++R LE ++D + P
Sbjct: 228 RVEDLSEIRLHEEPYTLPESTAEAINRAKAEGRRVVAVGTTTVRTLEHCASQDPGQPLAP 287
Query: 289 WSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
SG T+IF++PGY FR VD L++NFHLP+STLLMLVSAF G E+ Y+HA+ YRF+
Sbjct: 288 HSGTTSIFLSPGYEFRVVDALLTNFHLPQSTLLMLVSAFAGREQVLAAYRHAVESRYRFF 347
Query: 349 SYGDTSLL 356
SYGD L
Sbjct: 348 SYGDCMFL 355
>gi|325141611|gb|EGC64075.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis 961-5945]
gi|325197642|gb|ADY93098.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis G2136]
Length = 346
Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 152/356 (42%), Positives = 208/356 (58%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P++ + D + DLP ++ + D +V
Sbjct: 1 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPDMP----LQDRVFGDLPDYVEAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDSG-----GRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A + + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 109 --EGGIRAVTVGR--EGELFCLRFEGGQTVYELLEQNGHLPLPPYI--ERAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + TA A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 223 HSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF VD L++NFHLPKSTLLMLVSAF G+ + Y++A+ YRF+SYGD +L
Sbjct: 283 YRFNVVDRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGDAMVL 338
>gi|194365392|ref|YP_002028002.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Stenotrophomonas maltophilia R551-3]
gi|226713851|sp|B4SSS0|QUEA_STRM5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|194348196|gb|ACF51319.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Stenotrophomonas maltophilia R551-3]
Length = 343
Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 148/358 (41%), Positives = 208/358 (58%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F+++LP IA P+ R ++RL++V P P +D V DLP+ L D +V
Sbjct: 1 MKKSDFNYNLPAELIAQAPLAERSASRLLLVPP---APDAFTDLQVRDLPSLLQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + SK K G + +
Sbjct: 58 FNDTRVIPARLFGQKASG-----GRVEILIERLLGGQQARAQVGASKSPKAGSRIALDAG 112
Query: 121 DGQSRLEATVIDKWNTGEI-LLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
EA V+ + GE +L F + LE+ + G +PLPPYI R+ +D R+
Sbjct: 113 G-----EAEVLGR--DGEFYVLQFHVPE-SLEQWLLHAGRLPLPPYIQREPGMDDRER-- 162
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A+ G+VAAPTAGLHF LL+ L G+ VTLHVGAGTF PV+ +D DH+
Sbjct: 163 YQTVFAREVGAVAAPTAGLHFDEPLLAALKDKGVDFGHVTLHVGAGTFQPVRADDLKDHV 222
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH E + A Q + ++ GGR++ VGTT +R LE+A DG + P++G T IFITP
Sbjct: 223 MHREWLNVGAELVQQVRRTRAAGGRVIGVGTTVVRALESA-MRDGELLPFAGETQIFITP 281
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GYR R+VD +++NFHLP+STLLM++SAF G E + YQHAI+ YRF+SYGD LLF
Sbjct: 282 GYRIRSVDAMVTNFHLPESTLLMMISAFAGKERVFEAYQHAIAQRYRFFSYGDAMLLF 339
>gi|84624010|ref|YP_451382.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
oryzae pv. oryzae MAFF 311018]
gi|188576285|ref|YP_001913214.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
oryzae pv. oryzae PXO99A]
gi|84367950|dbj|BAE69108.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
oryzae pv. oryzae MAFF 311018]
gi|188520737|gb|ACD58682.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
oryzae pv. oryzae PXO99A]
Length = 367
Score = 254 bits (649), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 152/360 (42%), Positives = 215/360 (59%), Gaps = 22/360 (6%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+F +DLP IA P+ R ++RL+VV P+ P ++D DLP L D ++FN+T
Sbjct: 16 DFHYDLPEELIAQAPLAERAASRLLVVPPS---PQALADRRARDLPELLQPGDLLIFNDT 72
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQS 124
+VI A+L G + R E I L R + V SK K G ++ GQ
Sbjct: 73 RVIPARLFGQK-ASGGRVEILIERLLGERQA----RVQIGASKSPKAGSLIAL-DAGGQ- 125
Query: 125 RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTY 184
A V+ + + LL F I LE + G +PLPPYI R+ ++ R+ YQT +
Sbjct: 126 ---AEVLGR-DGAFYLLRFEIP-TPLEHWLLEAGRLPLPPYIRREPGVEDRER--YQTVF 178
Query: 185 AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEI 244
A+ G+VAAPTAGLHF LL+RL G++ VTLHVGAGTF PV+V+ D H+MH E
Sbjct: 179 AREVGAVAAPTAGLHFDEALLARLRERGVEFGHVTLHVGAGTFQPVRVDKLDQHVMHKEW 238
Query: 245 GFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTE---DGIINPWSGFTNIFITP 299
+ A + + ++RGGR+++VGTT +R LE+A TT+ +G + P++G T IFI P
Sbjct: 239 LNVGAALVEQVRRTRARGGRVIAVGTTVVRSLESAWRTTDAAPEGELQPFAGETQIFILP 298
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GYR R+VD +++NFHLP+STL+M+VSAF G E + Y HAI+ YRF+SYGD LL+ +
Sbjct: 299 GYRIRSVDAMVTNFHLPESTLMMMVSAFAGRERIFEAYHHAIAQRYRFFSYGDAMLLWSR 358
>gi|325955528|ref|YP_004239188.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Weeksella
virosa DSM 16922]
gi|323438146|gb|ADX68610.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Weeksella
virosa DSM 16922]
Length = 351
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 150/361 (41%), Positives = 202/361 (55%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP +A RP RD ARLMV+H + I L DL + + D ++
Sbjct: 3 MKTSDFDFKLPDELLAERPSEHRDEARLMVIHRDTGK---IEHRLFKDLIEYFDEGDVMI 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + +I L + P + W V P++ I+ G+ L FF
Sbjct: 60 RNNTKVFPARLMGNK----EKTGAKIEVFLLRELDPETRLWDVLVDPARKIRIGNKL-FF 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISL--VGTIPLPPYIARKRPIDARD 176
+D L A V+D + L F G E +I L +G PLP YI KR D D
Sbjct: 115 DED--DTLVAEVVDNTTSRGRTLRFLFDGSYEEFRIKLKEIGDTPLPKYI--KRDADEED 170
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ +LL RL G+ VTLH+G GTFMPV+VED
Sbjct: 171 AERYQTIYAKEEGAVAAPTAGLHFSKHLLKRLEIKGVDFAEVTLHIGLGTFMPVEVEDLS 230
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I +A +N R+ ++GTTS+R +E++ + DG +N ++G+TN F
Sbjct: 231 KHKMESEQVIIPQESADLVNKAIDAKKRVCAIGTTSMRSIESSVSADGHLNAFNGWTNKF 290
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH PKSTLLM++SAF G E K Y AI Y+FYSYGD L+
Sbjct: 291 IYPPYDFSIANCMVTNFHTPKSTLLMMISAFAGHELIMKAYDEAIKEGYKFYSYGDAMLI 350
Query: 357 F 357
Sbjct: 351 L 351
>gi|17547431|ref|NP_520833.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ralstonia
solanacearum GMI1000]
gi|17429734|emb|CAD16419.1| probable s-adenosylmethionine:trna ribosyltransferase-isomerase
(queuosine biosynthesis protein quea) [Ralstonia
solanacearum GMI1000]
Length = 362
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 152/356 (42%), Positives = 204/356 (57%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FDFDLPP IA + R ++RL+ + D +DL +L D +V
Sbjct: 8 LTLSDFDFDLPPELIAQTALPDRTASRLLAARHDAQG-THFDDRQFADLVDYLRPGDLLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A RF +I + + ++ R SK G L
Sbjct: 67 FNDTRVIKA-----RFFGHKASGGKIEVLVERLLDEHTVLAQIRSSKSPVAGSTLRL--- 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ TV + L F +EL I G +PLPPYI + D+ D Y
Sbjct: 119 --ADAFDVTVGPRHEPF-FTLRFPQPALEL---IEQYGRLPLPPYI--EHTPDSFDETRY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF L +RL ++G++ F+TLHVGAGTF PV+VE+ +H M
Sbjct: 171 QTVYARTPGAVAAPTAGLHFDDALFARLDAMGVRRGFLTLHVGAGTFSPVRVENIAEHRM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I A+A+ + ++ GGRIV+VGTTS+R LE+A DG + SG T+IFITPG
Sbjct: 231 HSEWYAISPDLAEAIRATRAVGGRIVAVGTTSMRALESAAQPDGTLAAGSGETDIFITPG 290
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI+ YRF+SYGD L
Sbjct: 291 YRFRLVDALVTNFHLPKSTLLMLVSAFAGLETIRAAYRHAIAQRYRFFSYGDAMFL 346
>gi|254481740|ref|ZP_05094983.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [marine
gamma proteobacterium HTCC2148]
gi|214037869|gb|EEB78533.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [marine
gamma proteobacterium HTCC2148]
Length = 352
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 147/364 (40%), Positives = 217/364 (59%), Gaps = 27/364 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F + LP +A P+ R +RL+ + + ++ +D P L S+D +V
Sbjct: 1 MKRTDFSYHLPEELVAQYPLPERSDSRLLCLDGSDGA---MAHRNFTDFPGLLTSDDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVS----PNSWSVYARPSKVIKKGDILH 116
FNNT+VI A+L G +KE L + + +S + R SK + G +
Sbjct: 58 FNNTRVIPARLWG---------QKETGGKLEILIERVTGTHSALAHIRCSKSPRPGTRIL 108
Query: 117 FFSQDGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
++G S RLE T G + ++ S SG+ L + +G +PLPPYIAR+
Sbjct: 109 LAEREGASPGDYRLEVT----GREGALFMLSSESGLPLTDIMRDIGHMPLPPYIARQD-- 162
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+ D YQT +A+ +G+VAAPTAGLHFT +LL ++ + ++ VTLHVGAGTF PV+
Sbjct: 163 EEADQERYQTVFAEREGAVAAPTAGLHFTDDLLRQIAELDVRTAKVTLHVGAGTFQPVRE 222
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
++ DHIMHSE + A++ ++RGGR+V+VGTT++R LE+A+T G I P+ G
Sbjct: 223 DNILDHIMHSEFVEVGEDVCAAVSDARARGGRVVAVGTTAVRSLESASTT-GEIRPFVGD 281
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFI PGY+FR+VD +++NFHLP+STLLMLVSAF G E Y+ A++ +YRF+SYGD
Sbjct: 282 TDIFIYPGYQFRSVDAMVTNFHLPESTLLMLVSAFAGKEHIMNAYEEAVARSYRFFSYGD 341
Query: 353 TSLL 356
L
Sbjct: 342 AMFL 345
>gi|154505813|ref|ZP_02042551.1| hypothetical protein RUMGNA_03353 [Ruminococcus gnavus ATCC 29149]
gi|153793831|gb|EDN76251.1| hypothetical protein RUMGNA_03353 [Ruminococcus gnavus ATCC 29149]
Length = 341
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 145/357 (40%), Positives = 197/357 (55%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R +RL+ + H+ D+ +LN D +V
Sbjct: 1 MKTSDFYYDLPEELIAQDPLEDRSGSRLLFLDKETG---KTEHHIFRDVIDYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + +I L R + W +P K K G + F
Sbjct: 58 INDTKVIPARLIGEK----EGTGAKIEVLLLKRGENDVWETLVKPGKKAKPGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L V+D G L+ F GI E + +G +PLPPYI + D Y
Sbjct: 111 -GEGLLVGEVVDVVEEGNRLIHFEYKGI-FEEILDQLGQMPLPPYITHQ----LEDRSRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
T YA +GS AAPTAGLHFT LL + G+ + VTLHVG GTF PVKVED +H M
Sbjct: 165 NTVYAAHEGSAAAPTAGLHFTPKLLKEIQEKGVDIARVTLHVGLGTFRPVKVEDVTEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +DA A+ +N K GGR++ VGTTS R +E+A E+G + P SG+T IFI PG
Sbjct: 225 HSEFYMVDAEAAEKINKAKEHGGRVICVGTTSCRTIESAADENGRLKPCSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD ++
Sbjct: 285 YQFKILDGLITNFHLPESTLIMLVSALAGKEHVMAAYEEAVKERYRFFSFGDAMIIL 341
>gi|73748606|ref|YP_307845.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Dehalococcoides sp. CBDB1]
gi|289432632|ref|YP_003462505.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Dehalococcoides sp. GT]
gi|91207422|sp|Q3ZXG6|QUEA_DEHSC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|73660322|emb|CAI82929.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase
[Dehalococcoides sp. CBDB1]
gi|288946352|gb|ADC74049.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Dehalococcoides sp. GT]
Length = 343
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/359 (38%), Positives = 202/359 (56%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD++LP IA +PV PRDS+RL+V++ +++ + ++ + D +V
Sbjct: 1 MKTSDFDYNLPQEYIAQKPVEPRDSSRLLVLNRQSG---ELTNRIFGEITDYFKPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+++V+ A++ G++ +I L R W +P K K G I+ +
Sbjct: 58 MNDSRVLPARIKGIK----QDTSAKIEILLLKRDGEGCWEALLKPGKRTKPGTIIDIHQK 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++A V+ G LL FS E + +G +PLPPYI P+ D Y
Sbjct: 114 GGVVSIQAEVLADKEDGIKLLRFSD-----ETHLMKLGEVPLPPYI--HTPV--ADPERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA GSVAAPTAGLHFT LL RL +G+ +VTLH+G TF PVK ED DH +
Sbjct: 165 QTVYALTNGSVAAPTAGLHFTPELLKRLTEMGVICTYVTLHIGLDTFRPVKEEDPKDHKI 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
H E G + TA A+ K G R+ VGT++ RL+E A+ ++ +I +SG+ ++FI
Sbjct: 225 HREYGILSKETASAICCAKETGKRVFCVGTSATRLVEQASHLSQTSLITSYSGWADLFIL 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+FR D ++NFHLP+ST LML SAF G +K Y+ AIS YRFYS+GD L+
Sbjct: 285 PGYKFRVADCFITNFHLPRSTPLMLTSAFAGWPFLRKAYEKAISEHYRFYSFGDAMLIL 343
>gi|33592191|ref|NP_879835.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bordetella
pertussis Tohama I]
gi|46576956|sp|Q7VZ81|QUEA_BORPE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|33571836|emb|CAE41349.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bordetella
pertussis Tohama I]
Length = 347
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 146/356 (41%), Positives = 204/356 (57%), Gaps = 24/356 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FD+ LPP IA P R +RL+ +L + D DL L +D +V
Sbjct: 5 LTLADFDYHLPPELIAQSPAAERGGSRLL----HLDAASRLHDRRFPDLAGLLRPHDLLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + ++ + +P+ + R SK G L
Sbjct: 61 FNDTRVIKARLTGQKAT-----GGKVEVLVERITAPDRALAHVRASKSPGPGMRLRLAEA 115
Query: 121 DGQSRLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
EA V+ + GE+ L F ++L + G PLPPYI DA D
Sbjct: 116 -----FEAEVLGR--EGELFDLRFPAPVLDL---LDAHGATPLPPYITHA--ADATDERR 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ G+VAAPTAGLHF +L +L + G++ FVTLHVGAGTF PV+V++ +HI
Sbjct: 164 YQTVYAREPGAVAAPTAGLHFDQPMLEQLAAQGVQRAFVTLHVGAGTFQPVRVQNLAEHI 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFI 297
MH+E + T A+ ++ GGRIV+VGTTS+R LE+A +DG + G T +FI
Sbjct: 224 MHAEWYTVPEATVAAIARARAHGGRIVAVGTTSVRALESAAAQAQDGPLAAAQGDTRLFI 283
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
TPGYR+RAVD L++NFHLP+STLLMLVSA G+E ++ Y HA++ YRF+SYGD
Sbjct: 284 TPGYRYRAVDALLTNFHLPQSTLLMLVSALAGVEPIRRAYAHAVAERYRFFSYGDA 339
>gi|316985467|gb|EFV64414.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis H44/76]
gi|325133504|gb|EGC56167.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis M13399]
gi|325200917|gb|ADY96372.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis H44/76]
Length = 346
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 152/356 (42%), Positives = 207/356 (58%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P++ + D + DLP ++ + D +V
Sbjct: 1 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPDMP----LQDRVFGDLPDYVEAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDSG-----GRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A + + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 109 --EGGIRAVTVGR--EGELFCLRFEGGETVYELLEQNGHLPLPPYI--ERAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLHRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + TA A+ + K+RG ++ +VGTTS+R LE+A + G T+IFITPG
Sbjct: 223 HSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATARLKAGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF VD L++NFHLPKSTLLMLVSAF G+ + Y+HA+ YRF+SYGD +L
Sbjct: 283 YRFNVVDRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRHAVEREYRFFSYGDAMVL 338
>gi|188991189|ref|YP_001903199.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
campestris pv. campestris str. B100]
gi|229619925|sp|B0RRR0|QUEA_XANCB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|167732949|emb|CAP51145.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase [Xanthomonas
campestris pv. campestris]
Length = 356
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 152/365 (41%), Positives = 211/365 (57%), Gaps = 24/365 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R ++RL+VV P P SD V DLP L D ++
Sbjct: 1 MKKSDFHYDLPEELIAQAPLAERAASRLLVVPPT---PAAFSDRQVRDLPELLQPGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + SK K G ++
Sbjct: 58 FNDTRVIPARLFGQKASG-----GRVEILIERLLGGQQARAQIGASKSPKAGSVIAL-DA 111
Query: 121 DGQSRLEATVIDKWNTGEI-LLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
GQ A V+ + GE LL F I LE + G +PLPPYI R+ +D R+
Sbjct: 112 GGQ----AEVLGR--DGEFYLLRFDIPA-PLEHWLLDAGRLPLPPYIRREPGLDDRER-- 162
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A+ G+VAAPTAGLHF LL+RL G++ VTLHVGAGTF PV+V+ D H+
Sbjct: 163 YQTVFAREVGAVAAPTAGLHFDEALLARLRERGVEFGHVTLHVGAGTFQPVRVDALDKHV 222
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTED---GIINPWSGFTN 294
MH+E + A + + ++RGGR+++VGTT +R LE+A T+D G + P++G T
Sbjct: 223 MHTEWLNVGAALVEQVRRTRARGGRVIAVGTTVVRSLESAWRKTDDAPHGELQPFAGETQ 282
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PGYR R+VD +++NFHLP+STLLM+VSAF G + Y HAI+ YRF+SYGD
Sbjct: 283 IFILPGYRIRSVDAMVTNFHLPESTLLMMVSAFAGCDRIFAAYAHAIAQRYRFFSYGDAM 342
Query: 355 LLFQK 359
LL+ +
Sbjct: 343 LLWSR 347
>gi|58582108|ref|YP_201124.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
oryzae pv. oryzae KACC10331]
gi|58426702|gb|AAW75739.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
oryzae pv. oryzae KACC10331]
Length = 394
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 152/360 (42%), Positives = 215/360 (59%), Gaps = 22/360 (6%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+F +DLP IA P+ R ++RL+VV P+ P ++D DLP L D ++FN+T
Sbjct: 43 DFHYDLPEELIAQAPLAERAASRLLVVPPS---PQALADRRARDLPELLQPGDLLIFNDT 99
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQS 124
+VI A+L G + R E I L R + V SK K G ++ GQ
Sbjct: 100 RVIPARLFGQK-ASGGRVEILIERLLGERQA----RVQIGASKSPKAGSLIAL-DAGGQ- 152
Query: 125 RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTY 184
A V+ + + LL F I LE + G +PLPPYI R+ ++ R+ YQT +
Sbjct: 153 ---AEVLGR-DGAFYLLRFEIP-TPLEHWLLEAGRLPLPPYIRREPGVEDRER--YQTVF 205
Query: 185 AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEI 244
A+ G+VAAPTAGLHF LL+RL G++ VTLHVGAGTF PV+V+ D H+MH E
Sbjct: 206 AREVGAVAAPTAGLHFDEALLARLRERGVEFGHVTLHVGAGTFQPVRVDKLDQHVMHKEW 265
Query: 245 GFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTE---DGIINPWSGFTNIFITP 299
+ A + + ++RGGR+++VGTT +R LE+A TT+ +G + P++G T IFI P
Sbjct: 266 LNVGAALVEQVRRTRARGGRVIAVGTTVVRSLESAWRTTDAAPEGELQPFAGETQIFILP 325
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GYR R+VD +++NFHLP+STL+M+VSAF G E + Y HAI+ YRF+SYGD LL+ +
Sbjct: 326 GYRIRSVDAMVTNFHLPESTLMMMVSAFAGRERIFEAYHHAIAQRYRFFSYGDAMLLWSR 385
>gi|304440234|ref|ZP_07400124.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Peptoniphilus duerdenii ATCC BAA-1640]
gi|304371283|gb|EFM24899.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Peptoniphilus duerdenii ATCC BAA-1640]
Length = 342
Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 145/352 (41%), Positives = 206/352 (58%), Gaps = 19/352 (5%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+F +DLP IA P+ R S+RL++V+ N + + ++ +LN D +V NN+
Sbjct: 7 DFYYDLPHELIAQHPLKDRASSRLLIVNRNSKD---LEECHFYNIIDYLNEGDVLVVNNS 63
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQS 124
+VI A+L F H +E++I L ++ ++W +P K K G + F
Sbjct: 64 RVIPARL----FGHRKDKEEKIEILL-LKREEDTWQCLVKPGKKAKVGSEIIF-----SD 113
Query: 125 RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTY 184
+L+ V G + F GI E + +G +PLPPYI K D YQT Y
Sbjct: 114 KLKCEVKRVDEEGNRYIKFHCDGI-FEEILDELGNMPLPPYITEK----LEDKERYQTVY 168
Query: 185 AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEI 244
+KI GS AAPTAGLHFT +LL R+ GIKV +TLHVG GTF PVKV+D + H MHSE
Sbjct: 169 SKIDGSAAAPTAGLHFTEDLLDRIKEKGIKVVPITLHVGLGTFRPVKVDDVEKHHMHSEF 228
Query: 245 GFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFR 304
+D TA+ +N K G RI++VGTTS+R LET +G + SG+T+IFI PG+ F+
Sbjct: 229 YMMDKETAKIINDAKENGKRIIAVGTTSMRTLET-IGRNGRVKETSGWTDIFIYPGFEFK 287
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
VD L++NFHLP+STL+MLVSAF + Y++AI + +RF+S+GD +
Sbjct: 288 IVDALITNFHLPESTLMMLVSAFASKDIIFNAYEYAIKNKFRFFSFGDAMFI 339
>gi|171464094|ref|YP_001798207.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Polynucleobacter necessarius subsp. necessarius STIR1]
gi|238692820|sp|B1XRV8|QUEA_POLNS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|171193632|gb|ACB44593.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Polynucleobacter necessarius subsp. necessarius STIR1]
Length = 348
Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 154/363 (42%), Positives = 210/363 (57%), Gaps = 30/363 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F+++LP + IA P+ R +RL+ V + ++ D D+ + + D +V
Sbjct: 1 MQLSDFNYELPAALIAQHPLANRTDSRLLEVKADGLNHALLLDRQFKDILSLVKPGDLLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVS--PNSWSVYARPSKVIKKGDILHFF 118
FNNTKVI A+L+G + I L R+S +W V R SKV+K G I+H
Sbjct: 61 FNNTKVIPARLHG------KKETGGIVELLIERISGEKQTW-VQIRASKVLKTGSIVHIH 113
Query: 119 SQDGQSRLEATVIDKWNTGEILL---VFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
+ G++ + E+ VFS+ LER G +PLPPYI + D
Sbjct: 114 NHAGETFSVEIIGYDGRFYEVSFPDNVFSL----LER----FGELPLPPYIEHQP--DGE 163
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT AK G+VAAPTAGLHF +L ++ ++G+ VTLHVGAGTF PV+ ED
Sbjct: 164 DAQRYQTVVAKNPGAVAAPTAGLHFDEAILQKIKNLGVNQATVTLHVGAGTFTPVREEDL 223
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--ATTEDGIINPWSGFT 293
H MH E I T QA+ + K GGR+++VGTTSLR LE+ A+ + G G T
Sbjct: 224 SKHKMHYEWFSIPNETLQAIEATKENGGRVIAVGTTSLRALESQAASGQSG------GET 277
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
N+FITPGY+F+ VD L++NFHLPKSTLLMLVSAF G++ + YQHAI YRF+SYGD
Sbjct: 278 NLFITPGYQFKTVDCLLTNFHLPKSTLLMLVSAFAGMDHIRAAYQHAIEQKYRFFSYGDA 337
Query: 354 SLL 356
L
Sbjct: 338 MFL 340
>gi|325927082|ref|ZP_08188352.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
perforans 91-118]
gi|325542581|gb|EGD14053.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
perforans 91-118]
Length = 356
Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 148/370 (40%), Positives = 207/370 (55%), Gaps = 38/370 (10%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F ++LP IA P+ R ++RL+VV P P D V DLP L D ++
Sbjct: 1 MKKSDFHYELPEELIAQAPLAERAASRLLVVPP---APAAFGDRQVRDLPELLQPGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCH------INR--REKEISCTLHMRVSPNSWSVYARPSKVIKKG 112
FN+T+VI A+L G + I R E+E + SP + SV A + G
Sbjct: 58 FNDTRVIPARLFGQKASGGRVEILIERLLGEREARVQIGASKSPKAGSVIA-----LDAG 112
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
+DG+ LL F I LE + G +PLPPYI R+ +
Sbjct: 113 GQAEVLGRDGEF--------------YLLRFQIP-TPLEHWLLEAGRLPLPPYIRREPGV 157
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+ R+ YQT +A+ G+VAAPTAGLHF LL+RL G++ VTLHVGAGTF PV+V
Sbjct: 158 EDRER--YQTVFAREVGAVAAPTAGLHFDEPLLARLRERGVEFGHVTLHVGAGTFQPVRV 215
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-----TTEDGIIN 287
+ D H+MH+E + A + + ++RGGR+++VGTT +R LE+A +G +
Sbjct: 216 DKLDQHVMHTEWLNVGAALVEQVRRTRARGGRVIAVGTTVVRSLESAWRKTEAAPEGELQ 275
Query: 288 PWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
P++G T IFI PGYR R+VD +++NFHLP+STL+M+V AF G E Y HAI+ YRF
Sbjct: 276 PFAGETQIFILPGYRIRSVDAMVTNFHLPESTLMMMVCAFAGRERIFAAYHHAIAQRYRF 335
Query: 348 YSYGDTSLLF 357
+SYGD LL+
Sbjct: 336 FSYGDAMLLW 345
>gi|254804318|ref|YP_003082539.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis alpha14]
gi|254667860|emb|CBA03913.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis alpha14]
Length = 356
Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 151/356 (42%), Positives = 208/356 (58%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P++ + D + DLP ++ + D +V
Sbjct: 11 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPDMP----LQDRVFGDLPDYVEAGDVLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 67 FNNTKVMKARLFGQKDSG-----GRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 119 --EGGIRAVMVGR--EGELFCLSFEGGETVYELLEQNGHLPLPPYI--ERAADADDDSRY 172
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 173 QTVYAKYQGAVAAPTAGLHFTEELLHRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 232
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + TA A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 233 HSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 292
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF D L++NFHLPKSTLLMLVSAF G+ + Y++A+ YRF+SYGD +L
Sbjct: 293 YRFNVADRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGDAMVL 348
>gi|283769037|ref|ZP_06341943.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bulleidia
extructa W1219]
gi|283104394|gb|EFC05771.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bulleidia
extructa W1219]
Length = 347
Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 140/352 (39%), Positives = 202/352 (57%), Gaps = 16/352 (4%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+FD++LP IA P+ R ++R+M +H D D+ L D +V NNT
Sbjct: 9 DFDYNLPHELIAQSPLADRSTSRMMWIHKK---SQKYEDKHFYDIVDILKPGDVLVRNNT 65
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQS 124
+VI A+L G++ + L + + W A +KV+K G I+ F DGQ
Sbjct: 66 RVIPARLFGIK----EETGAHVELLLLKQKEHDVWECLAGNAKVVKVGSIVSF--GDGQL 119
Query: 125 RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTY 184
+ + I E+ +++ E+ Q+ G +PLPPYI +K R YQT Y
Sbjct: 120 KAQCLSIGDKGLREMKMLYEGIFTEILDQL---GQVPLPPYIKKKLDDSER----YQTVY 172
Query: 185 AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEI 244
AKI GS AAPTAGLHFT + +L++ GI + VTLHVG GTF P+ VE+ DH+MHSE+
Sbjct: 173 AKIDGSAAAPTAGLHFTKEVDQQLLAKGITITEVTLHVGLGTFRPMDVENVHDHVMHSEV 232
Query: 245 GFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFR 304
+ TA LN K G RIV++GTTS+R LE+ G G T +FI PGY++
Sbjct: 233 YEMSQETADILNQAKKLGRRIVAIGTTSVRTLESVWNRFGQFQECRGETTLFIYPGYQWH 292
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
D++++NFHLPKSTLLM++S+F G E T+++Y HA++ YRF+S+GD L+
Sbjct: 293 TCDVMLTNFHLPKSTLLMMISSFMGYELTQEVYHHAVNEKYRFFSFGDCMLI 344
>gi|120554041|ref|YP_958392.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Marinobacter aquaeolei VT8]
gi|166216731|sp|A1TZN6|QUEA_MARAV RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|120323890|gb|ABM18205.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Marinobacter aquaeolei VT8]
Length = 366
Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 152/362 (41%), Positives = 209/362 (57%), Gaps = 30/362 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHL-VSDLPAFLNSNDAI 59
M V +F FDLP IA P+ R ++RL+ + LS + HL +DLP L D +
Sbjct: 1 MNVSDFHFDLPDELIARYPLKERSASRLLSLD-GLSGQ---TTHLKFTDLPDLLQPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + ++ + + + R SK K+G L
Sbjct: 57 VFNNTRVIPARLFGQKETG-----GKVEILVERLLGEKELLAHTRSSKSPKEGQRL--LL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIE-----LERQISLVGTIPLPPYIARKRPIDA 174
+DG + + L F G E LER +G +PLPPY+ R+ +
Sbjct: 110 EDG------AALRMLARKDALFHFVYEGDEAFLDVLER----IGHMPLPPYMERED--EQ 157
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D YQT YAK G+VAAPTAGLHF +LS L + GI+ +VTLHVGAGTF PV+V+
Sbjct: 158 SDRERYQTVYAKEAGAVAAPTAGLHFDDVVLSALKAKGIEFAYVTLHVGAGTFQPVRVDK 217
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
+DH+MHSEI + T +A+N ++RGGR+V+VGTTS+R LE+A+ G + + G T+
Sbjct: 218 IEDHVMHSEIAHVPEETVKAVNEARARGGRVVAVGTTSVRSLESASRA-GRLQEFRGDTD 276
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PGYRF+ VD +++NFHLP+STL+MLVSAF G Y+ A+ YRF+SYGD
Sbjct: 277 IFIYPGYRFQTVDAMITNFHLPESTLIMLVSAFAGYNNIMSAYREAVEQKYRFFSYGDAM 336
Query: 355 LL 356
L
Sbjct: 337 FL 338
>gi|218438447|ref|YP_002376776.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cyanothece
sp. PCC 7424]
gi|218171175|gb|ACK69908.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Cyanothece
sp. PCC 7424]
Length = 366
Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 161/372 (43%), Positives = 210/372 (56%), Gaps = 33/372 (8%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLV-SDLPAFLNSNDAIV 60
++ +D+ LP IA PV PRDS+RL++V L H V DL +L D +V
Sbjct: 6 LLSSYDYQLPSELIAQTPVVPRDSSRLLIVDS-----LTTYSHSVFRDLGKWLLPGDLLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + + L S W +P K K G + F+S
Sbjct: 61 FNNTRVIPARLYGRKVTG-----SPVEILLLEEKSNLCWLALVKPGKRFKIGSEIEFYSS 115
Query: 121 DGQSR-----LEATVIDK-WNTGEILLVFSI----SGIELERQISLVGTIPLPPYIARKR 170
Q L+A V+++ TG LL F + S EL QI G IP PPYI+
Sbjct: 116 IAQGENQEVVLKAKVLERDETTGGRLLQFELKSDRSFWELLEQI---GEIPFPPYISSS- 171
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
DA+ YQT YA+ G+VAAPTAGLHFT+ LL L+S GI VTLHVG GTF PV
Sbjct: 172 --DAKA-SQYQTVYAQKSGAVAAPTAGLHFTNELLESLLSQGIDQAHVTLHVGVGTFRPV 228
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE----DG-I 285
+VED H+MH+E + T Q + + K+RGGR+++VGTT +R LE A E DG
Sbjct: 229 EVEDITQHLMHTEWVEVPEATVQKIEATKARGGRVIAVGTTVVRSLEGAAKETQPPDGKY 288
Query: 286 INPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAY 345
+ P+ G T++FI PGY + VD L++NFHLPKS+LLMLVSA G E +YQ AI Y
Sbjct: 289 LLPFRGKTDLFIYPGYSWGVVDGLITNFHLPKSSLLMLVSALIGRERLLSLYQVAIEERY 348
Query: 346 RFYSYGDTSLLF 357
RFYS+GD L+
Sbjct: 349 RFYSFGDAMLIL 360
>gi|220907192|ref|YP_002482503.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cyanothece
sp. PCC 7425]
gi|219863803|gb|ACL44142.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Cyanothece
sp. PCC 7425]
Length = 381
Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 150/354 (42%), Positives = 200/354 (56%), Gaps = 20/354 (5%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
+D+ LP + IA PV PRD +RL+VV C L DLP L S D +V NNT+
Sbjct: 30 YDYLLPDALIAQAPVVPRDCSRLLVVQQEDHC-----HRLFQDLPQLLRSGDLLVMNNTR 84
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSR 125
VI A+L G + + E+ L W +P + +K G + F
Sbjct: 85 VIPARLIGSKLG--GQSPLEVEALLLEEKDDRHWLALVKPGRRLKPGSQIQF------GD 136
Query: 126 LEATV--IDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTT 183
L+ATV ID G IL G LE++++ +G IPLPPYI + P Y QT
Sbjct: 137 LQATVLEIDPATRGRILAFDLAEGERLEQRLADLGKIPLPPYI-KDSPAAPEQY---QTV 192
Query: 184 YAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSE 243
Y G+VAAPTAGLHFT LL +L + GI F+TLHVG GTF PV+ + DH MH E
Sbjct: 193 YNDRPGAVAAPTAGLHFTPELLDKLATQGIDHCFLTLHVGVGTFRPVEADHIQDHTMHQE 252
Query: 244 IGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRF 303
I T + + ++ GGRI++VGTT +R LE A E G + P+ G TN+FI PGY++
Sbjct: 253 WLEIPPETVEKIQQTQAAGGRIIAVGTTVVRALEGAAQE-GSLKPFRGKTNLFIYPGYQW 311
Query: 304 RAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
R V+ L++NFHLPKS+L+MLVSA G + +YQ AI+ YRFYS+GD L+
Sbjct: 312 RVVEGLITNFHLPKSSLMMLVSALIGRQRLLDLYQAAIAAQYRFYSFGDAMLIL 365
>gi|22298465|ref|NP_681712.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Thermosynechococcus elongatus BP-1]
gi|46577048|sp|Q8DKD7|QUEA_THEEB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|22294645|dbj|BAC08474.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Thermosynechococcus elongatus BP-1]
Length = 354
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 143/354 (40%), Positives = 205/354 (57%), Gaps = 21/354 (5%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
+D+ LPP RIA +PV PRD +RLMVV + + +DH +LP L D +V N+T+
Sbjct: 12 YDYQLPPERIAQQPVSPRDRSRLMVVTRDTA-----ADHYFYELPQLLAPGDLLVLNDTR 66
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSR 125
VI A+L G + R + L +S W +P + ++ G ++
Sbjct: 67 VIPARLIGQKVGAAGR---TVEVFLLEELSDRQWLALVKPGRKLRPGAVIQI------GP 117
Query: 126 LEATV--IDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTT 183
L+ATV ID+ G ++ G L + +G +PLPPYI P+ D YQT
Sbjct: 118 LQATVQTIDEETRGRVIEFDLPPGDRLWSYLDHLGEVPLPPYI--DHPL--ADTEQYQTV 173
Query: 184 YAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSE 243
YA+ G+VAAPTAGLHFT L S+L GI F+TLHVG GTF PV+ +D H +H E
Sbjct: 174 YARRPGAVAAPTAGLHFTPELFSKLADRGIDHCFLTLHVGIGTFRPVEAKDIRHHHLHEE 233
Query: 244 IGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRF 303
+ A T + + + K+ GGRI++VGTT +R LETA G + P+ G ++++I PGY+
Sbjct: 234 WLEVSAATVERIQAAKAAGGRIIAVGTTVIRALETA-AHSGTLQPFCGKSDLYIYPGYQP 292
Query: 304 RAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ V+ ++NFHLP+S+L+MLVSAF G E ++YQ AI YRFYS+GD L+
Sbjct: 293 KIVEGFITNFHLPRSSLMMLVSAFIGRERLLQLYQQAIDRQYRFYSFGDAMLIL 346
>gi|322382936|ref|ZP_08056768.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase-like protein
[Paenibacillus larvae subsp. larvae B-3650]
gi|321153056|gb|EFX45514.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase-like protein
[Paenibacillus larvae subsp. larvae B-3650]
Length = 364
Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 149/373 (39%), Positives = 210/373 (56%), Gaps = 25/373 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V+ FDF+LP IA P+ R +RLM ++ I H DL +L + D +V
Sbjct: 1 MDVESFDFELPEELIAQTPLSDRTQSRLMTLNKETGE---IGHHTFKDLADYLKAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G++ ++ L + N W RP K IK G L F +Q
Sbjct: 58 LNDTRVIPARLFGLK----KDTGAKVELLLLKDLGDNRWEALVRPGKKIKTGAELVFGTQ 113
Query: 121 DGQSR--LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
L A V ++ G ++ FS GI + +G +PLPPYI K ++ R+
Sbjct: 114 AEADEPVLSAIVEEEGEMGARIVRFSYRGI-FNEILDRLGEMPLPPYI--KEQLNDRE-- 168
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT +AK GS AAPTAGLHFT L L G+++ F+TLHVG GTF PV V+ +DH
Sbjct: 169 RYQTVFAKHAGSAAAPTAGLHFTEEFLEGLRGQGVRIAFITLHVGLGTFRPVSVDRVEDH 228
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-------DG----IIN 287
+H+E + TA+ +N +++GGR+++VGTTS R LETA DG +++
Sbjct: 229 NIHAEYYILSEETARLVNETRAQGGRVIAVGTTSARTLETAAGLSHSQGYIDGEGRTLLH 288
Query: 288 PWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
SG+T+IFI PGY FRAVD L++NFHLPKSTLLMLVSA + Y A+ + YRF
Sbjct: 289 ACSGWTSIFIYPGYEFRAVDGLLTNFHLPKSTLLMLVSALASRKYILHAYAEAVKNRYRF 348
Query: 348 YSYGDTSLLFQKR 360
+S+GD ++ +
Sbjct: 349 FSFGDAMFIYSNQ 361
>gi|158337753|ref|YP_001518929.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acaryochloris marina MBIC11017]
gi|189038509|sp|B0C0B9|QUEA_ACAM1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|158307994|gb|ABW29611.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acaryochloris marina MBIC11017]
Length = 369
Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 146/356 (41%), Positives = 200/356 (56%), Gaps = 13/356 (3%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D+ LP + IA P+ PRD +RL+VV + DL A L D +VFN
Sbjct: 12 LQAYDYLLPETFIAQTPLVPRDRSRLLVVQQQAH-----QHKIFQDLVALLQPGDLLVFN 66
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+VI A+L G + + + + L PN+W RP + +K G + F +
Sbjct: 67 DTRVIPARLLGRKLN--SELAQPVEVFLLEPRQPNTWLALVRPGRRLKPGAQIEFGPPER 124
Query: 123 QS-RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
R E D G I+ S+ E + +G +PLPPYI YQ
Sbjct: 125 PLLRAEILATDADTRGRIIQFESLVEEPFEDLLEQLGEVPLPPYIQES----TAQPEQYQ 180
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YA+ G+VAAPTAGLHFT LL+RL S GI +TLHVG GTF PV+ +D H MH
Sbjct: 181 TVYAQHPGAVAAPTAGLHFTPELLARLQSEGINQAHLTLHVGIGTFRPVETDDILQHHMH 240
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
SE + A T A+ + K+ GGR+++VGTT R LE A ++G + PW G TN+FI P Y
Sbjct: 241 SEWVDLPAATVDAIRTTKASGGRVIAVGTTVTRALEGA-CQNGPLVPWQGRTNLFIYPSY 299
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
++R VD L++NFHLPKS+LLMLVSA G E +Y+ AI+ YRFYS+GD L+
Sbjct: 300 QWRVVDGLITNFHLPKSSLLMLVSALVGRERLLALYEDAIAQQYRFYSFGDAMLVL 355
>gi|190573977|ref|YP_001971822.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Stenotrophomonas maltophilia K279a]
gi|190011899|emb|CAQ45520.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Stenotrophomonas maltophilia K279a]
Length = 355
Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 147/356 (41%), Positives = 207/356 (58%), Gaps = 20/356 (5%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+F +DLP IA P+ R ++RL++V P P +D V DLP+ L D +VFN+T
Sbjct: 17 DFHYDLPAELIAQAPLAERSASRLLLVPP---APDAFTDLQVRDLPSLLQPGDLLVFNDT 73
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQS 124
+VI A+L G + + + + SK K G + +
Sbjct: 74 RVIPARLFGQKASG-----GRVEILIERLLGGQQARAQVGASKSPKAGSRIALDAGG--- 125
Query: 125 RLEATVIDKWNTGEI-LLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTT 183
EA V+ + GE +L F + LE+ + G +PLPPYI R+ +D R+ YQT
Sbjct: 126 --EAEVLGR--DGEFYVLQFHVPE-SLEQWLLHAGRLPLPPYIQREPGVDDRER--YQTV 178
Query: 184 YAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSE 243
+A+ G+VAAPTAGLHF LL+ L G++ VTLHVGAGTF PV+ +D DH+MH E
Sbjct: 179 FAREVGAVAAPTAGLHFDEPLLAALKDKGVEFGHVTLHVGAGTFQPVRADDLKDHVMHRE 238
Query: 244 IGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRF 303
+ A Q + ++ GGR++ VGTT +R LE+A DG + P++G T IFITPGYR
Sbjct: 239 WLNVGAELVQQVRRTRAAGGRVIGVGTTVVRALESA-MRDGELLPFAGETQIFITPGYRI 297
Query: 304 RAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
R+VD +++NFHLP+STLLM++SAF G E + Y+HAI YRF+SYGD LLF +
Sbjct: 298 RSVDAMVTNFHLPESTLLMMISAFAGKERVFEAYRHAIEQRYRFFSYGDAMLLFPQ 353
>gi|78048252|ref|YP_364427.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
campestris pv. vesicatoria str. 85-10]
gi|91207334|sp|Q3BS36|QUEA_XANC5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|78036682|emb|CAJ24373.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase [Xanthomonas
campestris pv. vesicatoria str. 85-10]
Length = 356
Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 148/370 (40%), Positives = 206/370 (55%), Gaps = 38/370 (10%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F ++LP IA P+ R ++RL+VV P P D V DLP L D ++
Sbjct: 1 MKKSDFHYELPEELIAQAPLAERAASRLLVVPP---APAAFGDRQVRDLPELLQPGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCH------INR--REKEISCTLHMRVSPNSWSVYARPSKVIKKG 112
FN+T+VI A+L G + I R E+E + SP + SV A + G
Sbjct: 58 FNDTRVIPARLFGQKASGGRVEILIERLLGEREARVQIGASKSPKAGSVIA-----LDAG 112
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
+DG+ LL F I LE + G +PLPPYI R+ +
Sbjct: 113 GQAEVLGRDGEF--------------YLLRFQIP-TPLEHWLLEAGRLPLPPYIRREPGV 157
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+ R+ YQT +A+ G+VAAPTAGLHF LL+RL G++ VTLHVGAGTF PV+V
Sbjct: 158 EDRER--YQTVFAREVGAVAAPTAGLHFDEPLLARLRERGVEFGHVTLHVGAGTFQPVRV 215
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-----TTEDGIIN 287
+ D H+MH E + A + + ++RGGR+++VGTT +R LE+A +G +
Sbjct: 216 DKLDQHVMHKEWLNVGATLVEQVRRTRARGGRVIAVGTTVVRSLESAWRKTEAAPEGELQ 275
Query: 288 PWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
P++G T IFI PGYR R+VD +++NFHLP+STL+M+V AF G E Y HAI+ YRF
Sbjct: 276 PFAGETQIFILPGYRIRSVDAMVTNFHLPESTLMMMVCAFAGRERIFAAYHHAIAQRYRF 335
Query: 348 YSYGDTSLLF 357
+SYGD LL+
Sbjct: 336 FSYGDAMLLW 345
>gi|167755988|ref|ZP_02428115.1| hypothetical protein CLORAM_01508 [Clostridium ramosum DSM 1402]
gi|237733303|ref|ZP_04563784.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Mollicutes
bacterium D7]
gi|167703980|gb|EDS18559.1| hypothetical protein CLORAM_01508 [Clostridium ramosum DSM 1402]
gi|229383684|gb|EEO33775.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Coprobacillus sp. D7]
Length = 350
Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 147/356 (41%), Positives = 199/356 (55%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EFDF+LP IA P+ RD++RLMV++ N I D+ +L D +V
Sbjct: 10 MKISEFDFNLPEELIAQTPLDKRDTSRLMVLNRNQQT---IEHKHFYDIIDYLKPGDILV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L G++ + L + W ++++K I+ F
Sbjct: 67 RNNTKVIPARLFGIK----EETNGHVEVLLLKDQGNDMWECLVGNARIVKIDTIITF--- 119
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A ++ G + GI E + +GT+PLPPYI K R Y
Sbjct: 120 -GDGLLKAQCVEIKEEGIRVFKMIYEGIFYEI-LDQLGTMPLPPYIKEKLDDQNR----Y 173
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAKI+GS AAPTAGLHFT ++ ++ + GI++ VTLHVG GTF PVKV+D +H M
Sbjct: 174 QTVYAKIEGSAAAPTAGLHFTDEIIEKIKAKGIEILDVTLHVGLGTFRPVKVDDVLEHHM 233
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I+ A LN K G RI++VGTTS R LE + G T+IFI PG
Sbjct: 234 HSEYYMIEPDVADKLNQAKQNGQRIIAVGTTSTRTLEANMKKYGKFTSVHENTDIFIYPG 293
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y++ A+D L++NFHLPKSTLLML+SAF E K YQ AI YRF+S+GD+ +
Sbjct: 294 YKYEAIDCLITNFHLPKSTLLMLISAFASKEFIFKAYQEAIDEKYRFFSFGDSMFI 349
>gi|311108310|ref|YP_003981163.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Achromobacter xylosoxidans A8]
gi|310762999|gb|ADP18448.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Achromobacter xylosoxidans A8]
Length = 352
Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 145/360 (40%), Positives = 209/360 (58%), Gaps = 29/360 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ V +F+++LPP IA P R +RL+ +L + D +DL A L D ++
Sbjct: 5 LTVADFNYELPPELIAQAPAAERTGSRLL----HLDGAGQLHDRQFADLAALLRPQDLLI 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+LNG + +I + P+ + R SK G +L
Sbjct: 61 FNDTRVIKARLNGHKITG-----GKIEVLVERITEPDRVLAHVRASKSPGPGMVLRL--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLV-FSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ATV+ + GE+ + F ++L + G PLPPYI + D D
Sbjct: 113 --ADAFDATVLGR--EGELFDIRFPGPVLDL---LDAHGATPLPPYITHE--ADTGDDER 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ G+VAAPTAGLHF L RL ++G++ FVTLHVGAGTF PV+V++ DH+
Sbjct: 164 YQTVYAREPGAVAAPTAGLHFDQPTLDRLAAMGVERAFVTLHVGAGTFQPVRVDNLADHV 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPW------SGF 292
MH+E + T A+ + +SRGGR+++VGTTS+R LE+A + +G P G
Sbjct: 224 MHAEWFTVPQATVDAIAAARSRGGRVIAVGTTSVRALESAAAQTEGRTAPGLPLAAAQGD 283
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T +FITPGYR+R +D L++NFHLP+STLLMLVSA G+E ++ Y HA++ YRF+SYGD
Sbjct: 284 TRLFITPGYRYRVIDALVTNFHLPQSTLLMLVSALAGVEPIRRAYAHAVAERYRFFSYGD 343
>gi|119508835|ref|ZP_01627987.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Nodularia
spumigena CCY9414]
gi|119466364|gb|EAW47249.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Nodularia
spumigena CCY9414]
Length = 384
Score = 252 bits (644), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 152/361 (42%), Positives = 203/361 (56%), Gaps = 18/361 (4%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVH-PNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+++ LP IA PVFPRDS+RL+VV+ P + DLP L + D ++ N+T
Sbjct: 34 YNYTLPTELIAQNPVFPRDSSRLLVVNSPTTGTQTAPLHQIFRDLPELLRTGDLLIINDT 93
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF-----S 119
KVI A+L G + E+ L N W +P K K G + F S
Sbjct: 94 KVIPARLYGRKSTG-----AEVEVLLLEERQYNCWLALVKPGKRFKPGTKIIFPPRGKDS 148
Query: 120 QDGQSRLEATVID-KWNTGEILLVFSI-SGIELERQISLVGTIPLPPYIARKRPIDARDY 177
Q + L ATVID TG LL F + G L + G IPLPPYI D +
Sbjct: 149 QPLPTELSATVIDTDPATGGRLLRFDVPEGKPLVEVLDQFGEIPLPPYITASTAADEQ-- 206
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YA+ G++AAPTAGLHFT LL +L GI +TLHVG GTF PV++ED
Sbjct: 207 --YQTVYAQQPGAIAAPTAGLHFTPELLKKLGDRGINQASITLHVGIGTFRPVEIEDVTS 264
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH E + T + + + K+ GGRI++VGTT++R LE A + G + + G T++FI
Sbjct: 265 HQMHEEWISVPPATVEQIRATKAAGGRIIAVGTTAVRALEGA-AKSGDLQTFCGKTDLFI 323
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY +R VD L++NFHLP+S+LLMLVSA G E +YQ AI+ YRFYS+GD L+
Sbjct: 324 YPGYEWRVVDGLITNFHLPRSSLLMLVSALIGRERLLSIYQEAIALKYRFYSFGDAMLIL 383
Query: 358 Q 358
+
Sbjct: 384 R 384
>gi|166368637|ref|YP_001660910.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Microcystis
aeruginosa NIES-843]
gi|166091010|dbj|BAG05718.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Microcystis
aeruginosa NIES-843]
Length = 369
Score = 252 bits (644), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 151/365 (41%), Positives = 203/365 (55%), Gaps = 22/365 (6%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D+ LPP IA P RDS+RL+VV S L I DLP +L S D +VF
Sbjct: 10 LLSSYDYHLPPELIAQNPAETRDSSRLLVVDSPNSHNLAI----FRDLPTWLESGDLLVF 65
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+VI A+L G + + L + W +P K K G + F+ +
Sbjct: 66 NDTRVIPARLFGRKTTG-----APVEILLLEEQDDHRWLSLVKPGKRFKVGSEVLFYPKT 120
Query: 122 G----QSRLE-ATVIDK-WNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDA 174
G Q +L A VID+ NTG LL F + G IP PPY+ +
Sbjct: 121 GPTEDQEKLWLAKVIDRDLNTGGRLLQFQRHPRRSFWDMLEEYGHIPFPPYVTESEAEED 180
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
R YQT YA QGSVAAPTAGLHFT L +L GI ++TLHVG GTF PV+VE+
Sbjct: 181 R----YQTVYADKQGSVAAPTAGLHFTPELFHKLAQKGIDTAYITLHVGVGTFRPVEVEN 236
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDG--IINPWSGF 292
+H+MH E I A TA+ + K+RGGR+++VGTT R LE A E + + G
Sbjct: 237 ITEHLMHQEFLQISAETAEKIAQTKARGGRVIAVGTTVARALEGAIKESKSEKLTAFQGK 296
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
TN+F+ PGY++R +D +++NFHLPKS+L+MLVSA G E +YQ AI +RFYS+GD
Sbjct: 297 TNLFVYPGYQWRVIDGMITNFHLPKSSLMMLVSALIGRERLLALYQEAIQEHFRFYSFGD 356
Query: 353 TSLLF 357
L+
Sbjct: 357 AMLIL 361
>gi|323489999|ref|ZP_08095220.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Planococcus
donghaensis MPA1U2]
gi|323396295|gb|EGA89120.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Planococcus
donghaensis MPA1U2]
Length = 359
Score = 252 bits (644), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 144/349 (41%), Positives = 201/349 (57%), Gaps = 17/349 (4%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
++DFDLP IA P+ R S+RL+V++ S D+ +L+ D +V N+T
Sbjct: 14 DYDFDLPEELIAQTPLLDRTSSRLLVMNKESGE---TSHRHFRDITDYLHKGDTLVLNDT 70
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQS 124
+V+ A+L GV+ I L ++ + W +P+K +K G ++ F +G
Sbjct: 71 RVLPARLMGVK----EDTGANIELLLLKQIEDDVWETLVKPAKKVKIGTVVSF--GEGLL 124
Query: 125 RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTY 184
R E T I +++ E+ Q+ G +PLPPYI K D YQT +
Sbjct: 125 RAECTGILDHGGRHFKMIYDGIFYEILDQL---GEMPLPPYIREK----LEDQDRYQTVF 177
Query: 185 AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEI 244
AK +GS AAPTAGLHFT LL ++ + G+ + F+TLHVG GTF PV VE +DH MHSE
Sbjct: 178 AKERGSAAAPTAGLHFTDELLEKIRNKGVNITFITLHVGLGTFRPVSVESIEDHEMHSEF 237
Query: 245 GFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGYRF 303
I +A+ +N K GGRIVSVGTTS R LE+ + DG + SG+T+IFI PGY F
Sbjct: 238 YRITKESAELINETKKNGGRIVSVGTTSTRTLESVAQKFDGKLQEDSGWTDIFIFPGYEF 297
Query: 304 RAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+AVD L++NFHLPKSTL+MLVSA + Y+ A+ YRF+S+GD
Sbjct: 298 KAVDGLITNFHLPKSTLVMLVSALSSRDHILNAYKQAVDERYRFFSFGD 346
>gi|218249064|ref|YP_002374435.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cyanothece
sp. PCC 8801]
gi|218169542|gb|ACK68279.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Cyanothece
sp. PCC 8801]
Length = 372
Score = 252 bits (644), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 155/370 (41%), Positives = 213/370 (57%), Gaps = 29/370 (7%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLV-SDLPAFLNSNDAIV 60
++ +D+ LP IA PV PRDS+RL+V++ L H V +LP +L S D +V
Sbjct: 6 LLASYDYHLPAELIAQSPVTPRDSSRLLVLNS-----LTTQVHSVFRELPQWLRSGDLLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF-FS 119
NNT+VI A+L G + + L +P SW +P K K+G + F S
Sbjct: 61 LNNTRVIPARLYGQKTTG-----APVEILLLEEKAPLSWLALVKPGKRFKRGSQIWFPHS 115
Query: 120 QDGQSR----LEATVID-KWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPID 173
D + L+ATVID TG LL F +E I +G IPLPPY+
Sbjct: 116 PDETTESSVYLKATVIDVDPETGGRLLQFEADSVEAFWSAIEELGKIPLPPYVTSSEAQP 175
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
+ YQT YA+ G+VAAPTAGLHFT +LL RL + GI+ ++TLHVG GTF PV+V
Sbjct: 176 GQ----YQTVYAQKPGAVAAPTAGLHFTPDLLQRLQAQGIQQSYITLHVGVGTFRPVEVG 231
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE------TATTEDGIIN 287
D H MHSE + + T +A+ K+RGGR+++VGTT +R LE A + G+I
Sbjct: 232 DITQHQMHSEWLEVPSSTVEAIAETKARGGRVIAVGTTVVRSLEGVAQIAKAEGKSGLI- 290
Query: 288 PWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
P+ G T++FI PGY ++ V+ +++NFHLP+S+LLMLVSA G E +YQ AI YRF
Sbjct: 291 PFRGRTDLFIYPGYSWQVVEGMITNFHLPRSSLLMLVSALIGRERLMSVYQTAIDEKYRF 350
Query: 348 YSYGDTSLLF 357
YS+GD L+
Sbjct: 351 YSFGDGMLIL 360
>gi|126668566|ref|ZP_01739520.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Marinobacter sp. ELB17]
gi|126626971|gb|EAZ97614.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Marinobacter sp. ELB17]
Length = 369
Score = 252 bits (644), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 150/358 (41%), Positives = 206/358 (57%), Gaps = 28/358 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R ++RL + LS + + +DLP L D +V
Sbjct: 1 MNVSDFRFDLPDELIARYPLSERSASRLFCLD-GLSGDM--NHRRFTDLPDLLQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV----SPNSWSVYARPSKVIKKGDILH 116
FNNTKVI A+L G +KE ++ + V + R SK K G
Sbjct: 58 FNNTKVIPARLFG---------KKETGGSVEILVERITGDQQMLAHVRASKSPKPGQ--Q 106
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDAR 175
+DG T ++ + L G E L + +G +PLPPYI R +A
Sbjct: 107 VLLEDG------TALNVIARADALFELQADGSESLLDILDRLGHMPLPPYI--DRADEAS 158
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT YA+ G+VAAPTAGLHF LL +L ++G+ FVTLHVGAGTF PV+V+
Sbjct: 159 DRERYQTVYAREAGAVAAPTAGLHFDEALLQKLAAMGVDSTFVTLHVGAGTFQPVRVDKL 218
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+DH+MH E+ + T A+ ++RGGR+++VGTTS+R LE+A+ G + P++G T+I
Sbjct: 219 EDHVMHHELVHVRQDTVDAVARTRARGGRVIAVGTTSVRSLESASRH-GALRPFTGDTDI 277
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
FI PGY F+AVD L++NFHLP+STL+MLVSAF G E Y+ A+ YRF+SYGD
Sbjct: 278 FIYPGYSFQAVDALITNFHLPESTLIMLVSAFAGYENVMGAYKEAVREGYRFFSYGDA 335
>gi|222637741|gb|EEE67873.1| hypothetical protein OsJ_25689 [Oryza sativa Japonica Group]
Length = 1723
Score = 252 bits (644), Expect = 6e-65, Method: Composition-based stats.
Identities = 147/354 (41%), Positives = 207/354 (58%), Gaps = 20/354 (5%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+F +DLP IA P+ R ++RL++V P P +D V DLP+ L D +VFN+T
Sbjct: 1385 DFHYDLPAELIAQAPLAERSASRLLLVPP---APDGFTDLQVRDLPSLLQPGDLLVFNDT 1441
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQS 124
+VI A+L G + + + + SK K G + +
Sbjct: 1442 RVIPARLFGQK-----ASGGRVEILIERLLGGQQARAQVGASKSPKAGSRIAL-----DA 1491
Query: 125 RLEATVIDKWNTGEI-LLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTT 183
EA V+ + GE +L F + LE+ + G +PLPPYI R+ +D R+ YQT
Sbjct: 1492 GGEAEVLGR--DGEFYVLQFHVPE-SLEQWLLHAGRLPLPPYIQREPGVDDRE--RYQTV 1546
Query: 184 YAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSE 243
+A+ G+VAAPTAGLHF LL+ L + G++ VTLHVGAGTF PV+ +D DH+MH E
Sbjct: 1547 FAREVGAVAAPTAGLHFDEPLLAALKNKGVEFGHVTLHVGAGTFQPVRADDLKDHVMHRE 1606
Query: 244 IGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRF 303
+ A Q + ++ GGR++ VGTT +R LE+A DG + P++G T IFITPGYR
Sbjct: 1607 WLNVGAELVQQVRRTRAAGGRVIGVGTTVVRALESA-MRDGELLPFAGETQIFITPGYRI 1665
Query: 304 RAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
R+VD +++NFHLP+STLLM++SAF G + + YQHAI YRF+SYGD LLF
Sbjct: 1666 RSVDAMVTNFHLPESTLLMMISAFAGKDRVFEAYQHAIEQRYRFFSYGDAMLLF 1719
>gi|311694369|gb|ADP97242.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [marine
bacterium HP15]
Length = 367
Score = 252 bits (644), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 155/363 (42%), Positives = 213/363 (58%), Gaps = 38/363 (10%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLV-SDLPAFLNSNDAI 59
M V +F FDLP IA P+ R ++RL+ + LS L DH + S+LP L D +
Sbjct: 1 MNVSDFHFDLPDELIARYPLKDRSASRLLCLD-GLSGKL---DHRIFSELPDLLQPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWS----VYARPSKVIKKGDIL 115
VFNNT+VI A+L G +KE + + V + + R SK +K+G
Sbjct: 57 VFNNTRVIPARLFG---------KKETGGQVEVLVERVTGEPDIIAHVRASKALKQGQ-- 105
Query: 116 HFFSQDGQS-----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKR 170
+DG S R EA + E +L LER +G +PLPPY+ R
Sbjct: 106 KVILEDGTSLRMAGRDEALFHLVCESEEPVLEV------LER----IGHMPLPPYV--DR 153
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
P ++ D YQT YA+ G+VAAPTAGLHF +LL +L + GI+ FVTLHVGAGTF PV
Sbjct: 154 PDESTDRERYQTVYAREAGAVAAPTAGLHFDESLLEKLAACGIESAFVTLHVGAGTFQPV 213
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWS 290
+V+ +DH MHSE+ + A+ ++RGGR+V+VGTTS+R LE+A + G + ++
Sbjct: 214 RVDKIEDHTMHSEVVNVPQDAVDAIERTRARGGRVVAVGTTSVRSLESA-SRGGRLRAFT 272
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G T+IFI PGYRF+ VD L++NFHLP+STL+MLVSAF G + Y+ A+ YRF+SY
Sbjct: 273 GETDIFIYPGYRFQTVDALITNFHLPESTLIMLVSAFAGYDNVMSAYREAVKERYRFFSY 332
Query: 351 GDT 353
GD
Sbjct: 333 GDA 335
>gi|229553782|ref|ZP_04442507.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Lactobacillus rhamnosus LMS2-1]
gi|229312856|gb|EEN78829.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Lactobacillus rhamnosus LMS2-1]
gi|259649097|dbj|BAI41259.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase
[Lactobacillus rhamnosus GG]
Length = 361
Score = 252 bits (643), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 141/356 (39%), Positives = 205/356 (57%), Gaps = 17/356 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FD+DLP IA P+ RD++RL+V++ + + D D+ + DA+V N
Sbjct: 22 LSDFDYDLPHELIAQTPLKERDASRLLVLNADTGA---MQDKHFYDILDYFKPGDALVMN 78
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+V+ A+L GV+ + L S + W +P++ G ++ F G
Sbjct: 79 DTRVMPARLYGVK----PETGAHMEVLLLNNTSGDDWETLMKPARKAPVGTVIDF----G 130
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
L+ATV + G ++ F GI +E + +G PLPPYI K D YQT
Sbjct: 131 DGLLKATVTKELEHGGRMIHFDYDGIFME-ILDKLGETPLPPYIKEK----LEDPEMYQT 185
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
Y+K GS AAPTAGLH+T LL ++ G+K+ ++TLHVG GTF PV E+ + H MHS
Sbjct: 186 VYSKELGSAAAPTAGLHWTKELLQKVQDKGVKLVYLTLHVGLGTFRPVVEENIEAHKMHS 245
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + A LN V+ GGRI++ GTTS+R LE T+ DG I SG+T+IFI PGY
Sbjct: 246 EFYRLTPEAAATLNEVRDNGGRIIATGTTSIRTLEAIGTKFDGAIKADSGWTDIFIKPGY 305
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+++ VD ++NFHLPKSTL+MLV+AF G + Y+HAI YRF+S+GD ++
Sbjct: 306 QWKVVDAFITNFHLPKSTLVMLVAAFTGRDTILNAYKHAIEEKYRFFSFGDAMFIY 361
>gi|199598074|ref|ZP_03211497.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Lactobacillus rhamnosus HN001]
gi|258507749|ref|YP_003170500.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus rhamnosus GG]
gi|258538939|ref|YP_003173438.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus rhamnosus Lc 705]
gi|199591000|gb|EDY99083.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Lactobacillus rhamnosus HN001]
gi|257147676|emb|CAR86649.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus rhamnosus GG]
gi|257150615|emb|CAR89587.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus rhamnosus Lc 705]
Length = 356
Score = 252 bits (643), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 141/356 (39%), Positives = 205/356 (57%), Gaps = 17/356 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FD+DLP IA P+ RD++RL+V++ + + D D+ + DA+V N
Sbjct: 17 LSDFDYDLPHELIAQTPLKERDASRLLVLNADTGA---MQDKHFYDILDYFKPGDALVMN 73
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+V+ A+L GV+ + L S + W +P++ G ++ F G
Sbjct: 74 DTRVMPARLYGVK----PETGAHMEVLLLNNTSGDDWETLMKPARKAPVGTVIDF----G 125
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
L+ATV + G ++ F GI +E + +G PLPPYI K D YQT
Sbjct: 126 DGLLKATVTKELEHGGRMIHFDYDGIFME-ILDKLGETPLPPYIKEK----LEDPEMYQT 180
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
Y+K GS AAPTAGLH+T LL ++ G+K+ ++TLHVG GTF PV E+ + H MHS
Sbjct: 181 VYSKELGSAAAPTAGLHWTKELLQKVQDKGVKLVYLTLHVGLGTFRPVVEENIEAHKMHS 240
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + A LN V+ GGRI++ GTTS+R LE T+ DG I SG+T+IFI PGY
Sbjct: 241 EFYRLTPEAAATLNEVRDNGGRIIATGTTSIRTLEAIGTKFDGAIKADSGWTDIFIKPGY 300
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+++ VD ++NFHLPKSTL+MLV+AF G + Y+HAI YRF+S+GD ++
Sbjct: 301 QWKVVDAFITNFHLPKSTLVMLVAAFTGRDTILNAYKHAIEEKYRFFSFGDAMFIY 356
>gi|227432397|ref|ZP_03914387.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Leuconostoc mesenteroides subsp. cremoris ATCC 19254]
gi|227351836|gb|EEJ42072.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Leuconostoc mesenteroides subsp. cremoris ATCC 19254]
Length = 377
Score = 252 bits (643), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 144/357 (40%), Positives = 204/357 (57%), Gaps = 13/357 (3%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FD+DLP + IA P+ RD++RL+ ++ D D+ +LN DAIV N
Sbjct: 33 LSDFDYDLPEALIAQTPLKQRDASRLLALNAKTGG---YEDEHFYDILDYLNPGDAIVMN 89
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
N++V+ A+L+G R E + H V W +P+K G + F
Sbjct: 90 NSRVLPARLHGARPETGGHAEVLLLRQDHGDV----WETLVKPAKKSPVGSTIVFGDDIE 145
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ ATV+ + G + F GI +E + +G +PLPPYI K R YQT
Sbjct: 146 NPIMTATVVGELEHGGRYIEFHYDGIFMEL-LDQLGEMPLPPYIKEKLDDQER----YQT 200
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
Y+K+ GS AAPTAGLH+T LL R+ + G+K +TLHVG GTF PV E+ +DH MHS
Sbjct: 201 VYSKVDGSAAAPTAGLHWTPELLDRVRAKGVKTVELTLHVGLGTFRPVDEENIEDHKMHS 260
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + A LNSV+ GGRI++ GTTS+R LET T+ +G + SG+T+IFI PGY
Sbjct: 261 EFYQLSQEAADELNSVRKHGGRIIATGTTSIRTLETIGTKFNGDLTADSGWTDIFIKPGY 320
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+ VD ++NFHLPKSTL+MLV+AF G + Y+HA+ YRF+S+GD + +
Sbjct: 321 NWTVVDAFITNFHLPKSTLVMLVAAFTGRDNILNAYKHAVDDQYRFFSFGDAMFIHK 377
>gi|325206771|gb|ADZ02224.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis M04-240196]
Length = 346
Score = 252 bits (643), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 207/356 (58%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P++ PL D + DL ++ D +V
Sbjct: 1 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPDM--PL--QDRVFGDLSDYVGEGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDSG-----GRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 109 --EGGIRAVMVGR--EGELFCLRFEGGQTVYELLEQNGHLPLPPYI--ERAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+VE ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVEKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + TA A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 223 HSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF D L++NFHLPKSTLLMLVSAF G+ + Y++A+ YRF+SYGD +L
Sbjct: 283 YRFNVADRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGDAMIL 338
>gi|114331419|ref|YP_747641.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Nitrosomonas eutropha C91]
gi|122313768|sp|Q0AG56|QUEA_NITEC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|114308433|gb|ABI59676.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Nitrosomonas eutropha C91]
Length = 346
Score = 252 bits (643), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 150/357 (42%), Positives = 206/357 (57%), Gaps = 18/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ R +R++ ++ S + D DLPA+L D IV
Sbjct: 1 MKTDDFDFSLPNELIAQLPLANRADSRMLYINSRQSD---LRDAAFKDLPAYLKQGDVIV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+V+ A+L G + ++ + + + R S G L
Sbjct: 58 FNNTRVVKARLAGFKST-----GGKVEVMIERILGTHQARALIRASHAPAIGSTL-LLEN 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
++EA D + + + S IEL Q G PLPPYI R A D Y
Sbjct: 112 AITVQVEAREQDIYT---LRFIHSQPLIELLDQ---YGHTPLPPYIGRI--ATASDESRY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF +L+ L ++GIK+ +VTLHVGAGTF PV+VE+ + HIM
Sbjct: 164 QTVFAQETGAVAAPTAGLHFDETMLTTLQTLGIKIAWVTLHVGAGTFQPVRVENINQHIM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE-TATTEDGIINPWSGFTNIFITP 299
H+E I T + + K+ GG +++VGTTSLR LE +A DG + S TN+FITP
Sbjct: 224 HTEQYHIPTETIEIIRRCKAGGGSVLAVGTTSLRALEASALIGDGELVAGSNETNLFITP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
G++FR VD L++NFHLP+STLLMLVSAF GIE + YQHA+++ YRF+SYGD L+
Sbjct: 284 GFQFRVVDRLLTNFHLPRSTLLMLVSAFAGIETIRHAYQHAVNNHYRFFSYGDAMLI 340
>gi|116617730|ref|YP_818101.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|116096577|gb|ABJ61728.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Leuconostoc mesenteroides subsp. mesenteroides ATCC
8293]
Length = 377
Score = 251 bits (642), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 144/357 (40%), Positives = 205/357 (57%), Gaps = 13/357 (3%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FD+DLP + IA P+ RD++RL+ ++ D D+ +LN DAIV N
Sbjct: 33 LSDFDYDLPEALIAQTPLKQRDASRLLALNAKTGG---YEDKHFYDILDYLNPGDAIVMN 89
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
N++V+ A+L+G R E + H V W +P+K G + F
Sbjct: 90 NSRVLPARLHGARPETGGHAEVLLLRQDHGDV----WETLVKPAKKSPVGSTIVFGDDIE 145
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ ATV+ + G + F GI +E ++ +G +PLPPYI K R YQT
Sbjct: 146 NPIMTATVVGELEHGGRYIEFHYDGIFMEL-LNQLGEMPLPPYIKEKLDDQER----YQT 200
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
Y+K+ GS AAPTAGLH+T LL R+ + G+K +TLHVG GTF PV E+ +DH MHS
Sbjct: 201 VYSKVDGSAAAPTAGLHWTPELLDRVRAKGVKTVELTLHVGLGTFRPVDEENIEDHKMHS 260
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + A LNSV+ GGRI++ GTTS+R LET T+ +G + SG+T+IFI PGY
Sbjct: 261 EFYQLSQEAADELNSVRKHGGRIIATGTTSIRTLETIGTKFNGDLTADSGWTDIFIKPGY 320
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+ VD ++NFHLPKSTL+MLV+AF G + Y+HA+ YRF+S+GD + +
Sbjct: 321 NWTVVDAFITNFHLPKSTLVMLVAAFTGRDNILNAYKHAVDDQYRFFSFGDAMFIHK 377
>gi|119490207|ref|ZP_01622720.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Lyngbya sp.
PCC 8106]
gi|119454093|gb|EAW35246.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Lyngbya sp.
PCC 8106]
Length = 371
Score = 251 bits (642), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 148/367 (40%), Positives = 201/367 (54%), Gaps = 29/367 (7%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLV-SDLPAFLNSNDAIVFNNT 64
+D++LP RIA PV PRD +RL+V+ L H V DLP +L S+D +VFNNT
Sbjct: 13 YDYELPEERIAQNPVVPRDQSRLLVIDS-----LTSHHHRVFRDLPHWLKSDDLLVFNNT 67
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKG-----DILHFFS 119
+VI A+L G + + L PN W +P K K G + LH
Sbjct: 68 QVIPARLYGHK-----SSGGSVEILLLEEQKPNCWLALVKPGKYFKPGVKIEFEPLHPAP 122
Query: 120 QDGQSRLEATVIDKWNT--GEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L A V+D T G +L + G L Q+ G IP PPY+ + + +
Sbjct: 123 DSILQPLSAIVVDTDETTGGRLLQFYLPQGQSLIEQLDQFGHIPFPPYVNQSQAFPQQ-- 180
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YA+ G+VAAPTAGLHFT L RL GI FVTLHVG GTF PV+V+D
Sbjct: 181 --YQTIYAQRPGAVAAPTAGLHFTEELFERLHHQGINKAFVTLHVGVGTFRPVEVQDITT 238
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+E + T + + K+ GGR+++VGTT +R LE +G + + G T+ FI
Sbjct: 239 HQMHAEWIEVSPETVEQIQKTKANGGRVIAVGTTVVRTLEGVAMAEGKLTSYRGKTDAFI 298
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAIS-------HAYRFYSY 350
PGY+F+ +D L++NFHLP+S+L+MLV+AF G +YQ AI+ H YRFYS+
Sbjct: 299 YPGYQFQVIDGLITNFHLPRSSLMMLVAAFIGRPRLLDLYQDAIAQSAEGFTHPYRFYSF 358
Query: 351 GDTSLLF 357
GD L+
Sbjct: 359 GDGMLIL 365
>gi|328950409|ref|YP_004367744.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Marinithermus hydrothermalis DSM 14884]
gi|328450733|gb|AEB11634.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Marinithermus hydrothermalis DSM 14884]
Length = 342
Score = 251 bits (642), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 146/358 (40%), Positives = 204/358 (56%), Gaps = 28/358 (7%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++++ +DLPP RIA + PRDSAR+MV+H + + ++PA+L D +V N
Sbjct: 10 LEDYAYDLPPERIAQQGAEPRDSARMMVLHRETGR---LEHRIFREIPAYLRPGDVLVLN 66
Query: 63 NTKVITAQLNGVRFCHINRREKE--ISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
TKVI A+ + R+ + L W RP + + G LHF
Sbjct: 67 QTKVIPART-------VARKPTGAVLEVLLLREEVAGRWRALVRPGRRARVGAELHF--D 117
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYI-ARKRPIDARDYVD 179
+G L A V GE +L F+ ++ + +G PLPPYI A RP
Sbjct: 118 EG---LRAVVEGIGEGGERILRFAG---DVWAHLERIGRTPLPPYIHAEVRP------ER 165
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A++ GSVAAPTAGLHFT LL+RL +G++V ++TLHVG GTF PVK + + H+
Sbjct: 166 YQTVFARVPGSVAAPTAGLHFTPELLARLEGMGVEVRYLTLHVGPGTFKPVK-DSIERHV 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH E + TA+A+N K+ G R+V+VGTT +R LE+A + G T +FI P
Sbjct: 225 MHEEAYHVPEETARAVNRAKAEGRRVVAVGTTVVRALESAWRAGEGVRAGEGATRLFIRP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F AVD L++NFHLP+STLLMLV+AF G E T + Y+ A++ YRFYS GD L+
Sbjct: 285 PYTFHAVDALVTNFHLPRSTLLMLVAAFAGYETTMRAYRTAVAEGYRFYSLGDAMLIL 342
>gi|126654017|ref|ZP_01725850.1| hypothetical protein BB14905_09820 [Bacillus sp. B14905]
gi|126589491|gb|EAZ83635.1| hypothetical protein BB14905_09820 [Bacillus sp. B14905]
Length = 346
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 146/364 (40%), Positives = 203/364 (55%), Gaps = 22/364 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDF+LP IA P+ R ++RLMVV P + + H + + L + D +V
Sbjct: 1 MRVEDFDFELPEELIAQTPLVDRTASRLMVVTPG---SIEVEHHHFAHVLDELRAGDCLV 57
Query: 61 FNNTKVITAQLNGVR---FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
N+T+V+ A+L GV+ HI L + W +P+K +K G ++ F
Sbjct: 58 LNDTRVLPARLMGVKEETGAHIE------VLLLKQLAGSDEWETLVKPAKRVKVGTVITF 111
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
G L AT + + G F GI E + +G +PLPPYI K D
Sbjct: 112 ----GDGLLTATCTGELDHGGRTFEFHYDGIFYE-ILEQLGEMPLPPYIREK----LEDK 162
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YAK +GS AAPTAGLHFT LL ++ + G++V F+TLHVG GTF PV V+ ++
Sbjct: 163 DRYQTVYAKERGSAAAPTAGLHFTEELLEQVKAKGVEVVFITLHVGLGTFRPVSVDSIEN 222
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIF 296
H MH+E + A +N VK GG++++VGTTS R LET ++ G + P G+T+IF
Sbjct: 223 HEMHAEFYSVTDEAADTINRVKRNGGKVIAVGTTSTRTLETIGSKYGGEVRPEQGWTSIF 282
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY F VD L++NFHLPKSTL+MLVS E YQ A+ YRF+S+GD +
Sbjct: 283 IYPGYTFSVVDGLITNFHLPKSTLVMLVSTLATRETILSAYQQAVEEKYRFFSFGDAMFI 342
Query: 357 FQKR 360
K
Sbjct: 343 RPKE 346
>gi|189425071|ref|YP_001952248.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Geobacter
lovleyi SZ]
gi|238692103|sp|B3E2S1|QUEA_GEOLS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|189421330|gb|ACD95728.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Geobacter
lovleyi SZ]
Length = 341
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 146/360 (40%), Positives = 203/360 (56%), Gaps = 24/360 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+VKE+ F LP IA P RD +RLMV+ + S+ S + +L +D +V
Sbjct: 1 MLVKEYSFTLPDELIARYPANQRDGSRLMVLDRQTAAR---SEIAFSQIVEWLRPDDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHM----RVSPNSWSVYARPSKVIKKGDILH 116
N+TKVI A+L G +KE + + V W R SK + G +
Sbjct: 58 LNDTKVIPARLFG---------QKETGGRIELFLVEPVGDACWRCLLRSSKRCRTGQSIR 108
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
+ A V+++ + L+ F S + E + VG +P+PPY+ R+ + D
Sbjct: 109 LAEG-----VTAEVVEQLGEQDWLIRFHGSD-DFESWLQRVGQMPIPPYLNRES--EELD 160
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
V YQT YA G+VAAPTAGLHFT LL R+ GI++ VTLHVG GTF PV+VE
Sbjct: 161 RVRYQTVYASESGAVAAPTAGLHFTQELLERIQEKGIRLARVTLHVGLGTFQPVRVERVQ 220
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
DH++H E + + TA A+ ++RGGR+++VGTT+ R LE A G + G +IF
Sbjct: 221 DHVIHRERYRLPSETAAAVTETRARGGRVIAVGTTACRTLEYAADNAGHLQAGQGEADIF 280
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGYRF+ VD L++NFHLP+STLLMLVSAF G E Y+ A++ +RFYSYGD L+
Sbjct: 281 IYPGYRFKVVDALLTNFHLPESTLLMLVSAFGGKEFILSAYEAAVNRQFRFYSYGDAMLI 340
>gi|325204815|gb|ADZ00269.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis M01-240355]
Length = 346
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 208/356 (58%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P++ PL D + DL ++ + D +V
Sbjct: 1 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPDM--PL--QDRVFGDLQDYVEAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDSG-----GRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A + + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 109 --EGGIRAVTVGR--EGELFCLRFEGGQTVYELLEQNGHLPLPPYI--ERAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + TA A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 223 HSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF VD L++NFHLPKSTLLMLVSAF G+ + Y++A+ YRF+SYGD +L
Sbjct: 283 YRFNVVDRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGDAMVL 338
>gi|325143754|gb|EGC66071.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis M01-240013]
Length = 356
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 207/356 (58%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P++ PL D + DL ++ D +V
Sbjct: 11 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPDM--PL--QDRVFGDLSDYVGEGDVLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 67 FNNTKVMKARLFGQKDSG-----GRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 119 --EGGIRAVMVGR--EGELFCLRFEGGQTVYELLEQNGHLPLPPYI--ERAADADDDSRY 172
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+VE ++H M
Sbjct: 173 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVEKIEEHKM 232
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + TA A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 233 HSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 292
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF D L++NFHLPKSTLLMLVSAF G+ + Y++A+ YRF+SYGD +L
Sbjct: 293 YRFNVADRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGDAMVL 348
>gi|299535652|ref|ZP_07048973.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lysinibacillus fusiformis ZC1]
gi|298728852|gb|EFI69406.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lysinibacillus fusiformis ZC1]
Length = 346
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 145/364 (39%), Positives = 208/364 (57%), Gaps = 22/364 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDF+LP IA P+ R ++RLMVV P + + H + + L++ D +V
Sbjct: 1 MRVEDFDFELPEELIAQTPLVDRTASRLMVVTPGSNK---VEHHHFAHVLDELHAGDCLV 57
Query: 61 FNNTKVITAQLNGVR---FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
N+T+V+ A+L GV+ HI L + W +P+K +K G ++ F
Sbjct: 58 LNDTRVLPARLMGVKEETGAHIE------VLLLKQMAGTDEWETLVKPAKRVKVGTVITF 111
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
G L AT + G F GI E + +G +PLPPYI K ++ +D
Sbjct: 112 ----GDGLLTATCTGELEHGGRTFEFQYDGIFYE-ILEQLGEMPLPPYIREK--LEDKD- 163
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YAK +GS AAPTAGLHFT LL+++ + G++V F+TLHVG GTF PV V+ ++
Sbjct: 164 -RYQTVYAKERGSAAAPTAGLHFTEELLAQVKAKGVEVVFITLHVGLGTFRPVSVDSIEN 222
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIF 296
H MH+E + A +N VK GG++++VGTTS R LET ++ +G + G+T+IF
Sbjct: 223 HEMHAEFYSVSEQAAHTINRVKRNGGKVIAVGTTSTRTLETIGSKYEGEVRAEQGWTSIF 282
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY F VD L++NFHLPKSTL+MLVS E YQ A+ YRF+S+GD +
Sbjct: 283 IYPGYNFTVVDGLITNFHLPKSTLVMLVSTLATRETILSAYQQAVEERYRFFSFGDAMFI 342
Query: 357 FQKR 360
K+
Sbjct: 343 RPKK 346
>gi|323464269|gb|ADX76422.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus pseudintermedius ED99]
Length = 341
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 148/356 (41%), Positives = 213/356 (59%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EFD+ LP S IA P+ RD +RL+ ++ + D D+ F D +V
Sbjct: 1 MNIEEFDYVLPESLIAQTPLKQRDQSRLLYLNRDTGET---EDLHFKDITRFFQPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + ++ + W V +P+K IK G L F
Sbjct: 58 LNDTRVMPARLFGIK----EETNAKVEMLMLTQIEGDDWEVLLKPAKRIKLGQTLSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +++AT I + + G ++ S GI L+ ++ +G +PLPPYI K +D ++ Y
Sbjct: 111 -GEGKIKATCIKELDQGGRIMRLSYEGI-LQERLDELGEMPLPPYI--KERLDEKER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + G+++ F+TLHVG GTF PV V+ DDH M
Sbjct: 165 QTVYAKAAGSAAAPTAGLHFTDALLDDIRRQGVQIAFITLHVGLGTFRPVSVDHIDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN K+ G RI+SVGTTS R LET T+ SG+TNIFI PG
Sbjct: 225 HSEYYQMSQETADILNQTKAAGHRIISVGTTSTRTLETIRTQFDTFQATSGWTNIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ F+A+D L++NFHLPKSTL+MLVSAF + Y HA++ YRF+S+GD ++
Sbjct: 285 FEFKAIDGLITNFHLPKSTLVMLVSAFSSRQFVLSAYHHAVAEKYRFFSFGDAMII 340
>gi|295100843|emb|CBK98388.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Faecalibacterium prausnitzii L2-6]
Length = 342
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 141/359 (39%), Positives = 201/359 (55%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+ K+F +DLP IA P PRD+ARLMV+ I + DLP +L D +V
Sbjct: 1 MLKKDFWYDLPKELIAQEPASPRDAARLMVLSQKDDS---IQHRIFHDLPEYLEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHM--RVSPNSWSVYARPSKVIKKGDILHFF 118
NN+KV+ A++ G++ + C L + +V + W A+P K ++ G + F
Sbjct: 58 VNNSKVLPARIVGIK------QPTGAVCELLLLRQVKGDQWECLAKPGKRMQPGTKVSF- 110
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
G L A V + G + F L ++ G +PLPPYI ++ D
Sbjct: 111 ---GDGSLTAIVDETLEDGNKFVTFYYDTETLYEKLDEFGKMPLPPYITKQ----LDDQS 163
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YAK GS AAPTAGLHFT L+ + + G+ + VTLHVG GTF PV+ ++ DH
Sbjct: 164 QYQTVYAKELGSAAAPTAGLHFTPELMDTIRAKGVNITEVTLHVGLGTFRPVQEDEITDH 223
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE + TA+ ++ K+ G R+++VGTTS R LE + G I SG T+IF+
Sbjct: 224 KMHSEWYSVSEETAKLIHDTKAAGHRVIAVGTTSCRTLEAVAAKYGEIKACSGNTDIFLY 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG +F +D L++NFHLP+STL+MLVSA G E+T Y+ A+ YRF+S+GD L+
Sbjct: 284 PGVKFNCIDGLITNFHLPESTLIMLVSALYGYEKTMAAYKVAVEQKYRFFSFGDAMLIL 342
>gi|261393199|emb|CAX50818.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queuosine
biosynthesis protein QueA) [Neisseria meningitidis 8013]
Length = 346
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 208/356 (58%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P++ PL D + DL ++ D +V
Sbjct: 1 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPDM--PL--QDRVFGDLSDYVGEGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDSG-----GRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 109 --EGGIRAVMVGR--EGELFCLRFEGGQTVYELLEQNGHLPLPPYI--ERAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLHRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + TA A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 223 HSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF VD L++NFHLPKSTLLMLVSAF G+ + Y++A+ YRF+SYGD +L
Sbjct: 283 YRFNVVDRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGDAMVL 338
>gi|307153956|ref|YP_003889340.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Cyanothece
sp. PCC 7822]
gi|306984184|gb|ADN16065.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Cyanothece
sp. PCC 7822]
Length = 365
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 148/368 (40%), Positives = 202/368 (54%), Gaps = 25/368 (6%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D++LP IA PV PRD +RL++V P + + +LP +L D +VF
Sbjct: 6 LLSSYDYELPLDLIAQNPVVPRDMSRLLIV----DTPASHTHSIFRELPKWLLPGDLLVF 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNT+VI A+L G + I L S W +P K K G L F+
Sbjct: 62 NNTRVIPARLYGCKSTG-----APIEILLLEPKSNGCWLALVKPGKRFKVGSELWFYPPS 116
Query: 122 GQSR-----LEATVIDK--WNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
+ L+A V+D+ G IL + + +G +PLPPYI DA
Sbjct: 117 ANPKNPEIFLKAKVLDRDEATGGRILQFLWDNDQSFWELLEKIGQVPLPPYITSS---DA 173
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
+ YQT YAK G+VAAPTAGLHFT LL L SIGI ++TLHVG GTF PV+ ED
Sbjct: 174 KS-SQYQTVYAKELGAVAAPTAGLHFTDELLKSLQSIGIDQAWITLHVGVGTFRPVEKED 232
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLL-----ETATTEDGIINPW 289
H MH+E + + T + K+RGGR+++VGTT +R L ET E + P+
Sbjct: 233 ITQHQMHTEWLEVPSATVTKIQETKARGGRVIAVGTTVVRALEGAAKETQAPESEYLLPF 292
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
G T++FI PGYR+R +D +++NFHLPKS+LLMLVSA G E ++Y AI YRFYS
Sbjct: 293 QGRTDLFIYPGYRWRVIDGMITNFHLPKSSLLMLVSALIGRERLLELYHQAIQEKYRFYS 352
Query: 350 YGDTSLLF 357
+GD L+
Sbjct: 353 FGDAMLIL 360
>gi|229824011|ref|ZP_04450080.1| hypothetical protein GCWU000282_01315 [Catonella morbi ATCC 51271]
gi|229786365|gb|EEP22479.1| hypothetical protein GCWU000282_01315 [Catonella morbi ATCC 51271]
Length = 344
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 147/358 (41%), Positives = 207/358 (57%), Gaps = 16/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ K+FD+ LP IA P+ R ++RL+V+ D + FLN DA+V
Sbjct: 2 LTTKDFDYHLPEHLIAQTPLADRAASRLLVLDRQTGRK---QDLHFDQIINFLNPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N T+VI A+L G++ + L N W +P++ K G + F +
Sbjct: 59 VNETRVIPARLFGIK----PETGGHLEVLLLNNTQGNQWECLIKPARRAKTGTQI-VFGE 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DG RL ATV+ + + G ++ FS G+ LE SL G +PLPPYI + D Y
Sbjct: 114 DG--RLTATVVSEGDHGGRIIEFSYEGVFLEILESL-GQMPLPPYIKER----LEDADRY 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + + G+++ + LHVG GTF PV + +DH M
Sbjct: 167 QTVYAKENGSAAAPTAGLHFTDELLEAIKAKGVEIIPLVLHVGLGTFRPVSADSIEDHEM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + +A A+ +V++RGG+I +VGTTS+R LET A DG + SG+T IFI+P
Sbjct: 227 HAEYYQLSQESADAIQAVQARGGKIFAVGTTSVRTLETIAAKFDGQVRADSGWTQIFISP 286
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
G+ F+ VD L++NFHLP STL+MLVSAF E Y+HA+ YRF+S+GD+ L+
Sbjct: 287 GFEFKVVDHLITNFHLPCSTLVMLVSAFYNREAVLAAYEHAVEAEYRFFSFGDSMLIL 344
>gi|325109089|ref|YP_004270157.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Planctomyces brasiliensis DSM 5305]
gi|324969357|gb|ADY60135.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Planctomyces brasiliensis DSM 5305]
Length = 354
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 139/357 (38%), Positives = 203/357 (56%), Gaps = 11/357 (3%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D+ LP IA PV PRD +RL+V I +LP +L +ND +++N
Sbjct: 7 IEAYDYHLPEELIAQHPVEPRDHSRLLVYR---RADQSIVHRRFHNLPEYLRANDCLIWN 63
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRV-SPNSWSVYARPSKVIKKGDILHFFSQD 121
T+V+ A+L G R + E L +++ + W + + +K G+ L
Sbjct: 64 QTRVVPARLYGRRAETGGKWEG-----LFLKLLADGDWEIIGQTRGKLKAGEFLEIPHPG 118
Query: 122 GQSRLEATVIDKWNTGEILLVFSISG-IELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ L+ +I++ G + +G + + G+IPLPPYI +A D Y
Sbjct: 119 SEDVLQLKLIERREGGCWIARPETNGEVSPWDLLDQFGSIPLPPYIQDGHASEA-DRERY 177
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHFT L+ R + G+ VTLHVG GTF PV V++ D H M
Sbjct: 178 QTVYAQTPGAVAAPTAGLHFTPELIERCQAAGVDCSSVTLHVGLGTFRPVSVDNLDAHQM 237
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + + T L GGR ++VGTT++R LETA+ E G + PW G +++FI PG
Sbjct: 238 HREWCEVTSETVGQLQRCYEAGGRRIAVGTTTVRTLETASRESGQLQPWDGESDLFIRPG 297
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+FR+ D L++NFHLPKSTLL+++SA G EE ++Y+ AIS YRFYSYGD L+
Sbjct: 298 YQFRSTDGLITNFHLPKSTLLIMLSAMVGREEILRIYEEAISEQYRFYSYGDAMLIL 354
>gi|206901815|ref|YP_002251314.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Dictyoglomus thermophilum H-6-12]
gi|206740918|gb|ACI19976.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Dictyoglomus thermophilum H-6-12]
Length = 339
Score = 251 bits (640), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 140/357 (39%), Positives = 205/357 (57%), Gaps = 20/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + ++D+ LP IA P PRD++RLM+V+ I+ + ++ +L + D +V
Sbjct: 3 LKLSDYDYYLPEELIAQEPAEPRDTSRLMLVNRKTGE---INITIFREIKNYLKAGDVLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L G + +I L ++ + +P K K G +HF
Sbjct: 60 LNNTKVIPARLYGKKETG-----AKIEVLLLKKIGEGKYEALLKPGKRAKIGTKIHFLED 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A V+++ G +L FS +L++ + +G IPLPPYI K+PID D Y
Sbjct: 115 -----IYAEVVERNEEGIFVLKFSQE--DLDKILPEIGNIPLPPYI--KKPID--DPNKY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +G+VAAPTAGLHFT LL L +G+++ ++TLHVG GTF PV VED H +
Sbjct: 164 QTVYAQKEGAVAAPTAGLHFTEELLKTLGEMGVEILYITLHVGLGTFRPVVVEDITKHKL 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
E + A+ +N K R+++VGTT R+LE A G + P SG ++FI PG
Sbjct: 224 DPEYFEVSDEVAERINKAKEERRRVIAVGTTVTRVLE-AQGRSGKVEPGSGLVDLFIYPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+ +D L++NFHLPKSTLLMLV+AF G + KK Y AI RFYS+GD ++
Sbjct: 283 FEFKIIDGLITNFHLPKSTLLMLVAAFMGYDLMKKAYNKAIEERMRFYSFGDAMFIY 339
>gi|317128205|ref|YP_004094487.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Bacillus
cellulosilyticus DSM 2522]
gi|315473153|gb|ADU29756.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Bacillus
cellulosilyticus DSM 2522]
Length = 342
Score = 251 bits (640), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 142/357 (39%), Positives = 203/357 (56%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDF LP IA P+ R ++RL+V++ I DL + + D +V
Sbjct: 1 MDVTQFDFHLPEELIAQTPLADRTASRLLVLNRENGS---IEHRHFKDLLQYFSKGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKV+ A+L G++ +I L S +W +P+K +K G +
Sbjct: 58 LNNTKVLPARLFGIK----EDTGAKIELLLLREESDYTWEALVKPAKRVKIGTKIVI--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L +++ G + F GI + +G +PLPPYI + +D +D Y
Sbjct: 111 -GEGKLIGKCVEELPEGIRKIQFEFDGI-FNEILDELGEMPLPPYIQEQ--LDEKD--RY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +AK GS AAPTAGLHFT LL + +G+ + F+TLHVG GTF PV VE+ +H M
Sbjct: 165 QTVFAKHSGSAAAPTAGLHFTKELLQNIEQLGVHIVFITLHVGLGTFRPVAVENVKEHTM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H E + + A LN +S G +I++VGTTS+R LET A+ DG SG+TNIFI P
Sbjct: 225 HEEYYDMTSEAASVLNEARSNGNKIIAVGTTSVRTLETIASKHDGAFTASSGWTNIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+++A+D +++NFHLPKSTL+MLVSAF G Y A+ YRF+S+GD L+
Sbjct: 285 GYQYKAIDGMITNFHLPKSTLVMLVSAFAGRGNILSAYNAAVEKKYRFFSFGDAMLI 341
>gi|269926046|ref|YP_003322669.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermobaculum terrenum ATCC BAA-798]
gi|269789706|gb|ACZ41847.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermobaculum terrenum ATCC BAA-798]
Length = 336
Score = 251 bits (640), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 146/356 (41%), Positives = 207/356 (58%), Gaps = 21/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++FD+ LPP IA P PRDS+RL+V++ I + DLP +L+ D +V
Sbjct: 1 MRLQDFDYYLPPELIAQTPAEPRDSSRLLVLNKRTGE---IQHAIFRDLPNYLSPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L+G R + + L V W RP++ +K G+ + ++
Sbjct: 58 FNDTRVIPARLHGRR----KQTGGNVEFLLVRHVKDTEWEAMGRPARRLKTGERV-TIAE 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D L+A V++K G +L+ E+ + G IPLPPYI +R Y
Sbjct: 113 D----LDAQVLEKLPEGLLLIRLPQ---EVHENLDKYGEIPLPPYIHDFHGDASR----Y 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHFT L+SRL G+ + F+TLHVG GTF P+K E ++H M
Sbjct: 162 QTVYARDPGAVAAPTAGLHFTEELISRLRDYGVDLRFITLHVGPGTFQPIKTERIEEHKM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +I + L +S G R+V+VGTTS+R LE A W T++FI PG
Sbjct: 222 HSERYYIPEGLLEYLEEKRSAGNRVVAVGTTSVRALEDAAVRRQ-AGTWVE-TDLFIKPG 279
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLPKSTL+MLV+A G E Y+ A+ + YRFYS+GD L+
Sbjct: 280 YQFKIVDALITNFHLPKSTLMMLVAATGGYEHIMNAYRIAVENRYRFYSFGDAMLI 335
>gi|126658466|ref|ZP_01729614.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cyanothece
sp. CCY0110]
gi|126620208|gb|EAZ90929.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cyanothece
sp. CCY0110]
Length = 360
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 151/373 (40%), Positives = 216/373 (57%), Gaps = 36/373 (9%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAIV 60
++ +D+ LPP IA P+ PRD +RL+V++ L H + DLP +L+ D +V
Sbjct: 6 LLSSYDYYLPPELIAQNPMTPRDESRLLVINS-----LRTHTHSIFRDLPEWLSPGDLLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF-- 118
FNNT+VI A+L G + + L P W +P K K G ++F+
Sbjct: 61 FNNTRVIPARLYGKKATG-----APVEILLLEEKEPLCWLALVKPGKRFKIGSEIYFYLD 115
Query: 119 ----SQDGQSRLEATVIDK-WNTGEILLVFSISGIEL-ERQISLVGTIPLPPYIARKRPI 172
SQD + L ATV+D+ TG LL F ++ +++ ++I +G IP PPY+ +
Sbjct: 116 NNDCSQD--NFLVATVVDRDEETGGRLLKFKVNSLDVFWKKIEELGQIPFPPYVTESKAA 173
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ YQT YA+ G+VAAPTAGLHFT LL L GI ++TLHVG GTF PV +
Sbjct: 174 PSQ----YQTIYAQKPGAVAAPTAGLHFTDKLLENLQQKGINQAYITLHVGLGTFRPVDI 229
Query: 233 EDTDDHIMHSEIGFIDAP--TAQALNSVKSRGGRIVSVGTTSLRLLETATT------EDG 284
E+ +H MH E +I+ P T + + K+ GGR+++VGTT +R LE A + G
Sbjct: 230 ENIKEHKMHQE--WIELPEITVEKIKETKANGGRVIAVGTTVVRTLEGAAKAAEMEGKQG 287
Query: 285 IINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHA 344
+I P+ T+IFI PGY +R +D L++NFHLPKS+LLMLVSA G E ++YQ AI
Sbjct: 288 LI-PYRDKTDIFIYPGYSWRVIDGLITNFHLPKSSLLMLVSALIGRERLLELYQIAIEEK 346
Query: 345 YRFYSYGDTSLLF 357
YRFYS+GD L+
Sbjct: 347 YRFYSFGDGMLIL 359
>gi|257126618|ref|YP_003164732.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Leptotrichia buccalis C-1013-b]
gi|257050557|gb|ACV39741.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Leptotrichia buccalis C-1013-b]
Length = 340
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 143/357 (40%), Positives = 208/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF+LP IA V PRD ++L+V++ + + ++ +L +D +V
Sbjct: 1 MNISDFDFELPEELIAQHAVEPRDHSKLLVLNKDKKT---LEHKKFYNIIDYLKKDDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKVI A+L G + + + C L R +W V +P+K +K G L F
Sbjct: 58 INRTKVIPARLFGHKENGVV-----LECFLLKRYDLYTWEVLLKPAKKLKIGQKLIF--S 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DG L+A +++ G ++ F+ G E + +G +PLPPYI K D Y
Sbjct: 111 DGI--LKAELLEIKEDGNRIIKFNFEG-RFEEILDKLGEMPLPPYIMEK----LEDKNRY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK SVAAPTAGLHFT+ LL ++ GI + V L VG GTF PV+VE+ DH M
Sbjct: 164 QTVYAKEGESVAAPTAGLHFTNELLEKIREKGITIAEVFLDVGLGTFRPVQVENVLDHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I TA+ +N K +G R+++VGTTS+R LE++ E+G + G TNIFI
Sbjct: 224 HSEKYRIPEETAKIINEAKKKGNRVIAVGTTSVRTLESSVDENGKLKASEGNTNIFIYGD 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ +D +++NFHLPKSTL+ML+SAF G E + Y+ A+ YRFYS+GD+ ++
Sbjct: 284 YKFKIIDAIITNFHLPKSTLIMLISAFGGKEFIFEAYKKAVEEKYRFYSFGDSMFIY 340
>gi|257062151|ref|YP_003140039.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cyanothece
sp. PCC 8802]
gi|256592317|gb|ACV03204.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Cyanothece
sp. PCC 8802]
Length = 372
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 152/370 (41%), Positives = 212/370 (57%), Gaps = 29/370 (7%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLV-SDLPAFLNSNDAIV 60
++ +D+ LP IA PV PRDS+RL+V++ L H V +LP +L S D +V
Sbjct: 6 LLASYDYHLPAELIAQSPVTPRDSSRLLVLNS-----LTTQVHSVFRELPQWLRSGDLLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF--- 117
NNT+VI A+L G + + L +P SW +P K K+G + F
Sbjct: 61 LNNTRVIPARLYGQKTTG-----APVEILLLEEKTPLSWLALVKPGKRFKRGSQIWFPHP 115
Query: 118 --FSQDGQSRLEATVID-KWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPID 173
+ + L+ TVID TG LL F + +E I +G IPLPPY+
Sbjct: 116 PDETTESSVYLKTTVIDVDPETGGRLLQFEAASVEAFWSAIEELGKIPLPPYVTSSEAQP 175
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
+ YQT YA+ G+VAAPTAGLHFT +LL RL + GI+ ++TLHVG GTF PV+V
Sbjct: 176 GQ----YQTVYAQKPGAVAAPTAGLHFTPDLLQRLQAQGIQQSYITLHVGVGTFRPVEVG 231
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE------TATTEDGIIN 287
D H MHSE + + T +A+ K+RGGR+++VGTT +R LE A + G+I
Sbjct: 232 DITQHQMHSEWLEVPSSTVEAIAETKARGGRVIAVGTTVVRSLEGVAQIAKAEGKSGLI- 290
Query: 288 PWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
P+ G T++FI PGY ++ V+ +++NFHLP+S+LLMLVSA G E +YQ AI YRF
Sbjct: 291 PFRGRTDLFIYPGYSWQVVEGMITNFHLPRSSLLMLVSALIGRERLMSVYQTAIDEKYRF 350
Query: 348 YSYGDTSLLF 357
YS+GD L+
Sbjct: 351 YSFGDGMLIL 360
>gi|290967873|ref|ZP_06559423.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Megasphaera
genomosp. type_1 str. 28L]
gi|290782012|gb|EFD94590.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Megasphaera
genomosp. type_1 str. 28L]
Length = 339
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 144/356 (40%), Positives = 211/356 (59%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F ++LP IA P PRD ARLMV ++ DL A L+ D +V
Sbjct: 1 MKLSDFSYELPKELIAQHPAEPRDHARLMVYDKITGA---VAHRYFYDLAAELHKGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+++VI A+L+G + ++ L V + W V +P K G + F
Sbjct: 58 FNDSRVIPARLHGKK----KETGGKVEVLLLTPVGEDCWEVLVKPGKKALPGTTIEF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
SRL ATV ++ + G ++ F G+ + + +G +PLPPYI K ++ +Y
Sbjct: 111 --SSRLCATVKERTDFGGRIVQFHYDGV-FDEILDQIGEMPLPPYIHEK----MKNPDEY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +GS AAPTAGLHFT NL+ ++ + G++ FVTLHVG GTF PV+ E+ +DH M
Sbjct: 164 QTVYARERGSAAAPTAGLHFTRNLMEKIRAKGVETVFVTLHVGLGTFRPVEEENVEDHEM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A A+N K+ G R+V+VGTTS+R LE+A E G++ SG+T+IFI PG
Sbjct: 224 HSEFYSVTPAAAAAVNRAKAEGRRVVAVGTTSIRTLESAGKE-GVVQAGSGWTDIFIYPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y +R D L++NFHLP+STLLML+SA E+ + Y+ A++ YRF+S+GD +
Sbjct: 283 YTYRIADALVTNFHLPESTLLMLISAMSKREKILQAYRIAVAEGYRFFSFGDAMFI 338
>gi|284048860|ref|YP_003399199.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Acidaminococcus fermentans DSM 20731]
gi|283953081|gb|ADB47884.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Acidaminococcus fermentans DSM 20731]
Length = 338
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 143/356 (40%), Positives = 197/356 (55%), Gaps = 19/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD+DLP IA PV PRDS+RL+V+ + +LP +L D +V
Sbjct: 1 MEVTDFDYDLPQELIAQTPVEPRDSSRLLVMDKKTGE---LEHRHFFNLPEYLKPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L+G + + + L R + W V +P K ++KG + F
Sbjct: 58 FNDTRVIPARLHGFKTTGAH-----VEVFLLNRKNATDWEVLVKPGKKLQKGARIKF--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L ++D + G + F GI E + +G PLPPYI K D Y
Sbjct: 110 --SDELSCEILDTTDFGGRIARFQYDGI-FEEILDRLGETPLPPYIHEK----LEDKERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + +GS AAPTAGLHFT LL ++ +G++ FVTLHVG GTF PV +DH M
Sbjct: 163 QTVYNRERGSAAAPTAGLHFTRELLQKIRDMGVEEVFVTLHVGLGTFRPVNESRIEDHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A A+N K G RI++VGTTS+R LE+A G + +T+IFI PG
Sbjct: 223 HREFYTVSQEAADAINKAKREGRRIIAVGTTSVRTLESAGA-SGEMKAGGNWTSIFIYPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+FR VD L++NFHLP+STL+MLVSA E Y+ A+ YRF+S+GD +
Sbjct: 282 YQFRFVDALVTNFHLPQSTLIMLVSALSTRENILHAYKVAVQEKYRFFSFGDAMFI 337
>gi|218767560|ref|YP_002342072.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis Z2491]
gi|21263920|sp|Q9JW05|QUEA_NEIMA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|121051568|emb|CAM07866.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Neisseria meningitidis Z2491]
Length = 346
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 150/356 (42%), Positives = 207/356 (58%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+ L+V P++ + D + DLP ++ + D +V
Sbjct: 1 MDISDFDFTLPEHLIAQHPPEVRGSSHLLVALPDMP----LQDRVFGDLPDYVEAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDSG-----GRIEALIERVLDSHTALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 109 --EGGIRAVMVGR--EGELFCLRFEGGETVYELLEQNGHLPLPPYI--ERAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + TA A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 223 HSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF D L++NFHLPKSTLLMLVSAF G+ + Y++A+ YRF+SYGD +L
Sbjct: 283 YRFNVADRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGDAMVL 338
>gi|301065826|ref|YP_003787849.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Lactobacillus casei str. Zhang]
gi|300438233|gb|ADK17999.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Lactobacillus casei str. Zhang]
Length = 357
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 141/356 (39%), Positives = 205/356 (57%), Gaps = 17/356 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FD+DLP IA P+ RD++RL+V++ + D D+ + DA+V N
Sbjct: 18 LSDFDYDLPHELIAQTPLKERDASRLLVLNSETGE---MQDKHFYDILDYFKPGDALVMN 74
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+V+ A+L GV+ + L S + W +P++ G ++ F G
Sbjct: 75 DTRVMPARLYGVK----PETGAHMEVLLLNNTSGDDWETLMKPARKAPVGTVIDF----G 126
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
L+ATV + G ++ F GI +E + +G PLPPYI K D YQT
Sbjct: 127 DGLLKATVTKELEHGGRMIHFDYDGIFME-ILDKLGETPLPPYIKEK----LEDPEMYQT 181
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
Y+K GS AAPTAGLH+T +LL ++ G+K+ ++TLHVG GTF PV E+ + H MHS
Sbjct: 182 VYSKELGSAAAPTAGLHWTKDLLKKVQEKGVKLVYLTLHVGLGTFRPVVEENIEAHKMHS 241
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + A LN V+ GGRI++ GTTS+R LE T+ DG I SG+T+IFI PGY
Sbjct: 242 EFYRLTPEAAATLNDVRDNGGRIIATGTTSIRTLEAIGTKFDGAIKADSGWTDIFIKPGY 301
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+++ VD ++NFHLPKSTL+MLV+AF G + Y+HAI YRF+S+GD ++
Sbjct: 302 QWKVVDAFITNFHLPKSTLVMLVAAFTGRDTILNAYKHAIDEKYRFFSFGDAMFIY 357
>gi|33600349|ref|NP_887909.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bordetella
bronchiseptica RB50]
gi|33567948|emb|CAE31861.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bordetella
bronchiseptica RB50]
Length = 357
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 145/356 (40%), Positives = 203/356 (57%), Gaps = 24/356 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FD+ LPP IA P R +RL+ +L + D DL L +D +V
Sbjct: 15 LTLADFDYHLPPELIAQSPAAERGGSRLL----HLDAASRLHDRRFPDLAGLLRPHDLLV 70
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + ++ + +P+ V+ R SK G L
Sbjct: 71 FNDTRVIKARLTGQKAT-----GGKVEVLVERITAPDRALVHVRASKSPGPGMRLRLAEA 125
Query: 121 DGQSRLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
EA V+ + GE+ L F ++L + G PLPPYI DA D
Sbjct: 126 -----FEAEVLGR--EGELFDLRFPAPVLDL---LDAHGATPLPPYITHA--ADATDERR 173
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ G+VAAPTAGLHF +L +L + G++ FVTLHVGAGTF PV+V++ +HI
Sbjct: 174 YQTVYAREPGAVAAPTAGLHFDQPMLEQLAAQGVQRAFVTLHVGAGTFQPVRVQNLAEHI 233
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFI 297
MH+E + T A+ ++ GGRIV+VGTTS+R LE+A +DG + G T +FI
Sbjct: 234 MHAEWYTVPEATVAAIARARAHGGRIVAVGTTSVRALESAAAQAQDGPLAAAQGDTRLFI 293
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
TPGYR+R VD L++NFHLP+STLLMLVSA G+ ++ Y HA++ YRF+SYGD
Sbjct: 294 TPGYRYRIVDALLTNFHLPQSTLLMLVSALAGVAPIRRAYAHAVAERYRFFSYGDA 349
>gi|21231816|ref|NP_637733.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
campestris pv. campestris str. ATCC 33913]
gi|66768058|ref|YP_242820.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
campestris pv. campestris str. 8004]
gi|24212184|sp|Q8P867|QUEA_XANCP RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|81305965|sp|Q4UVX3|QUEA_XANC8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|21113530|gb|AAM41657.1| S-adenosylmethionine: tRNA ribosyltransferase-isomerase
[Xanthomonas campestris pv. campestris str. ATCC 33913]
gi|66573390|gb|AAY48800.1| S-adenosylmethionine: tRNA ribosyltransferase-isomerase
[Xanthomonas campestris pv. campestris str. 8004]
Length = 356
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 151/365 (41%), Positives = 210/365 (57%), Gaps = 24/365 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R ++RL+VV P P SD V DLP L D ++
Sbjct: 1 MKKSDFHYDLPEELIAQAPLAERAASRLLVVPPT---PAAFSDRQVRDLPELLQPGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + SK K G ++
Sbjct: 58 FNDTRVIPARLFGQKASG-----GRVEILIERLLGGQQARAQIGASKSPKAGSVIAL-DA 111
Query: 121 DGQSRLEATVIDKWNTGEI-LLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
GQ A V+ + GE LL F I LE + G +PLPPYI R+ +D R+
Sbjct: 112 GGQ----AEVLGR--DGEFYLLRFDIPA-PLEHWLLDAGRLPLPPYIRREPGLDDRER-- 162
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A+ G+VAAPTAGLHF LL+RL G++ VTLHVGAGTF PV+V+ D H+
Sbjct: 163 YQTVFAREVGAVAAPTAGLHFDEALLARLRERGVEFGHVTLHVGAGTFQPVRVDALDKHV 222
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTED---GIINPWSGFTN 294
MH+E + A + + ++RGGR+++VGTT +R LE+A T+D G + ++G T
Sbjct: 223 MHTEWLNVGAALVEQVRRTRARGGRVIAVGTTVVRSLESAWRKTDDAPHGELQSFAGETQ 282
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PGYR R+VD +++NFHLP+STLLM+VSAF G + Y HAI+ YRF+SYGD
Sbjct: 283 IFILPGYRIRSVDAMVTNFHLPESTLLMMVSAFAGCDRIFAAYAHAIAQRYRFFSYGDAM 342
Query: 355 LLFQK 359
LL+ +
Sbjct: 343 LLWSR 347
>gi|147669366|ref|YP_001214184.1| queuosine biosynthesis protein [Dehalococcoides sp. BAV1]
gi|189038519|sp|A5FR63|QUEA_DEHSB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|146270314|gb|ABQ17306.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Dehalococcoides sp. BAV1]
Length = 343
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 139/359 (38%), Positives = 201/359 (55%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD++LP IA +P PRDS+RL+V++ +++ + ++ + D +V
Sbjct: 1 MKTSDFDYNLPQEYIAQKPAEPRDSSRLLVLNRQSE---ELTNRIFGEITDYFKPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+++V+ A++ G++ +I L R W +PSK K G I+
Sbjct: 58 MNDSRVLPARIKGIK----QDTSAKIEILLLKRDGEGCWEALLKPSKRTKPGTIIDIHQP 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+G +A V+ + LL FS E + +G +PLPPYI P+ D Y
Sbjct: 114 NGGISTQAKVLADKDDSIKLLRFSD-----ETHLMKLGEVPLPPYI--HTPV--ADPERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA GSVAAPTAGLHFT LL RL +G+ +VTLH+G TF PVK ED DH +
Sbjct: 165 QTVYALTNGSVAAPTAGLHFTPELLKRLTEMGVICTYVTLHIGLDTFRPVKEEDPKDHKI 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
H E G + TA A+ K G R+ VGT++ RL+E A+ ++ +I +SG+ ++FI
Sbjct: 225 HREYGILSKETASAICCAKETGKRVFCVGTSATRLVEQASHLSQTSLITSYSGWADLFIL 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+FR D ++NFHLP+ST LML SAF G +K Y+ AIS YRFYS+GD L+
Sbjct: 285 PGYKFRVADCFITNFHLPRSTPLMLTSAFAGWPFLRKAYEKAISEHYRFYSFGDAMLIL 343
>gi|304388396|ref|ZP_07370505.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis ATCC 13091]
gi|304337608|gb|EFM03768.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis ATCC 13091]
gi|319409824|emb|CBY90132.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queuosine
biosynthesis protein QueA) [Neisseria meningitidis WUE
2594]
Length = 356
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 150/356 (42%), Positives = 207/356 (58%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+ L+V P++ + D + DLP ++ + D +V
Sbjct: 11 MDISDFDFTLPEHLIAQHPPEVRGSSHLLVALPDMP----LQDRVFGDLPDYVEAGDVLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 67 FNNTKVMKARLFGQKDSG-----GRIEALIERVLDSHTALAHIRSSKSPKPGMGLVF--- 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 119 --EGGIRAVMVGR--EGELFCLRFEGGETVYELLEQNGHLPLPPYI--ERAADADDDSRY 172
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 173 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 232
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + TA A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 233 HSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 292
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF D L++NFHLPKSTLLMLVSAF G+ + Y++A+ YRF+SYGD +L
Sbjct: 293 YRFNVADRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGDAMVL 348
>gi|296111819|ref|YP_003622201.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Leuconostoc
kimchii IMSNU 11154]
gi|295833351|gb|ADG41232.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Leuconostoc
kimchii IMSNU 11154]
Length = 353
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 145/359 (40%), Positives = 208/359 (57%), Gaps = 15/359 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FD++LP IA P+ RDS+RL+V+ + D D+ +++N DAIV N
Sbjct: 9 LTDFDYNLPEELIAQTPLKQRDSSRLLVLDADSGD---YEDKHFYDILSYVNPGDAIVMN 65
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
N++V+ A+L+G R E + H V W +P+K G + F
Sbjct: 66 NSRVLPARLHGARPETGGHAEVLLLRQDHGDV----WETLVKPAKKSPIGSTIVFGDDMN 121
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ ATV+ + G + F GI +E + +G +PLPPYI K R YQT
Sbjct: 122 HPIMTATVVGELEHGGRYIEFHYDGIFMEL-LDKLGEMPLPPYIKEKLADQER----YQT 176
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
Y+K+ GS AAPTAGLH+T LL ++ + G++ +TLHVG GTF PV+ E+ +DH MHS
Sbjct: 177 VYSKVDGSAAAPTAGLHWTPELLDKVRAKGVQTVELTLHVGLGTFRPVEEENIEDHKMHS 236
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + A ALN V + GGRI++ GTTS+R LET ++ +G + SG+T+IFI PGY
Sbjct: 237 EFYQLSQEAADALNQVHANGGRIIATGTTSIRTLETIGSKFNGHLQADSGWTDIFIKPGY 296
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
+ VD ++NFHLPKSTL+MLV+AF G + YQHA+ YRF+S+GD +F KR
Sbjct: 297 HWTTVDAFITNFHLPKSTLVMLVAAFTGRDNILNAYQHAVDDKYRFFSFGDA--MFIKR 353
>gi|256819029|ref|YP_003140308.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Capnocytophaga ochracea DSM 7271]
gi|256580612|gb|ACU91747.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Capnocytophaga ochracea DSM 7271]
Length = 349
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 142/359 (39%), Positives = 200/359 (55%), Gaps = 12/359 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F+F+LP +A P RD ARLMV+H I L D+ + + D V
Sbjct: 1 MKLSNFNFELPKELLAEYPSENRDEARLMVIHRKTGE---IEHRLFKDVIDYFDDGDVFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKV A+L G + + + E+ + W V P++ I+ G+ L+F
Sbjct: 58 LNNTKVFPARLYGNK--EKTKAKIEVFLLRELSAEQRLWDVLVDPARKIRIGNKLYF--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ L A VID + L F G E + ++ +G PLP YI+R P++ D
Sbjct: 113 GKNAELVAEVIDNTTSRGRTLRFLYDGTYEEFRQHLTELGQTPLPKYISR--PVEPEDEE 170
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YAK +G+VAAPTAGLHF+ +L+ RL GI VTLHVG GTF PV+VED H
Sbjct: 171 RYQTIYAKYEGAVAAPTAGLHFSKHLMKRLEIKGITFSEVTLHVGLGTFNPVEVEDLSKH 230
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
M SE I + +N+ K R+ +VGTT +R+LE++ + DG +NP+ G+TN FI
Sbjct: 231 KMDSEEIHIPESQTKIINAAKVNKKRVCAVGTTVMRVLESSVSSDGFLNPFDGWTNKFIF 290
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
P Y F + +++NFH PKSTLLM+VSAF G + + Y+ A+ Y+FYSYGD L+
Sbjct: 291 PPYDFSIANAMITNFHTPKSTLLMMVSAFAGHDLIMRAYKEAVEQKYKFYSYGDAMLIL 349
>gi|46576964|sp|Q7WMM7|QUEA_BORBR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
Length = 347
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 145/356 (40%), Positives = 203/356 (57%), Gaps = 24/356 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FD+ LPP IA P R +RL+ +L + D DL L +D +V
Sbjct: 5 LTLADFDYHLPPELIAQSPAAERGGSRLL----HLDAASRLHDRRFPDLAGLLRPHDLLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + ++ + +P+ V+ R SK G L
Sbjct: 61 FNDTRVIKARLTGQKAT-----GGKVEVLVERITAPDRALVHVRASKSPGPGMRLRLAEA 115
Query: 121 DGQSRLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
EA V+ + GE+ L F ++L + G PLPPYI DA D
Sbjct: 116 -----FEAEVLGR--EGELFDLRFPAPVLDL---LDAHGATPLPPYITHA--ADATDERR 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ G+VAAPTAGLHF +L +L + G++ FVTLHVGAGTF PV+V++ +HI
Sbjct: 164 YQTVYAREPGAVAAPTAGLHFDQPMLEQLAAQGVQRAFVTLHVGAGTFQPVRVQNLAEHI 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFI 297
MH+E + T A+ ++ GGRIV+VGTTS+R LE+A +DG + G T +FI
Sbjct: 224 MHAEWYTVPEATVAAIARARAHGGRIVAVGTTSVRALESAAAQAQDGPLAAAQGDTRLFI 283
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
TPGYR+R VD L++NFHLP+STLLMLVSA G+ ++ Y HA++ YRF+SYGD
Sbjct: 284 TPGYRYRIVDALLTNFHLPQSTLLMLVSALAGVAPIRRAYAHAVAERYRFFSYGDA 339
>gi|116494314|ref|YP_806048.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Lactobacillus casei ATCC 334]
gi|239629700|ref|ZP_04672731.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus paracasei subsp. paracasei 8700:2]
gi|116104464|gb|ABJ69606.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Lactobacillus casei ATCC 334]
gi|239528386|gb|EEQ67387.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus paracasei subsp. paracasei 8700:2]
Length = 356
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 141/356 (39%), Positives = 205/356 (57%), Gaps = 17/356 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FD+DLP IA P+ RD++RL+V++ + D D+ + DA+V N
Sbjct: 17 LSDFDYDLPHELIAQTPLKERDASRLLVLNSETGE---MQDKHFYDILDYFKPGDALVMN 73
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+V+ A+L GV+ + L S + W +P++ G ++ F G
Sbjct: 74 DTRVMPARLYGVK----PETGAHMEVLLLNNTSGDDWETLMKPARKAPVGTVIDF----G 125
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
L+ATV + G ++ F GI +E + +G PLPPYI K D YQT
Sbjct: 126 DGLLKATVTKELEHGGRMIHFDYDGIFME-ILDKLGETPLPPYIKEK----LEDPEMYQT 180
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
Y+K GS AAPTAGLH+T +LL ++ G+K+ ++TLHVG GTF PV E+ + H MHS
Sbjct: 181 VYSKELGSAAAPTAGLHWTKDLLKKVQEKGVKLVYLTLHVGLGTFRPVVEENIEAHKMHS 240
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + A LN V+ GGRI++ GTTS+R LE T+ DG I SG+T+IFI PGY
Sbjct: 241 EFYRLTPEAAATLNDVRDNGGRIIATGTTSIRTLEAIGTKFDGAIKADSGWTDIFIKPGY 300
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+++ VD ++NFHLPKSTL+MLV+AF G + Y+HAI YRF+S+GD ++
Sbjct: 301 QWKVVDAFITNFHLPKSTLVMLVAAFTGRDTILNAYKHAIDEKYRFFSFGDAMFIY 356
>gi|213962211|ref|ZP_03390475.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Capnocytophaga sputigena Capno]
gi|213955217|gb|EEB66535.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Capnocytophaga sputigena Capno]
Length = 349
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 143/359 (39%), Positives = 199/359 (55%), Gaps = 12/359 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F+FDLP +A P RD ARLMVVH I L D+ + + D V
Sbjct: 1 MKLSNFNFDLPKELLAEYPSENRDEARLMVVHRKTG---EIEHKLFKDVIDYFDDGDVFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKV A+L G + + + E+ + W V P++ I+ G+ L+F
Sbjct: 58 LNNTKVFPARLYGNK--EKTKAKIEVFLLRELSAEQRLWDVLVDPARKIRIGNKLYF--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ L A VID + L F G E + ++ +G PLP YI+R P++ D
Sbjct: 113 GKNAELVAEVIDNTTSRGRTLRFLYDGTYEEFRQHLTELGQTPLPKYISR--PVEPEDEE 170
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YAK +G+VAAPTAGLHF+ +L+ RL GI VTLHVG GTF PV+VED H
Sbjct: 171 RYQTIYAKHEGAVAAPTAGLHFSKHLMKRLEIKGITFAEVTLHVGLGTFNPVEVEDLSKH 230
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
M SE I + +N+ K R+ +VGTT +R+LE++ + D +NP+ G+TN FI
Sbjct: 231 KMDSEEIHIPESQTKIINTAKENKKRVCAVGTTVMRVLESSVSSDCFVNPFDGWTNKFIF 290
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
P Y F + +++NFH PKSTLLM+VSAF G + + Y+ A+ Y+FYSYGD L+
Sbjct: 291 PPYDFSVANAMITNFHTPKSTLLMMVSAFAGHDLIMRAYKEAVEQKYKFYSYGDAMLIL 349
>gi|167750837|ref|ZP_02422964.1| hypothetical protein EUBSIR_01820 [Eubacterium siraeum DSM 15702]
gi|167656272|gb|EDS00402.1| hypothetical protein EUBSIR_01820 [Eubacterium siraeum DSM 15702]
Length = 386
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 145/358 (40%), Positives = 202/358 (56%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+ +F +DLP IA P+ PRDS+RLM + I+ ++ +L D +V
Sbjct: 44 MLKSDFYYDLPQELIAQTPLEPRDSSRLMKIDRKSG---KITHDRFYNICDYLEKGDLLV 100
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N++KV A+L GV+ + L ++S N W V +P K +K G + F
Sbjct: 101 LNDSKVFPARLYGVK----QETGAAVQFLLLHQISHNRWEVMVKPGKRLKIGTKVDF--- 153
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A ++D G+ + F+ G + + +G +PLPPYI K +D Y
Sbjct: 154 --SGILTAEIVDYAEGGDRIAEFTYDGDSIFEVLDRIGQMPLPPYITEK----LKDKDRY 207
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
T Y+ GS AAPTAGLHFT N+ ++L G+ FVTLHVG GTF PVK ++ DH M
Sbjct: 208 NTIYSHEVGSAAAPTAGLHFTENVFAKLREKGVDTAFVTLHVGLGTFRPVKEDNILDHKM 267
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED--GIINPWSGFTNIFIT 298
H E I TA + + + RGGR++SVGTTS R LE+A + D G I S T IFI
Sbjct: 268 HVEHYSIPQETADKIKACRERGGRVISVGTTSCRTLESAASLDPNGEIKACSHDTGIFIY 327
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY F+A+D L++NFHLP+STL+MLVSAF G E+T Y AI YRF+S+GD+ ++
Sbjct: 328 PGYEFKAIDGLITNFHLPESTLIMLVSAFLGREKTLNAYNVAIQEKYRFFSFGDSMII 385
>gi|159028722|emb|CAO88194.1| queA [Microcystis aeruginosa PCC 7806]
Length = 365
Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 147/361 (40%), Positives = 200/361 (55%), Gaps = 22/361 (6%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
+D+ LPP IA P PRDS+RL+VV S L I DLP +L D +V N+T+
Sbjct: 10 YDYHLPPELIAQNPAEPRDSSRLLVVDSPNSHNLAI----FRDLPTWLEPGDLLVLNDTR 65
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSR 125
VI A+L G + + L + W +P K K G + F+ + G++
Sbjct: 66 VIPARLFGRKVTG-----APVEILLLEEQDDHRWLSLVKPGKRFKVGSEVLFYPKTGRTE 120
Query: 126 LE-----ATVIDK-WNTGEILLVFSIS-GIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ A VID+ NT LL F G + G IP PPY+ + R
Sbjct: 121 DKEKLWLAKVIDRDLNTSGRLLEFQRRPGRSFWDMLEEYGHIPFPPYVTESEAEEDR--- 177
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y QGSVAAPTAGLHFT L +L GI ++TLHVG GTF PV+VE+ +H
Sbjct: 178 -YQTVYGNKQGSVAAPTAGLHFTPELFHKLAQKGIDTTYITLHVGVGTFRPVEVENITEH 236
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIF 296
+MH E I A TA+ + K+RGGR+++VGTT R LE A T+ + + G TN+F
Sbjct: 237 LMHREFLEISAETAEKIAQTKARGGRVIAVGTTVARALEGAIKETKSDKLTAFQGKTNLF 296
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ PGY++R +D +++NFHLPKS+L+MLVSA G E +YQ AI +RFYS+GD L+
Sbjct: 297 VYPGYQWRVIDGMITNFHLPKSSLMMLVSALVGRERLLALYQAAIQERFRFYSFGDAMLI 356
Query: 357 F 357
Sbjct: 357 L 357
>gi|227825068|ref|ZP_03989900.1| S-adenosylmethionine-tRNA-ribosyltransferase-isomerase
[Acidaminococcus sp. D21]
gi|226905567|gb|EEH91485.1| S-adenosylmethionine-tRNA-ribosyltransferase-isomerase
[Acidaminococcus sp. D21]
Length = 339
Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 139/356 (39%), Positives = 199/356 (55%), Gaps = 19/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD+DLP IA P+ PRD++RL+V+ + +LP +L D +V
Sbjct: 1 MEVTDFDYDLPKELIAQTPIEPRDASRLLVMDKKTGA---LEHRHFYNLPEYLRPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+V+ A+L+G + + + L R + W V +P K +++G + F
Sbjct: 58 FNDTRVMPARLHGTKTTGAH-----VEVFLLTRKNNTDWEVLVKPGKKLQEGAEIIF--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L T+++K + G + F G+ E + +G PLPPYI K +D Y
Sbjct: 110 --SDELSCTILEKTDFGGRIARFRFDGV-FEEILDRLGETPLPPYIHEK----LKDKERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + GS AAPTAGLHFT L+ ++ +G++ FVTL+VG GTF PV E +DH M
Sbjct: 163 QTVYNRELGSAAAPTAGLHFTKELMQKIKEMGVEEVFVTLNVGLGTFRPVSEERIEDHEM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A ALN K G RI++VGTTS+R LE+A G + P +T IFI PG
Sbjct: 223 HSEFYTVSPEAAAALNRAKKEGRRIIAVGTTSVRTLESAGA-SGTMVPGGNWTKIFIYPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
++F VD L++NFHLP+STL+MLVSA E Y A+ YRF+S+GD +
Sbjct: 282 FKFHFVDALVTNFHLPQSTLIMLVSALSSRENILHAYGEAVKEKYRFFSFGDAMFI 337
>gi|223937431|ref|ZP_03629336.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [bacterium
Ellin514]
gi|223893982|gb|EEF60438.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [bacterium
Ellin514]
Length = 358
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 156/365 (42%), Positives = 202/365 (55%), Gaps = 17/365 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LPP IA P RD +RL+V+ N + I+ D+ FL D +V
Sbjct: 1 MRTSDFDFALPPELIAQAPTATRDQSRLLVLKRNTA---EIAHRKFRDVLEFLKPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN++VI A+L + R + L + N W V RP K + G L F +
Sbjct: 58 LNNSRVIPARLRALN----ARTNGQFEVLLLEEHATNDWWVMMRPGKRARIGTELVFRDK 113
Query: 121 DGQ-SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID-ARDYV 178
G + + A+VID G + F+ + +E + +G IPLPPYI R A D +
Sbjct: 114 TGVVAHIRASVIDTNPEGHRRIHFTGTPNIIE-NLDALGEIPLPPYIERNSDKGLAEDDI 172
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YAK GSVAAPTAGLHFT LL + S GI++ FVTLHVG GTF PVK E +H
Sbjct: 173 RYQTVYAKPAGSVAAPTAGLHFTDELLHEIRSRGIQICFVTLHVGLGTFAPVKAETLSEH 232
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFI 297
+MH E + A TAQ + + K G RI++VGTTS+R+LE+ A G + G T IFI
Sbjct: 233 VMHEERYELSAETAQTITTAKHAGRRIIAVGTTSVRVLESVAAQHHGKLIAGKGRTRIFI 292
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFC------GIEETKKMYQHAISHAYRFYSYG 351
P Y F VD+L++NFHLP STLLMLVSAF G E Y A+ YRF+SYG
Sbjct: 293 HPPYSFSVVDVLLTNFHLPCSTLLMLVSAFAAPGEMRGREIVLAAYAEAVREKYRFFSYG 352
Query: 352 DTSLL 356
D L+
Sbjct: 353 DAMLV 357
>gi|297566044|ref|YP_003685016.1| S-adenosylmethionine/ tRNA-ribosyltransferase-isomerase
[Meiothermus silvanus DSM 9946]
gi|296850493|gb|ADH63508.1| S-adenosylmethionine/ tRNA-ribosyltransferase-isomerase
[Meiothermus silvanus DSM 9946]
Length = 338
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 156/363 (42%), Positives = 208/363 (57%), Gaps = 31/363 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++++D+ LPP+ IA PRDS+RLMVVH + + D+ +L D +V
Sbjct: 1 MPLEDYDYSLPPALIAQSGAEPRDSSRLMVVHRGTGQ---LEHRIFRDITEYLRPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N +KVI A R N I L + P+ W +P+K K L F
Sbjct: 58 LNQSKVIPA-----RTFATNAHGTRIEVLLVRELKPDLWEAMLKPAKRAK--GWLRF--A 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVD 179
DG L A V+ + G +L F+ E LER +G PLPPYI ID + Y
Sbjct: 109 DG---LMAEVVKVEDDGTRVLHFTGGVWEHLER----IGKTPLPPYIHAS--IDPQRY-- 157
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
QT YAK GSVAAPTAGLHFT LL R+ +G++++FVTLHVG GTF PV+ ED D H+
Sbjct: 158 -QTVYAKTPGSVAAPTAGLHFTPQLLQRIYEMGVELHFVTLHVGPGTFKPVQ-EDPDRHL 215
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-----TTEDGIINPWSGFTN 294
MH E I TAQA+N K+ G RI++VGTT +R LE+A ++ G + G T
Sbjct: 216 MHLEPYEIPPETAQAVNQAKAEGRRIIAVGTTVVRTLESAWENSLSSASGRVRAGVGETR 275
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
+FI PG++F+ +D L++NFHLPKSTLLMLVSAF G + T + Y+ A+ YRFYS GD
Sbjct: 276 LFIRPGFKFKVIDALITNFHLPKSTLLMLVSAFTGYDLTMRAYRMAVEERYRFYSLGDAM 335
Query: 355 LLF 357
L+
Sbjct: 336 LIL 338
>gi|74318092|ref|YP_315832.1| queuosine biosynthesis protein [Thiobacillus denitrificans ATCC
25259]
gi|91207332|sp|Q3SH62|QUEA_THIDA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|74057587|gb|AAZ98027.1| queuosine biosynthesis protein [Thiobacillus denitrificans ATCC
25259]
Length = 344
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 151/367 (41%), Positives = 202/367 (55%), Gaps = 43/367 (11%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDF+LPP IA P R ++RL+ +++ + D + +LP L ++D +V
Sbjct: 1 MRVADFDFELPPDLIAQFPPDVRGASRLL----HVTAAGALHDRMFRELPTLLGADDLLV 56
Query: 61 FNNTKVITAQLNGVRFCH------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
N+T+VI A+L G + + R E +R S +P I+ D
Sbjct: 57 MNDTRVIKARLFGEKDSGGRVELLVERVTGEFEALAFIRASHAP-----KPGARIRLADD 111
Query: 115 LHFFSQDGQSRLE-----ATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARK 169
+ D Q L A V+D + G +PLPPYI
Sbjct: 112 VALDVLDKQHDLTRLHFPAPVLDVLDR--------------------CGRLPLPPYIEHA 151
Query: 170 RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
P + D YQT YA G+VAAPTAGLHF + +L L + G++ VTLHVGAGTF P
Sbjct: 152 -PTE-EDEARYQTVYANEPGAVAAPTAGLHFDAAMLGTLQTQGVRTARVTLHVGAGTFQP 209
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPW 289
V+V + DH+MHSE + A T A+ ++RGGR+V+VGTTSLR LE A+ G +
Sbjct: 210 VRVAEVADHVMHSERYTVPAATVAAIAETRARGGRVVAVGTTSLRALEAASAS-GSVEAG 268
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
G T IFITPGYRFR VD L++NFHLP+STLLMLVSAF GIE ++ Y HAI+ YRF+S
Sbjct: 269 VGETAIFITPGYRFRTVDALVTNFHLPRSTLLMLVSAFSGIETIRRAYAHAIAERYRFFS 328
Query: 350 YGDTSLL 356
YGD L
Sbjct: 329 YGDAMFL 335
>gi|118586983|ref|ZP_01544415.1| S-adenosylmethionine tRNA-ribosyltransferase [Oenococcus oeni ATCC
BAA-1163]
gi|118432605|gb|EAV39339.1| S-adenosylmethionine tRNA-ribosyltransferase [Oenococcus oeni ATCC
BAA-1163]
Length = 359
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 139/362 (38%), Positives = 209/362 (57%), Gaps = 19/362 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FD+DLP IA P+ RD++RL++++ D D+ +LN DA+V N
Sbjct: 11 LSDFDYDLPHELIAQTPLKQRDTSRLLLLNAKTGA---YEDKHFYDIIDYLNPGDALVMN 67
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
N++VI A+L+G R + + L + + W +P+K G ++ F +++
Sbjct: 68 NSRVIPARLHGWR----PETKGHVEVLLLRQDHGDVWETLIKPAKKFPVGSVIDFGNEN- 122
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
++ + V+ + G + F GI +E + +G +PLPPYI K +D YQT
Sbjct: 123 ETIMTGKVVGELEHGGRYVEFQYDGIFMEL-LDKLGEMPLPPYIKEK----LKDQERYQT 177
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
Y+KI+GS AAPTAGLH+T LL ++ + GIK +TLHVG GTF PV+ E+ D H MHS
Sbjct: 178 VYSKIEGSAAAPTAGLHWTPELLDKVRAKGIKTIELTLHVGLGTFRPVEEENIDKHKMHS 237
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET------ATTEDGIINPWSGFTNIF 296
E + A +N V++ GGRIV+ GTT++R LET G + SG+T+IF
Sbjct: 238 EFYQLSQAAADQINQVRNNGGRIVATGTTTIRTLETIGHKFNGDKYGGNVQADSGWTDIF 297
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PG+++ VD ++NFHLPKSTL+MLV+AF G E Y+HAI YRF+S+GD +
Sbjct: 298 IKPGFKWTTVDAFITNFHLPKSTLVMLVAAFTGRENILNAYKHAIQEKYRFFSFGDAMFI 357
Query: 357 FQ 358
+
Sbjct: 358 HK 359
>gi|320528164|ref|ZP_08029329.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Solobacterium moorei F0204]
gi|320131512|gb|EFW24077.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Solobacterium moorei F0204]
Length = 345
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 135/352 (38%), Positives = 204/352 (57%), Gaps = 16/352 (4%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+FD++LP IA P+ R S+R++V+H + D D+ +L++ D +V NNT
Sbjct: 7 DFDYNLPEELIAQTPLLDRSSSRMLVIH---NTEKKYEDKHFYDIVDYLHAGDVLVRNNT 63
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQS 124
+VI A+L G + + L ++ + W +KV+K G I+ F DG+
Sbjct: 64 RVIPARLFGTK----EETGAHVELLLLRQLPDDVWECLVGNAKVVKLGTIISF--HDGRL 117
Query: 125 RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTY 184
R E I + ++ +++ GI + +G +PLPPYI K D YQT Y
Sbjct: 118 RAECVEIGEKGLRKMRMIYD--GI-FNEILDELGNVPLPPYIKEK----LNDPERYQTVY 170
Query: 185 AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEI 244
AK++GS AAPTAGLHFT + ++L G+ V VTLHVG TF P+ ED +DH MHSE+
Sbjct: 171 AKVRGSAAAPTAGLHFTDEIFTKLKEKGVTVIDVTLHVGLSTFRPMDTEDVEDHDMHSEV 230
Query: 245 GFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFR 304
++ A LN+ K+ G RI ++GTTS+R LE+ G SG T +FI PGY++
Sbjct: 231 YYMSKEAADTLNAAKANGQRIFAIGTTSVRTLESVWNRFGKFEECSGETKLFIYPGYQWH 290
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+D +++NFHLPKSTL+M++++F G E T + Y+HA+ YRF+S+GD L+
Sbjct: 291 TIDGMLTNFHLPKSTLIMMIASFVGYEFTLEAYRHAVQEKYRFFSFGDCMLI 342
>gi|320334668|ref|YP_004171379.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase [Deinococcus
maricopensis DSM 21211]
gi|319755957|gb|ADV67714.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase [Deinococcus
maricopensis DSM 21211]
Length = 354
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 149/356 (41%), Positives = 205/356 (57%), Gaps = 27/356 (7%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDLPP RIA PRD++RLMVV + I + DLP L + D +VFN
Sbjct: 20 LARLNFDLPPERIAQTGAEPRDTSRLMVVGES-----GIDHRIFRDLPDLLRTGDLLVFN 74
Query: 63 NTKVITAQLNGVRFCHINRREK--EISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
++VI A++ I R+ + L N WS Y + +K + G L F S
Sbjct: 75 ESRVIPARI-------IARKPTGGAVETLLLREEEANVWSAYLKGAK--RAGRDLLFGS- 124
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A VI G LL FS +++ + +G +PLPPYI DA Y
Sbjct: 125 -----VHAEVIGTLEDGARLLRFSE---DIKPHLDALGRLPLPPYIDAGED-DAVWQDRY 175
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GSVAAPTAGLHFT LL+RL ++G+ FVTLHVGAGTF P+ +H M
Sbjct: 176 QTVYARTAGSVAAPTAGLHFTPELLARLQAMGVGTAFVTLHVGAGTFKPIS-GSVAEHTM 234
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + + TA A+N+ + G R+++VGTT++R LE+A +G ++P G T IFITPG
Sbjct: 235 HAERYTVTSDTADAINAARREGRRVIAVGTTTVRALESAADVNGTVHPGDGDTRIFITPG 294
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ +R D+L++N HLP STLL+LV+AF G + + YQ A+ H YRFYS GD LL
Sbjct: 295 HAWRVPDLLITNLHLPNSTLLLLVAAFAGEDRIRAAYQAALDHPYRFYSLGDAMLL 350
>gi|227484944|ref|ZP_03915260.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Anaerococcus lactolyticus ATCC 51172]
gi|227237099|gb|EEI87114.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Anaerococcus lactolyticus ATCC 51172]
Length = 340
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 142/352 (40%), Positives = 202/352 (57%), Gaps = 17/352 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M EFD+ LP IA P RD AR+MV+ D ++ +L + D +V
Sbjct: 1 MRTSEFDYYLPEELIAQHPTSKRDEARMMVLDRKSGER---EDKYFFEIIDYLKAGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L F H +E++I L W V RP K +K G + FS
Sbjct: 58 MNDTRVIPARL----FGHRPEKEEKIEVFLLNNTEGAKWEVLVRPGKKMKIGTEV-IFSD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D L V+D + G ++ F GI + +G +PLPPYI K +D DY
Sbjct: 113 D----LSCKVVDVKDDGNRIVEFYYEGI-FNEILDRLGNMPLPPYIKEK----LKDNEDY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GSVAAPTAGLHFT LL ++ G+K+ ++TL+VG GTF PV ++ +H M
Sbjct: 164 QTVYSKNPGSVAAPTAGLHFTKELLEKIEEKGVKLAYLTLNVGLGTFRPVNEDEITNHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + T++ LN KS G RI++VGTTS+R LE+ ++ I SG+T+IFI PG
Sbjct: 224 HSEFYTLSEETSKILNEAKSEGRRIIAVGTTSIRTLESVYKKNNKICADSGWTDIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+ F+ VD +++NFHLPKSTL+ML++AF + Y+ A++ YRF+S+GD
Sbjct: 284 FEFKVVDAIITNFHLPKSTLIMLIAAFTSKDIILDAYKDAVNKKYRFFSFGD 335
>gi|254513957|ref|ZP_05126018.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [gamma
proteobacterium NOR5-3]
gi|219676200|gb|EED32565.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [gamma
proteobacterium NOR5-3]
Length = 352
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 145/363 (39%), Positives = 210/363 (57%), Gaps = 27/363 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F ++LP IA +P+ R ++RL+ V S ++ H +DLPA LN++D +V
Sbjct: 1 MQRSDFTYELPQELIAQQPLAERSASRLLCVDGRTS--EMVHRHF-ADLPALLNADDLLV 57
Query: 61 FNNTKVITAQLNGVRFCH------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
FN+T+V+ A+L GV+ I R E S H+R S K + G
Sbjct: 58 FNDTRVLPARLYGVKETGGRVEILIERLTGETSALAHIRAS-----------KTPRAGQA 106
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPID 173
+ ++ + V + GE+ F IS + L ++ +G +PLPPYI R I+
Sbjct: 107 IALAAESDSPATDLQVRVEGREGEL---FQISSAQALGPMLARIGHMPLPPYIDRTDAIE 163
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
R+ YQT YA+ G+VAAPTAGLHF + LL L +G++ VTLHVGAGTF PV+ +
Sbjct: 164 DRER--YQTVYAQRDGAVAAPTAGLHFDNALLQTLDEMGVRRAHVTLHVGAGTFQPVRSD 221
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
D +H MH+E ++ A+ + + GGR+V+VGTT++R LETA G + P+ G T
Sbjct: 222 DIREHQMHAEYLEVNQSVCDAIAATRECGGRVVAVGTTAVRSLETAAAT-GQLAPYVGDT 280
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+FI PGY F+ VD +++NFHLP+STLLMLVSAFCG + Y A++ YRF+SYGD
Sbjct: 281 RLFIYPGYAFQCVDAMITNFHLPESTLLMLVSAFCGRDLMLDAYNAAVAERYRFFSYGDA 340
Query: 354 SLL 356
L
Sbjct: 341 MFL 343
>gi|75910998|ref|YP_325294.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Anabaena
variabilis ATCC 29413]
gi|91207412|sp|Q3M3N7|QUEA_ANAVT RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|75704723|gb|ABA24399.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Anabaena
variabilis ATCC 29413]
Length = 408
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 154/380 (40%), Positives = 203/380 (53%), Gaps = 38/380 (10%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLV-SDLPAFLNSNDAIVFNNT 64
+D+ LPP RIA P PRDS+RL+VV+ + H + DLP L D ++ NNT
Sbjct: 30 YDYVLPPERIAQNPAVPRDSSRLLVVNSQTTGKETPPLHQIFRDLPDILRPGDLLIMNNT 89
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF------- 117
KVI A+L G + E+ L N W +P K KKG + F
Sbjct: 90 KVIPARLYGRKSSG-----AEVEILLLEERKFNCWLALVKPGKRFKKGTQIIFEGLGIRN 144
Query: 118 ----------FSQDG--------QSRLEATVI--DKWNTGEILLVFSISGIELERQISLV 157
S +G +L ATV+ DK G +L G L + +
Sbjct: 145 LGIKNSPHYPLSPEGFPPSPVPNPHQLTATVLETDKATGGRLLQFDLPEGESLVQLLDKF 204
Query: 158 GTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYF 217
G IPLPPYI + D + YQT YA+ G++AAPTAGLHFT LL +L I F
Sbjct: 205 GEIPLPPYITASQAADEQ----YQTVYAEQPGAIAAPTAGLHFTPELLEKLRDRNINQAF 260
Query: 218 VTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE 277
+TLHVG GTF PV+VED H MH E I A T + + K+ GGRI++VGTT +R LE
Sbjct: 261 ITLHVGVGTFRPVEVEDVATHQMHEEWIEIPAATVAQIKATKAAGGRIIAVGTTVVRALE 320
Query: 278 TATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMY 337
A G + + G TN+FI PGY+++ V+ L++NFHLP+S+LLMLVSA G E +Y
Sbjct: 321 GAAA-SGDLQEFCGKTNLFIYPGYKWQVVEGLITNFHLPRSSLLMLVSALIGRERLLNIY 379
Query: 338 QHAISHAYRFYSYGDTSLLF 357
Q AI+ YRFYS+GD L+
Sbjct: 380 QEAIASQYRFYSFGDAMLIL 399
>gi|223985620|ref|ZP_03635671.1| hypothetical protein HOLDEFILI_02977 [Holdemania filiformis DSM
12042]
gi|223962435|gb|EEF66896.1| hypothetical protein HOLDEFILI_02977 [Holdemania filiformis DSM
12042]
Length = 340
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 146/359 (40%), Positives = 202/359 (56%), Gaps = 23/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M EFDF+LP IA P+ R ++RL+V+H + I D+ +L D +V
Sbjct: 1 MKTSEFDFELPQELIAQTPLAKRSASRLLVLHRSTGA---IEHRHFYDIVDYLKPGDVLV 57
Query: 61 FNNTKVITAQLNGVR---FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
NNT+VI A+L G + H+ L +R + W +KV+K G I+ F
Sbjct: 58 RNNTRVIPARLFGTKEGTGAHVE--------LLLLRQEGDEWECLVGNAKVVKLGTIISF 109
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+G+ + E I + + +++ GI E + +G +PLPPYI K D
Sbjct: 110 --NEGELKAECIGIGEKGLRQFRMIYD--GIFYE-ILEKLGNVPLPPYIKEK----LNDP 160
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YAK++GS AAPTAGLHFT L +L + G++V +TLHVG GTF P+ ED D
Sbjct: 161 ERYQTVYAKVKGSAAAPTAGLHFTPELFDQLKAKGVEVEDITLHVGLGTFRPMDTEDIAD 220
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MHSE +D TA LN K+ G RI++VGTTS R LE ++ G T+IFI
Sbjct: 221 HHMHSEFFMMDQATADRLNQAKAEGRRIIAVGTTSCRTLEAIMSKYGEFRECHEDTDIFI 280
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY F+A+D L++NFHLPKSTL+MLVSAF ++ YQ AI YRF+S+GD+ +
Sbjct: 281 FPGYSFQAIDGLITNFHLPKSTLVMLVSAFATKDQIMTAYQAAIDEKYRFFSFGDSMFI 339
>gi|33595821|ref|NP_883464.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bordetella
parapertussis 12822]
gi|33565900|emb|CAE36448.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bordetella
parapertussis]
Length = 357
Score = 249 bits (636), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 144/356 (40%), Positives = 202/356 (56%), Gaps = 24/356 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FD+ LPP IA P R +RL+ +L + D DL L +D +V
Sbjct: 15 LTLADFDYHLPPELIAQSPAAERGGSRLL----HLDAASRLHDRRFPDLAGLLRPHDLLV 70
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + ++ + +P+ + R SK G L
Sbjct: 71 FNDTRVIKARLTGQKAT-----GGKVEVLVERITAPDRALAHVRASKSPGPGMRLRLAEA 125
Query: 121 DGQSRLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
EA V+ + GE+ L F ++L + G PLPPYI DA D
Sbjct: 126 -----FEAEVLGR--EGELFDLRFPAPVLDL---LDAHGATPLPPYITHA--ADATDERR 173
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ G+VAAPTAGLHF +L +L + G++ FVTLHVGAGTF PV+V++ +HI
Sbjct: 174 YQTVYAREPGAVAAPTAGLHFDQPMLEQLAAQGVQRAFVTLHVGAGTFQPVRVQNLAEHI 233
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFI 297
MH+E + T A+ ++ GGRIV+VGTTS+R LE+A +DG + G T +FI
Sbjct: 234 MHAEWYTVPEATVAAIARARAHGGRIVAVGTTSVRALESAAAQAQDGPLAAAQGDTRLFI 293
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
TPGYR+R VD L++NFHLP+STLLMLVSA G+ ++ Y HA++ YRF+SYGD
Sbjct: 294 TPGYRYRIVDALLTNFHLPQSTLLMLVSALAGVAPIRRAYAHAVAERYRFFSYGDA 349
>gi|124268920|ref|YP_001022924.1| putative queuosine S-adenosylmethionine:tRNA
ribosyltransferase-isomerase [Methylibium petroleiphilum
PM1]
gi|124261695|gb|ABM96689.1| putative queuosine S-adenosylmethionine:tRNA
ribosyltransferase-isomerase [Methylibium petroleiphilum
PM1]
Length = 355
Score = 249 bits (636), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 155/366 (42%), Positives = 211/366 (57%), Gaps = 25/366 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ V +FDF LPP IA P R +RL+ + PL D +LP+ L+ D +V
Sbjct: 9 LTVADFDFALPPELIAQHPAPERSGSRLLDGRGD--APL---DRRFRELPSLLSPGDLLV 63
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYA--RPSKVIKKGDILHFF 118
FN+T+VI A+L G + L RV P + V+A R SK + G +HF
Sbjct: 64 FNDTRVIKARLYG------RKASGGGVEALVERVLPGTHEVWAHLRASKSPRPGSRVHFA 117
Query: 119 SQDGQS-RLEATVIDKWNTGEILLVFSISGIE---LERQISLVGTIPLPPYIARKRPIDA 174
+DG S +A V+ + L + G LER G +PLPPYI + DA
Sbjct: 118 GRDGGSTAFDAEVLGRCGPDGSLFHLRLPGDPFALLERH----GHVPLPPYI--EHGDDA 171
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D YQT +A+ G+VAAPTA LHF + +L+ L + G+ VTLHVGAGTF PV+VE
Sbjct: 172 DDERRYQTVFARAPGAVAAPTAALHFDAEVLAALEAQGVARASVTLHVGAGTFQPVRVEQ 231
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
+H MHSE + T A+ ++ GGR+V+VGTT+LR LE+A G + + T+
Sbjct: 232 LAEHRMHSEWFELPGATVDAIARTRAAGGRVVAVGTTTLRALESAAL-GGELQAGARETD 290
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFITPG+ FR VD L++NFHLP+STL+MLVSAF G E + +Y HAI YRF+SYGD +
Sbjct: 291 IFITPGFTFRVVDRLLTNFHLPRSTLMMLVSAFAGHERIRTLYTHAIRERYRFFSYGD-A 349
Query: 355 LLFQKR 360
+L Q+R
Sbjct: 350 MLLQRR 355
>gi|254411962|ref|ZP_05025737.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Microcoleus
chthonoplastes PCC 7420]
gi|196180928|gb|EDX75917.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Microcoleus
chthonoplastes PCC 7420]
Length = 386
Score = 249 bits (636), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 150/385 (38%), Positives = 205/385 (53%), Gaps = 42/385 (10%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+++ +++DLP RIA P+ PRDS+RL+VV P + DLP L S D +V
Sbjct: 10 LLLSSYNYDLPEGRIAQTPISPRDSSRLLVVE----SPTQHQHRIFRDLPQLLRSGDLLV 65
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF--- 117
NNT+VI A+L G + + L N W +P + +K G + F
Sbjct: 66 LNNTRVIPARLYGRKVTG-----TPVEVLLLEEREQNCWLALVKPGRRLKVGSTIVFEPD 120
Query: 118 --------------------FSQDG---QSRLEATVI--DKWNTGEILLVFSISGIELER 152
QD +S L+AT+I D +G +L G L
Sbjct: 121 QPIVPASYGKTPLSSDDTETLRQDNLKNRSPLKATIIARDDATSGRLLQFDLPKGQSLVT 180
Query: 153 QISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIG 212
+ G +P PPYI + + YQT YA+I G+VAAPTAGLHFT LL + G
Sbjct: 181 LLPNYGQVPFPPYITHSQATPDQ----YQTVYAQIPGAVAAPTAGLHFTPELLEQCHISG 236
Query: 213 IKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTS 272
I+ +TLHVG GTF PV+VED +H MH E I A T + K+ GGR+++VGTT
Sbjct: 237 IEQASITLHVGVGTFRPVEVEDVTNHQMHGEWLEISAATVAQIQQTKAAGGRVIAVGTTV 296
Query: 273 LRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEE 332
+R LE A +G P+ G T +FI PGY+++ VD L++NFHLP+STLLMLVSA G E
Sbjct: 297 VRALEGAAA-NGEFQPYCGKTELFIYPGYQWQVVDGLITNFHLPRSTLLMLVSALIGRER 355
Query: 333 TKKMYQHAISHAYRFYSYGDTSLLF 357
K+Y AI++ YRFYS+GD L+
Sbjct: 356 LLKLYAEAIAYNYRFYSFGDAMLIL 380
>gi|262038069|ref|ZP_06011474.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Leptotrichia goodfellowii F0264]
gi|261747889|gb|EEY35323.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Leptotrichia goodfellowii F0264]
Length = 340
Score = 249 bits (636), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 143/357 (40%), Positives = 205/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EFDFDLP IA V PRD ++L+V++ I ++ +L +D +V
Sbjct: 1 MNIAEFDFDLPEELIAQHAVNPRDHSKLLVLNKEKKE---IEHKRFYNIIDYLKKDDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKVI A+L G + + C L R +W V +P+K +K G + F
Sbjct: 58 INRTKVIPARLYGRKDTGTV-----LECFLLKRYDLYTWEVLLKPAKRLKIGQKIVF--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
++ LEA +I+ + G +L F+ G E + +G +PLPPYI K D Y
Sbjct: 110 -SENMLEAELIEIKSDGNRVLKFNYKG-NFEEILDKLGEMPLPPYITEK----LEDKDRY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK SVAAPTAGLHFT LL ++ GI + V L VG GTF PV+ E+ +HIM
Sbjct: 164 QTVYAKEGESVAAPTAGLHFTEELLEKIKEKGIIIAEVFLDVGLGTFRPVQTENIHEHIM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ TA+ +N+ K +G R+++VGTTS+R LE++ E G + T+IFI
Sbjct: 224 HSEKYWVPKETAEIVNNAKRKGNRVIAVGTTSVRTLESSVNEKGELIENESETSIFIYGD 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ VD +++NFHLPKSTL+ML+SAF G E Y+ A+ YRFYS+GD+ ++
Sbjct: 284 YKFKIVDAIITNFHLPKSTLIMLISAFGGKEFVFSAYEEAVREKYRFYSFGDSMFIY 340
>gi|148263777|ref|YP_001230483.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Geobacter
uraniireducens Rf4]
gi|189038524|sp|A5GEQ5|QUEA_GEOUR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|146397277|gb|ABQ25910.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Geobacter
uraniireducens Rf4]
Length = 343
Score = 249 bits (636), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 143/360 (39%), Positives = 211/360 (58%), Gaps = 20/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+ LP IA +P RD++RLM + +++ ++S++ A D +V
Sbjct: 1 MQLNDFDYYLPTELIAQQPAQNRDASRLMTLD---RVNGELNETIISEIAALFRDGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G + E+ + W + SK K G ++ S+
Sbjct: 58 INDTRVIPARLLGKKESG---GRVEVFLVRRLLEPGEVWQCLIKASKSPKPGSLI-ILSE 113
Query: 121 DGQSR-LEATVIDKWNTGEILLVFSISGIE--LERQISLVGTIPLPPYIARKRPIDARDY 177
+R LE + +D W S S +E L+R + +G++PLPPYI R D R+
Sbjct: 114 GVVARVLERSELDTW-------AVSFSPVEGFLDR-LERIGSMPLPPYIRRSAGDDDRER 165
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT +A+ +G+VAAPTAGLHFT LL ++ G+++ +TLHVG GTFMPV+V+D D
Sbjct: 166 --YQTVFARAKGAVAAPTAGLHFTDALLQKIRQQGVEIAPLTLHVGLGTFMPVRVDDLKD 223
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH E FI TA+A+N+ K+ GGR+V++GTT+ R LE A +G + P G +IFI
Sbjct: 224 HRMHREYYFIPEATARAVNARKNDGGRVVALGTTTTRALEHAAAGNGSVQPGEGEADIFI 283
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY F+ VD L++NFHLPKSTLLMLVSA G + Y A++ +RF+SYGD ++
Sbjct: 284 CPGYTFKVVDALITNFHLPKSTLLMLVSALAGKDRLFNAYNEAVNRNFRFFSYGDAMFIY 343
>gi|169829376|ref|YP_001699534.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lysinibacillus sphaericus C3-41]
gi|238688195|sp|B1HVA2|QUEA_LYSSC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|168993864|gb|ACA41404.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lysinibacillus sphaericus C3-41]
Length = 346
Score = 249 bits (636), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 149/364 (40%), Positives = 202/364 (55%), Gaps = 22/364 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDF+LP IA P+ R ++RLMVV P + V H L L + D +V
Sbjct: 1 MRVEDFDFELPEELIAQTPLVDRTASRLMVVTPGSNE--VEHQHFAHVLEE-LRTGDCLV 57
Query: 61 FNNTKVITAQLNGVR---FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
N+T+V+ A+L GV+ HI L + W +P+K +K G ++ F
Sbjct: 58 LNDTRVLPARLMGVKEETGAHIE------VLLLKQLPGTDEWETLVKPAKRVKVGTVITF 111
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
G L AT + + G F GI E + +G +PLPPYI K D
Sbjct: 112 ----GDGLLTATCTGELDHGGRTFEFHYDGIFFE-ILEQLGEMPLPPYIREK----LEDK 162
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YAK +GS AAPTAGLHFT LL ++ + G++V F+TLHVG GTF PV V+ ++
Sbjct: 163 DRYQTVYAKERGSAAAPTAGLHFTEELLEQVKAKGVEVVFITLHVGLGTFRPVSVDSIEN 222
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIF 296
H MH+E + A +N VK GG+I++VGTTS R LET ++ DG + G+T+IF
Sbjct: 223 HEMHAEFYSVTEEAADTINRVKRNGGKIIAVGTTSTRTLETIGSKYDGEVRAEQGWTSIF 282
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY F VD L++NFHLPKSTL+MLVS E YQ A+ YRF+S+GD +
Sbjct: 283 IYPGYTFTVVDGLITNFHLPKSTLVMLVSTLATRETILSAYQQAVEEKYRFFSFGDAMFI 342
Query: 357 FQKR 360
K
Sbjct: 343 RPKE 346
>gi|315224422|ref|ZP_07866252.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Capnocytophaga ochracea F0287]
gi|314945625|gb|EFS97644.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Capnocytophaga ochracea F0287]
Length = 349
Score = 249 bits (636), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 142/359 (39%), Positives = 199/359 (55%), Gaps = 12/359 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F+F+LP +A P RD ARLMV+H I L D+ + + D V
Sbjct: 1 MKLSNFNFELPKELLAEYPSENRDEARLMVIHRKTGE---IEHRLFKDVIDYFDDGDVFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKV A+L G + + + E+ + W V P++ I+ G+ L+F
Sbjct: 58 LNNTKVFPARLYGNK--EKTKAKIEVFLLRELSAEQRLWDVLVDPARKIRIGNKLYF--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ L A VID + L F G E + ++ +G PLP YI+R P++ D
Sbjct: 113 GKNAELVAEVIDNTTSRGRTLRFLYDGTYEEFRQHLTELGQTPLPKYISR--PVEPEDEE 170
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YAK +G+VAAPTAGLHF+ +L+ RL GI VTLHVG GTF PV+VED H
Sbjct: 171 RYQTIYAKYEGAVAAPTAGLHFSKHLMKRLEIKGITFAEVTLHVGLGTFNPVEVEDLSKH 230
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
M SE I + +N K R+ +VGTT +R+LE++ + DG +NP+ G+TN FI
Sbjct: 231 KMDSEEIHIPESQTKIINVAKVNKKRVCAVGTTVMRVLESSVSSDGFLNPFDGWTNKFIF 290
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
P Y F + +++NFH PKSTLLM+VSAF G + + Y+ A+ Y+FYSYGD L+
Sbjct: 291 PPYDFSIANAMITNFHTPKSTLLMMVSAFAGHDLIMRAYKEAVEQKYKFYSYGDAMLIL 349
>gi|46576961|sp|Q7WB60|QUEA_BORPA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
Length = 347
Score = 249 bits (636), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 144/356 (40%), Positives = 202/356 (56%), Gaps = 24/356 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FD+ LPP IA P R +RL+ +L + D DL L +D +V
Sbjct: 5 LTLADFDYHLPPELIAQSPAAERGGSRLL----HLDAASRLHDRRFPDLAGLLRPHDLLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + ++ + +P+ + R SK G L
Sbjct: 61 FNDTRVIKARLTGQKAT-----GGKVEVLVERITAPDRALAHVRASKSPGPGMRLRLAEA 115
Query: 121 DGQSRLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
EA V+ + GE+ L F ++L + G PLPPYI DA D
Sbjct: 116 -----FEAEVLGR--EGELFDLRFPAPVLDL---LDAHGATPLPPYITHA--ADATDERR 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ G+VAAPTAGLHF +L +L + G++ FVTLHVGAGTF PV+V++ +HI
Sbjct: 164 YQTVYAREPGAVAAPTAGLHFDQPMLEQLAAQGVQRAFVTLHVGAGTFQPVRVQNLAEHI 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFI 297
MH+E + T A+ ++ GGRIV+VGTTS+R LE+A +DG + G T +FI
Sbjct: 224 MHAEWYTVPEATVAAIARARAHGGRIVAVGTTSVRALESAAAQAQDGPLAAAQGDTRLFI 283
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
TPGYR+R VD L++NFHLP+STLLMLVSA G+ ++ Y HA++ YRF+SYGD
Sbjct: 284 TPGYRYRIVDALLTNFHLPQSTLLMLVSALAGVAPIRRAYAHAVAERYRFFSYGDA 339
>gi|217967988|ref|YP_002353494.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Dictyoglomus turgidum DSM 6724]
gi|217337087|gb|ACK42880.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Dictyoglomus turgidum DSM 6724]
Length = 339
Score = 249 bits (636), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 144/357 (40%), Positives = 206/357 (57%), Gaps = 20/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + ++D+ LP IA P PRDS+RLM+V+ I + ++ +L S D +V
Sbjct: 3 LKLSDYDYYLPEELIAQEPAEPRDSSRLMLVNRRTGE---IDITIFREIKNYLKSGDVLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L G + +I L +V + +P K K G + +FS
Sbjct: 60 LNNTKVIPARLYGKKDTG-----AKIEVLLLKKVEEGVYEALVKPGKRAKIGTKI-YFSG 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D + A V+++ G +L FS +LE + +G IPLPPYI K+P++ D Y
Sbjct: 114 D----IYAEVVERKEEGIFVLRFSQE--DLEEILPEIGNIPLPPYI--KKPLN--DPNKY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +G+VAAPTAGLHFT LL L +GI++ ++TLHVG GTF PV VED H +
Sbjct: 164 QTVYAQKEGAVAAPTAGLHFTEELLHTLQKMGIEILYITLHVGLGTFRPVVVEDITKHKL 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
E + A+ +N K G R+++VGTT R+LE A G + P +G ++FI PG
Sbjct: 224 DPEYFEVREDVAERINRAKEEGRRVIAVGTTVTRVLE-AQGRSGRVEPGAGLVDLFIYPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+ +D L++NFHLPKSTLLMLV+AF G + KK Y AI RFYS+GD ++
Sbjct: 283 FEFKILDGLITNFHLPKSTLLMLVAAFMGYDLMKKAYNRAIEERMRFYSFGDAMFIY 339
>gi|71274879|ref|ZP_00651167.1| Queuosine biosynthesis protein [Xylella fastidiosa Dixon]
gi|71901845|ref|ZP_00683909.1| Queuosine biosynthesis protein [Xylella fastidiosa Ann-1]
gi|170729868|ref|YP_001775301.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xylella
fastidiosa M12]
gi|238687969|sp|B0U6A9|QUEA_XYLFM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|71164611|gb|EAO14325.1| Queuosine biosynthesis protein [Xylella fastidiosa Dixon]
gi|71728396|gb|EAO30563.1| Queuosine biosynthesis protein [Xylella fastidiosa Ann-1]
gi|167964661|gb|ACA11671.1| S-adenosylmethionine: tRNA ribosyltransferase-isomerase [Xylella
fastidiosa M12]
Length = 347
Score = 249 bits (635), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 149/356 (41%), Positives = 209/356 (58%), Gaps = 20/356 (5%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+F +DLP IA P+ R ++RLM+V S P D V DLP L D +VFN+T
Sbjct: 6 DFHYDLPEELIAQGPLPERSASRLMLVP---SAPEQFQDCYVRDLPELLQPGDLLVFNDT 62
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQS 124
+VI A+L G + + + + + V R S+ +K G+ + G
Sbjct: 63 RVIPARLFGRKVSG-----GRVEVLIERFLGTHQAVVQLRTSRSLKVGNRI-LLDAGGH- 115
Query: 125 RLEATVIDKWNTGEI-LLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTT 183
A V+ + GE LL F + LE+ +S VG +PLPPYI R+ D D YQT
Sbjct: 116 ---AEVLGR--DGEFYLLSFDVES-PLEQWLSDVGQLPLPPYIHRE--PDEYDRERYQTV 167
Query: 184 YAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSE 243
+A+ G+VAAPTAGLHF +LL+RL + G++ ++TLHVGAGTF PV+V +H+MHSE
Sbjct: 168 FARAVGAVAAPTAGLHFDESLLARLRARGVEFGYITLHVGAGTFQPVRVALLQEHVMHSE 227
Query: 244 IGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRF 303
+ A + + S ++RGGR+++VGTT +R LE+A G + P+ G T IFI PGY
Sbjct: 228 WFKVGAELVEQVRSARARGGRVIAVGTTVVRSLESAMRH-GELQPFVGETQIFIFPGYCI 286
Query: 304 RAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
R+VD +++NFHLP+STLLMLV+AF G Y HA+ YRF+SYGD LLF +
Sbjct: 287 RSVDAMVTNFHLPESTLLMLVAAFAGRTRILDAYYHAVQQRYRFFSYGDAMLLFPR 342
>gi|116490643|ref|YP_810187.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Oenococcus oeni PSU-1]
gi|290890058|ref|ZP_06553141.1| hypothetical protein AWRIB429_0531 [Oenococcus oeni AWRIB429]
gi|116091368|gb|ABJ56522.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Oenococcus
oeni PSU-1]
gi|290480249|gb|EFD88890.1| hypothetical protein AWRIB429_0531 [Oenococcus oeni AWRIB429]
Length = 359
Score = 249 bits (635), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 139/362 (38%), Positives = 209/362 (57%), Gaps = 19/362 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FD++LP IA P+ RD++RL++++ D D+ +LN DA+V N
Sbjct: 11 LSDFDYNLPHELIAQTPLKQRDASRLLLLNAKTGA---YEDKHFYDIIDYLNPGDALVMN 67
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
N++VI A+L G R + + L + + W +P+K G ++ F +++
Sbjct: 68 NSRVIPARLRGWR----PETKGHVEVLLLRQDHGDVWETLIKPAKKFPVGSVIDFGNEN- 122
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
++ + V+ + G + F GI +E + +G +PLPPYI K +D YQT
Sbjct: 123 ETIMTGKVVGELEHGGRYVEFQYDGIFMEL-LDKLGEMPLPPYIKEK----LKDQERYQT 177
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
Y+KI+GS AAPTAGLH+T LL ++ + GIK +TLHVG GTF PV+ E+ D H MHS
Sbjct: 178 VYSKIEGSAAAPTAGLHWTPELLDKVRAKGIKTIELTLHVGLGTFRPVEEENIDKHKMHS 237
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE------DGIINPWSGFTNIF 296
E + A +N V++ GGRIV+ GTT++R LET + G + SG+T+IF
Sbjct: 238 EFYQLSQAAADQINQVRNNGGRIVATGTTTIRTLETIGHKFNRDKYGGNVQADSGWTDIF 297
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PG+R+ VD ++NFHLPKSTL+MLV+AF G E Y+HAI YRF+S+GD +
Sbjct: 298 IKPGFRWTTVDAFITNFHLPKSTLVMLVAAFTGRENILNAYKHAIQEKYRFFSFGDAMFI 357
Query: 357 FQ 358
+
Sbjct: 358 HK 359
>gi|297588493|ref|ZP_06947136.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Finegoldia
magna ATCC 53516]
gi|297573866|gb|EFH92587.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Finegoldia
magna ATCC 53516]
Length = 345
Score = 249 bits (635), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 146/357 (40%), Positives = 205/357 (57%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD++L IA P+ RD ++LMV+ + + + D +LN D +V
Sbjct: 1 MNTDDFDYELDEKFIAQTPLDKRDESKLMVMDRFNGNTEIKKFYNIID---YLNPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L F H +E++I L ++ + + W +P K +K ++ F
Sbjct: 58 CNNTRVIPARL----FGHRPGKEEKIEVLL-LQQTEDKWECLVKPGKKMKLDQVIEF--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
++ A V+D G +L F GI E ++ +G +PLPPYI K D Y
Sbjct: 110 --SDKVSAKVVDITEDGSRILKFDYEGI-FEERLDELGNMPLPPYIKEK----LNDKERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT+ LL ++ GI V F+TLHVG GTF PVKV+D DH M
Sbjct: 163 QTVYSKHKGSAAAPTAGLHFTNELLEKIKEKGIYVVFLTLHVGLGTFRPVKVDDVKDHHM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFITP 299
HSE I T +N KS+G I++VGTTS+R LET T + + SG+T+IFI P
Sbjct: 223 HSEYYTISQETVDIINRQKSKGHNIIAVGTTSVRTLETVTHNNNSKLVAESGWTDIFIYP 282
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
G+ F VD L++NFHLPKSTL+MLVSAF E Y+ A + +RF+S+GD +
Sbjct: 283 GFEFNIVDSLITNFHLPKSTLMMLVSAFSKKEYIFDAYEKAKRNDFRFFSFGDAMFI 339
>gi|119897199|ref|YP_932412.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Azoarcus
sp. BH72]
gi|166216698|sp|A1K3X0|QUEA_AZOSB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|119669612|emb|CAL93525.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Azoarcus
sp. BH72]
Length = 345
Score = 249 bits (635), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 147/356 (41%), Positives = 207/356 (58%), Gaps = 20/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +++FD+DLPP IA P+ R ++RL+VV + V++D DLP F+ D +V
Sbjct: 3 LSLQDFDYDLPPDLIAQAPLAERSASRLLVVDGD-----VLADRRFVDLPDFIRPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+V+ A+L GV+ ++ + + + R SK K G L
Sbjct: 58 FNDTRVLHARLFGVKATG-----GQVEVLVERPIGAHEALAQIRASKSPKPGSTLRL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
++ TV+ + +GE + + + G +PLPPYI +R D Y
Sbjct: 110 --ADAVDVTVLGR--SGEFFHLRFPDDENVVDVLERYGKLPLPPYI--QRAAGDADEARY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ GSVAAPTAGLHF +L RL + G +VTLHVGAGTF PV+V+D H M
Sbjct: 164 QTVFARAPGSVAAPTAGLHFDDAVLDRLRARGAGCAWVTLHVGAGTFQPVRVDDLAQHRM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I T +A+ ++ GGR+V+VGTTS+R LE A G + SG T+IFI PG
Sbjct: 224 HSERYVIPQETVEAIARTRANGGRVVAVGTTSMRALEAAAQA-GPLAAGSGETDIFILPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+RFR D+L++NFHLPKSTLLMLVSAF G + ++ Y HA++ YRF+SYGD LL
Sbjct: 283 FRFRVADMLVTNFHLPKSTLLMLVSAFSGTDVIRRAYAHAVASRYRFFSYGDAMLL 338
>gi|308272819|emb|CBX29423.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase [uncultured
Desulfobacterium sp.]
Length = 357
Score = 249 bits (635), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 144/358 (40%), Positives = 205/358 (57%), Gaps = 15/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
++ ++D++L +IA +P RD++RLMV+ N + S++ F++ D IV
Sbjct: 4 FLLSDYDYELSEDQIAQKPASCRDASRLMVLDKNTGSTF---HNKFSEICDFISPKDIIV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS----WSVYARPSKVIKKGDILH 116
NNTKVI +L G + + T +R + + SK K+G ++
Sbjct: 61 INNTKVIPGRLFGKKETGGKAEILILDFTGGIREQDKTGDFICECLVKTSKPAKQGSLIL 120
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR- 175
F + L A V++ G LL FS S E + +G +PLPPYI R + +
Sbjct: 121 F-----EENLTAKVLNDVKDGICLLKFS-SSENFEEILLRIGKMPLPPYIKRDKDNNKSI 174
Query: 176 -DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D YQT YA G+VAAPTAGLHFT LL ++ + G K +TLHVG GTF+PV+V D
Sbjct: 175 DDKTSYQTVYASYSGAVAAPTAGLHFTRELLEKIKAKGTKTAEITLHVGYGTFLPVRVSD 234
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
+H +HSE I A+A+N+V++ GG+I++VGTT +R LE A+ G + SG +
Sbjct: 235 IREHEIHSERYDISFEAAEAINTVRADGGKIIAVGTTCIRTLEYASDHKGRVLSGSGKCD 294
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+FI PGY F+ VD +++NFHLP+STLLMLVSAF G E Y+ AIS YRFYSYGD
Sbjct: 295 LFIYPGYSFKVVDSIITNFHLPRSTLLMLVSAFAGRERILSAYKEAISQGYRFYSYGD 352
>gi|254373176|ref|ZP_04988665.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. novicida GA99-3549]
gi|151570903|gb|EDN36557.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
novicida GA99-3549]
Length = 340
Score = 249 bits (635), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 138/357 (38%), Positives = 212/357 (59%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LP IA P+ RD++RL+ ++ I+DH +D F+N D +V
Sbjct: 3 MKTDDFDYKLPEELIASYPLENRDASRLLKLNKQTGE---IADHKFTDFIDFINPGDLLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV+ A+L G + ++ + +P + + + ++ G ++
Sbjct: 60 FNNSKVMLARLYGSKTTG-----AKLEYLIERIKTPKLFETHIKANRSPAIGSEIYV--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ L A V+DK G + L+ ++ R + G IPLPPY+ KR + D Y
Sbjct: 112 --EDTL-AKVLDK--DGGMYLLEIQGDKDIYRLMEEFGHIPLPPYM--KRDDEEFDAERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GSVAAPTAGLHF+ L+ ++ G+ + ++TLHVG+GTF PV+V+D + H M
Sbjct: 165 QTVYAQDLGSVAAPTAGLHFSKELMQQIKDKGVDIAYITLHVGSGTFKPVQVDDVESHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E+ + Q + K+ GGR++++GTTS+R LETA ++G I P+ G T+IF+ PG
Sbjct: 225 HAEVISVPVEVCQKIRQTKANGGRVIAIGTTSVRSLETA-GQNGQIEPYQGETDIFLYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F VD +++NFHLPKSTL+MLVSAF E+ K Y+HAI+ YRF+SYGD +F
Sbjct: 284 KKFNVVDAMITNFHLPKSTLIMLVSAFADKEKIIKAYEHAIAERYRFFSYGDAMFIF 340
>gi|172035354|ref|YP_001801855.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cyanothece
sp. ATCC 51142]
gi|171696808|gb|ACB49789.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cyanothece
sp. ATCC 51142]
Length = 361
Score = 248 bits (634), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 148/369 (40%), Positives = 207/369 (56%), Gaps = 28/369 (7%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D+DLPP IA P+ PRD +RL+V+ + P + DLP +L D +VF
Sbjct: 6 LLSSYDYDLPPELIAQNPMIPRDHSRLLVI----NSPTTHIHSVFRDLPKWLLPGDLLVF 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF---F 118
NNT+VI A+L G + + L P W +P K K G +HF
Sbjct: 62 NNTRVIPARLYGKKTTG-----APVEILLLEEKEPFCWLALVKPGKRFKIGSEIHFPLDH 116
Query: 119 SQDGQSR-LEATVIDK-WNTGEILLVFSISGIEL-ERQISLVGTIPLPPYIARKRPIDAR 175
+ D + L ATV+D+ TG LL F++ ++L ++I +G IP PPY+
Sbjct: 117 NDDKEDMFLAATVLDRDEETGGRLLKFNVDSLDLFWKKIEEIGQIPFPPYVTESEA---- 172
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT YA+ G+VAAPTAGLHFT LL L I ++TLHVG GTF PV +E+
Sbjct: 173 DSSQYQTIYAQKPGAVAAPTAGLHFTDELLDNLQHKRINQAYITLHVGLGTFRPVDMENI 232
Query: 236 DDHIMHSEIGFIDAP--TAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-----INP 288
+H MH E +I+ P T + + K+ GGR+++VGTT +R LE A + +
Sbjct: 233 KEHKMHQE--WIEVPDVTVEKIKETKANGGRVIAVGTTVVRALEGAAKAAEMEGKKDLKA 290
Query: 289 WSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
+ G T+IFI PGY +R +D +++NFHLPKS+LLMLVSA G E +YQ AI YRFY
Sbjct: 291 FRGKTDIFIYPGYSWRVIDGMITNFHLPKSSLLMLVSALIGRERLLDLYQIAIKEKYRFY 350
Query: 349 SYGDTSLLF 357
S+GD L+
Sbjct: 351 SFGDGMLIL 359
>gi|88706927|ref|ZP_01104626.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Congregibacter litoralis KT71]
gi|88698849|gb|EAQ95969.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Congregibacter litoralis KT71]
Length = 352
Score = 248 bits (634), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 147/363 (40%), Positives = 203/363 (55%), Gaps = 27/363 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R ++RL+ V+ + +DLP LN+ D +V
Sbjct: 1 MQRSDFSYDLPQELIAQTPLAERSASRLLCVN---GMQKSFEHKVFTDLPEQLNAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCH------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
FNNT+V+ A+L GV+ I R + S H+R S K K G
Sbjct: 58 FNNTRVLPARLFGVKETGGRVEILIERLTGDCSALAHIRAS-----------KTPKPGMS 106
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPID 173
+ + + + + GE+ F I+ E L ++ +G +PLPPYI R
Sbjct: 107 IALAADVDSPATDVRLTVQGREGEL---FKITSAESLGPLLARIGHMPLPPYIDRADA-- 161
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
A D YQT YA+ G+VAAPTAGLHF LL RL ++G++ VTLHVGAGTF PV+ +
Sbjct: 162 AEDKERYQTVYAQRDGAVAAPTAGLHFDEALLKRLDALGVRRAEVTLHVGAGTFQPVRSD 221
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
D DH MH+E +D A+ + ++RGGR+V+VGTT++R LETA G + P+ G T
Sbjct: 222 DIRDHEMHAEYLEVDQAVCDAVEATRARGGRVVAVGTTAVRSLETAAAS-GRLGPYVGDT 280
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+FI PGYRF VD +++NFHLP+STLLMLVSAF G + Y A+ YRF+SYGD
Sbjct: 281 QLFIYPGYRFHCVDAMVTNFHLPESTLLMLVSAFSGKDLMLAAYNEAVKERYRFFSYGDA 340
Query: 354 SLL 356
L
Sbjct: 341 MFL 343
>gi|302879498|ref|YP_003848062.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Gallionella
capsiferriformans ES-2]
gi|302582287|gb|ADL56298.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Gallionella
capsiferriformans ES-2]
Length = 344
Score = 248 bits (634), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 151/357 (42%), Positives = 198/357 (55%), Gaps = 22/357 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M EFDF LP IA P R ++RL+ VH ++ D DL + D +V
Sbjct: 1 MRTDEFDFALPDGLIAQHPPEKRGASRLLCVHDG-----ILEDSQFVDLLQKVAPGDLLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G I R +I + ++ + R SK G + +
Sbjct: 56 LNDTRVIRARLFG-----IKRSGGKIEVMVERVLNNHEVLAQVRASKSPPTGSYVLLAGE 110
Query: 121 DGQSRLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
L V+ + GE L F LE + G +PLPPYI +A D
Sbjct: 111 -----LSVEVMGR--AGEFYHLRFCAEEPVLEL-LERYGRLPLPPYITHA--AEAEDETR 160
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A+ G+VAAPTAGLHF +L L G+K+ +VTLHVGAGTF PV+ E +HI
Sbjct: 161 YQTVFARQSGAVAAPTAGLHFDDAMLEALQDKGVKIAYVTLHVGAGTFQPVRAEWLSEHI 220
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE I T A+ + GGR+V+VGTTSLR LE+A G + +G T IFITP
Sbjct: 221 MHSECYQISQATVDAIEQTHAAGGRVVAVGTTSLRALESAAA-SGELQSGAGETRIFITP 279
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GYRFR VD+L++NFHLPKSTLLMLVSAF G+ E + Y HA++ YRF+SYGD L+
Sbjct: 280 GYRFRVVDVLLTNFHLPKSTLLMLVSAFGGMSEMRAAYLHAVAQQYRFFSYGDAMLI 336
>gi|27363914|ref|NP_759442.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
vulnificus CMCP6]
gi|31076954|sp|Q8DEX9|QUEA_VIBVU RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|27360031|gb|AAO08969.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
vulnificus CMCP6]
Length = 350
Score = 248 bits (634), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 147/365 (40%), Positives = 216/365 (59%), Gaps = 23/365 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ ++ N + D D+ + + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQSERTASRLLQLNGNTGA---VKDGSFKDVLELVQAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREK--EISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
FNNT+VI A++ G R+E ++ + + + + R SK K G ++ F
Sbjct: 58 FNNTRVIPARMFG-------RKESGGKLEVLVERMLDEKRFLAHVRSSKSPKPGTLV-FL 109
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
++ Q E V + E+ L + +E+ +I G +PLPPYI RP + D
Sbjct: 110 GEEDQYSAE-MVARQDALFELHLKADKTILEVLEEI---GHMPLPPYI--DRPDEDADKE 163
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y + G+VAAPTAGLHF + LL ++ + G + +VTLHVGAGTF PVKV++ +H
Sbjct: 164 RYQTVYNQKPGAVAAPTAGLHFDNQLLEQIKAKGAEFAYVTLHVGAGTFQPVKVDNILEH 223
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE---DGI-INPWSGFTN 294
MHSE + A+N+ K+RGGR+++VGTTS+R LE+A E +G + P+ G T
Sbjct: 224 HMHSEYAEVPQEVVDAINATKARGGRVIAVGTTSVRSLESAAQESLKNGTELMPFFGDTE 283
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PGY+++ VD L++NFHLP+STL+MLVSAF G + T YQHA+S+ YRF+SYGD
Sbjct: 284 IFIFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYDHTMNAYQHAVSNQYRFFSYGDAM 343
Query: 355 LLFQK 359
+ +K
Sbjct: 344 FIEKK 348
>gi|327381705|gb|AEA53181.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus casei LC2W]
gi|327384871|gb|AEA56345.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus casei BD-II]
Length = 357
Score = 248 bits (634), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 140/356 (39%), Positives = 204/356 (57%), Gaps = 17/356 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FD+DLP IA P+ RD++RL+V++ + D D+ + DA+V N
Sbjct: 18 LSDFDYDLPHELIAQTPLKERDASRLLVLNSETGE---MQDKRFYDILDYFKPGDALVMN 74
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+V+ A+L GV+ + L S + W +P++ G ++ F G
Sbjct: 75 DTRVMPARLYGVK----PETGAHMEVLLLNNTSGDDWETLMKPARKAPVGTVIDF----G 126
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
L+A V + G ++ F GI +E + +G PLPPYI K D YQT
Sbjct: 127 DGLLKARVTKELEHGGRMIHFDYDGIFME-ILDKLGETPLPPYIKEK----LEDPEMYQT 181
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
Y+K GS AAPTAGLH+T +LL ++ G+K+ ++TLHVG GTF PV E+ + H MHS
Sbjct: 182 VYSKELGSAAAPTAGLHWTKDLLKKVQEKGVKLVYLTLHVGLGTFRPVVEENIEAHKMHS 241
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + A LN V+ GGRI++ GTTS+R LE T+ DG I SG+T+IFI PGY
Sbjct: 242 EFYRLTPEAAATLNDVRDNGGRIIATGTTSIRTLEAIGTKFDGAIKADSGWTDIFIKPGY 301
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+++ VD ++NFHLPKSTL+MLV+AF G + Y+HAI YRF+S+GD ++
Sbjct: 302 QWKVVDAFITNFHLPKSTLVMLVAAFTGRDTILNAYKHAIDEKYRFFSFGDAMFIY 357
>gi|325846681|ref|ZP_08169596.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|325481439|gb|EGC84480.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 340
Score = 248 bits (634), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 147/356 (41%), Positives = 199/356 (55%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++FD++LP IA P RD +RLMVV D D+ +LN D +V
Sbjct: 1 MRTEDFDYNLPEELIAQHPADKRDFSRLMVVDRKTGQR---EDKHFYDIIDYLNEGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L F H +E++I L + + W V +P K +K G F
Sbjct: 58 MNDTRVIPARL----FGHRPDKEEKIEVFLLENIEKDKWEVLVKPGKKMKIGTKCIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L VID G ++ FS GI + + +G +PLPPYI K +D Y
Sbjct: 111 --SDELSLEVIDIKEDGNRVVEFSYEGI-FQEILDRLGNMPLPPYIKEK----LKDKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GSVAAPTAGLHFT LL ++ G+K+ F+TL+VG GTF PVKV+D +H M
Sbjct: 164 QTVYSKNPGSVAAPTAGLHFTKELLKKIEDKGVKLAFITLNVGLGTFRPVKVDDVKNHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I TA +N K RI+S GTT+ R LE+ ++G I SG+T+IFI PG
Sbjct: 224 HSEYYQISKETADLINETKKNNKRIISTGTTTTRTLESVFKKNGQIKEDSGWTDIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
++F +D ++NFHLPKSTL+MLVSA E Y+ A+ YRF+S+GD L
Sbjct: 284 FKFNVIDCQITNFHLPKSTLIMLVSALANKEIILDAYKDAVEKKYRFFSFGDAMFL 339
>gi|157825416|ref|YP_001493136.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
akari str. Hartford]
gi|166216746|sp|A8GMK3|QUEA_RICAH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|157799374|gb|ABV74628.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
akari str. Hartford]
Length = 371
Score = 248 bits (634), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 144/393 (36%), Positives = 221/393 (56%), Gaps = 56/393 (14%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF+LP IA P RD++ L++ + P + + ++ +L D +V
Sbjct: 1 MKLSAFDFNLPSELIAQSPSSERDNSDLLIA----AMPPIKTK--FYNIIDYLKEGDLLV 54
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN+KVI A+L H+ K ++ L+ ++S +SWS +A+P++ + D +F +
Sbjct: 55 LNNSKVIKAKL------HL---WKNVTINLNQKLSDDSWSAFAKPTRKLHVNDEFYFDNH 105
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARK----------- 169
+ + +K GEI + F + I + + G +PLP YI R
Sbjct: 106 ------KVIITEKLVMGEIKVKFDLDNISVFEFLDKYGEMPLPVYIRRSHSLYHTTSTLC 159
Query: 170 ---------------RPIDARDYVD--------YQTTYAKIQGSVAAPTAGLHFTSNLLS 206
R D +D + YQT Y++I+GSVAAPTAGLHFT+++L
Sbjct: 160 HTRENGYSEKLDAFFRRNDIKDKDNDIVYDNERYQTIYSQIEGSVAAPTAGLHFTNDILD 219
Query: 207 RLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIV 266
+L + GI F+TLHVGAGTF+PVK E+ +H MH+E I TA+ +N K RI+
Sbjct: 220 KLKTKGIHTAFLTLHVGAGTFLPVKTENIHEHKMHTEYCSITPETAEIINKAKQERRRII 279
Query: 267 SVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSA 326
+VGTT+LR +E+ +GII S T+IFITPG++F+ D+L++NFH PKSTL ML+ A
Sbjct: 280 AVGTTTLRTVESFCN-NGIIKAGSFETDIFITPGFKFQTADMLLTNFHFPKSTLFMLICA 338
Query: 327 FCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
F G +E ++Y++AI RF+SYGD +LL++K
Sbjct: 339 FAGFKEMHELYKYAIKEKMRFFSYGDATLLYRK 371
>gi|113474574|ref|YP_720635.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Trichodesmium erythraeum IMS101]
gi|110165622|gb|ABG50162.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Trichodesmium erythraeum IMS101]
Length = 369
Score = 248 bits (634), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 146/375 (38%), Positives = 217/375 (57%), Gaps = 39/375 (10%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D++LP IA PV PRDS+RLMV+ L + + DLP L D +V N
Sbjct: 8 IEAYDYELPQELIAQNPVVPRDSSRLMVIES-----LTHNHRIFRDLPDLLQPEDLLVLN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF----- 117
NT+VI A+L G + ++ L +++ +SW +P K G + F
Sbjct: 63 NTRVIPARLYGQKTSG-----AQVEILLLKQITNDSWLALVKPGKHFSAGTRIEFEPNSS 117
Query: 118 FSQDGQSRLEATV--IDKWNTGEILLVF---SISGIELERQISLVGTIPLPPYIARKRPI 172
F+ D +L+ATV ID+ G +L + +S ++L +Q G IP PPY+ + +
Sbjct: 118 FTCD--YKLQATVLAIDQETGGRVLQFYWPQEVSWLDLLKQF---GHIPFPPYVTGSQAL 172
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+ YQT Y+KI G++AAPTAGLHFT LL +L I F+TLHVG GTF PV+V
Sbjct: 173 TEQ----YQTVYSKIAGAIAAPTAGLHFTDELLYKLEQGNIGRAFITLHVGIGTFRPVEV 228
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-------TTEDG- 284
+D H +HSE + + + ++ K++GGRI++VGTT +R +E A +T++
Sbjct: 229 KDITTHNIHSEWVEVSSLSVDKIHQTKAKGGRIIAVGTTVVRAIEAAALANDNYSTQESL 288
Query: 285 --IINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAIS 342
+I P+S +T+IFI PGY++R VD L++NFHLP+S+LLMLVSA G + +YQ AI
Sbjct: 289 IPLIRPFSDYTDIFIYPGYKWRVVDGLITNFHLPRSSLLMLVSAMIGRKRLLSLYQDAID 348
Query: 343 HAYRFYSYGDTSLLF 357
YRFYS+GD +
Sbjct: 349 QKYRFYSFGDAMFIL 363
>gi|169824511|ref|YP_001692122.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Finegoldia
magna ATCC 29328]
gi|302380757|ref|ZP_07269222.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Finegoldia
magna ACS-171-V-Col3]
gi|303233794|ref|ZP_07320448.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Finegoldia
magna BVS033A4]
gi|238687748|sp|B0S1J2|QUEA_FINM2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|167831316|dbj|BAG08232.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Finegoldia
magna ATCC 29328]
gi|302311700|gb|EFK93716.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Finegoldia
magna ACS-171-V-Col3]
gi|302495228|gb|EFL54980.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Finegoldia
magna BVS033A4]
Length = 345
Score = 248 bits (634), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 146/357 (40%), Positives = 203/357 (56%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD++L IA P+ RD ++LMV+ + + + D +LN D +V
Sbjct: 1 MNTDDFDYELDEKFIAQTPLDKRDESKLMVMDRFNGNTEIKKFYNIID---YLNPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L F H +E++I L ++ + + W +P K +K ++ F
Sbjct: 58 CNNTRVIPARL----FGHRPEKEEKIEVLL-LQQTEDKWECLVKPGKKMKLNQVIEF--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A V+D G +L F GI E ++ +G +PLPPYI K D Y
Sbjct: 110 --SDSVSAKVVDITEDGSRILKFEYEGI-FEERLDELGNMPLPPYIKEK----LNDKERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT+ LL ++ GI V F+TLHVG GTF PVKV+D DH M
Sbjct: 163 QTVYSKHNGSAAAPTAGLHFTNELLEKIKDKGIYVVFLTLHVGLGTFRPVKVDDVKDHHM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFITP 299
HSE I T +N KS+G I++VGTTS+R LET T + + SG+T+IFI P
Sbjct: 223 HSEYYTISQETVDIINRQKSKGHNIIAVGTTSVRTLETVTHNNNSKLVAESGWTDIFIYP 282
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
G+ F VD L++NFHLPKSTL+MLVSAF E Y+ A + +RF+S+GD +
Sbjct: 283 GFEFNIVDSLITNFHLPKSTLMMLVSAFSKKEYIFDAYEKAKQNDFRFFSFGDAMFI 339
>gi|191637650|ref|YP_001986816.1| S-adenosylmethionine tRNA ribosyltransferase-isomerase
[Lactobacillus casei BL23]
gi|190711952|emb|CAQ65958.1| S-adenosylmethionine tRNA ribosyltransferase-isomerase
[Lactobacillus casei BL23]
Length = 356
Score = 248 bits (633), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 140/356 (39%), Positives = 204/356 (57%), Gaps = 17/356 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FD+DLP IA P+ RD++RL+V++ + D D+ + DA+V N
Sbjct: 17 LSDFDYDLPHELIAQTPLKERDASRLLVLNSETGE---MQDKRFYDILDYFKPGDALVMN 73
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+V+ A+L GV+ + L S + W +P++ G ++ F G
Sbjct: 74 DTRVMPARLYGVK----PETGAHMEVLLLNNTSGDDWETLMKPARKAPVGTVIDF----G 125
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
L+A V + G ++ F GI +E + +G PLPPYI K D YQT
Sbjct: 126 DGLLKARVTKELEHGGRMIHFDYDGIFME-ILDKLGETPLPPYIKEK----LEDPEMYQT 180
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
Y+K GS AAPTAGLH+T +LL ++ G+K+ ++TLHVG GTF PV E+ + H MHS
Sbjct: 181 VYSKELGSAAAPTAGLHWTKDLLKKVQEKGVKLVYLTLHVGLGTFRPVVEENIEAHKMHS 240
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + A LN V+ GGRI++ GTTS+R LE T+ DG I SG+T+IFI PGY
Sbjct: 241 EFYRLTPEAAATLNDVRDNGGRIIATGTTSIRTLEAIGTKFDGAIKADSGWTDIFIKPGY 300
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+++ VD ++NFHLPKSTL+MLV+AF G + Y+HAI YRF+S+GD ++
Sbjct: 301 QWKVVDAFITNFHLPKSTLVMLVAAFTGRDTILNAYKHAIDEKYRFFSFGDAMFIY 356
>gi|319944500|ref|ZP_08018771.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Lautropia
mirabilis ATCC 51599]
gi|319742213|gb|EFV94629.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Lautropia
mirabilis ATCC 51599]
Length = 351
Score = 248 bits (633), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 155/363 (42%), Positives = 205/363 (56%), Gaps = 28/363 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLV-ISDHLVSDLPAFLNSNDAI 59
M + +FD+ LP IA P R RL+ V + P +D L++DLP + +
Sbjct: 1 MKLSDFDYHLPEELIAQYPPEQRAGGRLLDVTTLMQQPEASAADRLLADLPELIAPGSLL 60
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYA--RPSKVIKKGDILHF 117
VFN+T+VI A+L G R+E + + V A R S K G LHF
Sbjct: 61 VFNDTRVIHARLAG-------RKESGGRIEVMVERIDGEHEVLAMVRASHPPKAGSRLHF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSI----SGIELERQISLVGTIPLPPYIARKRPID 173
++ ATV+ G ++L +G+ LER +G +PLPPYI + D
Sbjct: 114 GPENATEC--ATVVSAREPGSMMLRIRFDAPAAGV-LER----LGELPLPPYIQHQ--PD 164
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT +A+ G+VAAPTAGLHF LL+ L + GI +TLHVGAGTF+PV+ E
Sbjct: 165 QADEARYQTVFAREPGAVAAPTAGLHFDEALLAALRARGIDSAHLTLHVGAGTFLPVRTE 224
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
D H MHSE + A TAQA+ K+ G +V++GTT+LR LE + G SG T
Sbjct: 225 DLSQHHMHSERYTLSAETAQAIARAKAEGRPVVAIGTTALRALEASGGVAG-----SGET 279
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
++FITPGYRFR VD L +NFHLPKSTLL+LVSAF G E ++ Y HAI+ YRF+SYGD
Sbjct: 280 DLFITPGYRFRVVDRLFTNFHLPKSTLLILVSAFAGRETIRRAYAHAIAQRYRFFSYGDA 339
Query: 354 SLL 356
LL
Sbjct: 340 MLL 342
>gi|227534466|ref|ZP_03964515.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Lactobacillus paracasei subsp. paracasei ATCC 25302]
gi|227187865|gb|EEI67932.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Lactobacillus paracasei subsp. paracasei ATCC 25302]
Length = 361
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 140/356 (39%), Positives = 204/356 (57%), Gaps = 17/356 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FD+DLP IA P+ RD++RL+V++ + D D+ + DA+V N
Sbjct: 22 LSDFDYDLPHELIAQTPLKERDASRLLVLNSETGE---MQDKHFYDILDYFKPGDALVMN 78
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+V+ A+L GV+ + L S + W +P++ G ++ F G
Sbjct: 79 DTRVMPARLYGVK----PETGAHMEVLLLNNTSGDDWETLMKPARKAPVGTVIDF----G 130
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
L+A V + G ++ F GI +E + +G PLPPYI K D YQT
Sbjct: 131 DGLLKARVTKELEHGGRMIHFDYDGIFME-ILDKLGETPLPPYIKEK----LEDPEMYQT 185
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
Y+K GS AAPTAGLH+T +LL ++ G+K+ ++TLHVG GTF PV E+ + H MHS
Sbjct: 186 VYSKELGSAAAPTAGLHWTKDLLKKVQEKGVKLVYLTLHVGLGTFRPVVEENIEAHKMHS 245
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + A LN V+ GGRI++ GTTS+R LE T+ DG I SG+T+IFI PGY
Sbjct: 246 EFYRLTPEAAATLNDVRDNGGRIIATGTTSIRTLEAIGTKFDGAIKADSGWTDIFIKPGY 305
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+++ VD ++NFHLPKSTL+MLV+AF G + Y+HAI YRF+S+GD ++
Sbjct: 306 QWKVVDAFITNFHLPKSTLVMLVAAFTGRDTILNAYKHAIDEKYRFFSFGDAMFIY 361
>gi|305664560|ref|YP_003860847.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Maribacter
sp. HTCC2170]
gi|88708577|gb|EAR00813.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Maribacter
sp. HTCC2170]
Length = 349
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 143/363 (39%), Positives = 204/363 (56%), Gaps = 22/363 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F+F+LP +A P RD ++LMV+H I + DL + + D +V
Sbjct: 1 MKLSHFNFELPNDLLAEYPAENRDESKLMVIHRETGK---IEHKMFKDLINYFDEGDVMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREK-----EISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
NNTKV A+L G +EK E+ + W V P++ I+ G+ L
Sbjct: 58 LNNTKVFPARLYG-------NKEKTGARIEVFLLRELNEEQRLWDVLVDPARKIRIGNKL 110
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPID 173
+F + L A VID + L F G + R++ +G PLP YI KR ++
Sbjct: 111 YFGEDES---LVAEVIDNTTSRGRTLRFLYDGSYTDFRRKLRELGQTPLPKYI--KRDVE 165
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT YAK +G+VAAPTAGLHF+ +LL RL G+ +TLHVG GTF PV+VE
Sbjct: 166 EEDETRYQTIYAKHEGAVAAPTAGLHFSKHLLKRLEIKGVDFAELTLHVGLGTFNPVEVE 225
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
D H M SE ID + +N+ KS ++ +VGTT++R LE+A + + +N ++G+T
Sbjct: 226 DLSKHKMDSEELIIDEKATEIVNNAKSNKRKVCAVGTTAMRGLESAVSSEHTLNTFNGWT 285
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
N F+ P Y F + +++NFHLPKSTLLM+VSAF G + KK Y+ AI +Y+FYSYGD
Sbjct: 286 NKFVFPPYEFSIANCMVTNFHLPKSTLLMMVSAFIGHDLMKKAYKEAILESYKFYSYGDA 345
Query: 354 SLL 356
L+
Sbjct: 346 MLI 348
>gi|152996661|ref|YP_001341496.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Marinomonas sp. MWYL1]
gi|189038527|sp|A6VYN2|QUEA_MARMS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|150837585|gb|ABR71561.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Marinomonas sp. MWYL1]
Length = 353
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 144/354 (40%), Positives = 212/354 (59%), Gaps = 18/354 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V ++ FDLP S IA P+ R ++RL+ H + V+ D+ + D +V
Sbjct: 1 MLVSDYHFDLPDSLIANYPMPDRTASRLL--HLDGHSGEVVHRQF-PDVLDLVQPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + ++ N + R SK K+ L Q
Sbjct: 58 FNNTRVIPARVFGQK-----ESGGKVEILVERVINVNEALAHVRASKSPKESSKL-ILGQ 111
Query: 121 DGQSRLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
D +EAT+I + +G + LVF +++ + G +PLPPYI +RP + D
Sbjct: 112 DKGEHIEATMIGR--SGALFHLVFDEPVLDV---LMRAGHMPLPPYI--ERPDEDSDQER 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y + G+VAAPTAGLHF LL +L + G++ FVTLHVGAGTF P+KVE+ DHI
Sbjct: 165 YQTVYNQKPGAVAAPTAGLHFDEALLEKLKAKGVETAFVTLHVGAGTFQPMKVENVKDHI 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH+E ++ + + + K+RGGR+++VGTTS+R LE+A ++ G I P G T+IFI P
Sbjct: 225 MHAEYVEVEPSVVEQVKAAKARGGRVIAVGTTSVRSLESA-SQSGEIAPMQGDTSIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
GY F+ VD L++NFHLP+STL+ML+SAF G + Y+ A+ YRF+SYGD
Sbjct: 284 GYEFKTVDALVTNFHLPESTLIMLISAFAGYDHVMAAYKKAVEQKYRFFSYGDA 337
>gi|319892693|ref|YP_004149568.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase
[Staphylococcus pseudintermedius HKU10-03]
gi|317162389|gb|ADV05932.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase
[Staphylococcus pseudintermedius HKU10-03]
Length = 341
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 146/356 (41%), Positives = 212/356 (59%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EFD+ LP IA P+ RD +RL+ ++ + D D+ F D +V
Sbjct: 1 MNIEEFDYVLPEPLIAQTPLKQRDQSRLLYLNRDTGE---TEDLHFKDITRFFQPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + ++ + W V +P+K IK G L F
Sbjct: 58 LNDTRVMPARLFGIK----EETNAKVEMLMLTQIEGDDWEVLLKPAKRIKLGQTLSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +++AT I + + G ++ S GI L+ ++ +G +PLPPYI K +D ++ Y
Sbjct: 111 -GEGKIKATCIKELDQGGRIMRLSYEGI-LQERLDELGEMPLPPYI--KERLDEKER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + G+++ F+TLHVG GTF PV V+ DDH M
Sbjct: 165 QTVYAKAAGSAAAPTAGLHFTDALLDDIRRQGVQIAFITLHVGLGTFRPVSVDHIDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN K+ G RI+SVGTTS R LET ++ SG+TNIFI PG
Sbjct: 225 HSEYYQMSQETADILNQTKAAGHRIISVGTTSTRTLETIRSQFDTFQATSGWTNIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ F+A+D L++NFHLPKSTL+MLVSAF + Y HA++ YRF+S+GD ++
Sbjct: 285 FEFKAIDGLITNFHLPKSTLVMLVSAFSSRQFVLSAYHHAVAEKYRFFSFGDAMII 340
>gi|28198472|ref|NP_778786.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xylella
fastidiosa Temecula1]
gi|182681150|ref|YP_001829310.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xylella
fastidiosa M23]
gi|32129946|sp|Q87DW7|QUEA_XYLFT RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|238691103|sp|B2I961|QUEA_XYLF2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|28056556|gb|AAO28435.1| S-adenosylmethionine: tRNA ribosyltransferase-isomerase [Xylella
fastidiosa Temecula1]
gi|182631260|gb|ACB92036.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Xylella
fastidiosa M23]
gi|307579595|gb|ADN63564.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xylella
fastidiosa subsp. fastidiosa GB514]
Length = 347
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 149/356 (41%), Positives = 209/356 (58%), Gaps = 20/356 (5%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+F +DLP IA P+ R ++RLM+V S P D V DLP L D +VFN+T
Sbjct: 6 DFHYDLPEELIAQGPLPERSASRLMLVP---SAPEQFQDCYVRDLPELLQPGDLLVFNDT 62
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQS 124
+VI A+L G + + + + + V R S+ +K G+ + G
Sbjct: 63 RVIPARLFGRKVSG-----GRVELLIERFLGTHQAVVQLRTSRSLKVGNRI-LLDAGGH- 115
Query: 125 RLEATVIDKWNTGEI-LLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTT 183
A V+ + GE LL F + LE+ +S VG +PLPPYI R+ D D YQT
Sbjct: 116 ---AEVLGR--DGEFYLLSFDVES-PLEQWLSDVGQLPLPPYIHRE--PDEYDRERYQTV 167
Query: 184 YAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSE 243
+A+ G+VAAPTAGLHF +LL+RL + G++ ++TLHVGAGTF PV+V +H+MHSE
Sbjct: 168 FARSVGAVAAPTAGLHFDESLLARLRARGVEFGYITLHVGAGTFQPVRVALLQEHVMHSE 227
Query: 244 IGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRF 303
+ A + + S ++RGGR+++VGTT +R LE+A G + P+ G T IFI PGY
Sbjct: 228 WFKVGAELVEQVRSARARGGRVIAVGTTVVRSLESAMRH-GELQPFVGETQIFIFPGYCI 286
Query: 304 RAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
R+VD +++NFHLP+STLLMLV+AF G Y HA+ YRF+SYGD LLF +
Sbjct: 287 RSVDAMVTNFHLPESTLLMLVAAFAGRTRILDAYYHAVQQRYRFFSYGDAMLLFPR 342
>gi|319953715|ref|YP_004164982.1| s-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Cellulophaga algicola DSM 14237]
gi|319422375|gb|ADV49484.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Cellulophaga algicola DSM 14237]
Length = 349
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 146/363 (40%), Positives = 200/363 (55%), Gaps = 22/363 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F+F+LP +A P RD ++LMV+H I + D+ + + D +V
Sbjct: 1 MKLSGFNFELPEELLAEYPAENRDESKLMVIHRETGK---IEHKMFKDMINYFDEGDVMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREK-----EISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
NNTKV A+L G +EK E+ + W V P++ I+ G+ L
Sbjct: 58 LNNTKVFPARLYG-------NKEKTGARIEVFLLRELNEEQRLWDVLVDPARKIRIGNKL 110
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPID 173
+F D L A VID + L F G + R++ +G PLP YI KR +
Sbjct: 111 YFGDDD---TLVAEVIDNTTSRGRTLRFLYDGSYTDFRRKLKELGDTPLPKYI--KRETE 165
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
A D YQT YAK +G+VAAPTAGLHF+ +LL RL GI +TLHVG GTF PV+VE
Sbjct: 166 AEDAERYQTIYAKHEGAVAAPTAGLHFSKHLLKRLEIKGIDFAELTLHVGLGTFNPVEVE 225
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
D H M SE ID T + +N+ K RI ++GTT++R LE+ + +N + G+T
Sbjct: 226 DLSKHKMDSEELIIDEKTTEIVNNAKKNKKRICAIGTTAMRGLESGVSSQHTLNTFEGWT 285
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
N FI P Y F + +++NFHLPKSTLLM+VSAF G + KK Y+ AI Y+FYSYGD
Sbjct: 286 NKFIFPPYDFSIANCMVTNFHLPKSTLLMMVSAFMGHDLMKKAYKEAILEGYKFYSYGDA 345
Query: 354 SLL 356
L+
Sbjct: 346 MLI 348
>gi|270157347|ref|ZP_06186004.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Legionella
longbeachae D-4968]
gi|289164259|ref|YP_003454397.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Legionella
longbeachae NSW150]
gi|269989372|gb|EEZ95626.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Legionella
longbeachae D-4968]
gi|288857432|emb|CBJ11260.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Legionella
longbeachae NSW150]
Length = 337
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 147/357 (41%), Positives = 207/357 (57%), Gaps = 20/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F FDLP IA P+ R +RL+V + H ++ FL S D +V
Sbjct: 1 MNKEDFYFDLPHELIAQYPLANRSDSRLLVYDRKIG---EYGHHQFREIADFLKSGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N++KVI A+L G + ++ + ++ + + SK +K G I+
Sbjct: 58 MNDSKVIPARLYGHK-----TTGGKVELLVERITGEFTFLAHIKASKALKAGSIIQL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++D+ + L + IE+ ++ VG IPLPPYIAR + D Y
Sbjct: 110 --EQNKHIEILDRQDD----LFVCKANIEVLELLNGVGHIPLPPYIARND--ETLDIDRY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GSVAAPTAGLHF +L+ + S GI V +VTLHVGAGTF PV+ ++ +DH M
Sbjct: 162 QTIYAKHAGSVAAPTAGLHFDEAVLANIRSRGISVGYVTLHVGAGTFRPVRCDNIEDHKM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I A A+++ K+ G R+++VGTT+LR LE+A ++G + P S T+IFI PG
Sbjct: 222 HREHFTISAELCAAIHATKAAGNRVIAVGTTALRSLESA-VQNGALTPCSRDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+ D LM+NFHLP+STLLMLVSAF G ++ K+Y AI YRF+SYGDTSLL
Sbjct: 281 YEFKICDGLMTNFHLPESTLLMLVSAFIGHKQAMKLYHEAIEKRYRFFSYGDTSLLL 337
>gi|310829217|ref|YP_003961574.1| hypothetical protein ELI_3655 [Eubacterium limosum KIST612]
gi|308740951|gb|ADO38611.1| hypothetical protein ELI_3655 [Eubacterium limosum KIST612]
Length = 344
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 145/358 (40%), Positives = 200/358 (55%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ K+F +DLP IA P RD++RLMV++ I D D+ +LN +D +V
Sbjct: 4 LTTKDFYYDLPEELIAQTPEKKRDASRLMVLNRMEGS---IQDRYFHDIIDYLNEDDLLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKV+ A++ G + ++ L R+ +W +P K G L F
Sbjct: 61 MNNTKVLPARIFGKK----EETGGKVELLLLKRLDDKTWETMVKPGKKAMPGTRLVF--- 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+L+ + DK +G ++ F GI E I +GT+PLPPYI D Y
Sbjct: 114 --GDKLKGEIKDKIESGLRIIEFEYDGI-FEEIIGELGTMPLPPYIHEV----LEDQDRY 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL L GI+ VTLHVG GTF PVK ++ DH M
Sbjct: 167 QTVYAKYTGSAAAPTAGLHFTEELLDALRRKGIRTAEVTLHVGIGTFRPVKCDNILDHHM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
H E + T + + + +GGR+++VGTTS+R LE+A G + G T+IFI P
Sbjct: 227 HEETYQVPKETEKLIEETRKKGGRVIAVGTTSVRTLESAAARFGGKVQACEGSTDIFIYP 286
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY+++ +D L++NFHLP+STLLMLVS+F E K YQHAI YRF+S+GD ++
Sbjct: 287 GYKWQVIDALITNFHLPESTLLMLVSSFYNREAVLKAYQHAIDARYRFFSFGDAMFIY 344
>gi|169350857|ref|ZP_02867795.1| hypothetical protein CLOSPI_01631 [Clostridium spiroforme DSM 1552]
gi|169292443|gb|EDS74576.1| hypothetical protein CLOSPI_01631 [Clostridium spiroforme DSM 1552]
Length = 349
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 145/356 (40%), Positives = 204/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EFDF+LP IA P+ RD++RLMV+ N + H D+ +L D +V
Sbjct: 9 MKLSEFDFELPEELIAQTPLDKRDTSRLMVL--NRENQTIEHKHFY-DIINYLKPGDVLV 65
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L GV+ + L + W ++++K I+ F
Sbjct: 66 RNNTKVIPARLFGVK----EETNGHVEVLLLKDQGNDVWECLVGNARIVKLDTIITF--- 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A ++ + G + GI E + +GT+PLPPYI K +R Y
Sbjct: 119 -GDGLLKAKCLEIKDEGIRVFKMIYDGIFYE-ILDQLGTMPLPPYIKEKLNDQSR----Y 172
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAKI+GS AAPTAGLHFT +++ ++ + GI++ +TLHVG GTF PVKV++ +H M
Sbjct: 173 QTVYAKIEGSAAAPTAGLHFTDDIIRKIKAKGIEILDITLHVGLGTFRPVKVDNVLEHHM 232
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I+ A LN K+ G RI++VGTTS R LE + G T+IFI PG
Sbjct: 233 HSEYYMIEPEVADKLNQAKANGQRIIAVGTTSTRTLEANMQKYGKFTATHENTDIFIYPG 292
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+++A+D L++NFHLPKSTLLML+SAF E K Y AI + YRF+S+GD+ +
Sbjct: 293 YQYQAIDCLITNFHLPKSTLLMLISAFATKEFIFKAYHEAIENKYRFFSFGDSMFI 348
>gi|156973358|ref|YP_001444265.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
harveyi ATCC BAA-1116]
gi|166218756|sp|A7MT82|QUEA_VIBHB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|156524952|gb|ABU70038.1| hypothetical protein VIBHAR_01045 [Vibrio harveyi ATCC BAA-1116]
Length = 350
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 150/370 (40%), Positives = 214/370 (57%), Gaps = 33/370 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N + D SD+ + + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQPERTASRLLQMDGNTG---ELIDGTFSDVLEQVQAGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCH------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
FNNT+VI A+L G + + R E S H+R S + +P I G+
Sbjct: 58 FNNTRVIPARLFGRKESGGKLEVLVERMLNEKSILAHVRCSKSP-----KPGTTILVGEN 112
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
+ +Q +R +A K+N+ + +L + +G +PLPPYI RP +
Sbjct: 113 DEYSAQ-MVARHDALFELKFNSDKTVLEI----------LEEIGHMPLPPYI--DRPDED 159
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D YQT Y + G+VAAPTAGLHF LL ++ + G + +VTLHVGAGTF PVKV+D
Sbjct: 160 ADKERYQTVYNQKPGAVAAPTAGLHFDDVLLEKITAKGAEFAYVTLHVGAGTFQPVKVDD 219
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-----INPW 289
DDH MH+E + A+N+ K+RGGR+V+VGTTS+R LE+A +D + + P+
Sbjct: 220 IDDHHMHAEYVEVPQDVVDAINATKARGGRVVAVGTTSVRSLESA-AQDALKKGTELVPF 278
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
G T IFI PGY ++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ + YRF+S
Sbjct: 279 FGDTEIFIYPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYENTMNAYKHAVENKYRFFS 338
Query: 350 YGDTSLLFQK 359
YGD+ + +K
Sbjct: 339 YGDSMFIKKK 348
>gi|256822291|ref|YP_003146254.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Kangiella
koreensis DSM 16069]
gi|256795830|gb|ACV26486.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Kangiella
koreensis DSM 16069]
Length = 365
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 146/368 (39%), Positives = 209/368 (56%), Gaps = 39/368 (10%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++F FDLP IA P R ++RL+ + + V H +L LN ND +V
Sbjct: 1 MRLEDFHFDLPDELIARYPTEQRSASRLLCL--DGQSGAVEHKHFY-ELVDLLNPNDLLV 57
Query: 61 FNNTKVITAQLNGVRFCH------INRREKEISCTLHMRVS----PNSWSVYARPSKVIK 110
FN+T+VI A+L G + I R + ++ H+R + P S V KV+
Sbjct: 58 FNDTRVIPARLFGQKVTGGKLEILIERLDSDVEAIAHVRSNRTPKPGSEFVLENGFKVLI 117
Query: 111 KGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKR 170
G R EA L + + + ++ VG +PLPPYI R
Sbjct: 118 TG------------RKEA-----------LFALQLQEGDWQTVMTAVGHMPLPPYIDRAD 154
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
+ ++ YQT Y+K+ G+VAAPTAGLHF LL ++ + GI FVTLHVGAGTF PV
Sbjct: 155 ELSDKER--YQTVYSKVDGAVAAPTAGLHFDDALLEKIGNKGIDSTFVTLHVGAGTFSPV 212
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWS 290
+VE+ +H MHSE + +N+ +++GGR+++VGTTS+R LE+A+ +G I P
Sbjct: 213 RVENITEHKMHSEWFEVSQEVCDKVNAARAKGGRVIAVGTTSVRCLESASA-NGYIQPHM 271
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G T+IFI PGY+FR+VD L++NFHLP+STL+MLVSAF G + Y A+ AYRF+SY
Sbjct: 272 GETDIFIYPGYQFRSVDALITNFHLPESTLMMLVSAFAGKDHIMNAYNEAVKEAYRFFSY 331
Query: 351 GDTSLLFQ 358
GD+ + Q
Sbjct: 332 GDSMFIHQ 339
>gi|300087727|ref|YP_003758249.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Dehalogenimonas lykanthroporepellens BL-DC-9]
gi|299527460|gb|ADJ25928.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Dehalogenimonas lykanthroporepellens BL-DC-9]
Length = 343
Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 140/357 (39%), Positives = 206/357 (57%), Gaps = 22/357 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F++ LP + IA P PRDS+RL+V++ + I D+ +L DA+V
Sbjct: 1 MKTADFNYHLPENLIAQTPAEPRDSSRLLVLNRDTGS---IEHRRFRDIIDYLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+++VI A+L G +F +I L R + N W +PSK + G + Q
Sbjct: 58 FNDSRVIPARLYGHKFG----TGAKIEALLLTRKAGNEWQALLKPSKKLSPGTKVELHDQ 113
Query: 121 DGQ-SRLEATVIDKWNTGEILLVFSISGIEL--ERQISLVGTIPLPPYIARKRPIDARDY 177
GQ S + V+ K G I+ I + E ++ +G + LPPYI + R
Sbjct: 114 SGQDSGVTFEVLSKSEDG-------IADIRISDENRLQDLGILALPPYIHHRLDEPER-- 164
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT Y++I GSVAAPTAGLHFT LL + S GIK+ FVTLH+G TF PVK E+ +
Sbjct: 165 --YQTVYSRINGSVAAPTAGLHFTPELLKTIESKGIKLLFVTLHIGLDTFRPVKEENPAN 222
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-INPWSGFTNIF 296
H +H E + TA+A+N VK++GGR+ VGT+++R LE A G+ + P+ G+ +F
Sbjct: 223 HPIHREFAILTKETAEAINEVKAKGGRVYGVGTSAVRTLEWAAKNYGLPLQPFEGWVELF 282
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
I PG+ +R +D L++NFHLP T LML +AF G + K+ Y+ A+ YRF+S+GD+
Sbjct: 283 ILPGFEYRVIDRLITNFHLPCGTPLMLTAAFAGWDNVKRAYEAAVVEEYRFFSFGDS 339
>gi|282889609|ref|ZP_06298150.1| hypothetical protein pah_c002o060 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281500532|gb|EFB42810.1| hypothetical protein pah_c002o060 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 345
Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 148/352 (42%), Positives = 195/352 (55%), Gaps = 17/352 (4%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
+ FDLP IA P PRD +RLMVV ++S+ +L FL D+++FNNTK
Sbjct: 11 YHFDLPQELIAQHPCTPRDHSRLMVVDRGSG---ILSEIPFYELADFLQKGDSLIFNNTK 67
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSR 125
VI A+L G R + L + S +W V +P K + G + F
Sbjct: 68 VIPARLLGKRLT-----GGQAEVFLKAQRSDGTWEVLVKPGKQLGLGSKVIF-----SET 117
Query: 126 LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYA 185
++D G + F G + + + G IPLP YI R+ P D YQT YA
Sbjct: 118 FFCEIVDVLPEGARCVRFFHEG-DFNQVLEQHGKIPLPKYIKRE-PDVKEDGERYQTVYA 175
Query: 186 KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIG 245
G+VAAPTAGLHFT LL+R+ S G++ VTLHVG GTF+P+KVED DH MH E
Sbjct: 176 AHPGAVAAPTAGLHFTQPLLNRITSKGVERIEVTLHVGLGTFLPIKVEDIRDHQMHDESF 235
Query: 246 FIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRA 305
I AQ LN+ S GR + +GTTS R LE+A II P T+IFI+PGY+FR
Sbjct: 236 LISVQAAQQLNNPSS--GRQICIGTTSCRALESAAGHSSIIQPGEYSTDIFISPGYQFRK 293
Query: 306 VDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ L++NFHLP S+LL+LVS F G E ++ YQ A+ +RFYSYGD L+
Sbjct: 294 MQALLTNFHLPCSSLLVLVSTFAGHELIREAYQKAVKEKFRFYSYGDAMLIL 345
>gi|254374630|ref|ZP_04990111.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
novicida GA99-3548]
gi|151572349|gb|EDN38003.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
novicida GA99-3548]
Length = 340
Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 138/357 (38%), Positives = 211/357 (59%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LP IA P+ RD++RL+ ++ I D+ +D F+N D +V
Sbjct: 3 MKTDDFDYKLPEELIASYPLENRDASRLLKLNKQTGE---IVDYKFTDFIDFINPGDLLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV+ A+L G + ++ + +P + + + ++ G ++
Sbjct: 60 FNNSKVMLARLYGSKTTG-----AKLEYLIERIKTPKLFETHIKANRSPAIGSEIYV--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ L A V+DK G + L+ ++ R + G IPLPPY+ KR + D Y
Sbjct: 112 --EDTL-AKVLDK--DGGMYLLEIQGDKDIYRLMEEFGHIPLPPYM--KRDDEEFDAERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GSVAAPTAGLHF+ L+ ++ G+ + ++TLHVG+GTF PV+V+D + H M
Sbjct: 165 QTVYAQDLGSVAAPTAGLHFSKELMQQIKDKGVDIAYITLHVGSGTFKPVQVDDVESHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E+ + Q + K GGR++++GTTS+R LETA ++G I P+ G T+IF+ PG
Sbjct: 225 HAEVISVPVEVCQKIRQTKENGGRVIAIGTTSVRSLETA-GQNGQIEPYQGETDIFLYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F VD +++NFHLPKSTL+MLVSAF G E+ K Y+HAI+ YRF+SYGD +F
Sbjct: 284 KKFNVVDAMITNFHLPKSTLIMLVSAFAGKEKIIKAYEHAIAERYRFFSYGDAMFIF 340
>gi|288940036|ref|YP_003442276.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Allochromatium vinosum DSM 180]
gi|288895408|gb|ADC61244.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Allochromatium vinosum DSM 180]
Length = 343
Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 143/363 (39%), Positives = 209/363 (57%), Gaps = 27/363 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F ++LP IA P+ R +RL+V+ + + P D + +DLP+ L +D ++
Sbjct: 1 MRRSDFHYELPAELIAQHPLPERSGSRLLVLDGSQTPP---RDRMFTDLPSLLKPHDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+V+ A+L F H ++ + + + R SK K G
Sbjct: 58 FNNTQVMRARL----FGH-KETGGQVEILIERLLDAREALAHVRASKSPKPG-------- 104
Query: 121 DGQSRLEATVIDKWNT--GEILLVFSISGIELE--RQISLVGTIPLPPYIARKRPIDARD 176
SR+ T W + G +F + +E + Q++ G +PLPPYI +RP D D
Sbjct: 105 ---SRIRVT-DGAWLSVVGREGDLFRLRALESDFGEQMARHGHMPLPPYI--QRPDDVLD 158
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT +A+ G+VAAPTA LHF +L+RL ++G+ +TLHVGAGTF PV+ +D +
Sbjct: 159 ESRYQTVFARRTGAVAAPTAALHFDEPMLARLDALGVARAEITLHVGAGTFQPVREDDLE 218
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H MHSE +D + + + GGR+++VGTTS+R LETA DG + P+ G + +F
Sbjct: 219 RHHMHSEWLEVDETVCERIERTRQLGGRVIAVGTTSVRSLETAAA-DGRLRPFRGESRLF 277
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGYRFR VD +++NFHLP+STLLMLV+AF G E K Y+HAI YRF+SYGD L
Sbjct: 278 IRPGYRFRVVDAMITNFHLPESTLLMLVAAFSGYSEIMKAYRHAIDQRYRFFSYGDAMFL 337
Query: 357 FQK 359
++
Sbjct: 338 TRQ 340
>gi|241767174|ref|ZP_04764931.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Acidovorax
delafieldii 2AN]
gi|241362214|gb|EER58268.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Acidovorax
delafieldii 2AN]
Length = 406
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 149/377 (39%), Positives = 211/377 (55%), Gaps = 29/377 (7%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF LPP+ IA P R ++RL+ L +D + +LP L + D +VFN
Sbjct: 38 LSDFDFALPPALIAQHPASERSASRLLD-----GRQLPPTDRIFRELPGLLRAGDLLVFN 92
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPS-------KVIKK---G 112
+T+V+ A++ G + + E I L N+ KV KK G
Sbjct: 93 DTRVVKARIFGEK-ASGGKLELLIERVLPAEARENAAGTAGGTGNEVVAHMKVSKKPLPG 151
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGE-ILLVFSISGIELERQISLV---GTIPLPPYIAR 168
+H +AT++ +W T + L F++ G E L+ G +PLPPYI R
Sbjct: 152 STVHMAGGRHAGGFDATLLSRWPTEDGPLFRFALHGPAGESPWELMERHGHLPLPPYIER 211
Query: 169 KR-----PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVG 223
++ P A D YQT +A+ G+VAAPTA LHF ++L+ + + GI+ VTLHVG
Sbjct: 212 QQHTGNDPDAAEDSQRYQTVFARAPGAVAAPTAALHFDESVLAEMAARGIERASVTLHVG 271
Query: 224 AGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED 283
AGTF PVK E+ +H MHSE + T AL + RGGR+V+VGTT++R LE+
Sbjct: 272 AGTFQPVKTENLAEHQMHSEWYEVPLATLAALERCRQRGGRVVAVGTTTVRTLESWARSG 331
Query: 284 GIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISH 343
SG T IFITPG+ F+ VD+L++NFHLPKSTL+MLVSAF G E +Y+HAI+
Sbjct: 332 QA----SGDTAIFITPGFAFQVVDVLLTNFHLPKSTLMMLVSAFAGYEHVMALYRHAIAQ 387
Query: 344 AYRFYSYGDTSLLFQKR 360
YRF+SYGD LL +++
Sbjct: 388 EYRFFSYGDAMLLERRK 404
>gi|330431785|gb|AEC16844.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Gallibacterium anatis UMN179]
Length = 356
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 155/376 (41%), Positives = 212/376 (56%), Gaps = 38/376 (10%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N S H D+ F+N D +V
Sbjct: 1 MRVSDFYFDLPDELIARYPQKERTASRLLKLDGNSG---EFSHHHFKDVLDFVNEGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCH------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
FNNT+VI A++ G + + R + SC H+R S K K+G
Sbjct: 58 FNNTRVIPARMYGRKSSGGKVEVLVERVLDQKSCLAHIRAS-----------KAPKEGSE 106
Query: 115 LHFFSQDGQSRL-EATVIDKWNTGE----ILLVFSISGIELERQISLVGTIPLPPYIARK 169
L G+ +L E + G L F I G L+ + +G IPLPPYI
Sbjct: 107 LIL----GEDKLGEGNGVRARMVGRSDSLFHLQFDIEGSLLD-TLQQIGHIPLPPYI--D 159
Query: 170 RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
RP + D YQT Y+KI G+VAAPTAGLHF LL+ L + G+K+ FVTLHVGAGTF P
Sbjct: 160 RPDEDADQERYQTVYSKIPGAVAAPTAGLHFDEELLAALRAKGVKMAFVTLHVGAGTFQP 219
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDG--- 284
V+VE+ +DH MHSE + A+ + K+ G R+++VGTTS+R LE+A E+
Sbjct: 220 VRVENIEDHHMHSEYAEVPQEVVDAVLATKAAGKRVIAVGTTSVRSLESAALAAEEKQSM 279
Query: 285 -IINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISH 343
+I P+ T IFI PG +FR VD L++NFHLP+STL+MLVSAF G + + Y++A+ +
Sbjct: 280 QLIEPFFADTAIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYDNIMRAYRNAVEN 339
Query: 344 AYRFYSYGDTSLLFQK 359
YRF+SYGD L +K
Sbjct: 340 RYRFFSYGDAMFLIKK 355
>gi|319778539|ref|YP_004129452.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Taylorella
equigenitalis MCE9]
gi|317108563|gb|ADU91309.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Taylorella
equigenitalis MCE9]
Length = 350
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 143/354 (40%), Positives = 215/354 (60%), Gaps = 25/354 (7%)
Query: 4 KEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNN 63
++F ++LP RIA RP R ++L+ V + S D + L +D ++FN+
Sbjct: 9 EDFFYELPADRIAQRPTEKRTESKLLHVGADGSW----DDLTFPQIKNLLKKDDLLIFND 64
Query: 64 TKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQ 123
T+VI A+L G + +I C + ++P V+ R SK + G L FF++
Sbjct: 65 TRVIKARLFGQK-----STGGKIECLIERVIAPKCAIVHLRFSKRPQSGSQL-FFNEG-- 116
Query: 124 SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTT 183
+ ATVID+ + E L FS +++ + +G +PLPPYI K D DY YQT
Sbjct: 117 --ITATVIDQ-SVDEFTLEFSEPVMDV---LDHIGQLPLPPYI--KHNPDDFDYERYQTV 168
Query: 184 YAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSE 243
YAK +G++AAPTAGLHF +NL++ L +GI+ VTLHVG+GTF PV + DHIMHSE
Sbjct: 169 YAKSEGAIAAPTAGLHFDNNLINELTDMGIQKSMVTLHVGSGTFKPVVTSNLKDHIMHSE 228
Query: 244 IGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-----EDGIINPWSGFTNIFIT 298
+ T ++++ + GGR+++VGTTS+R +E+A T E G+ P++G T +FIT
Sbjct: 229 WFEVTEETCESISRCRRNGGRVIAVGTTSVRAIESAATLAGLSEKGVPLPYTGDTKLFIT 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PGY+ +D +++NFHLP+STLLMLV+++ G E K+Y+HA+ YRF+SYGD
Sbjct: 289 PGYKPLVIDGMITNFHLPESTLLMLVASWMGFETMHKIYKHAVEANYRFFSYGD 342
>gi|163802454|ref|ZP_02196347.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio sp.
AND4]
gi|159173755|gb|EDP58570.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio sp.
AND4]
Length = 350
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 150/370 (40%), Positives = 213/370 (57%), Gaps = 33/370 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N + D +D+ + + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQPERTASRLLQMDGNTG---ELVDGTFTDVLDQIQAGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCH------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
FNNT+VI A++ G + + R E S H+R S + +P I G+
Sbjct: 58 FNNTRVIPARMFGRKESGGKLEVLVERMLDEKSILAHVRCSKSP-----KPGTTILVGEN 112
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
+ +Q +R +A K+N + +L + +G +PLPPYI RP D
Sbjct: 113 DEYTAQ-MVARHDALFELKFNADKTVLEI----------LEEIGHMPLPPYI--DRPDDD 159
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D YQT Y + G+VAAPTAGLHF LL ++ + G + +VTLHVGAGTF PVKV+D
Sbjct: 160 SDKERYQTVYNQKPGAVAAPTAGLHFDDILLEKIKAKGAEFAYVTLHVGAGTFQPVKVDD 219
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-----INPW 289
+DH MH+E + A+N+ K+RGGRIV+VGTTS+R LE+A +D + + P+
Sbjct: 220 INDHHMHAEYVEVPQEVVDAINATKARGGRIVAVGTTSVRSLESA-AQDALKKGTELVPF 278
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
G T IFI PGY ++ VD L++NFHLP+STL+MLVSAF G E T YQHA+ + YRF+S
Sbjct: 279 FGDTEIFIYPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYENTMNAYQHAVENQYRFFS 338
Query: 350 YGDTSLLFQK 359
YGD+ + +K
Sbjct: 339 YGDSMFIKKK 348
>gi|268611591|ref|ZP_06145318.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Ruminococcus flavefaciens FD-1]
Length = 343
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 144/353 (40%), Positives = 200/353 (56%), Gaps = 16/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
++ +F +DLP IA PV PR+++R+M V + + DH +L L D +V
Sbjct: 3 LLKSDFYYDLPEELIAQHPVEPRNASRMMCV--DRRTGEISHDHFY-NLCDHLREGDLLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+++VI A+L G + + + I L + W + RP K K G F
Sbjct: 60 MNDSRVIPARLYGEKVGN----QTFIEFLLLEQKGDKLWEIICRPGKKAKVGTKFSF--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V++ + G ++ F G + VG +PLPPYI K R Y
Sbjct: 113 -GGGRLVAEVVEVKDDGNRIVKFECEG-NFFTALEDVGQMPLPPYIKEKLENKER----Y 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ GS AAPTAGLHFT +L L S GIK FVTLHVG GTF PVK ++ DH M
Sbjct: 167 QTVYSRELGSAAAPTAGLHFTPEMLDDLRSRGIKTAFVTLHVGLGTFRPVKEDNVLDHKM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA +N K+ GGR+++VGTT+ R LE+ T G I+ G+T+IFI P
Sbjct: 227 HSEHYHLPQETADLINETKANGGRVIAVGTTTCRTLESVATFYGDISEHDGYTDIFIYPS 286
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
Y F+ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+S+GD+
Sbjct: 287 YEFKCIDGLITNFHLPESTLIMLVSAFMGYDNTMNAYKTAVEEKYRFFSFGDS 339
>gi|241668246|ref|ZP_04755824.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
philomiragia subsp. philomiragia ATCC 25015]
gi|254876780|ref|ZP_05249490.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
philomiragia subsp. philomiragia ATCC 25015]
gi|254842801|gb|EET21215.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
philomiragia subsp. philomiragia ATCC 25015]
Length = 338
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 139/361 (38%), Positives = 211/361 (58%), Gaps = 27/361 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LP IA P+ RD++RL+ ++ I DH +D F+N D ++
Sbjct: 1 MRTDDFDYKLPEELIASYPLENRDASRLLKLNKQTGE---ILDHKFTDFIDFINPEDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV----SPNSWSVYARPSKVIKKGDILH 116
FNN+KV+ A+L G EK L + +P + + + ++ G
Sbjct: 58 FNNSKVMLARLYG---------EKTTGAKLEYLIERVKTPKIFETHIKANRSPAIGS--E 106
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
+ QD ++ V++K G + L+ ++ + + G IPLPPY+ KR + D
Sbjct: 107 IYVQDTLAK----VLEK--DGGMYLLELQGNKDIYQLMEEFGHIPLPPYM--KRDDEEFD 158
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK GSVAAPTAGLHF+ L+ ++ + G + ++TLHVG+GTF PV+V+D +
Sbjct: 159 AERYQTVYAKDLGSVAAPTAGLHFSEELMQQIKAKGTDIAYITLHVGSGTFKPVQVDDVN 218
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+H MHSE+ + + + K+ GGR++++GTTS+R LETA + G I P+ G T+IF
Sbjct: 219 NHKMHSEVISVSEDVCEKIRQTKANGGRVIAIGTTSVRSLETA-GQSGEIQPYQGETDIF 277
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ PG +F VD +++NFHLPKSTL+MLVSAF E+ K Y+HAI+ YRF+SYGD +
Sbjct: 278 LYPGKKFNIVDAMITNFHLPKSTLIMLVSAFADKEKIMKAYEHAIAEKYRFFSYGDAMFI 337
Query: 357 F 357
F
Sbjct: 338 F 338
>gi|170723507|ref|YP_001751195.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
putida W619]
gi|229619924|sp|B1JDS3|QUEA_PSEPW RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|169761510|gb|ACA74826.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Pseudomonas putida W619]
Length = 349
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 150/360 (41%), Positives = 209/360 (58%), Gaps = 28/360 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R +RL+V L P ++ +DL +L D +
Sbjct: 1 MRVADFSFELPDSLIARHPLAERHGSRLLV----LDGPSGALAHKQFTDLLDYLRPGDLM 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + ++ + + + + R SK K+G ++
Sbjct: 57 VFNNTRVIPARLFGQKASG-----GKLEVLVERVLDSHRVLAHVRASKAPKEGAVI-LID 110
Query: 120 QDGQSRLEA---TVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
G++ + A T+ + T E+L + LER VG +PLPPYI RP D D
Sbjct: 111 GGGEAEMVARHDTLFELRFTEEVLPL-------LER----VGHMPLPPYI--DRPDDGAD 157
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YA+ G+VAAPTAGLHF LL ++ + G++ FVTLHVGAGTF PV+V+ +
Sbjct: 158 RERYQTVYAERAGAVAAPTAGLHFDQALLDKIAAKGVERAFVTLHVGAGTFQPVRVDKIE 217
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
DH MH E + A+ + ++RGGR+V+VGTTS+R LE+A DG++ +SG T+IF
Sbjct: 218 DHHMHKEWLEVSQDVVDAIEACRARGGRVVAVGTTSVRSLESA-ARDGVLKAFSGDTDIF 276
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PG F VD L++NFHLP+STLLMLVSAF G ET Y A+ YRF+SYGD +
Sbjct: 277 IYPGRPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAVEQGYRFFSYGDAMFI 336
>gi|212696227|ref|ZP_03304355.1| hypothetical protein ANHYDRO_00763 [Anaerococcus hydrogenalis DSM
7454]
gi|212676856|gb|EEB36463.1| hypothetical protein ANHYDRO_00763 [Anaerococcus hydrogenalis DSM
7454]
Length = 340
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 145/356 (40%), Positives = 199/356 (55%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++FD++LP IA P RD +RLMVV D D+ +LN D +V
Sbjct: 1 MRTEDFDYNLPEELIAQHPADKRDFSRLMVVDRKTGQR---EDKHFYDIIDYLNEGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L F H +E++I L + + W V +P K +K G F
Sbjct: 58 MNDTRVIPARL----FGHRPEKEEKIEVFLLENIEKDKWEVLVKPGKKMKIGTKCIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L V+D G ++ FS GI + + +G +PLPPYI K +D Y
Sbjct: 111 --SDELSLEVVDIKEDGNRVVEFSYEGI-FQEILDRLGNMPLPPYIKEK----LKDKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GSVAAPTAGLHFT LL ++ G+K+ F+TL+VG GTF PVKV+D +H M
Sbjct: 164 QTVYSKNPGSVAAPTAGLHFTKELLKKIEDKGVKLAFITLNVGLGTFRPVKVDDVKNHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I +A +N K RI+S GTT+ R LE+ ++G I SG+T+IFI PG
Sbjct: 224 HSEYYQISKESADLINETKKNNKRIISTGTTTTRTLESVFKKNGQIKEDSGWTDIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
++F +D ++NFHLPKSTL+MLVSA E Y+ A+ YRF+S+GD L
Sbjct: 284 FKFNVIDCQITNFHLPKSTLIMLVSALANKEIILDAYKDAVEKKYRFFSFGDAMFL 339
>gi|32473565|ref|NP_866559.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodopirellula baltica SH 1]
gi|32398245|emb|CAD78340.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodopirellula baltica SH 1]
Length = 402
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 148/369 (40%), Positives = 204/369 (55%), Gaps = 25/369 (6%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
+D++LP IA P+ R ARLMV+ I H V DLP L + D +V NN++
Sbjct: 40 YDYELPRELIAQEPLQNRVDARLMVID---RASGEIEHHHVRDLPQLLRAEDVMVKNNSR 96
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSR 125
V+ A+L G R R + L + W + + ++ G+ + +D ++
Sbjct: 97 VVPARLFGRRTKTGGRWQ---GLFLRSDRATGVWELLTKTRGTLQTGETITLDDRDARAG 153
Query: 126 LEATVIDKWNTGEILLV----FSISG----IELERQISLVGTIPLPPYIARKRPIDARDY 177
E VI + + G +L+ S G IE + + G +P+PPYI +DA D
Sbjct: 154 GELMVIGRDDQGHLLVQPVPNESFEGPPQAIEPGKWLDKYGRVPIPPYIRDGHMVDA-DV 212
Query: 178 VDYQTTYAKIQ----GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
+YQT +A GSVAAPTAGLHFT LL + VTLHVG GTF P++V+
Sbjct: 213 TNYQTVFASTNPEDAGSVAAPTAGLHFTKQLLDEIAKGQTASAEVTLHVGIGTFRPIEVD 272
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA------TTEDGIIN 287
D D H MH E G ID + +N +S GGR V+VGTTS+R+LE+ T G+
Sbjct: 273 DIDQHQMHEEWGRIDEDAVETINDRRSGGGRCVAVGTTSVRVLESCVANRNETNGRGVAA 332
Query: 288 PWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
W+G T+IFI P YRF VD LM+NFHLPKS+LL+LVSAF G E ++ YQ AI++ YRF
Sbjct: 333 TWTGATDIFIKPPYRFGVVDALMTNFHLPKSSLLVLVSAFAGHELIRRAYQEAIANEYRF 392
Query: 348 YSYGDTSLL 356
+SYGD L+
Sbjct: 393 FSYGDAMLI 401
>gi|298208116|ref|YP_003716295.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Croceibacter atlanticus HTCC2559]
gi|83848037|gb|EAP85907.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Croceibacter atlanticus HTCC2559]
Length = 351
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 147/360 (40%), Positives = 201/360 (55%), Gaps = 16/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F FDLP + +A RP RD ARLMV++ I DL + +D +V
Sbjct: 3 MKLSNFGFDLPENLLADRPAENRDEARLMVLNRKEQT---IEHKQFKDLIDYFEPDDVLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + I L ++P + W V P++ I+ G+ L+F
Sbjct: 60 LNNTKVFPARLYGNK----EKTGARIEVFLLRELNPETRLWDVLVDPARKIRIGNKLYF- 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDARD 176
D +S L A VID + L F G E +++ +G PLP YI KR ++ D
Sbjct: 115 -GDDES-LVAEVIDNTTSRGRTLRFLYDGSYEEFRKKLKDLGETPLPKYI--KREVEPDD 170
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT +AK +G+VAAPTAGLHF+ +LL RL GI VTLHVG GTF PV+VED
Sbjct: 171 AERYQTIFAKEEGAVAAPTAGLHFSKHLLKRLEIKGINFAEVTLHVGLGTFNPVEVEDLS 230
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE +I P + +N S RI +VGTT +R LE+A + G +N + G+TN F
Sbjct: 231 KHKMDSEEAYIAKPATEVVNKAISEKRRICAVGTTVMRTLESAVSSSGTLNEFGGWTNKF 290
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH PKSTLLM+ +AF G E T++ Y A+ Y FY+YGD L+
Sbjct: 291 IFPPYDFSIANCMVTNFHTPKSTLLMMTAAFAGHEFTQRAYAEAVKEKYNFYTYGDAMLI 350
>gi|293607153|ref|ZP_06689495.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Achromobacter piechaudii ATCC 43553]
gi|292814487|gb|EFF73626.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Achromobacter piechaudii ATCC 43553]
Length = 352
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 147/366 (40%), Positives = 208/366 (56%), Gaps = 41/366 (11%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ V +F++DLPP IA P R +RL+ +L + D +DL L +D +V
Sbjct: 5 LTVSDFNYDLPPELIAQTPAATRTGSRLL----HLDAASQLHDRQFADLIGLLRPDDLLV 60
Query: 61 FNNTKVITAQLNGVRFCH------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
FN+T+VI A+L G + + R + H+R S + P V++ D
Sbjct: 61 FNDTRVIKARLAGHKITGGKVEVLVERITESDRVLAHVRASKSPG-----PGMVLRLADA 115
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLV-FSISGIELERQISLVGTIPLPPYIARKRPID 173
EATV+ + GE+ + F ++L + G PLPPYI D
Sbjct: 116 F-----------EATVLGR--EGELFDIRFPGPVLDL---LDAHGATPLPPYITHA--AD 157
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
+ D YQT YA+ G+VAAPTAGLHF L RL +GI FVTLHVGAGTF PV+V+
Sbjct: 158 SGDDDRYQTVYAREPGAVAAPTAGLHFDQPTLDRLADLGIARAFVTLHVGAGTFQPVRVD 217
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT------TEDGI-I 286
+ DH+MH+E + T A+ + +++GGR+++VGTTS+R LE+A T DG+ +
Sbjct: 218 NLADHVMHAEWFTVPQATVDAIAATRAKGGRVIAVGTTSVRALESAAAQTEGRTADGLPL 277
Query: 287 NPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYR 346
G T +FITPGYR+R VD L++NFHLP+STLLMLVSA G+E ++ Y HA++ YR
Sbjct: 278 AAAQGDTRLFITPGYRYRVVDALVTNFHLPQSTLLMLVSALAGVEPIRRAYAHAVAQRYR 337
Query: 347 FYSYGD 352
F+SYGD
Sbjct: 338 FFSYGD 343
>gi|163753005|ref|ZP_02160129.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Kordia
algicida OT-1]
gi|161326737|gb|EDP98062.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Kordia
algicida OT-1]
Length = 351
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 148/359 (41%), Positives = 197/359 (54%), Gaps = 22/359 (6%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
F+FDLP +A P RD ARLMV++ I DL + + D +V NNTK
Sbjct: 8 FNFDLPEDLLAEYPSEHRDEARLMVLNREKQT---IEHKKFKDLVDYFDEGDVMVLNNTK 64
Query: 66 VITAQLNGVRFCHINRREK-----EISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
V A+L G +EK E+ + W V P++ I+ G+ L+F
Sbjct: 65 VFPARLFG-------NKEKTGARIEVFLLRELNEDQRLWDVLVDPARKIRIGNKLYFGED 117
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ L A VID + L F G E ++ +G PLP YI KR ++ D
Sbjct: 118 ES---LVAEVIDNTTSRGRTLRFLYDGSYEEFRTKLGELGQTPLPKYI--KRDVEPEDEE 172
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YAK +G+VAAPTAGLHF+ +LL RL GI VTLHVG GTF PV+VED H
Sbjct: 173 RYQTIYAKEEGAVAAPTAGLHFSKHLLKRLEIKGIDFAEVTLHVGLGTFNPVEVEDLSKH 232
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
M SE I+AP +N+ K+R R+ +VGTT +R LE++ + D +N + G+TN FI
Sbjct: 233 KMDSEELKIEAPAVATVNNAKTRKQRVCAVGTTVMRALESSVSSDLTLNEYEGWTNKFIF 292
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
P Y F + +++NFH PKSTLLM+VSAF G E K Y+ AI Y+FYSYGD L+
Sbjct: 293 PPYEFSIANCMITNFHTPKSTLLMMVSAFAGHEFILKAYEEAIKEGYQFYSYGDAMLIL 351
>gi|78044043|ref|YP_360348.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Carboxydothermus hydrogenoformans Z-2901]
gi|91207417|sp|Q3ABY6|QUEA_CARHZ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|77996158|gb|ABB15057.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Carboxydothermus hydrogenoformans Z-2901]
Length = 338
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 143/356 (40%), Positives = 203/356 (57%), Gaps = 19/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +K+FD+ LP IA P+ RD +RL+V+ I+ + +L +L D +V
Sbjct: 1 MKLKDFDYYLPEELIAQTPLEKRDESRLLVLKRQTGE---ITHDVFKNLKKYLVPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N T+VI A+L GVR + E+ L R++ W V +P + + G L F
Sbjct: 58 VNKTRVIPARLFGVR-----EQGGEVEILLVKRMNFREWEVLVKPGRRARVGTRLIF--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
LE ++ + G I+ FS G+ E ++ +G PLPPYI K +D Y
Sbjct: 110 -APGVLEGEIVAQTEVGRII-KFSFQGV-FEEILNQLGQTPLPPYIKEK----LKDPERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT L+S L G++ V LHVG GTF PVK E+ +H M
Sbjct: 163 QTIYAKEPGSAAAPTAGLHFTRELISELKDYGVEFAEVLLHVGLGTFKPVKTENILEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I+ A+ +N K G R+++VGTT +R+LE+ + G + P G+T++FI PG
Sbjct: 223 HEEYYEIENEAAEKVNKAKREGRRVIAVGTTVVRVLES-VADKGQVAPAKGYTDLFIYPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ F+ +D L++NFHLPKSTLLMLVSAF G E+ Y+ A+ YRF+S+GD L+
Sbjct: 282 FNFQIIDGLITNFHLPKSTLLMLVSAFAGREKVLNAYEIAVRLRYRFFSFGDAMLI 337
>gi|315923966|ref|ZP_07920194.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pseudoramibacter alactolyticus ATCC 23263]
gi|315622806|gb|EFV02759.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pseudoramibacter alactolyticus ATCC 23263]
Length = 349
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 142/358 (39%), Positives = 202/358 (56%), Gaps = 13/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++F +DLP IA P RD +RLM ++ I D D+ +LN D +V
Sbjct: 4 LRTEDFYYDLPERLIAQTPAEKRDDSRLMAINRATDA---IEDRHFHDIIDYLNPGDLLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A++ G R R + L R+ W +P + + G L F+
Sbjct: 61 MNDTKVLPARIFG-RKADTGAR---VELLLLTRLDDYRWETMVKPGRKARPGTTLDFYDA 116
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L T+ + G ++ F G+ E + ++GT+PLPPYI +R Y
Sbjct: 117 AGARVLRGTIEKTVDGGLRVIRFEYDGV-FEAILDVIGTMPLPPYIHETLEDQSR----Y 171
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GS AAPTAGLHFT LL + + G+ + VTLHVG GTF PVK + +H M
Sbjct: 172 QTVYAEHDGSAAAPTAGLHFTDALLGAIAAKGVGLAKVTLHVGIGTFRPVKAANIREHHM 231
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + TA+A+ + K+ GGRI++VGTT++R LE+ A DG I G T+IFI P
Sbjct: 232 HSERYLVPKETAEAIAATKTAGGRIIAVGTTTVRTLESVARDHDGKIVAAGGSTDIFIYP 291
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
G+ ++ VD L++NFHLP+STLLMLVS+F ++ YQHAI YRF+S+GD L+
Sbjct: 292 GFHWQVVDALITNFHLPESTLLMLVSSFYDRKKILAAYQHAIDENYRFFSFGDAMFLY 349
>gi|157363524|ref|YP_001470291.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Thermotoga
lettingae TMO]
gi|157314128|gb|ABV33227.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Thermotoga
lettingae TMO]
Length = 329
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 142/356 (39%), Positives = 197/356 (55%), Gaps = 28/356 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD+ LP IA PV PRD++RLM+++ I + D+ +LN D +V
Sbjct: 1 MKVSDFDYILPDELIAQNPVEPRDTSRLMILNRKSRN---IEHRIFRDIVEYLNPEDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L + I L ++ N W+ +P K +K GDIL+F
Sbjct: 58 LNNTRVIPARL------FAKKANSTIEVLLVEKIGTNLWNCMVKPGKKVKPGDILNF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
A + K + G L F + +L + +G PLPPY+ K PI+ Y
Sbjct: 109 ---ETFTAECLSKADQGMRTLKFETTDEDLFK----LGEAPLPPYVHSKIPIER-----Y 156
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAKI G++A+PTAGLHFT LL ++ S G+ + +TLHVG GTF PVK + DH M
Sbjct: 157 QTIYAKINGAIASPTAGLHFTEELLRKIKSTGVTIAEITLHVGIGTFRPVKTQFVQDHKM 216
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I T + + K GGR+++ GTT +R LE E GI G T +FI P
Sbjct: 217 HPERYQISQDTVKLVEKTKRSGGRVIATGTTVVRALE----EYGINGKLEGETRLFIYPP 272
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ F+ VD +++NFHLPKSTLLMLV+AF G + + Y+ AI YRFYS+GD +
Sbjct: 273 FNFKIVDAMITNFHLPKSTLLMLVAAFAGYDFIMEAYREAIEKRYRFYSFGDAMFI 328
>gi|170077817|ref|YP_001734455.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus sp. PCC 7002]
gi|169885486|gb|ACA99199.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus sp. PCC 7002]
Length = 358
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 155/359 (43%), Positives = 205/359 (57%), Gaps = 23/359 (6%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
+D+DLPP RIA PV PRD +RL+V+ S HLV +L ND +V NNTK
Sbjct: 10 YDYDLPPERIAQTPVTPRDRSRLLVLDSVDSIQHQHFYHLVD----WLQPNDLLVMNNTK 65
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKG-DILHFFSQDGQS 124
VI A+L+G + + L S ++W +P K G +IL D
Sbjct: 66 VIPARLHGRKTTG-----APVEVLLLEERSADTWLALVKPGKRFTLGSEILFTAPHDLSQ 120
Query: 125 RLEATVIDK-WNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVD-YQ 181
L+ATV+D+ TG LL F + + L + G IP PPY+ D+ D YQ
Sbjct: 121 TLKATVVDRDPETGGRLLEFQLRPNQTLWSVLDDFGEIPFPPYVT-----DSEAKPDQYQ 175
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YA+ G+VAAPTAGLHFT + L G++ FVTLHVG GTF PV+VED H MH
Sbjct: 176 TIYAETPGAVAAPTAGLHFTPEVFEALEQKGVEKTFVTLHVGVGTFRPVEVEDITAHDMH 235
Query: 242 SEIGFIDAP--TAQALNSVKSRGGRIVSVGTTSLRLLE-TATTEDGIINPWSGFTNIFIT 298
E +ID P T + + K++GGR+++VGTT +R LE A G + + G TN+FI
Sbjct: 236 YE--WIDVPEETVKKIRETKAKGGRVIAVGTTVVRSLEGMAAASPGELQSFQGQTNLFIY 293
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY ++ VD L++NFHLPKS+LLMLVSA G E +YQ AI+ YRFYS+GD L+
Sbjct: 294 PGYEWQVVDGLITNFHLPKSSLLMLVSALIGRERLLDVYQAAIAQEYRFYSFGDAMLIL 352
>gi|71899186|ref|ZP_00681349.1| Queuosine biosynthesis protein [Xylella fastidiosa Ann-1]
gi|71731044|gb|EAO33112.1| Queuosine biosynthesis protein [Xylella fastidiosa Ann-1]
Length = 347
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 148/356 (41%), Positives = 208/356 (58%), Gaps = 20/356 (5%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+F +DLP IA P+ R ++RLM+V S P D V DLP L D +VFN+T
Sbjct: 6 DFHYDLPEELIAQGPLPERSASRLMLVP---SAPEQFQDCYVRDLPELLQPGDLLVFNDT 62
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQS 124
+VI A+L G + + + + + V R + +K G+ + G
Sbjct: 63 RVIPARLFGRKVSG-----GRVEVLIERFLGTHQAVVQLRTCRSLKVGNRI-LLDAGGH- 115
Query: 125 RLEATVIDKWNTGEI-LLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTT 183
A V+ + GE LL F + LE+ +S VG +PLPPYI R+ D D YQT
Sbjct: 116 ---AEVLGR--DGEFYLLSFDVES-PLEQWLSDVGQLPLPPYIHRE--PDEYDRERYQTV 167
Query: 184 YAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSE 243
+A+ G+VAAPTAGLHF +LL+RL + G++ ++TLHVGAGTF PV+V +H+MHSE
Sbjct: 168 FARAVGAVAAPTAGLHFDESLLARLRARGVEFGYITLHVGAGTFQPVRVALLQEHVMHSE 227
Query: 244 IGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRF 303
+ A + + S ++RGGR+++VGTT +R LE+A G + P+ G T IFI PGY
Sbjct: 228 WFKVGAELVEQVRSARARGGRVIAVGTTVVRSLESAMRH-GELQPFVGETQIFIFPGYCI 286
Query: 304 RAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
R+VD +++NFHLP+STLLMLV+AF G Y HA+ YRF+SYGD LLF +
Sbjct: 287 RSVDAMVTNFHLPESTLLMLVAAFAGRTRILDAYYHAVQQRYRFFSYGDAMLLFPR 342
>gi|329767260|ref|ZP_08258787.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Gemella
haemolysans M341]
gi|328836927|gb|EGF86574.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Gemella
haemolysans M341]
Length = 342
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 150/358 (41%), Positives = 210/358 (58%), Gaps = 19/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLV-SDLPAFLNSNDAI 59
M +++FDF LP IA P+ RD+++L+ V + +H V SD+ + N D +
Sbjct: 1 MKLEQFDFYLPEELIAQTPLLKRDTSKLLCVDRKNNT----HEHKVFSDIIDYFNPGDTL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V NNT+V+ A+L G + I L + N W +P+K IK+G I+ F
Sbjct: 57 VLNNTRVMPARLYGAK----KDTGAAIEVLLLKNLGHNDWECLVKPAKRIKEGSIVSF-- 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G +EA + G F GI ER ++ +GT+PLPPYI + R
Sbjct: 111 --GDGIMEAVCTKVLDDGFRHFEFVYEGIFQER-LNELGTMPLPPYIKERLTDKER---- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y+K GS AAPTAGLHFT+ LL R+ G+ + ++TLHVG GTF PV VE+ +DH
Sbjct: 164 YQTVYSKEVGSSAAPTAGLHFTNELLDRIKEKGVNIAYLTLHVGLGTFRPVAVENIEDHD 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFIT 298
MHSE +D TA+ +N K GR+ SVGTT+ R LET A +G I SG+TNIFI
Sbjct: 224 MHSEYYTLDEKTAELINKTKENEGRVFSVGTTTTRTLETIARDNNGKIVAASGWTNIFIY 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PG+ F+ VD L++NFHLPKS+L+MLVSAF E+ ++Y A+ + YRF+S+GD ++
Sbjct: 284 PGFEFKCVDGLITNFHLPKSSLIMLVSAFYDREKVIELYNIAVENKYRFFSFGDAMII 341
>gi|197118813|ref|YP_002139240.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Geobacter
bemidjiensis Bem]
gi|226713840|sp|B5EFX9|QUEA_GEOBB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|197088173|gb|ACH39444.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Geobacter
bemidjiensis Bem]
Length = 341
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 146/356 (41%), Positives = 207/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD++LPP IA P RD++RL+ + LS I + V+ + A D +V
Sbjct: 1 MFLSDFDYELPPELIAQHPASRRDASRLLTLD-RLSG--AIGEATVASIAAQFLPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L+G + + EI + P WS + SK K G + F
Sbjct: 58 LNDTRVIPARLHGHK---ESGGAVEIFLVRRVAGEPECWSCLIKASKSPKNGCRVVF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ATV+++ + G+ ++F S + + G++PLPPYI KR + D Y
Sbjct: 112 --PGGVTATVLER-DGGDWRVLFEGSD-DFMAWLEQTGSMPLPPYI--KRAPEGEDLERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +G+VAAPTAGLHFT +L + G+++ VTLHVG GTFMP++VED +H M
Sbjct: 166 QTVFAREKGAVAAPTAGLHFTPAILDEIRGRGVEIVSVTLHVGLGTFMPIRVEDLSEHTM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E+ I TA A+ K RGGR+V++GTTSLR LE A G + +IFI PG
Sbjct: 226 HRELYRIPQETAAAIRRTKERGGRVVALGTTSLRALEHAAA-SGEVAAGEREADIFILPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRFR VD L++NFHLPKSTL MLV AF G E + Y+ A+S +RF+SYGD +
Sbjct: 285 YRFRVVDALITNFHLPKSTLFMLVCAFAGKEAMLEAYREAVSRRFRFFSYGDAMFI 340
>gi|86133031|ref|ZP_01051618.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Dokdonia
donghaensis MED134]
gi|85816428|gb|EAQ37619.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Dokdonia
donghaensis MED134]
Length = 349
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 145/363 (39%), Positives = 202/363 (55%), Gaps = 22/363 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F+FDLP +A P RD +RLMV++ I + DL + D +V
Sbjct: 1 MKLSHFNFDLPDELLAEHPAENRDESRLMVLNRKEQT---IEHKMFKDLIDYFEPEDVMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREK-----EISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
NNTKV A+L G +EK E+ + W V P++ I+ G+ L
Sbjct: 58 LNNTKVFPARLYG-------NKEKTGARIEVFLLRELNSETRLWDVLVDPARKIRIGNKL 110
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPID 173
+F D +S L A VID + L F G E ++++ +G PLP YI R+ ++
Sbjct: 111 YF--GDDES-LVAEVIDNTTSRGRTLRFLYDGSYEEFRKKLTSLGETPLPKYINRE--VE 165
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT YAK +G+VAAPTAGLHF+ +LL RL GI VTLHVG GTF V+VE
Sbjct: 166 PEDEERYQTIYAKEEGAVAAPTAGLHFSKHLLKRLEIKGIDFAEVTLHVGLGTFSAVEVE 225
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
D H M SE +I P + +N S R+ +VGTT++R++E+A + G +N +SG+T
Sbjct: 226 DLSKHKMDSEEAYIRKPATEIINKAISEKRRVCAVGTTAMRVMESAVSSSGTLNEFSGWT 285
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
N FI P Y F + +++NFH PKSTLLM+VSAF G + K+ Y A+ Y+FYSYGD
Sbjct: 286 NKFIFPPYDFSIANCMITNFHTPKSTLLMMVSAFAGHDFMKRAYDEAVKEKYKFYSYGDA 345
Query: 354 SLL 356
L+
Sbjct: 346 MLI 348
>gi|302874955|ref|YP_003843588.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Clostridium
cellulovorans 743B]
gi|307690427|ref|ZP_07632873.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
cellulovorans 743B]
gi|302577812|gb|ADL51824.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Clostridium
cellulovorans 743B]
Length = 341
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 140/356 (39%), Positives = 203/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK++ +DLP IA P + L + + D+ L++ D +V
Sbjct: 1 MDVKDYYYDLPEELIAQHP---SEERDLCRLLLLDKISGETEHKIFKDIIDELHTGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + ++ L R+ ++W +P K K G F
Sbjct: 58 LNDTRVLPARLIGEK----EDTHGKMEFLLLKRIEKDTWQALVKPGKRAKIGSRFSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A V+D + G ++ F GI E + +G +PLPPYI K +D ++ Y
Sbjct: 111 -GDGILKAEVVDISDEGSRIIKFFYDGI-FEEVLDSLGEMPLPPYITEK--LDDKE--KY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT LLS++ + GIK+ ++TLHVG GTF PVKV+ ++H M
Sbjct: 165 QTVYSKNNGSAAAPTAGLHFTKELLSKIEAKGIKIAYLTLHVGLGTFRPVKVDKIEEHFM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + T+ +NS K+ GGRI+ VGTTS+R LET +DG + G+T+IFI PG
Sbjct: 225 HSEYFNVSEETSNIINSTKANGGRIICVGTTSVRTLETVAEKDGKVIAKDGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+++ VD L++NFHLP+STLLMLVSA E Y+ A+ YRF+S+GD +
Sbjct: 285 YQYKVVDALITNFHLPESTLLMLVSALSSRENIINAYELAVKEQYRFFSFGDAMFI 340
>gi|146329296|ref|YP_001208964.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase
[Dichelobacter nodosus VCS1703A]
gi|166216719|sp|A5EWY6|QUEA_DICNV RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|146232766|gb|ABQ13744.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase
[Dichelobacter nodosus VCS1703A]
Length = 354
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 137/352 (38%), Positives = 207/352 (58%), Gaps = 17/352 (4%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+F ++LP IA P+ R +RL+V + + IS+ + D FL D +V NNT
Sbjct: 9 DFFYELPEHLIARYPLQNRSDSRLLVAAVESAQKVHISNKQMIDFIDFLKPEDLLVINNT 68
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQS 124
+V+ A++ G + ++ + +S + R SK G + +Q
Sbjct: 69 RVVPARMFGHKISG-----GKVEVFIERLLSEQRVKAHIRASKAPLLGSQIVIGAQ---- 119
Query: 125 RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTY 184
+ T+ DK + I VFS + + ++ G +P+PPY+AR +A D YQT Y
Sbjct: 120 --KVTIEDKKDG--IYTVFS--EMPWTKLMAQQGKMPIPPYLARD--AEALDSERYQTVY 171
Query: 185 AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEI 244
A+I G+VAAPTAGLHF LL R+ + G+K +TLHVGAGTF PV+VE+ ++H+MH E
Sbjct: 172 AQIAGAVAAPTAGLHFDQKLLERIAAKGVKRAAITLHVGAGTFQPVRVENLNEHVMHQEW 231
Query: 245 GFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFR 304
+ A+ + +++ GR++++GTT+LR LE+A G + + G T++FITPGY F+
Sbjct: 232 FSLSQEVVDAVAACRAQNGRVIAIGTTALRALESAAIGSGKVGVFQGDTDLFITPGYEFQ 291
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
VD L +NFHLP+STLLMLVSAF G+ +++YQHAI+ YRF+SYGD L
Sbjct: 292 VVDALFTNFHLPESTLLMLVSAFAGVNNIRRIYQHAITEQYRFFSYGDAMFL 343
>gi|313888442|ref|ZP_07822109.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Peptoniphilus harei ACS-146-V-Sch2b]
gi|312845471|gb|EFR32865.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Peptoniphilus harei ACS-146-V-Sch2b]
Length = 339
Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 148/356 (41%), Positives = 205/356 (57%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M K+F +DLP IA P RD +RL+V+ + + H D+ +L D +V
Sbjct: 1 MKTKDFYYDLPKELIAQHPEEKRDHSRLLVL--DKESGEMEHKHFY-DIIDYLKKGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A++ G H +E++I L R + W ++P K K G + F
Sbjct: 58 LNDTKVMPARIYG----HREGKEEKIEFLLLNR-KDDIWECLSKPGKKAKIGSKIIF--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+L A V+D G L F GI E + +G +PLPPYI K D Y
Sbjct: 110 --SDKLSAEVVDISEDGSRFLKFEYDGI-FEEILDELGEMPLPPYITEK----LEDKNRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +GS AAPTAGLHFT LL +L G+++ ++TLHVG GTF PVKVE+ D+H M
Sbjct: 163 QTVYAREEGSAAAPTAGLHFTKELLEKLKDKGVEICYITLHVGLGTFRPVKVENVDEHEM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +N+ K RG R+++VGTTS+R +E+ EDG + SGFTNIFI P
Sbjct: 223 HSEFYVMTKEVADKINAAKDRGSRVIAVGTTSVRTVESIANEDGRVCEKSGFTNIFIYPP 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STLLMLVS+ E K Y+ A+ YRF+S+GD +
Sbjct: 283 YKFKCVDALITNFHLPESTLLMLVSSLSSREIILKAYEEAVKERYRFFSFGDAMFI 338
>gi|323343219|ref|ZP_08083450.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Erysipelothrix rhusiopathiae ATCC 19414]
gi|322463283|gb|EFY08478.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Erysipelothrix rhusiopathiae ATCC 19414]
Length = 343
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 148/359 (41%), Positives = 203/359 (56%), Gaps = 25/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDFDLP IA P R +RL+VV + + D ++ +LN D +V
Sbjct: 1 MNVNDFDFDLPEELIAQTPAEKRSESRLLVVDG-----MNLEDKRFYNIIDYLNEGDVLV 55
Query: 61 FNNTKVITAQLNGVR---FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
N+T+VI A+L G + H+ L ++ + +KV+K G L F
Sbjct: 56 LNDTRVIAARLFGEKPETGAHVE--------LLILKFEGKTAECLVGNAKVVKLGTELSF 107
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
DGQ + T + L+F GI LE + +G +PLPPYI + D
Sbjct: 108 --GDGQLKAICTHVGDEGLRNFDLIFD--GIFLE-ILDELGQMPLPPYIHER----LEDK 158
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT Y++++GS AAPTAGLHFT LL + + GI + VTLHVG GTF PVKV++ +
Sbjct: 159 ERYQTVYSRVEGSAAAPTAGLHFTPELLDAIQAKGITIAPVTLHVGLGTFRPVKVDNVLE 218
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MHSE + TA LN+ K G RI++VGTTS+R LET ++ G G + IFI
Sbjct: 219 HKMHSEAYTMTQDTADILNTAKREGRRIIAVGTTSVRTLETVMSKYGTFKECQGNSEIFI 278
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY ++AVD +++NFHLPKSTL+MLVSAF G EE Y+HA+ YRF+S+GD+ L
Sbjct: 279 YPGYEWKAVDAIITNFHLPKSTLIMLVSAFMGKEEIDHAYKHAVDSKYRFFSFGDSMFL 337
>gi|315127835|ref|YP_004069838.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pseudoalteromonas sp. SM9913]
gi|315016349|gb|ADT69687.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pseudoalteromonas sp. SM9913]
Length = 343
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 148/366 (40%), Positives = 215/366 (58%), Gaps = 30/366 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F FDLP IA P R S+RL+ +L+ P +H + SD+ +N ND +
Sbjct: 1 MRVADFSFDLPDELIARFPKADRTSSRLL----SLNGPTGEIEHKIFSDILELVNENDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNTKVI A++ G + ++ + + + + R SK K G++L
Sbjct: 57 VFNNTKVIPARMFGQK-----ESGGKVEVLVERVLDEHRVLAHIRASKSPKPGNVLIL-- 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISL---VGTIPLPPYIARKRPIDARD 176
+ + +A ++ + +T +F + E + + VG +PLPPYI RP + D
Sbjct: 110 ---EGKAKAIMVARHDT-----LFELEFDRSENVLDILNDVGHMPLPPYI--DRPDNEAD 159
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT Y + G+VAAPTAGLHF L++ L G+++ FVTLHVGAGTF PV+VE D
Sbjct: 160 RERYQTVYGEKPGAVAAPTAGLHFDDKLMAALKDKGVQMAFVTLHVGAGTFQPVRVESVD 219
Query: 237 DHIMHSEIGFIDAP--TAQALNSVKSRGGRIVSVGTTSLRLLETATT-EDGIINPWSGFT 293
+HIMHSE +I+ P A+ S K++GGR++++GTTS+R LE+A G ++ + G T
Sbjct: 220 EHIMHSE--YIEVPQDVVDAVASTKAKGGRVIAIGTTSVRSLESAAKIHGGKLDTYFGDT 277
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PGY+F VD +++NFHLP+STL+MLVSAF G + Y AI YRF+SYGD
Sbjct: 278 DIFIFPGYQFNVVDAMVTNFHLPESTLIMLVSAFAGQDNIMGAYNTAIEQQYRFFSYGDA 337
Query: 354 SLLFQK 359
L +K
Sbjct: 338 MFLTRK 343
>gi|226226034|ref|YP_002760140.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Gemmatimonas aurantiaca T-27]
gi|226089225|dbj|BAH37670.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Gemmatimonas aurantiaca T-27]
Length = 353
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 151/357 (42%), Positives = 209/357 (58%), Gaps = 22/357 (6%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
++D++LP RIA PV PRD++RL+VV ++ D+ + + + DA+V N T
Sbjct: 15 DYDYELPEERIAQLPVEPRDASRLLVVDRESGS---LTHRQFRDVVSLIPAGDAVVLNTT 71
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDIL----HFFSQ 120
KV A+L G R + EI H+R + + P ++ G + F +
Sbjct: 72 KVFRARLLGHRE---SGGPAEILLLRHLRDA--HYEAMIHPGGKLRPGRTVTIAPGFTVE 126
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ T I K + E FS ++ I G IPLPPYI R DA D Y
Sbjct: 127 IVDTTPRRTRIVKLHAPE----FS----SVQSAIEQHGHIPLPPYIERSD-TDA-DAARY 176
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA GSVAAPTAGLHFT +LL+ L + G++ V LHVGAGTF PV +D H+M
Sbjct: 177 QTIYAAQAGSVAAPTAGLHFTDDLLATLDARGVERVNVLLHVGAGTFRPVSDDDPSQHVM 236
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A LN+V++RGG+I +VGTTS+R +ETA T DG+I+P+ G TNIF+ P
Sbjct: 237 HEEWCEVTPDAAARLNAVRARGGKIWAVGTTSVRTIETAATPDGVIHPYIGETNIFLRPP 296
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+FR VD L++NFHLP+STL+MLV+AF G + T + Y+ A++ YRFYSYGD +L
Sbjct: 297 YQFRGVDHLITNFHLPRSTLIMLVAAFAGYDLTMQAYRTAVAEQYRFYSYGDAMVLL 353
>gi|167031890|ref|YP_001667121.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
putida GB-1]
gi|189038874|sp|B0KPG6|QUEA_PSEPG RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|166858378|gb|ABY96785.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Pseudomonas putida GB-1]
Length = 349
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 150/360 (41%), Positives = 208/360 (57%), Gaps = 28/360 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R +RL+V L P +S DL +L D +
Sbjct: 1 MRVADFSFELPDSLIARHPLAERHGSRLLV----LDGPTGALSHRQFPDLLDYLRPGDLM 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + ++ + + + + R SK K G ++
Sbjct: 57 VFNNTRVIPARLFGQKAS-----GGKLEVLVERVLDSHRVLAHVRASKAPKVGAVI-LID 110
Query: 120 QDGQSRLEA---TVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
G++ + A T+ + T E+L + L+R VG +PLPPYI RP + D
Sbjct: 111 GGGEAEMVARHDTLFELRFTEEVLPL-------LDR----VGHMPLPPYI--DRPDEGAD 157
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YA+ G+VAAPTAGLHF LL ++ + G++ FVTLHVGAGTF PV+V+ +
Sbjct: 158 RERYQTVYAQRAGAVAAPTAGLHFDEALLEKIAAKGVERAFVTLHVGAGTFQPVRVDKIE 217
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
DH MH E + A+ + ++RGGR+V+VGTTS+R LE+A DG++ +SG T+IF
Sbjct: 218 DHHMHKEWLEVGQDVVDAIEACRARGGRVVAVGTTSVRSLESA-ARDGVLKAFSGDTDIF 276
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PG F VD L++NFHLP+STLLMLVSAF G ET Y A+ H YRF+SYGD +
Sbjct: 277 IYPGRPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAVEHGYRFFSYGDAMFI 336
>gi|167627673|ref|YP_001678173.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
philomiragia subsp. philomiragia ATCC 25017]
gi|189038523|sp|B0TYS6|QUEA_FRAP2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|167597674|gb|ABZ87672.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
philomiragia subsp. philomiragia ATCC 25017]
Length = 338
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 136/357 (38%), Positives = 210/357 (58%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LP IA P+ RD++RL+ ++ I DH +D F+N D ++
Sbjct: 1 MRTDDFDYKLPEELIASYPLENRDASRLLKLNKQTGE---ILDHKFTDFIDFINPEDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV+ A+L G + ++ + +P + + + ++ G + Q
Sbjct: 58 FNNSKVMLARLYGEKITG-----AKLEYLIERVKTPKIFETHIKANRSPAIGS--EIYVQ 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D A +++K G + L+ ++ + + G IPLPPY+ KR + D Y
Sbjct: 111 DTL----AKILEK--DGGMYLLELQGNKDIYQLMEEFGHIPLPPYM--KRDDEEFDAERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GSVAAPTAGLHF+ L+ ++ + G + ++TLHVG+GTF PV+V+D ++H M
Sbjct: 163 QTVYAKDLGSVAAPTAGLHFSEELMQQIKAKGTDIAYITLHVGSGTFKPVQVDDVNNHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE+ + + + K+ GGR++++GTTS+R LETA + G I P+ G T+IF+ PG
Sbjct: 223 HSEVISVSEDVCEKIRQTKANGGRVIAIGTTSVRSLETA-GQSGEIQPYQGETDIFLYPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F VD +++NFHLPKSTL+MLVSAF E+ K Y+HAI+ YRF+SYGD +F
Sbjct: 282 KKFNIVDAMITNFHLPKSTLIMLVSAFADKEKIMKAYEHAIAEKYRFFSYGDAMFIF 338
>gi|42527952|ref|NP_973050.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Treponema
denticola ATCC 35405]
gi|81570134|sp|Q73JQ7|QUEA_TREDE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|41818997|gb|AAS12969.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Treponema
denticola ATCC 35405]
Length = 347
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 155/372 (41%), Positives = 207/372 (55%), Gaps = 40/372 (10%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+ KEF+FDLP IA P R RL+++ + D L ++LP L N +V
Sbjct: 1 MLTKEFNFDLPEELIAQSPSEKRGGDRLLILDKQSGK---LEDRLFTELPEILPKNALMV 57
Query: 61 FNNTKVITAQL------NGV-RFCHINRREKEISCTLHMRVSPNS-WSVYARPSKVIKKG 112
FNN+KV A++ N V F IN MR S S W V A+ +K K G
Sbjct: 58 FNNSKVRHARIYAKSKTNAVCEFLMIN----------PMRDSDGSLWQVMAKKAKRQKPG 107
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQIS-----LVGTIPLPPYIA 167
F +DG EA +I+ EI L ++ R I G +PLPPYI
Sbjct: 108 KT--FLFEDGT---EAEIIE----SEIPLESEFRCMKFNRVIDDEWLDKYGHMPLPPYIH 158
Query: 168 RKRPIDARDYVD-YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGT 226
RK D ++ D YQT YA+I GS+AAPTAGLHFT +LS++ GI + +VTLHVG GT
Sbjct: 159 RK---DTQEDADRYQTVYAEIYGSIAAPTAGLHFTQEVLSKIRDKGIDIEYVTLHVGLGT 215
Query: 227 FMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII 286
F+PV+ E +DH MH+E FI TAQA+ K G I++VGTT++R LE+A E
Sbjct: 216 FLPVRAEKIEDHKMHTEHFFISEKTAQAVEKAKKEGRPIIAVGTTTVRTLESAWDEKRKE 275
Query: 287 NPWSG-FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAY 345
W T+IFI P Y+F+ +D L +NFH P+S+L+MLVSA G E K Y+HA+ Y
Sbjct: 276 LKWGNQSTDIFIYPSYKFKLIDKLFTNFHTPESSLVMLVSALAGKENIFKAYRHAVEEKY 335
Query: 346 RFYSYGDTSLLF 357
+F+SYGD L+
Sbjct: 336 KFFSYGDAMLIL 347
>gi|317404681|gb|EFV85073.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Achromobacter xylosoxidans C54]
Length = 351
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 143/360 (39%), Positives = 206/360 (57%), Gaps = 29/360 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ V +FD++LPP IA P R +RL+ +L + D +DL L D +V
Sbjct: 4 LTVSDFDYELPPELIAQTPAAQRTGSRLL----HLDGASQLHDRQFADLEKLLRPGDLLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + ++ + + + R SK G +L
Sbjct: 60 FNDTRVIKARLAGHKIT-----GGKVEVLVERITDTDRALAHVRASKSPGAGMVLRL--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLV-FSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ATV+ + GE+ + F +EL + G PLPPYI DA D
Sbjct: 112 --ADAFDATVLGR--EGELFDIRFPGPVLEL---LDAHGATPLPPYITHA--ADAGDDDR 162
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ G+VAAPTAGLHF L RL ++G++ FVTLHVGAGTF PV+V++ DH+
Sbjct: 163 YQTVYAREPGAVAAPTAGLHFDQPTLDRLAALGVERAFVTLHVGAGTFQPVRVDNLADHV 222
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPW------SGF 292
MH+E + T A+ + ++RGGR+++VGTTS+R LE+A + +G P G
Sbjct: 223 MHAEWFTVPQATVDAIAATRARGGRVIAVGTTSVRALESAAAQTEGRTAPGLPLAAAQGD 282
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T +FITPGY++R +D L++NFHLP+STLLMLVSA G+E ++ Y HA++ YRF+SYGD
Sbjct: 283 TRLFITPGYQYRVIDALVTNFHLPQSTLLMLVSALAGVEPIRRAYAHAVAQRYRFFSYGD 342
>gi|297539464|ref|YP_003675233.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylotenera sp. 301]
gi|297258811|gb|ADI30656.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylotenera sp. 301]
Length = 350
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 147/361 (40%), Positives = 214/361 (59%), Gaps = 22/361 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F+F LP + IA P R ++R++ H N S ++D++ +LP L + D +V
Sbjct: 1 MRTEDFNFYLPDALIAQHPTAERTASRML--HLN-SSKGELADNMFINLPEHLQAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L GV+ + + ++ ++ R S+ K G L S
Sbjct: 58 FNDTRVIKARLFGVKHT-----GGSVEVMIERVINQHTAYAQIRASRAPKVGTRL-TLSN 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A D + E+L + S ++L Q G +PLPPYI D D Y
Sbjct: 112 AFDVEVTARHDDLF---ELLFLSETSVLDLLEQ---HGALPLPPYITHSATSD--DEERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT ++K G+VAAPTAGLHF +L L GI + +VTLHVGAGTF PV+V++ ++H M
Sbjct: 164 QTVFSKHLGAVAAPTAGLHFNDAMLDTLKQKGINIAYVTLHVGAGTFQPVRVDNINEHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TE---DGIINPWSGFTNI 295
HSE+ I T +N+ K+ G ++ ++GTT+LR LE+A TE +G + +G T+I
Sbjct: 224 HSELYSISQATIDMINATKTNGAKVTAIGTTALRALESAARVTEFNTNGNLQAGNGDTDI 283
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGY+F+ VD L +NFHLPKSTLLMLVSAF G++ KK Y+HAI+ YRF+SYGD L
Sbjct: 284 FITPGYQFKVVDRLFTNFHLPKSTLLMLVSAFAGMDNIKKAYEHAINEHYRFFSYGDAML 343
Query: 356 L 356
+
Sbjct: 344 I 344
>gi|160934267|ref|ZP_02081654.1| hypothetical protein CLOLEP_03138 [Clostridium leptum DSM 753]
gi|156866940|gb|EDO60312.1| hypothetical protein CLOLEP_03138 [Clostridium leptum DSM 753]
Length = 341
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 141/350 (40%), Positives = 194/350 (55%), Gaps = 17/350 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ PRD +RLMV+ I D+ FLN D ++
Sbjct: 1 MKTSDFYYDLPEELIAQTPIEPRDHSRLMVLDKKTGS---IGHRHFYDIIEFLNPGDCLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+++V+ A++ G++ ++ L N W V A P K K G F
Sbjct: 58 LNDSRVLPARIYGIK----EGTGSQVEFLLLTHKEENVWEVLAGPGKKAKPGARFIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE--LERQISLVGTIPLPPYIARKRPIDARDYV 178
G L+A V++ G ++ F E + +G +PLPPYI ++ R
Sbjct: 111 -GNGLLKAEVLEVVEGGNRVIRFEFDPKEGNFYNILDRIGQMPLPPYITKRLENKER--- 166
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y+K GS AAPTAGLHFT LL +L + GI++ FVTLHVG GTF PVKV+D +H
Sbjct: 167 -YQTVYSKELGSAAAPTAGLHFTPELLEKLKNKGIRLGFVTLHVGLGTFRPVKVDDVTEH 225
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE I A + K GGR++ VGTTS R +E+ T +G I G+TNIFI
Sbjct: 226 KMHSEHYEISQEVADLILETKKNGGRVIGVGTTSCRTVESVATFEGQIKASEGWTNIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
PGY F+ +D L++NFHLP+STL+MLVSAF G + T + Y+ A+ YRF+
Sbjct: 286 PGYEFKVLDGLITNFHLPESTLIMLVSAFAGYDHTMQAYKTAVQERYRFF 335
>gi|291544961|emb|CBL18070.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Ruminococcus sp. 18P13]
Length = 341
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 141/356 (39%), Positives = 197/356 (55%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ PR+ +RLMV+ +S +L L D +V
Sbjct: 1 MKKSDFYYDLPEELIAQTPIEPRNQSRLMVIDRETG---AVSHQHFYNLCDMLQEGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+++VI A+L G + + I L + W + RP K K G F
Sbjct: 58 LNDSRVIPARLYGEKIDNGTF----IEFLLLEQKGDKLWELICRPGKKAKVGTRFSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL V++ G L+ F+ G + VG +PLPPYI K +D Y
Sbjct: 111 -GGGRLIGEVVEVKEDGNRLVQFTCEG-NFFTALEDVGQMPLPPYIKAK----LQDKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ GS AAPTAGLHFT +L +L G+++ +VTLHVG GTF PVK +D H M
Sbjct: 165 QTVYSRELGSAAAPTAGLHFTKEMLQQLQDKGVRLAYVTLHVGLGTFRPVKEDDVLQHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA +N K+ GGR++ VGTTS R +E+ T G I G+T+IFI PG
Sbjct: 225 HSEHYAMSQETADLINQTKAAGGRVICVGTTSCRTVESIATFFGKIQACEGYTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSAF G + T + Y+ A+ YRF+S+GD +
Sbjct: 285 YQFKVMDGLITNFHLPESTLIMLVSAFLGYDNTMRAYKTAVEEKYRFFSFGDACFI 340
>gi|260890428|ref|ZP_05901691.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Leptotrichia hofstadii F0254]
gi|260860048|gb|EEX74548.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Leptotrichia hofstadii F0254]
Length = 340
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 141/357 (39%), Positives = 204/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF+LP IA V PRD ++L+V++ + ++ +L +D +V
Sbjct: 1 MKISDFDFELPEELIAQHAVNPRDHSKLLVLNKKEKT---LEHKKFYNIIDYLKKDDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKVI A+L G + + + C L R +W V +P+K +K G L F
Sbjct: 58 INRTKVIPARLFGHKENGVV-----LECFLLKRYDLYTWEVLLKPAKKLKIGQKLIFL-- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ LEA +++ G ++ F+ G E + +G +PLPPYI K D Y
Sbjct: 111 --EGVLEAELMEIKEDGNRIIKFNFEG-RFEEILDKLGEMPLPPYIVEK----LEDKNRY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK SVAAPTAGLHFT+ LL ++ G+ + V L VG GTF PV+VE+ DH M
Sbjct: 164 QTVYAKEGESVAAPTAGLHFTNELLGKIREKGVIITEVFLDVGLGTFRPVQVENVLDHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I T + +N K +G R+++VGTTS+R LE++ ++G + G TNIFI
Sbjct: 224 HSEKYRIPEETVKIINKAKEKGNRVIAVGTTSVRTLESSVDDNGKLIASEGDTNIFIYGD 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+ VD +++NFHLPKSTL+ML+SAF G E + Y+ AI YRFYS+GD+ ++
Sbjct: 284 YNFKIVDAIITNFHLPKSTLIMLISAFGGKEFIFEAYKKAIEEKYRFYSFGDSMFIY 340
>gi|15837915|ref|NP_298603.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xylella
fastidiosa 9a5c]
gi|21263924|sp|Q9PDR5|QUEA_XYLFA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|9106307|gb|AAF84123.1|AE003964_7 S-adenosylmethionine: tRNA ribosyltransferase-isomerase [Xylella
fastidiosa 9a5c]
Length = 347
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 146/355 (41%), Positives = 206/355 (58%), Gaps = 18/355 (5%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+F +DLP IA P+ R ++RLM+V S P D V DLP L D +VFN+T
Sbjct: 6 DFHYDLPEELIAQGPLPERSASRLMLVP---SAPEQFQDCYVRDLPELLQPGDLLVFNDT 62
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQS 124
+VI A+L G + + + + + V R S+ +K G+ + G +
Sbjct: 63 RVIPARLFGRKVSG-----GRVEILIERFLGTHQAVVQLRTSRSLKVGNRI-LLDAGGHA 116
Query: 125 RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTY 184
+ D + LL F + LE+ +S VG +PLPPYI R+ D D YQT +
Sbjct: 117 GVLGRDGDFY-----LLSFDVES-PLEQWLSDVGQLPLPPYIHRE--PDEYDRERYQTVF 168
Query: 185 AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEI 244
A+ G+VAAPTAGLHF +LL+RL + G++ ++TLHVGAGTF PV+V H+MHSE
Sbjct: 169 ARAVGAVAAPTAGLHFDESLLARLRARGVEFGYITLHVGAGTFQPVRVALLQQHVMHSEW 228
Query: 245 GFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFR 304
+ A + + S ++RGGR+++VGTT +R LE+A G + P+ G T IFI PGY R
Sbjct: 229 FKVGAELVEQVRSARARGGRVIAVGTTVVRSLESAMRH-GELQPFVGETQIFIFPGYCIR 287
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
+VD +++NFHLP+STLLMLV+AF G Y HA+ YRF+SYGD LLF +
Sbjct: 288 SVDAMVTNFHLPESTLLMLVAAFAGRTRILDAYYHAVQQRYRFFSYGDAMLLFPR 342
>gi|160896458|ref|YP_001562040.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Delftia
acidovorans SPH-1]
gi|160362042|gb|ABX33655.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Delftia
acidovorans SPH-1]
Length = 388
Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 150/370 (40%), Positives = 206/370 (55%), Gaps = 29/370 (7%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LP + IA P R ++RL+ + + P +D + +LP L D +VFN
Sbjct: 32 LSDFDFELPENLIAQHPAAQRSASRLLDGRDDATPP---TDRIFHELPDLLQPGDLLVFN 88
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVS----PNSWSVYARPSKVIKKGDILHFF 118
+T+V+ A++ G EK L + V N + R SK G +H
Sbjct: 89 DTRVLKARIFG---------EKASGGRLELLVERVLEGNDVVAHMRVSKKPLPGSRIHLC 139
Query: 119 SQDGQSRLEATVIDKW-NTGEILLVFSISGIELERQISLV---GTIPLPPYIARKR---- 170
+ +A + +W + L S G E L+ G +PLPPYI R +
Sbjct: 140 GGKNRGGFDAVLRGRWPDENGPLFHLSFEGPRGETPHELMERFGHLPLPPYIERHQDTGN 199
Query: 171 -PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
P A D YQT +A G+VAAPTA LHF +L+RL GI+ VTLHVGAGTF P
Sbjct: 200 DPDAAEDSERYQTVFAARPGAVAAPTAALHFDDAVLARLAERGIERASVTLHVGAGTFQP 259
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPW 289
VK E+ DH MHSE I T AL + RGGR+V+VGTT++R LE+ +
Sbjct: 260 VKTENLADHQMHSEWYEIPLATLAALERCRQRGGRVVAVGTTTVRTLESWAQ----TGQF 315
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
SG T IFITPG+ ++ VD+L++NFHLPKSTL+MLVSAF G E+ +Y+HAI+ YRF+S
Sbjct: 316 SGDTRIFITPGFEYQVVDLLITNFHLPKSTLMMLVSAFAGYEQVMALYRHAIAQEYRFFS 375
Query: 350 YGDTSLLFQK 359
YGD+ LL +K
Sbjct: 376 YGDSMLLKKK 385
>gi|15643340|ref|NP_228384.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Thermotoga
maritima MSB8]
gi|7674170|sp|Q9WZ44|QUEA_THEMA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|4981091|gb|AAD35659.1|AE001732_4 S-adenosylmethionine tRNA ribosyltransferase [Thermotoga maritima
MSB8]
Length = 335
Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 144/358 (40%), Positives = 199/358 (55%), Gaps = 24/358 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V EFD++LPP IA PV PRD++RLMV+H I + ++ +L D +V
Sbjct: 1 MKVSEFDYELPPELIAQEPVEPRDASRLMVLHRKTQR---IEHRIFREIIEYLEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N +KVI A+L + + I L R+ W RP + +KKG L +
Sbjct: 58 LNVSKVIPARLYARKKTGAS-----IEILLIERLEEGIWKCLVRPGQKVKKGTEL-VIDE 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D L A + + G +L F +R I G PLPPYI + P++ Y
Sbjct: 112 D----LSAVCLGRGEDGTRILKFQPQD---DRLIFEKGRTPLPPYIKNEVPLER-----Y 159
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GSVAAPTAGLHFT L+ +L G++ V LHVG GTF PVKVE+ + H M
Sbjct: 160 QTVYAKEEGSVAAPTAGLHFTPELIEKLKKKGVQFAEVVLHVGIGTFRPVKVEEVEKHKM 219
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H E + T + L + RG RIV+VGTT++R LET A + + G T++FI P
Sbjct: 220 HEEFYQVPKETVRKLRETRERGNRIVAVGTTTVRTLETIARLPEQ--EEYVGKTDLFIYP 277
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+ VD L++NFHLP+STLLMLV+AF G + + Y+ A+ YRF+S+GD L+
Sbjct: 278 PFEFKLVDALVTNFHLPRSTLLMLVAAFAGKDFVMEAYREAVKRRYRFFSFGDAMLIL 335
>gi|295398599|ref|ZP_06808631.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Aerococcus
viridans ATCC 11563]
gi|294973200|gb|EFG48995.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Aerococcus
viridans ATCC 11563]
Length = 374
Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 141/357 (39%), Positives = 201/357 (56%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +FDFDLP IA P+ R +++L+ + D D+ + L + D +V
Sbjct: 3 LTTNDFDFDLPEELIAQVPIQDRLASKLLKLDAQTGD---FQDGHFPDVASELEAGDVLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G+R I L + W +P++ I+ G + F
Sbjct: 60 LNNTRVLPARLQGIR----PDTGGHIEVLLLNNTEGDKWETLVKPARRIRVGTEIVF--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L A V + G ++ F +GI LE + +G +PLPPYI K +D D Y
Sbjct: 113 -GNGQLVAVVTEVLEHGGRIVEFKYNGIFLE-VLEALGEMPLPPYIKEK--LDNPDR--Y 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT ++ L G+++ ++TLHVG GTF PV V+D D H M
Sbjct: 167 QTVYAKENGSAAAPTAGLHFTEEFMADLKDRGVEIAYLTLHVGLGTFRPVSVDDIDAHKM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE +D A + + G ++++VGTTS+R LET T+ G + SG+T+IFI P
Sbjct: 227 HSEFYRLDQENAAKIRRAQEGGHKVIAVGTTSIRTLETIGTKFKGQVQADSGWTDIFIAP 286
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F V+ ++NFHLPKSTL+MLVSAF G + YQHA+ YRF+S+GD L
Sbjct: 287 GYQFSVVEGFITNFHLPKSTLIMLVSAFAGRDHVLAAYQHAVEEKYRFFSFGDAMFL 343
>gi|52696131|pdb|1VKY|A Chain A, Crystal Structure Of S-Adenosylmethionine Trna
Ribosyltransferase (Tm0574) From Thermotoga Maritima At
2.00 A Resolution
gi|52696132|pdb|1VKY|B Chain B, Crystal Structure Of S-Adenosylmethionine Trna
Ribosyltransferase (Tm0574) From Thermotoga Maritima At
2.00 A Resolution
Length = 347
Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 144/358 (40%), Positives = 199/358 (55%), Gaps = 24/358 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V EFD++LPP IA PV PRD++RLMV+H I + ++ +L D +V
Sbjct: 13 MKVSEFDYELPPELIAQEPVEPRDASRLMVLHRKTQR---IEHRIFREIIEYLEPGDLLV 69
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N +KVI A+L + + I L R+ W RP + +KKG L +
Sbjct: 70 LNVSKVIPARLYARKKTGAS-----IEILLIERLEEGIWKCLVRPGQKVKKGTEL-VIDE 123
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D L A + + G +L F +R I G PLPPYI + P++ Y
Sbjct: 124 D----LSAVCLGRGEDGTRILKFQPQD---DRLIFEKGRTPLPPYIKNEVPLER-----Y 171
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GSVAAPTAGLHFT L+ +L G++ V LHVG GTF PVKVE+ + H M
Sbjct: 172 QTVYAKEEGSVAAPTAGLHFTPELIEKLKKKGVQFAEVVLHVGIGTFRPVKVEEVEKHKM 231
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H E + T + L + RG RIV+VGTT++R LET A + + G T++FI P
Sbjct: 232 HEEFYQVPKETVRKLRETRERGNRIVAVGTTTVRTLETIARLPEQ--EEYVGKTDLFIYP 289
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+ VD L++NFHLP+STLLMLV+AF G + + Y+ A+ YRF+S+GD L+
Sbjct: 290 PFEFKLVDALVTNFHLPRSTLLMLVAAFAGKDFVMEAYREAVKRRYRFFSFGDAMLIL 347
>gi|34496443|ref|NP_900658.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Chromobacterium violaceum ATCC 12472]
gi|46576922|sp|Q7NZD4|QUEA_CHRVO RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|34330296|gb|AAQ58662.2| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Chromobacterium violaceum ATCC 12472]
Length = 340
Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 157/362 (43%), Positives = 219/362 (60%), Gaps = 26/362 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+ LP + IA P R ++RL+ V + +SD +DLP+ L + D +V
Sbjct: 1 MQLSDFDYHLPEALIAQHPPAERGASRLLHVDG-----MTLSDLSFADLPSRLQAGDLLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + ++ + + ++ + R SK K G L F
Sbjct: 56 FNDTRVIRARLFGEKAS-----GGKVEALIERVLDDHTALAHVRASKSPKPGSRLIF--- 107
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLV---GTIPLPPYIARKRPIDARDY 177
R EA ++++ ++ +F + + E ++ G +PLPPYI R D D
Sbjct: 108 --AGRWEAEMVERHDS-----MFKLRFLAEENVYDILEASGKLPLPPYIERSAEHD--DD 158
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YA+ QG+VAAPTAGLHFT +L+ L + GI FVTLHVGAGTF PVKV++ +
Sbjct: 159 ERYQTVYAREQGAVAAPTAGLHFTDAMLATLQAQGIATAFVTLHVGAGTFQPVKVDNVAE 218
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MHSEI I T A+ + ++RGGR+V+VGTTS+R LE+A G + G T+IFI
Sbjct: 219 HKMHSEIYDIPQATVDAIAAARARGGRVVAVGTTSVRALESAARH-GELKAGRGETDIFI 277
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFR VD L++NFHLPKSTLLMLVSAF G +E + Y+HA+ YRF+SYGD LL
Sbjct: 278 TPGYRFRVVDRLLTNFHLPKSTLLMLVSAFAGYDEIFQAYRHAVEKEYRFFSYGDAMLLE 337
Query: 358 QK 359
+K
Sbjct: 338 KK 339
>gi|262341077|ref|YP_003283932.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Blattabacterium sp. (Blattella germanica) str. Bge]
gi|262272414|gb|ACY40322.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Blattabacterium sp. (Blattella germanica) str. Bge]
Length = 347
Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 144/361 (39%), Positives = 206/361 (57%), Gaps = 18/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF P + +A P RD ++LMV+H + L DL + DA++
Sbjct: 1 MRTSDFDFGSPLNLLAKFPSQERDESKLMVIHRKNK---KVEHKLFKDLHQYFEEGDALI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN--SWSVYARPSKVIKKGDILHFF 118
NNTKV A+L F + + E +I L + P +W V P++ ++ G+ L+F
Sbjct: 58 LNNTKVFPARL----FGNKEKTEAKIEVFLLRELDPKDRTWDVLVDPARKVRVGNKLNF- 112
Query: 119 SQDGQSRLEATVIDKWNT-GEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
L VID + G IL L F+ + EL +I +G PLP YI R+ + D
Sbjct: 113 ----GYGLTGEVIDNTTSRGRILQLHFNGTHEELIIKIKELGKTPLPKYINRQP--EKND 166
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +GSVAAPTAGLHF+ +LL +L GI + +TLH+G G+F+PV+VED
Sbjct: 167 EERYQTVYAKKEGSVAAPTAGLHFSKHLLKKLEIKGINLVEITLHLGLGSFLPVEVEDIS 226
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE FI+ T + +N + RI +VGT+S+R +E++ + + +NP+SG+TN F
Sbjct: 227 KHKMDSEKCFINEKTCEVINHAIQKKKRICAVGTSSMRAIESSVSSNKNLNPFSGWTNKF 286
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH+PKSTLLM+ AF G + K YQ AI YRFYSYGD L+
Sbjct: 287 IFPPYNFSIANSMITNFHMPKSTLLMMTVAFAGFDLIMKAYQTAIQEKYRFYSYGDAMLI 346
Query: 357 F 357
Sbjct: 347 L 347
>gi|197303122|ref|ZP_03168167.1| hypothetical protein RUMLAC_01846 [Ruminococcus lactaris ATCC
29176]
gi|197297777|gb|EDY32332.1| hypothetical protein RUMLAC_01846 [Ruminococcus lactaris ATCC
29176]
Length = 342
Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 141/356 (39%), Positives = 196/356 (55%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R S+RL+V+ H+ ++ +LN D +V
Sbjct: 1 MKTSDFYYDLPEELIAQDPLEDRSSSRLLVLDKKTG---KTEHHVFREITDYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L GV+ +I L R + + W +P K + G + F
Sbjct: 58 LNDTKVIPARLIGVK----EETGAKIEVLLLKRGADDVWETLVKPGKKARPGARISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L V++ G L+ F GI E + +G +PLPPYI + +D Y
Sbjct: 111 -GDGLLVGEVMEVVEEGNRLIHFEYDGI-FEEILDQLGQMPLPPYITHQ----LQDKDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
T YA GS AAPTAGLHFT LL + G+ + VTLHVG GTF PVKV+D ++H M
Sbjct: 165 NTVYAAHSGSAAAPTAGLHFTPELLKEIEEKGVDIARVTLHVGLGTFRPVKVDDVENHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ID A +N K G +++ VGTTS R +E+A E+G + SG+T IFI PG
Sbjct: 225 HSEFYMIDEEAADKINRAKENGHKVICVGTTSCRTIESAADENGKLKACSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YQFKVLDELITNFHLPESTLVMLVSALAGREHVLAAYEEAVKERYRFFSFGDAMFI 340
>gi|319941721|ref|ZP_08016043.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Sutterella
wadsworthensis 3_1_45B]
gi|319804654|gb|EFW01521.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Sutterella
wadsworthensis 3_1_45B]
Length = 349
Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 146/359 (40%), Positives = 205/359 (57%), Gaps = 18/359 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LPP IA P+ R ++RL+ + VI D D+ FL D ++ N
Sbjct: 6 LSDFDFELPPELIAQYPLADRAASRLLHITEE-----VIEDCTFRDIEKFLRPGDLLIAN 60
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NT+VI A+L G + + + + R SK K G L FF+ G
Sbjct: 61 NTRVIKARLLGAKATG-----GAVEALIERVTGEFTAIAMVRASKSPKPGSKL-FFAASG 114
Query: 123 QSRLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ L+A V GE L F+ +++ + G +PLPPYI + + D YQ
Sbjct: 115 -TDLKAEVEVTGRAGEFFELKFAEPVLQV---LEAFGRVPLPPYI--EHAPEKADESRYQ 168
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YA+ G+VAAPTAGLHFT +LL+RL + G+ + +VTLHVGAGTF PV+VE+ +H MH
Sbjct: 169 TVYARHPGAVAAPTAGLHFTDDLLNRLKAKGVDIEYVTLHVGAGTFQPVRVENLSEHHMH 228
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
SE + A +N K++G R+++VGTTSLR LE+A G + + T +FI PGY
Sbjct: 229 SEWFSMPEDVAARINEAKAQGRRVIAVGTTSLRTLESAADRIGHVEAGARDTRLFIMPGY 288
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
+FR VD L++NFHLPKSTL+MLVSA G E + Y HA+ YRF+SYGD + + R
Sbjct: 289 KFRIVDALVTNFHLPKSTLVMLVSALVGRERILEAYAHAVREHYRFFSYGDACFIEKAR 347
>gi|187931500|ref|YP_001891484.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. mediasiatica FSC147]
gi|226713839|sp|B2SG47|QUEA_FRATM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|187712409|gb|ACD30706.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase
[Francisella tularensis subsp. mediasiatica FSC147]
Length = 338
Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 136/357 (38%), Positives = 210/357 (58%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LP IA P+ RD++RL+ ++ I+D+ +D F+N D +V
Sbjct: 1 MKTDDFDYKLPEELIASYPLENRDASRLLKLNKQTGE---IADYKFTDFIDFINPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV+ A+L G + ++ + +P + + + ++ G ++ S
Sbjct: 58 FNNSKVMLARLYGSKTTG-----AKLEYLIERIKNPKLFETHIKANRSPAIGSEIYVES- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
A V+DK G + L+ ++ + + G IPLPPY+ KR + D Y
Sbjct: 112 -----THAKVLDK--DGGMYLLEIQGDKDIYQLMEEFGHIPLPPYM--KRDDEEFDAERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GSVAAPTAGLHF+ L+ ++ G+ + ++TLHVG+GTF PV+V+D + H M
Sbjct: 163 QTVYAQDLGSVAAPTAGLHFSKELMQQIKDKGVDIAYITLHVGSGTFKPVQVDDVESHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E+ + Q + K GGR++++GTTS+R LETA ++G I P+ G T+IF+ PG
Sbjct: 223 HAEVISVPVEVCQKIRQTKENGGRVIAIGTTSVRSLETA-GQNGQIEPYQGETDIFLYPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F VD +++NFHLPKSTL+MLVSAF E+ K Y+HAI+ YRF+SYGD +F
Sbjct: 282 KKFNVVDAMITNFHLPKSTLIMLVSAFADKEKIIKAYEHAIAERYRFFSYGDAMFIF 338
>gi|255022138|ref|ZP_05294141.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acidithiobacillus caldus ATCC 51756]
gi|254968402|gb|EET25961.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acidithiobacillus caldus ATCC 51756]
Length = 346
Score = 246 bits (627), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 143/365 (39%), Positives = 209/365 (57%), Gaps = 34/365 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F + LPP RIA P+ R ++RL+V+ P + D V +LP FL + D +V
Sbjct: 1 MKKSDFYYHLPPERIAQEPLPERSASRLLVLDPRTGH---LCDSSVRELPQFLRAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIK--------KG 112
FN+T+V+ A+L+ + + L ++P+ AR SK +K G
Sbjct: 58 FNDTRVLPARLHARKPTG-----GAVELLLERLLAPDRARFLARSSKTLKPGARITLAGG 112
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
+ + +++G+ +E + N +IL E Q G +PLPPYI R
Sbjct: 113 EAVELLAREGRM-VELGLPGGGNWLDIL----------EAQ----GEVPLPPYI--DRAP 155
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
A D YQT YA+ G+VAAPTAGLHF ++LL+RL + G++ +TLHVGAGTF+PV+
Sbjct: 156 AAADRERYQTVYARNPGAVAAPTAGLHFDADLLARLDAAGMERAHITLHVGAGTFLPVEA 215
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
E+ ++H MHSE + A T + + ++RGGRI ++GTT+ R LE A G + ++G
Sbjct: 216 EEVEEHRMHSERVTVPAATVEQVRRAQARGGRIFAIGTTACRALEGA-ARSGSLQAFAGE 274
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IF+ PG FR +D L +NFHLP+STLLMLVSA G E Y HA++ YRF+SYGD
Sbjct: 275 TDIFLYPGRPFRVIDGLFTNFHLPESTLLMLVSALAGRERILAAYAHAVAQQYRFFSYGD 334
Query: 353 TSLLF 357
L+
Sbjct: 335 AMLIL 339
>gi|327541677|gb|EGF28201.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodopirellula baltica WH47]
Length = 402
Score = 246 bits (627), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 147/369 (39%), Positives = 204/369 (55%), Gaps = 25/369 (6%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
+D++LP IA P+ R ARLMV+ I H V DLP L + D +V NN++
Sbjct: 40 YDYELPRELIAQEPLQNRVDARLMVID---RASGEIEHHHVRDLPQLLRAEDVMVKNNSR 96
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSR 125
V+ A+L G R R + L + W + + ++ G+ + +D ++
Sbjct: 97 VVPARLFGRRTKTGGRWQ---GLFLRSDRATGVWELLTKTRGTLQTGETITLDDRDARAD 153
Query: 126 LEATVIDKWNTGEILLV----FSISG----IELERQISLVGTIPLPPYIARKRPIDARDY 177
E VI + + G +L+ S G IE + + G +P+PPYI +DA D
Sbjct: 154 GELMVIGRDDQGHLLVQPVPNESFEGPPQAIEPGKWLDKYGRVPIPPYIRDGHMVDA-DV 212
Query: 178 VDYQTTYAKIQ----GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
+YQT +A GSVAAPTAGLHFT LL + VTLHVG GTF P++V+
Sbjct: 213 TNYQTVFASTNPEDAGSVAAPTAGLHFTKQLLDEIAKGQTASAEVTLHVGIGTFRPIEVD 272
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA------TTEDGIIN 287
D D H MH E G I+ + +N +S GGR V+VGTTS+R+LE+ T G+
Sbjct: 273 DIDQHQMHEEWGRIEEDAVETINDRRSGGGRCVAVGTTSVRVLESCVANRNETNGRGVAA 332
Query: 288 PWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
W+G T+IFI P YRF VD LM+NFHLPKS+LL+LVSAF G E ++ YQ AI++ YRF
Sbjct: 333 TWTGATDIFIKPPYRFGVVDALMTNFHLPKSSLLVLVSAFAGHELIRRAYQEAIANEYRF 392
Query: 348 YSYGDTSLL 356
+SYGD L+
Sbjct: 393 FSYGDAMLI 401
>gi|120434719|ref|YP_860406.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Gramella
forsetii KT0803]
gi|117576869|emb|CAL65338.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Gramella
forsetii KT0803]
Length = 351
Score = 246 bits (627), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 146/360 (40%), Positives = 201/360 (55%), Gaps = 16/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F+F+LP +A P RD A+LMV++ I DL + D +V
Sbjct: 3 MKLSNFNFELPQELLAEYPSENRDEAKLMVLNRKEQT---IEHKKFKDLIDYFEPEDVMV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + I L ++P + W V P++ I+ G+ L+F
Sbjct: 60 LNNTKVFPARLYGNK----EKTGARIEVFLLRELNPETKLWDVLVDPARKIRIGNKLYFG 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISL--VGTIPLPPYIARKRPIDARD 176
+ L A VID + L F G + +I L +G PLP YI KR ++ D
Sbjct: 116 EDES---LVAEVIDNTTSRGRTLRFLYDGSYSDFRIKLKELGQTPLPKYI--KRDVEPSD 170
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ +LL RL GI VTLHVG GTF PV+VED
Sbjct: 171 EDRYQTIYAKNEGAVAAPTAGLHFSKHLLKRLEIKGIDFAEVTLHVGLGTFSPVEVEDLS 230
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE FI + +N+ K+ R+ +VGTT +R+LE+A + D +N + G+TN F
Sbjct: 231 KHKMDSEEAFITKDATEVINNAKTEKRRVCAVGTTVMRVLESAVSSDQTLNEFGGWTNKF 290
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH PKSTLLM+VSAF G + KK Y+ A+ YRFY+YGD L+
Sbjct: 291 IFPPYDFNIANCMITNFHTPKSTLLMMVSAFAGHDFMKKAYEEAVKEKYRFYTYGDAMLI 350
>gi|94971507|ref|YP_593555.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Koribacter versatilis Ellin345]
gi|94553557|gb|ABF43481.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Candidatus
Koribacter versatilis Ellin345]
Length = 366
Score = 246 bits (627), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 146/367 (39%), Positives = 207/367 (56%), Gaps = 23/367 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
++V +FD+ LPP IA P+ R + R+M V P + + S P L+ +D +V
Sbjct: 3 VLVSDFDYLLPPELIAQHPLADRSATRMMHVR-RYGGPEIDNLQFRS-FPDLLSPDDLVV 60
Query: 61 FNNTKVITAQLNGVRFCHINR---------RE-----KEISCTLHMRVSPNSWSVYARPS 106
FNNT+V+ A+L G R + RE E+ T ++ P W RP
Sbjct: 61 FNNTRVLPARLFGRRSGSRAQTLSPQNPASREFLTGRVEVLLTRQIQADPPVWQALVRPG 120
Query: 107 KVIKKGDILHFFSQDGQ-SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPY 165
+ + G+ + FF +D + L A ++++ GE L F+ + ++ +G IPLPPY
Sbjct: 121 RKLGVGEKI-FFGEDAEHPELTAEILERGEFGERTLRFTG---DFWGTVNRIGHIPLPPY 176
Query: 166 IARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAG 225
I RP A D YQT +A+ GSVAAPTAGLHFT +L R+ + GI+ +TLHVG G
Sbjct: 177 I--DRPDTAEDREQYQTIFARELGSVAAPTAGLHFTREILDRIAARGIETAELTLHVGLG 234
Query: 226 TFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI 285
TF P++ E+ +++ +H E I A A+ LN + G RIV+VGTT +R LE A +
Sbjct: 235 TFQPLRHENVEENHLHLERYSISADAAEKLNRARREGRRIVAVGTTIVRTLEFAAQQSKE 294
Query: 286 INPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAY 345
SG NIFI PGY FR V +++NFHLPKS+LLMLVSAF G + Y HA++ Y
Sbjct: 295 FGEQSGDANIFIYPGYEFRVVGGMLTNFHLPKSSLLMLVSAFAGTSRALRAYNHAVAERY 354
Query: 346 RFYSYGD 352
RF+SYGD
Sbjct: 355 RFFSYGD 361
>gi|90962099|ref|YP_536015.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus salivarius UCC118]
gi|227891121|ref|ZP_04008926.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus salivarius ATCC 11741]
gi|301301357|ref|ZP_07207499.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus salivarius ACS-116-V-Col5a]
gi|90821293|gb|ABD99932.1| S-adenosylmethionine tRNA ribosyltransferase-isomerase
[Lactobacillus salivarius UCC118]
gi|227866995|gb|EEJ74416.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus salivarius ATCC 11741]
gi|300851017|gb|EFK78759.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus salivarius ACS-116-V-Col5a]
Length = 347
Score = 245 bits (626), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 139/353 (39%), Positives = 203/353 (57%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++FD+DLP S IA P+ RD +R++++ S D ++ LN DA+V
Sbjct: 6 LTTEDFDYDLPESLIAQTPLEERDQSRMLILD---SKTGEYQDDYFYNVIDQLNPGDALV 62
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+++V+ A++ GV+ + L + W +P++ K G + F
Sbjct: 63 MNDSRVMPARIYGVK----PETGGHVEVLLLNNTHGDEWETLVKPARRAKVGTKISF--- 115
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+ATV + G L+ F GI +E + +G +PLPPYI K + Y
Sbjct: 116 -GDGALKATVTKELEHGGRLIEFEYDGIFME-ILDKLGEMPLPPYIKEK----LENPEMY 169
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ GS AAPTAGLHFT LL ++ G+K+ ++TLHVG GTF PV ++ +DH M
Sbjct: 170 QTVYSREVGSAAAPTAGLHFTKELLHKIEEKGVKLVYLTLHVGLGTFRPVSEKNIEDHKM 229
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A LN V+ GGRIV+ GTTS+R LET T+ +G I SG+T+IFI P
Sbjct: 230 HSEFYRLTEEAAATLNEVRKNGGRIVATGTTSIRTLETIGTKYNGEIKADSGWTDIFIKP 289
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY ++ V ++NFHLPKSTL+MLV++F G E Y+HA+ YRF+S+GD
Sbjct: 290 GYEWKVVQAFITNFHLPKSTLVMLVASFTGRENILNAYKHAVEEKYRFFSFGD 342
>gi|213971539|ref|ZP_03399650.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. tomato T1]
gi|301386144|ref|ZP_07234562.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. tomato Max13]
gi|302060706|ref|ZP_07252247.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. tomato K40]
gi|302135099|ref|ZP_07261089.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. tomato NCPPB 1108]
gi|213923731|gb|EEB57315.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. tomato T1]
Length = 354
Score = 245 bits (626), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 153/354 (43%), Positives = 205/354 (57%), Gaps = 22/354 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R S+RL+ L P ++ +DL L S D +
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLL----TLDGPTGALAHRQFTDLLEHLRSGDLM 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 57 VFNNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRASKSPKPGSSILI-- 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
DG EA ++ + + L F+ + L + VG +PLPPYI RP + D
Sbjct: 110 -DGGG--EAEMVARHDA-LFELRFAEEVLPL---LDRVGHMPLPPYI--DRPDEGADRER 160
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ G+VAAPTAGLHF LL + + GI+ FVTLHVGAGTF PV+VE +DH
Sbjct: 161 YQTVYAQRAGAVAAPTAGLHFDQPLLEAIAAKGIETAFVTLHVGAGTFQPVRVEQIEDHH 220
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE + A+ + ++RGGR+++VGTTS+R LE+A DG + P+SG T+IFI P
Sbjct: 221 MHSEWLEVSQDVVDAVAACRARGGRVIAVGTTSVRSLESA-ARDGQLKPFSGDTDIFIYP 279
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
G F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+SYGD
Sbjct: 280 GRPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFSYGDA 333
>gi|257455334|ref|ZP_05620569.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enhydrobacter aerosaccus SK60]
gi|257447296|gb|EEV22304.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enhydrobacter aerosaccus SK60]
Length = 357
Score = 245 bits (626), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 157/372 (42%), Positives = 211/372 (56%), Gaps = 37/372 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FD+ LP IA P+ R ++RL+ + P P D DLP LNS D +V
Sbjct: 3 LTLDDFDYQLPDELIARYPLAVRSASRLLYL-PAHGQP---KDQQFVDLPELLNSGDLVV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWS--------VYARPSKVIKKG 112
FN+TKV+ A+L G + L R+ P++ + + R S+ K+G
Sbjct: 59 FNDTKVMKARLFG------QKASGGAVEVLVERILPDNATSNQKHTALCHVRASRSPKEG 112
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
L DG + ATV+ + + LL F + + + G +P+PPY R
Sbjct: 113 QTLSL--ADGN--IHATVMGREDN-LFLLEFDQPILPV---LEHYGELPIPPYFERH--A 162
Query: 173 DARDYVDYQTTY---AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
D D YQT + AK+ SVAAPTA LHF N+L+ L S GI FVTLHVGAGTF P
Sbjct: 163 DDNDETRYQTVFHDPAKL-ASVAAPTASLHFDDNVLAALKSKGINTAFVTLHVGAGTFAP 221
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE-----TATTEDG 284
VK ED H MHSE + TA +N K+RGG++++VGTT R+LE TA+ E+
Sbjct: 222 VKTEDILRHKMHSEYAELPQATADLINQTKARGGQVIAVGTTVTRVLETAFQKTASFENP 281
Query: 285 IINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHA 344
+++ WSG T+IFI P +RF +D L++NFHLPKSTLLMLVSAF G E K+ YQHAI
Sbjct: 282 MLSAWSGDTDIFIYPSFRFGVIDKLITNFHLPKSTLLMLVSAFAGSEPIKQAYQHAIEQQ 341
Query: 345 YRFYSYGDTSLL 356
YRF+SYGD LL
Sbjct: 342 YRFFSYGDAMLL 353
>gi|37678929|ref|NP_933538.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
vulnificus YJ016]
gi|320157295|ref|YP_004189674.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
vulnificus MO6-24/O]
gi|46576906|sp|Q7MNH2|QUEA_VIBVY RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|37197671|dbj|BAC93509.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase [Vibrio
vulnificus YJ016]
gi|319932607|gb|ADV87471.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
vulnificus MO6-24/O]
Length = 350
Score = 245 bits (626), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 145/365 (39%), Positives = 215/365 (58%), Gaps = 23/365 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ ++ N + D D+ + + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQSERTASRLLQLNGNTGA---VKDGSFKDVLELVQAGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREK--EISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
FNNT+VI A++ G R+E ++ + + + + R SK K G ++ F
Sbjct: 58 FNNTRVIPARMFG-------RKESGGKLEVLVERMLDEKRFLAHVRSSKSPKPGTLV-FL 109
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
++ Q E V + E+ L + +E+ +I G +PLPPYI RP + D
Sbjct: 110 GEEDQYSAE-MVARQDALFELHLKADKTILEVLEEI---GHMPLPPYI--DRPDEDADKE 163
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y + G+VAAPTAGLHF + LL ++ + G + +VTLHVGAGTF PVKV++ +H
Sbjct: 164 RYQTVYNQKPGAVAAPTAGLHFDNQLLEQIKAKGAEFAYVTLHVGAGTFQPVKVDNILEH 223
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE---DGI-INPWSGFTN 294
MHSE + A+ + K+RGGR+++VGTTS+R LE+A E +G + P+ G T
Sbjct: 224 HMHSEYAEVPQEVVDAIKATKARGGRVIAVGTTSVRSLESAAQESLKNGTELMPFFGDTE 283
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PGY+++ VD L++NFHLP+STL+MLVSAF G + T YQHA+++ YRF+SYGD
Sbjct: 284 IFIFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYDHTMNAYQHAVANQYRFFSYGDAM 343
Query: 355 LLFQK 359
+ +K
Sbjct: 344 FIEKK 348
>gi|261749412|ref|YP_003257098.1| queuosine biosynthesis protein [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
gi|261497505|gb|ACX83955.1| queuosine biosynthesis protein [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
Length = 347
Score = 245 bits (626), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 145/361 (40%), Positives = 206/361 (57%), Gaps = 18/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP +A +P RD +RLM+++ + I + DL + D I+
Sbjct: 1 MRTSDFDFGLPLDLLANQPTEERDESRLMIINRKSNG---IKHEIFKDLHQYFEEGDTII 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FNNTKV A+L F + + E +I L + P +W V P++ ++ G+ L+F
Sbjct: 58 FNNTKVFPARL----FGNKEKTEAKIEVFLLRELDPIDRTWDVLVDPARKVRVGNKLNF- 112
Query: 119 SQDGQSRLEATVIDKWNT-GEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
L VID + G IL L FS + EL ++I +G PLP YI KR D D
Sbjct: 113 ----GYGLTGEVIDNTTSRGRILQLHFSGTHKELIKKIKELGKTPLPKYI--KRLPDKND 166
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +GSVAAPTAGLHF+ +LL +L GI + +TLH+G G+F+PV+VED
Sbjct: 167 EERYQTIYAKEEGSVAAPTAGLHFSKHLLKKLEIKGINLVEITLHLGLGSFLPVEVEDIS 226
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE FI T +N + RI +VGT+S+R +E++ + + +NP+ G+TN F
Sbjct: 227 KHKMDSEKCFIKKETCDIVNKSIQQKKRICAVGTSSMRAIESSVSPNKYLNPFYGWTNKF 286
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH+PKSTLLM+ AF G + K Y+ A YRFYSYGD+ L+
Sbjct: 287 IFPPYNFSIANSMITNFHMPKSTLLMMTVAFTGYDLLMKAYKIATKEKYRFYSYGDSMLI 346
Query: 357 F 357
Sbjct: 347 L 347
>gi|208779883|ref|ZP_03247227.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
novicida FTG]
gi|208744338|gb|EDZ90638.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
novicida FTG]
Length = 338
Score = 245 bits (626), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 136/357 (38%), Positives = 212/357 (59%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LP IA P+ RD++RL+ ++ I+D+ +D F+N D +V
Sbjct: 1 MKTDDFDYKLPEELIASYPLENRDASRLLKLNKQTGE---IADYKFTDFIDFINPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV+ A+L G + ++ + +P + + + ++ G ++
Sbjct: 58 FNNSKVMLARLYGSKTTG-----AKLEYLIERIKTPKLFETHIKANRSPAIGSEIYV--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ L A V+DK G + L+ ++ R + G IPLPPY+ KR + D Y
Sbjct: 110 --EDTL-AKVLDK--DGGMYLLEIQGDKDIYRLMEEFGHIPLPPYM--KRDDEEFDAERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GSVAAPTAGLHF+ L+ ++ G+ + ++TLHVG+GTF PV+V+D + H M
Sbjct: 163 QTVYAQDLGSVAAPTAGLHFSKELMQQIKDKGVDIAYITLHVGSGTFKPVQVDDVESHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E+ + Q + K+ GGR++++GTTS+R LETA ++G I P+ G T+IF+ PG
Sbjct: 223 HAEVISVPVEVCQKIRQTKANGGRVIAIGTTSVRSLETA-GQNGQIEPYQGETDIFLYPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F VD +++NFHLPKSTL+MLVSAF E+ K Y+HAI+ YRF+SYGD ++
Sbjct: 282 KKFNVVDAMITNFHLPKSTLIMLVSAFADKEKIIKAYEHAIAERYRFFSYGDAMFIY 338
>gi|253700404|ref|YP_003021593.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Geobacter
sp. M21]
gi|251775254|gb|ACT17835.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Geobacter
sp. M21]
Length = 341
Score = 245 bits (626), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 143/353 (40%), Positives = 204/353 (57%), Gaps = 16/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD++LPP IA P RD++RL+ + + + + V+ + A D +V
Sbjct: 1 MFLSDFDYELPPELIAQHPASRRDASRLLTLDRSNGA---VGEATVASIAAQFLPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+LNG + + EI + P WS + SK K G +
Sbjct: 58 LNDTRVIPARLNGHK---ESGGAVEIFLVRRVPGDPECWSCLIKASKSPKNGCRVLL--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ATV+++ + G+ ++F S + + G++PLPPYI KR + D Y
Sbjct: 112 --PGGVTATVLER-DGGDWRVLFEGSD-DFMGWLEATGSMPLPPYI--KRNPEGEDLERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +G+VAAPTAGLHFT +L + G+++ VTLHVG GTFMP++VED +H M
Sbjct: 166 QTVFAREKGAVAAPTAGLHFTPEILDEIRGRGVEIVSVTLHVGLGTFMPIRVEDLSEHTM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E+ I TA A+ K RGGR+V++GTTSLR LE A G + +IFI PG
Sbjct: 226 HRELYRIPRETAAAIRRTKERGGRVVALGTTSLRALEHAAA-SGEVAAGEREADIFILPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
YRFR VD L++NFHLPKSTL MLV AF G E + Y+ A+S +RF+SYGD
Sbjct: 285 YRFRVVDALITNFHLPKSTLFMLVCAFAGKEAVLEAYREAVSRRFRFFSYGDA 337
>gi|313884160|ref|ZP_07817926.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Eremococcus
coleocola ACS-139-V-Col8]
gi|312620607|gb|EFR32030.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Eremococcus
coleocola ACS-139-V-Col8]
Length = 344
Score = 245 bits (626), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 147/360 (40%), Positives = 215/360 (59%), Gaps = 21/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISD--HLVSDLPAFLNSNDA 58
+ K+FD++LP IA P+ R S+RL+V+ + + L+ +D H++ +L + D
Sbjct: 3 LSTKDFDYELPEELIAQTPLKDRSSSRLLVIDRH-TDQLMDTDFKHILD----YLQAGDG 57
Query: 59 IVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
+V N T+VI A++ G + E LH R N W +P++ K G + F
Sbjct: 58 LVVNETRVIPARIIGTKPETGGHLE---VLLLHNR-EGNEWETLVKPARRAKVGTKISF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
GQ +L A V ++ + G ++ F G+ LE + +G +PLPPYI K D
Sbjct: 113 ---GQGQLTAIVKEELDHGGRIIEFDYQGVFLEI-LEELGQMPLPPYIKEK----LNDPD 164
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YAK GS AAPTAGLHFT LL + GI++ + LHVG GTF PV V++ +DH
Sbjct: 165 RYQTVYAKENGSAAAPTAGLHFTPELLEAAKAKGIEIIPLVLHVGLGTFRPVSVDNIEDH 224
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFI 297
MH+E + +AQA+N +K+ GG+I +VGTTS+R LET + + +G + SG+T+IFI
Sbjct: 225 DMHAEFYQLSDQSAQAINRIKAAGGKITAVGTTSVRTLETISHKFEGKLVADSGWTSIFI 284
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPG+ ++ VD L++NFHLP+STL+MLVSAF E+ Y HA+ YRF+S+GD LL
Sbjct: 285 TPGFDYQVVDHLITNFHLPQSTLVMLVSAFYDREKILAAYDHAVKEKYRFFSFGDAMLLL 344
>gi|310658617|ref|YP_003936338.1| s-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
sticklandii DSM 519]
gi|308825395|emb|CBH21433.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
sticklandii]
Length = 341
Score = 245 bits (626), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 145/357 (40%), Positives = 192/357 (53%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F FDLP IA P+ RD +RLM + N + D+ LN ND +V
Sbjct: 1 MKTNDFYFDLPEDLIAQVPLKNRDESRLMTLDKNTG---EVKHKTFRDILECLNDNDILV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G + EI L R N+W +P+K +K G + F
Sbjct: 58 LNNTRVIPARLFGFK----AETNAEIEILLLSRKDINTWEALTKPAKRLKLGTKIIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L V + G + F GI E + +G +PLPPYI K D Y
Sbjct: 111 -GDGLLIGIVKELQEDGIRTIEFEYEGI-FEDVLDRLGNMPLPPYIHEK----LEDKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K+ GS AAPTAGLHFT +L L + G+++ +VTLHVG GTF PVK E DH M
Sbjct: 165 QTVYSKVTGSSAAPTAGLHFTPEILLELKNKGVQIEYVTLHVGLGTFRPVKAESIFDHTM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I LN K G RIV VGTTS+R LE++ ++ SG+T+IFI P
Sbjct: 225 HKEYFEIAEDVKNRLNEAKKNGKRIVCVGTTSVRTLESSANILNNLDRNSGWTDIFIYPS 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+ VD +++NFHLP+STL+M++SAF G Y+ AI YRF+S+GD +F
Sbjct: 285 YEFKFVDAMITNFHLPESTLIMMISAFAGKTYIMDAYEEAIREKYRFFSFGDAMYIF 341
>gi|260063740|ref|YP_003196820.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Robiginitalea biformata HTCC2501]
gi|88783185|gb|EAR14358.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Robiginitalea biformata HTCC2501]
Length = 349
Score = 245 bits (626), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 146/364 (40%), Positives = 199/364 (54%), Gaps = 22/364 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F+F+LP +A P RD ++LMVVH I L DL + +D +V
Sbjct: 1 MKLSHFNFELPKELLAEYPTENRDESKLMVVHRETGK---IEHKLFKDLIDYFEEDDVVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREK-----EISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
NNTKV A+L G +EK E+ + W V P++ I+ G+ L
Sbjct: 58 LNNTKVFPARLYG-------NKEKTGARIEVFLLRELNEEQRLWDVLVDPARKIRIGNKL 110
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPID 173
+F + L A VID + L F G + R++ +G PLP YI KR +
Sbjct: 111 YFGEDEA---LVAEVIDNTTSRGRTLRFLYDGSYTDFRRKMRELGQTPLPKYI--KRDPE 165
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT YAK +G+VAAPTAGLHF+ +LL RL GI +TLHVG GTF PV+VE
Sbjct: 166 PEDESRYQTIYAKYEGAVAAPTAGLHFSKHLLKRLEIKGINFAELTLHVGLGTFSPVEVE 225
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
D H M SE ID + +N+ K ++ +VGTT +R LE+A + + ++N G+T
Sbjct: 226 DLSKHKMDSEELVIDERATEIVNTAKKNKRKVCAVGTTVMRGLESAVSSEHMLNTHEGWT 285
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
N FI P Y F + +++NFHLPKSTLLM+VSAF G + K+ Y+ AI YRFYSYGD
Sbjct: 286 NKFIFPPYEFSIANCMVTNFHLPKSTLLMMVSAFMGHDLMKRAYKEAILEQYRFYSYGDA 345
Query: 354 SLLF 357
L+
Sbjct: 346 MLIL 349
>gi|282900339|ref|ZP_06308290.1| Queuosine biosynthesis protein [Cylindrospermopsis raciborskii
CS-505]
gi|281194844|gb|EFA69790.1| Queuosine biosynthesis protein [Cylindrospermopsis raciborskii
CS-505]
Length = 369
Score = 245 bits (626), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 151/361 (41%), Positives = 207/361 (57%), Gaps = 19/361 (5%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVH-PNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+D++LPP IA PV PRDS+RLMV++ PN DH+ DLP L D +V NNT
Sbjct: 11 YDYELPPELIAQNPVVPRDSSRLMVINSPNTGTSTPPLDHIFRDLPELLKPGDLLVMNNT 70
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQS 124
+VI A+L G + + L N W +P K G + F Q S
Sbjct: 71 RVIPARLYGRKSTG-----ARVEVLLLEEKQHNCWLALVKPGKYFNVGTEIIFDDQGLSS 125
Query: 125 ------RLEATVIDK-WNTGEILLVFSIS-GIELERQISLVGTIPLPPYIARKRPIDARD 176
+ A VI++ NTG LL F + + L + +G +PLPPYI ++ +
Sbjct: 126 ADKLIPQFTARVIERDENTGGRLLQFDLPINVSLLHLLHKLGEVPLPPYINNSHALEEQ- 184
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK G+VAAPTAGLHFT LL +L GI+ F+TLHVG GTF PV+VED
Sbjct: 185 ---YQTVYAKHDGAVAAPTAGLHFTPELLVKLRERGIEQEFLTLHVGVGTFRPVEVEDVT 241
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H MH E + + + S K+ GGRI++VGTT +R LE + + G + P++G N+F
Sbjct: 242 THQMHEEWIEVSGDLVEKIYSTKNAGGRIIAVGTTVVRALE-GSAQTGSLQPYTGKVNLF 300
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY++R V+ L++NFHLP+S+LLMLVS+ G E +Y+ AI+ YRFYS+GD L+
Sbjct: 301 IYPGYQWRVVEGLITNFHLPRSSLLMLVSSLIGRERLLGIYKQAIASRYRFYSFGDAMLI 360
Query: 357 F 357
Sbjct: 361 L 361
>gi|238755132|ref|ZP_04616479.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
ruckeri ATCC 29473]
gi|238706692|gb|EEP99062.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
ruckeri ATCC 29473]
Length = 356
Score = 245 bits (626), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 153/365 (41%), Positives = 212/365 (58%), Gaps = 31/365 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P R RL+ +L P H + +DL L + D +
Sbjct: 1 MRVADFSFELPESLIAHYPQPQRSGCRLL----SLDGPTGTLTHGIFTDLLDKLEAGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + ++ + + + + + SK K G
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKLEVLVERVLDDHRVLAHVKASKAPKPG--TEMLL 109
Query: 120 QDGQSRLEATVIDKWNT------GEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
D +S + AT++ + +T E VFSI ++ VG IPLPPYI RP +
Sbjct: 110 GDDES-IRATMLARHDTLFELRFDEEQDVFSI--------LNAVGHIPLPPYI--DRPDE 158
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT Y++ G+VAAPTAGLHF +L+ L + GI++ FVTLHVGAGTF PV+VE
Sbjct: 159 EADRELYQTVYSQRPGAVAAPTAGLHFDEPMLAALRNKGIEMAFVTLHVGAGTFQPVRVE 218
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSG 291
++HIMHSE + A+ + K+RG R+V+VGTTS+R LE+A +EDG+I P+ G
Sbjct: 219 SIEEHIMHSEYAEVPQEVVDAVLACKARGKRVVAVGTTSVRSLESAANASEDGVIAPFYG 278
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T IFI PGY ++ VD L++NFHLP+STL+MLVSAF G + T YQ A+ YRF+SYG
Sbjct: 279 DTRIFIYPGYHYQVVDALVTNFHLPESTLIMLVSAFAGYKNTMNAYQQAVVEKYRFFSYG 338
Query: 352 DTSLL 356
D +
Sbjct: 339 DAMFI 343
>gi|127513266|ref|YP_001094463.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Shewanella
loihica PV-4]
gi|166216753|sp|A3QFF6|QUEA_SHELP RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|126638561|gb|ABO24204.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Shewanella
loihica PV-4]
Length = 345
Score = 245 bits (625), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 148/360 (41%), Positives = 211/360 (58%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R ++RL+ + N ++D +D+ +N D +V
Sbjct: 1 MRVADFSFDLPDELIARYPMPNRTASRLLTLDGNSGA---VADKQFTDILEMVNPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + + ++ + + + R SK K G I+
Sbjct: 58 FNNTRVIPARVFGQK-----QTGGKLEILVERMLDDKRILAHVRSSKSPKPGTIICL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DG E T++ + +T L + S S I LE + VG +PLPPYI RP + D Y
Sbjct: 110 DGG--YEMTMLARHDTLFELELNSESTI-LE-VLEEVGHMPLPPYI--DRPDEDADKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL+ L G+ V FVTLHVGAGTF PV+V+ DH M
Sbjct: 164 QTVYNQNPGAVAAPTAGLHFDDALLAALKEKGVNVAFVTLHVGAGTFQPVRVDSILDHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFITP 299
HSE + ++ + K+ G R+++VGTTS+R LE+A +G + +S T+IFI P
Sbjct: 224 HSEWAEVPQDVVDSIKATKAAGNRVIAVGTTSVRSLESAAKASEGELQAYSNDTDIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY F+ VD +++NFHLP+STL+ML+SAF G +E K YQHAI+ YRF+SYGD + +K
Sbjct: 284 GYEFQVVDAMVTNFHLPESTLIMLISAFAGFDEVKNAYQHAIAQKYRFFSYGDAMFVTKK 343
>gi|261856761|ref|YP_003264044.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Halothiobacillus neapolitanus c2]
gi|261837230|gb|ACX96997.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Halothiobacillus neapolitanus c2]
Length = 367
Score = 245 bits (625), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 146/368 (39%), Positives = 202/368 (54%), Gaps = 38/368 (10%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M K FD+ LPP IA RP+ PR+ ARL+V+ P + + ++D P L+ D ++
Sbjct: 1 MHTKLFDYTLPPELIAHRPIEPREHARLLVLEKE-HTPNDLRECRIADFPDLLHPGDLLI 59
Query: 61 FNNTKVITAQLNGVRFCH------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NNT+VI A++ G + I R + S H+R S K G
Sbjct: 60 LNNTRVIPARVFGHKASGGKIEVLIERLQDGFSAWCHIRAS-----------KSPAPGTT 108
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARKR 170
LH DGQ+ L N + L + ++ L + + G +PLPPYI R
Sbjct: 109 LHM---DGQATLTVK-----NRQDALFLVELTPDSLNPDVLTWLNRAGHMPLPPYIDRAD 160
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
DA+D DYQT +A G+VAAPTA LH T NLL ++ + G+K FVTLHVGAGTF PV
Sbjct: 161 --DAQDRHDYQTVFAAHDGAVAAPTASLHLTENLLEQIAAKGVKTAFVTLHVGAGTFQPV 218
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI----- 285
+V++ +H MHSE + T A+++ + RGGR+V VGTT+LR +ETA E+
Sbjct: 219 RVDNIQEHTMHSEWLNVPEETVAAIDATRERGGRVVCVGTTALRAIETAARENPTAAAQR 278
Query: 286 -INPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHA 344
I P+ G T +F+ PG D L++NFHLP+STLLMLVSA G E Y +A+
Sbjct: 279 RIAPYQGDTRLFLYPGQPVHVTDALLTNFHLPQSTLLMLVSALAGRERILAAYDYAVRAG 338
Query: 345 YRFYSYGD 352
+RF+SYGD
Sbjct: 339 FRFFSYGD 346
>gi|307702043|ref|ZP_07639050.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus mitis NCTC 12261]
gi|307616530|gb|EFN95720.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus mitis NCTC 12261]
Length = 294
Score = 245 bits (625), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 138/306 (45%), Positives = 184/306 (60%), Gaps = 14/306 (4%)
Query: 53 LNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKG 112
L DA+V N+T+V+ A+L G + + L + + W V A+P+K +K G
Sbjct: 2 LEPGDALVMNDTRVLPARLYGQK----EETGGHVELLLLKNTAGDEWEVLAKPAKRLKVG 57
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
+ F G RL A V ++ G ++ F GI LE SL G +PLPPYI K +
Sbjct: 58 TRVSF----GDGRLSAVVTEELTHGGRIVRFEYQGIFLEVLESL-GEMPLPPYIHEK--L 110
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D R+ YQT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V
Sbjct: 111 DDRE--RYQTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSV 168
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSG 291
++ D+H MHSE + A L SVK GR+++VGTTS+R LET ++ DG I SG
Sbjct: 169 DNLDEHEMHSEFYQLSEEAAATLRSVKENSGRVIAVGTTSIRTLETIGSKFDGQIQADSG 228
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
+TNIFI PGY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+G
Sbjct: 229 WTNIFIKPGYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFG 288
Query: 352 DTSLLF 357
D ++
Sbjct: 289 DAMFIY 294
>gi|327402924|ref|YP_004343762.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Fluviicola
taffensis DSM 16823]
gi|327318432|gb|AEA42924.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Fluviicola
taffensis DSM 16823]
Length = 352
Score = 245 bits (625), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 146/361 (40%), Positives = 197/361 (54%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EF FDLP IA P RD ARLMV+H I L D+ + D ++
Sbjct: 4 MKLSEFSFDLPDELIAEYPSEHRDEARLMVIHRETGK---IEHRLFKDIINYFGEGDVMI 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
NNT+V A++ G + + +I L ++ S W V P++ I+ G+ L+F
Sbjct: 61 MNNTRVFPARMYGNK----EKTGAKIEVFLLRELNRESLLWDVLVDPARKIRIGNKLYFG 116
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D L A VID + L F G E + +I+ +G PLP YI KR ++ D
Sbjct: 117 DDDS---LVAEVIDNTTSRGRTLRFLFDGPYEEFKAKITELGETPLPKYI--KREVEETD 171
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ LL RL GI VTLHVG GTF V+VED
Sbjct: 172 EERYQTIYAKEEGAVAAPTAGLHFSRELLKRLELKGINFAEVTLHVGLGTFRSVEVEDLT 231
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I A+ +N K R+ ++GTTS+R +ET+ + D ++ + G+TN F
Sbjct: 232 KHKMDSEQVIITDKAARIVNEAKKNKKRVCAIGTTSMRAVETSVSTDNMLKAFDGWTNKF 291
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F D L++NFH P STLLM++SAFCG + + Y AI Y+FYSYGD L+
Sbjct: 292 IFPPYDFSIADSLVTNFHTPLSTLLMMISAFCGHDLMMEAYHEAIKEKYKFYSYGDAMLI 351
Query: 357 F 357
Sbjct: 352 L 352
>gi|296387660|ref|ZP_06877135.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
aeruginosa PAb1]
Length = 347
Score = 245 bits (625), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 155/366 (42%), Positives = 209/366 (57%), Gaps = 40/366 (10%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAI 59
M V +F FDLP + IA P+ R ++RL+ L P ++ +DL +L D +
Sbjct: 1 MRVADFHFDLPEALIARHPLPERRASRLLA----LDGPTGTLAHRQFADLLDYLRPGDLM 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVS----PNSWSVYARPSKVIKKGDIL 115
VFNNT+VI A+L G +KE L + V + + R SK K G
Sbjct: 57 VFNNTRVIPARLFG---------QKESGGKLEVLVERVLDQHRVLAHIRASKAPKPG--T 105
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIE-----LERQISLVGTIPLPPYIARKR 170
+ G S A ++ + + +F ++ E LER VG +PLPPYI R
Sbjct: 106 RILVEGGGS---AEMLQRHDA-----LFELAFAEPVLPLLER----VGHMPLPPYI--DR 151
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
P DA D YQT YA+ G+VAAPTAGLHF LL + + G+ FVTLHVGAGTF PV
Sbjct: 152 PDDAADRERYQTVYAQRAGAVAAPTAGLHFDEALLEAIRAKGVDTAFVTLHVGAGTFQPV 211
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWS 290
+VE +DH+MH E + A+++ ++RGGR+V+VGTTS+R LE+A DG + P+S
Sbjct: 212 RVERIEDHVMHREWLEVGQDVVDAVSACRARGGRVVAVGTTSVRSLESA-ARDGELKPFS 270
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G T+IFI PG F VD L++NFHLP+STLLMLVSAF G ET Y A++ YRF+SY
Sbjct: 271 GDTDIFIYPGRPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYDAAVAQGYRFFSY 330
Query: 351 GDTSLL 356
GD +
Sbjct: 331 GDAMFI 336
>gi|24374633|ref|NP_718676.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
oneidensis MR-1]
gi|46577064|sp|Q8ECM2|QUEA_SHEON RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|24349260|gb|AAN56120.1|AE015748_8 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
oneidensis MR-1]
Length = 345
Score = 245 bits (625), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 145/363 (39%), Positives = 206/363 (56%), Gaps = 24/363 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R+++RL+ + N + D +DL +N D +V
Sbjct: 1 MRVTDFSFDLPDELIARYPMAQRNASRLLTLDGNTGT---LVDKQFTDLLGMINPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF--- 117
FNNT+VI A+L G + ++ + + + R SK K I+H
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERMLDDKRILAHVRSSKSPKVDSIIHLDGG 112
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+ +R +A E+ L+ +S +E+ + VG +PLPPYI RP + D
Sbjct: 113 YEMKMMARHDALF-------ELQLLSELSILEV---LEAVGHMPLPPYI--DRPDEDADK 160
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT Y + G+VAAPTAGLHF +L L + G+ + FVTLHVGAGTF PV+V++ +
Sbjct: 161 ERYQTVYNQNPGAVAAPTAGLHFDDAMLEALKAKGVNIAFVTLHVGAGTFQPVRVDNVLE 220
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIF 296
H MHSE + + K+ G R+V+VGTTS+R LE+A G +N +SG T+IF
Sbjct: 221 HKMHSEWANVPQDVVDLIARTKAAGNRVVAVGTTSVRSLESAARASAGQLNAFSGDTDIF 280
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+F+ VD +++NFHLP+STL+MLVSAF G E YQHAI YRF+SYGD +
Sbjct: 281 IYPGYQFQVVDAMVTNFHLPESTLIMLVSAFAGYEHVMAAYQHAIKQKYRFFSYGDAMFV 340
Query: 357 FQK 359
+K
Sbjct: 341 TKK 343
>gi|145628563|ref|ZP_01784363.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae 22.1-21]
gi|144979033|gb|EDJ88719.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae 22.1-21]
Length = 357
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 144/367 (39%), Positives = 211/367 (57%), Gaps = 19/367 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDFDLP IA P R S RL+ ++ I SD+ ++ D ++
Sbjct: 1 MRVSDFDFDLPDELIARYPKTDRVSCRLLQLNGENG---EIFHRTFSDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + + R SK K+G L F +
Sbjct: 58 FNNTRVIPARMFGRKASG-----GKIEVLVERMLDEHRFLAHIRSSKSPKEGTEL-FLGE 111
Query: 121 D--GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
D G++ V+ ++ + S L + +G +PLPPYI RP + D
Sbjct: 112 DKLGENNGIKVVMKARHSSLFEVELSDKSTALLDVLQTIGHMPLPPYI--DRPDEEADQE 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y+K+ G+VAAPTAGLHF NLL +L + G+ FVTLHVGAGTF PV+VE+ +DH
Sbjct: 170 CYQTVYSKVPGAVAAPTAGLHFDENLLEKLKAKGVNFEFVTLHVGAGTFQPVRVENIEDH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTED----GIINPWSGF 292
+MH+E + A+ + K G R+++VGTTS+R +E+A + E+ +I P+
Sbjct: 230 VMHAEYVEVSQEVCNAIIATKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSD 289
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + T Y+HA+ YRF+SYGD
Sbjct: 290 TSIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKHAVKEKYRFFSYGD 349
Query: 353 TSLLFQK 359
+ +K
Sbjct: 350 AMFINKK 356
>gi|325272158|ref|ZP_08138589.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
sp. TJI-51]
gi|324102721|gb|EGC00137.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
sp. TJI-51]
Length = 349
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 148/360 (41%), Positives = 209/360 (58%), Gaps = 28/360 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R +RL+V L P V++ DL +L D +
Sbjct: 1 MRVADFSFELPDSLIARHPLAERHGSRLLV----LDGPSGVLAHRQFPDLLEYLRPGDLM 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + ++ + + + + R SK K+G ++
Sbjct: 57 VFNNTRVIPARLFGQKASG-----GKLEVLVERVLDSHRVLAHVRASKAPKEGAVI-LID 110
Query: 120 QDGQSRLEA---TVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
G++ + A T+ + T E+L + L+R VG +PLPPYI RP + D
Sbjct: 111 GGGEAEMVARHDTLFELRFTEEVLPL-------LDR----VGHMPLPPYI--DRPDEGAD 157
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YA+ G+VAAPTAGLHF LL ++ + G++ FVTLHVGAGTF PV+V+ +
Sbjct: 158 RERYQTVYAERAGAVAAPTAGLHFDEALLEKIAAKGVERAFVTLHVGAGTFQPVRVDKIE 217
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
DH MH E + A+ + ++RGGR+++VGTTS+R LE+A DG++ +SG T+IF
Sbjct: 218 DHHMHKEWLEVSQDVVDAITACRARGGRVIAVGTTSVRSLESA-ARDGVLKAFSGDTDIF 276
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PG F VD L++NFHLP+STLLMLVSAF G ET Y A+ YRF+SYGD +
Sbjct: 277 IYPGRPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAVEQGYRFFSYGDAMFI 336
>gi|218288861|ref|ZP_03493112.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Alicyclobacillus acidocaldarius LAA1]
gi|218240950|gb|EED08127.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Alicyclobacillus acidocaldarius LAA1]
Length = 355
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 148/365 (40%), Positives = 218/365 (59%), Gaps = 25/365 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FD++LP IA +P+ RD +RL+V V+ + +++ LNS D +V
Sbjct: 1 MRVEDFDYELPEHLIAQQPLPERDQSRLLV---VDPVDRVVRHRIFAEIVEELNSGDVLV 57
Query: 61 FNNTKVITAQLNGVR---FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
N+++V+ A+L+ V+ H+ E+ + PN+W ARP+K ++ G L
Sbjct: 58 MNDSRVLPARLHAVKPDTGGHV-----ELLLVRPVDDQPNTWQCLARPAKRLRVGHRLVV 112
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSI--SGIELERQISLVGTIPLPPYIARKRPIDAR 175
DG R+E V+ + + G L+ F S I++ ++ G +PLPPYI K
Sbjct: 113 GEGDG--RVEIEVVGEEDEGIRLVRFHTNESVIDVAHRL---GEMPLPPYIHEK----LE 163
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT YAK GSVAAPTAGLHFT LL +L G+++ VTLHVG GTF PV+VE+
Sbjct: 164 DQERYQTVYAKRVGSVAAPTAGLHFTERLLQKLRDKGVQLCHVTLHVGIGTFRPVQVENV 223
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
++H MHSE + TA+ +N KS G +++VGTT+LR LE A + G++ G T+I
Sbjct: 224 EEHRMHSEWYEVSPATAEIVNRAKSEGRPVIAVGTTALRTLE-AAGQSGMLEAKQGETDI 282
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PG++F +D L++NFHLPKSTL MLV A G + K +Y+ A+ +YRF+S+GD
Sbjct: 283 FIYPGFKFHIMDGLITNFHLPKSTLFMLVCAIMGTDYAKAVYREAVERSYRFFSFGDA-- 340
Query: 356 LFQKR 360
+F KR
Sbjct: 341 MFIKR 345
>gi|323491585|ref|ZP_08096764.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
brasiliensis LMG 20546]
gi|323314161|gb|EGA67246.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
brasiliensis LMG 20546]
Length = 353
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 149/371 (40%), Positives = 213/371 (57%), Gaps = 35/371 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N + D +D+ + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQPERTASRLLQMDGNTG---ELVDGTFTDVLEQVQPGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREK--EISCTLHMRVSPNSWSVYARPSKVIKKGDILHF- 117
FNNT+VI A++ G R+E ++ + V S + R SK K G +
Sbjct: 58 FNNTRVIPARMFG-------RKESGGKLEVLVERVVDEKSILAHVRCSKSPKPGSTIFVG 110
Query: 118 ----FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
FS + +R +A K+N+ + +L + +G +PLPPYI RP +
Sbjct: 111 ENDEFSAEMVARHDALFELKFNSEQNVLAV----------LEEIGHMPLPPYI--DRPDE 158
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT Y + G+VAAPTAGLHF LL ++ + G + +VTLHVGAGTF PVKV+
Sbjct: 159 DSDKERYQTVYNQKPGAVAAPTAGLHFDEPLLEKIKAKGAEFAYVTLHVGAGTFQPVKVD 218
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-----INP 288
D DH MH+E + A+N+ K+RGGRIV+VGTTS+R LE+A +D + + P
Sbjct: 219 DIHDHHMHAEYVEVPQEVVDAINAAKARGGRIVAVGTTSVRSLESA-AQDALKKGTELVP 277
Query: 289 WSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
+ G T IFI PGY+++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ + YRF+
Sbjct: 278 FFGDTEIFIYPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYENTMNAYKHAVENKYRFF 337
Query: 349 SYGDTSLLFQK 359
SYGD+ + +K
Sbjct: 338 SYGDSMFIKKK 348
>gi|325981733|ref|YP_004294135.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Nitrosomonas sp. AL212]
gi|325531252|gb|ADZ25973.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Nitrosomonas sp. AL212]
Length = 351
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 152/364 (41%), Positives = 204/364 (56%), Gaps = 26/364 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++FDF LPP IA P R +RL+ + + D L ++LP FL + D +V
Sbjct: 8 MKTQDFDFYLPPGLIAQFPAEQRTGSRLLYLDGITNH---WQDALFTNLPDFLRAGDVLV 64
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + ++ + + R S K L
Sbjct: 65 FNDTQVIKARLLGKKAS-----GGKVEVLVERVLDDRHVVATIRASHAPKLDSQLVL--- 116
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLV----GTIPLPPYIARKRPIDARD 176
+ TVI + F E E+ ++ + G +PLPPYIAR P D
Sbjct: 117 --ADAISLTVIAREQE------FYTLRFEHEKTVAELLDSYGQLPLPPYIAR--PATMTD 166
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YA+ G+VAAPTAGLHF ++L +L +IG+ + +VTLHVGAGTF P++VE+
Sbjct: 167 EARYQTVYARNPGAVAAPTAGLHFDVDMLEQLRAIGVTMAYVTLHVGAGTFQPIRVENIV 226
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNI 295
DHIMH E I T A+ K GGRI++VGTTSLR LE A+ G + G T I
Sbjct: 227 DHIMHRETYHIPQFTVDAIKQAKISGGRILAVGTTSLRALEACASLHQGGLVAGYGDTRI 286
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRF+ +D L++NFHLP STLLMLVSAF G+E ++ YQHAI YRF+SYGD L
Sbjct: 287 FITPGYRFQIIDRLLTNFHLPCSTLLMLVSAFAGMENIRQAYQHAIKGQYRFFSYGDAML 346
Query: 356 LFQK 359
+ +K
Sbjct: 347 IERK 350
>gi|53805128|ref|YP_113199.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Methylococcus capsulatus str. Bath]
gi|81682708|sp|Q60AZ8|QUEA_METCA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|53758889|gb|AAU93180.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Methylococcus capsulatus str. Bath]
Length = 347
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 145/355 (40%), Positives = 207/355 (58%), Gaps = 24/355 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+ EF +DLP + IA P+ R ++RL+ + + D D+ L D +V
Sbjct: 1 MLKSEFHYDLPQNLIAQSPLPERSASRLLCLDGATGA---LEDKSFRDIEKLLRPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYA--RPSKVIKKGDILHFF 118
FN+T+V+ A+L G R+E + + + + A R SK + G +
Sbjct: 58 FNDTRVLPARLFG-------RKETGGAVEILLERLLGERLMLAHVRASKAPRPGT---WL 107
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDY 177
+ + + R+ D G++ L+ ++G E L+ + +G +PLPPYI R P + D
Sbjct: 108 ALEAEHRVRVVERD----GDLFLL-ELAGEEPLQTVLEQIGHMPLPPYITR--PDTSADL 160
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YA G+VAAPTAGLHF + LL RL GI + VTLHVGAGTF PV+ E+ +D
Sbjct: 161 ERYQTVYATRPGAVAAPTAGLHFDTELLGRLRGAGIDMARVTLHVGAGTFQPVRTENLED 220
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+E + +A+ + RGGR+V+VGTTS+R LETA + G + +SG T +FI
Sbjct: 221 HRMHAEYCEVGPEVVKAVERARGRGGRVVAVGTTSMRSLETAAS-GGSLRTFSGETRLFI 279
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
PG+RF VD L++NFHLP+STLL+LV AF G ET Y+HAI+ AYRF+SYGD
Sbjct: 280 KPGFRFNCVDALVTNFHLPESTLLVLVCAFAGHRETLAAYRHAIAQAYRFFSYGD 334
>gi|297616934|ref|YP_003702093.1| S-adenosylmethionine/ tRNA-ribosyltransferase-isomerase
[Syntrophothermus lipocalidus DSM 12680]
gi|297144771|gb|ADI01528.1| S-adenosylmethionine/ tRNA-ribosyltransferase-isomerase
[Syntrophothermus lipocalidus DSM 12680]
Length = 344
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 143/357 (40%), Positives = 196/357 (54%), Gaps = 28/357 (7%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ + + LPP +A PV PRD +RL+VV D L +L +V N
Sbjct: 6 LETYQYQLPPELVAQYPVQPRDHSRLLVVERETKK---FRDRYFFALAEYLGEKHVLVLN 62
Query: 63 NTKVITAQLNGVR--FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
T+VI +L G++ H+ L +R W RP++ +K G ++ F
Sbjct: 63 ETRVIPVRLRGIKETGAHVE--------ILLLRKVGEDWQALVRPARRLKPGAVIQF--- 111
Query: 121 DGQSRLEATVIDK--WNTGEILLVFSISGIE--LERQISLVGTIPLPPYIARKRPIDARD 176
+A +I + + G ++ +S LE + G +PLPPYI+R P +D
Sbjct: 112 --TCGAKAEIIQELGFAGGRVIRFQGVSDWYGFLENE----GEVPLPPYISR--PPTEQD 163
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YA GS AAPTAGLHFT LL+RL G++V + LHVG GTF PV+ D
Sbjct: 164 KETYQTVYAARPGSAAAPTAGLHFTEQLLTRLTQQGVEVVKLLLHVGLGTFRPVESPDIR 223
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H MH E + A+ LN ++ G RIV+VGTT +R LE+A E P GFT+ +
Sbjct: 224 QHRMHQEYYELGEQEAERLNDARAAGKRIVAVGTTVVRTLESAYEEKRGYVPRQGFTDCY 283
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
I PGYRFRAVD L++NFHLPKS+LLMLV AF GI+ T Y+HA+ + YRF+SYGD
Sbjct: 284 IYPGYRFRAVDQLITNFHLPKSSLLMLVCAFAGIDLTLAAYRHAVENRYRFFSYGDA 340
>gi|117919882|ref|YP_869074.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
sp. ANA-3]
gi|166217771|sp|A0KV49|QUEA_SHESA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|117612214|gb|ABK47668.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Shewanella
sp. ANA-3]
Length = 345
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 144/361 (39%), Positives = 206/361 (57%), Gaps = 20/361 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R+++RL+ + N ++D +DL +N D +V
Sbjct: 1 MRVTDFSFDLPDELIARYPMAQRNASRLLTLDGNTGT---LADKQFTDLLGMINPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK K I+H
Sbjct: 58 FNNTRVIPARLFGQKASG-----GKLEILVERMLDDKRILAHVRSSKSPKVDSIIHL--- 109
Query: 121 DGQSRLE-ATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
DG ++ A D E+L S + + + VG +PLPPYI RP + D
Sbjct: 110 DGGYEMKMAARYDALFELELL-----SDLTILEVLEAVGHMPLPPYI--DRPDEDADKER 162
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y + G+VAAPTAGLHF +L L + G+ + FVTLHVGAGTF PV+V++ +H
Sbjct: 163 YQTVYNQNPGAVAAPTAGLHFDDAMLDALKAKGVNIAFVTLHVGAGTFQPVRVDNVLEHK 222
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFIT 298
MHSE + + K+ G R+V+VGTTS+R LE+A +G + +SG T+IFI
Sbjct: 223 MHSEWANVPQDVVDLIAQTKAAGKRVVAVGTTSVRSLESAARASEGELKAFSGDTDIFIY 282
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY+F+ VD +++NFHLP+STL+MLVSAF G + YQHAI+ YRF+SYGD + +
Sbjct: 283 PGYQFQIVDAMITNFHLPESTLIMLVSAFAGFDHVMAAYQHAITQKYRFFSYGDAMFVTK 342
Query: 359 K 359
K
Sbjct: 343 K 343
>gi|153835756|ref|ZP_01988423.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
harveyi HY01]
gi|148867570|gb|EDL66888.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
harveyi HY01]
Length = 350
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 149/370 (40%), Positives = 214/370 (57%), Gaps = 33/370 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N + D +D+ + + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQPERTASRLLQMDGNTG---ELIDGTFTDVLEQVQAGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCH------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
FNNT+VI A+L G + + R E S H+R S + +P I G+
Sbjct: 58 FNNTRVIPARLFGRKESGGKLEVLVERMLDEKSILAHVRCSKSP-----KPGTTILVGEN 112
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
+ +Q +R +A K+N+ + +L + +G +PLPPYI RP +
Sbjct: 113 DEYSAQ-MVARHDALFELKFNSDKTVLEI----------LEEIGHMPLPPYI--DRPDED 159
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D YQT Y + G+VAAPTAGLHF LL ++ + G + +VTLHVGAGTF PVKV+D
Sbjct: 160 ADKERYQTVYNQKPGAVAAPTAGLHFDDVLLEKIKAKGAEFAYVTLHVGAGTFQPVKVDD 219
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-----INPW 289
+DH MH+E + A+N+ K+RGGRIV+VGTTS+R LE+A +D + + P+
Sbjct: 220 INDHHMHAEYVEVPQDVVDAINATKARGGRIVAVGTTSVRSLESA-AQDALKKGTELVPF 278
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
G T IFI PGY ++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ + YRF+S
Sbjct: 279 FGDTEIFIYPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYENTMNAYKHAVENKYRFFS 338
Query: 350 YGDTSLLFQK 359
YGD+ + +K
Sbjct: 339 YGDSMFIKKK 348
>gi|224457398|ref|ZP_03665871.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. tularensis MA00-2987]
gi|254875098|ref|ZP_05247808.1| queA, S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Francisella tularensis subsp. tularensis MA00-2987]
gi|254841097|gb|EET19533.1| queA, S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Francisella tularensis subsp. tularensis MA00-2987]
gi|282159506|gb|ADA78897.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. tularensis NE061598]
Length = 338
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 136/357 (38%), Positives = 211/357 (59%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LP IA P+ RD++RL+ ++ I+D+ +D F+N D +V
Sbjct: 1 MKTDDFDYKLPEELIASYPLENRDASRLLKLNKQTGE---IADYKFTDFIDFINPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV+ A+L G + ++ + +P + + + ++ G ++
Sbjct: 58 FNNSKVMLARLYGSKTTG-----AKLEYLIERIKTPKLFETHIKANRSPAIGSEIYV--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ L A V+DK G + L+ ++ + + G IPLPPY+ KR + D Y
Sbjct: 110 --EDTL-AKVLDK--DGGMYLLEIQGDKDIYQLMEEFGHIPLPPYM--KRDDEEFDAERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GSVAAPTAGLHF+ L+ ++ G+ + ++TLHVG+GTF PV+V+D + H M
Sbjct: 163 QTVYAQDLGSVAAPTAGLHFSKELMQQIKDKGVDIAYITLHVGSGTFKPVQVDDVESHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E+ + Q + K GGR++++GTTS+R LETA ++G I P+ G T+IF+ PG
Sbjct: 223 HAEVISVPVEVCQKIRQTKENGGRVIAIGTTSVRSLETA-GQNGQIEPYQGETDIFLYPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F VD +++NFHLPKSTL+MLVSAF E+ K Y+HAI+ YRF+SYGD +F
Sbjct: 282 KKFNVVDAMITNFHLPKSTLIMLVSAFADKEKIIKAYEHAIAERYRFFSYGDAMFIF 338
>gi|222056534|ref|YP_002538896.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Geobacter
sp. FRC-32]
gi|254764278|sp|B9M5N6|QUEA_GEOSF RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|221565823|gb|ACM21795.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Geobacter
sp. FRC-32]
Length = 343
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 142/362 (39%), Positives = 210/362 (58%), Gaps = 24/362 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +K+F++ LPP IA P R+SARLM + I + +V+D+ + + D +V
Sbjct: 1 MQLKDFNYHLPPELIAQEPAHRRESARLMTLDRKSG---EIGEGVVADIAEYFVAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRRE----KEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
N+TKVI A+L G R+E E+ + W + SK G ++
Sbjct: 58 INDTKVIPARLLG-------RKETGGKAEVFLVRRRDEAGQVWQCLIKCSKSPAPGSLI- 109
Query: 117 FFSQDGQSRL-EATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
S+ +R+ E + D W ++ FS L+R + ++G++PLPPYI RP +
Sbjct: 110 LLSEGVTARIVERSEHDTW-----IVSFSPEEGFLDR-LEMIGSMPLPPYI--HRPANVI 161
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT +A+ +G+VAAPTAGLHFT +LL ++ + G+ + +TLHVG GTFMPV+V+D
Sbjct: 162 DGERYQTVFARERGAVAAPTAGLHFTESLLQKIRARGVDILPLTLHVGLGTFMPVRVKDL 221
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+H MH E I TA+A+ K G R++++GTT+ R LE A EDG ++ G +I
Sbjct: 222 SEHRMHREYYRIPETTAKAVTDRKKAGKRVIALGTTTTRALEHAAAEDGSLDAKEGEADI 281
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGY F+ VD L++NFHLP+STLLMLVSAF G + Y A+ +RF+SYGD
Sbjct: 282 FIVPGYAFKTVDALITNFHLPESTLLMLVSAFAGRDRLFNAYAEAVRRKFRFFSYGDAMF 341
Query: 356 LF 357
++
Sbjct: 342 IY 343
>gi|296122043|ref|YP_003629821.1| S-adenosylmethionine/tRNA-ribosyltransferase-isom erase
[Planctomyces limnophilus DSM 3776]
gi|296014383|gb|ADG67622.1| S-adenosylmethionine/tRNA-ribosyltransferase-isom erase
[Planctomyces limnophilus DSM 3776]
Length = 364
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 142/363 (39%), Positives = 198/363 (54%), Gaps = 22/363 (6%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
+D++LPP IA P+ RD++R++V+H + +I + +LP FL +D IV NN+K
Sbjct: 13 YDYELPPELIAQHPLPERDASRMLVIHRSTG---MIEHRFIKELPLFLKPHDLIVVNNSK 69
Query: 66 VITAQLNGVRFCHINRREK-----------EISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
V+ A+L GVR + E +I R+ W P+ I+
Sbjct: 70 VVPARLQGVRASTGGKWEGLFLGVTTSGEWQIIGQTRGRLVAGEWITIPVPATHIENA-- 127
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
+ S L+ +I++ G I S I + G++PLPPYI R +A
Sbjct: 128 ----ASRQNSDLQLQLIER-GEGGIWKASPQSEISTWDLLEQYGSMPLPPYIHRDDE-EA 181
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D V YQT ++ QGSVAAPTAGLHFT L R + G K VTLHVG GTF PV E
Sbjct: 182 EDRVRYQTIFSGPQGSVAAPTAGLHFTPALRDRCAASGAKFAEVTLHVGMGTFRPVSSER 241
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
+H MH+E + AQ + S KS GGR++++GTTS R LE+A + G+ PW G TN
Sbjct: 242 IAEHQMHTETCELSEDVAQKIRSTKSEGGRVLAIGTTSARTLESAARKVGVGLPWQGETN 301
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
+F+ P F V+ L++NFH+PKSTLLMLV A G + T + Y+ A+ YRF SYGD
Sbjct: 302 LFLRPPCEFLQVEALLTNFHVPKSTLLMLVCAMAGYDLTMQAYKEAVEQRYRFLSYGDCM 361
Query: 355 LLF 357
L+
Sbjct: 362 LIL 364
>gi|171058260|ref|YP_001790609.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Leptothrix
cholodnii SP-6]
gi|170775705|gb|ACB33844.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Leptothrix
cholodnii SP-6]
Length = 356
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 151/363 (41%), Positives = 203/363 (55%), Gaps = 27/363 (7%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
V +FDFDLPP IA P R +RL+ + S P D + +LP LN D +VFN
Sbjct: 7 VADFDFDLPPELIAQHPAPERSGSRLL----DASAPAQPVDRIFHELPGLLNPGDLLVFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS-------WSVYARPSKVIKKGDIL 115
+T+VI A+L G + L RV P + W+ + R SK + G +
Sbjct: 63 DTQVIRARLFGAK------DSGGAVEALVERVLPAAAGGGHEVWA-HLRASKSPRAGQSV 115
Query: 116 HFFSQDGQSRLEATVIDKWNTGEIL--LVFSISGIELERQISLVGTIPLPPYIARKRPID 173
F D + A V+ + + L L F L + G +PLPPYI D
Sbjct: 116 -LFRNDQGEQFSADVLGRCGPEDSLFHLRFPSDAFAL---LERYGHVPLPPYITHADEAD 171
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT +A+ G+VAAPTA LHF LL+ L + G++ VTLHVGAGTF PV+V+
Sbjct: 172 --DVRRYQTVFARHPGAVAAPTAALHFDEALLAALEARGVRRASVTLHVGAGTFQPVRVD 229
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
D H MHSE + T A+ + ++ GG++V+VGTT+LR LE+A G++ + T
Sbjct: 230 RLDQHRMHSEWFEVPQATVDAIAATRAAGGKVVAVGTTTLRALESA-ARGGVLRAGAQET 288
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFITPG+ F+ VD L++NFHLPKSTLLMLVSAF G +Y+HAIS YRF+SYGD
Sbjct: 289 DIFITPGFAFQVVDRLVTNFHLPKSTLLMLVSAFAGHATMHALYRHAISRGYRFFSYGDA 348
Query: 354 SLL 356
LL
Sbjct: 349 MLL 351
>gi|28868619|ref|NP_791238.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. tomato str. DC3000]
gi|37999794|sp|Q9L6W9|QUEA_PSESM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|8037772|gb|AAF71483.1|AF232004_1 QueA [Pseudomonas syringae pv. tomato]
gi|28851857|gb|AAO54933.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. tomato str. DC3000]
gi|331019401|gb|EGH99457.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. lachrymans str. M302278PT]
Length = 354
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 151/354 (42%), Positives = 205/354 (57%), Gaps = 22/354 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R S+RL+ L P ++ +DL L S D +
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLL----TLDGPTGALAHRQFTDLLEHLRSGDLM 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 57 VFNNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRASKSPKPGSSILI-- 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
DG EA ++ + + L F+ + L + VG +PLPPYI RP + D
Sbjct: 110 -DGGG--EAEMVARHDA-LFELRFAEEVLPL---LDRVGHMPLPPYI--DRPDEGADRER 160
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ G+VAAPTAGLHF L+ + + G++ FVTLHVGAGTF PV+VE +DH
Sbjct: 161 YQTVYAQRAGAVAAPTAGLHFDQPLMEAIAAKGVETAFVTLHVGAGTFQPVRVEQIEDHH 220
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE + A+ + ++RGGR+++VGTTS+R LE+A DG + P+SG T+IFI P
Sbjct: 221 MHSEWLEVSQDVVDAVAACRARGGRVIAVGTTSVRSLESA-ARDGQLKPFSGDTDIFIYP 279
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
G F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+SYGD
Sbjct: 280 GRPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFSYGDA 333
>gi|167770633|ref|ZP_02442686.1| hypothetical protein ANACOL_01979 [Anaerotruncus colihominis DSM
17241]
gi|167667228|gb|EDS11358.1| hypothetical protein ANACOL_01979 [Anaerotruncus colihominis DSM
17241]
Length = 342
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 143/366 (39%), Positives = 199/366 (54%), Gaps = 33/366 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHL-VSDLPAFLNSNDAI 59
M +F F+LP +IA P+ PRD +R++ + HL DLP +L++ D +
Sbjct: 1 MKTSDFFFELPERQIAQTPIEPRDHSRMLYLDRQTGA----VKHLHFYDLPDYLDAGDTL 56
Query: 60 VFNNTKVITAQLNGVR--------FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKK 111
+ N ++VI A+L GV+ F + ++E++I W V +P K K
Sbjct: 57 IVNTSRVIPARLYGVKEYSGGHMQFLLLEQKERDI------------WEVMVKPGKKAKT 104
Query: 112 GDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRP 171
G F G L V+ G L+ G + + +G +PLPPYI
Sbjct: 105 GARFVF----GDGLLVGEVLQTVEGGNRLVRMYYEGPSIYPVLEKIGNMPLPPYIT---- 156
Query: 172 IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK 231
+ D YQT Y+K GS AAPTAGLHFT L+ RL GI + V LHVG GTF PV+
Sbjct: 157 AELSDRERYQTIYSKQPGSAAAPTAGLHFTPELIDRLREKGINLANVVLHVGIGTFRPVR 216
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSG 291
VED H MHSE ++ TA +N +RG R++ VGTTS R +E+ ++ G I G
Sbjct: 217 VEDVTKHHMHSEHYYLPQETADLINETHARGKRVIGVGTTSCRTVESVASKCGEIKADEG 276
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T+IFI PGY F+ +D L++NFHLP+STL+MLVSAF G E T + YQ A+ YRF+S+G
Sbjct: 277 DTSIFIYPGYTFKVLDGLITNFHLPESTLIMLVSAFAGYEHTMRAYQIAVGENYRFFSFG 336
Query: 352 DTSLLF 357
D L+
Sbjct: 337 DAMLIL 342
>gi|134301766|ref|YP_001121734.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. tularensis WY96-3418]
gi|172044163|sp|A4IXG2|QUEA_FRATW RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|134049543|gb|ABO46614.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. tularensis WY96-3418]
Length = 338
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 136/357 (38%), Positives = 211/357 (59%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LP IA P+ RD++RL+ ++ I+D+ +D F+N D +V
Sbjct: 1 MKTDDFDYKLPEELIASYPLENRDASRLLKLNKQTGE---IADYKFTDFIDFINPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV+ A+L G + ++ + +P + + + ++ G ++
Sbjct: 58 FNNSKVMLARLYGSKTTG-----AKLEYLIERIKNPKLFETHIKANRSPAIGSEIYV--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ L A V+DK G + L+ ++ + + G IPLPPY+ KR + D Y
Sbjct: 110 --EDTL-AKVLDK--DGGMYLLEIQGDKDIYQLMEEFGHIPLPPYM--KRDDEEFDAERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GSVAAPTAGLHF+ L+ ++ G+ + ++TLHVG+GTF PV+V+D + H M
Sbjct: 163 QTVYAQDLGSVAAPTAGLHFSKELMQQIKDKGVDIAYITLHVGSGTFKPVQVDDVESHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E+ + Q + K GGR++++GTTS+R LETA ++G I P+ G T+IF+ PG
Sbjct: 223 HAEVISVPVEVCQKIRQTKENGGRVIAIGTTSVRSLETA-GQNGQIEPYQGETDIFLYPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F VD +++NFHLPKSTL+MLVSAF E+ K Y+HAI+ YRF+SYGD +F
Sbjct: 282 KKFNVVDAMITNFHLPKSTLIMLVSAFADKEKIIKAYEHAIAERYRFFSYGDAMFIF 338
>gi|269962429|ref|ZP_06176779.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase [Vibrio
harveyi 1DA3]
gi|269832925|gb|EEZ87034.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase [Vibrio
harveyi 1DA3]
Length = 350
Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 149/370 (40%), Positives = 213/370 (57%), Gaps = 33/370 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N + D +D+ + + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQPERTASRLLQMDGNTG---ELIDGTFTDVLEQVQAGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCH------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
FNNT+VI A+L G + + R E S H+R S + +P I G+
Sbjct: 58 FNNTRVIPARLFGRKESGGKLEVLVERMLDEKSILAHVRCSKSP-----KPGTTILVGEN 112
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
+ +Q +R +A K+N + +L + +G +PLPPYI RP +
Sbjct: 113 DEYSAQ-MVARHDALFELKFNADKTVLEI----------LEEIGHMPLPPYI--DRPDED 159
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D YQT Y + G+VAAPTAGLHF LL ++ + G + +VTLHVGAGTF PVKV+D
Sbjct: 160 ADKERYQTVYNQKPGAVAAPTAGLHFDDVLLEKIKAKGAEFAYVTLHVGAGTFQPVKVDD 219
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-----INPW 289
+DH MH+E + A+N+ K+RGGRIV+VGTTS+R LE+A +D + + P+
Sbjct: 220 INDHHMHAEYVEVPQDVVDAINATKARGGRIVAVGTTSVRSLESA-AQDALKKGTELVPF 278
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
G T IFI PGY ++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ + YRF+S
Sbjct: 279 FGDTEIFIYPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYENTMNAYKHAVENKYRFFS 338
Query: 350 YGDTSLLFQK 359
YGD+ + +K
Sbjct: 339 YGDSMFIKKK 348
>gi|297568244|ref|YP_003689588.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfurivibrio alkaliphilus AHT2]
gi|296924159|gb|ADH84969.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfurivibrio alkaliphilus AHT2]
Length = 358
Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 142/370 (38%), Positives = 205/370 (55%), Gaps = 30/370 (8%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+ LPP IA +P RD +RL+V +SD L D+ ++L D +VFN
Sbjct: 6 LDDYDYHLPPELIAQQPPPRRDGSRLLVCDGRRD--FALSDQLFPDMLSWLAPGDLLVFN 63
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSP-------------NSWSVYARPSKVI 109
+T+V A+L+G +E L + P +W + + SK
Sbjct: 64 DTRVFPARLSG-------HKESGGRVELLLLAYPVLSDVSGPGATEAEAWGLL-KSSKGA 115
Query: 110 KKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARK 169
+ G L F L A V +K G++ + + G L ++ G +PLPPYI R+
Sbjct: 116 RPGTWLQFGDD-----LRALVEEKGEGGKVRVRL-VLGAPLADCLARYGRMPLPPYIKRE 169
Query: 170 RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
+ D YQT YA+ G+VAAPTAGLHFT LL ++ G+ + +TLHVG GTF P
Sbjct: 170 NEQE-EDRRRYQTIYAQTPGAVAAPTAGLHFTQELLGQIKKKGVGMAHITLHVGYGTFAP 228
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPW 289
V+ +D H +H+E I A+ +N K+ GGRI +VGTTS+R LE A EDG +NP
Sbjct: 229 VRSQDIRRHQIHAEEYLISRENAELINRTKAAGGRIWAVGTTSVRTLEAAAGEDGRVNPG 288
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
SG ++I PGY F+ VD L++NFHLP+S+LL LVSA G E + Y+HA++ YRF+S
Sbjct: 289 SGSCRLYIYPGYSFKVVDNLLTNFHLPRSSLLFLVSALAGRENILRAYRHAVAERYRFFS 348
Query: 350 YGDTSLLFQK 359
YGD + +K
Sbjct: 349 YGDAMAIIRK 358
>gi|187477350|ref|YP_785374.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bordetella
avium 197N]
gi|115421936|emb|CAJ48456.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bordetella
avium 197N]
Length = 346
Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 148/353 (41%), Positives = 205/353 (58%), Gaps = 22/353 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FD+DLPP IA P R +RL+ +L + D +DL A L ND +VFN
Sbjct: 6 LSDFDYDLPPELIAQTPAAQRGGSRLL----HLDAGSQLHDRQFADLLALLRPNDLLVFN 61
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+VI A+L G + ++ + P+ + R SK G L G
Sbjct: 62 DTRVIKARLTGQKATG-----GKVEVLVERITEPDRALAHVRASKSPGPGMRLELAG--G 114
Query: 123 QSRLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
R E GE+ L F+ ++L + G PLPPYI ++ D YQ
Sbjct: 115 AVRAEVL----GRQGELFDLRFAGPVLDL---LEAHGATPLPPYITHS--AESEDNERYQ 165
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YA+ G+VAAPTAGLHF ++L+R+ ++G+ FVTLHVGAGTF PV+VE D+HIMH
Sbjct: 166 TVYAREPGAVAAPTAGLHFDQDMLARIEALGVARAFVTLHVGAGTFQPVRVEKIDEHIMH 225
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPG 300
+E + T QA+ ++ GGR+++VGTTS+R LE+A DG + G T +FITPG
Sbjct: 226 AEWYTVPEATVQAIARARAAGGRVIAVGTTSVRALESAAAAGDGPLAAAQGDTRLFITPG 285
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
YR+R VD L++NFHLP+STLLMLVSA GIE ++ Y HA++ YRF+SYGD
Sbjct: 286 YRYRVVDALITNFHLPQSTLLMLVSALAGIEPIRRAYAHAVAGRYRFFSYGDA 338
>gi|332108485|gb|EGJ09709.1| putative queuosine S-adenosylmethionine:tRNA
ribosyltransferase-isomerase [Rubrivivax benzoatilyticus
JA2]
Length = 344
Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 148/371 (39%), Positives = 204/371 (54%), Gaps = 47/371 (12%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF LPP IA P R ++RL+ L D + +LP L D +VFN
Sbjct: 6 LSDFDFPLPPELIAQHPAPERSASRLLDGRGALPV-----DRVFRELPQLLAPGDLLVFN 60
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+VI A+L+G + P SV A +V+ ++L
Sbjct: 61 DTRVIKARLHGEK--------------------PTGGSVEALVERVLGGHEVLAHLRASK 100
Query: 123 QSRLEATV--IDKWNTGEILLVFSISG------------IELERQISLVGTIPLPPYIAR 168
R TV D ++ E+L + G + LER G +PLPPYI
Sbjct: 101 SPRPGTTVRFADAFDA-EVLGRDGVDGSLFHLRLPDDPFVLLERH----GHVPLPPYITH 155
Query: 169 KRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFM 228
+ A D YQT +A G+VAAPTA LHF + +L+ L + G+K VTLHVGAGTF
Sbjct: 156 EDA--AEDVERYQTVFAARPGAVAAPTASLHFDAGVLAALDARGVKRAAVTLHVGAGTFQ 213
Query: 229 PVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINP 288
PV+ E+ D+H MH E +DA T +A+ ++RGGRIV+ GTT+LR LE+A G +
Sbjct: 214 PVRAENLDEHRMHRERWEVDAATVEAIRETRARGGRIVAAGTTTLRALESAAI-GGALEA 272
Query: 289 WSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
+G T++FI PG+ FR VD+L++NFHLPKSTLLMLVSAF G E +Y+HA+ YRF+
Sbjct: 273 GAGDTDLFIRPGFEFRVVDLLVTNFHLPKSTLLMLVSAFTGFEHMHALYRHAVEARYRFF 332
Query: 349 SYGDTSLLFQK 359
SYGD LL ++
Sbjct: 333 SYGDAMLLERR 343
>gi|56708277|ref|YP_170173.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. tularensis SCHU S4]
gi|110670748|ref|YP_667305.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. tularensis FSC198]
gi|254370761|ref|ZP_04986766.1| queuine tRNA-ribosyltransferase [Francisella tularensis subsp.
tularensis FSC033]
gi|81597340|sp|Q5NFL9|QUEA_FRATT RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|123359436|sp|Q14H21|QUEA_FRAT1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|56604769|emb|CAG45848.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. tularensis SCHU S4]
gi|110321081|emb|CAL09231.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. tularensis FSC198]
gi|151569004|gb|EDN34658.1| queuine tRNA-ribosyltransferase [Francisella tularensis subsp.
tularensis FSC033]
Length = 340
Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 136/357 (38%), Positives = 211/357 (59%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LP IA P+ RD++RL+ ++ I+D+ +D F+N D +V
Sbjct: 3 MKTDDFDYKLPEELIASYPLENRDASRLLKLNKQTGE---IADYKFTDFIDFINPGDLLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV+ A+L G + ++ + +P + + + ++ G ++
Sbjct: 60 FNNSKVMLARLYGSKTTG-----AKLEYLIERIKTPKLFETHIKANRSPAIGSEIYV--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ L A V+DK G + L+ ++ + + G IPLPPY+ KR + D Y
Sbjct: 112 --EDTL-AKVLDK--DGGMYLLEIQGDKDIYQLMEEFGHIPLPPYM--KRDDEEFDAERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GSVAAPTAGLHF+ L+ ++ G+ + ++TLHVG+GTF PV+V+D + H M
Sbjct: 165 QTVYAQDLGSVAAPTAGLHFSKELMQQIKDKGVDIAYITLHVGSGTFKPVQVDDVESHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E+ + Q + K GGR++++GTTS+R LETA ++G I P+ G T+IF+ PG
Sbjct: 225 HAEVISVPVEVCQKIRQTKENGGRVIAIGTTSVRSLETA-GQNGQIEPYQGETDIFLYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F VD +++NFHLPKSTL+MLVSAF E+ K Y+HAI+ YRF+SYGD +F
Sbjct: 284 KKFNVVDAMITNFHLPKSTLIMLVSAFADKEKIIKAYEHAIAERYRFFSYGDAMFIF 340
>gi|148546106|ref|YP_001266208.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
putida F1]
gi|166216741|sp|A5VYR4|QUEA_PSEP1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|148510164|gb|ABQ77024.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Pseudomonas putida F1]
gi|313497201|gb|ADR58567.1| QueA [Pseudomonas putida BIRD-1]
Length = 349
Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 148/360 (41%), Positives = 207/360 (57%), Gaps = 28/360 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R +RL+V L P ++ DL +L D +
Sbjct: 1 MRVADFSFELPDSLIARHPLAERHGSRLLV----LDGPTGALAHRQFPDLLDYLRPGDLM 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + ++ + + + + R SK K G ++
Sbjct: 57 VFNNTRVIPARLFGQKAS-----GGKLEVLVERVLDSHRVLAHVRASKAPKVGAVI-LID 110
Query: 120 QDGQSRLEA---TVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
G++ + A T+ + T E+L + L+R VG +PLPPYI RP + D
Sbjct: 111 GGGEAEMVARHDTLFELRFTEEVLPL-------LDR----VGHMPLPPYI--DRPDEGAD 157
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YA+ G+VAAPTAGLHF LL ++ G++ FVTLHVGAGTF PV+V+ +
Sbjct: 158 RERYQTVYAQRAGAVAAPTAGLHFDEALLEKIADKGVERAFVTLHVGAGTFQPVRVDKIE 217
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
DH MH E + A+ + ++RGGR+++VGTTS+R LE+A DG++ +SG T+IF
Sbjct: 218 DHHMHKEWLEVGQDVVDAIEACRARGGRVIAVGTTSVRSLESA-ARDGVLKAFSGDTDIF 276
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PG F VD L++NFHLP+STLLMLVSAF G ET Y A+ H YRF+SYGD +
Sbjct: 277 IYPGRPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAVEHGYRFFSYGDAMFI 336
>gi|51102975|gb|AAT96122.1| QueA [Pseudomonas viridiflava]
Length = 354
Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 148/354 (41%), Positives = 203/354 (57%), Gaps = 22/354 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP S IA P+ R S+RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFDLPDSLIARHPLAERRSSRLLTLD---GVSGALAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRASKSPKPGSSILI--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSIS-GIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
DG EA ++ + + +F + E+ + VG +PLPPYI RP + D
Sbjct: 110 DGGG--EAEMVARHDA-----LFELRFAEEVLPLLDRVGHMPLPPYI--DRPDEGADRER 160
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF PV+VE +DH
Sbjct: 161 YQTVYAQRAGAVAAPTAGLHFDQPLLEAIAAKGVETTFVTLHVGAGTFQPVRVEQIEDHH 220
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH+E + A+ + + RGGR+++VGTTS+R LE+A DG++ P+SG T+IFI P
Sbjct: 221 MHTEWLEVGQDVVDAVAACRERGGRVIAVGTTSVRSLESA-ARDGVLKPFSGDTDIFIYP 279
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
G F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+SYGD
Sbjct: 280 GRPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFSYGDA 333
>gi|313205951|ref|YP_004045128.1| s-adenosylmethionine--tRNA ribosyltransferase-isomerase [Riemerella
anatipestifer DSM 15868]
gi|312445267|gb|ADQ81622.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Riemerella
anatipestifer DSM 15868]
Length = 349
Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 142/364 (39%), Positives = 198/364 (54%), Gaps = 22/364 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F+F+LPP +A P RD ARLMV++ I L D+ + + ND +
Sbjct: 1 MKTSDFNFNLPPELLAEHPSEHRDEARLMVLNRKNQT---IEHKLFKDVIDYFDENDLFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREK-----EISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
FNNTKV A+L G +EK E+ + W V P++ I+ G+ L
Sbjct: 58 FNNTKVFPARLYG-------NKEKTGAKIEVFLLRELDKETRVWDVLVDPARKIRIGNKL 110
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPID 173
FF +D L A VID + L F G E ++ +G PLP YI KR ++
Sbjct: 111 -FFDED--ESLVAEVIDNTTSRGRTLRFLYDGSYEEFRAKLKELGETPLPKYI--KREVE 165
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT YAK +G+VAAPTAGLHF+ +L+ RL GI VTLHVG GTF P++VE
Sbjct: 166 PEDAERYQTIYAKKEGAVAAPTAGLHFSKHLMKRLEIKGINFAEVTLHVGLGTFNPIEVE 225
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
D H M E FID A +N RI +VGTT++R +ET+ + + ++ + G+T
Sbjct: 226 DLSKHKMECEEAFIDQKNADIINKAIDEDRRICAVGTTTMRTIETSVSSNRKLSAYHGWT 285
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
N FI P Y F D +++NFH PKSTL+M+++AF G + Y+ A+ Y+FYSYGD
Sbjct: 286 NKFIYPPYDFAVADSMITNFHTPKSTLIMMIAAFAGKDFVMHAYEEAVKEKYKFYSYGDA 345
Query: 354 SLLF 357
L+
Sbjct: 346 MLIL 349
>gi|62260381|gb|AAX77902.1| unknown protein [synthetic construct]
Length = 375
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 136/357 (38%), Positives = 211/357 (59%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LP IA P+ RD++RL+ ++ I+D+ +D F+N D +V
Sbjct: 29 MKTDDFDYKLPEELIASYPLENRDASRLLKLNKQTGE---IADYKFTDFIDFINPGDLLV 85
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV+ A+L G + ++ + +P + + + ++ G ++
Sbjct: 86 FNNSKVMLARLYGSKTTG-----AKLEYLIERIKTPKLFETHIKANRSPAIGSEIYV--- 137
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ L A V+DK G + L+ ++ + + G IPLPPY+ KR + D Y
Sbjct: 138 --EDTL-AKVLDK--DGGMYLLEIQGDKDIYQLMEEFGHIPLPPYM--KRDDEEFDAERY 190
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GSVAAPTAGLHF+ L+ ++ G+ + ++TLHVG+GTF PV+V+D + H M
Sbjct: 191 QTVYAQDLGSVAAPTAGLHFSKELMQQIKDKGVDIAYITLHVGSGTFKPVQVDDVESHKM 250
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E+ + Q + K GGR++++GTTS+R LETA ++G I P+ G T+IF+ PG
Sbjct: 251 HAEVISVPVEVCQKIRQTKENGGRVIAIGTTSVRSLETA-GQNGQIEPYQGETDIFLYPG 309
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F VD +++NFHLPKSTL+MLVSAF E+ K Y+HAI+ YRF+SYGD +F
Sbjct: 310 KKFNVVDAMITNFHLPKSTLIMLVSAFADKEKIIKAYEHAIAERYRFFSYGDAMFIF 366
>gi|330872901|gb|EGH07050.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. morsprunorum str. M302280PT]
Length = 354
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 151/354 (42%), Positives = 205/354 (57%), Gaps = 22/354 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R S+RL+ L P ++ +DL L S D +
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLL----TLDGPTGALAHRQFTDLLEHLRSGDLM 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 57 VFNNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRASKSPKPGSSILI-- 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
DG EA ++ + + L F+ + L + VG +PLPPYI RP + D
Sbjct: 110 -DGGG--EAEMVARHDA-LFELRFAEEVLPL---LDRVGHMPLPPYI--DRPDEGADRER 160
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ G+VAAPTAGLHF L+ + + G++ FVTLHVGAGTF PV+VE +DH
Sbjct: 161 YQTVYAQRAGAVAAPTAGLHFDQPLMEAIAAKGVETAFVTLHVGAGTFQPVRVEQIEDHH 220
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE + A+ + ++RGGR+++VGTTS+R LE+A DG + P+SG T+IFI P
Sbjct: 221 MHSEWLEVSQDVVDAVAACRARGGRVIAVGTTSVRSLESA-ARDGHLKPFSGDTDIFIYP 279
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
G F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+SYGD
Sbjct: 280 GRPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFSYGDA 333
>gi|325286897|ref|YP_004262687.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase [Cellulophaga
lytica DSM 7489]
gi|324322351|gb|ADY29816.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase [Cellulophaga
lytica DSM 7489]
Length = 349
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 144/363 (39%), Positives = 203/363 (55%), Gaps = 22/363 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F+F+LP + +A P RD A+LMV+H I + DL + + D +V
Sbjct: 1 MKLSSFNFELPDNLLAEYPSEHRDEAKLMVIHRETGK---IEHKMFKDLINYFDEGDVMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREK-----EISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
NNTKV A+L G +EK E+ + W V P++ I+ G+ L
Sbjct: 58 LNNTKVFPARLYG-------NKEKTGARIEVFLLRELNAEQRLWDVLVDPARKIRIGNKL 110
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPID 173
+F + L A VID + L F G + +++ +G PLP YI KR ++
Sbjct: 111 YFGDDE---TLVAEVIDNTTSRGRTLRFLYDGSYTDFRQKLKDLGETPLPKYI--KREVE 165
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT YAK +G+VAAPTAGLHF+ +LL RL G+ +TLHVG GTF PV+VE
Sbjct: 166 ESDEDRYQTIYAKHEGAVAAPTAGLHFSKHLLKRLEIKGVDFAELTLHVGLGTFNPVEVE 225
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
D H M SE ID + +N+ RI ++GTT++R LE+A + +G +N + G+T
Sbjct: 226 DLSKHKMDSEELVIDEKATEVVNAAIDNKRRICAIGTTAMRGLESAVSSNGHLNTYEGWT 285
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
N FI P Y F + +++NFHLPKSTLLM+VSAF G + KK Y+ AI +Y+FYSYGD
Sbjct: 286 NKFIFPPYDFSIANSMVTNFHLPKSTLLMMVSAFIGHDLMKKAYKEAILESYKFYSYGDA 345
Query: 354 SLL 356
L+
Sbjct: 346 MLI 348
>gi|88858512|ref|ZP_01133154.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pseudoalteromonas tunicata D2]
gi|88820129|gb|EAR29942.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pseudoalteromonas tunicata D2]
Length = 345
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 145/362 (40%), Positives = 212/362 (58%), Gaps = 22/362 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R S+RL+ ++ N I + SD+ F+ D +V
Sbjct: 1 MRVADFNFDLPDELIARFPKEERTSSRLLKMNGNSGE---IEHCVFSDIINFIGPKDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A++ G + +I + + + + R SK K G +L
Sbjct: 58 FNNTKVIPARMFGQKASG-----GKIEVLIERVLDEHRVLAHVRASKSPKAGALLIL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
++ EAT++ + GE+ + + + +G +PLPPYI RP + D Y
Sbjct: 110 --ENSAEATMVQRH--GELFELKFHGDNNVLDILENIGHMPLPPYI--DRPDNESDRKRY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF L++ L + G+++ FVTLHVGAGTF PV+ + D+H+M
Sbjct: 164 QTVYGEKPGAVAAPTAGLHFDEKLMADLKAKGVEMAFVTLHVGAGTFQPVRAQTVDEHVM 223
Query: 241 HSEIGFIDAP--TAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFI 297
HSE +I+ P A+ K+RGGR+++VGTTS+R LE+A + G + + G T+IFI
Sbjct: 224 HSE--YIEVPDDVVAAIVKTKARGGRVIAVGTTSVRSLESAAKQSQGELKSYFGDTDIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+F+ +D +++NFHLP+STL+MLVSAF G E Y AI+ YRF+SYGD L
Sbjct: 282 YPGYQFQVIDAMITNFHLPESTLIMLVSAFAGQENIMNAYNVAIAEQYRFFSYGDAMFLE 341
Query: 358 QK 359
+K
Sbjct: 342 RK 343
>gi|222099065|ref|YP_002533633.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Thermotoga
neapolitana DSM 4359]
gi|221571455|gb|ACM22267.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Thermotoga
neapolitana DSM 4359]
Length = 337
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 140/358 (39%), Positives = 199/358 (55%), Gaps = 24/358 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V EFD++LPP IA PV PRD++RLMV+H I + ++ +L D +V
Sbjct: 3 MKVSEFDYELPPELIAQEPVEPRDASRLMVLHRKTKK---IEHRIFREIVEYLEPGDLLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N +KVI A+L + + I L R+ W +P + +KKG L
Sbjct: 60 LNVSKVIPARLYAKKKTGAH-----IEILLLDRLEEGIWRCLVKPGQKVKKGTELLI--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ L A +D+ G +L F +L I G PLPPYI ++ P+D Y
Sbjct: 112 --DNNLSAVCLDRSEDGTRILEFRPKNDDL---ILKKGKAPLPPYIKKEVPLDR-----Y 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GSVAAPTAGLHFT L+ +L G++ + LHVG GTF PVKVE+ + H M
Sbjct: 162 QTVYAKENGSVAAPTAGLHFTPELIEKLKEKGVEFAEIVLHVGIGTFRPVKVEEVEKHRM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H E + + + K +G R+V+VGTT++R LET A + ++G T++FI P
Sbjct: 222 HEEYYRVPREAVRKIRETKEKGKRVVAVGTTTVRTLETIARLPEQ--EEYAGKTDLFIYP 279
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+ VD L++NFHLP+STLLMLV+AF G + + Y+ A+ YRF+S+GD L+
Sbjct: 280 PFEFKMVDALITNFHLPRSTLLMLVAAFAGKDFIMEAYREAVKRRYRFFSFGDAMLIL 337
>gi|76262724|gb|ABA41450.1| S-adenosylmethionine: tRNA-ribosyltransferase isomerase
[Pseudomonas syringae pv. maculicola]
gi|330957505|gb|EGH57765.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. maculicola str. ES4326]
Length = 354
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 149/355 (41%), Positives = 206/355 (58%), Gaps = 24/355 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R S+RL+ L P ++ +DL + D +
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLL----TLDGPTGALAHRQFTDLLEHVRLGDLM 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 57 VFNNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRASKSPKPGSSILI-- 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSIS-GIELERQISLVGTIPLPPYIARKRPIDARDYV 178
DG EA ++ + +T +F + E+ + VG +PLPPYI RP + D
Sbjct: 110 -DGGG--EAEMVARHDT-----LFELRFAEEVLPLLDRVGHMPLPPYI--DRPDEGADRE 159
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF PV+VE +DH
Sbjct: 160 RYQTVYAERAGAVAAPTAGLHFDQPLLDAIAAKGVETAFVTLHVGAGTFQPVRVEQIEDH 219
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE + A+ + ++RGGR+++VGTTS+R LE+A DG++ P+SG T+IFI
Sbjct: 220 HMHSEWLEVSQSVVDAVAACRARGGRVIAVGTTSVRSLESA-ARDGVLKPFSGDTDIFIY 278
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
PG F VD L++NFHLP+STLLMLVSAF G ET Y A+ H YRF+SYGD
Sbjct: 279 PGRPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAVEHGYRFFSYGDA 333
>gi|330965894|gb|EGH66154.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. actinidiae str. M302091]
Length = 354
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 151/354 (42%), Positives = 205/354 (57%), Gaps = 22/354 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R S+RL+ L P ++ +DL L S D +
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLL----TLDGPTGALAHRQFTDLLEHLRSGDLM 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 57 VFNNTRVIPARLFGQKAS-----GGKLEILVERVLDGHRVLAHVRASKSPKPGSSILI-- 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
DG EA ++ + + L F+ + L + VG +PLPPYI RP + D
Sbjct: 110 -DGGG--EAEMVARHDA-LFELRFAEEVLPL---LDRVGHMPLPPYI--DRPDEGADRER 160
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ G+VAAPTAGLHF L+ + + G++ FVTLHVGAGTF PV+VE +DH
Sbjct: 161 YQTVYAQRAGAVAAPTAGLHFDQPLMEAIAAKGVETAFVTLHVGAGTFQPVRVEQIEDHH 220
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE + A+ + ++RGGR+++VGTTS+R LE+A DG + P+SG T+IFI P
Sbjct: 221 MHSEWLEVSQDVVDAVAACRARGGRVIAVGTTSVRSLESA-ARDGHLKPFSGDTDIFIYP 279
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
G F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+SYGD
Sbjct: 280 GRPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFSYGDA 333
>gi|113969723|ref|YP_733516.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
sp. MR-4]
gi|123130559|sp|Q0HKF8|QUEA_SHESM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|113884407|gb|ABI38459.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Shewanella
sp. MR-4]
Length = 345
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 144/361 (39%), Positives = 206/361 (57%), Gaps = 20/361 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R+++RL+ + N ++D +DL +N D +V
Sbjct: 1 MRVTDFSFDLPDELIARYPMAQRNASRLLTLDGNTGT---LADKQFTDLLGMINPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK K I+H
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERMLDDKRILAHVRSSKSPKVDSIIHL--- 109
Query: 121 DGQSRLE-ATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
DG ++ A D E+L S + + + VG +PLPPYI RP + D
Sbjct: 110 DGGYEMKMAARHDALFELELL-----SDLTILEVLEAVGHMPLPPYI--DRPDEDADKER 162
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y + G+VAAPTAGLHF +L L + G+ + FVTLHVGAGTF PV+V++ +H
Sbjct: 163 YQTVYNQNPGAVAAPTAGLHFDDAMLDALKAKGVNIAFVTLHVGAGTFQPVRVDNVLEHK 222
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFIT 298
MHSE + + K+ G R+V+VGTTS+R LE+A +G + +SG T+IFI
Sbjct: 223 MHSEWANVPQDVVDLIAQTKAAGKRVVAVGTTSVRSLESAARASEGELKAFSGDTDIFIY 282
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY+F+ VD +++NFHLP+STL+MLVSAF G + YQHAI+ YRF+SYGD + +
Sbjct: 283 PGYQFQIVDAMITNFHLPESTLIMLVSAFAGFDHVMAAYQHAITQKYRFFSYGDAMFVTK 342
Query: 359 K 359
K
Sbjct: 343 K 343
>gi|26987568|ref|NP_742993.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
putida KT2440]
gi|37999650|sp|Q88PL8|QUEA_PSEPK RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|24982243|gb|AAN66457.1|AE016275_2 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
putida KT2440]
Length = 349
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 148/360 (41%), Positives = 207/360 (57%), Gaps = 28/360 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R +RL+V L P ++ DL +L D +
Sbjct: 1 MRVADFSFELPDSLIARHPLAERHGSRLLV----LDGPTGALAHRQFPDLLDYLRPGDLM 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + ++ + + + + R SK K G ++
Sbjct: 57 VFNNTRVIPARLFGQKAS-----GGKLEVLVERVLDSHRVLAHVRASKAPKVGAVI-LID 110
Query: 120 QDGQSRLEA---TVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
G++ + A T+ + T E+L + L+R VG +PLPPYI RP + D
Sbjct: 111 GGGEAEMVARHDTLFELRFTEEVLPL-------LDR----VGHMPLPPYI--DRPDEGAD 157
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YA+ G+VAAPTAGLHF LL ++ G++ FVTLHVGAGTF PV+V+ +
Sbjct: 158 RERYQTVYAQRAGAVAAPTAGLHFDEALLEKIADKGVERAFVTLHVGAGTFQPVRVDKIE 217
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
DH MH E + A+ + ++RGGR+++VGTTS+R LE+A DG++ +SG T+IF
Sbjct: 218 DHHMHKEWLEVGQDVVDAIEACRARGGRVIAVGTTSVRSLESA-ARDGVLKAFSGDTDIF 276
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PG F VD L++NFHLP+STLLMLVSAF G ET Y A+ H YRF+SYGD +
Sbjct: 277 IYPGRPFHVVDCLVTNFHLPESTLLMLVSAFAGYPETMAAYAAAVEHGYRFFSYGDAMFI 336
>gi|291295061|ref|YP_003506459.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Meiothermus
ruber DSM 1279]
gi|290470020|gb|ADD27439.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Meiothermus
ruber DSM 1279]
Length = 338
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 152/361 (42%), Positives = 206/361 (57%), Gaps = 27/361 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++FD+ LPP IA PRD++RLMV+ I+ + DLP +L + D +V
Sbjct: 1 MNLEDFDYHLPPELIAQSGAEPRDASRLMVIDRQTGQ---ITHRIFRDLPQYLRAGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS---WSVYARPSKVIKKGDILHF 117
N +KVI A R N + L +R P+ W +P++ K G L F
Sbjct: 58 LNQSKVIPA-----RTFATNPHGTGLEVLL-VREIPSGEGLWEALLKPARRAKVGSRLTF 111
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
DG L ATV G LL FS + E + +G +PLPPYI + D
Sbjct: 112 --PDG---LFATVEAIEADGTRLLRFSGNVWE---HLENIGKMPLPPYIQ-----ASVDP 158
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YAK GSVAAPTAGLHFT LL R+ +G+ + +VTLHVG GTF PV +D D
Sbjct: 159 ARYQTVYAKTPGSVAAPTAGLHFTPELLDRVRGLGVDIQYVTLHVGPGTFKPVH-DDPDR 217
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWSGFTNIF 296
H+MH E + TA+A+N ++ G R+++VGTT +R LETA + E G + +G T +F
Sbjct: 218 HVMHLEPYEVSPQTAEAVNRARAEGRRVIAVGTTVVRTLETAYSAELGGVQAGAGETQLF 277
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PG+++ +D L++NFHLPKSTLLMLVSAF G K+ YQ A++ YRFYS GD L+
Sbjct: 278 IRPGFKYNVIDTLITNFHLPKSTLLMLVSAFMGHGLMKQAYQTAVAERYRFYSLGDAMLI 337
Query: 357 F 357
Sbjct: 338 L 338
>gi|253995831|ref|YP_003047895.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylotenera mobilis JLW8]
gi|253982510|gb|ACT47368.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylotenera mobilis JLW8]
Length = 347
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 142/356 (39%), Positives = 204/356 (57%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++FDF LP S IA P R ++R++ ++ S ++D D P F + D ++
Sbjct: 4 MKTQDFDFYLPSSLIAQHPSSERTASRMLYLNSTASK---LTDKQFLDFPDFFKAGDLLI 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + N + + ++ N+ + R S+ K G + S
Sbjct: 61 FNDTRVIKARLFGNKHSGGN-----VEVLIERVINQNTAYAHVRASRSPKVGSRI-TLSD 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A D + E+ + S EL Q G +PLPPYI D Y
Sbjct: 115 AFDVEVTARHDDLF---ELRFLSEDSVFELLEQH---GALPLPPYITHGAT--DHDEERY 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK G+VAAPTAGLHF + +L +L + G+ + +VTLHVGAGTF PV+V+ DH M
Sbjct: 167 QTVYAKHLGAVAAPTAGLHFNTEILEQLKAKGVNIAYVTLHVGAGTFQPVRVDSVADHKM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE+ + T + + K+ GG + ++GTT++R LE+A +G + G T+IFITPG
Sbjct: 227 HSELFHVPTETVALIEATKANGGIVTAIGTTAMRALESA-ARNGTLAAGEGDTDIFITPG 285
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF VD L++NFHLPKSTLLMLVSAF G + +K Y HA++ YRF+SYGD L+
Sbjct: 286 YRFNVVDRLLTNFHLPKSTLLMLVSAFAGTDNIRKAYAHAVAGEYRFFSYGDAMLI 341
>gi|330504700|ref|YP_004381569.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
mendocina NK-01]
gi|328918986|gb|AEB59817.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
mendocina NK-01]
Length = 347
Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 153/359 (42%), Positives = 205/359 (57%), Gaps = 32/359 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F FDLP S IA P+ R ++RL+ L P H +D+ L D +
Sbjct: 1 MRVADFHFDLPESLIARHPLAERRASRLL----QLDGPSGALRHGQFTDVLEQLRPGDLM 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + ++ + + + + R SK K G
Sbjct: 57 VFNNTRVIPARLFGQKASG-----GKLEILVERVLDQHRVLAHVRSSKSPKPGS--QILI 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIE-----LERQISLVGTIPLPPYIARKRPIDA 174
+ G EA ++ + N +F + E LER VG +PLPPYI RP +
Sbjct: 110 EGGG---EAEMVARHNA-----LFELRFAEPVLALLER----VGHMPLPPYI--DRPDEE 155
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D YQT YA+ G+VAAPTAGLHF LL+ + + G++ FVTLHVGAGTF PV+VE
Sbjct: 156 ADRERYQTVYAEKAGAVAAPTAGLHFDDELLAAIRAKGVETAFVTLHVGAGTFQPVRVER 215
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
+DH MHSE + A+ + ++RGGR+V+VGTTS+R LETA DG + P+SG T+
Sbjct: 216 IEDHHMHSEWLEVSQDVVDAVAACRARGGRVVAVGTTSVRSLETA-ARDGELKPFSGDTD 274
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFI PG F VD L++NFHLP+STLLMLVSAF G ET Y+ A++ YRF+SYGD
Sbjct: 275 IFIYPGRPFHVVDALVTNFHLPESTLLMLVSAFAGYSETMAAYREAVAQGYRFFSYGDA 333
>gi|152987013|ref|YP_001346673.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
aeruginosa PA7]
gi|166216738|sp|A6V0T8|QUEA_PSEA7 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|150962171|gb|ABR84196.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
aeruginosa PA7]
Length = 347
Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 155/366 (42%), Positives = 208/366 (56%), Gaps = 40/366 (10%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVH-PNLSCPLVISDHLVSDLPAFLNSNDAI 59
M V +F FDLP + IA P+ R ++RL+ + P S ++ +DL +L D +
Sbjct: 1 MRVADFHFDLPEALIARHPLPERRASRLLALDGPTGS----LAHKQFADLLDYLRPGDLM 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVS----PNSWSVYARPSKVIKKGDIL 115
VFNNT+VI A+L G +KE L + V + + R SK K G
Sbjct: 57 VFNNTRVIPARLFG---------QKESGGKLEVLVERVLDQHRVLAHVRASKAPKPG--T 105
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIE-----LERQISLVGTIPLPPYIARKR 170
+ G S A ++ + + +F ++ E LER VG +PLPPYI R
Sbjct: 106 RILVEGGGS---AEMLQRHDA-----LFELAFAEPVLPLLER----VGHMPLPPYI--DR 151
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
P DA D YQT YA+ G+VAAPTAGLHF LL + + G+ FVTLHVGAGTF PV
Sbjct: 152 PDDAADRERYQTVYAQRAGAVAAPTAGLHFDEALLEAIRAKGVDTAFVTLHVGAGTFQPV 211
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWS 290
+VE +DH+MH E + A+ + ++RGGR+V+VGTTS+R LE+A DG + P+S
Sbjct: 212 RVERIEDHVMHREWLEVGQDVVDAVAACRARGGRVVAVGTTSVRSLESA-ARDGELKPFS 270
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G T+IFI PG F VD L++NFHLP+STLLMLVSAF G ET Y A+ YRF+SY
Sbjct: 271 GDTDIFIYPGRPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAVEQGYRFFSY 330
Query: 351 GDTSLL 356
GD +
Sbjct: 331 GDAMFI 336
>gi|257452581|ref|ZP_05617880.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. 3_1_5R]
gi|257466440|ref|ZP_05630751.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium gonidiaformans ATCC 25563]
gi|315917596|ref|ZP_07913836.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium gonidiaformans ATCC 25563]
gi|317059121|ref|ZP_07923606.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. 3_1_5R]
gi|313684797|gb|EFS21632.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. 3_1_5R]
gi|313691471|gb|EFS28306.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium gonidiaformans ATCC 25563]
Length = 343
Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 146/357 (40%), Positives = 201/357 (56%), Gaps = 24/357 (6%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
++D+ LP I P PRD A+L++V+ + I D D+ +L D +V N+T
Sbjct: 7 DYDYHLPEELIGQTPREPRDHAKLLLVNRDTKT---IEDKYFYDILDYLQKGDVLVRNST 63
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHM----RVSPNSWSVYARPSKVIKKGDILHFFSQ 120
KVI A+L G +KE L + R ++W +P+K +K G ++
Sbjct: 64 KVIPARLYG---------QKETGGILEVLLVKRKDLDTWECLLKPAKKLKLGQKIYI--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
S L A +++ G +L FS G E + +GT+PLPPYI K D Y
Sbjct: 112 GPNSELVAELLEIQEDGNRILKFSYEG-SFEENLDRLGTMPLPPYIVEK----LEDQEMY 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK SVAAPTAGLHFT LL ++ GI++ + L VG GTF PV+ ED DH M
Sbjct: 167 QTVYAKRGESVAAPTAGLHFTEELLQKIQEKGIEIVDIYLEVGLGTFRPVQTEDVLDHKM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E+ I AQ +N K+ G RI+SVGTT+ R LE++ E+GI+ T IFI PG
Sbjct: 227 HEELFEIPEEAAQKINQAKAEGRRIISVGTTTTRALESSVDENGILLAQKKNTGIFIYPG 286
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ VD L++NFHLPKSTLLMLVSAF E ++YQHA+ Y F+S+GD ++
Sbjct: 287 YQFQIVDALITNFHLPKSTLLMLVSAFSEREFILEIYQHAVEEKYHFFSFGDAMFIY 343
>gi|258512074|ref|YP_003185508.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
DSM 446]
gi|257478800|gb|ACV59119.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
DSM 446]
Length = 355
Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 146/365 (40%), Positives = 216/365 (59%), Gaps = 25/365 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FD++LP IA +P+ RD +RL+V V+ + +++ LN D +V
Sbjct: 1 MRVEDFDYELPEHLIAQQPLPERDQSRLLV---VDPVDRVVRHRIFAEIVEELNPGDVLV 57
Query: 61 FNNTKVITAQLNGVR---FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
N+++V+ A+L+ + H+ E+ + PN+W ARP+K ++ G L
Sbjct: 58 MNDSRVLPARLHAFKPDTGGHV-----ELLLVRPVDDQPNTWQCLARPAKRVRAGHRLVV 112
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSI--SGIELERQISLVGTIPLPPYIARKRPIDAR 175
DG R+E V+ + + G L+ F S I++ ++ G +PLPPYI K
Sbjct: 113 GEGDG--RVEMEVVGEEDEGIRLVRFHTNESVIDVAHRL---GEMPLPPYIHEK----LE 163
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT YAK GSVAAPTAGLHFT LL +L G+++ VTLHVG GTF PV+VE+
Sbjct: 164 DQERYQTVYAKRVGSVAAPTAGLHFTERLLQKLRDKGVQLCHVTLHVGIGTFRPVQVENV 223
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
++H MHSE + TA+ +N KS G +++VGTT+LR LE A + G++ G T+I
Sbjct: 224 EEHRMHSEWYEVSPETAEMVNQAKSEGRPVIAVGTTALRTLE-AAGQSGVLEAKQGETDI 282
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PG++F +D L++NFHLPKSTL MLV A G + K +Y+ A+ +YRF+S+GD
Sbjct: 283 FIYPGFKFHIMDGLITNFHLPKSTLFMLVCAIMGTDYAKAVYREAVERSYRFFSFGDA-- 340
Query: 356 LFQKR 360
+F KR
Sbjct: 341 MFIKR 345
>gi|118497819|ref|YP_898869.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. novicida U112]
gi|194323792|ref|ZP_03057568.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. novicida FTE]
gi|171472965|sp|A0Q7A0|QUEA_FRATN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|118423725|gb|ABK90115.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase
[Francisella novicida U112]
gi|194322156|gb|EDX19638.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. novicida FTE]
Length = 338
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 135/357 (37%), Positives = 212/357 (59%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LP IA P+ RD++RL+ ++ I+DH +D F++ D +V
Sbjct: 1 MKTDDFDYKLPEELIASYPLENRDASRLLKLNKQTGE---IADHKFTDFIDFISPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV+ A+L G + ++ + +P + + + ++ G ++
Sbjct: 58 FNNSKVMLARLYGSKTTG-----AKLEYLIERIKNPKLFETHIKANRSPAIGSEIYV--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ L A V+DK G + L+ ++ + + G IPLPPY+ KR + D Y
Sbjct: 110 --EDTL-AKVLDK--DGGMYLLEIQGDKDIYQLMEEFGHIPLPPYM--KRDDEEFDAERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GSVAAPTAGLHF+ L+ ++ + G+ + ++TLHVG+GTF PV+V+D + H M
Sbjct: 163 QTVYAQDLGSVAAPTAGLHFSKELMQQIKNKGVDIAYITLHVGSGTFKPVQVDDVESHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E+ + Q + K GGR++++GTTS+R LETA ++G I P+ G T+IF+ PG
Sbjct: 223 HAEVISVPVEVCQKIRQTKENGGRVIAIGTTSVRSLETA-GQNGQIEPYQGETDIFLYPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F VD +++NFHLPKSTL+MLVSAF E+ K Y+HAI+ YRF+SYGD ++
Sbjct: 282 KKFNVVDAMITNFHLPKSTLIMLVSAFADKEKIIKAYEHAIAERYRFFSYGDAMFIY 338
>gi|91774778|ref|YP_544534.1| S-adenosylmethionine [Methylobacillus flagellatus KT]
gi|91708765|gb|ABE48693.1| S-adenosylmethionine [Methylobacillus flagellatus KT]
Length = 344
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 138/356 (38%), Positives = 206/356 (57%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P R +RL+ + N ++D L DLP + D +
Sbjct: 3 MRTNDFDFFLPDELIAQFPAKERRGSRLLHLDGNTGQ---VNDRLFLDLPDLVEPGDLFI 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L+G + +I + + P + R S+ K G IL
Sbjct: 60 FNDTRVIKARLHGEKLS-----GGKIEVLVERVLGPFEALAHIRASRAPKPGSILRI--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
EA ++ + + ++ + + + L + G++PLPPYI ++ D Y
Sbjct: 112 --ADAFEAEMLGRQD--DLFHLRILGDLPLLDLLEQHGSLPLPPYITHD--AESTDEERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF + +L L +G+ + +VTLHVGAGTF PV+V++ +H M
Sbjct: 166 QTVYAREPGAVAAPTAGLHFDNAMLDGLKRLGVNIAYVTLHVGAGTFQPVRVDNISEHKM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE+ + T ++ ++ GG++ +VGTT+LR LE+A + G + G T+IFITPG
Sbjct: 226 HSELYSVPQHTVDMIHQTRATGGKVTAVGTTALRALESA-AQPGTLQAGQGETDIFITPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF+ V+ L++NFHLPKSTLLMLVSAF G+E + Y HA++ YRF+SYGD L+
Sbjct: 285 YRFQVVERLLTNFHLPKSTLLMLVSAFAGVEHIRNAYAHAVTARYRFFSYGDAMLI 340
>gi|258645434|ref|ZP_05732903.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Dialister
invisus DSM 15470]
gi|260402785|gb|EEW96332.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Dialister
invisus DSM 15470]
Length = 339
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 138/356 (38%), Positives = 200/356 (56%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++F++ LP IA +P PRDS RL++V D+ + D V
Sbjct: 1 MKLEDFNYVLPKELIAQQPAEPRDSCRLLMVDKKTG---EWQHRRFRDILDEIRPGDVFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L G R + + L + W + P + G + F
Sbjct: 58 FNNTKVIPARLFGRRKGTGGK----VEALLLTPKGNDVWEILVNPGRKALPGQEIEF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
TVIDK G L+ F SG + + + +G +P PPYI +K ++ +D +Y
Sbjct: 111 --SENFSCTVIDKTEFGGRLVKFHYSG-DFDNWLDQLGEMPTPPYIHKK--LENKD--EY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ G ++ FVTLHVG GTF PV E+ +DH M
Sbjct: 164 QTVYAKFKGSAAAPTAGLHFTPELLEKMKDKGAELLFVTLHVGIGTFRPVAEENIEDHEM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I+ TAQ +N K G RI++VGTTS+R LE+A + G + S +T ++I PG
Sbjct: 224 HREWYTIEKETAQKVNEAKEEGRRIIAVGTTSVRTLESA-GQTGRVEAGSSWTQLYIYPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+++ VD +++NFHLP+STL+M++++F G E Y+ A+ YRF+S+GD L
Sbjct: 283 YQWQVVDAIVTNFHLPESTLIMMMASFAGREHILAAYEEAVRQKYRFFSFGDAMFL 338
>gi|86140645|ref|ZP_01059204.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Leeuwenhoekiella blandensis MED217]
gi|85832587|gb|EAQ51036.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Leeuwenhoekiella blandensis MED217]
Length = 351
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 144/363 (39%), Positives = 200/363 (55%), Gaps = 22/363 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F+FDLP +A P RD ARLMV++ I L DL + ND +V
Sbjct: 3 MKLSHFNFDLPKELLAEYPAENRDEARLMVLNRKTQT---IEHKLFKDLIDYFEPNDVMV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREK-----EISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
NNTKV A+L G +EK E+ + W V P++ I+ G+ L
Sbjct: 60 LNNTKVFPARLYG-------NKEKTGARIEVFLLRELNSETRLWDVLVDPARKIRIGNKL 112
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPID 173
+F D +S L A VID + L F G E +++ +G PLP YI KR ++
Sbjct: 113 YF--GDDES-LVAEVIDNTTSRGRTLRFLYDGSYQEFRNKLTELGETPLPKYI--KRDVE 167
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT +AK +G+VAAPTAGLHF+ +LL RL G+ VTLHVG GTF PV+VE
Sbjct: 168 PEDAERYQTIFAKNEGAVAAPTAGLHFSKHLLKRLEIKGLNFAEVTLHVGLGTFSPVEVE 227
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
D H M SE +ID +N ++ +VGTT +R LE++ + + +N +SG+T
Sbjct: 228 DLSKHKMDSEEAYIDRTATSTINKAIGENRKVCAVGTTVMRALESSVSSNRTLNEFSGWT 287
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
N FI P Y F + +++NFH PKSTL+M+VSAF G + K+ Y+ A+ Y+FYSYGD
Sbjct: 288 NKFIFPPYDFSIANCMITNFHTPKSTLMMMVSAFAGHDFMKEAYEQAVKEKYKFYSYGDA 347
Query: 354 SLL 356
L+
Sbjct: 348 MLI 350
>gi|295135351|ref|YP_003586027.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Zunongwangia profunda SM-A87]
gi|294983366|gb|ADF53831.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Zunongwangia profunda SM-A87]
Length = 351
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 141/364 (38%), Positives = 199/364 (54%), Gaps = 22/364 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F+F+LPP +A P RD ARLMV++ I DL + + D +V
Sbjct: 3 MKLSNFNFELPPELLAEYPAENRDEARLMVLNRKEQT---IEHKQFKDLIDYFDPEDVMV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREK-----EISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
NNTKV A+L G +EK E+ + W V P++ I+ G+ L
Sbjct: 60 LNNTKVFPARLYG-------NKEKTGARIEVFLLRELNAETKLWDVLVDPARKIRIGNKL 112
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPID 173
+F D +S L A VID + L F G + R++ +G PLP YI KR +
Sbjct: 113 YF--GDDES-LVAEVIDNTTSRGRTLRFLYDGSYEDFRRKLKELGETPLPKYI--KRDVQ 167
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT YAK +G+VAAPTAGLHF+ +LL RL G+ VTLHVG GTF PV+VE
Sbjct: 168 PEDQERYQTIYAKEEGAVAAPTAGLHFSKHLLKRLEIKGVNFAEVTLHVGLGTFSPVEVE 227
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
D H M SE F+ +N K+ ++ +VGTT +R+LE++ + + +N + G+T
Sbjct: 228 DLSKHKMDSEEAFVKGDAVHTINKAKTEKRKVCAVGTTVMRVLESSVSSNQTLNEFGGWT 287
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
N FI P Y F + +++NFH PKSTLLM++SAF G + + Y+ A+ YRFY+YGD
Sbjct: 288 NKFIFPPYDFSIANCMVTNFHTPKSTLLMMISAFAGHDFMMRAYEEAVKEKYRFYTYGDA 347
Query: 354 SLLF 357
L+
Sbjct: 348 MLIL 351
>gi|119468103|ref|ZP_01611229.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein ) [Alteromonadales bacterium TW-7]
gi|119448096|gb|EAW29360.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein ) [Alteromonadales bacterium TW-7]
Length = 343
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 149/363 (41%), Positives = 214/363 (58%), Gaps = 24/363 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAI 59
M V +F FDLP IA P R S+RL+ +L P IS + SD+ +N ND +
Sbjct: 1 MRVADFSFDLPDELIARFPKKDRTSSRLL----SLDGPTGEISHKVFSDILELVNENDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
+FNNT+VI A++ G + ++ + + + + R SK +K G+ +
Sbjct: 57 IFNNTRVIPARMFGQKASG-----GKVEVLVERVLDEHRVLAHVRASKSLKPGNEVIL-- 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ + +AT+I + +T L F S L+ ++ +G +PLPPYI RP D D
Sbjct: 110 ---EGKAKATMIARHDT-LFELEFDHSKNVLD-TLNDIGHMPLPPYI--DRPDDEADRER 162
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y + G+VAAPTAGLHF L++ L + G+ + FVTLHVGAGTF PV+VE D+H+
Sbjct: 163 YQTVYGEKPGAVAAPTAGLHFDEPLMAALKNKGVNMAFVTLHVGAGTFQPVRVETIDEHV 222
Query: 240 MHSEIGFIDAP--TAQALNSVKSRGGRIVSVGTTSLRLLETATT-EDGIINPWSGFTNIF 296
MHSE +I+ P A+ K+ GGR+++VGTTS+R LE+A G ++ + G T+IF
Sbjct: 223 MHSE--YIEVPQDVVDAVAQTKANGGRVIAVGTTSMRSLESAAKIHGGKLDTYFGDTDIF 280
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+F VD +++NFHLP+STL+MLVSAF G + Y AI YRF+SYGD L
Sbjct: 281 IFPGYQFNVVDAMVTNFHLPESTLIMLVSAFSGQDNIMGAYNTAIEQKYRFFSYGDAMFL 340
Query: 357 FQK 359
+K
Sbjct: 341 TRK 343
>gi|145635151|ref|ZP_01790856.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae PittAA]
gi|145640168|ref|ZP_01795752.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae R3021]
gi|145267572|gb|EDK07571.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae PittAA]
gi|145274754|gb|EDK14616.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae 22.4-21]
Length = 363
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 142/364 (39%), Positives = 210/364 (57%), Gaps = 19/364 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R S RL+ ++ I SD+ ++ D ++
Sbjct: 1 MRVSDFNFDLPDELIARYPKTDRVSCRLLQLNGENG---EIFHRTFSDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + + R SK K+G L F +
Sbjct: 58 FNNTRVIPARMFGRKASG-----GKIEVLVERMLDEHRFLAHIRSSKSPKEGAEL-FLGE 111
Query: 121 D--GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
D G++ V+ ++ + S L + ++G +PLPPYI RP + D
Sbjct: 112 DKLGENNGIKAVMKARHSSLFEVELSDKSTALLDVLQIIGHMPLPPYI--DRPDEEADKE 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y+K+ G+VAAPTAGLHF NLL +L + G+ FVTLHVGAGTF PV+VE+ +DH
Sbjct: 170 CYQTVYSKVPGAVAAPTAGLHFDENLLEKLKAKGVNFEFVTLHVGAGTFQPVRVENIEDH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTED----GIINPWSGF 292
+MH+E + A+ + K G R+++VGTTS+R +E+A + E+ +I P+
Sbjct: 230 VMHAEYVEVSQEVCNAIIATKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSD 289
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + T Y+HA+ YRF+SYGD
Sbjct: 290 TSIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKHAVQEKYRFFSYGD 349
Query: 353 TSLL 356
+
Sbjct: 350 AMFI 353
>gi|114046952|ref|YP_737502.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
sp. MR-7]
gi|122944787|sp|Q0HWR0|QUEA_SHESR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|113888394|gb|ABI42445.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Shewanella
sp. MR-7]
Length = 345
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 144/361 (39%), Positives = 206/361 (57%), Gaps = 20/361 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R+++RL+ + N ++D +DL +N D +V
Sbjct: 1 MRVTDFSFDLPDELIARYPMAQRNASRLLTLDGNTGT---LADKQFTDLLGMINPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK K I+H
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERMLDDKRILAHVRSSKSPKVDSIIHL--- 109
Query: 121 DGQSRLE-ATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
DG ++ A D E+L S + + + VG +PLPPYI RP + D
Sbjct: 110 DGGYEMKMAARHDALFELELL-----SDLTILEVLEAVGHMPLPPYI--DRPDEDADKER 162
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y + G+VAAPTAGLHF +L L + G+ + FVTLHVGAGTF PV+V++ +H
Sbjct: 163 YQTVYNQNPGAVAAPTAGLHFDDAMLEALKAKGVNIAFVTLHVGAGTFQPVRVDNVLEHK 222
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFIT 298
MHSE + + K+ G R+V+VGTTS+R LE+A +G + +SG T+IFI
Sbjct: 223 MHSEWANVPQDVVDLIVQTKAAGKRVVAVGTTSVRSLESAARASEGELKAFSGDTDIFIY 282
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY+F+ VD +++NFHLP+STL+MLVSAF G + YQHAI+ YRF+SYGD + +
Sbjct: 283 PGYQFQIVDAMITNFHLPESTLIMLVSAFAGFDHVMAAYQHAITQKYRFFSYGDAMFVTK 342
Query: 359 K 359
K
Sbjct: 343 K 343
>gi|77359285|ref|YP_338860.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pseudoalteromonas haloplanktis TAC125]
gi|91207395|sp|Q3ILB9|QUEA_PSEHT RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|76874196|emb|CAI85417.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein ) [Pseudoalteromonas haloplanktis
TAC125]
Length = 343
Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 146/364 (40%), Positives = 217/364 (59%), Gaps = 26/364 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLV-SDLPAFLNSNDAI 59
M V +F FDLP IA P R S+RL+ +L P + +H V SDL +N ND +
Sbjct: 1 MRVADFSFDLPDELIARFPKQDRTSSRLL----SLDGPSGVVEHKVFSDLLELVNENDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A++ G + ++ + + + + R SK +K G+ +
Sbjct: 57 VFNNTRVIPARMFGQKASG-----GKVEVLVERVLDEHRVLAHVRASKSLKPGNEVIL-- 109
Query: 120 QDGQSRLEATVIDKWNT-GEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ + +AT++ + +T E+ S + +++ ++ +G +PLPPYI RP + D
Sbjct: 110 ---EGKAKATMVARHDTLFELEFEHSQNVLDI---LNDIGHMPLPPYI--DRPDNEADRE 161
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y + G+VAAPTAGLHF L++ L + G+++ FVTLHVGAGTF PV+V D+H
Sbjct: 162 RYQTVYGEKPGAVAAPTAGLHFDDKLMTALKNKGVQMAFVTLHVGAGTFQPVRVATVDEH 221
Query: 239 IMHSEIGFIDAP--TAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNI 295
IMHSE +I+ P A+ + K+ GGR++++GTTS+R LE+A G ++ + G T+I
Sbjct: 222 IMHSE--YIEVPDDVVAAVANTKANGGRVIAIGTTSVRSLESAAKVHGGKLDTYFGDTDI 279
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGY+F VD +++NFHLP+STL+MLVSAF G Y AI YRF+SYGD
Sbjct: 280 FIYPGYQFNVVDAMITNFHLPESTLIMLVSAFAGQNNIMGAYNTAIEQQYRFFSYGDAMF 339
Query: 356 LFQK 359
L +K
Sbjct: 340 LTRK 343
>gi|326794831|ref|YP_004312651.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Marinomonas
mediterranea MMB-1]
gi|326545595|gb|ADZ90815.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Marinomonas
mediterranea MMB-1]
Length = 353
Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 139/353 (39%), Positives = 201/353 (56%), Gaps = 16/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V ++ F+LP IA P+ R S+RL+ +H + + SD+ + + D +V
Sbjct: 1 MKVSDYHFNLPDELIARYPMPERSSSRLLQLHGQTGE---LKHGVFSDVLSLVEPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + +S + R SK K G+ L +
Sbjct: 58 FNNTRVIPARVFGQKASG-----GKVEVLVERLLSSTEILAHVRASKSPKPGNEL-YLGT 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D +A ++++ + L F +E+ + VG +PLPPYI +RP + D Y
Sbjct: 112 DRNESFKAVMVER-DANLFRLQFENPVLEV---LEKVGHMPLPPYI--ERPDEDSDQERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL +L G+ FVTLHVGAGTF PVKV+D DHIM
Sbjct: 166 QTVYNEKPGAVAAPTAGLHFDDELLEKLAEKGVDTAFVTLHVGAGTFQPVKVDDVKDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + K+ G R+++VGTTS+R LE+A ++ G I P + T+IFI PG
Sbjct: 226 HSEYAEVSQEVVDKVRQAKANGKRVIAVGTTSVRSLESA-SQSGQIEPMADDTSIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
Y F+ VD L++NFHLP+STL+ML+SAF G Y+ A+ YRF+SYGD
Sbjct: 285 YEFKTVDALVTNFHLPESTLIMLISAFAGYSNVMAAYKAAVDEKYRFFSYGDA 337
>gi|315022264|gb|EFT35292.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Riemerella
anatipestifer RA-YM]
gi|325336609|gb|ADZ12883.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Riemerella anatipestifer RA-GD]
Length = 349
Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 141/360 (39%), Positives = 200/360 (55%), Gaps = 16/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F+F+LPP +A P RD ARLMV++ I L D+ + + ND +
Sbjct: 1 MKTSDFNFNLPPELLAEHPSEHRDEARLMVLNRKNQT---IEHKLFKDVIDYFDENDLFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
FNNTKV A+L F + + +I L + ++ W V P++ I+ G+ L FF
Sbjct: 58 FNNTKVFPARL----FGNKEKTGAKIEVFLLRELDKDTRVWDVLVDPARKIRIGNKL-FF 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDARD 176
+D L A VID + L F G E ++ +G PLP YI KR ++ D
Sbjct: 113 DED--ESLVAEVIDNTTSRGRTLRFLYDGSYEEFRAKLKELGETPLPKYI--KREVEPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ +L+ RL GI VTLHVG GTF P++VED
Sbjct: 169 AERYQTIYAKKEGAVAAPTAGLHFSKHLMKRLEIKGINFAEVTLHVGLGTFNPIEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M E FID A +N RI +VGTT++R +ET+ + + ++ + G+TN F
Sbjct: 229 KHKMECEEAFIDQKNADIINKAIDEDRRICAVGTTTMRTIETSVSSNRKLSAYHGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F D +++NFH PKSTL+M+++AF G + Y+ A+ Y+FYSYGD L+
Sbjct: 289 IYPPYDFAVADSMITNFHTPKSTLIMMIAAFAGKDFVMHAYEEAVKEKYKFYSYGDAMLI 348
>gi|302036375|ref|YP_003796697.1| s-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Nitrospira defluvii]
gi|300604439|emb|CBK40771.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Nitrospira defluvii]
Length = 346
Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 144/366 (39%), Positives = 207/366 (56%), Gaps = 38/366 (10%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M++ EFDF P +A PV PRD ARL+V+ L V+DLP+ L S D +V
Sbjct: 1 MLLSEFDFPFDPVLVADHPVIPRDRARLLVLDRQGGERL---HRQVADLPSLLQSGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYA----RPSKVIK-----K 111
NNTKV+ A++ + + + + W V RP VI+
Sbjct: 58 VNNTKVMPARVP----AQVRSNGRLLDLLFVEDLGQGLWEVLIKGRFRPGAVIEFPGGGT 113
Query: 112 GDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGI-ELERQISLVGTIPLPPYIARKR 170
G+I+ +SRL TV V+ ++ + EL + GT+PLPPYI R+
Sbjct: 114 GEIVE------RSRLRTTV----------RVWGVTSVYEL---MQATGTMPLPPYIKREP 154
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
D +++ YQT +A+ +G++AAPTAGLHFT L+ L GI++ VTLHVG GTF V
Sbjct: 155 SADDQEW--YQTMFAQHEGAIAAPTAGLHFTRELVQALTGKGIELAEVTLHVGPGTFRSV 212
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWS 290
K E +DH M +E + A T + + V+ RG R+V+VGTT +R LETA I P+
Sbjct: 213 KTERIEDHRMLAERIEVSAQTVEQIRRVRERGHRVVAVGTTVVRALETAGRGGRGIEPFQ 272
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G +FITPG+ F+ +D +++NFHLP++TLLMLVSAF G++ + Y+ A++ YRFYSY
Sbjct: 273 GQAELFITPGFEFQVIDAMVTNFHLPRTTLLMLVSAFVGVQPLRAAYEEAVAERYRFYSY 332
Query: 351 GDTSLL 356
GD L+
Sbjct: 333 GDAMLI 338
>gi|300214785|gb|ADJ79201.1| S-adenosylmethionine tRNA ribosyltransferase-isomerase
[Lactobacillus salivarius CECT 5713]
Length = 347
Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 138/353 (39%), Positives = 201/353 (56%), Gaps = 17/353 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++FD+DLP S IA P+ RD +R++++ S D ++ LN DA+V
Sbjct: 6 LTTEDFDYDLPESLIAQTPLEERDQSRMLILD---SKTGEYQDDYFYNVIDQLNPGDALV 62
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+++V+ A++ GV+ + L + W +P++ K G + F
Sbjct: 63 MNDSRVMPARIYGVK----PETGGHVEVLLLNNTHGDEWETLVKPARRAKVGTKISF--- 115
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+ATV + G L+ F GI +E + +G +P PPYI K + Y
Sbjct: 116 -GDGALKATVTKELEHGGRLIEFEYDGIFME-ILDKLGEMPSPPYIKEK----LENPEMY 169
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ GS AAPTAGLHFT LL ++ G+K+ ++TLHVG GTF PV ++ +DH M
Sbjct: 170 QTVYSREVGSAAAPTAGLHFTKELLHKIEEKGVKLVYLTLHVGLGTFRPVSEKNIEDHKM 229
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + A LN V+ GGRIV+ GTTS+R LET T +G I SG+T+IFI P
Sbjct: 230 HSEFYRLTEEAAATLNEVRKNGGRIVATGTTSIRTLETIGTKYNGEIKADSGWTDIFIKP 289
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
GY ++ V ++NFHLPKSTL+MLV++F G E Y+HA+ YRF+S+GD
Sbjct: 290 GYEWKVVQAFITNFHLPKSTLVMLVASFTGRENILNAYKHAVEEKYRFFSFGD 342
>gi|319764640|ref|YP_004128577.1| s-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Alicycliphilus denitrificans BC]
gi|330826897|ref|YP_004390200.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Alicycliphilus denitrificans K601]
gi|317119201|gb|ADV01690.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Alicycliphilus denitrificans BC]
gi|329312269|gb|AEB86684.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Alicycliphilus denitrificans K601]
Length = 367
Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 147/366 (40%), Positives = 208/366 (56%), Gaps = 23/366 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF LP + IA P R S+RL+ + P SD + +LPA L D +VFN
Sbjct: 10 LSDFDFALPEALIAQHPAPVRSSSRLL---DGRAAP--PSDRIFHELPALLREGDLLVFN 64
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+V+ A++ G + R E I L + N + + SK G +H
Sbjct: 65 DTRVVKARVFGEK-ASGGRLELLIERVL----AGNEVVAHMKVSKKPMPGATVHMAGGKA 119
Query: 123 QSRLEATVIDKWNTGE-ILLVFSISGIELERQISLV---GTIPLPPYIARKR-----PID 173
+AT++ +W + L F++ G E L+ G +PLPPYI R++ P +
Sbjct: 120 AGGFDATLLSRWPDADGPLFRFALHGPAGETPWELMERHGHLPLPPYIERQQNAGHDPDE 179
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
A D YQT +A+ G+VAAPTA LHF +L+ L G++ VTLHVGAGTF PVK E
Sbjct: 180 AEDAERYQTVFARAPGAVAAPTAALHFDDAVLAALAERGVQRASVTLHVGAGTFQPVKTE 239
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
+H MHSE + T AL + R GR+V+VGTT++R LE+ +G T
Sbjct: 240 SLAEHRMHSEWYEVPLATLAALERCRMRAGRVVAVGTTTVRTLESWARSGQT----TGET 295
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFITPG++F+ V +L++NFHLPKSTL+MLVSAF G E ++Y+HAI YRF+SYGD+
Sbjct: 296 DIFITPGFQFQVVQLLVTNFHLPKSTLMMLVSAFAGYEHVMQLYRHAIEERYRFFSYGDS 355
Query: 354 SLLFQK 359
LL +K
Sbjct: 356 MLLERK 361
>gi|148269489|ref|YP_001243949.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Thermotoga
petrophila RKU-1]
gi|170288163|ref|YP_001738401.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Thermotoga
sp. RQ2]
gi|281411793|ref|YP_003345872.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Thermotoga
naphthophila RKU-10]
gi|166218754|sp|A5IJK0|QUEA_THEP1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|238688813|sp|B1L8S0|QUEA_THESQ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|147735033|gb|ABQ46373.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Thermotoga
petrophila RKU-1]
gi|170175666|gb|ACB08718.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Thermotoga
sp. RQ2]
gi|281372896|gb|ADA66458.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Thermotoga
naphthophila RKU-10]
Length = 335
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 143/358 (39%), Positives = 198/358 (55%), Gaps = 24/358 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V EFD++LP IA PV PRD++RLMV+H I + ++ +L D +V
Sbjct: 1 MKVSEFDYELPSELIAQEPVEPRDASRLMVLHRKTQR---IEHRIFREIIEYLEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N +KVI A+L + + I L R+ W RP + +KKG L +
Sbjct: 58 LNVSKVIPARLYARKKTGAS-----IEILLIERLEEGIWKCLVRPGQKVKKGTEL-VIDE 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D L A + + G +L F +R I G PLPPYI + P++ Y
Sbjct: 112 D----LSAVCLGRGEDGTRILKFQPQD---DRLIFEKGRTPLPPYIKNEVPLER-----Y 159
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GSVAAPTAGLHFT L+ +L G++ V LHVG GTF PVKVE+ + H M
Sbjct: 160 QTVYAKEEGSVAAPTAGLHFTPELIEKLKKKGVQFAEVVLHVGIGTFRPVKVEEVEKHKM 219
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H E + T + L + RG RIV+VGTT++R LET A + + G T++FI P
Sbjct: 220 HEEFYQVTKETIKKLRETRERGNRIVAVGTTTVRTLETIARLPEQ--EEYVGKTDLFIYP 277
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+ VD L++NFHLP+STLLMLV+AF G + + Y+ A+ YRF+S+GD L+
Sbjct: 278 PFEFKLVDALITNFHLPRSTLLMLVAAFAGKDFVMEAYREAVKRRYRFFSFGDAMLIL 335
>gi|254491486|ref|ZP_05104665.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Methylophaga thiooxidans DMS010]
gi|224462964|gb|EEF79234.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Methylophaga thiooxydans DMS010]
Length = 347
Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 145/356 (40%), Positives = 208/356 (58%), Gaps = 26/356 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F FDLP IA P R ++RL+ + N + D +DL L+S D +V
Sbjct: 1 MKTSDFRFDLPEELIAQYPSTDRTASRLLALDGNTGQ---VQDLNFTDLLNQLDSKDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTL-HMRVSPNSWSVYARPSKVIKKGDILHFFS 119
FNNTKVI A+L G + + E + L H RV + R SK +G L
Sbjct: 58 FNNTKVIPARLLGHKETG-GKVEVLVERVLDHERVL-----AHVRSSKSPSQGRRLQL-- 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLV---GTIPLPPYIARKRPIDARD 176
+ LE V+ + + +F + + + + + G +PLPPYI +R +D D
Sbjct: 110 ---EGSLEVEVLARHDA-----LFELRFLNTDSVVDALESYGRMPLPPYI--ERDVDKAD 159
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YA+ G+VAAPTAGLHF LL+++ +GI+ +TLHVGAGTF PV+V+D
Sbjct: 160 LERYQTVYAQHVGAVAAPTAGLHFDQALLAQIKEMGIETAELTLHVGAGTFQPVRVDDIR 219
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H MHSE+ + Q + + ++RGGR+++VGTTS+R LE+A ++ G I+P+ G T+IF
Sbjct: 220 SHQMHSEVIEVSEQVCQQVKAARARGGRVIAVGTTSVRALESA-SQSGEISPFEGETDIF 278
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
I PGY+F++VD +++NFHL +STLLMLVSAF YQHA+ YRF+SYGD
Sbjct: 279 IYPGYQFKSVDAMVTNFHLSESTLLMLVSAFASRSHILNAYQHAVEQRYRFFSYGD 334
>gi|110833361|ref|YP_692220.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Alcanivorax
borkumensis SK2]
gi|122959653|sp|Q0VSA0|QUEA_ALCBS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|110646472|emb|CAL15948.1| S-adenosylmethionine:tRNAribosyltransferase-isom e rase
[Alcanivorax borkumensis SK2]
Length = 359
Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 148/359 (41%), Positives = 203/359 (56%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDF+LP IA P R ARL+ L+C + DL + ++ D ++
Sbjct: 1 MNVDDFDFELPDRLIARHPPAQRRDARLLA----LTCD-ALEHQQFPDLLSHVHPGDLLI 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + ++ + V + + R SK K G L F
Sbjct: 56 FNDTRVIPARLFGQK-----ESGGKVEVLIERVVDDHEALAHVRASKSPKPGSWLEF--- 107
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQIS---LVGTIPLPPYIARKRPIDARDY 177
+ A V + +L FS+ G + +S L+G +PLPPYI RP + D
Sbjct: 108 --AKGIRAQVTGRRGA-LFILHFSLPGNGCDTLLSALELIGHVPLPPYI--DRPDEDGDM 162
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YA+ G+VAAPTAGLHF +L+ L G+ + FVTLHVGAGTF PV+V+ +D
Sbjct: 163 ERYQTVYAREPGAVAAPTAGLHFDDAMLAALEQRGVDIGFVTLHVGAGTFQPVRVDKVED 222
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MHSE I + + +RGGR+V+VGTT+LR LE A ++ G ++ G T+IFI
Sbjct: 223 HHMHSERYQIPGSLVEQVAQAHARGGRVVAVGTTALRALE-AASQSGGLHAGQGETDIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGYRFR VD L++NFHLPKSTLLML+SAF G + Y+ AI YRF+SYGD +
Sbjct: 282 FPGYRFRLVDALVTNFHLPKSTLLMLISAFAGRDRIMGAYRAAIEAQYRFFSYGDAMFI 340
>gi|150019970|ref|YP_001305324.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Thermosipho
melanesiensis BI429]
gi|166218753|sp|A6LJ38|QUEA_THEM4 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|149792491|gb|ABR29939.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Thermosipho melanesiensis BI429]
Length = 334
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 143/359 (39%), Positives = 207/359 (57%), Gaps = 27/359 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+ LP IA +PV PRD++RLMV++ I + ++ +L+ D +V
Sbjct: 1 MKLSDFDYYLPEELIAQKPVEPRDASRLMVLNRKEKK---IEHKIFRNIVEYLHEGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRRE--KEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N TKVI A++ G R+E +I L ++S N W +P +KKG ++F
Sbjct: 58 RNVTKVIPARIYG-------RKETGAKIEVLLLEKISENVWEALVKPGSKVKKGTKIYF- 109
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
D +S +D + G +L F+I+ E ++ +G PLPPY+ K +
Sbjct: 110 --DDESY--CVCLDWGDEGSRILEFNIT----EEELFKLGEAPLPPYVKNKVSFER---- 157
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y++ GSVAAPTAGLHFT +LL +L G++ + LHVG GTF PVKVE+ +H
Sbjct: 158 -YQTIYSRETGSVAAPTAGLHFTEDLLKKLEEKGVEFADLVLHVGLGTFRPVKVENITEH 216
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE ++ T + + K GGRIV+VGTTS+R LET + + G T+IFI
Sbjct: 217 KMHSESYYVPNETVKKIFETKKNGGRIVAVGTTSVRTLETIVRLER-KESYHGKTDIFIY 275
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
P + F+ VD L++NFHLPKSTLLMLVSAF G E + Y A+ YRF+S+G+ ++
Sbjct: 276 PPFEFKLVDALITNFHLPKSTLLMLVSAFAGREFIMEAYNIAVKMKYRFFSFGNACFIY 334
>gi|328472615|gb|EGF43478.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
parahaemolyticus 10329]
Length = 350
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 147/370 (39%), Positives = 214/370 (57%), Gaps = 33/370 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N + D +D+ + + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQPERTASRLLQMDGNTG---ELIDGTFTDVLNQVQAGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCH------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
FNNT+VI A++ G + + R E S H+R S + +P I G+
Sbjct: 58 FNNTRVIPARMFGRKESGGKLEVLVERMLDEKSILAHVRCSKSP-----KPGTTIIVGEN 112
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
+ S D +R +A K+N+ + +L + +G +PLPPYI RP +
Sbjct: 113 DEY-SADMVARHDALFELKFNSDKTVLEI----------LEEIGHMPLPPYI--DRPDED 159
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D YQT Y + G+VAAPTAGLHF LL ++ + G + +VTLHVGAGTF PVKV++
Sbjct: 160 ADKERYQTVYNQKPGAVAAPTAGLHFDDVLLDKIKAKGAEFAYVTLHVGAGTFQPVKVDN 219
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-----INPW 289
+DH MH+E + A+N+ K+RGGRI++VGTTS+R LE+A +D + + P+
Sbjct: 220 INDHHMHAEYVEVPQEVVDAINATKARGGRIIAVGTTSVRSLESA-AQDALKKGTELVPF 278
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
G T IFI PGY ++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ + YRF+S
Sbjct: 279 FGDTEIFIYPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYENTMNAYKHAVENKYRFFS 338
Query: 350 YGDTSLLFQK 359
YGD+ + +K
Sbjct: 339 YGDSMFIKKK 348
>gi|240949619|ref|ZP_04753954.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus minor NM305]
gi|240295877|gb|EER46553.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus minor NM305]
Length = 363
Score = 242 bits (618), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 151/378 (39%), Positives = 212/378 (56%), Gaps = 45/378 (11%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +F FDLP + IA P+ R ++RL+ ++ +D +DL L+ D +V
Sbjct: 1 MLVSDFHFDLPDNLIARYPMPDRSASRLLYLNGETGE---FADQHFTDLLEHLHEGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCH------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
FNNT+VI A+L G + I R E C H+R S K K+G
Sbjct: 58 FNNTRVIPARLYGRKISGGKVEALIERVLDEHRCLAHVRAS-----------KAPKEGTQ 106
Query: 115 LHFFSQD--GQSR-LEATVIDKWNTGEILLVFSISGIELERQISL------VGTIPLPPY 165
L F +D G+ L AT+ + +T + + E Q +L G +PLPPY
Sbjct: 107 L-IFGEDKLGEGNGLVATMAARHDT--------LFELHFESQNNLFDLLQSAGHMPLPPY 157
Query: 166 IARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAG 225
I RP + D YQT Y+K+ G+VAAPTAGLHF + +L +L G+ FVTLHVGAG
Sbjct: 158 I--DRPDEDADQERYQTVYSKVLGAVAAPTAGLHFDNTMLEKLKEKGVNTAFVTLHVGAG 215
Query: 226 TFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT----T 281
TF PV+VE+ DH MH+E + + K++G R+++VGTTS+R +E+A
Sbjct: 216 TFQPVRVENILDHKMHAEYAEVSQDVVDKILETKAKGKRVIAVGTTSVRSIESAAQAVKN 275
Query: 282 EDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAI 341
D +I P+ T+IFI PG F+ VD L++NFHLP+STL+MLVSAF G + T YQHA+
Sbjct: 276 SDTLIEPFFSDTSIFIYPGKTFKVVDALVTNFHLPESTLIMLVSAFAGYKNTMNAYQHAV 335
Query: 342 SHAYRFYSYGDTSLLFQK 359
YRF+SYGD ++ QK
Sbjct: 336 ESQYRFFSYGD-AMFIQK 352
>gi|228473602|ref|ZP_04058354.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Capnocytophaga gingivalis ATCC 33624]
gi|228274974|gb|EEK13784.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Capnocytophaga gingivalis ATCC 33624]
Length = 349
Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 143/360 (39%), Positives = 196/360 (54%), Gaps = 16/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F+F+LP +A P RD ARLMVVH I L D+ + + D V
Sbjct: 1 MKLSSFNFNLPKELLAEYPSENRDEARLMVVHRKTG---EIEHRLFKDVIEYFDDGDVFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
NNTKV A+L G H + +I L ++ W V P++ I+ G+ L F
Sbjct: 58 LNNTKVFPARLYG----HKEKTNAKIEVFLLRELNKEQRLWDVLVDPARKIRIGNKLFF- 112
Query: 119 SQDGQSRLEATVIDKWNT-GEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
D + L A VID + G L +F S ++ +G PLP YI+R P++ D
Sbjct: 113 --DPEEELVAEVIDNTTSRGRTLRFLFDGSYEGFRNKLLELGHTPLPKYISR--PVEPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ L+ RL GI +TLH+G GTF PV+VED
Sbjct: 169 EERYQTIYAKYEGAVAAPTAGLHFSKQLMKRLEIKGINFAELTLHIGLGTFNPVEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I Q +N K G R+ +VGTT +R +E++ + +NP+ G+TN F
Sbjct: 229 KHKMDSEEIIIPQEACQVVNKAKEAGKRVCAVGTTVMRAMESSVSSHNTLNPFIGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH PKSTLLM+VSAF G E Y+ A+ Y+F+SYGD L+
Sbjct: 289 IFPPYDFGVANAMITNFHTPKSTLLMMVSAFAGHELIMDAYEEAVKEKYKFFSYGDAMLI 348
>gi|89899439|ref|YP_521910.1| S-adenosylmethionine [Rhodoferax ferrireducens T118]
gi|89344176|gb|ABD68379.1| S-adenosylmethionine [Rhodoferax ferrireducens T118]
Length = 360
Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 152/369 (41%), Positives = 209/369 (56%), Gaps = 33/369 (8%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF LPP IA P R +RL+ S D + DLP+ L D +VFN
Sbjct: 14 LSDFDFHLPPELIAQHPAPERSGSRLLD-----STSATPQDRVFRDLPSLLQPGDLLVFN 68
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRV----SPNSWSVYARPSKVIKKGDILHFF 118
+T+VI A+L G EK L + V N + + R SK + G +
Sbjct: 69 DTRVINARLFG---------EKSTGGKLELLVERVLGGNQVAAHLRVSKKPEVGASVALT 119
Query: 119 SQDG-QSRLEATVIDKWNTGE-ILLVFSISGIELERQISLV---GTIPLPPYIARKRPID 173
G L AT++ +W + L F ++ + +L+ G +PLPPYI
Sbjct: 120 GAPGTHENLRATLLGRWPDAQGALFRFVLTNDAGDDPFTLMARHGHVPLPPYITHSD--S 177
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
A D YQT +AK G+VAAPTA LHF LL+ L + G++ FVTLHVGAGTF PVK E
Sbjct: 178 AEDAARYQTVFAKNPGAVAAPTAALHFDDALLAALDARGVQRAFVTLHVGAGTFQPVKTE 237
Query: 234 DTDDHIMHSEIGFIDAPTA--QALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSG 291
+ +H MHSE + D PTA QA+ ++RGGR+++VGTT++R LE+ +G
Sbjct: 238 NLAEHQMHSE--WYDVPTATQQAIADCRARGGRLIAVGTTTVRTLESWAK----TGQTTG 291
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T IFITPG+ F+ VD+L++NFHLPKS+L+MLVSAF G E +YQHA++ YRF+SYG
Sbjct: 292 DTQIFITPGFEFQLVDLLVTNFHLPKSSLMMLVSAFAGYEPVMALYQHAMAAQYRFFSYG 351
Query: 352 DTSLLFQKR 360
D LL ++R
Sbjct: 352 DAMLLARQR 360
>gi|322434368|ref|YP_004216580.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Acidobacterium sp. MP5ACTX9]
gi|321162095|gb|ADW67800.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Acidobacterium sp. MP5ACTX9]
Length = 368
Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 143/371 (38%), Positives = 213/371 (57%), Gaps = 19/371 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +FD++LP IA P R ++R++ + + + ++ D S LP L + D ++
Sbjct: 1 MLVSDFDYELPEELIAQTPPETRGASRMLRM--DRASGALVDDSFAS-LPECLKAGDLLI 57
Query: 61 FNNTKVITAQLNGVRF---------CHINRREKEISCTLHMRVSPNSWSVYARPSKVIKK 111
N+T+VI A+L GVR R E ++ + ++W RP++ ++
Sbjct: 58 LNDTRVIPARLFGVRAGLHTQHNSPAPTGRIEVLLTSQISADDEGSTWETLVRPARKVQP 117
Query: 112 GDILHFFSQDGQSR--LEATVIDKWNTGE--ILLVFSISGIELERQISLVGTIPLPPYIA 167
G+ LHF+ + S L A V+ GE + L+ + L + +G +PLPPYI
Sbjct: 118 GETLHFYDAERPSAPALTAEVLAAGEFGERTLRLIPADPQEPLTAILERIGHLPLPPYIY 177
Query: 168 R--KRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAG 225
R + P D YQT +A+ GS AAPTAGLHFT +L+ L + G++V +TLHVG G
Sbjct: 178 RPDEAPNTTADRERYQTVFAQPAGSAAAPTAGLHFTPEILAALKARGVEVQTLTLHVGLG 237
Query: 226 TFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI 285
TF PV+ E T+D +H+E + A TA+A+ ++ G RIV+VGTT R LE G
Sbjct: 238 TFQPVRAERTEDIRLHAEPYTLPAATAEAIQRAQAEGRRIVAVGTTVTRTLEHCAA-IGN 296
Query: 286 INPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAY 345
+ P SG T++F++PG+ FR V L++NFHLP+STL+MLVSAF G E T Y HA+ Y
Sbjct: 297 LAPHSGTTSLFLSPGHEFRVVGGLLTNFHLPQSTLVMLVSAFAGREATLAAYAHAVRERY 356
Query: 346 RFYSYGDTSLL 356
RF+SYGD L+
Sbjct: 357 RFFSYGDCMLI 367
>gi|237747214|ref|ZP_04577694.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase [Oxalobacter
formigenes HOxBLS]
gi|229378565|gb|EEO28656.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase [Oxalobacter
formigenes HOxBLS]
Length = 343
Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 149/354 (42%), Positives = 204/354 (57%), Gaps = 22/354 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LP IA P+ R ++RL++ ++D L +L+ +D +VFN
Sbjct: 4 LSDFDFELPEELIAQFPLEKRSASRLLIARDE-----KLADSRFDHLIDYLDRDDLLVFN 58
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NTKV+ A RF + +I + + + R SK K+ +L
Sbjct: 59 NTKVLKA-----RFFGAKKTGGKIEILIERILDNRTALAKIRASKSPKENSLLLI----- 108
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
LE +V K GE ++ S +L + G +PLPPYIAR DA D YQT
Sbjct: 109 DDELEVSV--KGREGEFYVLHFPS--DLFSILDHHGHLPLPPYIAR--TADAYDEKRYQT 162
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
+AK G+VAAPTAGLHF L+ +L GI+ ++TLHVGAGTF PV+ E+ D+H MH+
Sbjct: 163 VFAKEPGAVAAPTAGLHFDEELMGKLEEKGIRSAYLTLHVGAGTFQPVRSENLDEHKMHT 222
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I T A+ + + ++V+VGTTSLR LE+A ++ G + S T++FITPGYR
Sbjct: 223 EWYTIPQETVYAVKTARENKRKVVAVGTTSLRALESA-SQTGQLVAGSNETSLFITPGYR 281
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
F VD L++NFHLPKSTLLMLVSAF G E +K Y HAIS YRF+SYGD LL
Sbjct: 282 FNTVDWLVTNFHLPKSTLLMLVSAFAGYELIRKAYAHAISQQYRFFSYGDAMLL 335
>gi|308050488|ref|YP_003914054.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase [Ferrimonas
balearica DSM 9799]
gi|307632678|gb|ADN76980.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase [Ferrimonas
balearica DSM 9799]
Length = 352
Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 142/357 (39%), Positives = 206/357 (57%), Gaps = 23/357 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDFDLP IA P R ++RL+ + + + D DL + D +V
Sbjct: 1 MQVADFDFDLPDELIARYPTQERTASRLLHLDGDTGA---LHDGQFPDLLELVRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L+G + +I + + + R SK K G L F
Sbjct: 58 FNNTRVIPARLHGQKAS-----GGKIEVLVERVLDSERVLAHVRSSKSPKPGTELQF--D 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQI-SLVGTIPLPPYIARKRPIDARDYVD 179
DG + AT++ + + L + G + I +G +PLPPYI RP + D
Sbjct: 111 DG---VTATMVARHDA---LFELAFHGNDTVLNILDRIGHMPLPPYI--DRPDENSDRER 162
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y + G+VAAPTAGLHF ++L+RL G++ +VTLHVGAGTF PV+V+ +DH
Sbjct: 163 YQTVYNQRPGAVAAPTAGLHFDESMLARLKEKGVETAYVTLHVGAGTFQPVRVDKVEDHH 222
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET---ATTEDG-IINPWSGFTNI 295
MHSE + + +A+ ++RGGR+++VGTTS+R LE+ A E G ++ P++ T+I
Sbjct: 223 MHSEFAEVGSDVVEAVKRTRARGGRVIAVGTTSVRSLESAARAAREHGEVLAPYAQETDI 282
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
F+ PG F VD +++NFHLP+STL+MLVSAF G + YQHA++ YRF+SYGD
Sbjct: 283 FLYPGCEFLLVDAMITNFHLPESTLIMLVSAFAGQDHVMNAYQHAVAQKYRFFSYGD 339
>gi|307129892|ref|YP_003881908.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Dickeya
dadantii 3937]
gi|306527421|gb|ADM97351.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Dickeya
dadantii 3937]
Length = 355
Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 150/362 (41%), Positives = 209/362 (57%), Gaps = 25/362 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLV-SDLPAFLNSNDAI 59
M V +F F+LP S IA P R RL+ +L P H V +DL L D +
Sbjct: 1 MRVADFSFELPESLIAHYPQAKRSGCRLL----SLDGPTGALTHGVFTDLLDKLQPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + ++ + + + R SKV K G L
Sbjct: 57 VFNNTRVIPARLFGRKVSG-----GKLEVLVERMLDDKRVLAHVRASKVPKPGTEL-LLG 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISL---VGTIPLPPYIARKRPIDARD 176
+D ++AT++ + + +F I + +++ +G +PLPPYI RP +A D
Sbjct: 111 ED--ESVKATMLARHDA-----LFEIQFDDTRDVLTILNDIGHMPLPPYI--DRPDEAAD 161
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT Y++ G+VAAPTAGLHF LL+ L G+++ FVTLHVGAGTF PV+VE +
Sbjct: 162 RELYQTVYSQRPGAVAAPTAGLHFDEPLLAALKEKGVEMAFVTLHVGAGTFQPVRVESIE 221
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTN 294
DHIMH+E + A+ + K+RG R+++VGTTS+R LE+A + II P+ G T
Sbjct: 222 DHIMHAEYTEVPQVVVDAVLACKARGNRVIAVGTTSVRSLESAAQASTGEIIAPFFGDTR 281
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PGYR+R VD L++NFHLP+STL+MLVSAF G T YQ A++ YRF+SYGD
Sbjct: 282 IFIYPGYRYRVVDALVTNFHLPESTLIMLVSAFAGYRHTMTAYQQAVAEQYRFFSYGDAM 341
Query: 355 LL 356
+
Sbjct: 342 FI 343
>gi|260222591|emb|CBA32304.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase [Curvibacter
putative symbiont of Hydra magnipapillata]
Length = 358
Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 147/362 (40%), Positives = 212/362 (58%), Gaps = 21/362 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LP + IA P R ++RL+ +S D + DLP L + D +VFN
Sbjct: 12 LSDFDFELPEALIAQHPAAERSASRLLDGTGEVSV-----DRIFKDLPGLLRAGDLLVFN 66
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKVI A+L G + ++ + + N + + R SK + G + G
Sbjct: 67 DTKVINARLFGEKTT-----GGKVELLIERVLGGNQVAAHMRVSKKPEVGATIKMTCAPG 121
Query: 123 -QSRLEATVIDKW-NTGEILLVFSISGIELERQISLV---GTIPLPPYIARKRPIDARDY 177
+ L AT++ +W N + F +S + +L+ G +PLPPYI D
Sbjct: 122 HEDGLCATLLGRWPNVDGPIYRFVLSNDRGDDPYTLMERHGHVPLPPYITHSD--SPEDV 179
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT +AK G+VAAPTA LHF + ++L +IG++ VTLHVGAGTF PVK E+ +
Sbjct: 180 QRYQTVFAKNPGAVAAPTAALHFDEAVFAQLDAIGVQRAHVTLHVGAGTFQPVKTENIAE 239
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MHSE + T +A+ + K+RGGRIV+VGTTS+R LE+ + GI SG TNIFI
Sbjct: 240 HQMHSEWYNVPLETQEAIAACKARGGRIVAVGTTSVRTLES-WAKTGIA---SGDTNIFI 295
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPG+ F+ VD+L++NFHLPKS+L+MLVSAF G +Y+ AI+ YRF+SYGD+ LL
Sbjct: 296 TPGFDFKLVDVLVTNFHLPKSSLMMLVSAFTGYGHVMGLYRDAIARGYRFFSYGDSMLLT 355
Query: 358 QK 359
++
Sbjct: 356 RR 357
>gi|229918408|ref|YP_002887054.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Exiguobacterium sp. AT1b]
gi|229469837|gb|ACQ71609.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Exiguobacterium sp. AT1b]
Length = 352
Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 139/359 (38%), Positives = 206/359 (57%), Gaps = 16/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ V ++DF+LP IA P+ R S+RL+V+ I D+ +LN DA+V
Sbjct: 6 LNVNDYDFELPEELIAQVPLLDRTSSRLLVLDRETGD---IEHRHFRDVLDYLNEGDALV 62
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+++V+ A+L G + ++ L + + W +P+K ++ G I+ F
Sbjct: 63 VNDSRVLPARLFGAK----QETGGKVELLLLKQTEDDVWEALVKPAKKVRVGSIVEF--- 115
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L A +++ G F GI E + +GT+PLPPYI + +D +D Y
Sbjct: 116 -GDGLLRAECVEELPEGGRRFKFDYDGIFYE-ILDELGTMPLPPYI--REQLDDQDR--Y 169
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +GS AAPTAGLHFT LL + G+++ +TLHVG GTF PV + ++H M
Sbjct: 170 QTVYARERGSAAAPTAGLHFTEELLEAAKAKGVRLIPLTLHVGLGTFRPVTADSIEEHTM 229
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +A AL +++ GGRI +VGTTS R LET + G SG+T+IFI PG
Sbjct: 230 HSEYFELSAESAAALREIRANGGRIFAVGTTSTRTLETIMRDHGDFVESSGWTDIFIYPG 289
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
+A+D L++NFHLPKSTL+MLVSAF + Y+ A++ YRF+S+GD L+ +K
Sbjct: 290 VELKAIDGLITNFHLPKSTLVMLVSAFATRDIILHAYRTAVAERYRFFSFGDAMLITRK 348
>gi|269121052|ref|YP_003309229.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase [Sebaldella
termitidis ATCC 33386]
gi|268614930|gb|ACZ09298.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase [Sebaldella
termitidis ATCC 33386]
Length = 339
Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 142/357 (39%), Positives = 203/357 (56%), Gaps = 18/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP + IA + PRD ++LMV+ N VI ++ +L D +V
Sbjct: 1 MKLSDFDFDLPDNLIAQSAMEPRDHSKLMVLEKNKQ---VIEHKKFYNISDYLKKGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N T+VI A+L G + + C L R+ N+W V +P+K +K G L F
Sbjct: 58 VNRTRVIPARLFGKKDTG-----SILECFLLKRIDLNTWEVLLKPAKKLKIGQKLVFL-- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ +LEA + + + G +L F G E + +G +PLPPYI + +D Y
Sbjct: 111 --EGKLEAVLKEVKDDGNRILEFIYEG-NFEEILDELGEMPLPPYITEQ----LKDKNRY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK SVAAPTAGLHFT+ LL +L G+++ + L VG GTF PV+ E+ +H M
Sbjct: 164 QTVYAKEGESVAAPTAGLHFTNELLEKLKDSGVELTEIYLDVGLGTFRPVQTENILEHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I +A+ +N K G RI++VGTT++R LE++ +I+ G T+IFI
Sbjct: 224 HHEKYHIPEESAEIINRAKREGRRIIAVGTTTVRTLESSNNGAEVIS-GDGETDIFIYGD 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ VD L++NFHLPKSTLLML+SAF G Y+ AI YRFYS+GD ++
Sbjct: 283 YKFKIVDALITNFHLPKSTLLMLISAFAGKNFIFTAYETAIQEKYRFYSFGDAMFIY 339
>gi|145632489|ref|ZP_01788223.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae 3655]
gi|144986684|gb|EDJ93236.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae 3655]
Length = 363
Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 142/364 (39%), Positives = 209/364 (57%), Gaps = 19/364 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R S RL+ ++ I SD+ ++ D ++
Sbjct: 1 MRVSDFNFDLPDELIARYPKTDRVSCRLLQLNGENG---EIFHRTFSDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + + R SK K+G L F +
Sbjct: 58 FNNTRVIPARMFGRKASG-----GKIEVLVERMLDEHRFLAHIRSSKSPKEGAEL-FLGE 111
Query: 121 D--GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
D G++ V+ ++ + S L + +G +PLPPYI RP + D
Sbjct: 112 DKLGENNGIKAVMKARHSSLFEVELSDKSTALLDVLQTIGHMPLPPYI--DRPDEEADQE 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y+K+ G+VAAPTAGLHF NLL +L + G+ FVTLHVGAGTF PV+VE+ +DH
Sbjct: 170 CYQTVYSKVPGAVAAPTAGLHFDENLLEKLKAKGVNFEFVTLHVGAGTFQPVRVENIEDH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTED----GIINPWSGF 292
+MH+E + A+ + K G R+++VGTTS+R +E+A + E+ +I P+
Sbjct: 230 VMHAEYVEVSQEVCNAIIATKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSD 289
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + T Y+HA+ YRF+SYGD
Sbjct: 290 TSIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKHAVQEKYRFFSYGD 349
Query: 353 TSLL 356
+
Sbjct: 350 AMFI 353
>gi|104780219|ref|YP_606717.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
entomophila L48]
gi|166216739|sp|Q1IEK2|QUEA_PSEE4 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|95109206|emb|CAK13903.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein ) [Pseudomonas entomophila L48]
Length = 349
Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 148/357 (41%), Positives = 207/357 (57%), Gaps = 22/357 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R +RL+V L P ++ +DL +L D +
Sbjct: 1 MRVADFSFELPDSLIARHPLAERHGSRLLV----LDGPSGELAHKQFTDLLEYLRPGDLM 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + ++ + + + + R SK K+G +
Sbjct: 57 VFNNTRVIPARLFGQKASG-----GKLEVLVERVLDSHRVLAHVRASKAPKEGAQILI-- 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
DG EA ++ + +T L FS + L + VG +PLPPYI RP + D
Sbjct: 110 -DGGG--EAEMVARHDT-LFELRFSEEVLPL---LERVGHMPLPPYI--DRPDEGADRER 160
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ G+VAAPTAGLHF LL ++ + G++ FVTLHVGAGTF PV+V+ +DH
Sbjct: 161 YQTVYAERAGAVAAPTAGLHFDEALLEKIAAKGVERAFVTLHVGAGTFQPVRVDKIEDHT 220
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH E + A+ + ++RGGR+++VGTTS+R LE+A DG++ +SG T+IFI P
Sbjct: 221 MHKEWLEVSQDVVDAVAACRARGGRVIAVGTTSVRSLESA-ARDGVLKAFSGDTDIFIFP 279
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
G F VD L++NFHLP+STLLMLVSAF G ET Y A+ YRF+SYGD +
Sbjct: 280 GRPFHVVDCLVTNFHLPESTLLMLVSAFAGYPETMAAYAAAVEQGYRFFSYGDAMFI 336
>gi|90579387|ref|ZP_01235197.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
angustum S14]
gi|90440220|gb|EAS65401.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
angustum S14]
Length = 350
Score = 242 bits (617), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 149/369 (40%), Positives = 211/369 (57%), Gaps = 31/369 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDFDLP IA P R ++RL+ + N ++ D+ + + D +V
Sbjct: 1 MQVSDFDFDLPDELIARYPQPERTASRLLQMTGNTGE---LAHKGFKDVLDLVQAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF--- 117
FNNT+VI A++ F H K I + + S + R SK K G+ L
Sbjct: 58 FNNTRVIPARM----FGHKASGGK-IEVLVERMLDDKSILAHVRASKPPKPGNELLLGEN 112
Query: 118 --FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
FS + +R +A ++N+ + +L + VG +PLPPYI RP +
Sbjct: 113 GEFSAEMVARHDALFEIRFNSDKTVLEI----------LDAVGHMPLPPYI--DRPDEDA 160
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y G+VAAPTAGLHF L++ L + G+ FVTLHVGAGTF PV+V+D
Sbjct: 161 DKERYQTVYNAKPGAVAAPTAGLHFDDKLMADLKAKGVNFAFVTLHVGAGTFQPVRVDDI 220
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN-----PWS 290
+DH MHSE + A+N ++ GGRI++VGTTS+R LE+A +D + N P+
Sbjct: 221 NDHHMHSEYVEVPEEVVTAVNETRANGGRIIAVGTTSVRSLESA-AQDALKNGTEFKPFF 279
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G T IFI PGY+F+ VD+L++NFHLP+STL+MLVSAF G E T Y A+++ YRF+SY
Sbjct: 280 GDTEIFIYPGYQFQLVDVLITNFHLPESTLIMLVSAFAGYENTMNAYHEAVANKYRFFSY 339
Query: 351 GDTSLLFQK 359
GD+ + +K
Sbjct: 340 GDSMFITRK 348
>gi|269103295|ref|ZP_06155992.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Photobacterium damselae subsp. damselae CIP 102761]
gi|268163193|gb|EEZ41689.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Photobacterium damselae subsp. damselae CIP 102761]
Length = 351
Score = 242 bits (617), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 149/369 (40%), Positives = 208/369 (56%), Gaps = 31/369 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDFDLP IA P R S+RL+ + N I+ D+ +N D ++
Sbjct: 2 MQVSDFDFDLPDELIARYPQPERTSSRLLQLDGNSGD---IAHKTFKDVLDLVNPGDLMI 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + S + R SK K G L
Sbjct: 59 FNNTRVIPARMFGRKASG-----GKLEVLVERMLDEKSILAHVRASKSPKPGTELLLGEN 113
Query: 121 DGQS-----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
D S R +A ++N+ + +L + VG +PLPPYI RP +
Sbjct: 114 DEYSAEMVARHDALFEIRFNSDKTVLEI----------LDEVGHMPLPPYI--DRPDEDA 161
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y G+VAAPTAGLHF LL+ L G+ FVTLHVGAGTF PV+V++
Sbjct: 162 DKERYQTVYNAKPGAVAAPTAGLHFDDALLAALKEKGVNFAFVTLHVGAGTFQPVRVDNI 221
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN-----PWS 290
DDH MHSE + A+N K+ GGR+V+VGTTS+R LE+A +D + N P+
Sbjct: 222 DDHHMHSEYVEVPEEVVTAINETKANGGRVVAVGTTSVRSLESA-AQDAVKNGTELKPFF 280
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G T IFI PGY+F+ VD+L++NFHLP+STL+MLVSAF G E T Y+ A+++ +RF+SY
Sbjct: 281 GDTEIFIFPGYQFQLVDVLITNFHLPESTLIMLVSAFAGYEHTMNAYKDAVANQFRFFSY 340
Query: 351 GDTSLLFQK 359
GD+ + +K
Sbjct: 341 GDSMFVTRK 349
>gi|148827384|ref|YP_001292137.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae PittGG]
gi|166216725|sp|A5UG48|QUEA_HAEIG RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|148718626|gb|ABQ99753.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae PittGG]
Length = 363
Score = 242 bits (617), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 142/364 (39%), Positives = 209/364 (57%), Gaps = 19/364 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R S RL+ ++ I SD+ ++ D ++
Sbjct: 1 MRVSDFNFDLPDELIARYPKTDRVSCRLLQLNGENG---EIFHRTFSDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + + R SK K+G L F +
Sbjct: 58 FNNTRVIPARMFGRKASG-----GKIEVLVERMLDEHRFLAHIRSSKSPKEGAEL-FLGE 111
Query: 121 D--GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
D G++ V+ ++ + S L + +G +PLPPYI RP + D
Sbjct: 112 DKLGENNGIKAVMKARHSSLFEVELSDKSTALLDVLQTIGHMPLPPYI--DRPDEEADKE 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y+K+ G+VAAPTAGLHF NLL +L + G+ FVTLHVGAGTF PV+VE+ +DH
Sbjct: 170 CYQTVYSKVPGAVAAPTAGLHFDENLLEKLKAKGVNFEFVTLHVGAGTFQPVRVENIEDH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTED----GIINPWSGF 292
+MH+E + A+ + K G R+++VGTTS+R +E+A + E+ +I P+
Sbjct: 230 VMHAEYVEVSQEVCNAIIATKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSD 289
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + T Y+HA+ YRF+SYGD
Sbjct: 290 TSIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKHAVQEKYRFFSYGD 349
Query: 353 TSLL 356
+
Sbjct: 350 AMFI 353
>gi|91786377|ref|YP_547329.1| S-adenosylmethionine [Polaromonas sp. JS666]
gi|91695602|gb|ABE42431.1| S-adenosylmethionine [Polaromonas sp. JS666]
Length = 353
Score = 242 bits (617), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 154/361 (42%), Positives = 205/361 (56%), Gaps = 24/361 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF LP IA P R ++RL+ S P +D +DLP L D +VFN
Sbjct: 7 LSDFDFALPEELIAQHPAAQRSASRLL---DGRSSP--ATDRRFADLPDLLTPGDLLVFN 61
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTL-HMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
+T+V+ A+L G + R E I L + + + + + + SK + G +L D
Sbjct: 62 DTQVVKARLFGQKSTG-GRLELLIERVLPALADASHEVAAHMKVSKKPQPGAVLQM---D 117
Query: 122 GQSRLEATVIDKWNTGEILLV---FSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
G AT++ +W + L FS L Q G +PLPPYI A D +
Sbjct: 118 GG--FTATLLGRWPQEDGPLYRFRFSSDPYALMAQH---GHVPLPPYITHSD--SAEDEL 170
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT +AK G+VAAPTA LHF +L++L + GI VTLHVGAGTF PVK E DH
Sbjct: 171 RYQTVFAKNPGAVAAPTAALHFDEAMLAQLEARGIARASVTLHVGAGTFQPVKTETIADH 230
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH E + A T QA+ + K+RGGR+V+VGTT++R LE+ P TNIFIT
Sbjct: 231 TMHFERFEVPAATQQAIAACKARGGRVVAVGTTTVRALESHAK----FGPACDDTNIFIT 286
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ F VD+L++NFHLPKSTL+MLVSAF G E +YQHAI+ YRF+SYGD LL +
Sbjct: 287 PGFEFAVVDLLLTNFHLPKSTLMMLVSAFAGYEHIMALYQHAIAGRYRFFSYGDAMLLAR 346
Query: 359 K 359
K
Sbjct: 347 K 347
>gi|254228677|ref|ZP_04922101.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio sp.
Ex25]
gi|262395137|ref|YP_003286991.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio sp.
Ex25]
gi|151938856|gb|EDN57690.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio sp.
Ex25]
gi|262338731|gb|ACY52526.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio sp.
Ex25]
Length = 350
Score = 241 bits (616), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 147/370 (39%), Positives = 212/370 (57%), Gaps = 33/370 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N + D +D+ + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQPERTASRLLQMDGNTG---ELIDGTFTDVLGQVQPGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCH------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
FNNT+VI A+L G + + R E S H+R S + +P I G+
Sbjct: 58 FNNTRVIPARLFGRKESGGKLEVLVERMLDEKSILAHVRCSKSP-----KPGTTIIVGEN 112
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
+ S + +R +A K+N + +L + +G +PLPPYI RP +
Sbjct: 113 DEY-SAEMVARHDALFELKFNADKTVLEI----------LEEIGHMPLPPYI--DRPDED 159
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D YQT Y + G+VAAPTAGLHF LL ++ + G + +VTLHVGAGTF PVKVE+
Sbjct: 160 ADKERYQTVYNQKPGAVAAPTAGLHFDDVLLEKIKAKGAEFAYVTLHVGAGTFQPVKVEN 219
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-----INPW 289
+DH MH+E + +A+ + K+RGGRI++VGTTS+R LE+A +D + + P+
Sbjct: 220 INDHHMHAEYVEVPQEVVEAIKATKARGGRIIAVGTTSVRSLESA-AQDALKKGTELAPF 278
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
G T IFI PGY ++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ + YRF+S
Sbjct: 279 FGDTEIFIFPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYENTMNAYKHAVENKYRFFS 338
Query: 350 YGDTSLLFQK 359
YGD+ + +K
Sbjct: 339 YGDSMFIKKK 348
>gi|148653721|ref|YP_001280814.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Psychrobacter sp. PRwf-1]
gi|172048561|sp|A5WGS3|QUEA_PSYWF RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|148572805|gb|ABQ94864.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Psychrobacter sp. PRwf-1]
Length = 390
Score = 241 bits (616), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 148/371 (39%), Positives = 203/371 (54%), Gaps = 26/371 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ V ++D+DLP IA P+ R ++RLM + VI D SDLP L + D IV
Sbjct: 27 LSVADYDYDLPDEYIARYPLAERSASRLMYLPAQKENTAVIQDRQFSDLPELLQAGDLIV 86
Query: 61 FNNTKVITAQLNGVRFCH------INR--REKEISCTLHMRVSPNSWSVYARPSKVIKKG 112
FN+TKV+ A+L G + + R + E + + N + R SK K G
Sbjct: 87 FNDTKVMKARLFGQKDTGGKVEVLVERLTDDTEFTTDESGQSFDNVALCHVRASKAPKLG 146
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
L G +E +I + E L + S L + G +P+PPY +R
Sbjct: 147 QRLVL----GDGNIECVMIGRH---ENLFILSFKNPILP-DLEQYGELPIPPYF--ERHA 196
Query: 173 DARDYVDYQTTY---AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
D D V YQT + K+ SVAAPTA LHF +L +L GI +VTLHVGAGTF P
Sbjct: 197 DETDNVRYQTVFHDPTKL-ASVAAPTASLHFDDKVLKQLADKGINTAYVTLHVGAGTFAP 255
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA----TTEDGI 285
VK ++ +H MHSE + TA +N G +++++GTT R+LETA E G
Sbjct: 256 VKTDNLLNHTMHSEYANLPQATADLINQTHQNGNKVIAIGTTVTRVLETAYQKTADEHGH 315
Query: 286 INPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAY 345
I+ WSG T+IFI PG++F +D L++NFHLPKSTLLMLVSAF G ++ Y+HA++ Y
Sbjct: 316 ISTWSGDTDIFIYPGFKFGVIDKLLTNFHLPKSTLLMLVSAFAGKANIEQAYEHAVAQKY 375
Query: 346 RFYSYGDTSLL 356
RF+SYGD LL
Sbjct: 376 RFFSYGDAMLL 386
>gi|108761956|ref|YP_632860.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Myxococcus
xanthus DK 1622]
gi|108465836|gb|ABF91021.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Myxococcus
xanthus DK 1622]
Length = 371
Score = 241 bits (616), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 145/368 (39%), Positives = 206/368 (55%), Gaps = 22/368 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++DF LP S+IA P+ RD++RLM + + S +DL L D +V N
Sbjct: 14 LSDYDFALPESQIAQAPLAERDASRLMTISRSSGT---WSHRRFADLQELLRPGDLLVLN 70
Query: 63 NTKVITAQLNGVRFCHINRRE--------KEISCTLHMRVSPNS--WSVYARPSKVIKKG 112
+ +VI A+L G + R E + + + +P S W + SK +K G
Sbjct: 71 DARVIPARLLGQKAGTGGRVELLVVRPAAQNTLTSAALGAAPESLDWVCLGQASKGLKPG 130
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGEILLVF-SISGIELERQISLVGTIPLPPYIARKRP 171
+ F S LEA + + GE + F + G L + G +PLPPYI R+
Sbjct: 131 QRVMFASG-----LEAEIQEALGGGEYRVRFHAPPGASLAALLDAAGRLPLPPYITRE-- 183
Query: 172 IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK 231
DA D YQT YA+ G+VAAPTAGLHFT L+ L + G+ VTL VG GTF+PV+
Sbjct: 184 PDAADAERYQTVYARASGAVAAPTAGLHFTQETLAALAARGVHRALVTLDVGPGTFLPVR 243
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-EDGIINPWS 290
+D D H MH E + TA+A+N+ ++ G R+V+VGTT +R LE+AT E G +
Sbjct: 244 EDDLDKHHMHPERYTVPEATAKAINAARAEGRRVVAVGTTVVRTLESATDPETGRLRAGP 303
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G T +FI PG+ FR VD+L++NFHLP+STL++LVSA G E T + Y A+ YRF+SY
Sbjct: 304 GETTLFIRPGFAFRQVDLLLTNFHLPRSTLVVLVSALLGRERTLEAYAEAVRAGYRFFSY 363
Query: 351 GDTSLLFQ 358
GD L+ +
Sbjct: 364 GDAMLVSE 371
>gi|325474824|gb|EGC78010.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Treponema
denticola F0402]
Length = 347
Score = 241 bits (616), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 147/369 (39%), Positives = 202/369 (54%), Gaps = 34/369 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+ KEF+FDLP IA P R RL+++ + D L ++LP L N +V
Sbjct: 1 MLTKEFNFDLPEELIAQSPSEKRGGDRLLILDKQSGK---LEDRLFTELPEILPKNALMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------WSVYARPSKVIKKGDI 114
FNN+KV R I + K + + ++P W V A+ +K K G
Sbjct: 58 FNNSKV--------RHARIYAKSKTNAVCEFLMINPMKDSDGSLWQVMAKKAKRQKPGKT 109
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQIS-----LVGTIPLPPYIARK 169
F +DG EA +I+ EI L ++ R I G +PLPPYI RK
Sbjct: 110 --FLFEDGT---EAEIIE----SEIPLESEFRCMKFNRVIDDEWLDKYGHMPLPPYIHRK 160
Query: 170 RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
+ D YQT YA+I GS+AAPTAGLHFT +LS++ GI + +VTLHVG GTF+P
Sbjct: 161 D--NQEDADRYQTVYAEIYGSIAAPTAGLHFTQEVLSKIRDKGIDIEYVTLHVGLGTFLP 218
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINP 288
V+ E +DH MH E FI TAQA+ K G I++VGTT++R LE+A E +
Sbjct: 219 VRAEKIEDHKMHREHFFISEKTAQAVEKAKKEGRPIIAVGTTTVRTLESAWDETRKELKR 278
Query: 289 WSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
+ T+IFI P Y+F+ +D L +NFH P+S+L+MLVSA G E K Y+HA+ Y+F+
Sbjct: 279 GNQSTDIFIYPSYKFKLIDKLFTNFHTPESSLVMLVSALAGKENIFKAYRHAVEEKYKFF 338
Query: 349 SYGDTSLLF 357
SYGD L+
Sbjct: 339 SYGDAMLIL 347
>gi|170726109|ref|YP_001760135.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
woodyi ATCC 51908]
gi|238688701|sp|B1KNG3|QUEA_SHEWM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|169811456|gb|ACA86040.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Shewanella
woodyi ATCC 51908]
Length = 345
Score = 241 bits (616), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 147/369 (39%), Positives = 201/369 (54%), Gaps = 36/369 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P+ R S+RL+ + N + D+ +D+ +N D +V
Sbjct: 1 MRVTDFSFELPDELIARYPMPERTSSRLLSLEGNSGK---LGDNQFTDILDMVNPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G +KE L + V +++ IL
Sbjct: 58 FNNTRVIPARLFG---------QKETGGKLEILVE-----------RMLDDKRILAHVRS 97
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELE--------RQISLVGTIPLPPYIARKRPI 172
++ V +L + ELE + VG +PLPPYI RP
Sbjct: 98 SKSPKVNTKVCLDGGYEMTMLARHDALFELELNDEKTILEVLEKVGHMPLPPYI--DRPD 155
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+ D YQT Y G+VAAPTAGLHF LL+RL G+ FVTLHVGAGTF PVKV
Sbjct: 156 EDADKERYQTVYNDAPGAVAAPTAGLHFDDALLNRLKEKGVDTAFVTLHVGAGTFQPVKV 215
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWS 290
+D DH MHSE + + K+ GGR+++VGTTS+R LE+A +ED + P+
Sbjct: 216 DDVLDHKMHSEWAEVSQEVVDKIAHTKAHGGRVIAVGTTSVRSLESAAKASEDE-LQPFC 274
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
T+IFI PGY F+ VD +++NFHLP+STL+ML+SAF G +E K YQHAI+ YRF+SY
Sbjct: 275 RDTDIFIYPGYEFKVVDAMVTNFHLPESTLIMLLSAFAGFDEVKNAYQHAIAQKYRFFSY 334
Query: 351 GDTSLLFQK 359
GD + +K
Sbjct: 335 GDAMFVTKK 343
>gi|307297287|ref|ZP_07577093.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermotogales bacterium mesG1.Ag.4.2]
gi|306916547|gb|EFN46929.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermotogales bacterium mesG1.Ag.4.2]
Length = 336
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 139/357 (38%), Positives = 199/357 (55%), Gaps = 21/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V ++DF+LP IA +P PRDS+RL+V+ + +++ FL+ D +V
Sbjct: 1 MKVSDYDFELPEELIAQKPAIPRDSSRLLVIDRETYS---FEHRVFAEIEDFLHPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN++VI A+L G + ++ L ++ W RP IK G++L F
Sbjct: 58 LNNSRVIPARLLGKK-----ETGAKVEAVLTEKLGGGLWKAIVRPGSKIKPGNVLLF--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+++ VI+ + +L F G + + G + +PPY+ + P + Y
Sbjct: 110 ---NKISCKVIEHCDDSSRILDF---GSVTDEDVKKAGLLAIPPYV-KYYPDNPESY--- 159
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ +GSVAAPTAGLHFT LL RL + V F+TLHVG GTF PVK E D H M
Sbjct: 160 QTVYSRPEGSVAAPTAGLHFTDTLLERLRKKDVDVQFITLHVGIGTFRPVKSETVDGHKM 219
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + + A+ L ++ RIV+VGTT++R LE+ G I SG T+IFI P
Sbjct: 220 HNEFFSVSSEVAERLERARTEKRRIVAVGTTTVRTLESIVARHGCIVGDSGHTDIFIYPP 279
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+A D L++NFHLP+STLLMLVSAF G E Y+ AI YRF+S+GD L+
Sbjct: 280 YTFKATDSLITNFHLPRSTLLMLVSAFAGRELILSAYREAILKRYRFFSFGDACLIL 336
>gi|327481774|gb|AEA85084.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
stutzeri DSM 4166]
Length = 349
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 152/360 (42%), Positives = 205/360 (56%), Gaps = 28/360 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP + IA P+ R ++RL+V+ +S +DL ++ D +V
Sbjct: 1 MQVADFYFELPDALIARHPLAERRASRLLVLDGQSGQ---MSHRNFADLLDYVRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHM---RVSPN-SWSVYARPSKVIKKGDILH 116
FNNT+VI A+L G +K L + RV+ N S + R SK K G +
Sbjct: 58 FNNTRVIPARLFG---------QKATGGKLEILVERVTGNRSVLAHVRSSKSPKPGSQIL 108
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
DG E + LVF + L + +G +PLPPYI RP DA D
Sbjct: 109 L---DGGGAAEMVA---RHDALFELVFDEDVLPL---LERIGHMPLPPYI--DRPDDAAD 157
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YA+ G+VAAPTAGLHF LL L + G++ +VTLHVGAGTF PV+VE +
Sbjct: 158 RERYQTVYAQRAGAVAAPTAGLHFDEALLDALRNAGVQTAYVTLHVGAGTFQPVRVERIE 217
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+H MH E + A+ + ++RGGR+++VGTTS+R LETA DG + P+SG T+IF
Sbjct: 218 EHHMHREWLEVTQEVVDAVAACRARGGRVIAVGTTSVRSLETA-ARDGELKPFSGDTDIF 276
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PG F VD L++NFHLP+STLLMLVSAF G ET Y A++ YRF+SYGD +
Sbjct: 277 IYPGKTFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAEAVAQRYRFFSYGDAMFI 336
>gi|16272205|ref|NP_438415.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae Rd KW20]
gi|260580871|ref|ZP_05848696.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae RdAW]
gi|1172814|sp|P44595|QUEA_HAEIN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|1573210|gb|AAC21912.1| queuosine biosynthesis protein (queA) [Haemophilus influenzae Rd
KW20]
gi|260092494|gb|EEW76432.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae RdAW]
Length = 363
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 142/364 (39%), Positives = 208/364 (57%), Gaps = 19/364 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R S RL+ ++ I SD+ ++ D ++
Sbjct: 1 MRVSDFNFDLPDELIARYPKTDRVSCRLLQLNGENG---EIFHRTFSDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + + R SK K+G L F +
Sbjct: 58 FNNTRVIPARMFGRKASG-----GKIEVLVERMLDEHRFLAHIRSSKSPKEGAEL-FLGE 111
Query: 121 D--GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
D G++ V+ + + S L + +G +PLPPYI RP + D
Sbjct: 112 DKLGENNGIKAVMKARHGALFEVELSDKSTALLDVLQTIGHMPLPPYI--DRPDEEADQE 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y+K+ G+VAAPTAGLHF NLL +L + G+ FVTLHVGAGTF PV+VE+ +DH
Sbjct: 170 CYQTVYSKVPGAVAAPTAGLHFDENLLEKLKAKGVNFEFVTLHVGAGTFQPVRVENIEDH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTED----GIINPWSGF 292
+MH+E + A+ + K G R+++VGTTS+R +E+A + E+ +I P+
Sbjct: 230 VMHAEYVEVSQEVCNAIIATKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSD 289
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + T Y+HA+ YRF+SYGD
Sbjct: 290 TSIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKHAVKEKYRFFSYGD 349
Query: 353 TSLL 356
+
Sbjct: 350 AMFI 353
>gi|332169225|gb|AEE18480.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Krokinobacter diaphorus 4H-3-7-5]
Length = 349
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 142/363 (39%), Positives = 201/363 (55%), Gaps = 22/363 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F+FDLP +A RP RD +RLMV++ I + D+ + D +V
Sbjct: 1 MKLSHFNFDLPDELLADRPAENRDESRLMVLNRKEQT---IEHKMFKDIIDYFEPEDVMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREK-----EISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
NNTKV A+L G +EK E+ + W V P++ I+ G+ L
Sbjct: 58 LNNTKVFPARLYG-------NKEKTGARIEVFLLRELNSETRLWDVLVDPARKIRIGNKL 110
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPID 173
+F D +S L A VID + L F G E ++++ +G PLP YI R+ ++
Sbjct: 111 YF--GDDES-LVAEVIDNTTSRGRTLRFLYDGSYEEFRKKLTSLGETPLPKYINRE--VE 165
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT YA +G+VAAPTAGLHF+ +LL RL G+ VTLHVG GTF V+VE
Sbjct: 166 PEDEDRYQTIYATEEGAVAAPTAGLHFSKHLLKRLEIKGVDFAEVTLHVGLGTFSAVEVE 225
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
D H M SE +I P + +N RI +VGTTS+R++E+A + + +N + G+T
Sbjct: 226 DLSKHKMDSEEAYIHKPATEIINKALKEKRRICAVGTTSMRVMESAVSSNHTLNEFGGWT 285
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
N FI P Y F + +++NFH PKSTLLM+VSAF G + K+ Y+ A+ Y+FYSYGD
Sbjct: 286 NKFIFPPYDFSIANCMITNFHTPKSTLLMMVSAFAGHDFMKRAYEEAVKEKYKFYSYGDA 345
Query: 354 SLL 356
L+
Sbjct: 346 MLI 348
>gi|95929301|ref|ZP_01312045.1| S-adenosylmethionine [Desulfuromonas acetoxidans DSM 684]
gi|95134799|gb|EAT16454.1| S-adenosylmethionine [Desulfuromonas acetoxidans DSM 684]
Length = 350
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 139/356 (39%), Positives = 202/356 (56%), Gaps = 14/356 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F++DLP IA P RD +RLMV+ + ++SDH + + D +V
Sbjct: 1 MYVTDFNYDLPQELIAQHPCEQRDGSRLMVL--DCQAEKIVSDHF-RQVDRYFEQGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G C + + E+ + W R SK + G L Q
Sbjct: 58 INDTRVIPARLLG---CKESGGKVEVFLVRKLAEEGECWLCLTRASKGPRPGTRLLLGDQ 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L ATV++ G + F + G + + +G +PLPPYI R+ + R+ Y
Sbjct: 115 -----LTATVMEGGGDGYRHIRFDVEG-DFLSLLDKIGRLPLPPYIDREPQGEDRER--Y 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QTT++ G+VAAPTAGLHFT +L +L + G+ V +TLHVG GTF+PV+V++ ++H M
Sbjct: 167 QTTFSSRPGAVAAPTAGLHFTPEILDKLRAKGVIVCPLTLHVGLGTFLPVRVDNVEEHRM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E I TA +N K G R++++GTT R LE + G + G T++FI PG
Sbjct: 227 HAEAYCIPDETAVQVNRAKREGRRVIALGTTVTRTLEFSVDPQGELQAGDGMTDMFIYPG 286
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF+ VD L++NFHLP+STLLMLVSA G E + Y+ A+ YRF+SYGD L+
Sbjct: 287 YRFKIVDALLTNFHLPQSTLLMLVSALAGREFVLQAYRQAVEERYRFFSYGDCMLI 342
>gi|59712577|ref|YP_205353.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
fischeri ES114]
gi|75431538|sp|Q5E3D1|QUEA_VIBF1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|59480678|gb|AAW86465.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
fischeri ES114]
Length = 350
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 141/366 (38%), Positives = 217/366 (59%), Gaps = 25/366 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ ++ N ++D +D+ + + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPQPERTASRLLQLNGNSGE---LNDGQFTDILDLVQAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G++ ++ + + +S + R SK K G +L +
Sbjct: 58 FNNTRVIPARMFGMKASG-----GKLEVLVERVLDEHSVLAHVRCSKSPKPGTML-LLGE 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISL---VGTIPLPPYIARKRPIDARDY 177
+ + EA ++ + +T +F I ++ + + +G +PLPPYI RP + D
Sbjct: 112 NQEH--EAEMVARHDT-----LFEIRFTSDKKVLDILDEIGHMPLPPYI--DRPDEDADK 162
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT Y K G+VAAPTAGLHF + +L ++ + G++ +VTLHVGAGTF PV+V++ +
Sbjct: 163 ERYQTVYNKKPGAVAAPTAGLHFDTEILEKMKAKGVEFAYVTLHVGAGTFQPVRVDNILE 222
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFT 293
H MHSE + A+N+ K+RGGR+VSVGTTS+R LE+A + + P+ T
Sbjct: 223 HHMHSEYAEVSQEVIDAINATKARGGRVVSVGTTSVRSLESAAQHALKQGTELAPFFDDT 282
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFI PGY F+ VD L++NFHLP+STL+MLVSAF G E T K Y+ A+++ YRF+SYGD
Sbjct: 283 EIFIYPGYEFQVVDALVTNFHLPESTLIMLVSAFAGYENTMKAYEQAVNNKYRFFSYGDA 342
Query: 354 SLLFQK 359
+ +K
Sbjct: 343 MFITKK 348
>gi|301154782|emb|CBW14245.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
parainfluenzae T3T1]
Length = 363
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 147/369 (39%), Positives = 211/369 (57%), Gaps = 29/369 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R S RL+ ++ IS +D+ ++ D ++
Sbjct: 1 MRVSDFHFDLPDELIARYPKEDRSSCRLLQLNGENG---EISHRTFTDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + +S + + + R SK K+G L F +
Sbjct: 58 FNNTRVIPARMFGRKASG-----GKIEVLVERVLSEHHFLAHIRSSKAPKEGAEL-FLGE 111
Query: 121 D--GQSR-LEATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARKRPID 173
D G+++ +EA +I + +T +F + + R + +G +PLPPYI RP +
Sbjct: 112 DKLGENKGVEAIMIGRQDT-----LFEVELADKSRNVLDVLQEIGHMPLPPYI--DRPDE 164
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT Y K+ G+VAAPTAGLHF LL +L G+ FVTLHVGAGTF PV+VE
Sbjct: 165 EADQECYQTVYNKVPGAVAAPTAGLHFDDELLQKLHEKGVNFEFVTLHVGAGTFQPVRVE 224
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA---TTEDG---IIN 287
+ +DHIMH+E + A+ K G R+++VGTTS+R +ETA E+G +I
Sbjct: 225 NIEDHIMHAEYVELSQEVCNAIIETKKAGKRVIAVGTTSVRSVETAALSAEENGNPDLIE 284
Query: 288 PWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
P+ T+IFI PG FR VD L++NFHLP+STL+MLVSAF G T Y+ A+ + YRF
Sbjct: 285 PYFSDTSIFIYPGKSFRVVDALITNFHLPESTLIMLVSAFAGFSHTMNAYKSAVENRYRF 344
Query: 348 YSYGDTSLL 356
+SYGD +
Sbjct: 345 FSYGDAMFI 353
>gi|239809481|gb|ACS26207.1| unknown [uncultured bacterium]
Length = 349
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 152/361 (42%), Positives = 204/361 (56%), Gaps = 30/361 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F LP + IA P+ R ++RL+V+ +S +DL + D +V
Sbjct: 1 MQVADFFFQLPDALIARHPLAERRASRLLVLEGETGK---LSHRNFADLLDHVRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + V S + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKATG-----GKLEILVERVVGNRSVLAHVRSSKSPKAGSKILL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE-----LERQISLVGTIPLPPYIARKRPIDAR 175
DG EA +I + + +F + E LER +G +PLPPYI RP DA
Sbjct: 110 DGGG--EAKMIARHDA-----LFELEFDEDVLPLLER----IGHMPLPPYI--DRPDDAA 156
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT YA+ G+VAAPTAGLHF LL L G++ +VTLHVGAGTF PV+VE
Sbjct: 157 DRERYQTVYAQRAGAVAAPTAGLHFDEALLQMLRESGVETAYVTLHVGAGTFQPVRVERI 216
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
++H MH E + A+ + +SRGGR+++VGTTS+R LETA DG + P+SG T+I
Sbjct: 217 EEHHMHREWLEVGQDVVDAVAACRSRGGRVIAVGTTSVRSLETA-ARDGELKPFSGDTDI 275
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PG F VD L++NFHLP+STLLMLVSAF G ET Y A++ YRF+SYGD
Sbjct: 276 FIYPGKSFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAEAVAQRYRFFSYGDAMF 335
Query: 356 L 356
+
Sbjct: 336 I 336
>gi|148244311|ref|YP_001219005.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Vesicomyosocius okutanii HA]
gi|166218755|sp|A5CXQ6|QUEA_VESOH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|146326138|dbj|BAF61281.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Vesicomyosocius okutanii HA]
Length = 340
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 141/356 (39%), Positives = 208/356 (58%), Gaps = 22/356 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +K+FDFDLP S IA P+ R +RL++ + I D + + F S D ++
Sbjct: 1 MQLKDFDFDLPASLIAQHPIKNRTDSRLLIKRSS------IIDIQFNQIGDFFQSGDLLI 54
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L G + ++ + + N + S+ K G + F
Sbjct: 55 MNNTKVIPARLFGTK-----ETGGKVEIMIERILDENQVLAMIKASRAPKIGSCI-FLEN 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D ++ + + G L+F L ++ +G PLPPYI KR + +D Y
Sbjct: 109 DVN-----IIVYQKDNGFYTLIFETDS--LFDLLNNIGHTPLPPYI--KRTNNVQDLSRY 159
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF +LL++L GI FVTLH+G+GTF P++ ++ +H+M
Sbjct: 160 QTVYAQKDGAVAAPTAGLHFDDSLLAQLKIQGIDHLFVTLHIGSGTFTPIRTDNIKNHVM 219
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSEI I T +N K+ GGRI++VGTT++R+LE ++ ++G + +G T+IFI P
Sbjct: 220 HSEIFEISQVTVDRINLTKANGGRIIAVGTTTVRVLE-SSLKNGKLIAQNGETDIFIYPS 278
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+FR VD L++NFHLPKS+LLMLVSAF G ++ ++Y+HAI Y+F SYGD L
Sbjct: 279 YQFRIVDSLITNFHLPKSSLLMLVSAFIGRDKMLELYKHAIEQKYKFLSYGDAMFL 334
>gi|154250386|ref|YP_001411211.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fervidobacterium nodosum Rt17-B1]
gi|154154322|gb|ABS61554.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Fervidobacterium nodosum Rt17-B1]
Length = 349
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 142/353 (40%), Positives = 201/353 (56%), Gaps = 20/353 (5%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
+D+ LP IA PV PRDS+RLMV++ I + D+ +++ D +VFN TK
Sbjct: 16 YDYYLPEELIAQSPVEPRDSSRLMVLN---KATGEIQHRIFRDIGEYIHEGDLLVFNTTK 72
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSR 125
VI A+L G + N I L ++ W +P K +K+G + F ++ +
Sbjct: 73 VIPARLFGKKTTGAN-----IEILLLEKLGLGIWKCLVKPGKAVKEGTEIIF--ENTNMK 125
Query: 126 LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYA 185
+ + + G ++ FS E +I G +PLP YI R YQT YA
Sbjct: 126 MYGKCLSRAEEGTRVIEFSEKEDE---KIFSFGNVPLPHYIKNHNVKIER----YQTVYA 178
Query: 186 KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIG 245
K +GSVAAPTAGLHFT+ LL+ L + G+K V LHVG GTF PVKV D H MH E
Sbjct: 179 KHEGSVAAPTAGLHFTTELLNELKNKGVKTAEVVLHVGIGTFKPVKVGDIRQHKMHEEYY 238
Query: 246 FIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITPGYRFR 304
+ T A+N VK+ G R+++VGTT++R LET A + + +SG T+IFI P + F+
Sbjct: 239 IVSGETISAINEVKASGKRVIAVGTTTVRTLETIARLQKS--DSYSGKTDIFIYPPFEFK 296
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
VD L++NFHLPKS+L+MLVSAF G + T + Y+ A+ YRF+S+GD +F
Sbjct: 297 IVDALITNFHLPKSSLIMLVSAFAGYDLTMRAYRIAVQERYRFFSFGDAMFIF 349
>gi|285018699|ref|YP_003376410.1| s-adenosylmethionine:tRNA ribosyltransferase-isomerase (queuosine
biosynthesis protein quea) [Xanthomonas albilineans GPE
PC73]
gi|283473917|emb|CBA16418.1| probable s-adenosylmethionine:trna ribosyltransferase-isomerase
(queuosine biosynthesis protein quea) [Xanthomonas
albilineans]
Length = 371
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 143/357 (40%), Positives = 201/357 (56%), Gaps = 26/357 (7%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+F +DLP IA P+ R ++RL+ V P P D V DLP L D ++FN+T
Sbjct: 26 DFHYDLPDDLIAQAPLAERSASRLLWVPP---APAPFQDRQVRDLPQLLRVGDLLIFNDT 82
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSK----VIKKGDILHFFSQ 120
+VI A+L G + R E I L + + V P + G S+
Sbjct: 83 RVIPARLFGQKQTG-GRVEILIERLLGGQCARAQLGVSKSPQVGARIALDAGGEAEVLSR 141
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DG L F + G LE + G +PLPPYI R+ ++ R+ Y
Sbjct: 142 DGAF--------------YQLQFHVDGT-LEHWLQQAGRLPLPPYIRREPGLEDRER--Y 184
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF LL L G++V +TLHVGAGTF PV+VE + H M
Sbjct: 185 QTVFAREAGAVAAPTAGLHFDVPLLQALHERGVEVGHITLHVGAGTFQPVRVEALEQHQM 244
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A + + ++ GGR+++VGTT +R LE+A ++DG + P++G T +FI PG
Sbjct: 245 HHEWLNVGASLVEQVRRTRAAGGRVIAVGTTVVRALESA-SKDGELYPFAGETQLFILPG 303
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YR R+VD +++NFHLP+STLLM+V+AF G E Y+HAI+ YRF+SYGD LL+
Sbjct: 304 YRIRSVDAMVTNFHLPESTLLMMVAAFAGRERIFAAYRHAIAQRYRFFSYGDAMLLW 360
>gi|260899307|ref|ZP_05907702.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
parahaemolyticus AQ4037]
gi|308106664|gb|EFO44204.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
parahaemolyticus AQ4037]
Length = 350
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 146/370 (39%), Positives = 214/370 (57%), Gaps = 33/370 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N + D +D+ + + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQPERTASRLLQMDGNTG---ELIDGTFTDVLNQVQAGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCH------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
FNNT+VI A++ G + + R E S H+R S + +P I G+
Sbjct: 58 FNNTRVIPARMFGRKESGGKLEVLVERMLDEKSILAHVRCSKSP-----KPGTTIIVGEN 112
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
+ S + +R +A K+N+ + +L + +G +PLPPYI RP +
Sbjct: 113 DEY-SAEMVARHDALFELKFNSDKTVLEI----------LEEIGHMPLPPYI--DRPDED 159
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D YQT Y + G+VAAPTAGLHF LL ++ + G + +VTLHVGAGTF PVKV++
Sbjct: 160 ADKERYQTVYNQKPGAVAAPTAGLHFDDVLLDKIKAKGAEFAYVTLHVGAGTFQPVKVDN 219
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-----INPW 289
+DH MH+E + A+N+ K+RGGRI++VGTTS+R LE+A +D + + P+
Sbjct: 220 INDHHMHAEYVEVPQEVVDAINATKARGGRIIAVGTTSVRSLESA-AQDALKKGSELVPF 278
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
G T IFI PGY ++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ + YRF+S
Sbjct: 279 FGDTEIFIYPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYENTMNAYKHAVENKYRFFS 338
Query: 350 YGDTSLLFQK 359
YGD+ + +K
Sbjct: 339 YGDSMFIKKK 348
>gi|313679722|ref|YP_004057461.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Oceanithermus profundus DSM 14977]
gi|313152437|gb|ADR36288.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Oceanithermus profundus DSM 14977]
Length = 339
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 144/354 (40%), Positives = 198/354 (55%), Gaps = 23/354 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++++D+ LP RIA PRD +RLMVV V + +LP FL + D +VFN
Sbjct: 8 IEDYDYPLPEERIAQEGASPRDHSRLMVVERGRG---VRAHARFFELPRFLRAGDLLVFN 64
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
TKVI A++ GV+ + L +P W RP + ++ G + F G
Sbjct: 65 ETKVIPARIFGVKEGGAR-----VEALLVREEAPERWWAMVRPGRRLRPGARVRF----G 115
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ E +D + G LLVFS L + +G PLPPYI RP+D Y QT
Sbjct: 116 ELAAEVAAVD--DEGLRLLVFSGPVRPL---LERLGRTPLPPYI--HRPVDPERY---QT 165
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ +GSVAAPTAGLHFT LL L ++G++ V LHVG GTF PVK ++H MH+
Sbjct: 166 VYARREGSVAAPTAGLHFTPRLLEELAAMGVEQARVVLHVGPGTFQPVK-GAIEEHRMHA 224
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E + A A +N + G R+V+VGTT +R LE A + P +G T +FI P YR
Sbjct: 225 ERYEVPAEAAARVNRALAEGRRVVAVGTTVVRTLEAAFAPGEGVRPGAGETRLFIRPPYR 284
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
F+ V L++NFHLP+STLLMLV+AF G E T Y+ A++ YRF+S GD ++
Sbjct: 285 FQVVGGLVTNFHLPRSTLLMLVAAFAGYEVTMAAYREALARDYRFFSLGDAMVI 338
>gi|254506743|ref|ZP_05118883.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
parahaemolyticus 16]
gi|219550324|gb|EED27309.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
parahaemolyticus 16]
Length = 360
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 146/371 (39%), Positives = 211/371 (56%), Gaps = 35/371 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N + D +D+ + D +V
Sbjct: 11 MQVSDFHFDLPDELIARYPQPERTASRLLQMDGNTG---ELVDGTFTDVLEQVQPGDLVV 67
Query: 61 FNNTKVITAQLNGVRFCHINRREK--EISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
FNNT+VI A++ G R+E ++ + + S + R SK K G +
Sbjct: 68 FNNTRVIPARMFG-------RKESGGKLEVLVERVLDEKSILAHVRCSKSPKPGTTIFIG 120
Query: 119 SQDGQS-----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
D S R +A K+N + +L + +G +PLPPYI RP +
Sbjct: 121 ENDEYSAEMVARHDALFELKFNAEQNVLAV----------LEEIGHMPLPPYI--DRPDE 168
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT Y + G+VAAPTAGLHF LL ++ + G++ +VTLHVGAGTF PVKV+
Sbjct: 169 DSDKERYQTVYNEKPGAVAAPTAGLHFDEPLLEKIKAKGVEFAYVTLHVGAGTFQPVKVD 228
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-----INP 288
+ ++H MH+E + A+N+ K+RGGRI++VGTTS+R LE+A +D I + P
Sbjct: 229 NINEHHMHAEYVEVPQEVVDAINATKARGGRIIAVGTTSVRSLESA-AQDAIKKGTELAP 287
Query: 289 WSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
+ G T IFI PGY ++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ + YRF+
Sbjct: 288 FFGDTEIFIFPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYENTMNAYKHAVENKYRFF 347
Query: 349 SYGDTSLLFQK 359
SYGD+ + +K
Sbjct: 348 SYGDSMFIKKK 358
>gi|150024349|ref|YP_001295175.1| S-adenosylmethionine:tRNA-ribosyltransferase-iso merase
[Flavobacterium psychrophilum JIP02/86]
gi|166216722|sp|A6GW82|QUEA_FLAPJ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|149770890|emb|CAL42355.1| S-adenosylmethionine:tRNA-ribosyltransferase-iso merase
[Flavobacterium psychrophilum JIP02/86]
Length = 349
Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 141/363 (38%), Positives = 198/363 (54%), Gaps = 22/363 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F F+LP +A P RD +RLMVV+ I + D+ + + D +V
Sbjct: 1 MKLSHFQFNLPDELLAEYPAENRDESRLMVVN---RAKGTIEHKMFKDVLDYFDEGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREK-----EISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
NNTKV A+L G +EK E+ + W V P++ I+ G+ L
Sbjct: 58 LNNTKVFPARLYG-------NKEKTGARIEVFLLRELNAEQRLWDVLVDPARKIRIGNKL 110
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPID 173
+F D L A VID + L F G E +++ +G P+P YI+R+ +
Sbjct: 111 YFGDDDS---LVAEVIDNTTSRGRTLRFLYDGSYEEFRNKLTELGETPIPKYISRE--VT 165
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT YAK +G+VAAPTAGLHF+ +L+ RL GI+ VTLHVG GTF PV+VE
Sbjct: 166 PEDAERYQTIYAKEEGAVAAPTAGLHFSKHLMKRLEIKGIQFAEVTLHVGLGTFNPVEVE 225
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
D H M SE I +N+ K R RI +VGTTS+R +E++ + +NP+ G+T
Sbjct: 226 DLSKHKMDSEELKITQEACDIVNAAKERKSRICAVGTTSMRAIESSVSSARTLNPYDGWT 285
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
N FI P + F +++NFH PKSTL+M++SAFCG + K+ Y AI Y+FYSYGD
Sbjct: 286 NKFIFPPHDFSLATCMITNFHTPKSTLMMMISAFCGHDLMKEAYAEAIKEKYKFYSYGDA 345
Query: 354 SLL 356
L+
Sbjct: 346 MLI 348
>gi|94985052|ref|YP_604416.1| queuosine biosynthesis protein [Deinococcus geothermalis DSM 11300]
gi|94555333|gb|ABF45247.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Deinococcus geothermalis DSM 11300]
Length = 366
Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 146/350 (41%), Positives = 197/350 (56%), Gaps = 19/350 (5%)
Query: 8 FDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVI 67
FDLPP RIA PRD++RLMVV I+ + +LP L + D +VFN ++VI
Sbjct: 27 FDLPPERIAQTGAEPRDASRLMVVGREH-----IAHRIFRELPELLRAGDVLVFNESRVI 81
Query: 68 TAQLNGVR-FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRL 126
A++ + +I L N WS Y +P+K + G L GQ R
Sbjct: 82 PARVLARKPVTEGGFGGGQIEVLLLREEEQNVWSAYLKPAK--RAGKELWL----GQHRA 135
Query: 127 EATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAK 186
E T + G LL F +++ + +G +PLPPYI + D R YQT YA+
Sbjct: 136 EVTGV--LPDGARLLRFDH---DIKPHLDEIGRLPLPPYI-QAGDSDERWRERYQTVYAR 189
Query: 187 IQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGF 246
GSVAAPTAGLHFT LL+RL ++G++ + +TLHVGAGTF P+ DH+MH+E
Sbjct: 190 EPGSVAAPTAGLHFTPELLARLDALGVERHALTLHVGAGTFRPI-TGSVADHVMHAERYA 248
Query: 247 IDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAV 306
I A A+N K G R+++VGTT++R LE++ DG +NP G T IFI PG R
Sbjct: 249 ISETVAAAINRAKVEGRRVIAVGTTTVRALESSANADGTVNPGEGETRIFILPGVPVRVP 308
Query: 307 DILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
D+L++N HLP STLL+LV+AF G E + Y A+ YRFYS GD LL
Sbjct: 309 DLLITNLHLPGSTLLLLVAAFAGEERIRAAYDAALVGDYRFYSLGDAMLL 358
>gi|225018503|ref|ZP_03707695.1| hypothetical protein CLOSTMETH_02450 [Clostridium methylpentosum
DSM 5476]
gi|224948704|gb|EEG29913.1| hypothetical protein CLOSTMETH_02450 [Clostridium methylpentosum
DSM 5476]
Length = 340
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 138/352 (39%), Positives = 194/352 (55%), Gaps = 17/352 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F FDLP IA P+ PRD +R++ + N ++ D+ L D +V
Sbjct: 1 MNTSDFYFDLPKELIAQTPIEPRDHSRMLCLDRNTG---KLAHKHFYDVVDLLEPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+++V+ A+L G + +I L + + W + +P K K G F
Sbjct: 58 INDSRVLPARLYGKK----QGTGSDIEFLLLEQKQQDVWEILCKPGKKAKVGAKFTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L+A +I+ + G + F+ G + + +G +PLPPYI K R Y
Sbjct: 111 --GGLLDAEIIEVCDDGNRIAKFTYDGSFFDI-LDQIGQMPLPPYITEKLEDKER----Y 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA GS AAPTAGLHFT LL +L + G+ + VTLHVG GTF PVKV+D H M
Sbjct: 164 QTVYADELGSAAAPTAGLHFTPELLGKLENKGVNIARVTLHVGLGTFRPVKVDDVTKHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I TA +N K+ G R+++VGTTS R LE+ T G I G+T+IFI PG
Sbjct: 224 HSEHYAISQETADLINRTKANGKRVIAVGTTSCRTLESVATFTGGIQKAEGYTDIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
Y F+ +D L++NFHLP+STL+MLVSAF G ++ + Y A+ YRF+S+GD
Sbjct: 284 YEFKVLDGLITNFHLPESTLIMLVSAFAGYDQVMEAYHTAVQERYRFFSFGD 335
>gi|153838068|ref|ZP_01990735.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
parahaemolyticus AQ3810]
gi|149748535|gb|EDM59394.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
parahaemolyticus AQ3810]
Length = 350
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 146/370 (39%), Positives = 214/370 (57%), Gaps = 33/370 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N + D +D+ + + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQPERTASRLLQMDGNTG---ELIDGTFTDVLNQVQAGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCH------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
FNNT+VI A++ G + + R E S H+R S + +P I G+
Sbjct: 58 FNNTRVIPARMFGRKESGGKLEVLVERMLDEKSILAHVRCSKSP-----KPGTTIIVGEN 112
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
+ S + +R +A K+N+ + +L + +G +PLPPYI RP +
Sbjct: 113 DEY-SAEMVARHDALFELKFNSDKTVLEI----------LEEIGHMPLPPYI--DRPDED 159
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D YQT Y + G+VAAPTAGLHF LL ++ + G + +VTLHVGAGTF PVKV++
Sbjct: 160 ADKERYQTVYNQKPGAVAAPTAGLHFDDVLLDKIKAKGAEFAYVTLHVGAGTFQPVKVDN 219
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-----INPW 289
+DH MH+E + A+N+ K+RGGRI++VGTTS+R LE+A +D + + P+
Sbjct: 220 INDHHMHAEYVEVPQEVVDAINATKARGGRIIAVGTTSVRSLESA-AQDALKKGTELVPF 278
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
G T IFI PGY ++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ + YRF+S
Sbjct: 279 FGDTEIFIYPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYENTMNAYKHAVENKYRFFS 338
Query: 350 YGDTSLLFQK 359
YGD+ + +K
Sbjct: 339 YGDSMFIKKK 348
>gi|295096812|emb|CBK85902.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterobacter cloacae subsp. cloacae NCTC 9394]
Length = 356
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 149/360 (41%), Positives = 210/360 (58%), Gaps = 27/360 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R S RL+ +L P H +DL LN D +
Sbjct: 1 MRVADFSFELPESLIAHYPMPERSSCRLL----SLDGPTGALTHGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEVLVERMLDDKRILAHIRASKAPKPGAEL--LL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARKRPIDAR 175
D +S ++AT+ + + +F + ER + + +G +PLPPYI +RP +
Sbjct: 110 GDDES-IKATMTARHDA-----LFEVE-FNDERTVLDILNAIGHMPLPPYI--ERPDEEA 160
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y++ G+VAAPTAGLHF LL +L + GI++ FVTLHVGAGTF PV+V+
Sbjct: 161 DRELYQTVYSQKPGAVAAPTAGLHFDEPLLEKLRAKGIEMAFVTLHVGAGTFQPVRVDSI 220
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFT 293
+DHIMHSE + A+ + K+RG R+V+VGTTS+R LE+A + +I P+ G T
Sbjct: 221 EDHIMHSEYAEVPQEVVDAVLAAKARGNRVVAVGTTSVRSLESAAQAAKSELIEPFFGDT 280
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFI PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD
Sbjct: 281 QIFIYPGYQYKVIDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKSAVEQKYRFFSYGDA 340
>gi|89072679|ref|ZP_01159244.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Photobacterium sp. SKA34]
gi|89051499|gb|EAR56953.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Photobacterium sp. SKA34]
Length = 350
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 150/369 (40%), Positives = 210/369 (56%), Gaps = 31/369 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDFDLP IA P R ++RL+ + N ++ D+ + + D +V
Sbjct: 1 MQVSDFDFDLPDELIARYPQPERTASRLLQMTGNTGE---LAHKGFKDVLDLVQAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF--- 117
FNNT+VI A++ F H K I + + S + R SK K G+ L
Sbjct: 58 FNNTRVIPARM----FGHKASGGK-IEVLVERMLDDKSILAHVRASKPPKPGNELLLGEN 112
Query: 118 --FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
FS + +R +A ++N+ + +L + VG +PLPPYI RP +
Sbjct: 113 GEFSAEMVARHDALFEIRFNSDKTVLEI----------LDAVGHMPLPPYI--DRPDEDT 160
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y G+VAAPTAGLHF L++ L + G+ FVTLHVGAGTF PV+V+D
Sbjct: 161 DKERYQTVYNTKPGAVAAPTAGLHFDDKLMANLKAKGVNFAFVTLHVGAGTFQPVRVDDI 220
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN-----PWS 290
+DH MHSE + A+N ++ GGRI++VGTTS+R LE+A +D I N P+
Sbjct: 221 NDHHMHSEYVEVPEEVVTAVNETRANGGRIIAVGTTSVRSLESA-AQDAIKNCTEFKPFF 279
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G T IFI PGY+F+ VD L++NFHLP+STL+MLVSAF G E T Y A+++ YRF+SY
Sbjct: 280 GDTEIFIYPGYQFQLVDALITNFHLPESTLIMLVSAFAGYENTMNAYHEAVANRYRFFSY 339
Query: 351 GDTSLLFQK 359
GD+ + +K
Sbjct: 340 GDSMFITRK 348
>gi|309972610|gb|ADO95811.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queuosine
biosynthesis protein) [Haemophilus influenzae R2846]
Length = 363
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 142/364 (39%), Positives = 209/364 (57%), Gaps = 19/364 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R S RL+ ++ IS SD+ ++ D ++
Sbjct: 1 MRVSDFNFDLPDELIARYPKIDRVSCRLLQLNGENG---EISHRTFSDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + + R SK K+G L F +
Sbjct: 58 FNNTRVIPARMFGRKASG-----GKIEVLVERMLDEHRFLAHIRSSKSPKEGAEL-FLGE 111
Query: 121 D--GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
D G++ V+ + + S L + +G +PLPPYI RP + D
Sbjct: 112 DKLGENNGIKAVMKARHDALFEVELSDKSTALLDVLQTIGHMPLPPYI--DRPDEEADQE 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y+K+ G+VAAPTAGLHF NLL +L + G+ FVTLHVGAGTF PV+VE+ +DH
Sbjct: 170 CYQTVYSKVPGAVAAPTAGLHFDENLLEKLKAKGVNFEFVTLHVGAGTFQPVRVENIEDH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTED----GIINPWSGF 292
+MH+E + A+ + K G R+++VGTTS+R +E+A + E+ +I P+
Sbjct: 230 VMHAEYVEVSQEVCNAIIATKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSD 289
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + T Y+ A+ + YRF+SYGD
Sbjct: 290 TSIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKSAVENHYRFFSYGD 349
Query: 353 TSLL 356
+
Sbjct: 350 AMFI 353
>gi|225850942|ref|YP_002731176.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Persephonella marina EX-H1]
gi|225644878|gb|ACO03064.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Persephonella marina EX-H1]
Length = 337
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 148/355 (41%), Positives = 202/355 (56%), Gaps = 25/355 (7%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
++D+ LP IA PV PRDS RLMV++ I + D+ +L D +V N+T
Sbjct: 6 DYDYRLPKELIAKYPVEPRDSCRLMVLNRKERT---IEHRIFRDIGDYLKEGDLLVLNDT 62
Query: 65 KVITAQLNGVRFCHINRRE--KEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
KVI A+L I R+E +I L V+ N W + K +K+G ++ S+D
Sbjct: 63 KVIPARL-------IGRKETGAKIEIFLLKPVTENVWEALIKNIKRLKEGQVV-IISEDF 114
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ +L ++K + G+ V + G +++ I G IPLPPYI R+ RDY YQT
Sbjct: 115 RVKL----LEKLDEGKA--VVQLVGEDIKYLIEKYGHIPLPPYIEREDEDKDRDY--YQT 166
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
+AK +G+VA+PTAGLHFT LL +L GIK FVTLHVG GTF P+ VED H MH
Sbjct: 167 VFAKKEGAVASPTAGLHFTEELLEKLKEKGIKTAFVTLHVGLGTFRPITVEDITKHKMHE 226
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I T + K RG +V+VGTT +R LET GF++IFI P Y
Sbjct: 227 EFYQIPEETLDLIRETKERGRSVVAVGTTVVRTLETYAQ----TGKKEGFSDIFIYPPYD 282
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+ VD +++NFHLPKSTLL+LVSAF G + + Y+ A+ YRF+SYGD L+
Sbjct: 283 FKIVDSMITNFHLPKSTLLLLVSAFAGRDFILEAYREAVEKRYRFFSYGDAMLIL 337
>gi|85860046|ref|YP_462248.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Syntrophus
aciditrophicus SB]
gi|123517112|sp|Q2LVG6|QUEA_SYNAS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|85723137|gb|ABC78080.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Syntrophus
aciditrophicus SB]
Length = 362
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 146/376 (38%), Positives = 210/376 (55%), Gaps = 36/376 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++FD+ LP SRIA P RD AR+MV+ + + D P F+ D +V
Sbjct: 2 MKLQDFDYQLPQSRIAQSPCAKRDHARMMVLDRRIGS---LEHRHFYDFPDFVRKGDVLV 58
Query: 61 FNNTKVITAQLNG-------VRFCHINRR-------EKEISCTLHMRVS-PNSWSVYARP 105
N++KVI A+L+G + ++R E + + RV +W +P
Sbjct: 59 INDSKVIPARLSGRKETGSRIELLLLSRYSDSPAVPETDSTEWPFFRVGVEETWEALLKP 118
Query: 106 SKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPY 165
K I+ G + F D SR ATVI++ N + LL F+ + + + + G PLPPY
Sbjct: 119 GKRIRIGTSIFF---DDHSR--ATVIERINEKKWLLTFN-TALPFDLFLQRYGKAPLPPY 172
Query: 166 IARKR-----PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTL 220
I R++ P D RD YQT YA+ GS+AAPTAG HF+ L L + I + VTL
Sbjct: 173 IKREKKNAQMPED-RD--RYQTIYARSPGSIAAPTAGFHFSEALFKTLRELEIVIAPVTL 229
Query: 221 HVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT 280
HVG GTF P++ ED +DH+M E I ++ +NS + R+++VGTTS R+LE+A
Sbjct: 230 HVGFGTFTPIETEDVEDHVMEVESFSISPESSDKINSAE----RVIAVGTTSTRVLESAA 285
Query: 281 TEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHA 340
E G ++P SG + +FI PGYRF+ V L++NFHLPKS+L +L AF G + ++ Y A
Sbjct: 286 DEQGRVHPMSGQSRLFIYPGYRFKRVQALLTNFHLPKSSLFLLACAFAGKDRIQQAYATA 345
Query: 341 ISHAYRFYSYGDTSLL 356
I YRFYSYGD L+
Sbjct: 346 IQEEYRFYSYGDCMLI 361
>gi|325283310|ref|YP_004255851.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Deinococcus
proteolyticus MRP]
gi|324315119|gb|ADY26234.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Deinococcus
proteolyticus MRP]
Length = 358
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 143/351 (40%), Positives = 201/351 (57%), Gaps = 16/351 (4%)
Query: 8 FDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVI 67
F+LPP RIA PRDS+RLM V P + H+ +LP L + D +VFN ++VI
Sbjct: 14 FELPPGRIAQTGAEPRDSSRLMRV-PRAGE---VQHHIFRELPELLRAGDVLVFNQSRVI 69
Query: 68 TAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG-QSRL 126
A++ + + +I L N WS Y +P++ + G+ L G Q R
Sbjct: 70 PARVMARKPKVGGQGGGQIEVMLLREEENNVWSAYLKPAR--RAGNELWLGDPAGVQHRA 127
Query: 127 EATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD-YQTTYA 185
E V+ G LL F +++ + +G +PLPPYI D + + YQT YA
Sbjct: 128 E--VVGVQEDGARLLRFDH---DIKPHLDDIGRLPLPPYIEAGE--DDTVWCERYQTVYA 180
Query: 186 KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIG 245
+ GSVAAPTAGLHFT LL RL ++G++ + VTLHVGAGTF PV+ +H+MH+E
Sbjct: 181 RENGSVAAPTAGLHFTPELLERLRALGVEQHAVTLHVGAGTFKPVQGA-VSEHVMHAEQY 239
Query: 246 FIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRA 305
I TA A+N ++ G R+V+VGTT++R LE++ G + G T IFITPG +
Sbjct: 240 HIPPATADAINRARAEGRRVVAVGTTTVRALESSVDGGGEVRAGKGDTRIFITPGQAVQV 299
Query: 306 VDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
D+L++N HLP STL++LV+AF G+E + Y A+ H YRFYS GD LL
Sbjct: 300 PDLLITNLHLPDSTLMLLVAAFAGVERIQTAYAEALRHDYRFYSLGDAMLL 350
>gi|269792529|ref|YP_003317433.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Thermanaerovibrio acidaminovorans DSM 6589]
gi|269100164|gb|ACZ19151.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Thermanaerovibrio acidaminovorans DSM 6589]
Length = 348
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 148/366 (40%), Positives = 211/366 (57%), Gaps = 37/366 (10%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+V +D+ LP IA PV PRDS+RLMV+ + + + DL FL D +V
Sbjct: 8 LVDSYDYHLPEESIAQSPVEPRDSSRLMVIRRSDGS---VCHRIFRDLVDFLRPGDLLVM 64
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP-----NSWSVYARPSKVIKKGDILH 116
N+T+V+ A+L G R+E S + + +SP ++W+ RP + ++ G ++
Sbjct: 65 NDTRVMRARLLG-------RKESGGSVEVFL-LSPLDESRSAWTGMVRPGRKVRPGTVVR 116
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVF-SISGIELERQISLVGTIPLPPYIARKRPIDAR 175
F G A + ++ G L+ F SG E+ R + G +PLPPYI R +D
Sbjct: 117 FSEDPGHL---AVIQERLPDGLRLVHFPGESGWEIARTL---GEVPLPPYIE-NRQVDGE 169
Query: 176 DYVDYQTTYA--KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
Y QT Y+ + SVA+PTAGLHFT LLS L S G+ FVTL+VG GTF PVK +
Sbjct: 170 RY---QTVYSDPSKELSVASPTAGLHFTRELLSELESRGVGRTFVTLNVGLGTFRPVKAQ 226
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSG-- 291
DH+MH E + A +A+ + VK+RG R+V+VGTT +R LE+ INP G
Sbjct: 227 RASDHVMHLETCLVSADSARMIREVKARGNRVVAVGTTVVRTLESYA-----INPLEGEP 281
Query: 292 -FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
T++FI PG+RFR VD +++NFHLP+STLLMLV+AF G + Y+ A++ YRF+S+
Sbjct: 282 FETDLFIRPGFRFRVVDAMITNFHLPRSTLLMLVAAFGGYDTVMGAYREAVARGYRFFSF 341
Query: 351 GDTSLL 356
GD LL
Sbjct: 342 GDAMLL 347
>gi|302185766|ref|ZP_07262439.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. syringae 642]
Length = 354
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 153/367 (41%), Positives = 205/367 (55%), Gaps = 42/367 (11%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R S+RL+ L P ++ +DL L D +
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLL----TLDGPTGALAHRQFTDLLEHLRPGDLM 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDIL-HFF 118
VFNNT+VI A+L G +K L + V +V+ +L H
Sbjct: 57 VFNNTRVIPARLFG---------QKASGGKLEILVE-----------RVLDSHRVLAHVR 96
Query: 119 SQDGQSRLEATVIDKWNTGEILL----VFSISGIE-----LERQISLVGTIPLPPYIARK 169
S + +ID E++ +F + E LER VG +PLPPYI
Sbjct: 97 SSKSPKPGSSILIDGGGEAEMVARHDALFELRFAEEVLPLLER----VGHMPLPPYI--D 150
Query: 170 RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
RP + D YQT YA+ G++AAPTAGLHF LL + + G++ FVTLHVGAGTF P
Sbjct: 151 RPDEGADRERYQTVYAQRAGALAAPTAGLHFDQPLLEAIAAKGVETAFVTLHVGAGTFQP 210
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPW 289
V+VE +DH MHSE + A+ + ++RGGR+++VGTTS+R LE+A DG++ P+
Sbjct: 211 VRVEQIEDHHMHSEWLEVGQDVVDAVAACRARGGRVIAVGTTSVRSLESA-ARDGVLKPF 269
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
SG T+IFI PG F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+S
Sbjct: 270 SGDTDIFIYPGRPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFS 329
Query: 350 YGDTSLL 356
YGD +
Sbjct: 330 YGDAMFI 336
>gi|126662382|ref|ZP_01733381.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Flavobacteria bacterium BAL38]
gi|126625761|gb|EAZ96450.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Flavobacteria bacterium BAL38]
Length = 349
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 142/363 (39%), Positives = 198/363 (54%), Gaps = 22/363 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F F+LP +A P RD +RLMVV+ I L D+ + + D +V
Sbjct: 1 MKLSHFQFNLPEELLAEFPTENRDESRLMVVNRKTG---TIEHKLFKDVIDYFDDGDVMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREK-----EISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
NNTKV A+L G +EK E+ + W V P++ I+ G+ L
Sbjct: 58 LNNTKVFPARLYG-------NKEKTGARIEVFLLRELNAEQRLWDVLVDPARKIRIGNKL 110
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPID 173
+F D L A VID + L F G E ++ +G P+P YI R+ +
Sbjct: 111 YFGDDDS---LVAEVIDNTTSRGRTLRFLYDGSYEEFREKLVELGETPIPKYINRE--VT 165
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT YAK++G+VAAPTAGLHF+ +LL RL G+ VTLHVG GTF PV+VE
Sbjct: 166 PEDAERYQTIYAKVEGAVAAPTAGLHFSKHLLKRLEIKGVDFAEVTLHVGLGTFNPVEVE 225
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
D H M SE I +N+ K++ ++ VGTT++R +E++ + +NP+ G+T
Sbjct: 226 DLSKHKMDSEEMKISQEACDIINNAKTKKKKVCCVGTTAMRAMESSVSSQRTLNPFEGWT 285
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
N FI P Y F D +++NFH PKSTLLM++SAFCG + KK Y+ A+ YRFYSYGD
Sbjct: 286 NKFIYPPYDFSLADAMITNFHTPKSTLLMMISAFCGHDLMKKAYEEAVKEKYRFYSYGDA 345
Query: 354 SLL 356
L+
Sbjct: 346 MLI 348
>gi|312884249|ref|ZP_07743958.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
caribbenthicus ATCC BAA-2122]
gi|309368022|gb|EFP95565.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
caribbenthicus ATCC BAA-2122]
Length = 351
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 147/369 (39%), Positives = 210/369 (56%), Gaps = 31/369 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N + D D+ A + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPQPERTASRLLQLDGNSGD---LKDGTFVDVLAQVQPGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCH------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
FNNT+VI A++ G + + R E S H+R S + +P I G+
Sbjct: 58 FNNTRVIPARMFGRKESGGKLEVLVERVLDEKSILAHVRCSKSP-----KPGSTIFVGEH 112
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
F +Q +R +A K+N+ + +L + +G +PLPPYI RP +
Sbjct: 113 DEFSAQ-MVARHDALFELKFNSDQNVLSV----------LEQIGHMPLPPYI--DRPDED 159
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D YQT Y + G+VAAPTAGLHF +L +L G+++ +VTLHVGAGTF PVKV++
Sbjct: 160 SDKERYQTVYNQKPGAVAAPTAGLHFDELMLEKLAQKGVELAYVTLHVGAGTFQPVKVDN 219
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT----TEDGIINPWS 290
DH MH+E + A A+ + K+RGGRI++VGTTS+R LE+A T + P+
Sbjct: 220 IHDHHMHAEYVEVPASVIDAIKATKARGGRIIAVGTTSVRSLESAAQHALTNGTELAPFF 279
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G T IFI PGY ++ VD L++NFHLP+STL+MLVSAF G E T Y HA+ + YRF+SY
Sbjct: 280 GDTEIFIYPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYENTMNAYHHAVKNNYRFFSY 339
Query: 351 GDTSLLFQK 359
GD+ + +K
Sbjct: 340 GDSMFIKKK 348
>gi|67923312|ref|ZP_00516795.1| Queuosine biosynthesis protein [Crocosphaera watsonii WH 8501]
gi|67854835|gb|EAM50111.1| Queuosine biosynthesis protein [Crocosphaera watsonii WH 8501]
Length = 361
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 148/366 (40%), Positives = 207/366 (56%), Gaps = 25/366 (6%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D+ LP IA PV PRD++RL+V++ P + DLP +L D +VF
Sbjct: 6 LLSSYDYYLPQELIAQNPVIPRDNSRLLVIN----SPENHIHSVFRDLPQWLLPGDLLVF 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF-FSQ 120
NNT+VI A+L G + + L P W +P K K G ++F
Sbjct: 62 NNTRVIPARLYGAKSTG-----APVEILLLEEKEPFCWLALVKPGKRFKIGSEIYFRLDD 116
Query: 121 DGQSRLEATVIDK-WNTGEILLVFSISGIEL-ERQISLVGTIPLPPYIARKRPIDARDYV 178
D + L ATV+D+ TG LL F + ++L ++I +G IP PPY+ DA+
Sbjct: 117 DEDNFLVATVVDRDEETGGRLLKFQVDSLDLFWQKIEEIGQIPFPPYVTES---DAKP-S 172
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YA+ G+VAAPTAGLHFT LL L GI ++TLHVG GTF PV +++ +H
Sbjct: 173 QYQTIYAQKPGAVAAPTAGLHFTEELLENLQQKGINQAYITLHVGLGTFRPVDIDNIKEH 232
Query: 239 IMHSEIGFIDAPT--AQALNSVKSRGGRIVSVGTTSLRLLE---TATTEDGI--INPWSG 291
MH E +I+ P + + K+ GGR+++VGTT +R LE AT G + + G
Sbjct: 233 KMHQE--WIEVPEIIVEKIKETKANGGRVIAVGTTVVRALEGTAKATEMAGKQELMEFRG 290
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T+IFI PGY + +D L++NFHLPKS+LLMLVSA G E ++YQ AI YRFYS+G
Sbjct: 291 KTDIFIYPGYSWCVIDGLITNFHLPKSSLLMLVSALIGRERLLELYQIAIEEKYRFYSFG 350
Query: 352 DTSLLF 357
D L+
Sbjct: 351 DGMLIL 356
>gi|68248853|ref|YP_247965.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae 86-028NP]
gi|81336732|sp|Q4QNU2|QUEA_HAEI8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|68057052|gb|AAX87305.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae 86-028NP]
Length = 363
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 142/364 (39%), Positives = 208/364 (57%), Gaps = 19/364 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R S RL+ ++ I SD+ ++ D ++
Sbjct: 1 MRVSDFNFDLPDELIARYPKTDRVSCRLLQLNGENG---EIFHRTFSDVLDLIDQGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT VI A++ G + +I + + + + + R SK K+G L F +
Sbjct: 58 FNNTHVIPARMFGRKASG-----GKIEVLVERMLDEHRFLAHIRSSKSPKEGAEL-FLGE 111
Query: 121 D--GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
D G++ V+ ++ + S L + +G +PLPPYI RP + D
Sbjct: 112 DKLGENNGIKAVMKARHSSLFEVELSDKSTALLDVLQTIGHMPLPPYI--DRPDEEADKE 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y+K+ G+VAAPTAGLHF NLL +L + G+ FVTLHVGAGTF PV+VE+ +DH
Sbjct: 170 CYQTVYSKVPGAVAAPTAGLHFDKNLLEKLKAKGVNFEFVTLHVGAGTFQPVRVENIEDH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTED----GIINPWSGF 292
+MH+E + A+ + K G R+++VGTTS+R +E+A + E+ +I P+
Sbjct: 230 VMHAEYVEVSQEVCNAIIATKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSD 289
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + T Y+HA+ YRF+SYGD
Sbjct: 290 TSIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKHAVQEKYRFFSYGD 349
Query: 353 TSLL 356
+
Sbjct: 350 AMFI 353
>gi|89256118|ref|YP_513480.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. holarctica LVS]
gi|156502136|ref|YP_001428201.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. holarctica FTNF002-00]
gi|167010805|ref|ZP_02275736.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. holarctica FSC200]
gi|290953183|ref|ZP_06557804.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. holarctica URFT1]
gi|295313598|ref|ZP_06804186.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. holarctica URFT1]
gi|122500926|sp|Q2A472|QUEA_FRATH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|167016407|sp|A7NB92|QUEA_FRATF RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|89143949|emb|CAJ79168.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. holarctica LVS]
gi|156252739|gb|ABU61245.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. holarctica FTNF002-00]
Length = 338
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 135/357 (37%), Positives = 210/357 (58%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LP IA P+ RD++RL+ ++ I+D+ +D F+N D +V
Sbjct: 1 MKTDDFDYKLPEELIASYPLENRDASRLLKLNKQTGE---IADYKFTDFIDFINPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV+ A+L G + ++ + +P + + + ++ G ++
Sbjct: 58 FNNSKVMLARLYGSKTTG-----AKLEYLIERIKNPKLFETHIKANRSPAIGSEIYV--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ L A V+DK G + L+ ++ + + G IPLPPY+ KR + D Y
Sbjct: 110 --EDTL-AKVLDK--DGGMYLLEIQGDKDIYQLMEEFGHIPLPPYM--KRDDEEFDAERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GSVAA TAGLHF+ L+ ++ G+ + ++TLHVG+GTF PV+V+D + H M
Sbjct: 163 QTVYAQDLGSVAALTAGLHFSKELMQQIKDKGVDIAYITLHVGSGTFKPVQVDDVESHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E+ + Q + K GGR++++GTTS+R LETA ++G I P+ G T+IF+ PG
Sbjct: 223 HAEVISVPVEVCQKIRQTKENGGRVITIGTTSVRSLETA-GQNGQIEPYQGETDIFLYPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F VD +++NFHLPKSTL+MLVSAF E+ K Y+HAI+ YRF+SYGD +F
Sbjct: 282 KKFNVVDAMITNFHLPKSTLIMLVSAFADKEKIIKAYEHAIAERYRFFSYGDAMFIF 338
>gi|330975882|gb|EGH75948.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. aptata str. DSM 50252]
Length = 354
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 154/367 (41%), Positives = 205/367 (55%), Gaps = 42/367 (11%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R S+RL+ L P ++ +DL L D +
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLL----TLDGPTGALAHRQFTDLLEHLRPGDLM 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDIL-HFF 118
VFNNT+VI A+L G +K+ L + V +V+ +L H
Sbjct: 57 VFNNTRVIPARLFG---------QKDSGGKLEILVE-----------RVLDSHRVLAHVR 96
Query: 119 SQDGQSRLEATVIDKWNTGEILL----VFSISGIE-----LERQISLVGTIPLPPYIARK 169
S + +ID E++ +F + E LER VG +PLPPYI
Sbjct: 97 SSKSPKPGSSILIDGGGEAEMVARHDALFELRFAEEVLPLLER----VGHMPLPPYI--D 150
Query: 170 RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
RP + D YQT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF P
Sbjct: 151 RPDEGADRERYQTVYAQRAGAVAAPTAGLHFDQPLLDAIAAKGVETAFVTLHVGAGTFQP 210
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPW 289
V+VE +DH MHSE + A+ + ++RGGR+++VGTTS+R LE+A DG + P+
Sbjct: 211 VRVEQIEDHHMHSEWLEVGQDVVDAVAACRARGGRVIAVGTTSVRSLESA-ARDGELKPF 269
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
SG T+IFI PG F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+S
Sbjct: 270 SGDTDIFIYPGRPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFS 329
Query: 350 YGDTSLL 356
YGD +
Sbjct: 330 YGDAMFI 336
>gi|28897361|ref|NP_796966.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
parahaemolyticus RIMD 2210633]
gi|260364494|ref|ZP_05777115.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
parahaemolyticus K5030]
gi|260876322|ref|ZP_05888677.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
parahaemolyticus AN-5034]
gi|260898593|ref|ZP_05907089.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
parahaemolyticus Peru-466]
gi|31076904|sp|Q87S37|QUEA_VIBPA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|28805573|dbj|BAC58850.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
parahaemolyticus RIMD 2210633]
gi|308086874|gb|EFO36569.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
parahaemolyticus Peru-466]
gi|308093026|gb|EFO42721.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
parahaemolyticus AN-5034]
gi|308114696|gb|EFO52236.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
parahaemolyticus K5030]
Length = 350
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 146/370 (39%), Positives = 214/370 (57%), Gaps = 33/370 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N + D +D+ + + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQPERTASRLLQMDGNTG---ELIDGTFTDVLNQVQAGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCH------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
FNNT+VI A++ G + + R E S H+R S + +P I G+
Sbjct: 58 FNNTRVIPARMFGRKESGGKLEVLVERMLDEKSILAHVRCSKSP-----KPGTTIIVGEN 112
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
+ S + +R +A K+N+ + +L + +G +PLPPYI RP +
Sbjct: 113 DEY-SAEMVARHDALFELKFNSDKTVLDI----------LEEIGHMPLPPYI--DRPDED 159
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D YQT Y + G+VAAPTAGLHF LL ++ + G + +VTLHVGAGTF PVKV++
Sbjct: 160 ADKERYQTVYNQKPGAVAAPTAGLHFDDVLLDKIKAKGAEFAYVTLHVGAGTFQPVKVDN 219
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-----INPW 289
+DH MH+E + A+N+ K+RGGRI++VGTTS+R LE+A +D + + P+
Sbjct: 220 INDHHMHAEYVEVPQEVVDAINATKARGGRIIAVGTTSVRSLESA-AQDALKKGTELVPF 278
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
G T IFI PGY ++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ + YRF+S
Sbjct: 279 FGDTEIFIYPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYENTMNAYKHAVENKYRFFS 338
Query: 350 YGDTSLLFQK 359
YGD+ + +K
Sbjct: 339 YGDSMFIKKK 348
>gi|51102921|gb|AAT96070.1| QueA [Pseudomonas viridiflava]
Length = 354
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 149/362 (41%), Positives = 203/362 (56%), Gaps = 32/362 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP S IA P+ R S+RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFDLPDSLIARHPLAERRSSRLLTLD---GVSGALAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDIL-HFFS 119
FNNT+VI A+L G +K L + V +V+ +L H S
Sbjct: 58 FNNTRVIPARLFG---------QKASGGKLEILVE-----------RVLDSHRVLAHVRS 97
Query: 120 QDGQSRLEATVIDKWNTGEILL----VFSIS-GIELERQISLVGTIPLPPYIARKRPIDA 174
+ +ID E++ +F + E+ + VG +PLPPYI RP +
Sbjct: 98 SKSPKPGSSILIDGGGEAEMVARHDALFELRFAEEVLPLLDRVGHMPLPPYI--DRPDEG 155
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D YQT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF PV+VE
Sbjct: 156 ADRERYQTVYAERAGAVAAPTAGLHFDQPLLEAIAAKGVETTFVTLHVGAGTFQPVRVEQ 215
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
+DH MH+E + A+ + ++RGGR+++VGTTS+R LE+A DG++ P+SG T+
Sbjct: 216 IEDHHMHTEWLEVGQDVVDAVAACRARGGRVIAVGTTSVRSLESA-ARDGVLKPFSGDTD 274
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PG F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+SYGD
Sbjct: 275 IFIYPGRPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFSYGDAM 334
Query: 355 LL 356
+
Sbjct: 335 FI 336
>gi|292491982|ref|YP_003527421.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Nitrosococcus halophilus Nc4]
gi|291580577|gb|ADE15034.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Nitrosococcus halophilus Nc4]
Length = 350
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 144/357 (40%), Positives = 202/357 (56%), Gaps = 20/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F +DLP IA P R +RL+ + + D ++LPA L+ D +V
Sbjct: 7 MQLSDFSYDLPERLIAQYPPERRGESRLLFLD---GASGALRDQRFAELPALLSEGDLLV 63
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L GV+ ++ + + + + R SK + G L Q
Sbjct: 64 FNDTQVIPARLLGVKDSG-----GKVEVLIERILDQHRALAHVRASKPPRSGRRL-VLEQ 117
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKR-PIDARDYVD 179
+ + V D + L F + L + + VG +PLPPYI R+ PID Y
Sbjct: 118 SVEVEVGERVADLFE-----LRF-LDPRPLLQLLEAVGRMPLPPYIRRETTPIDRERY-- 169
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
QT YA G+VAAPTAGLHF LL +L + G+++ +VTLHVGAGTF PV+VE+ +H
Sbjct: 170 -QTVYASRPGAVAAPTAGLHFNGPLLEQLQAQGVELGYVTLHVGAGTFQPVRVENIAEHR 228
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH+E + + + GGR+V+VGTT++R LETA G I P+ G T IFI P
Sbjct: 229 MHAEYVEVPEQVCAQVRETQRLGGRVVAVGTTTVRALETAAA-GGAIAPYQGETEIFIFP 287
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GYRFRAVD L++NFHLP++TLLMLV AF G + Y+HA+ YRF+SYGD L+
Sbjct: 288 GYRFRAVDALITNFHLPETTLLMLVCAFAGRDRVLAAYRHAVKEGYRFFSYGDAMLV 344
>gi|145639843|ref|ZP_01795444.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae PittII]
gi|145271061|gb|EDK10977.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae PittII]
Length = 362
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 142/364 (39%), Positives = 209/364 (57%), Gaps = 19/364 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R S RL+ ++ IS SD+ ++ D ++
Sbjct: 1 MRVSDFNFDLPDELIARYPKIDRVSCRLLQLNGENG---EISHRTFSDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT VI A++ G + +I + + + + + R SK K+G L F +
Sbjct: 58 FNNTHVIPARMFGRK-----ASGGKIEVLVERMLDEHRFLAHIRSSKSPKEGTEL-FLGE 111
Query: 121 D--GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
D G++ V+ ++ + S L + +G +PLPPYI RP + D
Sbjct: 112 DKLGENNGIKAVMKARHSSLFEVELSDKSTALLDVLQTIGHMPLPPYI--DRPDEEADQE 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y+K+ G+VAAPTAGLHF NLL +L + G+ FVTLHVGAGTF PV+VE+ +DH
Sbjct: 170 CYQTVYSKVPGAVAAPTAGLHFDENLLEKLKAKGVNFEFVTLHVGAGTFQPVRVENIEDH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTED----GIINPWSGF 292
+MH+E + A+ + K G R+++VGTTS+R +E+A + E+ +I P+
Sbjct: 230 VMHAEYVEVSQEVCNAIIATKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSD 289
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + T Y+ A+ + YRF+SYGD
Sbjct: 290 TSIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKSAVENHYRFFSYGD 349
Query: 353 TSLL 356
+
Sbjct: 350 AMFI 353
>gi|289626174|ref|ZP_06459128.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. aesculi str. NCPPB3681]
gi|289649081|ref|ZP_06480424.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. aesculi str. 2250]
gi|298486003|ref|ZP_07004077.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
gi|298159480|gb|EFI00527.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
gi|330869599|gb|EGH04308.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. aesculi str. 0893_23]
gi|330950810|gb|EGH51070.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae Cit 7]
Length = 354
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 155/367 (42%), Positives = 204/367 (55%), Gaps = 42/367 (11%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R S+RL+ L P ++ +DL L D +
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLL----TLDGPTGALAHRQFTDLLEHLRPGDLM 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDIL-HFF 118
VFNNT+VI A+L G +K L + V +V+ +L H
Sbjct: 57 VFNNTRVIPARLFG---------QKASGGKLEILVE-----------RVLDSHRVLAHVR 96
Query: 119 SQDGQSRLEATVIDKWNTGEILL----VFSISGIE-----LERQISLVGTIPLPPYIARK 169
S + +ID E++ +F + E LER VG +PLPPYI
Sbjct: 97 SSKSPKPGSSILIDGGGEAEMVARHDALFELRFAEEVLPLLER----VGHMPLPPYI--D 150
Query: 170 RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
RP + D YQT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF P
Sbjct: 151 RPDEGADRERYQTVYAQRAGAVAAPTAGLHFDQPLLEAIAAKGVETAFVTLHVGAGTFQP 210
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPW 289
V+VE +DH MHSE + A+ + ++RGGR+V+VGTTS+R LE+A DG + P+
Sbjct: 211 VRVEQIEDHHMHSEWLEVGQDVVDAVAACRARGGRVVAVGTTSVRSLESA-ARDGELKPF 269
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
SG T+IFI PG F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+S
Sbjct: 270 SGDTDIFIYPGRPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFS 329
Query: 350 YGDTSLL 356
YGD +
Sbjct: 330 YGDAMFI 336
>gi|260582870|ref|ZP_05850655.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae NT127]
gi|260094083|gb|EEW77986.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae NT127]
Length = 363
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 142/364 (39%), Positives = 208/364 (57%), Gaps = 19/364 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R S RL+ ++ I SD+ ++ D ++
Sbjct: 1 MRVSDFNFDLPDELIARYPKTDRVSCRLLQLNGENG---EIFHRTFSDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT VI A++ G + +I + + + + + R SK K+G L F +
Sbjct: 58 FNNTHVIPARMFGRKASG-----GKIEVLVERMLDEHRFLAHIRSSKSPKEGAEL-FLGE 111
Query: 121 D--GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
D G++ V+ ++ + S L + +G +PLPPYI RP + D
Sbjct: 112 DKLGENNGIKAVMTARHSSLFEVELSDKSTALLDVLQTIGHMPLPPYI--DRPDEEADKE 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y+K+ G+VAAPTAGLHF NLL +L + G+ FVTLHVGAGTF PV+VE+ +DH
Sbjct: 170 CYQTVYSKVPGAVAAPTAGLHFDENLLEKLKAKGVNFEFVTLHVGAGTFQPVRVENIEDH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTED----GIINPWSGF 292
+MH+E + A+ + K G R+++VGTTS+R +E+A + E+ +I P+
Sbjct: 230 VMHAEYVEVSQEVCNAIIATKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSD 289
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + T Y+HA+ YRF+SYGD
Sbjct: 290 TSIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKHAVQEKYRFFSYGD 349
Query: 353 TSLL 356
+
Sbjct: 350 AMFI 353
>gi|146298270|ref|YP_001192861.1| queuosine biosynthesis protein [Flavobacterium johnsoniae UW101]
gi|189038522|sp|A5FMM5|QUEA_FLAJO RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|146152688|gb|ABQ03542.1| Queuosine biosynthesis protein [Flavobacterium johnsoniae UW101]
Length = 349
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 139/364 (38%), Positives = 198/364 (54%), Gaps = 22/364 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F+F+LP +A P RD +RLMV+ + I + D+ + + D ++
Sbjct: 1 MKLSHFNFNLPKELLAEFPAENRDESRLMVIDRQKN---TIEHKMFKDVINYFDDGDVLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREK-----EISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
NNTKV A+L G +EK E+ + W V P++ I+ G+ L
Sbjct: 58 LNNTKVFPARLYG-------NKEKTGARIEVFLLRELNSEQRLWDVLVDPARKIRIGNKL 110
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPID 173
+F D L A VID + L F G E +++ +G P+P YI R +
Sbjct: 111 YFGDDDS---LVAEVIDNTTSRGRTLRFLYDGSYEEFRNKLTELGETPIPKYI--NRDVT 165
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT YAK +G+VAAPTAGLHF+ +LL +L G+ VTLHVG GTF PV+VE
Sbjct: 166 PEDAERYQTIYAKEEGAVAAPTAGLHFSKHLLKKLEIKGVNFAEVTLHVGLGTFNPVEVE 225
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
D H M SE I +N K++ RI +VGTTS+R +E++ + +NP+ G+T
Sbjct: 226 DLSKHKMDSEELIITQEACDIVNEGKAKKKRICAVGTTSMRAIESSVSSANTLNPYEGWT 285
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
N FI P + F + +++NFH PKSTLLM++SAFCG + KK Y+ AI Y+FYSYGD
Sbjct: 286 NKFIFPPHDFSIANCMITNFHTPKSTLLMMISAFCGHDLMKKAYEEAIKEGYKFYSYGDA 345
Query: 354 SLLF 357
L+
Sbjct: 346 MLIL 349
>gi|153824631|ref|ZP_01977298.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae MZO-2]
gi|149741849|gb|EDM55878.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae MZO-2]
Length = 352
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 140/366 (38%), Positives = 209/366 (57%), Gaps = 31/366 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N ++D D+ F+ D +V
Sbjct: 1 MQVSDFHFELPDELIARYPKAERTASRLLQLDGNSGQ---LTDGTFKDVLGFVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + ++ + R SK K G L+
Sbjct: 58 FNNTRVIPARMFGRKASG-----GKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGEN 112
Query: 121 DG-----QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
D Q+R +A ++ ++L ++ +G +PLPPYI RP +
Sbjct: 113 DEFHAVMQARHDALFEIRFTAETVVLDI----------LNQIGHMPLPPYI--DRPDEDA 160
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y + G+VAAPTAGLHF LL ++ + G+++ +VTLHVGAGTF PV+VE+
Sbjct: 161 DKERYQTVYNQKPGAVAAPTAGLHFDQALLEQIQAKGVELAYVTLHVGAGTFQPVRVENI 220
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN-----PWS 290
DH MH+E + A+ + K+RGGR+++VGTTS+R LE+A +D + N P+
Sbjct: 221 HDHHMHAEYVEVPQEVVDAIAATKARGGRVIAVGTTSVRSLESA-AQDALKNGTELKPFF 279
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G T IFI PGY+++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ YRF+SY
Sbjct: 280 GDTEIFIFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYEHTMAAYEHAVKEQYRFFSY 339
Query: 351 GDTSLL 356
GD +
Sbjct: 340 GDAMFI 345
>gi|88799557|ref|ZP_01115133.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Reinekea
sp. MED297]
gi|88777642|gb|EAR08841.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Reinekea
sp. MED297]
Length = 353
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 147/357 (41%), Positives = 208/357 (58%), Gaps = 28/357 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDF LP IA P R +RL+ +H + + D+ + D +V
Sbjct: 1 MHVNDFDFQLPDELIARHPAEQRTGSRLLHLHGDSGQ---VQHRHFPDIEQLIEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + R ++ + S ++ + + +K K G L
Sbjct: 58 FNNTRVIPARLFGQK-----RSGGKVELLIERMTSDHTALAHIKANKSPKAGTEL---IM 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLV---GTIPLPPYIARKRPIDARDY 177
+G +LE T D+ +F + E + L+ G +PLPPY+ R+ D D
Sbjct: 110 EGDIQLEVTGRDQN-------LFCVRCTNPEPLVDLLDQHGHMPLPPYLERE--DDDDDR 160
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YA+ +G+VAAPTAGLHF LL+RL G+ FVTLHVGAGTF PVK ++ D
Sbjct: 161 ERYQTVYAQRKGAVAAPTAGLHFDDALLARLKDKGVNTAFVTLHVGAGTFQPVKADNIKD 220
Query: 238 HIMHSEIGFIDAPTA--QALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
H+MH+E +ID P + + + + K+ G R+++VGTTS+R LETA ++ G I P++G TNI
Sbjct: 221 HVMHAE--WIDVPDSVVEQIRTTKAAGKRVIAVGTTSVRSLETA-SQSGQIEPFTGDTNI 277
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
FI PGYRF+ VD L++NFHLPKSTL+ML+SAF G + Y+ AI YRF+SYGD
Sbjct: 278 FIYPGYRFKTVDALLTNFHLPKSTLIMLISAFAGKDHVMAAYEAAIRERYRFFSYGD 334
>gi|39997714|ref|NP_953665.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Geobacter
sulfurreducens PCA]
gi|81701519|sp|Q749X2|QUEA_GEOSL RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|39984606|gb|AAR35992.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Geobacter
sulfurreducens PCA]
gi|298506648|gb|ADI85371.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Geobacter
sulfurreducens KN400]
Length = 343
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 150/361 (41%), Positives = 201/361 (55%), Gaps = 22/361 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V EFD+ LPP IA P+ RD+ RLM V + I + DL D +V
Sbjct: 1 MLVTEFDYHLPPELIAQEPLVQRDATRLMTVERDGGGIGEIPFRGIVDL---FRPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHM-RVSPN---SWSVYARPSKVIKKGDILH 116
N+T+VI A+L G R+E + + R P +W R SK + G +
Sbjct: 58 INDTRVIPARLLG-------RKESGGKTEIFLVRRRPGDHETWHCLIRSSKPPRPG--VT 108
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
+G V+ + GE LV G + + G +PLPPYI +R DA D
Sbjct: 109 VLLPEGVR----AVVREPGDGETWLVSFTPGEGFQEWLDRNGAMPLPPYI--RREADAAD 162
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT +A+ +G+VAAPTAGLH T+ LL + G++V VTLHVG GTFMP++VE +
Sbjct: 163 RDRYQTVFARNRGAVAAPTAGLHMTAGLLDEIAGRGVRVAPVTLHVGLGTFMPIRVERLE 222
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
DH MH E I TA A+N + GGR++++GTT R LE A DG I G +IF
Sbjct: 223 DHRMHRERYHIPPATADAINGCRREGGRVIALGTTVCRTLEQAAAADGTIAAGEGEADIF 282
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGYRF+AVD L++NFHLPKSTLLMLVSAF G + + Y A++ +RF+SYGD +
Sbjct: 283 IYPGYRFKAVDALITNFHLPKSTLLMLVSAFAGRDLLFRAYGEAVARRFRFFSYGDAMFI 342
Query: 357 F 357
F
Sbjct: 343 F 343
>gi|225011595|ref|ZP_03702033.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Flavobacteria bacterium MS024-2A]
gi|225004098|gb|EEG42070.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Flavobacteria bacterium MS024-2A]
Length = 349
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 145/363 (39%), Positives = 201/363 (55%), Gaps = 22/363 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F F+LP + +A RP RD +RLMV++ I H D+ + + D +V
Sbjct: 1 MKLSNFQFELPNALLAQRPAADRDESRLMVLNRKEET---IEHHSFKDVINYFDEGDVMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREK-----EISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
NNTKV A+L G +EK E+ + W V P++ I+ G+ L
Sbjct: 58 LNNTKVFPARLFG-------NKEKTGARIEVFLLRELNQEQRLWDVLVDPARKIRIGNKL 110
Query: 116 HFFSQDGQSRLEATVIDKWNT-GEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPID 173
+F + L A VID + G L +F S E ++ +G PLP YI KRPI+
Sbjct: 111 YFGEDES---LVAEVIDNTTSRGRTLRFLFDGSYAEFRTKLKELGQTPLPKYI--KRPIE 165
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT YAK +G+VAAPTAGLHF+ +LL RL GI + +TLHVG GTF PV+VE
Sbjct: 166 EEDQERYQTIYAKHEGAVAAPTAGLHFSKHLLKRLEIKGIDLAELTLHVGLGTFSPVEVE 225
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
D H M SE IDA +N+ + RI +VGTT +R LE++ + G++N + G+T
Sbjct: 226 DLSKHKMDSEELIIDAIAVAKVNNALATKKRICAVGTTVMRGLESSVSSAGLLNEYQGWT 285
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+ FI P Y F + +++NFH PKSTLLM++SAF + K Y+ AI Y FYSYGD
Sbjct: 286 HKFIFPPYDFSIANCMITNFHTPKSTLLMMISAFADPDFIKHAYKVAIKEKYNFYSYGDA 345
Query: 354 SLL 356
L+
Sbjct: 346 MLI 348
>gi|167463103|ref|ZP_02328192.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Paenibacillus larvae subsp. larvae BRL-230010]
Length = 354
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 143/363 (39%), Positives = 202/363 (55%), Gaps = 25/363 (6%)
Query: 11 PPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQ 70
P IA P+ R +RLM ++ I H DL +L + D +V N+T+VI A+
Sbjct: 1 PEELIAQTPLSDRTQSRLMTLNKETGE---IGHHTFKDLADYLKAGDLLVLNDTRVIPAR 57
Query: 71 LNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSR--LEA 128
L G++ ++ L + N W RP K IK G L F +Q L A
Sbjct: 58 LFGLK----KDTGAKVELLLLKDLGDNRWEALVRPGKKIKTGAELVFGTQAEADEPVLSA 113
Query: 129 TVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQ 188
V ++ G ++ FS GI + +G +PLPPYI K ++ R+ YQT +AK
Sbjct: 114 IVEEEGEMGARIVRFSYRGI-FNEILDRLGEMPLPPYI--KEQLNDRE--RYQTVFAKHA 168
Query: 189 GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFID 248
GS AAPTAGLHFT L L G+++ F+TLHVG GTF PV V+ +DH +H+E +
Sbjct: 169 GSAAAPTAGLHFTEEFLEGLRGQGVRIAFITLHVGLGTFRPVSVDRVEDHNIHAEYYILS 228
Query: 249 APTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-------DG----IINPWSGFTNIFI 297
TA+ +N +++GGR+++VGTTS R LETA DG +++ SG+T+IFI
Sbjct: 229 EETARLVNETRAQGGRVIAVGTTSARTLETAAGLSHSQGYIDGEGRTLLHACSGWTSIFI 288
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY FRAVD L++NFHLPKSTLLMLVSA + Y A+ + YRF+S+GD ++
Sbjct: 289 YPGYEFRAVDGLLTNFHLPKSTLLMLVSALASRKYILHAYAEAVKNRYRFFSFGDAMFIY 348
Query: 358 QKR 360
+
Sbjct: 349 SNQ 351
>gi|254786638|ref|YP_003074067.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Teredinibacter turnerae T7901]
gi|237683820|gb|ACR11084.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Teredinibacter turnerae T7901]
Length = 359
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 150/356 (42%), Positives = 203/356 (57%), Gaps = 26/356 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F + LP IA P R ++RL+V+ + + L +NS D +V
Sbjct: 1 MRRQDFFYSLPDELIARYPTQDRTASRLLVLD---GASGEVEHSQFASLLERVNSGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYA--RPSKVIKKGDILH 116
FN+T+VI A+L G +K + + V +S VYA R SK K G IL
Sbjct: 58 FNDTRVIPARLFG---------KKSTGGQIEILVERVLDSHRVYAHVRSSKSPKAGAILV 108
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
+DG E T+ + L F LE + +G +PLPPYI R +A+D
Sbjct: 109 L--EDGT---EVTMTAREG-ALFTLEFPRHASALE-VMERIGHMPLPPYI--DRADEAQD 159
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT Y K +G+VAAPTAGLHF LL L + G++V FVTLHVGAGTF PV+ ++
Sbjct: 160 KERYQTVYGKNKGAVAAPTAGLHFDDALLEALKAKGVEVAFVTLHVGAGTFQPVRADNIR 219
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
DH MHSE+ ++D ++ + K RGGR+++VGTTS+R LE+A G + P+ G TNIF
Sbjct: 220 DHEMHSEVMWVDQAVCDSVAATKVRGGRVIAVGTTSVRCLESAAA-SGHLQPYQGDTNIF 278
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
I P Y FR VD L++NFHLP+STLLML+SAF G T Y A+ YRF+SYGD
Sbjct: 279 IYPSYEFRVVDALVTNFHLPESTLLMLISAFAGYTNTMNAYAQAVQEKYRFFSYGD 334
>gi|91225158|ref|ZP_01260380.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
alginolyticus 12G01]
gi|269965152|ref|ZP_06179286.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase [Vibrio
alginolyticus 40B]
gi|91190101|gb|EAS76372.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
alginolyticus 12G01]
gi|269830138|gb|EEZ84365.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase [Vibrio
alginolyticus 40B]
Length = 350
Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 146/370 (39%), Positives = 213/370 (57%), Gaps = 33/370 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N + D +D+ + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQPERTASRLLQMDGNTG---ELIDGTFTDVLGQVQPGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCH------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
FNNT+VI A+L G + + R E S H+R S + +P I G+
Sbjct: 58 FNNTRVIPARLFGRKESGGKLEVLVERMLDEKSILAHVRCSKSP-----KPGTTIIVGEN 112
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
+ S + +R +A K+++ + +L + +G +PLPPYI RP +
Sbjct: 113 DEY-SAEMVARHDALFELKFSSDKTVLEI----------LEEIGHMPLPPYI--DRPDED 159
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D YQT Y + G+VAAPTAGLHF LL ++ + G + +VTLHVGAGTF PVKVE+
Sbjct: 160 ADKERYQTVYNQKPGAVAAPTAGLHFDDVLLEKIKAKGAEFAYVTLHVGAGTFQPVKVEN 219
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-----INPW 289
+DH MH+E + +A+ + K+RGGRI++VGTTS+R LE+A +D + + P+
Sbjct: 220 INDHHMHAEYVEVPQEVVEAIKATKARGGRIIAVGTTSVRSLESA-AQDALQKGTELAPF 278
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
G T IFI PGY ++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ + YRF+S
Sbjct: 279 FGDTEIFIFPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYENTMNAYKHAVENKYRFFS 338
Query: 350 YGDTSLLFQK 359
YGD+ + +K
Sbjct: 339 YGDSMFIKKK 348
>gi|257465430|ref|ZP_05629801.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus minor 202]
gi|257451090|gb|EEV25133.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus minor 202]
Length = 363
Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 151/378 (39%), Positives = 211/378 (55%), Gaps = 45/378 (11%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +F FDLP + IA P+ R ++RL+ ++ +D +DL L+ D +V
Sbjct: 1 MLVSDFHFDLPDNLIARYPMPDRTASRLLYLNGETGE---FADQHFTDLLDHLHEGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCH------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
FNNT+VI A+L G + I R E C H+R S K K+G
Sbjct: 58 FNNTRVIPARLYGQKISGGKVEALIERVLDEHRCLAHVRAS-----------KAPKEGTQ 106
Query: 115 LHFFSQD--GQSR-LEATVIDKWNTGEILLVFSISGIELERQISL------VGTIPLPPY 165
L F +D G+ L AT+ + +T + + E Q +L G +PLPPY
Sbjct: 107 L-IFGEDKLGEGNGLVATMAARHDT--------LFELHFESQTNLFDLLQSAGHMPLPPY 157
Query: 166 IARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAG 225
I RP + D YQT Y+K+ G+VAAPTAGLHF + +L +L G+ FVTLHVGAG
Sbjct: 158 I--DRPDEDADQERYQTVYSKVLGAVAAPTAGLHFDNVMLEKLKEKGVNTAFVTLHVGAG 215
Query: 226 TFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT----T 281
TF PV+VE+ DH MH+E + + K+ G R+++VGTTS+R +E+A
Sbjct: 216 TFQPVRVENILDHKMHAEYAEVSQDVVDKILETKANGKRVIAVGTTSVRSIESAAQAVKN 275
Query: 282 EDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAI 341
D +I P+ T+IFI PG F+ VD L++NFHLP+STL+MLVSAF G + T YQHA+
Sbjct: 276 SDTLIEPFFSDTSIFIYPGKTFKVVDALVTNFHLPESTLIMLVSAFAGYKNTMNAYQHAV 335
Query: 342 SHAYRFYSYGDTSLLFQK 359
YRF+SYGD ++ QK
Sbjct: 336 ESQYRFFSYGD-AMFIQK 352
>gi|260596775|ref|YP_003209346.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cronobacter
turicensis z3032]
gi|260215952|emb|CBA28567.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase [Cronobacter
turicensis z3032]
Length = 356
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 149/360 (41%), Positives = 210/360 (58%), Gaps = 27/360 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M + +F FDLP S IA P R + RL+ +L P H +DL LN D +
Sbjct: 1 MRLTDFSFDLPESLIAHYPQAQRSACRLL----SLDGPTGDLTHGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + + R SK K G L
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEVLVERMLDDHRVLAHIRASKAPKPGAEL--LL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARKRPIDAR 175
D +S + AT+ + + +F + ER + + +G +PLPPYI +RP +
Sbjct: 110 GDDES-VNATMTARHDA-----LFEVQ-FNDERPVLDILNSIGHMPLPPYI--ERPDEEA 160
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y++ G+VAAPTAGLHF LL RL + GI++ FVTLHVGAGTF PV+VE
Sbjct: 161 DRELYQTVYSQKPGAVAAPTAGLHFDEPLLERLRAKGIEMAFVTLHVGAGTFQPVRVESI 220
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFT 293
+DH+MHSE + A+ + K+RG ++V+VGTTS+R LE+A +D +I P+ G T
Sbjct: 221 EDHVMHSEYAEVPQEVVDAVLAAKARGNKVVAVGTTSVRSLESAAQAAQDALIAPFFGDT 280
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFI PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD
Sbjct: 281 QIFIYPGYQYQVIDALVTNFHLPESTLIMLVSAFAGYKHTMNAYREAVKAEYRFFSYGDA 340
>gi|309750338|gb|ADO80322.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queuosine
biosynthesis protein) [Haemophilus influenzae R2866]
Length = 363
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 142/364 (39%), Positives = 209/364 (57%), Gaps = 19/364 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R S RL+ ++ IS SD+ ++ D ++
Sbjct: 1 MRVSDFNFDLPDELIARYPKIDRVSCRLLQLNGENG---EISHRTFSDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT VI A++ G + +I + + + + + R SK K+G L F +
Sbjct: 58 FNNTHVIPARMFGRKASG-----GKIEVLVERMLDEHRFLAHIRSSKSPKEGTEL-FLGE 111
Query: 121 D--GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
D G++ V+ ++ + S L + +G +PLPPYI RP + D
Sbjct: 112 DKLGENNGIKAVMKARHSSLFEVELSDKSTALLDVLQTIGHMPLPPYI--DRPDEEADQE 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y+K+ G+VAAPTAGLHF NLL +L + G+ FVTLHVGAGTF PV+VE+ +DH
Sbjct: 170 CYQTVYSKVPGAVAAPTAGLHFDENLLEKLKAKGVNFEFVTLHVGAGTFQPVRVENIEDH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTED----GIINPWSGF 292
+MH+E + A+ + K G R+++VGTTS+R +E+A + E+ +I P+
Sbjct: 230 VMHAEYVEVSQEVCNAIIATKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSD 289
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + T Y+ A+ + YRF+SYGD
Sbjct: 290 TSIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKSAVENHYRFFSYGD 349
Query: 353 TSLL 356
+
Sbjct: 350 AMFI 353
>gi|115314592|ref|YP_763315.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. holarctica OSU18]
gi|254367443|ref|ZP_04983469.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. holarctica 257]
gi|122325383|sp|Q0BMK6|QUEA_FRATO RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|115129491|gb|ABI82678.1| queuine tRNA-ribosyltransferase [Francisella tularensis subsp.
holarctica OSU18]
gi|134253259|gb|EBA52353.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. holarctica 257]
Length = 340
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 135/357 (37%), Positives = 210/357 (58%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LP IA P+ RD++RL+ ++ I+D+ +D F+N D +V
Sbjct: 3 MKTDDFDYKLPEELIASYPLENRDASRLLKLNKQTGE---IADYKFTDFIDFINPGDLLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV+ A+L G + ++ + +P + + + ++ G ++
Sbjct: 60 FNNSKVMLARLYGSKTTG-----AKLEYLIERIKNPKLFETHIKANRSPAIGSEIYV--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ L A V+DK G + L+ ++ + + G IPLPPY+ KR + D Y
Sbjct: 112 --EDTL-AKVLDK--DGGMYLLEIQGDKDIYQLMEEFGHIPLPPYM--KRDDEEFDAERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GSVAA TAGLHF+ L+ ++ G+ + ++TLHVG+GTF PV+V+D + H M
Sbjct: 165 QTVYAQDLGSVAALTAGLHFSKELMQQIKDKGVDIAYITLHVGSGTFKPVQVDDVESHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E+ + Q + K GGR++++GTTS+R LETA ++G I P+ G T+IF+ PG
Sbjct: 225 HAEVISVPVEVCQKIRQTKENGGRVITIGTTSVRSLETA-GQNGQIEPYQGETDIFLYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F VD +++NFHLPKSTL+MLVSAF E+ K Y+HAI+ YRF+SYGD +F
Sbjct: 284 KKFNVVDAMITNFHLPKSTLIMLVSAFADKEKIIKAYEHAIAERYRFFSYGDAMFIF 340
>gi|312880164|ref|ZP_07739964.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Aminomonas
paucivorans DSM 12260]
gi|310783455|gb|EFQ23853.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Aminomonas
paucivorans DSM 12260]
Length = 355
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 145/358 (40%), Positives = 199/358 (55%), Gaps = 20/358 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
V + +DLP IA P PRDS+RL+V+ V + DL +L D +V N
Sbjct: 15 VSAYQYDLPEELIAQDPAEPRDSSRLLVLERGRG---VAAHRTFRDLEEYLREGDLLVLN 71
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+V A+L R + EI + + N W+ RP + + G L +DG
Sbjct: 72 DTRVRPARL---RARKTSSGRVEILVLRPLDPASNLWTALVRPGRRVPPGTPLLL--EDG 126
Query: 123 -QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ R+E + D + L L R++ G +PLPPYI R R YQ
Sbjct: 127 TEVRVEERLEDGLRA--LRLPQETDPTRLFRRL---GEVPLPPYITRSVAPAER----YQ 177
Query: 182 TTYAKI--QGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
T Y++ +GS AAPTAGLHFT+ LL RL + GI FVTL VG GTF PV+ E +DH+
Sbjct: 178 TVYSRPDREGSAAAPTAGLHFTAPLLKRLEARGIGQAFVTLDVGLGTFRPVQTERAEDHV 237
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH E + TA+A+ + RGGR+V+VGTT +R LET E+G + P T ++I P
Sbjct: 238 MHLERCSLGEETAEAIRQTRRRGGRVVAVGTTVVRTLETFANEEGQVLPGERDTRLYIRP 297
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GYRFR VD L++NFHLP+STLLMLV+AF G E + Y+ A+ YRF+S+GD +L
Sbjct: 298 GYRFRVVDGLITNFHLPRSTLLMLVAAFGGYEPVLEAYREAVQLRYRFFSFGDAMILL 355
>gi|269468922|gb|EEZ80506.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase [uncultured
SUP05 cluster bacterium]
Length = 340
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 152/357 (42%), Positives = 203/357 (56%), Gaps = 24/357 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M++ +FDF+LP IA P R + L+V I D + F++ D +V
Sbjct: 1 MLLSDFDFNLPNELIAQHPPKKRTDSNLLVAQS------TIIDTKFHKIEDFISPGDLLV 54
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS- 119
NNT+VI A+L G +E + + N V A K + I F +
Sbjct: 55 MNNTRVIPARLFG-------HKESGGKVEIMIERLLNDHQVLAM-MKASRAPKIDSFITI 106
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
++G+ +A VI K N L + S ++L + VG IPLPPYI R + D
Sbjct: 107 ENGE---KAQVISKKNGFYTLNFITNSLLDL---LDNVGHIPLPPYIERGD--EQADLER 158
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +AK +G+VAAPTAGLHF LL L + G+ FVTLHVGAGTF PVK + DH
Sbjct: 159 YQTVFAKHEGAVAAPTAGLHFDDELLLSLKTKGVDHCFVTLHVGAGTFQPVKADKITDHK 218
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE ID T +N KS GGRI++VGTT++R +E+A + G + G T+IFI P
Sbjct: 219 MHSEYFEIDQITVDKINQTKSNGGRIIAVGTTAVRSVESA-AKSGTLKAIKGETDIFIYP 277
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+ VD L++NFHLPKS+LLMLVSAF G ++ ++YQHAI YRF+SYGD LL
Sbjct: 278 GYEFKIVDKLITNFHLPKSSLLMLVSAFIGRDKMMEIYQHAIDKKYRFFSYGDAMLL 334
>gi|319796412|ref|YP_004158052.1| s-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Variovorax
paradoxus EPS]
gi|315598875|gb|ADU39941.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Variovorax
paradoxus EPS]
Length = 347
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 148/360 (41%), Positives = 202/360 (56%), Gaps = 29/360 (8%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDFDLPP +A P R S+RL+ P+ D + DLP+ L D +VFN
Sbjct: 6 LSDFDFDLPPELVAQHPASERTSSRLL--DGTGDAPV---DRIFKDLPSLLREGDLLVFN 60
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFFSQ 120
+T+V+ A+L G EK L + V V A KV KK +
Sbjct: 61 DTRVVKARLFG---------EKPTGGKLELLVERVLQGQEVVAH-MKVSKKPPVGTTLEM 110
Query: 121 DGQSRLEATVIDKWNTGE-ILLVFSISGIELERQISLV---GTIPLPPYIARKRPIDARD 176
G R AT++ +W + L F+ E L+ G +PLPPYI +D D
Sbjct: 111 VGGFR--ATLLGRWPEEDGALFRFAFESDAGENPYMLMERCGHVPLPPYITHTDSVD--D 166
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT +A++ G+VAAPTA LHF LL+ L + G++ VTLHVGAGTF PVK E+
Sbjct: 167 ESRYQTVFARVPGAVAAPTAALHFDEGLLAALEARGVQRANVTLHVGAGTFQPVKTENIA 226
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+H MH+E + T +A+ K+RGGR+++VGTT++R LE+ +G T IF
Sbjct: 227 EHTMHAERYEVPEATRRAIAECKARGGRVIAVGTTTVRTLESWAKS----GEATGDTRIF 282
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPG+ F VD+L++NFHLPKSTL+MLVSAF G E +Y +AI+H YRF+SYGD LL
Sbjct: 283 ITPGFAFAHVDVLVTNFHLPKSTLMMLVSAFAGYERVMALYANAIAHQYRFFSYGDAMLL 342
>gi|269123395|ref|YP_003305972.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Streptobacillus moniliformis DSM 12112]
gi|268314721|gb|ACZ01095.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Streptobacillus moniliformis DSM 12112]
Length = 342
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 143/354 (40%), Positives = 203/354 (57%), Gaps = 22/354 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V+++DF+LP IA + PRD ++L+V++ N I D ++ +L ND +V
Sbjct: 1 MRVEDYDFELPLEFIAQHAIEPRDHSKLLVLNKNNGA---IEDKKFYNIIDYLTPNDILV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEI--SCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N TKVI A+L G ++E + C L R+ W V +P+K +K D L F
Sbjct: 58 INRTKVIPARLFG-------KKENGVILECFLLKRIDLKKWEVLLKPAKKLKINDKLIF- 109
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+L A +++ G ++ F G+ + + +PLPPYI K R
Sbjct: 110 ----SEKLSAKLLEIKEDGNRIMEFEFEGVFE-EILDELAEMPLPPYITEKLENKNR--- 161
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YAK SVAAPTAGLHFT+ LL ++ GI + V L VG GTF PV+VE+ +DH
Sbjct: 162 -YQTVYAKSGESVAAPTAGLHFTTELLEKIEKKGITIVEVYLTVGLGTFRPVQVENVEDH 220
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
IMHSE + TA+ +N K G RI++VGTTS+R LE++ ++ + T+IFI
Sbjct: 221 IMHSEEYIVPEKTAEIINQGKKDGKRIIAVGTTSIRTLESSLDDNNNLIAQKSETSIFIH 280
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
Y+F+ VD L++NFHLPKSTL+MLVS+F E YQHAI + YRF+S+GD
Sbjct: 281 GEYKFKIVDALITNFHLPKSTLIMLVSSFANKEYVMNAYQHAIKNNYRFFSFGD 334
>gi|254369121|ref|ZP_04985133.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. holarctica FSC022]
gi|157122071|gb|EDO66211.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. holarctica FSC022]
Length = 340
Score = 239 bits (611), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 135/357 (37%), Positives = 210/357 (58%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LP IA P+ RD++RL+ ++ I+D+ +D F+N D +V
Sbjct: 3 MKTDDFDYKLPEELIASYPLENRDASRLLKLNKQTGE---IADYKFTDFIDFINPGDLLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV+ A+L G + ++ + +P + + + ++ G ++
Sbjct: 60 FNNSKVMLARLYGSKTTG-----AKLEYLIERIKNPKLFETHIKANRSPAIGSEIYV--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ L A V+DK G + L+ ++ + + G IPLPPY+ KR + D Y
Sbjct: 112 --EDTL-AKVLDK--DGGMYLLEIQGDKDIYQLMEEFGHIPLPPYM--KRDDEEFDAERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GSVAA TAGLHF+ L+ ++ G+ + ++TLHVG+GTF PV+V+D + H M
Sbjct: 165 QTVYAQDLGSVAALTAGLHFSKELMQQIKDKGVDIAYITLHVGSGTFKPVQVDDIESHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E+ + Q + K GGR++++GTTS+R LETA ++G I P+ G T+IF+ PG
Sbjct: 225 HAEVISVPVEVCQKIRQTKENGGRVIAIGTTSVRSLETA-GQNGQIEPYQGETDIFLYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F VD +++NFHLPKSTL+MLVSAF E+ K Y+HAI+ YRF+SYGD +F
Sbjct: 284 KKFNVVDAMITNFHLPKSTLIMLVSAFADKEKIIKAYEHAIAERYRFFSYGDAMFIF 340
>gi|238577798|gb|ACR46709.1| QueA [Pseudomonas syringae pv. tabaci]
gi|330984993|gb|EGH83096.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. lachrymans str. M301315]
gi|331009165|gb|EGH89221.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. tabaci ATCC 11528]
Length = 354
Score = 239 bits (611), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 154/367 (41%), Positives = 204/367 (55%), Gaps = 42/367 (11%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R S+RL+ L P ++ +DL L D +
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLL----TLDGPTGALAHRQFTDLLEHLRPGDLM 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDIL-HFF 118
VFNNT+VI A+L G +K L + V +V+ +L H
Sbjct: 57 VFNNTRVIPARLFG---------QKASGGKLEILVE-----------RVLDSHRVLAHVR 96
Query: 119 SQDGQSRLEATVIDKWNTGEILL----VFSISGIE-----LERQISLVGTIPLPPYIARK 169
S + +ID E++ +F + E LER VG +PLPPYI
Sbjct: 97 SSKSPKPGSSILIDGGGEAEMVARHDALFELRFAEEVLPLLER----VGHMPLPPYI--D 150
Query: 170 RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
RP + D YQT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF P
Sbjct: 151 RPDEGADRERYQTVYAQRAGAVAAPTAGLHFDQPLLEAIAAKGVETAFVTLHVGAGTFQP 210
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPW 289
V+VE +DH MHSE + A+ + ++RGGR+++VGTTS+R LE+A DG + P+
Sbjct: 211 VRVEQIEDHHMHSEWLEVGQDVVDAVAACRARGGRVIAVGTTSVRSLESA-ARDGELKPF 269
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
SG T+IFI PG F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+S
Sbjct: 270 SGDTDIFIYPGRPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFS 329
Query: 350 YGDTSLL 356
YGD +
Sbjct: 330 YGDAMFI 336
>gi|326315377|ref|YP_004233049.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Acidovorax
avenae subsp. avenae ATCC 19860]
gi|323372213|gb|ADX44482.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Acidovorax
avenae subsp. avenae ATCC 19860]
Length = 369
Score = 239 bits (611), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 146/371 (39%), Positives = 209/371 (56%), Gaps = 27/371 (7%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF LPP IA P R ++RL+ ++ D + +LP L D +VFN
Sbjct: 12 LSDFDFSLPPELIAQHPAPERSASRLLDGRADVPV-----DRIFRELPDLLQPGDLLVFN 66
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWS-----VYARPSKVIKKGDILHF 117
+T+V+ A++ G + + E I L V PN + + + SK G +LH
Sbjct: 67 DTRVVKARVFGEK-ASGGKVELLIERVL---VGPNGEAGNEVVAHMKVSKKPAVGAMLHM 122
Query: 118 FSQDGQSRLEATVIDKW-NTGEILLVFSISGIELERQISLV---GTIPLPPYIARKR--- 170
AT++ +W + L F++S + E +L+ G +PLPPYI R +
Sbjct: 123 AGGPAGGGFGATLLGRWPDEDGPLFRFALSSPDGEGPHALMERHGHMPLPPYIERHQDGG 182
Query: 171 --PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFM 228
P A D YQT +A+ G+VAAPTA LHF +L+ L + G++ VTLHVGAGTF
Sbjct: 183 GDPDAAEDAERYQTVFARAPGAVAAPTAALHFDEGVLASLAARGVERASVTLHVGAGTFQ 242
Query: 229 PVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINP 288
PVK E DH MHSE + T AL + RGGR+V+VGTT++R LE+
Sbjct: 243 PVKTESLADHRMHSEWYEVPLATLAALERCRQRGGRVVAVGTTTVRTLESWARS----GQ 298
Query: 289 WSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
+G T+IFITPG+ F+ VD+L++NFHLPKSTL+ML+SAF G + +Y+HAI+ YRF+
Sbjct: 299 ATGDTDIFITPGFAFQVVDLLVTNFHLPKSTLMMLISAFTGYDHAMDLYRHAIAQRYRFF 358
Query: 349 SYGDTSLLFQK 359
SYGD LL ++
Sbjct: 359 SYGDAMLLARR 369
>gi|51102958|gb|AAT96106.1| QueA [Pseudomonas viridiflava]
Length = 354
Score = 239 bits (611), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 148/362 (40%), Positives = 203/362 (56%), Gaps = 32/362 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP S IA P+ R S+RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFDLPDSLIARHPLAERRSSRLLTLD---GVSGALAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDIL-HFFS 119
FNNT+VI A+L G +K L + V +V+ +L H S
Sbjct: 58 FNNTRVIPARLFG---------QKASGGKLEILVE-----------RVLDSHRVLAHVRS 97
Query: 120 QDGQSRLEATVIDKWNTGEILL----VFSIS-GIELERQISLVGTIPLPPYIARKRPIDA 174
+ +ID E++ +F + E+ + VG +PLPPYI RP +
Sbjct: 98 SKSPKPGSSILIDGGGEAEMVARHDALFELRFAEEVLPLLDRVGHMPLPPYI--DRPDEG 155
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D YQT YA+ G+VAAPTAGLHF L+ + + G++ FVTLHVGAGTF PV+VE
Sbjct: 156 ADRERYQTVYAQRAGAVAAPTAGLHFDQPLMEAIAAKGVETTFVTLHVGAGTFQPVRVEQ 215
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
+DH MH+E + A+ + ++RGGR+++VGTTS+R LE+A DG++ P+SG T+
Sbjct: 216 IEDHHMHTEWLEVGQDVVDAVAACRARGGRVIAVGTTSVRSLESA-ARDGVLKPFSGDTD 274
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PG F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+SYGD
Sbjct: 275 IFIYPGRPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFSYGDAM 334
Query: 355 LL 356
+
Sbjct: 335 FI 336
>gi|330969090|gb|EGH69156.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. aceris str. M302273PT]
Length = 354
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 154/367 (41%), Positives = 204/367 (55%), Gaps = 42/367 (11%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R S+RL+ L P ++ +DL L D +
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLL----TLDGPTGALAHRQFTDLLEHLRPGDLM 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDIL-HFF 118
VFNNT+VI A+L G +K L + V +V+ +L H
Sbjct: 57 VFNNTRVIPARLFG---------QKASGGKLEILVE-----------RVLDSHRVLAHVR 96
Query: 119 SQDGQSRLEATVIDKWNTGEILL----VFSISGIE-----LERQISLVGTIPLPPYIARK 169
S + +ID E++ +F + E LER VG +PLPPYI
Sbjct: 97 SSKSPKPGSSILIDGSGEAEMVARHDALFELRFAEEVLPLLER----VGHMPLPPYI--D 150
Query: 170 RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
RP + D YQT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF P
Sbjct: 151 RPDEGADRERYQTVYAQRAGAVAAPTAGLHFDQPLLEAIAAKGVETAFVTLHVGAGTFQP 210
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPW 289
V+VE +DH MHSE + A+ + ++RGGR+++VGTTS+R LE+A DG + P+
Sbjct: 211 VRVEQIEDHHMHSEWLEVGQDVVDAVAACRARGGRVIAVGTTSVRSLESA-ARDGELKPF 269
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
SG T+IFI PG F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+S
Sbjct: 270 SGDTDIFIYPGRPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFS 329
Query: 350 YGDTSLL 356
YGD +
Sbjct: 330 YGDAMFI 336
>gi|197335931|ref|YP_002156798.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
fischeri MJ11]
gi|226713855|sp|B5F9Y4|QUEA_VIBFM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|197317421|gb|ACH66868.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
fischeri MJ11]
Length = 350
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 140/366 (38%), Positives = 217/366 (59%), Gaps = 25/366 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ ++ N ++D +D+ + + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPQPERTASRLLQLNGNSGE---LNDGQFTDILDLVQAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G++ ++ + + +S + R SK K G +L +
Sbjct: 58 FNNTRVIPARMFGMKASG-----GKLEVLVERVLDEHSVLAHVRCSKSPKPGTML-LLGE 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISL---VGTIPLPPYIARKRPIDARDY 177
+ + EA ++ + +T +F I ++ + + +G +PLPPYI RP + D
Sbjct: 112 NQEH--EAEMVARHDT-----LFEIRFTSDKKVLDILDEIGHMPLPPYI--DRPDEDADK 162
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT Y K G+VAAPTAGLHF + +L ++ + G++ +VTLHVGAGTF PV+V++ +
Sbjct: 163 ERYQTVYNKKPGAVAAPTAGLHFDTEILEKMKAKGVEFAYVTLHVGAGTFQPVRVDNILE 222
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFT 293
H MHSE + A+N+ K+RGGR+VSVGTTS+R LE+A + + P+ T
Sbjct: 223 HHMHSEYAEVSQEVIDAINATKARGGRVVSVGTTSVRSLESAAQHALKQGTELAPFFDDT 282
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFI PGY F+ VD L++NFHLP+STL+MLVSAF G + T K Y+ A+++ YRF+SYGD
Sbjct: 283 EIFIYPGYEFQVVDALVTNFHLPESTLIMLVSAFAGYDNTMKAYEQAVNNKYRFFSYGDA 342
Query: 354 SLLFQK 359
+ +K
Sbjct: 343 MFITKK 348
>gi|332184351|gb|AEE26605.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
cf. novicida 3523]
Length = 338
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 133/357 (37%), Positives = 210/357 (58%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LP IA P+ RD+++L+ ++ I+DH +DL F+ D +V
Sbjct: 1 MKTDDFDYKLPEELIASYPLENRDASKLLKLNRQTGE---IADHKFTDLIDFITPKDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV+ A+L G + ++ + +P + + + ++ G + +
Sbjct: 58 FNNSKVMLARLYGSKTTG-----AKLEYLIERIKTPKLFETHIKANRSPAIGS--EIYVE 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D ++ V+DK G + L+ ++ + G IPLPPY+ KR + D Y
Sbjct: 111 DTLAK----VLDK--DGGMYLLEIQGDKDIYHLMEEFGHIPLPPYM--KREDEEFDAERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GSVAAPTAGLHF+ L+ ++ GI + ++TLHVG+GTF PV+V++ + H M
Sbjct: 163 QTVYAKDLGSVAAPTAGLHFSQQLMQQIKDKGIDIAYITLHVGSGTFKPVQVDNVESHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E+ + A + + K+ GGR++++GTTS+R LETA ++G I P+ G T+IF+ PG
Sbjct: 223 HAEVISVPADVCEKIRQTKANGGRVIAIGTTSVRSLETA-GQNGQIEPYQGETDIFLYPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F VD +++NFHLPKSTL+MLVSAF + + Y HAI+ YRF+SYGD ++
Sbjct: 282 KKFNVVDAMITNFHLPKSTLIMLVSAFADKHKIMQAYHHAIAQKYRFFSYGDAMFIY 338
>gi|237800018|ref|ZP_04588479.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. oryzae str. 1_6]
gi|331022873|gb|EGI02930.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. oryzae str. 1_6]
Length = 354
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 152/362 (41%), Positives = 203/362 (56%), Gaps = 38/362 (10%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R S+RL+ L P ++ +DL L S D +
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLL----TLDGPTGALAHRQFTDLLEHLRSGDLM 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDIL-HFF 118
VFNNT+VI A+L G +K L + V +V+ +L H
Sbjct: 57 VFNNTRVIPARLFG---------QKTSGGKLEILVE-----------RVLDSHRVLAHVR 96
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGI-------ELERQISLVGTIPLPPYIARKRP 171
S + +ID GE+ +V + E+ + VG +PLPPYI RP
Sbjct: 97 SSKSPKPGSSILID--GGGEVEMVARHDALFELRFAEEVLPLLDRVGHMPLPPYI--DRP 152
Query: 172 IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK 231
+ D YQT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF PV+
Sbjct: 153 DEGSDRERYQTVYAQRAGAVAAPTAGLHFDQPLLDAIAAKGVETAFVTLHVGAGTFQPVR 212
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSG 291
VE +DH MHSE + A+ + ++RGGR+++VGTTS+R LE+A DG + P+SG
Sbjct: 213 VEQIEDHHMHSEWLEVSQDVVDAVAACRARGGRVIAVGTTSVRSLESA-ARDGELKPFSG 271
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T+IFI PG F VD L++NFHLP+STLLMLVSAF G ET Y A+ H YRF+SYG
Sbjct: 272 DTDIFIYPGRPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAVEHGYRFFSYG 331
Query: 352 DT 353
D
Sbjct: 332 DA 333
>gi|224543527|ref|ZP_03684066.1| hypothetical protein CATMIT_02736 [Catenibacterium mitsuokai DSM
15897]
gi|224523554|gb|EEF92659.1| hypothetical protein CATMIT_02736 [Catenibacterium mitsuokai DSM
15897]
Length = 350
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 144/356 (40%), Positives = 196/356 (55%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++ FD++LP IA P+ RD++RLMV+ V H D+ +L D +V
Sbjct: 10 MDIELFDYNLPEELIAQTPLKKRDTSRLMVLDKETGN--VEHKHFY-DILDYLKPGDVLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L G++ + L + + W +K++K G ++ F
Sbjct: 67 RNNTKVIPARLYGLK----EETGGHVEVLLLKDLHDDLWECLVGNAKIVKLGTVITF--- 119
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A + G + GI E + +G +PLPPYI K D Y
Sbjct: 120 -GDGRLKAQCTEIREEGIRIFKMIYDGIFYE-ILDQLGIMPLPPYIKEK----LNDPDRY 173
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK++GS AAPTAGLHFT LL ++ G+++ VTLHVG GTF PVKVE+ +H M
Sbjct: 174 QTVYAKVEGSAAAPTAGLHFTEELLQKVREKGVEILDVTLHVGLGTFRPVKVENVLEHHM 233
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I A+ LN K G RI++VGTTS R LE ++ G TNIFI PG
Sbjct: 234 HSEYYEISEEVAEKLNQAKKEGRRIIAVGTTSCRTLEANHSKYGCFKAAHENTNIFIYPG 293
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F +D L++NFHLPKSTL+MLVSA G E Y+ A++ YRF+S+GD +
Sbjct: 294 YTFTGIDALITNFHLPKSTLVMLVSALAGREHILNAYKIAVNEKYRFFSFGDAMFI 349
>gi|317047142|ref|YP_004114790.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Pantoea sp.
At-9b]
gi|316948759|gb|ADU68234.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Pantoea sp.
At-9b]
Length = 383
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 148/360 (41%), Positives = 212/360 (58%), Gaps = 27/360 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAI 59
M V +F F+LP S IA P R RL+ +L P +S + +D+ LN D +
Sbjct: 28 MRVADFSFELPESLIAHYPQAQRSGCRLL----SLDGPSGALSHGVFTDVLEKLNPGDLL 83
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A++ G + +I + + + R SK K G L
Sbjct: 84 VFNNTRVIPARVYGRKASG-----GKIEMLVERMLDDKRVLAHVRASKAPKPGAEL--LL 136
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARKRPIDAR 175
D +S ++AT++ + +T +F I+ E +R + + VG +PLPPYI RP +
Sbjct: 137 GDDES-VKATMVARHDT-----LFEIA-FEDDRAVLDILNSVGHMPLPPYI--DRPDEEA 187
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y+ G+VAAPTAGLHF LL L + G+++ FVTLHVGAGTF PV+VE
Sbjct: 188 DRELYQTVYSARPGAVAAPTAGLHFDDPLLQALKAKGVEMAFVTLHVGAGTFQPVRVESI 247
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFT 293
+DH MHSE + A+ + K+RG ++V+VGTTS+R LE+A ++D +I P+ T
Sbjct: 248 EDHTMHSEYAEVPQEVVDAVLACKARGNKVVAVGTTSVRSLESAAQASKDALIAPFFDDT 307
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFI PGY+++ +D L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD
Sbjct: 308 QIFIYPGYQYQVIDALITNFHLPESTLIMLVSAFAGYQHTMAAYQAAVAEQYRFFSYGDA 367
>gi|148825473|ref|YP_001290226.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae PittEE]
gi|166216724|sp|A5UAP2|QUEA_HAEIE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|148715633|gb|ABQ97843.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae PittEE]
Length = 363
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 141/364 (38%), Positives = 208/364 (57%), Gaps = 19/364 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R S RL+ ++ I SD+ ++ D ++
Sbjct: 1 MRVSDFNFDLPDELIARYPKTDRVSCRLLQLNGENG---EIFHRTFSDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + + R SK K+G L F +
Sbjct: 58 FNNTRVIPARMFGRKASG-----GKIEVLVERMLDEHRFLAHIRSSKSPKEGAEL-FLGE 111
Query: 121 D--GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
D G++ V+ ++ + S L + +G +PLPPYI RP + D
Sbjct: 112 DKLGENNGIKAVMKARHSSLFEVELSDKSTALLDVLQTIGHMPLPPYI--DRPDEEADKE 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y+K+ G+VAAPTAGLHF NLL +L + G+ FVTLHVGAGTF PV+VE+ +DH
Sbjct: 170 CYQTVYSKVPGAVAAPTAGLHFDENLLEKLKAKGVNFEFVTLHVGAGTFQPVRVENIEDH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTED----GIINPWSGF 292
+MH+E + A+ + K G R+++VGTTS+R +E+A + E+ +I P+
Sbjct: 230 VMHAEYVEVSQEVCNAIIATKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSD 289
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD
Sbjct: 290 TSIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKQAVQEKYRFFSYGD 349
Query: 353 TSLL 356
+
Sbjct: 350 AMFI 353
>gi|146308536|ref|YP_001189001.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
mendocina ymp]
gi|166216740|sp|A4XY53|QUEA_PSEMY RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|145576737|gb|ABP86269.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Pseudomonas mendocina ymp]
Length = 347
Score = 239 bits (610), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 154/356 (43%), Positives = 202/356 (56%), Gaps = 26/356 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F FDLP S IA P+ R ++RL+ L P H +DL L D +
Sbjct: 1 MRVADFHFDLPESLIARHPLAERRASRLL----QLDGPSGALRHGQFTDLLEQLRPGDLM 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + R E + L + + R SK K G +
Sbjct: 57 VFNNTRVIPARLFGQK-ASGGRLEVLVERVLDQ----HRVLAHVRSSKSPKPGSQI-LIE 110
Query: 120 QDGQSRLEA--TVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
G++ + A + + E +L LER VG +PLPPYI RP D D
Sbjct: 111 GGGEAEMVARHDALFELRFAEPVLPL------LER----VGHMPLPPYI--DRPDDEADR 158
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YA+ G+VAAPTAGLHF LL+ + + G++ FVTLHVGAGTF PV+VE +D
Sbjct: 159 ERYQTVYAEKAGAVAAPTAGLHFDDELLAAIRAKGVETAFVTLHVGAGTFQPVRVERIED 218
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MHSE + A+ + ++RGGR+V+VGTTS+R LETA + + P+SG T+IFI
Sbjct: 219 HHMHSEWLEVSQEVVDAVAACRARGGRVVAVGTTSVRSLETA-AQSSELKPFSGDTDIFI 277
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
PG F VD L++NFHLP+STLLMLVSAF G ET Y+ A+ YRF+SYGD
Sbjct: 278 YPGRPFHVVDALVTNFHLPESTLLMLVSAFAGYAETMAAYRAAVEQGYRFFSYGDA 333
>gi|91792758|ref|YP_562409.1| S-adenosylmethionine [Shewanella denitrificans OS217]
gi|122968830|sp|Q12PE0|QUEA_SHEDO RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|91714760|gb|ABE54686.1| S-adenosylmethionine [Shewanella denitrificans OS217]
Length = 346
Score = 239 bits (610), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 144/362 (39%), Positives = 204/362 (56%), Gaps = 21/362 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAI 59
M V +F FDLP IA P R+++RL+ L P ++D +DL +N D +
Sbjct: 1 MRVADFSFDLPDELIARYPTAQRNASRLL----TLDGPTGALADKQFTDLFEMINPGDLM 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + ++ + + + R SK K +++
Sbjct: 57 VFNNTRVIPARLFGQKATG-----GKLEILVERMLDDKRILAHVRSSKSPKVDTLINL-- 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
DG+ +++ LL LE+ VG +PLPPYI RP + D
Sbjct: 110 -DGEHQMKMIARHDALFELELLSELTILEVLEQ----VGHMPLPPYI--DRPDEDADKER 162
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y K G+VAAPTAGLHF +LS L G+ + FVTLHVGAGTF PV+V++ +H
Sbjct: 163 YQTVYNKTPGAVAAPTAGLHFDDAMLSALKHKGVNIAFVTLHVGAGTFQPVRVDNVLEHK 222
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE--DGIINPWSGFTNIFI 297
MHSE + + K+ G R+++VGTTS+R LE+A D + +SG T+IFI
Sbjct: 223 MHSEWADVPQDVVDLIAQTKAAGNRVIAVGTTSVRSLESAAKACGDKPLATFSGDTDIFI 282
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY F+ VD +++NFHLP+STL+ML+SAF G++E + YQHAI+ YRF+SYGD L
Sbjct: 283 YPGYEFKVVDAMVTNFHLPESTLIMLISAFTGVDEVRYAYQHAIAQKYRFFSYGDAMFLT 342
Query: 358 QK 359
+K
Sbjct: 343 KK 344
>gi|297621197|ref|YP_003709334.1| S-adenosylmethionine tRNA ribosyltransferase [Waddlia chondrophila
WSU 86-1044]
gi|297376498|gb|ADI38328.1| S-adenosylmethionine tRNA ribosyltransferase [Waddlia chondrophila
WSU 86-1044]
Length = 341
Score = 239 bits (610), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 147/357 (41%), Positives = 197/357 (55%), Gaps = 22/357 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ + FDLP IA PV PRD +RLMV+ + I + +LP FL D IVFN
Sbjct: 5 LESYQFDLPEDLIAKVPVTPRDHSRLMVIDRSSG---KIEEIPFYELPQFLGDGDRIVFN 61
Query: 63 NTKVITAQLNGVRFCHINRREK--EISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NTKVI A+L I R+E ++ L + W ARP++ +KKG +
Sbjct: 62 NTKVIPARL-------IGRKETGGQVELLLLEEKTEGVWLTMARPARKLKKGTKVIV--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
RL A +I++ + G L+ F G+ E ++ G +PLPPY+ R + D Y
Sbjct: 112 --SDRLCAEMIEELDEGMRLVRFDYEGLFWE-VLAAHGEMPLPPYLQRDE-LPKLDRERY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK G+VAAPTAGLHFT LL L G+ + +TLHVG GTF PV + +H M
Sbjct: 168 QTIYAKHAGAVAAPTAGLHFTKTLLEELTEKGVDIVEITLHVGLGTFRPVTAKTITEHKM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E +I A LN R + VGTT R LE+A E G + G T+IFI PG
Sbjct: 228 HEERYWITQEAASRLNRPAKRE---ICVGTTCCRALESAVNEQGNVFSGEGRTDIFIRPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ V L++NFHLP STL+MLVSAF G + T Y+ A+ +RF+SYGD L+
Sbjct: 285 YQFKKVTSLLTNFHLPGSTLMMLVSAFAGYDLTMNAYKKAVLDKFRFFSYGDAMLIL 341
>gi|261252138|ref|ZP_05944711.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
orientalis CIP 102891]
gi|260935529|gb|EEX91518.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
orientalis CIP 102891]
Length = 350
Score = 239 bits (610), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 146/370 (39%), Positives = 212/370 (57%), Gaps = 33/370 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N + D +D+ + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQPERTASRLLQMDGNTG---ELVDGTFTDVLEQVQPGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCH------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
FNNT+VI A++ G + + R E S H+R S + +P I G+
Sbjct: 58 FNNTRVIPARMFGRKESGGKLEVLVERVVDEKSILAHVRCSKSP-----KPGSTIFVGEN 112
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
F +Q +R +A K+N+ + +L + +G +PLPPYI RP +
Sbjct: 113 DEFSAQ-MVARHDALFELKFNSEQNVLAV----------LEEIGHMPLPPYI--DRPDED 159
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D YQT Y + G+VAAPTAGLHF LL ++ + G + +VTLHVGAGTF PVKV+D
Sbjct: 160 SDKERYQTVYNEKPGAVAAPTAGLHFDEPLLEKIKAKGAEFAYVTLHVGAGTFQPVKVDD 219
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-----INPW 289
+H MH+E + A+N+ K+RGGRI++VGTTS+R LE+A +D + + P+
Sbjct: 220 IHEHHMHAEYVEVPQEVVDAINATKARGGRIIAVGTTSVRSLESA-AQDALKKGTELVPF 278
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
G T IFI PGY ++ VD L++NFHLP+STL+MLVSAF G + T Y+HA+ + YRF+S
Sbjct: 279 FGDTEIFIFPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYDNTMNAYKHAVENKYRFFS 338
Query: 350 YGDTSLLFQK 359
YGD+ + +K
Sbjct: 339 YGDSMFIKKK 348
>gi|289208484|ref|YP_003460550.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thioalkalivibrio sp. K90mix]
gi|288944115|gb|ADC71814.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thioalkalivibrio sp. K90mix]
Length = 355
Score = 239 bits (610), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 143/356 (40%), Positives = 198/356 (55%), Gaps = 20/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD++LP IA P+ R S+RL+V+ + D + + L D +V
Sbjct: 1 MRVSDFDYELPQELIAQYPLPERGSSRLLVLEDKQA-----EDATFGAIESLLRPGDLLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A++ G + ++ + SP R S+ K G LH
Sbjct: 56 LNDTRVIPARVFGQKASG-----GQVEVLVERIESPTQVLAMVRASRAPKPGTRLHLADA 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
V D+ G + + G ++ + G IPLPPYI +R + D Y
Sbjct: 111 -----FTVEVTDR--QGPFFRLRLVDGADMLALLKQHGHIPLPPYI--ERADEGSDAERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +G+VAAPTAGLHF LL RL + G++ VTLHVGAGTF PVKV+DT H M
Sbjct: 162 QTVFARKEGAVAAPTAGLHFDDALLGRLRAQGVETATVTLHVGAGTFQPVKVDDTSRHEM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + A+ + K RGGR+V+VGTT +R LETA E G + P+ G T +FI PG
Sbjct: 222 HAEWLEVGPEACAAVAACKVRGGRVVAVGTTCVRSLETAAAE-GELTPFQGETRLFIQPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRFR VD +++NFHLP+STLLMLV+AF G Y HA+++ YRF+SYGD L
Sbjct: 281 YRFRVVDRMVTNFHLPQSTLLMLVAAFAGYRRILDAYAHAVANRYRFFSYGDAMWL 336
>gi|317495474|ref|ZP_07953842.1| tRNA ribosyltransferase-isomerase [Gemella moribillum M424]
gi|316914288|gb|EFV35766.1| tRNA ribosyltransferase-isomerase [Gemella moribillum M424]
Length = 342
Score = 239 bits (610), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 145/357 (40%), Positives = 206/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++FDF LP IA P+ RD+++L+ + + SD+ + + D +V
Sbjct: 1 MKLEQFDFYLPEELIAQTPLLKRDTSKLLCIDKKENN---YEHKTFSDIIDYFEAGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + I L N W +P+K IK G ++ F
Sbjct: 58 LNNTRVMPARLYGQK----KDTGAAIEVLLLKNEVDNIWECLVKPAKRIKIGSVVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +EA + G F GI ER + +GT+PLPPYI + R Y
Sbjct: 111 -GDGIMEAICTRVLDDGFRYFEFKYEGIFQER-LDELGTMPLPPYIKERLTDKER----Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT+ LL ++ + G+ V ++TLHVG GTF PV VE+ ++H M
Sbjct: 165 QTVYSKEVGSSAAPTAGLHFTNELLDKIKAKGVNVAYLTLHVGLGTFRPVAVENIEEHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE +D TA+ +N K GRI SVGTT+ R LET A +G I SG+TNIFI P
Sbjct: 225 HSEYYTLDEKTAEIINKTKENNGRIFSVGTTTTRTLETIARDNNGKIVAASGWTNIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
G++F+ VD L++NFHLPKS+L+MLVSAF E+ +Y+ A+ + YRF+S+GD ++
Sbjct: 285 GFKFKCVDGLITNFHLPKSSLIMLVSAFYEREKILDLYKIAVENKYRFFSFGDAMII 341
>gi|326335244|ref|ZP_08201439.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Capnocytophaga sp. oral taxon 338 str. F0234]
gi|325692515|gb|EGD34459.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Capnocytophaga sp. oral taxon 338 str. F0234]
Length = 349
Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 142/360 (39%), Positives = 195/360 (54%), Gaps = 16/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F+F+LP +A P RD ARLMVVH I L D+ + + D V
Sbjct: 1 MKLSSFNFNLPKELLAEYPSENRDEARLMVVHRKTEK---IEHRLFKDVIDYFDDGDVFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
NNTKV A+L G H + +I L ++ W V P++ I+ G+ L F
Sbjct: 58 LNNTKVFPARLYG----HKEKTNAKIEVFLLRELNKEQRLWDVLVDPARKIRIGNKLFF- 112
Query: 119 SQDGQSRLEATVIDKWNT-GEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
D + L A VID + G L +F S ++ +G PLP YI+R P++ D
Sbjct: 113 --DPEEELVAEVIDNTTSRGRTLRFLFDGSYEGFRNKLLELGHTPLPKYISR--PVEPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ L+ RL GI +TLH+G GTF PV+VED
Sbjct: 169 EERYQTIYAKYEGAVAAPTAGLHFSKQLMKRLEIKGINFAELTLHIGLGTFNPVEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I +N K G R+ +VGTT +R +E++ + +NP+ G+TN F
Sbjct: 229 KHKMDSEEIIIPQEACDIVNKAKEAGKRVCAVGTTVMRAMESSVSSHNTLNPFIGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH PKSTLLM+VSAF G E Y+ A+ Y+F+SYGD L+
Sbjct: 289 IFPPYDFGVANAMITNFHTPKSTLLMMVSAFAGHELIMNAYEEAVKEKYKFFSYGDAMLI 348
>gi|92114949|ref|YP_574877.1| S-adenosylmethionine [Chromohalobacter salexigens DSM 3043]
gi|122419294|sp|Q1QTN0|QUEA_CHRSD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|91798039|gb|ABE60178.1| S-adenosylmethionine [Chromohalobacter salexigens DSM 3043]
Length = 356
Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 145/358 (40%), Positives = 206/358 (57%), Gaps = 19/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F FDLP IA P R RL+ + I+ +DL L D +V
Sbjct: 1 MQRADFHFDLPDELIARYPSETRSDCRLLCLDDATG---DIAHRRFTDLLTLLAPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + L + + + R SK + G L F
Sbjct: 58 FNDTRVIPARLFGQKAS-----GGRVEMLLERPLDAHRGLAHLRASKAPRPGTEL-IFEG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D + +EA + E+ + IEL + G +PLPPYI R+ +D R+ Y
Sbjct: 112 DVHAVVEARHDALF---ELRFLGETPMIEL---LENHGHMPLPPYIDREDELDDRER--Y 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +G+VAAPTAGLHF + L+ L G+++ +VTLHVGAGTF PV+V+D +H M
Sbjct: 164 QTVYARREGAVAAPTAGLHFDTPLMEALRERGVEMGYVTLHVGAGTFQPVRVDDIREHHM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE +D + + + ++RGGR+++VGTTS+R LETA+ EDG I P+ G T+IFI
Sbjct: 224 HSEWLEVDETLCRQVEATRARGGRVIAVGTTSVRCLETASQGQEDGHIAPFRGDTDIFIY 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY++R VD L++NFHLP+STLLMLVSAF G + + Y+ A++ Y F+SYGD L
Sbjct: 284 PGYQWRCVDALITNFHLPESTLLMLVSAFAGYPQVMRAYRAAVAERYAFFSYGDAMFL 341
>gi|283834277|ref|ZP_06354018.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Citrobacter
youngae ATCC 29220]
gi|291069802|gb|EFE07911.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Citrobacter
youngae ATCC 29220]
Length = 354
Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 147/363 (40%), Positives = 210/363 (57%), Gaps = 27/363 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P R S RL+ +L P H +DL LN D +
Sbjct: 1 MRVTDFTFELPESLIAHYPQAERSSCRLL----SLDGPTGALTHGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + R SK K G
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEVLVERMLDDKRILAHIRASKAPKPG--AELLL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARKRPIDAR 175
D +S ++AT++ + + +F + + ER + + +G +PLPPYI RP +
Sbjct: 110 GDDES-IKATMVARHDA-----LFEVE-FDDERSVLDILNAIGHMPLPPYI--DRPDEDA 160
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y++ G+VAAPTAGLHF LL++L GI++ FVTLHVGAGTF PV+V+
Sbjct: 161 DRELYQTVYSEKPGAVAAPTAGLHFDERLLAKLREKGIEMAFVTLHVGAGTFQPVRVDTI 220
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFT 293
+DHIMHSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ G T
Sbjct: 221 EDHIMHSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIAPFFGDT 280
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFI PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y A+ YRF+SYGD
Sbjct: 281 QIFIYPGYQYKVIDALVTNFHLPESTLIMLVSAFAGYKNTMHAYHEAVKAEYRFFSYGDA 340
Query: 354 SLL 356
+
Sbjct: 341 MFI 343
>gi|70732299|ref|YP_262055.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
fluorescens Pf-5]
gi|91207394|sp|Q4K6S8|QUEA_PSEF5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|68346598|gb|AAY94204.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
fluorescens Pf-5]
Length = 354
Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 148/355 (41%), Positives = 205/355 (57%), Gaps = 24/355 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R +RL+ L P ++ +DL L D +
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRGSRLL----TLDGPTGALAHRQFTDLLEHLRPGDLM 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 57 VFNNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRSSKSPKPGSKILI-- 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSIS-GIELERQISLVGTIPLPPYIARKRPIDARDYV 178
DG EA ++ + +T +F + E+ + VG +PLPPYI RP + D
Sbjct: 110 -DGGG--EAEMLARHDT-----LFELGFAEEVLPLLDRVGHMPLPPYI--DRPDEGADRE 159
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF PV+VE +DH
Sbjct: 160 RYQTVYAQRLGAVAAPTAGLHFDQPLLEAIAAKGVETAFVTLHVGAGTFQPVRVERIEDH 219
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH E + A+ + ++RGGR+V+VGTTS+R LE+A DG++ P+SG T+IFI
Sbjct: 220 HMHHEWLEVGQDVVDAVAACRARGGRVVAVGTTSVRSLESA-ARDGVLKPFSGDTDIFIY 278
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
PG F VD L++NFHLP+STLLMLVSAF G ET Y+ A+ + YRF+SYGD
Sbjct: 279 PGRPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYRAAVENGYRFFSYGDA 333
>gi|330815590|ref|YP_004359295.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia gladioli BSR3]
gi|327367983|gb|AEA59339.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia gladioli BSR3]
Length = 350
Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 145/361 (40%), Positives = 205/361 (56%), Gaps = 21/361 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDFDLPP IA + R ++RL+ V +++ P ++D +DLP + + D +VFN
Sbjct: 4 LSDFDFDLPPELIAQTALPERSASRLLEVDGSVA-PTRLTDRRFTDLPECIGAGDLLVFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKV+ A+ G + +I + + + R SK +G L
Sbjct: 63 DTKVLKARFFGQKASG-----GKIEVLVERVIGSRTVLAQVRSSKSPVEGSTLRL----- 112
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
E TV ++ L F + L I G +PLPPYI + DA D YQT
Sbjct: 113 AEAFEVTVGERVEPF-FTLHFPEDCLAL---IERHGRLPLPPYI--EHDPDATDETRYQT 166
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
+A G+VAAPTAGLHF LL+ L + G++ +TLHVGAGTF PV+V++ +H MHS
Sbjct: 167 VFASNPGAVAAPTAGLHFDEALLATLRARGVETATLTLHVGAGTFQPVRVDNIAEHKMHS 226
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT----TEDGIINPWSGFTNIFIT 298
E + + + ++RGG++V+VGTTS+R LE A E + P T+IFIT
Sbjct: 227 EWYELSDTLVAQIAATRARGGKVVAVGTTSMRALEAAARDAQREGRALAPTRAETDIFIT 286
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY FR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI+ YRF+SYGD LL +
Sbjct: 287 PGYAFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIRDAYRHAIAERYRFFSYGDAMLLTR 346
Query: 359 K 359
+
Sbjct: 347 R 347
>gi|260776672|ref|ZP_05885567.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
coralliilyticus ATCC BAA-450]
gi|260607895|gb|EEX34160.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
coralliilyticus ATCC BAA-450]
Length = 350
Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 145/370 (39%), Positives = 211/370 (57%), Gaps = 33/370 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N +SD +D+ + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQPERTASRLLQLDGNSG---ELSDGTFTDVLEQVQPGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCH------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
FNNT+VI A++ G + + R E S H+R S + +P I G+
Sbjct: 58 FNNTRVIPARMFGRKESGGKLEVLVERVLDEKSILAHVRCSKSP-----KPGSTILIGEN 112
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
+ +Q +R +A K+N + +L + +G +PLPPYI RP +
Sbjct: 113 DEYSAQ-MVARHDALFELKFNAEKNVLAV----------LEEIGHMPLPPYI--DRPDED 159
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D YQT Y + G+VAAPTAGLHF LL ++ + G + +VTLHVGAGTF PVKVE+
Sbjct: 160 SDKERYQTVYNEKPGAVAAPTAGLHFDEALLEKIKAKGAEFAYVTLHVGAGTFQPVKVEN 219
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-----INPW 289
+DH MH+E + A+N+ K+R R+++VGTTS+R LE+A +D + + P+
Sbjct: 220 INDHHMHAEYVEVPQEVVDAINAAKARNSRVIAVGTTSVRSLESA-AQDALKKGTALAPF 278
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
G T IFI PGY ++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ + YRF+S
Sbjct: 279 FGDTEIFIYPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYENTMNAYKHAVENKYRFFS 338
Query: 350 YGDTSLLFQK 359
YGD+ + +K
Sbjct: 339 YGDSMFIKKK 348
>gi|209695860|ref|YP_002263790.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Aliivibrio
salmonicida LFI1238]
gi|226713833|sp|B6EK66|QUEA_ALISL RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|208009813|emb|CAQ80120.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Aliivibrio
salmonicida LFI1238]
Length = 350
Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 140/366 (38%), Positives = 211/366 (57%), Gaps = 25/366 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ ++ N + D +D+ + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPQPERTASRLLHLNGNSGE---LHDGQFTDVLDLVQHGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ GV+ ++ + + +S + R SK K G+ L
Sbjct: 58 FNNTRVIPARMFGVKAS-----GGKLEVLVERVLDDHSVLAHVRCSKSPKPGNQLWLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISL---VGTIPLPPYIARKRPIDARDY 177
EA ++ + +T +F I ++ + + +G +PLPPYI RP + D
Sbjct: 113 ---QEYEAEMVARHDT-----LFEIRFTSEKKVLDILDEIGHMPLPPYI--DRPDEDADK 162
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT Y + G+VAAPTAGLHF +++L ++ + G++ +VTLHVGAGTF PV+V++ D
Sbjct: 163 ERYQTVYNEKPGAVAAPTAGLHFDTDILEKMKAKGVEFAYVTLHVGAGTFQPVRVDNILD 222
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFT 293
H MHSE + A+ + K+RGGR++SVGTTS+R LE+A + + P+ T
Sbjct: 223 HHMHSEYAEVSQEVVDAIKATKARGGRVISVGTTSVRSLESAAQHALKQGTELAPFFDDT 282
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFI PGY F+ VD L++NFHLP+STL+MLVSAF G + T K Y A++H YRF+SYGD
Sbjct: 283 EIFIYPGYEFQVVDALVTNFHLPESTLIMLVSAFAGYDNTMKAYDQAVNHQYRFFSYGDA 342
Query: 354 SLLFQK 359
+ +K
Sbjct: 343 MFITKK 348
>gi|238765174|ref|ZP_04626106.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
kristensenii ATCC 33638]
gi|238696608|gb|EEP89393.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
kristensenii ATCC 33638]
Length = 356
Score = 239 bits (609), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 150/363 (41%), Positives = 214/363 (58%), Gaps = 27/363 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P R RL+ +L P H + +DL L D +
Sbjct: 1 MRVADFSFELPESLIAHYPQPQRSGCRLL----SLDGPTGTLTHGIFTDLLDKLVPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + ++ + + + + + SK K G L
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKLEVLVERVLDDHRVLAHVKASKAPKPGTEL--LL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARKRPIDAR 175
D +S + AT++ + +T +F + + ER + + VG +PLPPYI RP +
Sbjct: 110 GDDES-IRATMLARHDT-----LFELR-FDDERDVFTILNAVGHMPLPPYI--DRPDEDA 160
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y++ G+VAAPTAGLHF +L+ L GI++ FVTLHVGAGTF PV+VE
Sbjct: 161 DRELYQTVYSQRPGAVAAPTAGLHFDEPMLAALREKGIEMAFVTLHVGAGTFQPVRVETI 220
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFT 293
+DHIMHSE + A+ + K+RG R+V+VGTTS+R LE+A +++G+I P+ G T
Sbjct: 221 EDHIMHSEYAEVPQEVVDAVLACKARGNRVVAVGTTSVRSLESAAKASDNGLIAPFFGDT 280
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFI PGY+++ VD L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD
Sbjct: 281 RIFIYPGYQYQIVDALITNFHLPESTLIMLVSAFAGYKNTMNAYQQAVAEQYRFFSYGDA 340
Query: 354 SLL 356
+
Sbjct: 341 MFI 343
>gi|16331808|ref|NP_442536.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechocystis sp. PCC 6803]
gi|3914540|sp|Q55850|QUEA_SYNY3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|1001768|dbj|BAA10606.1| queuosine biosynthesis protein; QueA [Synechocystis sp. PCC 6803]
Length = 366
Score = 239 bits (609), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 142/361 (39%), Positives = 204/361 (56%), Gaps = 24/361 (6%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
+D+ LP IA P PRD +RL+VV P + DL +L D +V N+TK
Sbjct: 10 YDYHLPADCIAQTPAVPRDHSRLLVV----KDPFTVDHQHFYDLGNYLKPGDLLVLNDTK 65
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQS- 124
V+ A+L+G + + + L + N W +P K +K G + F ++DG+
Sbjct: 66 VMPARLHGQKENGVA-----VEILLLTECTENQWIALVKPGKRLKLGAKVKFPARDGEKP 120
Query: 125 RLEATVIDKWN-TGEILLVFSIS-GIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
L AT++ + + TG LL F + G L + G IP PPYI ++ + + YQT
Sbjct: 121 DLWATILQRDDATGGRLLEFVLEPGQRLWDVLPDYGEIPFPPYIGDRQATNDQ----YQT 176
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ G+VAAPTAGLHFT L ++L G++ VTLHVG GTF PV+ E+ DH+MH
Sbjct: 177 IYAEKLGAVAAPTAGLHFTEELFTKLAQQGVQTAKVTLHVGIGTFRPVEAENILDHVMHQ 236
Query: 243 EIGFIDAP--TAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI----INPWSGFTNIF 296
E +ID P T + + ++ GGRI +VGTT +R LE E + P+ G T++F
Sbjct: 237 E--WIDVPPTTVEVIEKTRASGGRIFAVGTTVVRCLEGMAQESDFPRQPLQPFRGQTDLF 294
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY++R VD L++NFHLPKS+LLMLVSA +Y+ AI+ YRFYS+GD ++
Sbjct: 295 IYPGYQWRLVDGLITNFHLPKSSLLMLVSALISRPRLMAIYETAIAKGYRFYSFGDAMVI 354
Query: 357 F 357
Sbjct: 355 L 355
>gi|238783641|ref|ZP_04627662.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
bercovieri ATCC 43970]
gi|238715519|gb|EEQ07510.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
bercovieri ATCC 43970]
Length = 361
Score = 239 bits (609), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 150/363 (41%), Positives = 213/363 (58%), Gaps = 27/363 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P R RL+ +L P H + +DL L D +
Sbjct: 6 MRVADFSFELPESLIAHYPQSQRSGCRLL----SLDGPTGTLTHGIFTDLLDKLEPGDLL 61
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + ++ + + + + + SK K G L
Sbjct: 62 VFNNTRVIPARLFGRKASG-----GKLEVLVERVLDDHRVLAHVKASKSPKPGTEL--LL 114
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARKRPIDAR 175
D +S + AT++ + +T +F + + ER + + VG +PLPPYI RP +
Sbjct: 115 GDDES-IRATMLARHDT-----LFELR-FDDERDVFTILNAVGHMPLPPYI--DRPDEDA 165
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y++ G+VAAPTAGLHF +L+ L GI++ FVTLHVGAGTF PV+V+
Sbjct: 166 DRELYQTVYSERPGAVAAPTAGLHFDEPMLAALREKGIEMAFVTLHVGAGTFQPVRVDTI 225
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFT 293
++HIMHSE + A+ + K+RG R+V+VGTTS+R LE+A TE+G+I P+ G T
Sbjct: 226 EEHIMHSEYAEVPQQVVDAVLACKARGKRVVAVGTTSVRSLESAAKATENGLIAPFFGDT 285
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFI PGY ++ VD L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD
Sbjct: 286 RIFIYPGYEYQVVDALVTNFHLPESTLIMLVSAFAGYKNTMNAYQQAVAEQYRFFSYGDA 345
Query: 354 SLL 356
+
Sbjct: 346 MFI 348
>gi|296101526|ref|YP_003611672.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterobacter cloacae subsp. cloacae ATCC 13047]
gi|295055985|gb|ADF60723.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterobacter cloacae subsp. cloacae ATCC 13047]
Length = 356
Score = 239 bits (609), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 147/360 (40%), Positives = 210/360 (58%), Gaps = 27/360 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP + IA P+ R S RL+ +L P H +DL LN D +
Sbjct: 1 MRVADFSFELPETLIAHYPMPERSSCRLL----SLDGPTGELTHGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEVLVERMLDDKRILAHIRASKAPKPGAEL--LL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARKRPIDAR 175
D +S ++AT+ + + +F + ER + + +G +PLPPYI +RP +
Sbjct: 110 GDDES-IKATMTARHDA-----LFEVE-FNDERTVLDILNAIGHMPLPPYI--ERPDEEA 160
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+
Sbjct: 161 DRELYQTVYSQKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDSI 220
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFT 293
+DHIMHSE + A+ + K+RG R+V+VGTTS+R LE+A + +I P+ G T
Sbjct: 221 EDHIMHSEYAEVPQEVVDAVLAAKARGSRVVAVGTTSVRSLESAAQAAQKDLIEPFFGDT 280
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFI PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD
Sbjct: 281 QIFIYPGYQYKVIDALVTNFHLPESTLIMLVSAFAGYQHTMAAYKSAVEQKYRFFSYGDA 340
>gi|123443376|ref|YP_001007350.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|166218757|sp|A1JNT4|QUEA_YERE8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|122090337|emb|CAL13204.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
enterocolitica subsp. enterocolitica 8081]
Length = 362
Score = 239 bits (609), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 150/360 (41%), Positives = 212/360 (58%), Gaps = 27/360 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P R RL+ +L P H + +DL L D +
Sbjct: 1 MRVADFSFELPESLIAHYPQPQRSGCRLL----SLDGPTGALTHGIFTDLLDKLVPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + ++ + + + + + SK K G L
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKLEVLVERVLDDHRVLAHVKASKAPKPGTEL--LL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARKRPIDAR 175
D +S + AT++ + +T +F + + ER + VG +PLPPYI RP +
Sbjct: 110 GDDES-IHATMLARHDT-----LFELR-FDDERDVFTILDAVGHMPLPPYI--DRPDEDA 160
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y++ G+VAAPTAGLHF +L+ L GI++ FVTLHVGAGTF PV+VE
Sbjct: 161 DRELYQTVYSQRLGAVAAPTAGLHFDEPMLAALREKGIEMAFVTLHVGAGTFQPVRVETI 220
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFT 293
+DHIMHSE + A+ + K+RG R+V+VGTTS+R LE+A ++++G+I P+ G T
Sbjct: 221 EDHIMHSEYAEVPQEVVDAVLACKARGNRVVAVGTTSVRSLESAAKSSDNGLIAPFFGDT 280
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFI PGY ++ VD L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD
Sbjct: 281 KIFIYPGYHYQVVDALITNFHLPESTLIMLVSAFAGYKNTMNAYQQAVAEQYRFFSYGDA 340
>gi|328954311|ref|YP_004371645.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Desulfobacca acetoxidans DSM 11109]
gi|328454635|gb|AEB10464.1| S-adenosylmethionine:tRNAribosyltransferase-isom erase
[Desulfobacca acetoxidans DSM 11109]
Length = 353
Score = 239 bits (609), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 141/361 (39%), Positives = 205/361 (56%), Gaps = 21/361 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+ LPP IA P+ RD AR++V+ VI + LP FL+ D +V N
Sbjct: 6 INDYDYHLPPQLIAQEPLPQRDQARMLVLERAAG---VIRHCRFTQLPEFLSDRDVLVVN 62
Query: 63 NTKVITAQLNG-------VRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
NT+V A+L G V + E + + + +W ++P KV G +L
Sbjct: 63 NTQVFPARLRGCKASGGRVEVLLLQPPTPEGNGDVPRQARVPAWYRASKPPKV---GQML 119
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
+F + LE + GEI L+ G ++ + ++ G +PLPPYI +R
Sbjct: 120 NFGLE-----LEGEITAVGPAGEITLLLQSQGRDIRQVVAEAGAMPLPPYI--RRLAGPE 172
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D + YQT +A G++AAPTAGLHFT LL +L + G++V +TLHVG GTF PV+ ED
Sbjct: 173 DTLRYQTIFAHRLGAIAAPTAGLHFTPALLHQLEAGGVEVVSLTLHVGPGTFQPVREEDY 232
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
H + E + A +A A+N ++ G IV+VGTT++R+LE+ + G + G+ ++
Sbjct: 233 SRHRLAPEYFLLSAESAAAINRARAGGKHIVAVGTTTVRVLESQYCQ-GQVFAGEGYCDL 291
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI P YRF VD L++NFHLPKSTLL+LVSAF G E + YQ AI+ YRFYSYGD L
Sbjct: 292 FIYPRYRFNVVDRLITNFHLPKSTLLLLVSAFAGREFVLRAYQEAIAARYRFYSYGDCML 351
Query: 356 L 356
+
Sbjct: 352 I 352
>gi|326575583|gb|EGE25507.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Moraxella
catarrhalis O35E]
Length = 369
Score = 239 bits (609), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 152/362 (41%), Positives = 208/362 (57%), Gaps = 22/362 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+++ ++D+ LP IA P+ R S+RL+ V N SC D +DLP L S D +V
Sbjct: 8 VLLSDYDYHLPDDLIARYPLNERTSSRLLHVSKN-SC----QDLRFTDLPNLLKSGDLLV 62
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSV--YARPSKVIKKGDILHFF 118
N+TKVI A+L+G + E I L ++ N + + R S+ K G L+
Sbjct: 63 LNDTKVIKARLHGQKQTG-GAVEVLIERILPDEINNNLYKALCHVRSSRSPKVGQTLNL- 120
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
++++ATVI + + IL S +L+ G +P+PPY RK D D
Sbjct: 121 ---ANNQMQATVIGRQDNLFILGFRSPILADLDN----YGQMPIPPYFERK--ADETDDE 171
Query: 179 DYQTTYAK--IQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT + SVAAPTA LHF LL++L G+++ FVTLHVG+GTF PVKV++
Sbjct: 172 RYQTVFHNPTKSASVAAPTASLHFDDALLTQLRKKGVQIAFVTLHVGSGTFTPVKVDNLA 231
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE--DGIINPWSGFTN 294
DH+MH+E + A TA +N+ KS GGRI++VGTT R LETA G + + G T
Sbjct: 232 DHVMHAEYAHLPASTATLINNTKSAGGRIIAVGTTVTRTLETAHRHRIHGELVEFLGDTQ 291
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI P Y F VD L++NFHLPKSTLLMLVSAF G + ++ Y HAI + YRF+SYGD
Sbjct: 292 IFIYPPYEFGVVDCLITNFHLPKSTLLMLVSAFAGTQTIQEAYNHAIKNKYRFFSYGDAM 351
Query: 355 LL 356
L
Sbjct: 352 FL 353
>gi|121609294|ref|YP_997101.1| queuosine biosynthesis protein [Verminephrobacter eiseniae EF01-2]
gi|121553934|gb|ABM58083.1| Queuosine biosynthesis protein [Verminephrobacter eiseniae EF01-2]
Length = 384
Score = 239 bits (609), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 145/368 (39%), Positives = 211/368 (57%), Gaps = 21/368 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF LPP IA P R +ARL+ + P V D + +LP L + D +V N
Sbjct: 15 LSDFDFTLPPELIAQHPAPERSAARLL---DGRTAPPV--DRIFRELPGLLRAGDLLVSN 69
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRV--SPNSWSVYARPSKVIKKGDILHFFSQ 120
+T+V+ A+L G + + E I L + N + + + K + G +
Sbjct: 70 DTRVLNARLFGAK-ASGGKLELLIERVLPAAAGSAGNEVAAHMKVGKKPQPGSTVQIAGG 128
Query: 121 DGQSRLEATVIDKWNTGE-ILLVFSISGIELERQISLV---GTIPLPPYIARKR-----P 171
+AT++ +W T + L F++ G E L+ G +PLPPYI R++ P
Sbjct: 129 RQAGGFDATLLGRWPTADGPLYRFALHGPANESPWELMQRHGHLPLPPYIVRRQNTGHDP 188
Query: 172 IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK 231
A D YQT +A+ G+VAAPTA LHF ++LS L + GI+ +TLHVGAGTF+PVK
Sbjct: 189 HGAEDSQRYQTLFARHPGAVAAPTAALHFDQSVLSALAARGIEHASITLHVGAGTFLPVK 248
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSG 291
E+ + H MHSE + T AL + RG R+V+VGTT++R LE+ G+ +G
Sbjct: 249 TENLEQHRMHSEWYRLPPSTLTALERCRQRGARVVAVGTTTVRTLES-WARSGLA---TG 304
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T+IFITPG+ F+ VD+L++NFHLPKSTL+MLVSAF G +Y+HA++ YRF+SYG
Sbjct: 305 ETSIFITPGFPFQVVDLLITNFHLPKSTLMMLVSAFAGHAHVMALYRHAMAQRYRFFSYG 364
Query: 352 DTSLLFQK 359
D LL ++
Sbjct: 365 DAMLLARQ 372
>gi|120609290|ref|YP_968968.1| queuosine biosynthesis protein [Acidovorax citrulli AAC00-1]
gi|120587754|gb|ABM31194.1| Queuosine biosynthesis protein [Acidovorax citrulli AAC00-1]
Length = 369
Score = 239 bits (609), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 150/370 (40%), Positives = 209/370 (56%), Gaps = 25/370 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF LPP IA P R ++RL+ ++ D + +LP L D +VFN
Sbjct: 12 LSDFDFSLPPELIAQHPAPERSASRLLDGRADVPV-----DRIFRELPGLLQPGDLLVFN 66
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKK---GDILHFFS 119
+T+V+ A++ G + + E I L V A KV KK G +LH
Sbjct: 67 DTRVVKARVFGEK-ASGGKVELLIERVLVGTGGEAGNEVVAH-MKVSKKPAVGAMLHMAG 124
Query: 120 QDGQSRLEATVIDKW-NTGEILLVFSISGIELERQISLV---GTIPLPPYIARKR----- 170
AT++ +W + L F++S + +L+ G IPLPPYI R +
Sbjct: 125 GPAGGGFGATLLGRWPDEDGPLFRFALSSPDGAGPHALMERHGHIPLPPYIERHQEGGGD 184
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
P A D YQT +A+ G+VAAPTA LHF +L+ L + G++ VTLHVGAGTF PV
Sbjct: 185 PDAAEDAERYQTVFARAPGAVAAPTAALHFDEGVLASLAARGVERASVTLHVGAGTFQPV 244
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPW 289
K E DH MHSE + T AL + RGGR+V+VGTT++R LE+ A + G
Sbjct: 245 KTESLADHRMHSEWYEVPLATLAALERCRQRGGRVVAVGTTTVRTLESWARSGQG----- 299
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
+G T+IFITPG+ F+ VD+L++NFHLPKSTL+ML+SAF G E +Y+HAI+ YRF+S
Sbjct: 300 TGDTDIFITPGFAFQVVDLLVTNFHLPKSTLMMLISAFTGYEHAMDLYRHAIAQRYRFFS 359
Query: 350 YGDTSLLFQK 359
YGD LL ++
Sbjct: 360 YGDAMLLARR 369
>gi|238752761|ref|ZP_04614230.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
rohdei ATCC 43380]
gi|238709019|gb|EEQ01268.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
rohdei ATCC 43380]
Length = 356
Score = 239 bits (609), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 157/364 (43%), Positives = 216/364 (59%), Gaps = 29/364 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P R RL+ +L P H + +DL L D +
Sbjct: 1 MRVADFSFELPESLIAHYPQPQRSGCRLL----SLDGPTGKLTHGIFTDLLDKLEPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSV-YARPSKVIKKGDILHFF 118
VFNNT+VI A+L G R + E L RV +S + + + SK K G L
Sbjct: 57 VFNNTRVIPARLFG-RKASGGKLE-----VLVERVLDDSRVLAHVKASKAPKPGTEL--L 108
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARKRPIDA 174
D +S + AT++ + +T +F + + ER + + VG +PLPPYI RP +
Sbjct: 109 LGDDES-IRATMVARHDT-----LFELR-FDDERDVFAILNAVGHMPLPPYI--DRPDED 159
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D YQT Y++ G+VAAPTAGLHF LL+ L GI++ FVTLHVGAGTF PV+V+
Sbjct: 160 ADRELYQTVYSERPGAVAAPTAGLHFDEPLLAALREKGIEMAFVTLHVGAGTFQPVRVDT 219
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGF 292
++HIMHSE + A+ + K+RG R+V+VGTTS+R LE+A TE+G+I P+ G
Sbjct: 220 IEEHIMHSEYAEVPQEVVDAVLACKARGKRVVAVGTTSVRSLESAAKATENGLIAPFFGD 279
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T IFI PGY ++ VD L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD
Sbjct: 280 TCIFIYPGYDYQVVDALVTNFHLPESTLIMLVSAFAGYKNTMNAYQQAVTEQYRFFSYGD 339
Query: 353 TSLL 356
+
Sbjct: 340 AMFI 343
>gi|291613426|ref|YP_003523583.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Sideroxydans lithotrophicus ES-1]
gi|291583538|gb|ADE11196.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Sideroxydans lithotrophicus ES-1]
Length = 340
Score = 239 bits (609), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 144/364 (39%), Positives = 201/364 (55%), Gaps = 28/364 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P R ++RL+ V + D +DL ++ +D +V
Sbjct: 1 MRTDDFDFILPERLIAQHPPLQRGASRLLQVGKT-----GLKDSQFADLHGLVHGHDLLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV----SPNSWSVYARPSKVIKKGDILH 116
N+T+V+ A+L G EKE + + V + R SK K G L
Sbjct: 56 LNDTRVLKARLFG---------EKESGGKVEVLVERVLGEHEVLAQVRASKTPKPGSRLL 106
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
+L V+ + GE + + + G +PLPPYIA A D
Sbjct: 107 L-----AEKLRVKVLGR--EGEFFHLCFEGAAAVTALLERYGHLPLPPYIAH--VAGAED 157
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT +A+ G+VAAPTAGLHF +L L + + +VTLHVGAGTF PV+ E+ +
Sbjct: 158 EERYQTVFAREPGAVAAPTAGLHFGETMLQALRDKKVDIAYVTLHVGAGTFKPVRAENIE 217
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+H+MHSE I T A+ K++GGRI++VGTTSLR LE+A G + SG T+IF
Sbjct: 218 EHVMHSERYTIPQATVDAIREAKAKGGRIIAVGTTSLRALESAAA-SGELVAGSGETSIF 276
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRF VD+L++NFHLP+STLLMLV AF G+E+ Y+HA+ YRF+SYGD L+
Sbjct: 277 ITPGYRFGVVDVLLTNFHLPRSTLLMLVCAFGGMEKMLAAYRHAVEKEYRFFSYGDAMLI 336
Query: 357 FQKR 360
+++
Sbjct: 337 EREQ 340
>gi|283780730|ref|YP_003371485.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Pirellula
staleyi DSM 6068]
gi|283439183|gb|ADB17625.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Pirellula
staleyi DSM 6068]
Length = 349
Score = 239 bits (609), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 141/355 (39%), Positives = 200/355 (56%), Gaps = 15/355 (4%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
+DF+LP +A P+ R ARL+VV I H + DLP L D +V N+T+
Sbjct: 7 YDFELPRDLVAQHPLPHRTDARLLVVD---RAKQSIDHHHIRDLPGLLRYGDHLVMNDTR 63
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPN---SWSVYARPSKVIKKGDILHFFSQDG 122
VI A+L G RRE+ + + +S + +W V + + G+ + S D
Sbjct: 64 VIPARLVG-------RREQTGARWSGLFLSADDQGNWQVLGKTRGKLLPGEAILVLSWDL 116
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ ++ ++ K G ++ G E + VG +PLPPYI I+A D +YQT
Sbjct: 117 RQSIKLRLLTKLEGGVWVVRPEPLGDPWE-LLDSVGRVPLPPYIRDGEMIEA-DSTNYQT 174
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
+AK +G+VAAPTAGLHFT LL ++ G+ VTLHVG GTF PV E +H+MHS
Sbjct: 175 VFAKTRGAVAAPTAGLHFTPELLEKVKVAGVLSSHVTLHVGLGTFRPVTAEKLAEHVMHS 234
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E + P + + KSRGGR+++VGTT R LE+A G + P+SG TN+FI P +
Sbjct: 235 EFCDVSQPAVETILKTKSRGGRVIAVGTTVARSLESAAAPTGKLEPFSGPTNLFIRPPFT 294
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F +D L++NFHLP+STLL+LV F G E ++ Y+ AI YRFYSYGD L+
Sbjct: 295 FCVLDGLLTNFHLPRSTLLVLVRTFGGDELIQQAYREAIEERYRFYSYGDAMLIL 349
>gi|257462420|ref|ZP_05626834.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. D12]
gi|317060084|ref|ZP_07924569.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. D12]
gi|313685760|gb|EFS22595.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. D12]
Length = 343
Score = 239 bits (609), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 143/359 (39%), Positives = 203/359 (56%), Gaps = 24/359 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++++D+DLP I P PRD A+L++++ + D D+ +L D +V N
Sbjct: 5 LQDYDYDLPEELIGQSPREPRDHAKLLLINRKTKK---LEDKYFYDILDYLQKGDVLVRN 61
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHM----RVSPNSWSVYARPSKVIKKGDILHFF 118
+TKVI A+L G +KE L + R ++W +P+K +K G + F
Sbjct: 62 STKVIPARLYG---------QKETGGVLEVLLVKRKDLDTWECLLKPAKKLKLGQKI-FI 111
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ + L A +++ G +L FS G E + +GT+PLPPYI K D
Sbjct: 112 GPNAE--LVAELLEIQEDGNRILKFSYEG-SFEENLDRLGTMPLPPYIVEK----LEDQE 164
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YAK SVAAPTAGLHFT LL ++ GI++ + L VG GTF PV+ ED +H
Sbjct: 165 MYQTVYAKRGESVAAPTAGLHFTKELLEKIQEKGIEIVDIYLEVGLGTFRPVQTEDVLNH 224
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH E+ I A+ +N K+ G RI+SVGTT+ R LE++ E+GI+ T+IFI
Sbjct: 225 KMHEELFEIPPEAAEKINRAKAEGRRIISVGTTTTRALESSVDENGILLAQKKNTDIFIY 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGYRF+ VD L++NFHLPKSTLLMLVSAF E +Y HA+ Y F+S+GD ++
Sbjct: 285 PGYRFQMVDALITNFHLPKSTLLMLVSAFSEREFMLDVYHHAVEQEYHFFSFGDAMFIY 343
>gi|300776948|ref|ZP_07086806.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Chryseobacterium gleum ATCC 35910]
gi|300502458|gb|EFK33598.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Chryseobacterium gleum ATCC 35910]
Length = 349
Score = 239 bits (609), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 141/364 (38%), Positives = 200/364 (54%), Gaps = 22/364 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F+FDLP +A P RD ARLMV+ I L D+ + + D +
Sbjct: 1 MKTSDFNFDLPAELLAEHPSEHRDEARLMVLDRKTQT---IEHKLFKDVVDYFDEEDLFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREK-----EISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
FNNTKV A+L G +EK E+ + W V P++ I+ G+ L
Sbjct: 58 FNNTKVFPARLYG-------NKEKTGAKIEVFLLRELDKETRVWDVLVDPARKIRIGNKL 110
Query: 116 HFFSQDGQSRLEATVIDKWNT-GEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPID 173
FF++D L A VID + G L +F S E ++ +G PLP YI KR ++
Sbjct: 111 -FFTED--ESLVAEVIDNTTSRGRTLRFLFDGSYEEFRSKLKELGETPLPKYI--KRAVE 165
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT YAK++G+VAAPTAGLHF+ +L+ RL GI VTLHVG GTF P++VE
Sbjct: 166 PEDAERYQTIYAKVEGAVAAPTAGLHFSKHLMKRLEIKGINFAEVTLHVGLGTFNPIEVE 225
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
D H M SE ID A +N R+ +VGTT++R LET+ + + I+ ++G+T
Sbjct: 226 DLSKHKMESEEIIIDEKNAAIINKAVEAHRRVCAVGTTTMRALETSVSSNKKISAFNGWT 285
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
N FI P + F + +++NFH PKSTL+M+++AF G + Y+ A+ Y+FYSYGD
Sbjct: 286 NKFIYPPHEFGVANSMITNFHTPKSTLIMMIAAFAGRDFVMHAYEEAVKEKYKFYSYGDA 345
Query: 354 SLLF 357
L+
Sbjct: 346 MLIL 349
>gi|15640758|ref|NP_230388.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae O1 biovar El Tor str. N16961]
gi|121591366|ref|ZP_01678651.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae 2740-80]
gi|153818849|ref|ZP_01971516.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae NCTC 8457]
gi|153822721|ref|ZP_01975388.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae B33]
gi|227080918|ref|YP_002809469.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae M66-2]
gi|229505646|ref|ZP_04395156.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae BX 330286]
gi|229510682|ref|ZP_04400161.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae B33]
gi|229517804|ref|ZP_04407248.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae RC9]
gi|229608664|ref|YP_002879312.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae MJ-1236]
gi|254847876|ref|ZP_05237226.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae MO10]
gi|255744547|ref|ZP_05418498.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholera CIRS 101]
gi|262161319|ref|ZP_06030430.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae INDRE 91/1]
gi|298499127|ref|ZP_07008934.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae MAK 757]
gi|21263923|sp|Q9KTZ1|QUEA_VIBCH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|254764289|sp|C3LSZ2|QUEA_VIBCM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|9655184|gb|AAF93904.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae O1 biovar El Tor str. N16961]
gi|121546782|gb|EAX56952.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae 2740-80]
gi|126510631|gb|EAZ73225.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae NCTC 8457]
gi|126519752|gb|EAZ76975.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae B33]
gi|227008806|gb|ACP05018.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae M66-2]
gi|229344519|gb|EEO09493.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae RC9]
gi|229350647|gb|EEO15588.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae B33]
gi|229357869|gb|EEO22786.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae BX 330286]
gi|229371319|gb|ACQ61742.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae MJ-1236]
gi|254843581|gb|EET21995.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae MO10]
gi|255737578|gb|EET92972.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholera CIRS 101]
gi|262029069|gb|EEY47722.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae INDRE 91/1]
gi|297543460|gb|EFH79510.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae MAK 757]
Length = 352
Score = 239 bits (609), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 142/366 (38%), Positives = 209/366 (57%), Gaps = 31/366 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N S LV D D+ + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPKAERTASRLLQLDGN-SGQLV--DGTFKDVLELVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + ++ + R SK K G L+
Sbjct: 58 FNNTRVIPARMFGRKASG-----GKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGEN 112
Query: 121 DG-----QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
D Q+R +A ++ ++L ++ +G +PLPPYI RP +
Sbjct: 113 DEFHAVMQARHDALFEIRFTAETVVLDI----------LNQIGHMPLPPYI--DRPDEEA 160
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y + G+VAAPTAGLHF LL ++ + G+++ +VTLHVGAGTF PV+VE+
Sbjct: 161 DKERYQTVYNQKPGAVAAPTAGLHFDQALLEQIQAKGVELAYVTLHVGAGTFQPVRVENI 220
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-----INPWS 290
DH MH+E + A+ + K+RGGR+V+VGTTS+R LE+A +D + + P+
Sbjct: 221 HDHHMHAEYVEVPQEVVDAITATKARGGRVVAVGTTSVRSLESA-AQDALQKGTELKPFF 279
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G T IFI PGY+++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ YRF+SY
Sbjct: 280 GDTEIFIFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYEHTMAAYEHAVKEQYRFFSY 339
Query: 351 GDTSLL 356
GD +
Sbjct: 340 GDAMFI 345
>gi|118595266|ref|ZP_01552613.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Methylophilales bacterium HTCC2181]
gi|118441044|gb|EAV47671.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Methylophilales bacterium HTCC2181]
Length = 348
Score = 239 bits (609), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 142/359 (39%), Positives = 203/359 (56%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EF++ LP IA P+ R +RL+V +P ISD + L ND ++
Sbjct: 1 MRIEEFNYILPDELIAQSPLKNRGDSRLLVANP---VGKKISDSYFKNFTVLLKKNDLVI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A++ G + ++ + ++ ++ + R SK I DI +
Sbjct: 58 FNDTRVIKARIFGTKTTG-----GKVELLIERILNNHTATALIRTSKRI---DIGLTIAI 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D + ++ VI + N L + G + G +PLPPYI R + D + Y
Sbjct: 110 DCINSIK--VISRNNN---LFEIQLLGGSFYDLLEKHGHVPLPPYIERND--EDEDEIRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +AK G+VAAPTAGLHF+ L + GI + F+TLHVG+GTF P+K ED + H M
Sbjct: 163 QTVFAKEAGAVAAPTAGLHFSEQDLRGMDKKGIAMAFITLHVGSGTFQPIKTEDINQHTM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H EI I + + K++ GRIV++GTT LR LE+A ED II T+IFI PG
Sbjct: 223 HQEIYNIPKSIIKKIAETKAKNGRIVAIGTTVLRALESAYEED-IIKTGYNETDIFIKPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
+ F+ VD L +NFHLPKSTLLMLVSAF G + K +Y+HA+ + YRF+SYGD + QK
Sbjct: 282 FNFKVVDALFTNFHLPKSTLLMLVSAFAGSKFIKAIYRHAVDNKYRFFSYGDAMFIEQK 340
>gi|89094745|ref|ZP_01167680.1| putative S-adenosylmethionine:tRNAribosyltransferase-isomerase
[Oceanospirillum sp. MED92]
gi|89080999|gb|EAR60236.1| putative S-adenosylmethionine:tRNAribosyltransferase-isomerase
[Oceanospirillum sp. MED92]
Length = 350
Score = 239 bits (609), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 140/359 (38%), Positives = 205/359 (57%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+F FDLP IA P+ R ++RL+ V V+ +D+ + D ++
Sbjct: 1 MQVKDFHFDLPEELIASFPLEERSASRLLSVDGESG---VLKHGCFTDVLDLIQPGDLMI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + ++ + + + R S+ K+G L
Sbjct: 58 FNDTRVIPARLFGQK-----ESGGKVEVLVERMLDEKRALAHVRSSRSPKEGSKLLL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ +EA ++ + L F I G L + G +PLPPY+ KR + D Y
Sbjct: 110 --EGGIEAEMVGRHEN-LFELRFHIEG-NLVDALETHGHMPLPPYM--KREDQSSDRERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y K G+VAAPTAGLHF LL++L G++ FVTLHVGAGTF PVKV++ D+H+M
Sbjct: 164 QTVYNKKPGAVAAPTAGLHFDDALLAKLDEKGVQRAFVTLHVGAGTFQPVKVDNIDEHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + + ++ G R+++VGTTS+R LE+A ++ G I P+ G ++IFI PG
Sbjct: 224 HSEYIEVSEEVCELIKQTRANGKRVIAVGTTSVRSLESA-SQKGEIAPFFGDSDIFIFPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
Y F++VD +++NFHLP+STLLMLVSAF G E Y+ A+ YRF+SYGD L +K
Sbjct: 283 YEFKSVDAMITNFHLPESTLLMLVSAFSGYENMMTAYREAVEQKYRFFSYGDAMYLTRK 341
>gi|156935046|ref|YP_001438962.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cronobacter
sakazakii ATCC BAA-894]
gi|166216721|sp|A7MEL5|QUEA_ENTS8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|156533300|gb|ABU78126.1| hypothetical protein ESA_02897 [Cronobacter sakazakii ATCC BAA-894]
Length = 356
Score = 239 bits (609), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 145/361 (40%), Positives = 206/361 (57%), Gaps = 29/361 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M + +F F+LP S IA P R + RL+ +L P H +DL LN D +
Sbjct: 1 MRLTDFSFELPESLIAHYPQAQRSACRLL----SLDGPTGDLTHGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + + R SK K G L
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEVLVERMLDDHRVLAHIRASKAPKPGAELLLGD 111
Query: 120 QDG-----QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
+ +R +A ++N +L ++ +G +PLPPYI +RP +
Sbjct: 112 DESVNATMTARHDALFEVQFNDARPVLDI----------LNSIGHMPLPPYI--ERPDEE 159
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D YQT Y++ G+VAAPTAGLHF LL RL + GI++ FVTLHVGAGTF PV+VE
Sbjct: 160 ADRELYQTVYSQKPGAVAAPTAGLHFDEPLLERLRAKGIEMAFVTLHVGAGTFQPVRVES 219
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGF 292
+DH+MHSE + A+ + K+RG ++V+VGTTS+R LE+A +D +I P+ G
Sbjct: 220 IEDHVMHSEYAEVPQEVVDAVLAAKARGNKVVAVGTTSVRSLESAAQAAQDALIAPFFGD 279
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T IFI PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD
Sbjct: 280 TQIFIYPGYQYKVIDALVTNFHLPESTLIMLVSAFAGYKHTMNAYREAVKAEYRFFSYGD 339
Query: 353 T 353
Sbjct: 340 A 340
>gi|254428367|ref|ZP_05042074.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Alcanivorax
sp. DG881]
gi|196194536|gb|EDX89495.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Alcanivorax
sp. DG881]
Length = 363
Score = 238 bits (608), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 145/357 (40%), Positives = 199/357 (55%), Gaps = 22/357 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
V +FDF+LP IA P R ARL+ + + + DL + ++ D ++FN
Sbjct: 8 VDDFDFELPDGLIARHPPAERRDARLLALTRD-----ALLHQQFPDLLSHVHPGDLLIFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+VI A+L G + ++ + V + + R SK K G L F
Sbjct: 63 DTRVIPARLFGQK-----ESGGKVEVLIERVVDDHEALAHVRASKSPKPGSWLEF----- 112
Query: 123 QSRLEATVIDKWNTGEILLVFSISGI---ELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ A V + + +L FS+ G L + +G +PLPPYI RP + D
Sbjct: 113 DEGIRAQVTGRRDA-LFILQFSLPGQGCDTLLTALEKIGHVPLPPYI--DRPDEDGDMER 169
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ G+VAAPTAGLHF +L+ L G+ + FVTLHVGAGTF PV+V+ +DH
Sbjct: 170 YQTVYAREPGAVAAPTAGLHFDDAMLAALEQHGVDIGFVTLHVGAGTFQPVRVDKVEDHH 229
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE I + + +RGGR+V+VGTT+LR LE A ++ G + G T+IFI P
Sbjct: 230 MHSERYQIPDSLVEQVAQAHARGGRVVAVGTTALRALE-AASQSGGLQTGQGETDIFIYP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GYRFR VD L++NFHLPKSTLLML+SAF G + YQ AI YRF+SYGD +
Sbjct: 289 GYRFRLVDALVTNFHLPKSTLLMLISAFAGRDRVMNAYQAAIESQYRFFSYGDAMFI 345
>gi|51102892|gb|AAT96042.1| QueA [Pseudomonas viridiflava]
Length = 354
Score = 238 bits (608), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 148/362 (40%), Positives = 203/362 (56%), Gaps = 32/362 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S+RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTLD---GVSGALAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDIL-HFFS 119
FNNT+VI A+L G +K L + V +V+ +L H S
Sbjct: 58 FNNTRVIPARLFG---------QKASGGKLEILVE-----------RVLDSHRVLAHVRS 97
Query: 120 QDGQSRLEATVIDKWNTGEILL----VFSIS-GIELERQISLVGTIPLPPYIARKRPIDA 174
+ +ID E++ +F + E+ + VG +PLPPYI RP +
Sbjct: 98 SKSPKPGSSILIDGGGEAEMVARHDALFELRFAEEVLPLLDRVGHMPLPPYI--DRPDEG 155
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D YQT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF PV+VE
Sbjct: 156 ADRERYQTVYAERAGAVAAPTAGLHFDQPLLEAIAAKGVETTFVTLHVGAGTFQPVRVEQ 215
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
+DH MH+E + A+ + ++RGGR+++VGTTS+R LE+A DG++ P+SG T+
Sbjct: 216 IEDHHMHTEWLEVGQDVVDAVAACRARGGRVIAVGTTSVRSLESA-ARDGVLKPFSGDTD 274
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PG F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+SYGD
Sbjct: 275 IFIYPGRPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFSYGDAM 334
Query: 355 LL 356
+
Sbjct: 335 FI 336
>gi|326566011|gb|EGE16171.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Moraxella
catarrhalis 12P80B1]
Length = 363
Score = 238 bits (608), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 152/362 (41%), Positives = 208/362 (57%), Gaps = 22/362 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+++ ++D+ LP IA P+ R S+RL+ V N SC D +DLP L S D +V
Sbjct: 14 VLLSDYDYHLPDDLIARYPLNERTSSRLLHVSKN-SC----QDLRFTDLPNLLKSGDLLV 68
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSV--YARPSKVIKKGDILHFF 118
N+TKVI A+L+G + E I L ++ N + + R S+ K G L+
Sbjct: 69 LNDTKVIKARLHGQKQTG-GAVEVLIERILPDEINNNLYKALCHVRSSRSPKVGQTLNL- 126
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
++++ATVI + + IL S +L+ G +P+PPY RK D D
Sbjct: 127 ---ANNQMQATVIGRQDNLFILGFRSPILADLDN----YGQMPIPPYFERK--ADETDDE 177
Query: 179 DYQTTYAK--IQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT + SVAAPTA LHF LL++L G+++ FVTLHVG+GTF PVKV++
Sbjct: 178 RYQTVFHNPTKSASVAAPTASLHFDDALLTQLRKKGVQIAFVTLHVGSGTFTPVKVDNLA 237
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE--DGIINPWSGFTN 294
DH+MH+E + A TA +N+ KS GGRI++VGTT R LETA G + + G T
Sbjct: 238 DHVMHAEYAHLPASTATLINNTKSAGGRIIAVGTTVTRTLETAHRHRIHGELVEFLGDTQ 297
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI P Y F VD L++NFHLPKSTLLMLVSAF G + ++ Y HAI + YRF+SYGD
Sbjct: 298 IFIYPPYEFGVVDCLITNFHLPKSTLLMLVSAFAGTQTIQEAYNHAIKNKYRFFSYGDAM 357
Query: 355 LL 356
L
Sbjct: 358 FL 359
>gi|326572548|gb|EGE22537.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Moraxella
catarrhalis CO72]
Length = 375
Score = 238 bits (608), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 152/362 (41%), Positives = 208/362 (57%), Gaps = 22/362 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+++ ++D+ LP IA P+ R S+RL+ V N SC D +DLP L S D +V
Sbjct: 14 VLLSDYDYHLPDDLIARYPLNERTSSRLLHVSKN-SC----QDLRFTDLPNLLKSGDLLV 68
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSV--YARPSKVIKKGDILHFF 118
N+TKVI A+L+G + E I L ++ N + + R S+ K G L+
Sbjct: 69 LNDTKVIKARLHGQKQTG-GAVEVLIERILPDEINNNLYKALCHVRSSRSPKVGQTLNL- 126
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
++++ATVI + + IL S +L+ G +P+PPY RK D D
Sbjct: 127 ---ANNQMQATVIGRQDNLFILGFRSPILADLDN----YGQMPIPPYFERK--ADETDDE 177
Query: 179 DYQTTYAK--IQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT + SVAAPTA LHF LL++L G+++ FVTLHVG+GTF PVKV++
Sbjct: 178 RYQTVFHNPTKSASVAAPTASLHFDDALLTQLRKKGVQIAFVTLHVGSGTFTPVKVDNLA 237
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE--DGIINPWSGFTN 294
DH+MH+E + A TA +N+ KS GGRI++VGTT R LETA G + + G T
Sbjct: 238 DHVMHAEYAHLPASTATLINNTKSAGGRIIAVGTTVTRTLETAHRHRIHGELVEFLGDTQ 297
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI P Y F VD L++NFHLPKSTLLMLVSAF G + ++ Y HAI + YRF+SYGD
Sbjct: 298 IFIYPPYEFGVVDCLITNFHLPKSTLLMLVSAFAGTQTIQEAYNHAIKNKYRFFSYGDAM 357
Query: 355 LL 356
L
Sbjct: 358 FL 359
>gi|163782315|ref|ZP_02177313.1| queuosine biosynthesis protein [Hydrogenivirga sp. 128-5-R1-1]
gi|159882348|gb|EDP75854.1| queuosine biosynthesis protein [Hydrogenivirga sp. 128-5-R1-1]
Length = 334
Score = 238 bits (608), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 142/357 (39%), Positives = 200/357 (56%), Gaps = 23/357 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V+EFD++LP IA PV PR SARLMV+ I +LP L D +V
Sbjct: 1 MRVEEFDYELPEELIAKYPVVPRHSARLMVLDRGSQS---IKHDTFWNLPDHLEEGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L G + ++ L V P+ W K I+KG +
Sbjct: 58 FNNTKVIPARLYGRKPTG-----GKVEVVLTDYVKPDLWKALVG-GKKIRKGLSIEIAPD 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G V++ G+ L+ + G + + + G IP+PPY+ R+ R+Y Y
Sbjct: 112 FG-----IEVLEHIEDGKFLV--RLMGKDPLKLVDRYGHIPIPPYLRREEEDIDREY--Y 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +G+VA+PTA LHF+ LL +L GI FVTLHV GTF PVK + ++H++
Sbjct: 163 QTIFAEEEGAVASPTASLHFSEELLEKLERKGIGRTFVTLHVSYGTFKPVKTDSVEEHVV 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
E + T + +++ K RGGR+V+VGTT +R LET+ + G+T ++I PG
Sbjct: 223 EPEYIRVPEETVEKIHNTKERGGRVVAVGTTVVRALETSP-----FKSYEGWTELYIYPG 277
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+ VD L++NFHLP+S+LL LVSAF G E K Y+ A+S YRFYSYGD L+
Sbjct: 278 YEFKVVDALITNFHLPRSSLLFLVSAFGGKEFVLKAYREAVSKEYRFYSYGDGMLIL 334
>gi|270263540|ref|ZP_06191809.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Serratia
odorifera 4Rx13]
gi|270042424|gb|EFA15519.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Serratia
odorifera 4Rx13]
Length = 356
Score = 238 bits (608), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 149/363 (41%), Positives = 213/363 (58%), Gaps = 27/363 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLV-SDLPAFLNSNDAI 59
M V +F F+LP S IA P R RL+ L P H V +DL L + D +
Sbjct: 1 MRVADFSFELPESLIAHYPQPERSGCRLL----QLDGPSGALTHGVFTDLLDNLEAGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A++ G + +I + + + + R SK K G L
Sbjct: 57 VFNNTRVIPARMFGRKVSG-----GKIEVLVERVLDDHRVLAHVRASKAPKPGAEL--LL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARKRPIDAR 175
D +S + AT++ + +T +F + ER + + VG +PLPPYI RP +
Sbjct: 110 GDDES-VAATMVARHDT-----LFELR-FNDERDVFTILNAVGHMPLPPYI--DRPDEDA 160
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y++ G+VAAPTAGLHF LL+ L + GI++ FVTLHVGAGTF PV+VE
Sbjct: 161 DRELYQTVYSEKPGAVAAPTAGLHFDEPLLAALRAKGIEMAFVTLHVGAGTFQPVRVETI 220
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFT 293
++H+MH+E + A+ + K+RG R+V+VGTTS+R LE+A ++D +I P+ G T
Sbjct: 221 EEHVMHAEYAEVPQEVVDAVLACKARGKRVVAVGTTSVRSLESAANASKDALIAPFFGDT 280
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PGY ++ +D L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD
Sbjct: 281 SIFIFPGYHYQVIDALVTNFHLPESTLIMLVSAFAGYKNTMHAYQQAVAEQYRFFSYGDA 340
Query: 354 SLL 356
+
Sbjct: 341 MFI 343
>gi|229846333|ref|ZP_04466441.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae 7P49H1]
gi|229810426|gb|EEP46144.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae 7P49H1]
Length = 363
Score = 238 bits (608), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 141/364 (38%), Positives = 207/364 (56%), Gaps = 19/364 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R S RL+ ++ I SD+ ++ D ++
Sbjct: 1 MRVSDFNFDLPDELIARYPKTDRVSCRLLQLNGENG---EIFHRTFSDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + + R SK K+G L F +
Sbjct: 58 FNNTRVIPARMFGRKASG-----GKIEVLVERMLDEHLFLAHIRSSKSPKEGAEL-FLGE 111
Query: 121 D--GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
D G++ V+ + + S L + +G +PLPPYI RP + D
Sbjct: 112 DKLGENNGIKAVMKARHGALFEVELSDKSTALLDVLQAIGHMPLPPYI--DRPDEEADQE 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y+K+ G+VAAPTAGLHF NLL +L + G+ FVTLHVGAGTF PV+VE+ +DH
Sbjct: 170 CYQTVYSKVPGAVAAPTAGLHFDENLLEKLQAKGVNFEFVTLHVGAGTFQPVRVENIEDH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTED----GIINPWSGF 292
+MH+E + A+ + K G R+++VGTTS+R +E+A + E+ +I P+
Sbjct: 230 VMHAEYVEVSQEVCNAIIATKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSD 289
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD
Sbjct: 290 TSIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKQAVQEKYRFFSYGD 349
Query: 353 TSLL 356
+
Sbjct: 350 AMFI 353
>gi|296113505|ref|YP_003627443.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Moraxella
catarrhalis RH4]
gi|295921199|gb|ADG61550.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Moraxella
catarrhalis RH4]
gi|326559375|gb|EGE09800.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Moraxella
catarrhalis 46P47B1]
gi|326568088|gb|EGE18172.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Moraxella
catarrhalis BC7]
gi|326572408|gb|EGE22400.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Moraxella
catarrhalis BC8]
Length = 357
Score = 238 bits (607), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 152/362 (41%), Positives = 208/362 (57%), Gaps = 22/362 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+++ ++D+ LP IA P+ R S+RL+ V N SC D +DLP L S D +V
Sbjct: 8 VLLSDYDYHLPDDLIARYPLNERTSSRLLHVSKN-SC----QDLRFTDLPNLLKSGDLLV 62
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSV--YARPSKVIKKGDILHFF 118
N+TKVI A+L+G + E I L ++ N + + R S+ K G L+
Sbjct: 63 LNDTKVIKARLHGQKQTG-GAVEVLIERILPDEINNNLYKALCHVRSSRSPKVGQTLNL- 120
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
++++ATVI + + IL S +L+ G +P+PPY RK D D
Sbjct: 121 ---ANNQMQATVIGRQDNLFILGFRSPILADLDN----YGQMPIPPYFERK--ADETDDE 171
Query: 179 DYQTTYAK--IQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT + SVAAPTA LHF LL++L G+++ FVTLHVG+GTF PVKV++
Sbjct: 172 RYQTVFHNPTKSASVAAPTASLHFDDALLTQLRKKGVQIAFVTLHVGSGTFTPVKVDNLA 231
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE--DGIINPWSGFTN 294
DH+MH+E + A TA +N+ KS GGRI++VGTT R LETA G + + G T
Sbjct: 232 DHVMHAEYAHLPASTATLINNTKSAGGRIIAVGTTVTRTLETAHRHRIHGELVEFLGDTQ 291
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI P Y F VD L++NFHLPKSTLLMLVSAF G + ++ Y HAI + YRF+SYGD
Sbjct: 292 IFIYPPYEFGVVDCLITNFHLPKSTLLMLVSAFAGTQTIQEAYNHAIKNKYRFFSYGDAM 351
Query: 355 LL 356
L
Sbjct: 352 FL 353
>gi|326559774|gb|EGE10184.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Moraxella
catarrhalis 7169]
gi|326565038|gb|EGE15238.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Moraxella
catarrhalis 103P14B1]
gi|326568506|gb|EGE18578.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Moraxella
catarrhalis BC1]
gi|326574145|gb|EGE24093.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Moraxella
catarrhalis 101P30B1]
Length = 357
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 152/362 (41%), Positives = 208/362 (57%), Gaps = 22/362 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+++ ++D+ LP IA P+ R S+RL+ V N SC D +DLP L S D +V
Sbjct: 8 VLLSDYDYHLPDDLIARYPLNERTSSRLLHVSKN-SC----QDLRFTDLPNLLKSGDLLV 62
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSV--YARPSKVIKKGDILHFF 118
N+TKVI A+L+G + E I L ++ N + + R S+ K G L+
Sbjct: 63 LNDTKVIKARLHGQKQTG-GAVEVLIERILPDEINNNLYKALCHVRSSRSPKVGQTLNL- 120
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
++++ATVI + + IL S +L+ G +P+PPY RK D D
Sbjct: 121 ---ANNQMQATVIGRQDNLFILGFRSPILADLDN----YGQMPIPPYFERK--ADETDDE 171
Query: 179 DYQTTYAK--IQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT + SVAAPTA LHF LL++L G+++ FVTLHVG+GTF PVKV++
Sbjct: 172 RYQTVFHNPTKSASVAAPTASLHFDDALLTQLRKKGVQIAFVTLHVGSGTFTPVKVDNLA 231
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE--DGIINPWSGFTN 294
DH+MH+E + A TA +N+ KS GGRI++VGTT R LETA G + + G T
Sbjct: 232 DHVMHAEYAHLPASTATLINNTKSAGGRIIAVGTTVTRTLETAHLHRIHGELVEFLGDTQ 291
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI P Y F VD L++NFHLPKSTLLMLVSAF G + ++ Y HAI + YRF+SYGD
Sbjct: 292 IFIYPPYEFGVVDCLITNFHLPKSTLLMLVSAFAGTQTIQEAYNHAIKNKYRFFSYGDAM 351
Query: 355 LL 356
L
Sbjct: 352 FL 353
>gi|261346393|ref|ZP_05974037.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Providencia
rustigianii DSM 4541]
gi|282565711|gb|EFB71246.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Providencia
rustigianii DSM 4541]
Length = 358
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 141/358 (39%), Positives = 207/358 (57%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R S RL+ + ++ + +D+ L D +V
Sbjct: 1 MRVSDFTFELPEELIAHYPQAERSSCRLLSLD---GATGQLTHGVFTDILEKLEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + + R SK K+G L +
Sbjct: 58 FNNTRVIPARLFGRKASG-----GKIEVLVERMLDEHRVLAHVRASKAPKEGAAL-LLGE 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D + AT++ + G + + ++ ++ +G +PLPPYI RP + D Y
Sbjct: 112 D--ESVNATMVARH--GALFELRFDDARDVLSILNQIGHMPLPPYI--DRPDEESDKELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL L GI++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSQRPGAVAAPTAGLHFDEPLLEALRQKGIEMAFVTLHVGAGTFQPVRVDSIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++D +I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLACKARGNRVIAVGTTSVRSLESAAKASQDALIAPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+++ VD L++NFHLP+STL+MLVSAF G + T + YQ A+ YRF+SYGD +
Sbjct: 286 PGYQYQVVDALITNFHLPESTLIMLVSAFAGYKNTMQAYQEAVEQKYRFFSYGDAMFI 343
>gi|258626957|ref|ZP_05721759.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase [Vibrio
mimicus VM603]
gi|258580781|gb|EEW05728.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase [Vibrio
mimicus VM603]
Length = 352
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 142/366 (38%), Positives = 209/366 (57%), Gaps = 31/366 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N S LV D D+ + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPKAERTASRLLQLDGN-SGQLV--DGTFKDVLELVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + ++ + R SK K G L+
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGEN 112
Query: 121 DG-----QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
D Q+R +A ++ ++L ++ +G +PLPPYIAR P +
Sbjct: 113 DEFHAVMQARHDALFEIRFTAETVVLDI----------LNQIGHMPLPPYIAR--PDEDA 160
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y + G+VAAPTAGLHF LL ++ + G+ + +VTLHVGAGTF PV+VE+
Sbjct: 161 DKERYQTVYNQKPGAVAAPTAGLHFDQALLEQIQAKGVDLAYVTLHVGAGTFQPVRVENI 220
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-----INPWS 290
DH MH+E + A+ + K+RGGR+++VGTTS+R LE+A +D + + P+
Sbjct: 221 HDHHMHAEYVEVPQEVVDAVAATKARGGRVIAVGTTSVRSLESA-AQDALKKGTELKPFF 279
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G T IFI PGY+++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ YRF+SY
Sbjct: 280 GDTEIFIFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYEHTMAAYEHAVQQQYRFFSY 339
Query: 351 GDTSLL 356
GD +
Sbjct: 340 GDAMFI 345
>gi|262190477|ref|ZP_06048728.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae CT 5369-93]
gi|262033649|gb|EEY52138.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae CT 5369-93]
Length = 352
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 142/366 (38%), Positives = 209/366 (57%), Gaps = 31/366 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N S LV D D+ + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPKAERTASRLLQLDGN-SGQLV--DGTFKDVLELVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + ++ + R SK K G L+
Sbjct: 58 FNNTRVIPARMFGRKASG-----GKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGEN 112
Query: 121 DG-----QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
D Q+R +A ++ ++L ++ +G +PLPPYI RP +
Sbjct: 113 DEFHAVMQARHDALFEIRFTAETVVLDI----------LNQIGHMPLPPYI--DRPDEEA 160
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y + G+VAAPTAGLHF LL ++ + G+++ +VTLHVGAGTF PV+VE+
Sbjct: 161 DKERYQTVYNQKPGAVAAPTAGLHFDQALLEQIQAKGVELAYVTLHVGAGTFQPVRVENI 220
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-----INPWS 290
DH MH+E + A+ + K+RGGR+V+VGTTS+R LE+A +D + + P+
Sbjct: 221 HDHHMHAEYVEVPQEVVDAIAATKARGGRVVAVGTTSVRSLESA-AQDALQKGTELKPFF 279
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G T IFI PGY+++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ YRF+SY
Sbjct: 280 GDTEIFIFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYEHTMAAYEHAVKEQYRFFSY 339
Query: 351 GDTSLL 356
GD +
Sbjct: 340 GDAMFI 345
>gi|256545114|ref|ZP_05472480.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Anaerococcus vaginalis ATCC 51170]
gi|256399155|gb|EEU12766.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Anaerococcus vaginalis ATCC 51170]
Length = 340
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 147/356 (41%), Positives = 197/356 (55%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++FD++LP IA P RD +RLMVV D D+ +LN D +V
Sbjct: 1 MRTEDFDYNLPEELIAQHPADKRDFSRLMVVDRKTGQR---EDKHFYDIIDYLNEGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L F H +E+EI L + + W V RP K +K G F
Sbjct: 58 MNDTRVIPARL----FGHREEKEEEIEVFLLENIEDDKWEVLVRPGKKMKIGTKCIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L VID G ++ F GI + + +G +PLPPYI K +D Y
Sbjct: 111 --SDELSLEVIDIKEDGNRVIEFFYDGI-FQEILDRLGNMPLPPYIKEK----LKDKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GSVAAPTAGLHFT LL ++ G+K+ ++TL+VG GTF PVKV+D +H M
Sbjct: 164 QTVYSKNPGSVAAPTAGLHFTKELLKKIEEKGVKLAYITLNVGLGTFRPVKVDDVKNHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I TA +N K RI+S GTT+ R LE+ ++G I SG+T+IFI PG
Sbjct: 224 HSEFYQISKETADLINETKKNNKRIISTGTTTTRTLESVYKKNGQIKEDSGWTDIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ F +D ++NFHLPKSTL+MLVSA E Y+ A+ YRF+S+GD L
Sbjct: 284 FEFNVIDCQITNFHLPKSTLIMLVSALASKEIILDAYKDAVDKKYRFFSFGDAMFL 339
>gi|323143762|ref|ZP_08078430.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Succinatimonas hippei YIT 12066]
gi|322416475|gb|EFY07141.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Succinatimonas hippei YIT 12066]
Length = 359
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 142/360 (39%), Positives = 202/360 (56%), Gaps = 22/360 (6%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+F+FDLP IA P R R++ + N + D DL FL D +VFN+T
Sbjct: 7 DFNFDLPKELIANYPSAERTKCRMLCLDGNTG---ELCDRTFIDLKDFLRPGDLLVFNDT 63
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQS 124
KVI A+L G + + + + N+ + R SK K G L DG
Sbjct: 64 KVIPARLYGTK-----KTGGAVELLIERITGLNTALSHIRASKAPKAGSELFI---DGGY 115
Query: 125 RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTY 184
L T D G++ ++ + G L + VG IPLPPYI R+ +A D YQT Y
Sbjct: 116 VLNVTGRD----GDLFMIETADGSSLLDLLDKVGHIPLPPYIERED--EALDKDRYQTVY 169
Query: 185 AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEI 244
+K+ G+VAAPTAGLHF + + L S+G+ FVTLHVGAGTF PV+ +D H MH E
Sbjct: 170 SKVPGAVAAPTAGLHFDNAQIEELKSLGVNTAFVTLHVGAGTFQPVREDDIVKHHMHKEF 229
Query: 245 GFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT---EDGI--INPWSGFTNIFITP 299
+ A A+ + + G R+++VGTT++R LE+A T E+G+ I P+ T+IFI P
Sbjct: 230 VQLPEEVANAVKATHAAGHRVIAVGTTAVRSLESAATYARENGLGEIAPFHNDTSIFIYP 289
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY+++ VD L++NFHLP+STL+MLV AF G + T Y HA+ Y+F+SYGD + ++
Sbjct: 290 GYQYQVVDCLITNFHLPESTLIMLVCAFAGYKNTMHAYHHAVKDKYKFFSYGDCMFITKR 349
>gi|121729720|ref|ZP_01682161.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae V52]
gi|147675363|ref|YP_001216225.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae O395]
gi|229513121|ref|ZP_04402587.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae TMA 21]
gi|229530130|ref|ZP_04419520.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae 12129(1)]
gi|254285458|ref|ZP_04960422.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae AM-19226]
gi|262168811|ref|ZP_06036506.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae RC27]
gi|172047703|sp|A5F3H1|QUEA_VIBC3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|121628537|gb|EAX61020.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae V52]
gi|146317246|gb|ABQ21785.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae O395]
gi|150424320|gb|EDN16257.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae AM-19226]
gi|227012563|gb|ACP08773.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae O395]
gi|229333904|gb|EEN99390.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae 12129(1)]
gi|229350014|gb|EEO14968.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae TMA 21]
gi|262022929|gb|EEY41635.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae RC27]
Length = 352
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 142/366 (38%), Positives = 209/366 (57%), Gaps = 31/366 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N S LV D D+ + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPKAERTASRLLQLDGN-SGQLV--DGTFKDVLELVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + ++ + R SK K G L+
Sbjct: 58 FNNTRVIPARMFGRKASG-----GKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGEN 112
Query: 121 DG-----QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
D Q+R +A ++ ++L ++ +G +PLPPYI RP +
Sbjct: 113 DEFHAVMQARHDALFEIRFTAETVVLDI----------LNQIGHMPLPPYI--DRPDEET 160
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y + G+VAAPTAGLHF LL ++ + G+++ +VTLHVGAGTF PV+VE+
Sbjct: 161 DKERYQTVYNQKPGAVAAPTAGLHFDQALLEQIQAKGVELAYVTLHVGAGTFQPVRVENI 220
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-----INPWS 290
DH MH+E + A+ + K+RGGR+V+VGTTS+R LE+A +D + + P+
Sbjct: 221 HDHHMHAEYVEVPQEVVDAIAATKARGGRVVAVGTTSVRSLESA-AQDALQKGTELKPFF 279
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G T IFI PGY+++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ YRF+SY
Sbjct: 280 GDTEIFIFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYEHTMAAYEHAVKEQYRFFSY 339
Query: 351 GDTSLL 356
GD +
Sbjct: 340 GDAMFI 345
>gi|329298298|ref|ZP_08255634.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Plautia
stali symbiont]
Length = 356
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 146/359 (40%), Positives = 208/359 (57%), Gaps = 25/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLV-SDLPAFLNSNDAI 59
M V +F F+LP S IA P R RL+ +L P +H V +D+ LN D +
Sbjct: 1 MRVADFAFELPESLIAHYPQAQRSGCRLL----SLDGPSGALNHGVFTDVLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A++ G + +I + + + R SK K G
Sbjct: 57 VFNNTRVIPARVYGRKASG-----GKIEMLVERMLDDKRVLAHVRASKAPKPG--AELLL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISL---VGTIPLPPYIARKRPIDARD 176
D +S ++AT++ + + +F I + + + VG +PLPPYI RP + D
Sbjct: 110 GDDES-VKATMVARHDA-----LFEIEFADDRAVLDILNSVGHMPLPPYI--DRPDEEAD 161
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT Y+ G+VAAPTAGLHF LL+ L + G+++ FVTLHVGA TF PV+VE+ +
Sbjct: 162 RELYQTVYSARPGAVAAPTAGLHFDEPLLAALKAKGVEMAFVTLHVGASTFQPVRVENIN 221
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTN 294
DHIMHSE + A+ + K+RG ++V+VGTTS+R LE+A +DG+I P+ T
Sbjct: 222 DHIMHSEYAEVPQDVVDAVQACKARGNKVVAVGTTSVRSLESAAQACQDGLIAPFFDDTQ 281
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFI PGY ++ +D L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD
Sbjct: 282 IFIYPGYHYQVIDALITNFHLPESTLIMLVSAFAGYQHTMAAYQSAVAEQYRFFSYGDA 340
>gi|153829413|ref|ZP_01982080.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae 623-39]
gi|148875133|gb|EDL73268.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae 623-39]
Length = 352
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 142/366 (38%), Positives = 209/366 (57%), Gaps = 31/366 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N S LV D D+ + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPKAERTASRLLQLDGN-SGQLV--DGTFKDVLELVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + ++ + R SK K G L+
Sbjct: 58 FNNTRVIPARMFGRKASG-----GKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGEN 112
Query: 121 DG-----QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
D Q+R +A ++ ++L ++ +G +PLPPYI RP +
Sbjct: 113 DEFHAVMQARHDALFEIRFTAETVVLDI----------LNQIGHMPLPPYI--DRPDEET 160
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y + G+VAAPTAGLHF LL ++ + G+++ +VTLHVGAGTF PV+VE+
Sbjct: 161 DKERYQTVYNQKPGAVAAPTAGLHFDQALLEQIQAKGVELAYVTLHVGAGTFQPVRVENI 220
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-----INPWS 290
DH MH+E + A+ + K+RGGR+V+VGTTS+R LE+A +D + + P+
Sbjct: 221 HDHHMHAEYVEVPQEVVDAIAATKARGGRVVAVGTTSVRSLESA-AQDALQKGSELKPFF 279
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G T IFI PGY+++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ YRF+SY
Sbjct: 280 GDTEIFIFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYEHTMAAYEHAVKEQYRFFSY 339
Query: 351 GDTSLL 356
GD +
Sbjct: 340 GDAMFI 345
>gi|91215705|ref|ZP_01252675.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Psychroflexus torquis ATCC 700755]
gi|91186171|gb|EAS72544.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Psychroflexus torquis ATCC 700755]
Length = 351
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 140/360 (38%), Positives = 206/360 (57%), Gaps = 16/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F++ LP + +A P RD A+LMV++ I + D+ + + D +V
Sbjct: 3 MKLSQFEYTLPENLLAQFPSEHRDEAKLMVINRKDGS---IEHKIFKDVINYFDEKDVMV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
FNNTKV A+L G + + +I L ++P + W V P++ I+ G+ L+F
Sbjct: 60 FNNTKVFPARLYGNK----EKTGAKIEVFLLRELNPETRLWDVLVDPARKIRIGNKLYFG 115
Query: 119 SQDGQSRLEATVIDKW-NTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
+ L A VID N G L ++ S + +++ +G PLP YI R + D
Sbjct: 116 EDES---LVAEVIDNTTNRGRTLRFLYDGSYQDFRAKLTELGQTPLPKYITRD--VVPED 170
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ +LL RL GI VTLH+G GTF PV+VED
Sbjct: 171 AERYQTIYAKEEGAVAAPTAGLHFSKHLLKRLEIKGIDFAEVTLHIGLGTFSPVEVEDLS 230
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE +D +N+ KS +I +VGTT +R +E+ + + +N ++G+TN F
Sbjct: 231 KHKMDSEQIKVDEKATSIINNAKSEKRKICAVGTTVMRTIESTVSSNRRLNEFTGWTNKF 290
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F+ + +++NFH+PKSTLLM+VSAF G E +K Y+ AI Y+FYSYGD L+
Sbjct: 291 IFPPYDFKIANCMITNFHMPKSTLLMMVSAFAGHELMEKAYKEAIEENYKFYSYGDAMLI 350
>gi|237730380|ref|ZP_04560861.1| probably S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Citrobacter sp. 30_2]
gi|226905919|gb|EEH91837.1| probably S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Citrobacter sp. 30_2]
Length = 356
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 147/363 (40%), Positives = 209/363 (57%), Gaps = 27/363 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P R S RL+ +L P H +DL LN D +
Sbjct: 1 MRVTDFTFELPESLIAHYPQAERSSCRLL----SLDGPTGALTHGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + R SK K G
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEVLVERMLDDKRILAHIRASKAPKPG--AELLL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARKRPIDAR 175
D +S ++AT++ + + +F + ER + + +G +PLPPYI RP +
Sbjct: 110 GDDES-IKATMVARHDA-----LFEVE-FNDERSVLDILNAIGHMPLPPYI--DRPDEDA 160
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y++ G+VAAPTAGLHF LL++L GI++ FVTLHVGAGTF PV+V+
Sbjct: 161 DRELYQTVYSEKPGAVAAPTAGLHFDDPLLAKLRDKGIEMAFVTLHVGAGTFQPVRVDTI 220
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFT 293
+DHIMHSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ G T
Sbjct: 221 EDHIMHSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFGDT 280
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFI PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y A+ YRF+SYGD
Sbjct: 281 QIFIYPGYKYQVIDALVTNFHLPESTLIMLVSAFAGYKNTMHAYHEAVKAEYRFFSYGDA 340
Query: 354 SLL 356
+
Sbjct: 341 MFI 343
>gi|332160717|ref|YP_004297294.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|318604592|emb|CBY26090.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
enterocolitica subsp. palearctica Y11]
gi|325664947|gb|ADZ41591.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|330862453|emb|CBX72610.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase [Yersinia
enterocolitica W22703]
Length = 362
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 149/360 (41%), Positives = 211/360 (58%), Gaps = 27/360 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P R RL+ +L P H + +DL L D +
Sbjct: 1 MRVADFSFELPESLIAHYPQPQRSGCRLL----SLDGPTGALTHGIFTDLLDKLVPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
+FNNT+VI A+L G + ++ + + + + + SK K G L
Sbjct: 57 IFNNTRVIPARLFGRKASG-----GKLEVLVERVLDDHRVLAHVKASKAPKPGTEL--LL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARKRPIDAR 175
D +S + AT++ + +T +F + + ER + VG +PLPPYI RP +
Sbjct: 110 GDDES-IHATMLARHDT-----LFELR-FDDERDVFTILDAVGHMPLPPYI--DRPDEDA 160
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y++ G+VAAPTAGLHF +L+ L GI++ FVTLHVGAGTF PV+VE
Sbjct: 161 DRELYQTVYSQRLGAVAAPTAGLHFDEPMLAALREKGIEMAFVTLHVGAGTFQPVRVETI 220
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFT 293
+DHIMHSE + A+ + K+RG R+V+VGTTS+R LE+A +++G+I P+ G T
Sbjct: 221 EDHIMHSEYAEVPQEVVDAVLACKARGNRVVAVGTTSVRSLESAAKASDNGLIAPFFGDT 280
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFI PGY ++ VD L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD
Sbjct: 281 KIFIYPGYHYQVVDALITNFHLPESTLIMLVSAFAGYKNTMNAYQQAVAEQYRFFSYGDA 340
>gi|222109585|ref|YP_002551849.1| s-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Acidovorax
ebreus TPSY]
gi|221729029|gb|ACM31849.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Acidovorax
ebreus TPSY]
Length = 366
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 141/367 (38%), Positives = 207/367 (56%), Gaps = 23/367 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LP IA P R +RL+ + P +D + +LP L D +VFN
Sbjct: 13 LSDFDFELPELLIAQHPAPQRSGSRLL---DGRTAP--PTDRIFRELPDLLQPGDLLVFN 67
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+V+ A++ G + ++ + ++ N + + SK G LH
Sbjct: 68 DTRVVKARVFGEKASG-----GKLELLIERVLTGNEVVAHMKVSKKPLPGATLHLAGGAA 122
Query: 123 QSRLEATVIDKWNTGE-ILLVFSISGIELERQISLV---GTIPLPPYIARKR-----PID 173
+AT++ ++ + L ++ G E L+ G +PLPPYI R++ P
Sbjct: 123 AGGFDATLLGRYPDADGPLFRLALRGPAGESPWELMERHGHLPLPPYIERQQAGGNDPHA 182
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT +A+ G+VAAPTA LHF +L+RL GI+ VTLHVGAGTF PVK E
Sbjct: 183 GEDSERYQTVFARAPGAVAAPTAALHFDDAVLARLAERGIERASVTLHVGAGTFQPVKTE 242
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
+ +H MHSE + T AL + RGGR+V+VGTT++R LE+ +G T
Sbjct: 243 NLAEHRMHSEWYEVPLATLAALERCRQRGGRVVAVGTTTVRTLESWAASGQA----AGDT 298
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFITPG++F+ VD+L++NFHLPKSTL+MLVSAF G E ++Y+HA++ YRF+SYGD
Sbjct: 299 SIFITPGFQFQVVDLLLTNFHLPKSTLMMLVSAFAGYEHIMQLYRHAVAQRYRFFSYGDC 358
Query: 354 SLLFQKR 360
LL + R
Sbjct: 359 MLLERPR 365
>gi|242240323|ref|YP_002988504.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Dickeya
dadantii Ech703]
gi|242132380|gb|ACS86682.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Dickeya
dadantii Ech703]
Length = 362
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 145/359 (40%), Positives = 209/359 (58%), Gaps = 25/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R + RL+ + ++ + +DL LN D +V
Sbjct: 3 MRVADFSFELPESLIARYPQAQRSACRLLSLEGTTGA---LTHGVFTDLLDTLNPGDLLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK K G L +
Sbjct: 60 FNNTRVIPARLFGRKASG-----GKLEVLVERMLDDKRVLAHVRASKAPKPGMEL-LLGE 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARKRPIDARD 176
D + AT++++ + +F I + ER I + +G +PLPPYI RP +A D
Sbjct: 114 D--ESVHATMLERHDA-----LFEIR-FDDERDILTILNDIGHMPLPPYI--DRPDEAAD 163
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT Y++ G+VAAPTAGLHF LL+ L G+++ FVTLHVGAGTF PV+VE +
Sbjct: 164 RELYQTVYSQRPGAVAAPTAGLHFDEPLLAALKEKGVQMAFVTLHVGAGTFQPVRVESIE 223
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTN 294
+H+MH+E + A+ + K+RG R+V+VGTTS+R LE+A + G + P+ G T+
Sbjct: 224 EHVMHAEYAEVPQEVLDAVLACKARGNRVVAVGTTSVRSLESAAQASPAGQLAPFFGDTS 283
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFI PGY +R VD L++NFHLP+STL+MLVSAF G T + Y+ A+ YRF+SYGD
Sbjct: 284 IFIYPGYHYRVVDALVTNFHLPESTLIMLVSAFAGYRHTMEAYRQAVVSEYRFFSYGDA 342
>gi|153802811|ref|ZP_01957397.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae MZO-3]
gi|124121636|gb|EAY40379.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae MZO-3]
Length = 352
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 142/366 (38%), Positives = 209/366 (57%), Gaps = 31/366 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N S LV D D+ + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPKAERTASRLLQLDGN-SGQLV--DGTFKDVLELVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + ++ + R SK K G L+
Sbjct: 58 FNNTRVIPARMFGRKASG-----GKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGEN 112
Query: 121 DG-----QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
D Q+R +A ++ ++L ++ +G +PLPPYI RP +
Sbjct: 113 DEFHAVMQARHDALFEIRFTAETVVLDI----------LNQIGHMPLPPYI--DRPDEET 160
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y + G+VAAPTAGLHF LL ++ + G+++ +VTLHVGAGTF PV+VE+
Sbjct: 161 DKERYQTVYNQKPGAVAAPTAGLHFDQALLEQIQAKGVELAYVTLHVGAGTFQPVRVENI 220
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-----INPWS 290
DH MH+E + A+ + K+RGGR+V+VGTTS+R LE+A +D + + P+
Sbjct: 221 HDHHMHAEYVEVPQEVVDAIAATKARGGRVVAVGTTSVRSLESA-AQDALQKGSELKPFF 279
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G T IFI PGY+++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ YRF+SY
Sbjct: 280 GDTKIFIFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYEHTMAAYEHAVKEQYRFFSY 339
Query: 351 GDTSLL 356
GD +
Sbjct: 340 GDAMFI 345
>gi|87121911|ref|ZP_01077796.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Marinomonas
sp. MED121]
gi|86162709|gb|EAQ63989.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Marinomonas
sp. MED121]
Length = 355
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 142/357 (39%), Positives = 210/357 (58%), Gaps = 26/357 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHL-VSDLPAFLNSNDAI 59
M V ++ FDLP S IA P+ R +RL+ +L P HL D+ + +N D +
Sbjct: 1 MRVSDYHFDLPDSLIATYPMPERTGSRLL----SLDGPSGDLSHLDFCDVLSLVNPGDLM 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVS----PNSWSVYARPSKVIKKGDIL 115
VFNNT+VI A++ G +KE L + V NS + + SK K G +
Sbjct: 57 VFNNTRVIQARMFG---------QKESGGKLEVLVERLLDENSVLAHVKCSKSPKPGSKI 107
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
+ G++ +A ++ + +T L F +++ + VG +PLPPYI +RP +
Sbjct: 108 SLGTDQGKT-YQAVMVKRHDT-LFELCFDDYVLDV---LEEVGHMPLPPYI--ERPDENS 160
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y + G+VAAPTAGLHF LL+ L G+ + FVTLHVGAGTF PV+VE
Sbjct: 161 DKERYQTVYNEKPGAVAAPTAGLHFDEALLNALKEKGVDIAFVTLHVGAGTFQPVRVETL 220
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
++H MH+E ++ + K++GGR+++VG+TS+R LE+A ++ G + G T+I
Sbjct: 221 EEHEMHAEYVEVEQSVVDKVTQTKAKGGRVIAVGSTSMRSLESA-SQSGQLEMMKGDTSI 279
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
FI PGY F+ VD +++NFHLP+STL+ML+SAF G ++ YQ AI + YRF+SYGD
Sbjct: 280 FIYPGYEFKTVDAMVTNFHLPESTLIMLISAFAGYQQVMNAYQSAIDNEYRFFSYGD 336
>gi|22124897|ref|NP_668320.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis KIM 10]
gi|45440588|ref|NP_992127.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Microtus str. 91001]
gi|149364962|ref|ZP_01886997.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis CA88-4125]
gi|162419575|ref|YP_001607728.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis Angola]
gi|165926608|ref|ZP_02222440.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Orientalis str. F1991016]
gi|165935850|ref|ZP_02224420.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Orientalis str. IP275]
gi|166010965|ref|ZP_02231863.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Antiqua str. E1979001]
gi|166212906|ref|ZP_02238941.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Antiqua str. B42003004]
gi|167398790|ref|ZP_02304314.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Antiqua str. UG05-0454]
gi|167421697|ref|ZP_02313450.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Orientalis str. MG05-1020]
gi|167423843|ref|ZP_02315596.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Mediaevalis str. K1973002]
gi|218930222|ref|YP_002348097.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis CO92]
gi|229838797|ref|ZP_04458956.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Orientalis str. PEXU2]
gi|229896049|ref|ZP_04511219.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis Pestoides A]
gi|229899365|ref|ZP_04514508.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Orientalis str. India 195]
gi|229901288|ref|ZP_04516410.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis Nepal516]
gi|294504920|ref|YP_003568982.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis Z176003]
gi|21263880|sp|Q8ZC32|QUEA_YERPE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|226713856|sp|A9R352|QUEA_YERPG RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|21957733|gb|AAM84571.1|AE013703_1 probably S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Yersinia pestis KIM 10]
gi|45435445|gb|AAS61004.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Microtus str. 91001]
gi|115348833|emb|CAL21787.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis CO92]
gi|149291375|gb|EDM41449.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis CA88-4125]
gi|162352390|gb|ABX86338.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis Angola]
gi|165915995|gb|EDR34602.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Orientalis str. IP275]
gi|165921536|gb|EDR38733.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Orientalis str. F1991016]
gi|165989965|gb|EDR42266.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Antiqua str. E1979001]
gi|166205693|gb|EDR50173.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Antiqua str. B42003004]
gi|166960616|gb|EDR56637.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Orientalis str. MG05-1020]
gi|167051294|gb|EDR62702.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Antiqua str. UG05-0454]
gi|167058013|gb|EDR67759.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Mediaevalis str. K1973002]
gi|229681217|gb|EEO77311.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis Nepal516]
gi|229687767|gb|EEO79840.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Orientalis str. India 195]
gi|229695163|gb|EEO85210.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Orientalis str. PEXU2]
gi|229700972|gb|EEO89001.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis Pestoides A]
gi|262362985|gb|ACY59706.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis D106004]
gi|262366906|gb|ACY63463.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis D182038]
gi|294355379|gb|ADE65720.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis Z176003]
gi|320016379|gb|ADV99950.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Medievalis str. Harbin 35]
Length = 356
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 149/363 (41%), Positives = 212/363 (58%), Gaps = 27/363 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP + IA P R RL+ +L P H + +DL L D +
Sbjct: 1 MRVADFSFELPEALIAHYPQPQRSGCRLL----SLDGPTGTLTHGIFTDLLDKLAPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + ++ + + + + + SK K G L
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKLEVLVERVLDDHRVLAHVKASKAPKPGAEL--LL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARKRPIDAR 175
D +S + AT++ + +T +F + + ER + + VG +PLPPYI RP +
Sbjct: 110 GDDES-IRATMLARHDT-----LFELR-FDDERDVFTILNAVGHMPLPPYI--DRPDEDA 160
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y++ G+VAAPTAGLHF +L+ L GI++ FVTLHVGAGTF PV+V+
Sbjct: 161 DRELYQTVYSQRPGAVAAPTAGLHFDEPMLAALQEKGIEMAFVTLHVGAGTFQPVRVDTI 220
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFT 293
+DHIMHSE + A+ + K+RG R+V+VGTTS+R LE+A E+G+I P+ G T
Sbjct: 221 EDHIMHSEYAEVPQEVVDAVLACKARGKRVVAVGTTSVRSLESAAKAAENGLIAPFFGDT 280
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFI PGY ++ VD L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD
Sbjct: 281 RIFIYPGYHYQVVDALVTNFHLPESTLIMLVSAFAGYKNTMNAYQQAVAEQYRFFSYGDA 340
Query: 354 SLL 356
+
Sbjct: 341 MFI 343
>gi|238897332|ref|YP_002923009.1| S-adenosylmethionine:tRNA (m6t6A37) ribosyltransferase-isomerase
[Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum)]
gi|259551456|sp|C4K8M4|QUEA_HAMD5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|229465087|gb|ACQ66861.1| S-adenosylmethionine:tRNA (m6t6A37) ribosyltransferase-isomerase
[Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum)]
Length = 357
Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 144/362 (39%), Positives = 209/362 (57%), Gaps = 33/362 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP S +A P+ R RL+ ++ +++ + +DL L D +V
Sbjct: 1 MRLSDFSFELPESLVAQYPLEKRSDCRLLCLNGETG---TMTEGVFTDLLYQLEQGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A++ G + ++ + +SPN V+ + SK K G
Sbjct: 58 LNNTRVIPARVFGRK-----PSGGKLEILVERILSPNRVLVHLKSSKTPKLG-------- 104
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELE---RQISL-----VGTIPLPPYIARKRPI 172
+ + D N L+ S EL R+ +L +G IPLPPYI R
Sbjct: 105 -----AQFLLGDTANIPVTLMARHASLFELRFDVREDALMLLQSIGHIPLPPYIPRAD-- 157
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+ +D+ YQT Y + G+VAAPTAGLHF + LL+ L + GI+ FVTLHVGAGTF PVK
Sbjct: 158 EPKDHELYQTVYGQHLGAVAAPTAGLHFDNPLLNALKARGIETAFVTLHVGAGTFQPVKT 217
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWS 290
++ +H+MHSE + A+ + K+RG R+V+VGTTS+R LETA T++ + P+S
Sbjct: 218 DNITEHVMHSEYAEVSQEVVDAVLACKARGKRVVAVGTTSVRSLETAAQKTKNSFLTPFS 277
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G T+IFI PGY+++ VD L++NFHLPKSTL+MLV AF G + T + Y+ AI YRF+SY
Sbjct: 278 GETSIFIYPGYQYQIVDALITNFHLPKSTLIMLVCAFAGYQNTLRAYKKAIDEKYRFFSY 337
Query: 351 GD 352
GD
Sbjct: 338 GD 339
>gi|51595277|ref|YP_069468.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pseudotuberculosis IP 32953]
gi|186894294|ref|YP_001871406.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pseudotuberculosis PB1/+]
gi|81640225|sp|Q66DW6|QUEA_YERPS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|238691412|sp|B2K6S5|QUEA_YERPB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|51588559|emb|CAH20167.1| S-adenosylmethionine:tRNA (m6t6A37) ribosyltransferase-isomerase
[Yersinia pseudotuberculosis IP 32953]
gi|186697320|gb|ACC87949.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Yersinia
pseudotuberculosis PB1/+]
Length = 356
Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 149/363 (41%), Positives = 212/363 (58%), Gaps = 27/363 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP + IA P R RL+ +L P H + +DL L D +
Sbjct: 1 MRVADFSFELPEALIAHYPQPQRSGCRLL----SLDGPTGTLTHGIFTDLLDKLAPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + ++ + + + + + SK K G L
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKLEVLVERVLDDHRVLAHVKASKAPKPGAEL--LL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARKRPIDAR 175
D +S + AT++ + +T +F + + ER + + VG +PLPPYI RP +
Sbjct: 110 GDDES-IRATMLARHDT-----LFELC-FDDERDVFTILNAVGHMPLPPYI--DRPDEDA 160
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y++ G+VAAPTAGLHF +L+ L GI++ FVTLHVGAGTF PV+V+
Sbjct: 161 DRELYQTVYSQRPGAVAAPTAGLHFDEPMLAALQEKGIEMAFVTLHVGAGTFQPVRVDTI 220
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFT 293
+DHIMHSE + A+ + K+RG R+V+VGTTS+R LE+A E+G+I P+ G T
Sbjct: 221 EDHIMHSEYAEVPQEVVDAVLACKARGKRVVAVGTTSVRSLESAAKAAENGLIAPFFGDT 280
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFI PGY ++ VD L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD
Sbjct: 281 RIFIYPGYHYQVVDALVTNFHLPESTLIMLVSAFAGYKNTMNAYQQAVAEQYRFFSYGDA 340
Query: 354 SLL 356
+
Sbjct: 341 MFI 343
>gi|288574883|ref|ZP_06393240.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Dethiosulfovibrio peptidovorans DSM 11002]
gi|288570624|gb|EFC92181.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Dethiosulfovibrio peptidovorans DSM 11002]
Length = 344
Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 140/356 (39%), Positives = 202/356 (56%), Gaps = 20/356 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
V +D+ LP IA P PRDS+RLMV+ + + SDL +L S+D ++ N
Sbjct: 8 VSSYDYRLPKELIAQNPADPRDSSRLMVLSREDGS---LEHRVFSDLVDYLRSDDVLIRN 64
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+V+ A+L G + E E+ + R+S +W RP + +K G + DG
Sbjct: 65 DTRVMAARLKGKKV----EGEAEVEILVLSRLSGQTWEAMVRPGRRLKPG--ISVLLSDG 118
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD-YQ 181
+ +D + V G+++ + VGT+PLPPYI D+ + YQ
Sbjct: 119 TT----VKVDGIRPEGLRSVTFPEGVDVLSLLDKVGTVPLPPYIT-----DSNASPEAYQ 169
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A GS AAPTAGLHFT L+ R+ G+++ VTL VG GTF PVK ED H MH
Sbjct: 170 TVFANKVGSAAAPTAGLHFTPELIERIEKKGVEILDVTLQVGLGTFRPVKEEDLRHHPMH 229
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E I + TA +N K++G RIV+VGTTS+R LE+ + G++ T++FI PG+
Sbjct: 230 RERCQISSYTADRINKAKAQGRRIVAVGTTSVRTLES-MGDSGVLLSGERDTSLFIYPGF 288
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+ VD +++NFHLP+STLLMLVSAF G E T Y+ A+S YRF+S+GD ++
Sbjct: 289 EFKIVDAMITNFHLPQSTLLMLVSAFAGRERTLNAYKEAVSMEYRFFSFGDAMFIY 344
>gi|77460843|ref|YP_350350.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
fluorescens Pf0-1]
gi|91207396|sp|Q3K795|QUEA_PSEPF RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|77384846|gb|ABA76359.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
fluorescens Pf0-1]
Length = 349
Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 143/358 (39%), Positives = 201/358 (56%), Gaps = 30/358 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R +RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRGSRLLTLD---GVSGALAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKASG-----GKLEILVERVLDTHRVLAHVRSSKSPKPGSKI----- 107
Query: 121 DGQSRLEATVIDKWNTGEILL----VFSIS-GIELERQISLVGTIPLPPYIARKRPIDAR 175
+ID E+L +F + E+ + VG +PLPPYI RP +
Sbjct: 108 ---------LIDGGGEAEMLARHDALFELGFAEEVLPLLDRVGHMPLPPYI--DRPDEGS 156
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT YA+ G+VAAPTAGLHF L+ + + G++ FVTLHVGAGTF PV+VE
Sbjct: 157 DRERYQTVYAEKLGAVAAPTAGLHFDQTLMEAISAKGVETAFVTLHVGAGTFQPVRVEKI 216
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+DH MH+E + A+ + + RGGR+++VGTTS+R LE+A DG++ P+SG T+I
Sbjct: 217 EDHHMHTEWLEVGQDVVDAVAACRERGGRVIAVGTTSVRSLESA-ARDGVLKPFSGDTDI 275
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
FI PG F VD L++NFHLP+STLLMLVSAF G ET Y+ A+ + YRF+SYGD
Sbjct: 276 FIYPGRPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYKAAVDNGYRFFSYGDA 333
>gi|90021052|ref|YP_526879.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Saccharophagus degradans 2-40]
gi|122996339|sp|Q21KW2|QUEA_SACD2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|89950652|gb|ABD80667.1| S-adenosylmethionine [Saccharophagus degradans 2-40]
Length = 350
Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 141/359 (39%), Positives = 207/359 (57%), Gaps = 24/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAI 59
M ++F ++LP IA RP R +RL++ L P ++ DL + D +
Sbjct: 1 MRRQDFSYELPDELIARRPTETRTGSRLLM----LDGPSGELAHKQFPDLLNLVEEGDLM 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A++ G + ++ + +S + R SK K G I+
Sbjct: 57 VFNNTRVIPARVFGQKASG-----GKLEILAERILDAHSILAHVRSSKAPKPGSII--IL 109
Query: 120 QDGQSRLEATVIDKWNTGEIL--LVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
QDG T ++ E L L F L+ + +G +PLPPYI R+ D ++
Sbjct: 110 QDG------TEVEMVARHEALFELRFPADTTALD-VLENIGHMPLPPYIDREDEADDKER 162
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT Y +G+VAAPTAGLHF LL++L G++ FVTLHVGAGTF PV+V++ +
Sbjct: 163 --YQTVYGTQKGAVAAPTAGLHFDDVLLAKLKDKGVQQAFVTLHVGAGTFQPVRVDNIFE 220
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MHSE+ + + + K+ G R+++VGTTS+R LETA ++G++ P+ G T+IFI
Sbjct: 221 HHMHSEVMHVSQEVCDLIKATKAAGKRVIAVGTTSVRCLETA-AQNGVVEPYQGDTDIFI 279
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+++ VD L++NFHLP+STLLMLVSAF G + T YQ A++ YRF+SYGD +
Sbjct: 280 YPGYQYKVVDALVTNFHLPESTLLMLVSAFAGYKHTMNAYQQAVAQCYRFFSYGDAMFI 338
>gi|119478666|ref|ZP_01618556.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein ) [marine gamma proteobacterium
HTCC2143]
gi|119448392|gb|EAW29644.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein ) [marine gamma proteobacterium
HTCC2143]
Length = 349
Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 136/360 (37%), Positives = 195/360 (54%), Gaps = 11/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F+F LP IA P R +RL+V+ I +DL LN D +V
Sbjct: 1 MQLSDFNFQLPNHLIARYPTTNRTDSRLLVLDGQSGD---IQHQQFNDLSELLNDGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + I + + + R SK K G +LH
Sbjct: 58 FNDTRVIPARLWGKKST-----GGRIEILVERIIDSQRVLAHIRSSKSPKAGAVLHLHQN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
ATV + + E ++ +G +PLPPYI R + R+ Y
Sbjct: 113 ANSDETMATVTVVGRHDALFELMFDGEKEALSVLNSIGHMPLPPYIDRSDELADRER--Y 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y K G+VAAPTAGLHF+ + + G+ FVTLHVGAGTF PV+V + +H M
Sbjct: 171 QTVYGKKDGAVAAPTAGLHFSEQFIQHCQNKGVDTAFVTLHVGAGTFQPVRVSNITEHKM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + + + + RGGR+++VGTTS+R LETA + G + P+SG + IFI PG
Sbjct: 231 HAEWLEVSEQVCEKVRLTRQRGGRVIAVGTTSVRSLETA-SHSGELQPFSGDSEIFIYPG 289
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
Y+F++VD +++NFHLP+STL+MLVSAF E + Y+ A+ H YRF+SYGD + +R
Sbjct: 290 YQFKSVDAMLTNFHLPESTLIMLVSAFANREHVLEAYRTAVEHNYRFFSYGDAMFVLPQR 349
>gi|114320370|ref|YP_742053.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Alkalilimnicola ehrlichii MLHE-1]
gi|122311890|sp|Q0A9C4|QUEA_ALHEH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|114226764|gb|ABI56563.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Alkalilimnicola ehrlichii MLHE-1]
Length = 345
Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 148/359 (41%), Positives = 204/359 (56%), Gaps = 24/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP + IA P R +RL+ + + ++D DL L D +V
Sbjct: 1 MHVDDFSFDLPEALIAHHPPEQRRDSRLLCLDRDTGA---VADRRFPDLVDLLRPEDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G + + + + + R SKV G +L +
Sbjct: 58 LNDTRVIPARLFGHKPT-----GGRVEVLVERPLDRHRVLARLRASKVPAPGTVL---TL 109
Query: 121 DGQSRLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+G E T GE L F+ LE + G +PLPPYI +R A D
Sbjct: 110 EGGVAAEVT----GREGEFFTLRFTAEQTVLE-LLEHHGHMPLPPYI--RRADVAADRER 162
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A+ G+VAAPTAGLHF + LL+R+ + G+ +VTLHVG+GTF P++V D +H
Sbjct: 163 YQTVFARRPGAVAAPTAGLHFDNELLARIGARGVDTAWVTLHVGSGTFAPLRVSDPREHR 222
Query: 240 MHSEIGFIDAP--TAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
MHSE ++D P T A+ + RGGR+V+VGTT +R LETA +DG + P+ G T+IFI
Sbjct: 223 MHSE--WLDVPPATCAAIERARGRGGRVVAVGTTVVRALETA-AQDGAVQPYQGETDIFI 279
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PG+RF AVD L++NFHLP STLLMLVSAF G E Y+HA++ YRF+SYGD +
Sbjct: 280 YPGHRFHAVDALVTNFHLPGSTLLMLVSAFAGRERVLAAYRHAVAQRYRFFSYGDAMFI 338
>gi|153217324|ref|ZP_01951075.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae 1587]
gi|124113665|gb|EAY32485.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae 1587]
Length = 352
Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 141/361 (39%), Positives = 210/361 (58%), Gaps = 21/361 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N S LV D D+ + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPKAERTASRLLQLDGN-SGQLV--DGTFKDVLELVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + ++ + R SK K G L+
Sbjct: 58 FNNTRVIPARMFGRKASG-----GKLEVLVERMLDEHTILAHVRSSKPPKPGTELYL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G++ V+ + + F+ + L+ ++ +G +PLPPYI RP + D Y
Sbjct: 110 -GENNEFHAVMQARHDALFEIRFTAETVVLDI-LNQIGHMPLPPYI--DRPDEETDKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G+++ +VTLHVGAGTF PV+VE+ DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDQALLEQIQAKGVELAYVTLHVGAGTFQPVRVENIHDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-----INPWSGFTNI 295
H+E + A+ + K+RGGR+V+VGTTS+R LE+A +D + + P+ G T I
Sbjct: 226 HAEYVEVPQEVVDAIAATKARGGRVVAVGTTSVRSLESA-AQDALQKGSELKPFFGDTEI 284
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGY+++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ YRF+SYGD
Sbjct: 285 FIFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYEHTMAAYEHAVKEQYRFFSYGDAMF 344
Query: 356 L 356
+
Sbjct: 345 I 345
>gi|153947233|ref|YP_001402084.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pseudotuberculosis IP 31758]
gi|167016409|sp|A7FLF6|QUEA_YERP3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|152958728|gb|ABS46189.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pseudotuberculosis IP 31758]
Length = 356
Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 149/363 (41%), Positives = 210/363 (57%), Gaps = 27/363 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP + IA P R RL+ +L P H + +DL L D +
Sbjct: 1 MRVADFSFELPEALIAHYPQPQRSGCRLL----SLDGPTGTLTHGIFTDLLDKLAPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + ++ + + + + + SK K G L
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKLEVLVERVLDDHRVLAHVKASKAPKPGAEL-LLG 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARKRPIDAR 175
D R AT++ + +T +F + + ER + + VG +PLPPYI RP +
Sbjct: 111 DDENIR--ATMLARHDT-----LFELR-FDDERDVFTILNAVGHMPLPPYI--DRPDEDA 160
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y++ G+VAAPTAGLHF +L+ L GI++ FVTLHVGAGTF PV+V+
Sbjct: 161 DRELYQTVYSQRPGAVAAPTAGLHFDEPMLAALQEKGIEMAFVTLHVGAGTFQPVRVDTI 220
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFT 293
+DHIMHSE + A+ + K+RG R+V+VGTTS+R LE+A E+G+I P+ G T
Sbjct: 221 EDHIMHSEYAEVPQEVVDAVLACKARGKRVVAVGTTSVRSLESAAKAAENGLIAPFFGDT 280
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFI PGY ++ VD L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD
Sbjct: 281 RIFIYPGYHYQVVDALVTNFHLPESTLIMLVSAFAGYKNTMNAYQQAVAEQYRFFSYGDA 340
Query: 354 SLL 356
+
Sbjct: 341 MFI 343
>gi|319896582|ref|YP_004134775.1| s-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae F3031]
gi|301168885|emb|CBW28479.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae 10810]
gi|317432084|emb|CBY80434.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae F3031]
Length = 363
Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 141/364 (38%), Positives = 207/364 (56%), Gaps = 19/364 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R S RL+ ++ I SD+ ++ D ++
Sbjct: 1 MRVSDFNFDLPDELIARYPKTDRVSCRLLQLNGENG---EIFHRTFSDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + + R SK K+G L F +
Sbjct: 58 FNNTRVIPARMFGRKASG-----GKIEVLVERMLDEHRFLAHIRSSKSPKEGAEL-FLGE 111
Query: 121 D--GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
D G++ V+ ++ + S L + +G +PLPPYI RP + D
Sbjct: 112 DKLGENNGIKAVMKARHSSLFEVELSDKSTALLDVLQTIGHMPLPPYI--DRPDEEADKE 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y+K+ G+VAAPTAGLHF LL +L G+ FVTLHVGAGTF PV+VE+ +DH
Sbjct: 170 CYQTVYSKVPGAVAAPTAGLHFDDPLLEKLKKKGVNFEFVTLHVGAGTFQPVRVENIEDH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTED----GIINPWSGF 292
+MH+E + A+ + K G R+++VGTTS+R +E+A + E+ +I P+
Sbjct: 230 VMHAEYVEVSQEVCNAIIATKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSD 289
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + T Y+HA+ YRF+SYGD
Sbjct: 290 TSIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKHAVQEKYRFFSYGD 349
Query: 353 TSLL 356
+
Sbjct: 350 AMFI 353
>gi|108808678|ref|YP_652594.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis Antiqua]
gi|108811060|ref|YP_646827.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis Nepal516]
gi|145600086|ref|YP_001164162.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis Pestoides F]
gi|270489477|ref|ZP_06206551.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis KIM D27]
gi|108774708|gb|ABG17227.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis Nepal516]
gi|108780591|gb|ABG14649.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis Antiqua]
gi|145211782|gb|ABP41189.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis Pestoides F]
gi|270337981|gb|EFA48758.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis KIM D27]
Length = 361
Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 149/363 (41%), Positives = 212/363 (58%), Gaps = 27/363 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP + IA P R RL+ +L P H + +DL L D +
Sbjct: 6 MRVADFSFELPEALIAHYPQPQRSGCRLL----SLDGPTGTLTHGIFTDLLDKLAPGDLL 61
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + ++ + + + + + SK K G L
Sbjct: 62 VFNNTRVIPARLFGRKASG-----GKLEVLVERVLDDHRVLAHVKASKAPKPGAEL--LL 114
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARKRPIDAR 175
D +S + AT++ + +T +F + + ER + + VG +PLPPYI RP +
Sbjct: 115 GDDES-IRATMLARHDT-----LFELR-FDDERDVFTILNAVGHMPLPPYI--DRPDEDA 165
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y++ G+VAAPTAGLHF +L+ L GI++ FVTLHVGAGTF PV+V+
Sbjct: 166 DRELYQTVYSQRPGAVAAPTAGLHFDEPMLAALQEKGIEMAFVTLHVGAGTFQPVRVDTI 225
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFT 293
+DHIMHSE + A+ + K+RG R+V+VGTTS+R LE+A E+G+I P+ G T
Sbjct: 226 EDHIMHSEYAEVPQEVVDAVLACKARGKRVVAVGTTSVRSLESAAKAAENGLIAPFFGDT 285
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFI PGY ++ VD L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD
Sbjct: 286 RIFIYPGYHYQVVDALVTNFHLPESTLIMLVSAFAGYKNTMNAYQQAVAEQYRFFSYGDA 345
Query: 354 SLL 356
+
Sbjct: 346 MFI 348
>gi|293392578|ref|ZP_06636898.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Serratia
odorifera DSM 4582]
gi|291424980|gb|EFE98189.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Serratia
odorifera DSM 4582]
Length = 356
Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 147/365 (40%), Positives = 208/365 (56%), Gaps = 31/365 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLV-SDLPAFLNSNDAI 59
M V +F FDLP S IA P R RL+ L P H V +DL L + D +
Sbjct: 1 MRVADFSFDLPESLIARYPQPQRSGCRLL----QLDGPTGKLTHGVFTDLLDQLEAGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A++ G + +I + + + + R SK K G L
Sbjct: 57 VFNNTRVIPARIFGRKASG-----GKIEVLVERVLDDHRVLAHVRASKAPKPGAALLLGD 111
Query: 120 QDGQSRLEATVIDKWNT------GEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
D + AT++ + +T + VF+I ++ VG +PLPPYI RP +
Sbjct: 112 DDS---IPATMVARHDTLFELRFDDPRDVFTI--------LNAVGHMPLPPYI--DRPDE 158
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT Y++ G+VAAPTAGLHF LL+ L G+++ FVTLHVGAGTF PV+VE
Sbjct: 159 DADRELYQTVYSQKPGAVAAPTAGLHFDEPLLAALREKGVEMAFVTLHVGAGTFQPVRVE 218
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSG 291
++H+MH+E + A+ + K+RG R+V+VGTTS+R LE+A ++D I P+ G
Sbjct: 219 TIEEHVMHAEYAEVPQEVVDAVLACKARGKRVVAVGTTSVRSLESAAKASQDAPIAPFFG 278
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T IFI PGY ++ +D L++NFHLP+STL+MLVSAF G + T Y+ A++ YRF+SYG
Sbjct: 279 DTRIFIYPGYHYQVIDALITNFHLPESTLIMLVSAFAGYQNTMNAYRQAVAEQYRFFSYG 338
Query: 352 DTSLL 356
D +
Sbjct: 339 DAMFI 343
>gi|87309884|ref|ZP_01092018.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Blastopirellula marina DSM 3645]
gi|87287648|gb|EAQ79548.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Blastopirellula marina DSM 3645]
Length = 348
Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 139/356 (39%), Positives = 199/356 (55%), Gaps = 12/356 (3%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++++D+ LP IA P+ R ARL+VV I + DLP L D +V N
Sbjct: 4 IEQYDYRLPKELIAQEPLEKRADARLLVVDRKSGQ---IEHRYIRDLPEILQPTDHLVLN 60
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS-WSVYARPSKVIKKGDILHFFSQD 121
NTKV+ A+L G R R + L++ N W V A+ I G+++ +++
Sbjct: 61 NTKVVPARLVGRRTLTGGRWQG-----LYLESDINGHWLVLAKTRGKIAAGEMVTLENRE 115
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ + ++ G + S LE + VG +PLP YI R+ + D+ YQ
Sbjct: 116 TKEDISLRLVASLGVGMWAVEPESSESTLE-ILERVGRVPLPHYI-REGEMMPDDWKRYQ 173
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A+ G+VAAPTAGLHF++ LL +L + + V +VTLHVG GTF PV V+ D+H+MH
Sbjct: 174 TVFAEQPGAVAAPTAGLHFSTELLKKLTNNDLLVDYVTLHVGIGTFRPVSVDQLDEHVMH 233
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E G I + + K+ GGR ++VGTT R++ETA G + PW G T++FI P +
Sbjct: 234 KEWGEIREEAVERILETKAAGGRNIAVGTTVARVMETA-ARSGELQPWRGQTDLFIRPPF 292
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F AVD L++NFHLPKSTLL+LV F G E ++ Y AI YRFYSYGD L+
Sbjct: 293 EFHAVDALLTNFHLPKSTLLILVRTFGGEELMREAYAEAIREEYRFYSYGDAMLIL 348
>gi|229525386|ref|ZP_04414791.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae bv. albensis VL426]
gi|229338967|gb|EEO03984.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae bv. albensis VL426]
Length = 352
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 142/366 (38%), Positives = 209/366 (57%), Gaps = 31/366 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N S LV D D+ + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPKAERTASRLLQLDGN-SGQLV--DGTFKDVLELVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + ++ + R SK K G L+
Sbjct: 58 FNNTRVIPARMFGRKASG-----GKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGEN 112
Query: 121 DG-----QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
D Q+R +A ++ ++L ++ +G +PLPPYI RP +
Sbjct: 113 DEFHAVMQARHDALFEIRFTAETVVLDI----------LNQIGHMPLPPYI--DRPDEET 160
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y + G+VAAPTAGLHF LL ++ + G+++ +VTLHVGAGTF PV+VE+
Sbjct: 161 DKERYQTVYNQKPGAVAAPTAGLHFDQVLLEQIQAKGVELAYVTLHVGAGTFQPVRVENI 220
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-----INPWS 290
DH MH+E + A+ + K+RGGR+V+VGTTS+R LE+A +D + + P+
Sbjct: 221 HDHHMHAEYVEVPQEVVDAIAATKARGGRVVAVGTTSVRSLESA-AQDALQKGSELKPFF 279
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G T IFI PGY+++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ YRF+SY
Sbjct: 280 GDTEIFIFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYEHTMAAYEHAVKEQYRFFSY 339
Query: 351 GDTSLL 356
GD +
Sbjct: 340 GDAMFI 345
>gi|170025482|ref|YP_001721987.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pseudotuberculosis YPIII]
gi|238688412|sp|B1JIF0|QUEA_YERPY RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|169752016|gb|ACA69534.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Yersinia
pseudotuberculosis YPIII]
Length = 356
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 149/363 (41%), Positives = 210/363 (57%), Gaps = 27/363 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP + IA P R RL+ +L P H + +DL L D +
Sbjct: 1 MRVADFSFELPEALIAHYPQPQRSGCRLL----SLDGPTGTLTHGIFTDLLDKLAPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + ++ + + + + + SK K G L
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKLEVLVERVLDDHRVLAHVKASKAPKPGAEL-LLG 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARKRPIDAR 175
D R AT++ + +T +F + + ER + + VG +PLPPYI RP +
Sbjct: 111 DDENIR--ATMLARHDT-----LFELR-FDDERDVFTILNAVGHMPLPPYI--DRPDEDA 160
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y++ G+VAAPTAGLHF +L+ L GI++ FVTLHVGAGTF PV+V+
Sbjct: 161 DRELYQTVYSQRPGAVAAPTAGLHFDEPMLATLQEKGIEMAFVTLHVGAGTFQPVRVDTI 220
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFT 293
+DHIMHSE + A+ + K+RG R+V+VGTTS+R LE+A E+G+I P+ G T
Sbjct: 221 EDHIMHSEYAEVPQEVVDAVLACKARGKRVVAVGTTSVRSLESAAKAAENGLIAPFFGDT 280
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFI PGY ++ VD L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD
Sbjct: 281 RIFIYPGYHYQVVDALVTNFHLPESTLIMLVSAFAGYKNTMNAYQQAVAEQYRFFSYGDA 340
Query: 354 SLL 356
+
Sbjct: 341 MFI 343
>gi|229523437|ref|ZP_04412844.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae TM 11079-80]
gi|229339800|gb|EEO04815.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae TM 11079-80]
Length = 352
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 142/366 (38%), Positives = 209/366 (57%), Gaps = 31/366 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N S LV D D+ + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPKAERTASRLLQLDGN-SGQLV--DGTFKDVLELVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + ++ + R SK K G L+
Sbjct: 58 FNNTRVIPARMFGRKASG-----GKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGEN 112
Query: 121 DG-----QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
D Q+R +A ++ ++L ++ +G +PLPPYI RP +
Sbjct: 113 DEFHAVMQARHDALFEIRFTAETVVLDI----------LNQIGHMPLPPYI--DRPDEEA 160
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y + G+VAAPTAGLHF LL ++ + G+++ +VTLHVGAGTF PV+VE+
Sbjct: 161 DKERYQTVYNQKPGAVAAPTAGLHFDQVLLEQIQAKGVELAYVTLHVGAGTFQPVRVENI 220
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-----INPWS 290
DH MH+E + A+ + K+RGGR+V+VGTTS+R LE+A +D + + P+
Sbjct: 221 HDHHMHAEYVEVPQEVVDAVAATKARGGRVVAVGTTSVRSLESA-AQDALQKGTELKPFF 279
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G T IFI PGY+++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ YRF+SY
Sbjct: 280 GDTEIFIFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYEHTMAAYEHAVKEQYRFFSY 339
Query: 351 GDTSLL 356
GD +
Sbjct: 340 GDAMFI 345
>gi|254253195|ref|ZP_04946513.1| Queuosine biosynthesis protein [Burkholderia dolosa AUO158]
gi|124895804|gb|EAY69684.1| Queuosine biosynthesis protein [Burkholderia dolosa AUO158]
Length = 405
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 146/361 (40%), Positives = 205/361 (56%), Gaps = 21/361 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LPP IA + R ++RL+ V P + P + D ++LP+ + D +VFN
Sbjct: 54 LSDFDFNLPPELIAQTALPERTASRLLDVDPAVE-PARLVDRRFAELPSCIARGDLLVFN 112
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKV+ A+ G + +I + ++ R SK G L
Sbjct: 113 DTKVLKARFFGQKASG-----GKIEVLVERVTGTHTALAQIRASKSPGAGTTLRL----- 162
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ TV ++ L F ++L I G +PLPPYI + DA D YQT
Sbjct: 163 ADAFDVTVGERVEPF-FTLYFPQPCLDL---IERYGRLPLPPYI--EHDPDATDETRYQT 216
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA G+VAAPTAGLHF LL++L ++G++ +TLHVGAGTF PV+VE+ +H MHS
Sbjct: 217 VYASNPGAVAAPTAGLHFDEPLLAKLDAMGVERATLTLHVGAGTFQPVRVENIAEHKMHS 276
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGF---TNIFIT 298
E + + + ++RGG +++VGTTSLR LE A + D P + T+IFIT
Sbjct: 277 EWYDLPQSLVDKIAATRARGGNVIAVGTTSLRALEAAARSADEAGRPLAATQAETDIFIT 336
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGYRFR VD L++NFHLPKSTL+MLVSAF GIE + Y+HAI YRF+SYGD LL +
Sbjct: 337 PGYRFRVVDRLITNFHLPKSTLMMLVSAFAGIETIRAAYRHAIERRYRFFSYGDAMLLTR 396
Query: 359 K 359
+
Sbjct: 397 R 397
>gi|262402876|ref|ZP_06079437.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio sp.
RC586]
gi|262351658|gb|EEZ00791.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio sp.
RC586]
Length = 352
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 139/366 (37%), Positives = 208/366 (56%), Gaps = 31/366 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N ++D D+ F+ D +V
Sbjct: 1 MQVSDFHFELPDELIARYPKAERTASRLLQLDGNSGQ---LTDGTFKDVLGFVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + ++ + R SK K G L+
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGEN 112
Query: 121 DG-----QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
D Q+R +A ++ ++L ++ +G +PLPPYI RP +
Sbjct: 113 DEFHAVMQARHDALFEIRFTAETVVLDI----------LNQIGHMPLPPYI--DRPDEDA 160
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y + G+VAAPTAGLHF LL ++ G+++ +VTLHVGAGTF PV+V++
Sbjct: 161 DKERYQTVYNQKPGAVAAPTAGLHFDQALLEQIQVKGVELAYVTLHVGAGTFQPVRVDNI 220
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-----INPWS 290
DH MH+E + A+ + K+RGGR+V+VGTTS+R LE+A +D + + P+
Sbjct: 221 HDHHMHAEYVEVPQEVVDAVAATKARGGRVVAVGTTSVRSLESA-AQDALQKGTELKPFF 279
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G T IFI PGY+++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ YRF+SY
Sbjct: 280 GDTEIFIFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYEHTMAAYEHAVKEQYRFFSY 339
Query: 351 GDTSLL 356
GD +
Sbjct: 340 GDAMFI 345
>gi|283784223|ref|YP_003364088.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Citrobacter
rodentium ICC168]
gi|282947677|emb|CBG87232.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Citrobacter
rodentium ICC168]
Length = 356
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 148/359 (41%), Positives = 206/359 (57%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P R S RL+ +L P H +DL A LN D +
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSSCRLL----SLDGPTGALTHGTFTDLLAKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEVLVERMLDDKRILAHIRASKAPKPGAEL--LL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
D +S + AT+ + G + V + ++ +G +PLPPYI RP + D
Sbjct: 110 GDDES-INATMTARH--GALFEVEFNDARPVLDILNAIGHMPLPPYI--DRPDEDADREL 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y++ G+VAAPTAGLHF LL+ L GI++ FVTLHVGAGTF PV+V+ +DHI
Sbjct: 165 YQTVYSEKPGAVAAPTAGLHFDEPLLAALREKGIEMAFVTLHVGAGTFQPVRVDSIEDHI 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFI 297
MHSE + A+ + K+RG R+++VGTTS+R LE+A + +I P+ G T IFI
Sbjct: 225 MHSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKSDLIEPFFGDTQIFI 284
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 285 YPGYQYKVIDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEQKYRFFSYGDAMFI 343
>gi|312962926|ref|ZP_07777413.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
fluorescens WH6]
gi|311282953|gb|EFQ61547.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
fluorescens WH6]
Length = 349
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 153/366 (41%), Positives = 208/366 (56%), Gaps = 40/366 (10%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R ++RL+ + +S LV +DL L D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRASRLLTLD-GVSGALV--HRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDIL-HFFS 119
FNNT+VI A+L G +K L + V +V+ +L H S
Sbjct: 58 FNNTRVIPARLFG---------QKASGGKLEILVE-----------RVLDTHRVLAHVRS 97
Query: 120 QDGQSRLEATVIDKWNTGEILL----VFSISGIE-----LERQISLVGTIPLPPYIARKR 170
+ +ID E++ +F + E LER VG +PLPPYI R
Sbjct: 98 SKSPKPGSSILIDGGGEAEMVARHDALFELKFAEEVLPLLER----VGHMPLPPYI--DR 151
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
P + D YQT Y++ G+VAAPTAGLHF LL + + G++ +VTLHVGAGTF PV
Sbjct: 152 PDEDSDRERYQTVYSQRLGAVAAPTAGLHFDQPLLDAIAAKGVETAYVTLHVGAGTFQPV 211
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWS 290
+V++ +DH MHSE + A+ + K+RGGR+V+VGTTS+R LE+A DG++ P+S
Sbjct: 212 RVDNIEDHHMHSEWLEVSQDVVDAVQACKARGGRVVAVGTTSVRSLESA-ARDGVLKPFS 270
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G T+IFI PG F VD L++NFHLP+STLLMLVSAF G ET YQ AI + YRF+SY
Sbjct: 271 GDTDIFIFPGRPFHVVDCLVTNFHLPESTLLMLVSAFAGYPETMAAYQAAIDNGYRFFSY 330
Query: 351 GDTSLL 356
GD +
Sbjct: 331 GDAMFI 336
>gi|116051849|ref|YP_789308.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
aeruginosa UCBPP-PA14]
gi|122260996|sp|Q02RX8|QUEA_PSEAB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|115587070|gb|ABJ13085.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
aeruginosa UCBPP-PA14]
Length = 347
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 155/366 (42%), Positives = 209/366 (57%), Gaps = 40/366 (10%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAI 59
M V +F FDLP + IA P+ R ++RL+ L P ++ +DL +L D +
Sbjct: 1 MRVADFHFDLPEALIARHPLPERRASRLLA----LDGPTGTLAHRQFADLLDYLRPGDLM 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVS----PNSWSVYARPSKVIKKGDIL 115
VFNNT+VI A+L G +KE L + V + + R SK K G
Sbjct: 57 VFNNTRVIPARLFG---------QKESGGKLEVLVERVLDQHRVLAHIRASKAPKPG--T 105
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIE-----LERQISLVGTIPLPPYIARKR 170
+ G S A ++ + + +F ++ E LER VG +PLPPYI R
Sbjct: 106 RILVEGGGS---AEMLQRHDA-----LFELAFAEPVLPLLER----VGHMPLPPYI--DR 151
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
P DA D YQT YA+ G+VAAPTAGLHF LL + + G+ FVTLHVGAGTF PV
Sbjct: 152 PDDAADRERYQTVYAQRAGAVAAPTAGLHFDEALLEAIRAKGVDTAFVTLHVGAGTFQPV 211
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWS 290
+VE +DH+MH E + A+++ ++RGGR+V+VGTTS+R LE+A DG + P+S
Sbjct: 212 RVERIEDHVMHREWLEVGQDVVDAVSACRARGGRVVAVGTTSVRSLESA-ARDGELKPFS 270
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G T+IFI PG F VD L++NFHLP+STLLMLVSAF G ET Y A++ YRF+SY
Sbjct: 271 GDTDIFIYPGRPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAVAQGYRFFSY 330
Query: 351 GDTSLL 356
GD +
Sbjct: 331 GDAMFI 336
>gi|262172189|ref|ZP_06039867.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
mimicus MB-451]
gi|261893265|gb|EEY39251.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
mimicus MB-451]
Length = 352
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 141/366 (38%), Positives = 209/366 (57%), Gaps = 31/366 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N S LV D D+ + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPKAERTASRLLQLDGN-SGQLV--DGTFKDVLGLVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + ++ + R SK K G L+
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGEN 112
Query: 121 DG-----QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
D Q+R +A ++ ++L ++ +G +PLPPYI RP +
Sbjct: 113 DEFHAVMQARHDALFEIRFTAETVVLDI----------LNQIGHMPLPPYI--DRPDEDA 160
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y + G+VAAPTAGLHF LL ++ + G+++ +VTLHVGAGTF PV+VE+
Sbjct: 161 DKERYQTVYNQKPGAVAAPTAGLHFDQVLLEQIQAKGVELAYVTLHVGAGTFQPVRVENI 220
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-----INPWS 290
DH MH+E + A+ + K+RGGR+++VGTTS+R LE+A +D + + P+
Sbjct: 221 HDHHMHAEYVEVPQEVVDAVAATKARGGRVIAVGTTSVRSLESA-AQDALKKGTELKPFF 279
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G T IFI PGY+++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ YRF+SY
Sbjct: 280 GDTEIFIFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYEHTMAAYEHAVQQQYRFFSY 339
Query: 351 GDTSLL 356
GD +
Sbjct: 340 GDAMFI 345
>gi|226311457|ref|YP_002771351.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Brevibacillus brevis NBRC 100599]
gi|254764267|sp|C0ZAN8|QUEA_BREBN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|226094405|dbj|BAH42847.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Brevibacillus brevis NBRC 100599]
Length = 342
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 139/358 (38%), Positives = 199/358 (55%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RL+V+ I + L L + D +V
Sbjct: 1 MDVQQFDFDLPEHLIAQHPLEDRTSSRLLVLEKQTGN---IVHQQFTHLIDHLQAGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+++V+ A+L G + +I L + + W +P K +K G + F
Sbjct: 58 MNDSRVLPARLIGEK----TDTGAKIEILLLKSLGEDRWETLVKPGKRMKPGTEVVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L D TG ++ F GI E + +G++PLPPYI + D Y
Sbjct: 111 -GNGLLRCVCEDVTETGGRIVRFLYEGIFYE-ILDQLGSMPLPPYIHAQ----LEDSERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT L ++ + G+++ +VTLHVG GTF PV + ++H+M
Sbjct: 165 QTVYAKERGSAAAPTAGLHFTKPYLEQIAAKGVQLAYVTLHVGLGTFRPVSADSVEEHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E I T + +N K+ G R+++VGTTS R LET G + SG+T+IFI P
Sbjct: 225 HAEYYEIPEETVELVNQAKAEGRRVIAVGTTSCRTLETVGRANGGKLVATSGWTDIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY F +D L++NFHLPKSTL+MLVSA G E + Y+ A+ YRF+S+GD L+
Sbjct: 285 GYTFSILDGLLTNFHLPKSTLVMLVSALAGKENVMRAYKRAVEEEYRFFSFGDAMLIL 342
>gi|262274808|ref|ZP_06052619.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Grimontia
hollisae CIP 101886]
gi|262221371|gb|EEY72685.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Grimontia
hollisae CIP 101886]
Length = 351
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 141/358 (39%), Positives = 205/358 (57%), Gaps = 21/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP S IA P R ++RL+ ++ N +S +D+ + D +V
Sbjct: 1 MQVSDFHFDLPDSLIARYPQPDRTASRLLQLNGNTGE---LSHRQFTDILDLVEPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + R SK K G L
Sbjct: 58 FNNTRVIPARVYGRKASG-----GKIEVLVERMLDEKTILAHVRSSKSPKPGTQLFLGEN 112
Query: 121 DGQSRLEATVIDKWNT-GEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
D EA ++ + + EI V + +++ Q VG +PLPPYI RP + D
Sbjct: 113 D---EFEAEMVARHDALFEIRFVGEQAVLDILNQ---VGHMPLPPYI--DRPDEDSDKER 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y + G+VAAPTAGLHF N+L+ L G++ FVTLHVGAGTF PV+VE+ +DH+
Sbjct: 165 YQTVYNEKPGAVAAPTAGLHFDENILAALKEKGVQTAFVTLHVGAGTFQPVRVENINDHV 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNI 295
MH+E + A+ + K+RG R+++VGTTS+R LE+A E + P+ T I
Sbjct: 225 MHAEYAEVPQEVVDAVLATKARGNRVIAVGTTSVRSLESAAQHAKKEGTELQPFFDDTQI 284
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
FI PGY ++ VD L++NFHLP+STL+MLVS+F G + Y+ A+S+ YRF+SYGD
Sbjct: 285 FIYPGYEWQLVDALVTNFHLPESTLIMLVSSFAGYDHVMNAYKEAVSNEYRFFSYGDA 342
>gi|188534665|ref|YP_001908462.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Erwinia
tasmaniensis Et1/99]
gi|238689699|sp|B2VHQ4|QUEA_ERWT9 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|188029707|emb|CAO97586.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein QueA) [Erwinia tasmaniensis Et1/99]
Length = 355
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 144/361 (39%), Positives = 210/361 (58%), Gaps = 23/361 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ ++ + ++ + +DL LN D +V
Sbjct: 1 MRVADFTFELPESLIAHYPQAERSGCRLLSLNGSDGA---LTHGVFTDLLHKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARIFGRKAS-----GGKIEVLVERMLDDTRVLAHVRSSKAPKPGSDL--LLG 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISL---VGTIPLPPYIARKRPIDARDY 177
D +S ++AT++ + +T +F I + + + +G +PLPPYI RP + D
Sbjct: 111 DDES-VQATMLARHDT-----LFEIEFNDARPVLDILNSIGHMPLPPYI--DRPDEDADR 162
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT Y++ G+VAAPTAGLHF LL L GI+ FVTLHVGAGTF PV+V+ +D
Sbjct: 163 ELYQTVYSQKPGAVAAPTAGLHFDEPLLVALREKGIETAFVTLHVGAGTFQPVRVDTIED 222
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNI 295
HIMH+E + A+ + K+RG R+++VGTTS+R LE+A E+ +I P+ G T I
Sbjct: 223 HIMHAEYAEVPQDVVDAVLACKARGNRVIAVGTTSVRSLESAAQAAENTLIAPFFGDTKI 282
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGY ++ +D L++NFHLP+STL+MLVSAF G + T + YQ A++ YRF+SYGD
Sbjct: 283 FIYPGYHYQVIDALVTNFHLPESTLIMLVSAFAGYKHTMRAYQQAVAEQYRFFSYGDAMF 342
Query: 356 L 356
+
Sbjct: 343 I 343
>gi|239818027|ref|YP_002946937.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Variovorax
paradoxus S110]
gi|239804604|gb|ACS21671.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Variovorax
paradoxus S110]
Length = 348
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 148/360 (41%), Positives = 201/360 (55%), Gaps = 29/360 (8%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDFDLPP +A P R ++RL+ S P +D + LP+ L + D +VFN
Sbjct: 6 LSDFDFDLPPELVAQHPASERTASRLL--DGTGSTP---ADRIFKSLPSLLRAGDLLVFN 60
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFFSQ 120
+T+V+ A+L G EK L + V V A KV KK +
Sbjct: 61 DTRVVKARLFG---------EKPTGGKLELLVERVLQGHEVVAH-MKVSKKPPVGTTLQM 110
Query: 121 DGQSRLEATVIDKWNTGE-ILLVFSISGIELERQISLV---GTIPLPPYIARKRPIDARD 176
G R AT++ +W + L F E +L+ G +PLPPYI D D
Sbjct: 111 VGGFR--ATLLGRWPEEDGALFRFGFESGAGEDPYALMARCGHVPLPPYIMHSDSAD--D 166
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT +A++ G+VAAPTA LHF LL+ L + G++ VTLHVGAGTF PVK E+
Sbjct: 167 ERRYQTVFARVPGAVAAPTAALHFDEALLAELETRGVQRASVTLHVGAGTFQPVKTENIA 226
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+H MH+E + T +A+ K+RGGR+V+VGTT++R LE+ +G T IF
Sbjct: 227 EHTMHAERYEVPEATQRAIADCKARGGRVVAVGTTTVRTLESWAKS----GEAAGDTRIF 282
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPG+ F VD+L++NFHLPKSTL+MLVSAF G E +Y HAI+ YRF+SYGD LL
Sbjct: 283 ITPGFVFEHVDLLVTNFHLPKSTLMMLVSAFAGYEHVMALYAHAIAQHYRFFSYGDAMLL 342
>gi|238759998|ref|ZP_04621150.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
aldovae ATCC 35236]
gi|238701751|gb|EEP94316.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
aldovae ATCC 35236]
Length = 375
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 149/363 (41%), Positives = 214/363 (58%), Gaps = 27/363 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P R RL+ +L P H + +DL L D +
Sbjct: 20 MRVADFSFELPESLIAHYPQPQRSGCRLL----SLDGPTGTLTHGIFTDLLDKLLPGDLL 75
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + ++ + + + + + SK K G L
Sbjct: 76 VFNNTRVIPARLFGRKASG-----GKLEVLVERVLDDHRVLAHVKASKAPKPGAEL--LL 128
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARKRPIDAR 175
D +S ++AT++ + +T +F + + ER + + VG +PLPPYI RP +
Sbjct: 129 GDDES-IQATMLARHDT-----LFELR-FDDERDVFTILNAVGHMPLPPYI--DRPDEDA 179
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y++ G+VAAPTAGLHF +L+ L GI++ FVTLHVGAGTF PV+V+
Sbjct: 180 DRELYQTVYSQRPGAVAAPTAGLHFDEPMLAALREKGIEMAFVTLHVGAGTFQPVRVDTI 239
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFT 293
++HIMHSE + A+ + K+RG R+V+VGTTS+R LE+A T++G+I P+ G T
Sbjct: 240 EEHIMHSEYAEVPQDVVDAVLACKARGNRVVAVGTTSVRSLESAAKATDNGLIAPFFGDT 299
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFI PGY ++ VD L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD
Sbjct: 300 KIFIYPGYHYQVVDALITNFHLPESTLIMLVSAFAGYKNTMNAYQQAVAEQYRFFSYGDA 359
Query: 354 SLL 356
+
Sbjct: 360 MFI 362
>gi|261340999|ref|ZP_05968857.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterobacter cancerogenus ATCC 35316]
gi|288316863|gb|EFC55801.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterobacter cancerogenus ATCC 35316]
Length = 356
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 147/359 (40%), Positives = 207/359 (57%), Gaps = 27/359 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R S RL+ +L P H +DL LN D +
Sbjct: 1 MRVADFSFELPESLIAHYPMPERSSCRLL----SLDGPTGELTHGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEVLVERMLDDKRILAHIRASKAPKPGAEL-LLG 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARKRPIDAR 175
D ++ AT+ + + +F + ER + + +G +PLPPYI +RP +
Sbjct: 111 DDESTK--ATMTARHDA-----LFEVE-FNDERTVLDILNAIGHMPLPPYI--ERPDEES 160
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y++ G+VAAPTAGLHF LL +L + GI++ FVTLHVGAGTF PV+V+
Sbjct: 161 DRELYQTVYSQKPGAVAAPTAGLHFDEPLLEKLRAKGIEMAFVTLHVGAGTFQPVRVDSI 220
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFT 293
+DHIMHSE + A+ + K+RG +V+VGTTS+R LE+A + +I P+ G T
Sbjct: 221 EDHIMHSEYAEVPQEVVDAVLAAKARGSSVVAVGTTSVRSLESAAQAAKTDLIEPFFGDT 280
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
IFI PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD
Sbjct: 281 QIFIYPGYQYKVIDALVTNFHLPESTLIMLVSAFAGYQHTMTAYKSAVEQKYRFFSYGD 339
>gi|323499868|ref|ZP_08104827.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
sinaloensis DSM 21326]
gi|323315109|gb|EGA68161.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
sinaloensis DSM 21326]
Length = 350
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 145/371 (39%), Positives = 209/371 (56%), Gaps = 35/371 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N + D +D+ + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQPERTASRLLQMDGNTG---ELVDGTFTDVLDQVQPGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREK--EISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
FNNT+VI A++ G R+E ++ + + S + R SK K G +
Sbjct: 58 FNNTRVIPARMFG-------RKESGGKLEVLVERVLDEKSILAHVRCSKSPKPGSTIFIG 110
Query: 119 SQDGQS-----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
D S R +A K+N + +L + +G +PLPPYI RP +
Sbjct: 111 ENDEYSAEMVARHDALFELKFNAEQNVLAV----------LEEIGHMPLPPYI--DRPDE 158
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT Y + G+VAAPTAGLHF LL ++ + G + +VTLHVGAGTF PVKV+
Sbjct: 159 DSDKERYQTVYNEKPGAVAAPTAGLHFDEPLLEKIKAKGAEFAYVTLHVGAGTFQPVKVD 218
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-----INP 288
+ ++H MH+E + A+ + K+RGGRI++VGTTS+R LE+A +D I + P
Sbjct: 219 NINEHHMHAEYVEVPQEVVDAIQATKARGGRIIAVGTTSVRSLESA-AQDAIKKGTELVP 277
Query: 289 WSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
+ G T IFI PGY ++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ + YRF+
Sbjct: 278 FFGDTEIFIFPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYENTMNAYKHAVENKYRFF 337
Query: 349 SYGDTSLLFQK 359
SYGD+ + +K
Sbjct: 338 SYGDSMFIKKK 348
>gi|51103036|gb|AAT96182.1| QueA [Pseudomonas viridiflava]
Length = 354
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 148/362 (40%), Positives = 201/362 (55%), Gaps = 32/362 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP S IA P+ R S+RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFDLPDSLIARHPLAERRSSRLLTLD---GVSGALAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDIL-HFFS 119
FNNT+VI A+L G +K L + V +V+ +L H S
Sbjct: 58 FNNTRVIPARLFG---------QKASGGKLEILVE-----------RVLDSHRVLAHVRS 97
Query: 120 QDGQSRLEATVIDKWNTGEILL----VFSIS-GIELERQISLVGTIPLPPYIARKRPIDA 174
+ +ID E++ +F + E+ + VG +PLPPYI RP +
Sbjct: 98 SKSPKPGSSILIDGGGEAEMVARHDALFELRFAEEVLPLLDRVGHMPLPPYI--DRPDEG 155
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D YQT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF PV+VE
Sbjct: 156 ADRERYQTVYAERAGAVAAPTAGLHFDQPLLEAIAAKGVETTFVTLHVGAGTFQPVRVEQ 215
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
+DH MH+E + A+ + + GGR+++VGTTS+R LE+A DG++ P+SG T+
Sbjct: 216 IEDHHMHTEWLEVGQDVVDAVAACRECGGRVIAVGTTSVRSLESA-ARDGVLKPFSGDTD 274
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PG F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+SYGD
Sbjct: 275 IFIYPGRPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFSYGDAM 334
Query: 355 LL 356
+
Sbjct: 335 FI 336
>gi|258593143|emb|CBE69454.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [NC10
bacterium 'Dutch sediment']
Length = 379
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 149/383 (38%), Positives = 202/383 (52%), Gaps = 44/383 (11%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+FD+ LPP IA PV RD +RL+V+ N + D + DLP +L D +V N
Sbjct: 9 DFDYTLPPELIAQAPVPERDRSRLLVLDRNTGA---LHDRIFRDLPEYLVPGDLLVINEA 65
Query: 65 KVITAQLNGVRFCHINRREK-EISCTLHMRVSPN-------SWSVYARPSKVIKKGDILH 116
KVI A+L F RR + E+ + V P+ W +PS+ ++ GD L
Sbjct: 66 KVIPARL----FGRSERRHQIEVLLLYEVEVDPDMGPAGTDRWEALIKPSRQVRIGDRLA 121
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARK------- 169
+ A VI+K G LL G L + G +P+PPYI R+
Sbjct: 122 L----ADDTITAEVIEKRGEGRHLLKLVYDG-RLADLLWRFGRMPVPPYIKRQGIGYRVE 176
Query: 170 -------RPIDARDYV---------DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGI 213
P+D Y+ YQT YAK +G+VAAPTAGLHFT +L+ L GI
Sbjct: 177 GLEQGFPSPLDPGPYLLDPNTLDRERYQTVYAKHEGAVAAPTAGLHFTPDLIETLTRQGI 236
Query: 214 KVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSL 273
V +TL VG GTF PV++++ H M E I TA A+ + + G R+++VGTT++
Sbjct: 237 AVTPITLFVGPGTFRPVRMKEVAQHRMEPERYIIPEQTALAVKAARREGRRVIAVGTTTV 296
Query: 274 RLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEET 333
R LE AT G I G T++FI PGYRF ++D +++NFHLP STL MLVSAF G E
Sbjct: 297 RTLEHATVM-GEIRAGVGLTDLFIYPGYRFTSIDAIITNFHLPCSTLFMLVSAFAGRETM 355
Query: 334 KKMYQHAISHAYRFYSYGDTSLL 356
Y+ AI+ YRFYSYGD L+
Sbjct: 356 LAAYREAIARCYRFYSYGDAMLI 378
>gi|66044475|ref|YP_234316.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. syringae B728a]
gi|76803813|sp|Q9L6W2|QUEA_PSEU2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|63255182|gb|AAY36278.1| Queuosine biosynthesis protein [Pseudomonas syringae pv. syringae
B728a]
Length = 354
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 153/367 (41%), Positives = 203/367 (55%), Gaps = 42/367 (11%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R S+RL+ L P ++ +DL L D +
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLL----TLDGPTGALAHRQFTDLLEHLRPGDLM 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDIL-HFF 118
VFNNT+VI A+L G +K L + V +V+ +L H
Sbjct: 57 VFNNTRVIPARLFG---------QKASGGKLEILVE-----------RVLDSHRVLAHVR 96
Query: 119 SQDGQSRLEATVIDKWNTGEILL----VFSISGIE-----LERQISLVGTIPLPPYIARK 169
S + +ID E++ +F + E LER VG +PLPPYI
Sbjct: 97 SSKSPKPGSSILIDGGGEAEMVARHDALFELRFAEEVLPLLER----VGRMPLPPYI--D 150
Query: 170 RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
RP + D YQT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF P
Sbjct: 151 RPDEGADRERYQTVYAQRAGAVAAPTAGLHFDQPLLEAIAAKGVETAFVTLHVGAGTFQP 210
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPW 289
V+VE +DH MHSE + A+ + ++RGGR+++VGTTS+R LE+A DG + +
Sbjct: 211 VRVEQIEDHHMHSEWLEVGQDVVDAVAACRARGGRVIAVGTTSVRSLESA-ARDGELKSF 269
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
SG T+IFI PG F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+S
Sbjct: 270 SGDTDIFIYPGRPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFS 329
Query: 350 YGDTSLL 356
YGD +
Sbjct: 330 YGDAMFI 336
>gi|330429272|gb|AEC20606.1| tRNA ribosyltransferase-isomerase [Pusillimonas sp. T7-7]
Length = 346
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 145/363 (39%), Positives = 204/363 (56%), Gaps = 42/363 (11%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FD++LP IA P R +RL+ +L + D +DLP L ND +V
Sbjct: 5 LELSQFDYELPQELIAQSPAARRTGSRLL----HLDSQAGLHDRQFADLPQLLRPNDLLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHM---RVSPNSWSV-YARPSKVIKKGDILH 116
FNNT+VI A+L G +KE + + R+S ++ + + SK K G L
Sbjct: 61 FNNTRVIKARLRG---------QKESGGKVEVLIERISGTRTALAHVKASKSPKPGSKLL 111
Query: 117 FFSQDGQSRLEATVIDKWNTGEIL-LVFSISGIELERQISLV---GTIPLPPYIARKRPI 172
V GE+ L F ER + L+ G PLPPYI +
Sbjct: 112 LADT-------FIVTVSGRQGELFELEFP------ERVLDLLDRHGATPLPPYI--EHAA 156
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+ D YQT YA G+VAAPTAGLHF +L++L ++GI FVTLHVGAGTF PV+
Sbjct: 157 EQEDDERYQTVYATEPGAVAAPTAGLHFDQAMLAQLAAMGIAQAFVTLHVGAGTFQPVRT 216
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT---EDGIINPW 289
+ DHIMH+E + T + + + ++ GGR+V++GTTS+R LE+A ++G+I
Sbjct: 217 QKLGDHIMHAERYSVPPETVELVKTTRAAGGRVVAIGTTSVRALESAAPHAHQNGVIE-- 274
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
G T +FITPGYR+ VD L++NFHLP+STLLMLVSA G+E ++ Y HA+ YRF+S
Sbjct: 275 -GDTQLFITPGYRYNWVDALLTNFHLPQSTLLMLVSALAGMEPIRRAYAHAVQSRYRFFS 333
Query: 350 YGD 352
YGD
Sbjct: 334 YGD 336
>gi|229592462|ref|YP_002874581.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
fluorescens SBW25]
gi|259551475|sp|C3K1N5|QUEA_PSEFS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|229364328|emb|CAY52079.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
fluorescens SBW25]
Length = 349
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 149/366 (40%), Positives = 206/366 (56%), Gaps = 40/366 (10%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R ++RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRASRLLTLD---GVSGALAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDIL-HFFS 119
FNNT+VI A+L G +K L + V +V+ +L H S
Sbjct: 58 FNNTRVIPARLFG---------QKASGGKLEILVE-----------RVLDSHRVLAHVRS 97
Query: 120 QDGQSRLEATVIDKWNTGEILL----VFSISGIE-----LERQISLVGTIPLPPYIARKR 170
+ +ID E++ +F + E LER VG +PLPPYI R
Sbjct: 98 SKSPKPGSSILIDGGGEAEMVARHDALFELKFAEEVLPLLER----VGHMPLPPYI--DR 151
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
P + D YQT Y++ G+VAAPTAGLHF LL + + G++ +VTLHVGAGTF PV
Sbjct: 152 PDEDSDRERYQTVYSQRLGAVAAPTAGLHFDQPLLDAIAAKGVETAYVTLHVGAGTFQPV 211
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWS 290
+V++ +DH MHSE + A+ + K+RGGR+++VGTTS+R LE+A DG++ P+S
Sbjct: 212 RVDNIEDHHMHSEWLEVSQDVVDAVEACKARGGRVIAVGTTSVRSLESA-ARDGVLKPFS 270
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G T+IFI PG F VD L++NFHLP+STLLMLVSAF G ET YQ AI + YRF+SY
Sbjct: 271 GDTDIFIYPGRPFHVVDCLVTNFHLPESTLLMLVSAFAGYPETMAAYQAAIDNGYRFFSY 330
Query: 351 GDTSLL 356
GD +
Sbjct: 331 GDAMFI 336
>gi|300114138|ref|YP_003760713.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Nitrosococcus watsonii C-113]
gi|299540075|gb|ADJ28392.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Nitrosococcus watsonii C-113]
Length = 344
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 141/364 (38%), Positives = 204/364 (56%), Gaps = 26/364 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F ++LP IA P R +RL+ + + ++ D +LP L++ D +V
Sbjct: 1 MQLSDFTYNLPKQLIAQYPPKRRGGSRLLSLEGSSG---IVKDQQFIELPELLSTGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTL-HMRVSPNSWSVYARPSKVIKKGDILHFFS 119
FNNTKVI A++ GV+ + E I L R + W+ P +
Sbjct: 58 FNNTKVIPAKIQGVKDSG-GKIEVLIERFLDQHRALAHVWA--NNPPRA----------- 103
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIE---LERQISLVGTIPLPPYIARKRPIDARD 176
GQS + ++ I +F + ++ L + + +G IPLPPYI RK + D
Sbjct: 104 --GQSLVMEQSVEVEVRKRIKGLFELRFLDPRPLPQLLEAIGQIPLPPYIQRK--TTSVD 159
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YA G++AAPTAGLHF LL RL + GI+ ++TLHVGAGTF PV+V++
Sbjct: 160 KERYQTVYASRPGAIAAPTAGLHFDKLLLKRLQAQGIQSGYITLHVGAGTFQPVRVKNIT 219
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H MHSE + + + GGRIV+VGTT++R LE A+ + GII P+ G T IF
Sbjct: 220 QHQMHSEYVEVSEQICTQIRDTQQAGGRIVAVGTTTVRALEAASAK-GIIAPYQGETEIF 278
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGYRFR V+ L++NFHLP++TLLMLV AF G ++ Y+HA+ YRF+SYGD +
Sbjct: 279 IFPGYRFRTVNALITNFHLPETTLLMLVCAFAGSKQVLTAYRHAVKKGYRFFSYGDAMFI 338
Query: 357 FQKR 360
+ +
Sbjct: 339 TESK 342
>gi|91207413|sp|Q5P721|QUEA_AZOSE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
Length = 345
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 142/359 (39%), Positives = 201/359 (55%), Gaps = 20/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FD+ LPP IA P+ R ++RL+V+ + D DLP + D +V
Sbjct: 3 LTLDDFDYLLPPELIAQAPLAERCASRLLVLDGER-----LDDRGFCDLPELVQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + I + + P+ R SK + G L
Sbjct: 58 FNDTRVIHARLYGTK-----ETGGHIEVLIERAIGPHEALAQVRASKSPRAGSRLRL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ TV+ + GE + ++ + G +PLPPYI R D D Y
Sbjct: 110 --ADAFDVTVLGR--VGEFFHLRFPDSHDVLDLLEHHGKLPLPPYI--DRSADEHDESRY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +GSVAAPTAGLHF +L+ L G+ ++TLHVGAGTF PV+V D +H M
Sbjct: 164 QTVYARERGSVAAPTAGLHFDQPMLAELAKKGVHGAWLTLHVGAGTFQPVRVNDLGEHRM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I T A+ + ++ G R+++VGTTSLR LE A +DG + +G T +FI PG
Sbjct: 224 HRERYVIPQETVAAIAATRAAGRRVIAVGTTSLRALEGA-AQDGPLEAGTGETELFILPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRF+ VD L++NFHLPKSTLLMLVSAF G+E ++ Y HA+ H+YRF+SYGD + +
Sbjct: 283 YRFQVVDALITNFHLPKSTLLMLVSAFAGLEPMRRAYTHAVGHSYRFFSYGDAMFITHR 341
>gi|50120058|ref|YP_049225.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pectobacterium atrosepticum SCRI1043]
gi|81645884|sp|Q6D856|QUEA_ERWCT RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|49610584|emb|CAG74029.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pectobacterium atrosepticum SCRI1043]
Length = 355
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 146/362 (40%), Positives = 212/362 (58%), Gaps = 25/362 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLV-SDLPAFLNSNDAI 59
M V +F F+LP S IA P R RL+ +L P H V +DL LN D +
Sbjct: 1 MRVADFSFELPESLIAHYPQAERSGCRLL----SLDGPTGDLTHGVFTDLLEKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + ++ + + + + R SK K G L
Sbjct: 57 VFNNTRVIPARLFGRKVS-----GGKLEVLVERVLDDHRILAHVRASKAPKPGTEL--LL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISL---VGTIPLPPYIARKRPIDARD 176
D +S ++AT++ + + +F + + +S+ +G +PLPPYI RP + D
Sbjct: 110 GDDES-VKATMVARHDA-----LFELHFDDSRDVLSILNDIGHMPLPPYI--DRPDEDAD 161
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT Y++ G+VAAPTAGLHF +L+ L + GI++ FVTLHVGAGTF PV+V+ +
Sbjct: 162 RELYQTVYSQRPGAVAAPTAGLHFDEPMLAALRAKGIEMAFVTLHVGAGTFQPVRVDTIE 221
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTN 294
DHIMH+E + A+ + K+RG R+++VGTTS+R LE+A ++D I P+ G T
Sbjct: 222 DHIMHAEYAEVPQDVVDAVLACKARGNRVIAVGTTSVRSLESAAQASQDAPIAPFFGDTK 281
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PGY +R +D L++NFHLP+STL+MLVSAF G + T Y+ A++ YRF+SYGD
Sbjct: 282 IFIYPGYHYRIIDALVTNFHLPESTLIMLVSAFAGYQNTMSAYREAVAEQYRFFSYGDAM 341
Query: 355 LL 356
+
Sbjct: 342 FI 343
>gi|292487435|ref|YP_003530307.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Erwinia
amylovora CFBP1430]
gi|292898676|ref|YP_003538045.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Erwinia
amylovora ATCC 49946]
gi|291198524|emb|CBJ45632.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Erwinia
amylovora ATCC 49946]
gi|291552854|emb|CBA19899.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Erwinia
amylovora CFBP1430]
gi|312171537|emb|CBX79795.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Erwinia
amylovora ATCC BAA-2158]
Length = 356
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 147/362 (40%), Positives = 208/362 (57%), Gaps = 25/362 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLV-SDLPAFLNSNDAI 59
M V +F F+LP S IA P R RL+ +L+ P H V +DL LN D +
Sbjct: 1 MRVADFTFELPESLIAHYPQAQRSGCRLL----SLNGPDGALTHGVFTDLLHQLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A++ G + +I + + + R SK K G L
Sbjct: 57 VFNNTRVIPARIFGRKAS-----GGKIEVLVERMLDEKRVLAHVRSSKAPKPGSEL--LL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISL---VGTIPLPPYIARKRPIDARD 176
D +S ++A ++ + +T +F I + + + +G +PLPPYI RP + D
Sbjct: 110 GDDES-VQAIMVARHDT-----LFEIEFNDARPVLDILNSIGHMPLPPYI--DRPDEDAD 161
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT Y++ G+VAAPTAGLHF LL L GI+ FVTLHVGAGTF PV+V+ +
Sbjct: 162 RELYQTVYSQKPGAVAAPTAGLHFDEPLLEALREKGIETVFVTLHVGAGTFQPVRVDTIE 221
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTN 294
DHIMH+E + A+ + K+RG R+++VGTTS+R LE+A E+ +I P+ G T
Sbjct: 222 DHIMHAEYAEVPQDVVDAVLACKARGKRVIAVGTTSVRSLESAAQAAENALIAPFFGDTK 281
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PGY ++ +D L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD
Sbjct: 282 IFIYPGYHYQVIDALVTNFHLPESTLIMLVSAFAGYQHTMHAYQQAVAQRYRFFSYGDAM 341
Query: 355 LL 356
+
Sbjct: 342 FI 343
>gi|71734363|ref|YP_273557.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. phaseolicola 1448A]
gi|91207393|sp|Q48M15|QUEA_PSE14 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|71554916|gb|AAZ34127.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. phaseolicola 1448A]
Length = 354
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 153/367 (41%), Positives = 203/367 (55%), Gaps = 42/367 (11%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R S+RL+ L P ++ +DL L D +
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLL----TLDGPTGALAHRQFTDLLEHLRPGDLM 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDIL-HFF 118
VFNNT+VI A+L G +K L + V +V+ +L H
Sbjct: 57 VFNNTRVIPARLFG---------QKASGGKLEILVE-----------RVLDSHRVLAHVR 96
Query: 119 SQDGQSRLEATVIDKWNTGEILL----VFSISGIE-----LERQISLVGTIPLPPYIARK 169
S + +ID E++ +F + E LER VG +PLPPYI
Sbjct: 97 SSKSPKPGSSILIDGGGEAEMVARHHALFELRFAEEVLPLLER----VGHMPLPPYI--D 150
Query: 170 RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
RP + D YQT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF P
Sbjct: 151 RPDEGADRERYQTVYAQRAGAVAAPTAGLHFDQPLLEAIAAKGVETAFVTLHVGAGTFQP 210
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPW 289
V+VE +DH MHSE + A+ + ++RGGR+++VGTTS+R LE+A DG + +
Sbjct: 211 VRVEQIEDHHMHSEWLEVGQDVVDAVAACRARGGRVIAVGTTSVRSLESA-ARDGELKSF 269
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
SG T+IFI PG F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+S
Sbjct: 270 SGDTDIFIYPGRPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAGAIEHGYRFFS 329
Query: 350 YGDTSLL 356
YGD +
Sbjct: 330 YGDAMFI 336
>gi|238795574|ref|ZP_04639089.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
mollaretii ATCC 43969]
gi|238720693|gb|EEQ12494.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
mollaretii ATCC 43969]
Length = 367
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 149/363 (41%), Positives = 211/363 (58%), Gaps = 27/363 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P R RL+ +L P H + +DL L D +
Sbjct: 6 MRVADFSFELPESLIAHYPQAQRSGCRLL----SLDGPTGALTHGIFTDLLDKLEPGDLL 61
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + ++ + + + + + SK K G L
Sbjct: 62 VFNNTRVIPARLFGRKASG-----GKLEVLVERVLDDHRVLAHVKASKSPKPGTEL--LL 114
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARKRPIDAR 175
D +S + AT++ + T +F + + ER + + VG +PLPPYI RP +
Sbjct: 115 GDDES-IRATMLARHET-----LFELR-FDDERDVFTILNAVGHMPLPPYI--DRPDEDA 165
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y++ G+VAAPTAGLHF +L+ L GI++ FVTLHVGAGTF PV+V+
Sbjct: 166 DRELYQTVYSERLGAVAAPTAGLHFDEPMLAALREKGIEMAFVTLHVGAGTFQPVRVDTI 225
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFT 293
++H+MHSE + A+ + K+RG R+V+VGTTS+R LE+A TE G+I P+ G T
Sbjct: 226 EEHVMHSEYAEVPQEVVDAVLACKARGKRVVAVGTTSVRSLESAANATEKGLIAPFFGDT 285
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFI PGY ++ VD L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD
Sbjct: 286 CIFIYPGYEYQVVDALVTNFHLPESTLIMLVSAFAGYKNTMNAYQQAVAEQYRFFSYGDA 345
Query: 354 SLL 356
+
Sbjct: 346 MFI 348
>gi|218889892|ref|YP_002438756.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
aeruginosa LESB58]
gi|226736742|sp|B7UVU3|QUEA_PSEA8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|218770115|emb|CAW25877.1| S-adenosylmethionine:trna ribosyltransferase-isomerase [Pseudomonas
aeruginosa LESB58]
Length = 347
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 155/366 (42%), Positives = 208/366 (56%), Gaps = 40/366 (10%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAI 59
M V +F FDLP + IA P+ R ++RL+ L P ++ +DL +L D +
Sbjct: 1 MRVADFHFDLPEALIARHPLPERRASRLLA----LDGPTGTLAHRQFADLLDYLRPGDLM 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVS----PNSWSVYARPSKVIKKGDIL 115
VFNNT+VI A+L G +KE L + V + + R SK K G
Sbjct: 57 VFNNTRVIPARLFG---------QKESGGKLEVLVERVLDQDRVLAHIRASKAPKPG--T 105
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIE-----LERQISLVGTIPLPPYIARKR 170
+ G S A ++ + + +F ++ E LER VG +PLPPYI R
Sbjct: 106 RILVEGGGS---AEMLQRHDA-----LFELAFAEPVLPLLER----VGHMPLPPYI--DR 151
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
P DA D YQT YA+ G+VAAPTAGLHF LL + + G+ FVTLHVGAGTF PV
Sbjct: 152 PDDAADRERYQTVYAQRAGAVAAPTAGLHFDEALLEAIRAKGVDTAFVTLHVGAGTFQPV 211
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWS 290
+VE +DH+MH E + A++ ++RGGR+V+VGTTS+R LE+A DG + P+S
Sbjct: 212 RVERIEDHVMHREWLEVGQDVVDAVSVCRARGGRVVAVGTTSVRSLESA-ARDGELKPFS 270
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G T+IFI PG F VD L++NFHLP+STLLMLVSAF G ET Y A++ YRF+SY
Sbjct: 271 GDTDIFIYPGRPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAVAQGYRFFSY 330
Query: 351 GDTSLL 356
GD +
Sbjct: 331 GDAMFI 336
>gi|56461306|ref|YP_156587.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase [Idiomarina
loihiensis L2TR]
gi|81599980|sp|Q5QVL1|QUEA_IDILO RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|56180316|gb|AAV83038.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase [Idiomarina
loihiensis L2TR]
Length = 351
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 140/359 (38%), Positives = 205/359 (57%), Gaps = 21/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ V +F F+LP IA P R ++RL+ V N + I ++ +N+ D +V
Sbjct: 9 LKVSDFSFELPDELIARYPQEQRSASRLLSVKANENS---IEHKHFKNIVDEINAGDLLV 65
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + ++ + + + + R ++ K G L
Sbjct: 66 FNDTRVIPARLLGEKVSG-----GKVEVLVERLLDDHRVLAHVRANRAPKAGAELLL--- 117
Query: 121 DGQSRLEATVIDKWNT-GEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ ++ T++ + + E+ + +EL Q G +PLPPYI RP ++ D
Sbjct: 118 --EGHVKITMLARHDALFELKFEHDETVLELLEQY---GHMPLPPYI--DRPDESSDKER 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y + G+VAAPTAGLHF +L +L G+ +VTLHVGAGTF PV+VED +DH+
Sbjct: 171 YQTVYNREPGAVAAPTAGLHFDDEILQQLRDKGVNSAYVTLHVGAGTFQPVRVEDINDHV 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFI 297
MHSE + A T A+ K+ GGR+++VGTTS+R LE+A + + I P+ TNIFI
Sbjct: 231 MHSEYAKVSAETCNAIKQTKASGGRVIAVGTTSVRSLESAAQASTNESIEPFFDDTNIFI 290
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY F+ VD +++NFHLP+STL+MLVSAF G + K Y AI YRF+SYGD LL
Sbjct: 291 YPGYEFKVVDSMITNFHLPESTLIMLVSAFVGRDLIMKAYNEAIKERYRFFSYGDAMLL 349
>gi|56476202|ref|YP_157791.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Aromatoleum
aromaticum EbN1]
gi|56312245|emb|CAI06890.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase, first step
of queuosine biosynthesis [Aromatoleum aromaticum EbN1]
Length = 354
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 142/359 (39%), Positives = 201/359 (55%), Gaps = 20/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FD+ LPP IA P+ R ++RL+V+ + D DLP + D +V
Sbjct: 12 LTLDDFDYLLPPELIAQAPLAERCASRLLVLDGER-----LDDRGFCDLPELVQPGDLLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + I + + P+ R SK + G L
Sbjct: 67 FNDTRVIHARLYGTK-----ETGGHIEVLIERAIGPHEALAQVRASKSPRAGSRLRL--- 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ TV+ + GE + ++ + G +PLPPYI R D D Y
Sbjct: 119 --ADAFDVTVLGR--VGEFFHLRFPDSHDVLDLLEHHGKLPLPPYI--DRSADEHDESRY 172
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +GSVAAPTAGLHF +L+ L G+ ++TLHVGAGTF PV+V D +H M
Sbjct: 173 QTVYARERGSVAAPTAGLHFDQPMLAELAKKGVHGAWLTLHVGAGTFQPVRVNDLGEHRM 232
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I T A+ + ++ G R+++VGTTSLR LE A +DG + +G T +FI PG
Sbjct: 233 HRERYVIPQETVAAIAATRAAGRRVIAVGTTSLRALEGA-AQDGPLEAGTGETELFILPG 291
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRF+ VD L++NFHLPKSTLLMLVSAF G+E ++ Y HA+ H+YRF+SYGD + +
Sbjct: 292 YRFQVVDALITNFHLPKSTLLMLVSAFAGLEPMRRAYTHAVGHSYRFFSYGDAMFITHR 350
>gi|119945875|ref|YP_943555.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Psychromonas ingrahamii 37]
gi|119864479|gb|ABM03956.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Psychromonas ingrahamii 37]
Length = 351
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 146/368 (39%), Positives = 210/368 (57%), Gaps = 31/368 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHL-VSDLPAFLNSNDAI 59
M V +F F+LPP+ IA P+ R ++RL+ V N S L HL +DL ++ ND +
Sbjct: 4 MKVSDFSFELPPALIARYPMKDRSASRLLSVEGN-SGEL---KHLQFTDLVDLIDENDLL 59
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVS----PNSWSVYARPSKVIKKGDIL 115
+FN+T+VI A+L G EKE + + V S+ + R SK K G L
Sbjct: 60 IFNDTRVIPARLFG---------EKETGGKIEVLVERVLDDKSFLAHLRSSKSPKPGCKL 110
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
++ ++A ++ + G + + G + + +G +PLPPYI RP +
Sbjct: 111 RL-----ENSIDAVMLKRQ--GPLFEIHIDHGSTVLEVLESIGHMPLPPYI--DRPDEDA 161
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y K G+VAAPTAGLHF ++++L G+ FVTLHVGAGTF PVKV++
Sbjct: 162 DKERYQTVYNKNPGAVAAPTAGLHFDQAVMTKLQDKGVDFAFVTLHVGAGTFQPVKVDNI 221
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED----GIINPWSG 291
DH MHSE + +N+ K++GGR+++VGTTS+R +E+A + P+
Sbjct: 222 LDHQMHSEYAEVSQEVIDKINTTKAKGGRVIAVGTTSVRSVESAAQVSVKMGNDLAPFFS 281
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T+IFI PGY+F+ +D L++NFHL +STLLMLVSAF G E Y+ AI YRF+SYG
Sbjct: 282 ETSIFIYPGYQFQIIDALVTNFHLSESTLLMLVSAFSGKENIDNAYKVAIQEKYRFFSYG 341
Query: 352 DTSLLFQK 359
D L +K
Sbjct: 342 DAMFLTKK 349
>gi|320161390|ref|YP_004174614.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Anaerolinea
thermophila UNI-1]
gi|319995243|dbj|BAJ64014.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Anaerolinea
thermophila UNI-1]
Length = 339
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 145/360 (40%), Positives = 203/360 (56%), Gaps = 24/360 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LPP IA PV PR ++RLMV++ I + ++ +L+ D +V
Sbjct: 1 MKTSDFDYFLPPECIAQHPVEPRHNSRLMVLNRANDS---IQHTIFWNITEYLHPGDILV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N T+VI A++ + H K + L RV ++W K +KG
Sbjct: 58 VNQTRVIPARI----YAHKETGGK-LEILLLRRVDDHTWEALI-GGKRPRKGKSFMI--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L T+I++ L+ F+ +E + +G +PLPPYI P+ RD Y
Sbjct: 109 --NEHLHGTIIEELEESRRLVRFNQP---VEPYLERIGQMPLPPYI--HEPL--RDPERY 159
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ GS AAPTAGLHFTS L+ R+ +GI+ VTLHVG TFMPV E+ +H +
Sbjct: 160 QTIFARQPGSAAAPTAGLHFTSELIERIAQMGIQFAEVTLHVGLDTFMPVHEENPLEHKI 219
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT---EDGIINPWSGFTNIFI 297
H+E + TAQ +N+ K GGRI++VGTTS+R LETA E + SG T+++I
Sbjct: 220 HTEWCELTEETAQKINAAKKEGGRIIAVGTTSVRTLETAAQYAREGEWVGAVSGATSLYI 279
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY FRAVD +++NFHLP+STL+MLVSAF G E Y+ AI YRFYS+GD L+
Sbjct: 280 LPGYTFRAVDAMITNFHLPRSTLIMLVSAFAGRERILNAYKVAIEQGYRFYSFGDAMLIL 339
>gi|90416765|ref|ZP_01224695.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [marine
gamma proteobacterium HTCC2207]
gi|90331518|gb|EAS46754.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [marine
gamma proteobacterium HTCC2207]
Length = 348
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 147/351 (41%), Positives = 200/351 (56%), Gaps = 20/351 (5%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
F FDLP IA +P R +RL+ + S + +DL + + D +VFNNTK
Sbjct: 6 FQFDLPDELIARQPAEQRQGSRLLYLD---SASEDLRHQQFTDLLSHIEPGDLMVFNNTK 62
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSR 125
VI A+L G + +I + +S +S + R SK K G+ L F ++G S
Sbjct: 63 VIAARLFGQK-----ESGGKIEVLVERVLSTDSVLAHIRASKSPKPGNQLLF--ENGYS- 114
Query: 126 LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYA 185
A ++ + + L FS +++ QI G +PLPPYI R D YQT YA
Sbjct: 115 --AEMLGRSD-ALFELRFSAPVLDVLDQI---GHMPLPPYIDRADT--EEDQSRYQTVYA 166
Query: 186 KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIG 245
G+VAAPTAGLHF +L+ + + G K+ FVTLHVGAGTF PV+ ++ DH MH+E
Sbjct: 167 DQLGAVAAPTAGLHFDDQMLADIKAKGAKIAFVTLHVGAGTFQPVRADNIHDHHMHTEWL 226
Query: 246 FIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRA 305
+ + K+ GGR+V+VGTTS+R LETA + G I P+ G TNIFI PGYRF
Sbjct: 227 QVSDEVCAQVRDTKAAGGRVVAVGTTSVRCLETAASS-GSIGPFEGDTNIFIFPGYRFNV 285
Query: 306 VDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
VD L++NFHL +STLLMLVSAF G + + Y A++ YRF+SYGD L
Sbjct: 286 VDALLTNFHLSESTLLMLVSAFAGYKPIMQAYSEAVAERYRFFSYGDAMFL 336
>gi|15599019|ref|NP_252513.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
aeruginosa PAO1]
gi|107103344|ref|ZP_01367262.1| hypothetical protein PaerPA_01004413 [Pseudomonas aeruginosa PACS2]
gi|254236728|ref|ZP_04930051.1| S-adenosylmethionine:trna ribosyltransferase-isomerase [Pseudomonas
aeruginosa C3719]
gi|254242515|ref|ZP_04935837.1| S-adenosylmethionine:trna ribosyltransferase-isomerase [Pseudomonas
aeruginosa 2192]
gi|21263918|sp|Q9HXH8|QUEA_PSEAE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|9949998|gb|AAG07211.1|AE004799_17 S-adenosylmethionine:trna ribosyltransferase-isomerase [Pseudomonas
aeruginosa PAO1]
gi|126168659|gb|EAZ54170.1| S-adenosylmethionine:trna ribosyltransferase-isomerase [Pseudomonas
aeruginosa C3719]
gi|126195893|gb|EAZ59956.1| S-adenosylmethionine:trna ribosyltransferase-isomerase [Pseudomonas
aeruginosa 2192]
Length = 347
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 155/366 (42%), Positives = 208/366 (56%), Gaps = 40/366 (10%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAI 59
M V +F FDLP + IA P+ R ++RL+ L P ++ +DL +L D +
Sbjct: 1 MRVADFHFDLPEALIARHPLPERRASRLLA----LDGPTGTLAHRQFADLLDYLRPGDLM 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVS----PNSWSVYARPSKVIKKGDIL 115
VFNNT+VI A+L G +KE L + V + + R SK K G
Sbjct: 57 VFNNTRVIPARLFG---------QKESGGKLEVLVERVLDQHRVLAHIRASKAPKPG--T 105
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIE-----LERQISLVGTIPLPPYIARKR 170
+ G S A ++ + + +F ++ E LER VG +PLPPYI R
Sbjct: 106 RILVEGGGS---AEMLQRHDA-----LFELAFAEPVLPLLER----VGHMPLPPYI--DR 151
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
P DA D YQT YA+ G+VAAPTAGLHF LL + + G+ FVTLHVGAGTF PV
Sbjct: 152 PDDAADRERYQTVYAQRAGAVAAPTAGLHFDEALLEAIRAKGVDTAFVTLHVGAGTFQPV 211
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWS 290
+VE +DH+MH E + A++ ++RGGR+V+VGTTS+R LE+A DG + P+S
Sbjct: 212 RVERIEDHVMHREWLEVGQDVVDAVSVCRARGGRVVAVGTTSVRSLESA-ARDGELKPFS 270
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G T+IFI PG F VD L++NFHLP+STLLMLVSAF G ET Y A++ YRF+SY
Sbjct: 271 GDTDIFIYPGRPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAVAQGYRFFSY 330
Query: 351 GDTSLL 356
GD +
Sbjct: 331 GDAMFI 336
>gi|253990965|ref|YP_003042321.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949]
gi|253782415|emb|CAQ85579.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Photorhabdus asymbiotica]
Length = 355
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 143/361 (39%), Positives = 212/361 (58%), Gaps = 23/361 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R S RL+ + ++ + +D+ LN+ D +V
Sbjct: 1 MRVSDFTFELPDEMIARYPQPQRSSCRLLSLDGATGA---LTHGVFTDVLNKLNAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + + R SK K+G L
Sbjct: 58 FNNTRVIPARIFGRKVTG-----GKLEVLVERILDDKRVLAHVRASKAPKEGTEL--LLG 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISL---VGTIPLPPYIARKRPIDARDY 177
D +S ++AT++ + +T +F I + +S+ VG +PLPPYI RP + D
Sbjct: 111 DNES-IKATMLARHDT-----LFEIRFDDERDVLSILDDVGHMPLPPYI--DRPDEEADR 162
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT Y++ G+VAAPTAGLHF LL+ L G+++ FVTLHVGAGTF PV+VE +D
Sbjct: 163 ELYQTVYSERPGAVAAPTAGLHFDEPLLNALREKGVEMVFVTLHVGAGTFQPVRVETIED 222
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT--EDGIINPWSGFTNI 295
H+MHSE + A+ + K+RG ++V+VGTTS+R LE+A +DG+I P+ T I
Sbjct: 223 HVMHSEYAEVPQNVVDAVLACKARGNKVVAVGTTSVRSLESAAAACKDGLIAPFFDDTRI 282
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PG+ ++ VD L++NFHLP+STL+MLVSAF G + T Y+ A++ YRF+SYGD
Sbjct: 283 FIYPGFEYQIVDALITNFHLPESTLIMLVSAFAGYKNTMNAYKEAVAEKYRFFSYGDAMF 342
Query: 356 L 356
+
Sbjct: 343 I 343
>gi|121592807|ref|YP_984703.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Acidovorax
sp. JS42]
gi|120604887|gb|ABM40627.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Acidovorax
sp. JS42]
Length = 366
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 141/367 (38%), Positives = 205/367 (55%), Gaps = 23/367 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LP IA P R +RL+ + P +D + +LP L D +VFN
Sbjct: 13 LSDFDFELPELLIAQHPAPQRSGSRLL---DGRTAP--PTDRIFRELPDLLQPGDLLVFN 67
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+V+ A++ G + ++ + ++ N + + SK G LH
Sbjct: 68 DTRVVKARVFGEKAS-----GGKLELLIERVLTGNEVVAHMKVSKKPLPGATLHLAGGAA 122
Query: 123 QSRLEATVIDKWNTGE-ILLVFSISGIELERQISLV---GTIPLPPYIARKR-----PID 173
+AT++ ++ + L ++ G E L+ G +PLPPYI R++ P
Sbjct: 123 AGGFDATLLGRYPDADGPLFRLALRGPAGESPWELMERHGHLPLPPYIERQQAGGNDPHA 182
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT +A+ G+VAAPTA LHF +L+RL GI+ VTLHVGAGTF PVK E
Sbjct: 183 GEDSERYQTVFARAPGAVAAPTAALHFDDAVLARLAERGIERASVTLHVGAGTFQPVKTE 242
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
+ +H MHSE + T AL + RGGR+V+VGTT++R LE+ +G T
Sbjct: 243 NLAEHRMHSEWYEVPLATLAALERCRQRGGRVVAVGTTTVRTLESWAASGQA----TGDT 298
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFITPG+ F+ VD+L++NFHLPKSTL+MLVSAF G E +Y+HA++ YRF+SYGD
Sbjct: 299 SIFITPGFSFQVVDLLLTNFHLPKSTLMMLVSAFAGYEHIMHLYRHAVAQRYRFFSYGDC 358
Query: 354 SLLFQKR 360
LL + R
Sbjct: 359 MLLERPR 365
>gi|297581139|ref|ZP_06943063.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae RC385]
gi|297534455|gb|EFH73292.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae RC385]
Length = 352
Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 141/366 (38%), Positives = 208/366 (56%), Gaps = 31/366 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N S LV D D+ + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPKAERTASRLLQLDGN-SGQLV--DGTFKDVLELVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + ++ + R SK K G L+
Sbjct: 58 FNNTRVIPARMFGRKASG-----GKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGEN 112
Query: 121 DG-----QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
D Q+R +A ++ ++L ++ +G +PLPPYI RP +
Sbjct: 113 DEFHAVMQARHDALFEIRFTAETVVLDI----------LNQIGHMPLPPYI--DRPDEEA 160
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y + G+VAAPTAGLHF LL ++ + G+++ +VTLHVGAGTF PV+VE+
Sbjct: 161 DKERYQTVYNQKPGAVAAPTAGLHFDQALLEQIQAKGVELAYVTLHVGAGTFQPVRVENI 220
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-----INPWS 290
DH MH+E + A+ + K+RGGR+V+VGTTS+R LE+A +D + + P+
Sbjct: 221 HDHHMHAEYVEVPQEVVDAIAATKARGGRVVAVGTTSVRSLESA-AQDALQKGTELKPFF 279
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G T IFI PGY+++ VD L++NFHLP+STL+MLVSAF G E Y+HA+ YRF+SY
Sbjct: 280 GDTEIFIFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYEHIMAAYEHAVKEQYRFFSY 339
Query: 351 GDTSLL 356
GD +
Sbjct: 340 GDAMFI 345
>gi|145637221|ref|ZP_01792883.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae PittHH]
gi|145269666|gb|EDK09607.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae PittHH]
Length = 363
Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 140/364 (38%), Positives = 207/364 (56%), Gaps = 19/364 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R S RL+ ++ I SD+ ++ D ++
Sbjct: 1 MRVSDFNFDLPDELIARYPKTDRVSCRLLQLNGENG---EIFHRTFSDVLDLIDQGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + + R SK K+G L F +
Sbjct: 58 FNNTRVIPARMFGRKASG-----GKIEVLVERMLDEHRFLAHIRSSKSPKEGAEL-FLGE 111
Query: 121 D--GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
D G++ V+ ++ + S L + +G +PLPPYI RP + D
Sbjct: 112 DKLGENNGIKAVMKARHSSLFEVELSDKSTALLDVLQTIGHMPLPPYI--DRPDEEADKE 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y+K+ G+VAAPTAGLHF NLL +L + G+ FVTLHVGAGTF PV+VE+ +DH
Sbjct: 170 CYQTVYSKVPGAVAAPTAGLHFDKNLLEKLKAKGVNFEFVTLHVGAGTFQPVRVENIEDH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTED----GIINPWSGF 292
+MH+E + A+ + K G R+++VGTTS+R +E+A + E+ +I P+
Sbjct: 230 VMHAEYVEVSQEVCNAIIATKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSD 289
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + T Y+ A+ Y F+SYGD
Sbjct: 290 TSIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKQAVQEKYCFFSYGD 349
Query: 353 TSLL 356
+
Sbjct: 350 AMFI 353
>gi|49087346|gb|AAT51447.1| PA3824 [synthetic construct]
Length = 348
Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 155/366 (42%), Positives = 208/366 (56%), Gaps = 40/366 (10%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAI 59
M V +F FDLP + IA P+ R ++RL+ L P ++ +DL +L D +
Sbjct: 1 MRVADFHFDLPEALIARHPLPERRASRLLA----LDGPTGTLAHRQFADLLDYLRPGDLM 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVS----PNSWSVYARPSKVIKKGDIL 115
VFNNT+VI A+L G +KE L + V + + R SK K G
Sbjct: 57 VFNNTRVIPARLFG---------QKESGGKLEVLVERVLDQHRVLAHIRASKAPKPG--T 105
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIE-----LERQISLVGTIPLPPYIARKR 170
+ G S A ++ + + +F ++ E LER VG +PLPPYI R
Sbjct: 106 RILVEGGGS---AEMLQRHDA-----LFELAFAEPVLPLLER----VGHMPLPPYI--DR 151
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
P DA D YQT YA+ G+VAAPTAGLHF LL + + G+ FVTLHVGAGTF PV
Sbjct: 152 PDDAADRERYQTVYAQRAGAVAAPTAGLHFDEALLEAIRAKGVDTAFVTLHVGAGTFQPV 211
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWS 290
+VE +DH+MH E + A++ ++RGGR+V+VGTTS+R LE+A DG + P+S
Sbjct: 212 RVERIEDHVMHREWLEVGQDVVDAVSVCRARGGRVVAVGTTSVRSLESA-ARDGELKPFS 270
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G T+IFI PG F VD L++NFHLP+STLLMLVSAF G ET Y A++ YRF+SY
Sbjct: 271 GDTDIFIYPGRPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAVAQGYRFFSY 330
Query: 351 GDTSLL 356
GD +
Sbjct: 331 GDAMFI 336
>gi|254167600|ref|ZP_04874451.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Aciduliprofundum boonei T469]
gi|289596968|ref|YP_003483664.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Aciduliprofundum boonei T469]
gi|197623409|gb|EDY35973.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Aciduliprofundum boonei T469]
gi|289534755|gb|ADD09102.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Aciduliprofundum boonei T469]
Length = 332
Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 137/357 (38%), Positives = 208/357 (58%), Gaps = 30/357 (8%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +DF+LP IA PV PRD ARLMV+ I +LP +++ D ++ N
Sbjct: 4 LRNYDFELPEELIAQEPVEPRDHARLMVLRKG------IEHRYFYNLPEYMDKGDVLILN 57
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKVI A++ G++ ++ + ++ N + + K I G +L F G
Sbjct: 58 DTKVIKARIRGIKDTG-----GKVEILILEKLGENYYRCLVKGKK-IHPGSVLIFEDIKG 111
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
V+ + N G + FS ++L R+ G +PLPPYI + P DA + YQT
Sbjct: 112 -------VVREKNEGICDIEFSGDIMDLARR---RGEVPLPPYI-KNPPTDAEE--KYQT 158
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
+A+ +G+VAAPTAGLHFT LL + G+K+ ++TLHV GTF PVK ED +H +
Sbjct: 159 VFARREGAVAAPTAGLHFTPQLLKEIEKKGVKIGYITLHVSYGTFKPVKTEDIREHRVDE 218
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E + A+ +N R GR+ +VGTT R LE+ ++++GII P G+T IFI PGY+
Sbjct: 219 EYYIVGEEVAKLIN---EREGRLFAVGTTVTRALES-SSKNGIIYPSRGYTIIFIYPGYK 274
Query: 303 FRA-VDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F++ +D L++NFH+P+S+L++LV+AF G E K Y+ AI YRFYS+GD L+F+
Sbjct: 275 FQSGIDALITNFHVPRSSLILLVTAFGGYERIMKAYRIAIEKKYRFYSFGDAMLIFK 331
>gi|94265186|ref|ZP_01288948.1| Queuosine biosynthesis protein [delta proteobacterium MLMS-1]
gi|93454327|gb|EAT04634.1| Queuosine biosynthesis protein [delta proteobacterium MLMS-1]
Length = 370
Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 139/370 (37%), Positives = 202/370 (54%), Gaps = 23/370 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+ LPP IA +P RD++RL+V + + D +L L+ D +VFN
Sbjct: 11 LSDYDYHLPPELIAQQPAARRDASRLLVCDCRGAG---LVDRHFPELLDLLSPGDLLVFN 67
Query: 63 NTKVITAQLNGVRFCHINRRE------------KEISCTLHMRVSPNSWSVYARPSKVIK 110
+T+V A+L G R R E ++ S ++W++ + SK +K
Sbjct: 68 DTRVFPARLLG-RKASGGRGELLLLEYPVAPAAADVGSAAGGESSFHAWAL-CKTSKGVK 125
Query: 111 KGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSIS-GIELERQISLVGTIPLPPYIARK 169
+G L F D L+A V++ G + ++ G L+ ++ G +PLPPYI R
Sbjct: 126 EGLKL-LFGDD----LQAEVVELGEGGRARVRLQVAAGQTLDGCLARHGRMPLPPYIRRS 180
Query: 170 RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
D YQT YA + G+VAAPTAGLHFT LL+ + + G++ VTLHVG GTF P
Sbjct: 181 EAETPEDRQRYQTVYAAVTGAVAAPTAGLHFTPELLAAIAAKGVRQARVTLHVGYGTFSP 240
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPW 289
V+V D +H +H E I A + ++ GGRI +VGTT++R LETA G + P
Sbjct: 241 VRVRDIREHAIHGEYYAITPENAALVEQTRAAGGRIWAVGTTAVRALETAADAAGRLTPG 300
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
SG ++I PGYRF+ VD L++NFHLP+S+LL LVSA G Y HA++ YRF+S
Sbjct: 301 SGICELYIYPGYRFKVVDNLLTNFHLPRSSLLFLVSALAGRRRILAAYNHAVARGYRFFS 360
Query: 350 YGDTSLLFQK 359
YGD + K
Sbjct: 361 YGDAMAIINK 370
>gi|315634692|ref|ZP_07889976.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Aggregatibacter segnis ATCC 33393]
gi|315476640|gb|EFU67388.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Aggregatibacter segnis ATCC 33393]
Length = 363
Score = 236 bits (601), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 142/369 (38%), Positives = 206/369 (55%), Gaps = 29/369 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ ++ I +D+ ++ D ++
Sbjct: 1 MRVADFYFDLPDELIARYPKTERTASRLLQLNGENGD---IFHRTFADVLELIHPGDLMI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + +S + + + R SK K+G L
Sbjct: 58 FNNTRVIPARMFGRKISG-----GKIEVLVERVLSESRFLAHVRASKAPKEGAELIL--- 109
Query: 121 DGQSRL-EATVIDKWNTGEILLVFSISGIELERQISL------VGTIPLPPYIARKRPID 173
G+ +L E + G +F I E +Q +L +G +PLPPYI RP +
Sbjct: 110 -GEDKLGEGNGVKALMVGRQGSLFEIEIAE--KQTALFDVLQQIGHMPLPPYI--DRPDE 164
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT Y K+ G+VAAPTAGLHF LL++L G+ FVTLHVGAGTF PV+VE
Sbjct: 165 EADQERYQTVYNKVPGAVAAPTAGLHFDDELLAKLKEKGVNFAFVTLHVGAGTFQPVRVE 224
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT------TEDGIIN 287
+ +DH+MH+E + A+ + K G R+++VGTTS+R +E+A D +I
Sbjct: 225 NIEDHVMHAEYVEVSQEVCDAIFATKKAGKRVIAVGTTSVRSIESAALAAEEKQRDVLIE 284
Query: 288 PWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
P+ T+IFI PG +FR VD L++NFHLP+STL+MLVSAF G T Y+ A+ + YRF
Sbjct: 285 PYFSDTSIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGFSHTMNAYKSAVENRYRF 344
Query: 348 YSYGDTSLL 356
+SYGD +
Sbjct: 345 FSYGDAMFI 353
>gi|320322942|gb|EFW79032.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. glycinea str. B076]
gi|320329935|gb|EFW85923.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. glycinea str. race 4]
Length = 354
Score = 235 bits (600), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 154/368 (41%), Positives = 202/368 (54%), Gaps = 44/368 (11%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R S+RL+ L P ++ +DL L D +
Sbjct: 1 MRVADFTFELPDSLIARHPLVERRSSRLL----TLDGPTGALAHRQFTDLLEHLRPGDLM 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVS--PNSWSVYARPSKVIKKGDILHF 117
VFNNT+VI A+L G +K L + V +S V A H
Sbjct: 57 VFNNTRVIPARLFG---------QKASGGKLEILVERVQDSHRVLA------------HV 95
Query: 118 FSQDGQSRLEATVIDKWNTGEILL----VFSISGIE-----LERQISLVGTIPLPPYIAR 168
S + +ID E++ +F + E LER VG +PLPPYI
Sbjct: 96 RSSKSPKPGSSILIDGGGEAEMVARHDALFELRFAEEVLPLLER----VGHMPLPPYI-- 149
Query: 169 KRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFM 228
RP + D YQT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF
Sbjct: 150 DRPDEGADRERYQTVYAQRAGAVAAPTAGLHFDQPLLEAIAAKGVETAFVTLHVGAGTFQ 209
Query: 229 PVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINP 288
PV+VE +DH MHSE + A+ + ++RGGR+++VGTTS+R LE+A DG +
Sbjct: 210 PVRVEQIEDHHMHSEWLEVGQDVVDAVAACRARGGRVIAVGTTSVRSLESA-ARDGELKS 268
Query: 289 WSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
+SG T+IFI PG F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+
Sbjct: 269 FSGDTDIFIYPGRPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAIEHGYRFF 328
Query: 349 SYGDTSLL 356
SYGD +
Sbjct: 329 SYGDAMFI 336
>gi|157376028|ref|YP_001474628.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Shewanella
sediminis HAW-EB3]
gi|157318402|gb|ABV37500.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Shewanella
sediminis HAW-EB3]
Length = 345
Score = 235 bits (600), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 143/368 (38%), Positives = 201/368 (54%), Gaps = 34/368 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R S+RL+ + N ++D+ +D+ +N D +V
Sbjct: 1 MRVTDFSFDLPDELIARYPMANRTSSRLLSLEGNTG---KLADNQFTDILNMVNPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK K I+
Sbjct: 58 FNNTRVIPARLFGQKITG-----GKLEILVERMLDDKRILAHVRCSKSPKADSIICL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQ--------ISLVGTIPLPPYIARKRPI 172
DG ++ +L + ELE Q + VG +PLPPYI RP
Sbjct: 110 DGDYEMK------------MLGRHDALFELELQSDKTILEVLEEVGHMPLPPYI--DRPD 155
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+ D YQT Y + G+VAAPTAGLHF LL L G+ FVTLHVGAGTF PVKV
Sbjct: 156 EDADKERYQTVYNQNPGAVAAPTAGLHFDDALLKALSDKGVDTAFVTLHVGAGTFQPVKV 215
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSG 291
++ +H MHSE + + K+ G R+++VGTTS+R LE+A +G + +
Sbjct: 216 DNILEHKMHSEWAEVSQEVVAKVAQTKANGKRVIAVGTTSVRSLESAAKASEGELKEFCS 275
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T+IFI PGY F+ VD +++NFHLP+STL+ML+SAF G +E K YQHAI+ YRF+SYG
Sbjct: 276 DTDIFIYPGYEFKVVDAMVTNFHLPESTLIMLLSAFAGFDEVKNAYQHAIAQKYRFFSYG 335
Query: 352 DTSLLFQK 359
D + +K
Sbjct: 336 DAMFVTKK 343
>gi|114563868|ref|YP_751382.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Shewanella
frigidimarina NCIMB 400]
gi|122299212|sp|Q07ZM1|QUEA_SHEFN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|114335161|gb|ABI72543.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Shewanella
frigidimarina NCIMB 400]
Length = 346
Score = 235 bits (600), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 142/369 (38%), Positives = 206/369 (55%), Gaps = 35/369 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R+++RL+ + S ++D +DL +N D +V
Sbjct: 1 MRVADFSFDLPDELIARYPTAQRNASRLLTLSGENSE---LADKKFTDLFNLINPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK K ++
Sbjct: 58 FNNTRVIPARLFGQKSTG-----GKLEILVERMLDDKRILAHVRSSKSPKVDTLIDL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQ--------ISLVGTIPLPPYIARKRPI 172
DG +++ +L + ELE Q + VG +PLPPYI RP
Sbjct: 110 DGGYQMK------------MLARHDALFELELQSDKTILEVLEDVGHMPLPPYI--DRPD 155
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+ D YQT Y + G+VAAPTAGLHF +L+ L + G+ + FVTLHVGAGTF PV+V
Sbjct: 156 EDTDKERYQTVYNQTPGAVAAPTAGLHFDDAMLADLKAKGVNIAFVTLHVGAGTFQPVRV 215
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWS 290
++ +H MHSE + + K+ G R+V+VGTTS+R LE+A + D + +S
Sbjct: 216 DNVLEHKMHSEWANVSQEVVDLIAQTKAAGNRVVAVGTTSVRSLESAARASGDSPLEAFS 275
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G T+IFI PG++F+ VD +++NFHLP+STL+ML+SAF G E K YQHAI+ YRF+SY
Sbjct: 276 GDTDIFIYPGFQFKVVDAMVTNFHLPESTLIMLLSAFAGYEAVMKAYQHAITQKYRFFSY 335
Query: 351 GDTSLLFQK 359
GD + +K
Sbjct: 336 GDAMFVTKK 344
>gi|157146979|ref|YP_001454298.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Citrobacter
koseri ATCC BAA-895]
gi|166216713|sp|A8AK49|QUEA_CITK8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|157084184|gb|ABV13862.1| hypothetical protein CKO_02756 [Citrobacter koseri ATCC BAA-895]
Length = 356
Score = 235 bits (600), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 148/359 (41%), Positives = 205/359 (57%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P R RL+ +L P H +DL LN D +
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLL----SLDGPTGALTHGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEVLVERMLDDKRILAHIRASKAPKPGAEL--LL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
D +S + AT+ + G + V + ++ +G +PLPPYI RP + D
Sbjct: 110 GDDES-INATMTARH--GALFEVEFNDARPVLEILNAIGHMPLPPYI--DRPDEDADREL 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y++ G+VAAPTAGLHF LL+ L GI++ FVTLHVGAGTF PV+VE +DHI
Sbjct: 165 YQTVYSEKPGAVAAPTAGLHFDDPLLAALREKGIEMAFVTLHVGAGTFQPVRVETIEDHI 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFI 297
MHSE + A+ + K+RG RI++VGTTS+R LE+A ++ +I P+ G T IFI
Sbjct: 225 MHSEYAEVPQEVVDAVLAAKARGNRIIAVGTTSVRSLESAAQAAKNDLIEPFFGDTQIFI 284
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 285 YPGYQYKVIDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEQNYRFFSYGDAMFI 343
>gi|294338718|emb|CAZ87050.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein queA) [Thiomonas sp. 3As]
Length = 391
Score = 235 bits (600), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 153/395 (38%), Positives = 210/395 (53%), Gaps = 47/395 (11%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +FDF LPP IA P R +RL+ + P + D DLP L + D +V
Sbjct: 5 LTADDFDFHLPPELIAQHPPARRSDSRLL----DAGNPPALIDRGFRDLPGLLRAGDLVV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTL---HMRVSPNSWSVYARPSKVIKKGDILHF 117
FN+T+VI A+L G + + + +R W+ + R SK K G +L
Sbjct: 61 FNDTRVIPARLWGFKAAGEAGAALGGAVEVLVERVRADNRVWA-HVRASKSPKPGQVLWL 119
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISG--------IELE---RQISLV---GTIPLP 163
G +R +A D+ + L + G ELE ++L+ G +PLP
Sbjct: 120 ----GAARPDAAAGDEPHASAPLFAVTTVGRAGPDGGLFELEFPAEPLALLQQYGAVPLP 175
Query: 164 PYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVG 223
PYI D D YQT YA+ GSVAAPTAGLHF +L+++ ++G + VTLHVG
Sbjct: 176 PYITHAPGGD--DVQRYQTVYAQHPGSVAAPTAGLHFDEAILAKIDAMGAQRAAVTLHVG 233
Query: 224 AGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGG------------RIVSVGTT 271
AGTF PV+V D H MHSE + TAQA+ V+ R R+V+VGTT
Sbjct: 234 AGTFQPVRVNDLRQHQMHSEWYTVPEATAQAIAKVRMRQAQARAAGQMHAAPRVVAVGTT 293
Query: 272 SLRLLETATT-------EDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLV 324
++R LE+A DG + P + T +F+TPGYRFR VD L++NFHLPKSTLLMLV
Sbjct: 294 AMRALESAALAAEAAGAPDGAVLPGARDTALFVTPGYRFRVVDALLTNFHLPKSTLLMLV 353
Query: 325 SAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
SAF G++ + Y HAI+ YRF+SYGD L ++
Sbjct: 354 SAFAGMDTIRAAYAHAIAQRYRFFSYGDAMWLTRQ 388
>gi|148981302|ref|ZP_01816362.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrionales
bacterium SWAT-3]
gi|145960934|gb|EDK26262.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrionales
bacterium SWAT-3]
Length = 350
Score = 235 bits (600), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 144/365 (39%), Positives = 207/365 (56%), Gaps = 23/365 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N ++D D+ + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQEERTASRLLKLDGNNGN---LTDGSFKDVLDLVEPGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + S + R SK K G L
Sbjct: 58 FNNTRVIPARVFGRKASG-----GKLEVLVERMLDEKSILAHVRCSKSPKPGTKLFLGEN 112
Query: 121 DGQSRLEATVIDKWNT-GEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
D EA +I + + EI S +E+ ++ VG +PLPPYI RP + D
Sbjct: 113 D---EYEAEMIARHDALFEIHFTSDQSVLEI---LNSVGHMPLPPYI--DRPDEDADKER 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y + G+VAAPTAGLHF L++ + + G++ +VTLHVGAGTF PVKV++ +DH
Sbjct: 165 YQTVYNEKPGAVAAPTAGLHFDDKLMADMKAKGVEFAYVTLHVGAGTFQPVKVDNINDHH 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN-----PWSGFTN 294
MH+E + A+ + K+RGGRI++VGTTS+R LE+A +D + N P+ G T
Sbjct: 225 MHAEYVEVPQEVVDAVAATKARGGRIIAVGTTSVRSLESA-AQDALKNGTELVPFFGDTE 283
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PGY ++ VD L++NFHLP+STL+MLVSAF G + Y HA+ YRF+SYGD
Sbjct: 284 IFIFPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYDNVMGAYDHAVKSEYRFFSYGDAM 343
Query: 355 LLFQK 359
+ +K
Sbjct: 344 FINKK 348
>gi|157961295|ref|YP_001501329.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
pealeana ATCC 700345]
gi|189038880|sp|A8H2K7|QUEA_SHEPA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|157846295|gb|ABV86794.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Shewanella
pealeana ATCC 700345]
Length = 345
Score = 235 bits (600), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 140/368 (38%), Positives = 205/368 (55%), Gaps = 34/368 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V ++ F+LP IA P R ++RL+ + N ++D +D+ +N D +V
Sbjct: 1 MRVADYSFELPDELIARYPTAERTASRLLSLDGNSGQ---LADLQFTDILEQVNPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + + ++ + + + R SK K I+
Sbjct: 58 FNNTRVIPARMFGTK-----QSGGKLEILVERMLDDKRVLAHVRCSKSPKVDSIVCL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQ--------ISLVGTIPLPPYIARKRPI 172
DG + ++L + EL Q + VG +PLPPYI RP
Sbjct: 110 DGGYEM------------VMLARHDALFELSLQSDKTILEVLEEVGHMPLPPYI--DRPD 155
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+ D YQT Y + G+VAAPTAGLHF +L+ L + G+ FVTLHVGAGTF PV+V
Sbjct: 156 EDADKERYQTVYNQNPGAVAAPTAGLHFDDAILAALKAKGVNTAFVTLHVGAGTFQPVRV 215
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSG 291
++ DH MHSE + + K+RG R+++VGTTS+R LE+A G++ +SG
Sbjct: 216 DNILDHKMHSEWAEVPQTVVDLIGETKARGNRVIAVGTTSVRSLESAAKASQGVLQSFSG 275
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T+IFI PGY+F+ VD +++NFHLP+STL+ML+SAF G +E K YQHAI+ YRF+SYG
Sbjct: 276 DTDIFIYPGYQFQVVDAMVTNFHLPESTLIMLLSAFAGFDEVKNAYQHAIAQKYRFFSYG 335
Query: 352 DTSLLFQK 359
D + +K
Sbjct: 336 DAMFVTKK 343
>gi|262165052|ref|ZP_06032789.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
mimicus VM223]
gi|262024768|gb|EEY43436.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
mimicus VM223]
Length = 352
Score = 235 bits (600), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 138/366 (37%), Positives = 207/366 (56%), Gaps = 31/366 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N + D D+ + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPKAERTASRLLQLDGNGGQ---LVDGTFKDVLGLVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + ++ + R SK K G L+
Sbjct: 58 FNNTRVIPARMFGRKASG-----GKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGEN 112
Query: 121 DG-----QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
D Q+R +A ++ ++L ++ +G +PLPPYI RP +
Sbjct: 113 DEFHAVMQARHDALFEIRFTAETVVLDI----------LNQIGHMPLPPYI--DRPDEDA 160
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y + G+VAAPTAGLHF LL ++ + G+++ +VTLHVGAGTF PV+VE+
Sbjct: 161 DKERYQTVYNQKPGAVAAPTAGLHFDQVLLEQIQAKGVELAYVTLHVGAGTFQPVRVENI 220
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-----INPWS 290
DH MH+E + A+ + K+RGGR+++VGTTS+R LE+A +D + + P+
Sbjct: 221 HDHHMHAEYVEVPQEVVDAVAATKARGGRVIAVGTTSVRSLESA-AQDALKKGTELKPFF 279
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G T IFI PGY+++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ YRF+SY
Sbjct: 280 GDTEIFIFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYEHTMAAYEHAVEEQYRFFSY 339
Query: 351 GDTSLL 356
GD +
Sbjct: 340 GDAMFI 345
>gi|215485486|ref|YP_002327917.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O127:H6 str. E2348/69]
gi|312964573|ref|ZP_07778829.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 2362-75]
gi|254764275|sp|B7UJM8|QUEA_ECO27 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|215263558|emb|CAS07888.1| S-adenosylmethionine: tRNA ribosyltransferase-isomerase
[Escherichia coli O127:H6 str. E2348/69]
gi|312290807|gb|EFR18684.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 2362-75]
gi|324010082|gb|EGB79301.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 57-2]
Length = 356
Score = 235 bits (600), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 145/365 (39%), Positives = 208/365 (56%), Gaps = 31/365 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R S RL+ +L P ++ +DL LN D +
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLL----SLDGPTGALTHGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEVLVERMLDDKRILAHIRASKAPKPGAEL-LLG 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISL------VGTIPLPPYIARKRPID 173
D R+ AT+ + ++ +E Q S+ +G +PLPPYI RP +
Sbjct: 111 DD--ERINATMTARHG--------ALFEVEFNDQRSVLDILNSIGHMPLPPYI--DRPDE 158
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+
Sbjct: 159 DADRELYQTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVD 218
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSG 291
+DHIMHSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+
Sbjct: 219 TIEDHIMHSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFD 278
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T IFI PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYG
Sbjct: 279 DTQIFIYPGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYG 338
Query: 352 DTSLL 356
D +
Sbjct: 339 DAMFI 343
>gi|329905131|ref|ZP_08274050.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Oxalobacteraceae bacterium IMCC9480]
gi|327547691|gb|EGF32476.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Oxalobacteraceae bacterium IMCC9480]
Length = 341
Score = 235 bits (600), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 147/355 (41%), Positives = 194/355 (54%), Gaps = 24/355 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDFDLP S IA P+ R ++RL+ + + D +D+ A L D +VFN
Sbjct: 4 LSDFDFDLPQSLIAQHPLAERSASRLLQLDGDTPV-----DRQFADIVALLTPGDLLVFN 58
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+V+ A RF + ++ + + + R SK G I+
Sbjct: 59 DTRVLKA-----RFFGNKQSGGKVEVLIERVLDARTVHAQIRSSKSPVAGSIVRL----- 108
Query: 123 QSRLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ TV GE L F EL I G +PLPPYI DA D YQ
Sbjct: 109 SDAFDVTV--GARAGEFFTLTFPSDVFEL---IETYGRLPLPPYI--DHTADAFDETRYQ 161
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YA+ G+VAAPTAGLHF LL +L GI+ FVTLHVGAGTF PV+ E +H MH
Sbjct: 162 TVYARTPGAVAAPTAGLHFDQALLDKLTEHGIRFAFVTLHVGAGTFQPVRTEVLAEHAMH 221
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
SE + A T A+ + ++ G +V+VGTTSLR LE+A ++ G + S T +FITPGY
Sbjct: 222 SEWYTLPAATVDAVRTTRAAGRDVVAVGTTSLRALESA-SQSGELVAGSADTRLFITPGY 280
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
RF+ V L++NFHLPKSTLLMLVSAF G + Y HAI+ YRF+SYGD L
Sbjct: 281 RFKTVTRLITNFHLPKSTLLMLVSAFAGYPAIRAAYAHAIAQQYRFFSYGDAMFL 335
>gi|294140344|ref|YP_003556322.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
violacea DSS12]
gi|293326813|dbj|BAJ01544.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
violacea DSS12]
Length = 345
Score = 235 bits (600), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 143/361 (39%), Positives = 206/361 (57%), Gaps = 20/361 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R S+RL+ + N ++D +D+ +N D +V
Sbjct: 1 MRVTDFSFELPNELIARYPTPERTSSRLLSLEGNTGQ---VTDKQFTDILNMVNPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + + ++ + + S + R SK K I+
Sbjct: 58 FNNTRVIPARLFGKK-----QTGGKLELLVERILDDKSILAHVRCSKSPKVDSIVCL--- 109
Query: 121 DGQSRLEATVIDKWNT-GEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
DG E ++ + + E+ LV + +E+ + VG +PLPPYI RP + D
Sbjct: 110 DGG--YEMIMLARHDALFELKLVSDKTILEV---LEEVGHMPLPPYI--DRPDEDADKER 162
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y K G+VAAPTAGLHF +L L G+ FVTLHVGAGTF PVKV++ +H
Sbjct: 163 YQTVYNKTPGAVAAPTAGLHFDDAILQALADKGVDTAFVTLHVGAGTFQPVKVDNILEHK 222
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFIT 298
MHSE + + K+ G R+++VGTTS+R LE+A +G + + T+IFI
Sbjct: 223 MHSEWAEVSQDVVDKVIQTKANGKRVIAVGTTSVRSLESAAKASEGALEAFCSDTDIFIY 282
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY+F+ VD +++NFHLP+STL+ML+SAF G +E K YQHAI+ YRF+SYGD + +
Sbjct: 283 PGYKFQVVDAMVTNFHLPESTLIMLLSAFAGFDEVKNAYQHAIAQKYRFFSYGDAMFVTK 342
Query: 359 K 359
K
Sbjct: 343 K 343
>gi|119775329|ref|YP_928069.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
amazonensis SB2B]
gi|166216750|sp|A1S7P3|QUEA_SHEAM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|119767829|gb|ABM00400.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
amazonensis SB2B]
Length = 345
Score = 235 bits (599), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 137/367 (37%), Positives = 207/367 (56%), Gaps = 32/367 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R ++RL+ + + ++D +D+ A + D ++
Sbjct: 1 MRVADFTFDLPDELIARYPMAERTASRLLHLDGSTGA---LADRQFTDILALIEPGDLMI 57
Query: 61 FNNTKVITAQLNGVRFCH------INRREKEISCTLHMRVSPNSWSVYARP-SKVIKKGD 113
FNNT+VI A+L G + + R + H+R S + +P +++I G
Sbjct: 58 FNNTRVIPARLFGQKASGGKLEILVERMLDDKRILAHVRSSKSP-----KPGAEIILDGG 112
Query: 114 ILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
+ E ++ D E+L VG +PLPPYI RP +
Sbjct: 113 FKMTMDARHDALFELSLKDDKTILEVL--------------EAVGHMPLPPYI--DRPDE 156
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT Y + G+VAAPTAGLHF ++L+ L + G+ + FVTLHVGAGTF PV+V+
Sbjct: 157 DTDKERYQTVYNERPGAVAAPTAGLHFDESILAALKAKGVDMAFVTLHVGAGTFQPVRVD 216
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGF 292
+ +H MHSE + A + + + K+ G R+++VGTTS+R LE+A +G + P+ G
Sbjct: 217 NVLEHKMHSEWAEVPADVVEKIRATKAAGKRVIAVGTTSVRSLESAAKASEGELEPFCGD 276
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFI PG+ F+ VD +++NFHLP+STL+MLVSAF G +E Y+HA+ YRF+SYGD
Sbjct: 277 TDIFIFPGFEFKVVDAMVTNFHLPESTLIMLVSAFAGFDEVIGAYRHAVEQKYRFFSYGD 336
Query: 353 TSLLFQK 359
+ +K
Sbjct: 337 AMFVTKK 343
>gi|152978729|ref|YP_001344358.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus succinogenes 130Z]
gi|150840452|gb|ABR74423.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Actinobacillus succinogenes 130Z]
Length = 380
Score = 235 bits (599), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 143/367 (38%), Positives = 202/367 (55%), Gaps = 19/367 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +F FDLP IA P R S+RL+ ++ I SD+ +N D +V
Sbjct: 22 MLVSDFHFDLPDELIARYPKPERTSSRLLQLNGENG---EIFHRTFSDVYGLINEGDLLV 78
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ ++ S+ + R SK K G L +
Sbjct: 79 FNNTRVIPARMYGRKISG-----GKVEVLAERILTETSFLAHVRSSKAPKAGAEL-ILGE 132
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARDYV 178
D + L IS L + +G +PLPPYI RP + D
Sbjct: 133 DKLGEGNGVRMKMLGRQGALFELEISEKPTALLDVLQKIGHMPLPPYI--DRPDEEADQE 190
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y K+ G+VAAPTAGLHF LL++L + G+ FVTLHVGAGTF PV+V+ +DH
Sbjct: 191 RYQTVYNKVPGAVAAPTAGLHFDDELLAKLKAKGVNFAFVTLHVGAGTFQPVRVDKIEDH 250
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET---ATTEDG---IINPWSGF 292
MH+E + A+ + K+ G R+++VGTTS+R LE+ A E G +I P+
Sbjct: 251 HMHAEYAEVPQEVVNAVLATKAAGKRVIAVGTTSVRSLESAALAAEEKGSSQLIEPFFSD 310
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + + Y+ A+ + YRF+SYGD
Sbjct: 311 TSIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNIMQAYKSAVENRYRFFSYGD 370
Query: 353 TSLLFQK 359
L +K
Sbjct: 371 AMFLTKK 377
>gi|218552968|ref|YP_002385881.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli IAI1]
gi|226736738|sp|B7M3P4|QUEA_ECO8A RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|218359736|emb|CAQ97277.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli IAI1]
Length = 356
Score = 235 bits (599), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 146/363 (40%), Positives = 208/363 (57%), Gaps = 27/363 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R S RL+ +L P H +DL LN D +
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLL----SLDGPTGALTHGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + R SK K G
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEVLVERMLDDKRILAHIRASKAPKPG--AELLL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARKRPIDAR 175
D +S + AT+ + +F + G ER + + +G +PLPPYI RP +
Sbjct: 110 GDDES-INATMTARHGA-----LFEV-GFNDERSVLDILNSIGHMPLPPYI--DRPDEDA 160
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+
Sbjct: 161 DRELYQTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTI 220
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFT 293
+DHIMHSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T
Sbjct: 221 EDHIMHSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDT 280
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFI PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD
Sbjct: 281 QIFIYPGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDA 340
Query: 354 SLL 356
+
Sbjct: 341 MFI 343
>gi|310766809|gb|ADP11759.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Erwinia sp.
Ejp617]
Length = 358
Score = 235 bits (599), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 146/368 (39%), Positives = 207/368 (56%), Gaps = 37/368 (10%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLV-SDLPAFLNSNDAI 59
M V +F F+LP S IA P R RL+ +L+ P H V +DL LN D +
Sbjct: 3 MRVADFTFELPESLIAHYPQTQRSGCRLL----SLNGPDGALTHGVFTDLLHKLNPGDLL 58
Query: 60 VFNNTKVITAQLNGVRFCH------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGD 113
VFNNT+VI A++ G + + R E H+R S RP + GD
Sbjct: 59 VFNNTRVIPARIFGRKVSGGKIEVLVERMLDEKRVLAHVRSSKAP-----RPGSELLLGD 113
Query: 114 ILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISL---VGTIPLPPYIARKR 170
++AT++ + + +F I + + + +G +PLPPYI R
Sbjct: 114 ---------DENVQATMLARHDA-----LFEIKFNDARPVLDILNSIGHMPLPPYI--DR 157
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
P + D YQT Y++ G+VAAPTAGLHF LL L GI+ FVTLHVGAGTF PV
Sbjct: 158 PDEDADRELYQTVYSQKPGAVAAPTAGLHFDEPLLEALREKGIETAFVTLHVGAGTFQPV 217
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINP 288
+V+ ++HIMH+E + +A+ + K+RG R+++VGTTS+R LE+A E+ +I P
Sbjct: 218 RVDTIEEHIMHAEYAEVPQDVVEAVLACKARGKRVIAVGTTSVRSLESAAQAAENALIAP 277
Query: 289 WSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
+ G T IFI PGY ++ +D L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+
Sbjct: 278 FFGDTKIFIYPGYHYQVIDALVTNFHLPESTLIMLVSAFAGYQNTMHAYQQAVAEQYRFF 337
Query: 349 SYGDTSLL 356
SYGD +
Sbjct: 338 SYGDAMFI 345
>gi|120598341|ref|YP_962915.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
sp. W3-18-1]
gi|166217772|sp|A1RI66|QUEA_SHESW RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|120558434|gb|ABM24361.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Shewanella
sp. W3-18-1]
Length = 345
Score = 235 bits (599), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 141/360 (39%), Positives = 199/360 (55%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R+++RL+ + N + D +DL +N D +V
Sbjct: 1 MRVADFSFDLPDELIARYPMAQRNASRLLTLDGNSGA---LGDKQFTDLLEMINPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + + R SK K ++H
Sbjct: 58 FNNTRVIPARMFGQKAS-----GGKLEILVERMLDDKRILAHVRSSKSPKVDSLIHL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DG +++ LL LE VG +PLPPYI RP + D Y
Sbjct: 110 DGGYQMKMVARHDTLFELELLSELTILEVLE----AVGHMPLPPYI--DRPDEDADKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF +L L + G+ + FVTLHVGAGTF PV+V+ +H M
Sbjct: 164 QTVYNQNPGAVAAPTAGLHFDDAMLDALKAKGVNIAFVTLHVGAGTFQPVRVDTIVEHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFITP 299
HSE + + K+ G R+V+VGTTS+R LE+A G + +SG T+IFI P
Sbjct: 224 HSEWANVPQDVVDLIAQTKAAGKRVVAVGTTSVRSLESAARASLGELKAFSGDTDIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY+F+ VD +++NFHLP+STL+MLVSAF G + YQHAI+ YRF+SYGD + +K
Sbjct: 284 GYQFQVVDAMVTNFHLPESTLIMLVSAFAGFDHVMAAYQHAITQKYRFFSYGDAMFVTKK 343
>gi|303251428|ref|ZP_07337604.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|307252337|ref|ZP_07534234.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|302649660|gb|EFL79840.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|306860259|gb|EFM92275.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 6 str. Femo]
Length = 361
Score = 235 bits (599), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 146/370 (39%), Positives = 202/370 (54%), Gaps = 34/370 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +F FDLP IA P R ++RL+ ++ D SDL +N D ++
Sbjct: 1 MLVSDFHFDLPDELIARYPTEERTASRLLHLNGETGH---FEDKQFSDLLDQINEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCH------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
FNNT+VI A+L G + + R E C H+R S K K+G
Sbjct: 58 FNNTRVIPARLYGRKASGGKLEVLVERVLDEHRCLAHVRAS-----------KAPKEGAE 106
Query: 115 LHFFSQDGQSRL-EATVIDKWNTGEILLVFSISGIELERQISLV---GTIPLPPYIARKR 170
L G+ +L E T +F + E + L+ G +PLPPYI R
Sbjct: 107 LVL----GEDKLGEGNGFKAIMTARHDALFELHFNEEQPVFDLLQQAGHMPLPPYI--DR 160
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
P + D YQT Y+K+ G+VAAPTAGLHF + L +L S G+ + FVTLHVGAGTF PV
Sbjct: 161 PDEDADQERYQTVYSKVLGAVAAPTAGLHFDNPTLEKLKSKGVNIAFVTLHVGAGTFQPV 220
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGII 286
+V++ DH MH+E + + + K+ G R+++VGTTS+R +E+A E +I
Sbjct: 221 RVDNILDHKMHAEYAEVSQAVVDQILATKATGKRVIAVGTTSVRSIESAAQAAEKEGKLI 280
Query: 287 NPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYR 346
P+ T+IF+ PG FR VD L++NFHLP+STL+MLVSAF G T K YQHA+ YR
Sbjct: 281 APFFSDTSIFLYPGKTFRIVDALVTNFHLPESTLIMLVSAFAGYRNTMKAYQHAVEAKYR 340
Query: 347 FYSYGDTSLL 356
F+SYGD +
Sbjct: 341 FFSYGDAMFI 350
>gi|78222071|ref|YP_383818.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Geobacter
metallireducens GS-15]
gi|91207424|sp|Q39XD1|QUEA_GEOMG RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|78193326|gb|ABB31093.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Geobacter
metallireducens GS-15]
Length = 343
Score = 235 bits (599), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 143/357 (40%), Positives = 202/357 (56%), Gaps = 24/357 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD++LPP IA P+ RD+ RLM V + + ++ D +V
Sbjct: 1 MRVDDFDYELPPELIAQEPLDRRDATRLMTVD---RLKGEVGEVSFREITRLFRPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
N+T+VI A RF + + L R++ W R SK + G
Sbjct: 58 VNDTRVIPA-----RFFGVKESGGRVEVFLERRLAAVGERWQCLLRSSKPSRPG--TRIV 110
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFS-ISGIE--LERQISLVGTIPLPPYIARKRPIDAR 175
+G S A VI + + + F+ ++G + LER G +PLPPYI R+ DA
Sbjct: 111 LAEGVS---AEVIGRSDGDTWCVSFTPVTGFDEWLERN----GAMPLPPYI-RRSAADA- 161
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT +++ +G+VAAPTAGLHFT LL L G+++ +TLHVG GTFMP++VE
Sbjct: 162 DRERYQTVFSRQRGAVAAPTAGLHFTPELLDELRERGVEIATLTLHVGLGTFMPIRVERV 221
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
++H MH E I + TA A+N+ K GR++++GTT+ R LE A +DG + +G T I
Sbjct: 222 EEHRMHRERYIIPSATADAVNARKGGKGRVIALGTTTCRTLEHAARDDGRVAAGAGETGI 281
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
FI PGY F+ VD L++NFHLPKSTLLMLVSAF G E + Y A++ +RF+SYGD
Sbjct: 282 FIYPGYHFKTVDALITNFHLPKSTLLMLVSAFAGKELLFRAYHEAVTRRFRFFSYGD 338
>gi|330807626|ref|YP_004352088.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|327375734|gb|AEA67084.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 349
Score = 235 bits (599), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 146/358 (40%), Positives = 200/358 (55%), Gaps = 24/358 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R ++RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRASRLLTLD---GVSGAMAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FNNT+VI A+L G +K L + V +S V A
Sbjct: 58 FNNTRVIPARLFG---------QKASGGKLEILVERVLDSHRVLAHVRSSKSPKPGSSIL 108
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
G EA ++ + + L F+ + L + VG +PLPPYI RP + D
Sbjct: 109 IDGGG---EARMVARHDA-LFELAFAEEVLPL---LDRVGHMPLPPYI--DRPDEGSDRE 159
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF PV+VE +DH
Sbjct: 160 RYQTVYAERLGAVAAPTAGLHFDQPLLEAIAAKGVETAFVTLHVGAGTFQPVRVERIEDH 219
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E + A+ + ++RGGR+V+VGTTS+R LE+A DG++ P+SG T+IFI
Sbjct: 220 HMHNEWLEVSQEVVDAVAACRARGGRVVAVGTTSVRSLESA-ARDGVLKPFSGDTDIFIY 278
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PG F VD L++NFHLP+STLLMLVSAF G E Y+ A+ H YRF+SYGD +
Sbjct: 279 PGRPFHVVDALVTNFHLPESTLLMLVSAFAGYPEAMAAYKAAVEHGYRFFSYGDAMFI 336
>gi|290474706|ref|YP_003467586.1| S-adenosylmethionine:tRNA (m6t6A37) ribosyltransferase-isomerase
[Xenorhabdus bovienii SS-2004]
gi|289174019|emb|CBJ80806.1| S-adenosylmethionine:tRNA (m6t6A37) ribosyltransferase-isomerase
[Xenorhabdus bovienii SS-2004]
Length = 355
Score = 235 bits (599), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 141/362 (38%), Positives = 209/362 (57%), Gaps = 25/362 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R RL+ + ++ + +D+ L + D +V
Sbjct: 1 MRVADFTFELPEELIAHYPQPQRSGCRLLALDGKTGG---LTHGIFTDVLDKLEAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK +K+G L +
Sbjct: 58 FNNTRVIPARLFGRKATG-----GKLEVLVERMLDNKRVLAHVRASKALKEGAEL-LLGE 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARKRPIDARD 176
D R AT++ + +T +F I + +R + +G +PLPPYIAR P + D
Sbjct: 112 DESIR--ATMLARHDT-----LFEIR-FDDDRDVLTILDEIGHMPLPPYIAR--PDEESD 161
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT Y++ G+VAAPTAGLHF LL+ L G+ + FVTLHVGAGTF PV+VE +
Sbjct: 162 RELYQTVYSERPGAVAAPTAGLHFDEPLLAALREKGVDMAFVTLHVGAGTFQPVRVETIE 221
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTN 294
DHIMH+E + A+ + K+RG ++V+VGTTS+R LE+A ++G+I P+ T
Sbjct: 222 DHIMHAEYAEVPQNVVDAVLACKARGNKVVAVGTTSVRSLESAARACQNGLIEPFFDDTQ 281
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PG+ ++ VD L++NFHLP+STL+MLVSAF G + T Y+ A++ YRF+SYGD
Sbjct: 282 IFIYPGFEYQVVDALITNFHLPESTLIMLVSAFAGYQNTMNAYKEAVAEKYRFFSYGDAM 341
Query: 355 LL 356
+
Sbjct: 342 FI 343
>gi|94267972|ref|ZP_01291047.1| Queuosine biosynthesis protein [delta proteobacterium MLMS-1]
gi|93451777|gb|EAT02535.1| Queuosine biosynthesis protein [delta proteobacterium MLMS-1]
Length = 370
Score = 235 bits (599), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 136/369 (36%), Positives = 202/369 (54%), Gaps = 21/369 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+ LPP IA +P RD++RL+V ++D +L L+ D +VFN
Sbjct: 11 LSDYDYHLPPELIAQQPAARRDASRLLVCDCRDGG---LADRHFPELLDLLSPGDLLVFN 67
Query: 63 NTKVITAQLNGVRFCH-----------INRREKEISCTLHMRVSPNSWSVYARPSKVIKK 111
+T+V A+L G + + + ++ S ++W++ + SK +K+
Sbjct: 68 DTRVFPARLLGHKSSGGRGELLLLEYPVAQAAADVGSAEGGESSFHAWAL-CKTSKGVKE 126
Query: 112 GDILHFFSQDGQSRLEATVIDKWNTGEILLVFSIS-GIELERQISLVGTIPLPPYIARKR 170
G L F D L+A V++ G + ++ G L+ ++ G +PLPPYI R
Sbjct: 127 GLKL-LFGDD----LQAEVVELGEGGRARVRLQVAAGQTLDGCLARHGRMPLPPYIRRSE 181
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
D YQT YA + G+VAAPTAGLHFT LL+ + + G++ VTLHVG GTF PV
Sbjct: 182 TETPEDRQRYQTVYAAVTGAVAAPTAGLHFTPELLAAIAAKGVRQARVTLHVGYGTFSPV 241
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWS 290
+V D +H +H E I A + ++ GGRI +VGTT++R LETA G + P S
Sbjct: 242 RVRDIREHAIHGEYYAITPENAALVEQTRAAGGRIWAVGTTAVRALETAADAAGRLTPGS 301
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G ++I PGYRF+ VD L++NFHLP+S+LL LVSA G Y HA++ YRF+SY
Sbjct: 302 GICELYIYPGYRFKVVDNLLTNFHLPRSSLLFLVSALAGRRRILAAYNHAVARGYRFFSY 361
Query: 351 GDTSLLFQK 359
GD + K
Sbjct: 362 GDAMAIINK 370
>gi|33152347|ref|NP_873700.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
ducreyi 35000HP]
gi|46576951|sp|Q7VLY1|QUEA_HAEDU RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|33148570|gb|AAP96089.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
ducreyi 35000HP]
Length = 361
Score = 235 bits (599), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 151/369 (40%), Positives = 211/369 (57%), Gaps = 32/369 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +F F+LP IA P R ++RL+ H N SD SDL +N D ++
Sbjct: 1 MLVSDFHFNLPDELIARYPKDERTASRLL--HLNGESG-KFSDLHFSDLLDHINPGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCH------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
FNNT+VI A+L G + I R E C H+R S + +K+I D
Sbjct: 58 FNNTRVIPARLYGRKESGGKLEVLIERVLDEHHCLAHIRCSKAPKA----GTKLILGEDK 113
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSI---SGIELERQISLVGTIPLPPYIARKRP 171
L + LEAT+I + +T +F + + L + G IPLPPYI RP
Sbjct: 114 LGI-----GNGLEATMISRHDT-----LFELRFNATTPLFTLLQQAGHIPLPPYI--DRP 161
Query: 172 IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK 231
+ D YQT Y+K+ G+VAAPTAGLHF + +L +L + G+ + FVTLHVGAGTF PV+
Sbjct: 162 DEDFDQERYQTVYSKVLGAVAAPTAGLHFDNPMLDKLKAKGVNMAFVTLHVGAGTFQPVR 221
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET---ATTEDG-IIN 287
VE+ +H MH+E + + + K+ G R+++VGTTS+R +E+ AT G +I
Sbjct: 222 VENILEHNMHAEYAEVTQAVVDQILATKAAGKRVIAVGTTSVRSIESAAQATQPTGKLIA 281
Query: 288 PWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
P+ TNIF+ PG F+ VD+L++NFHLP+STL+MLVSAF G T YQHA+ YRF
Sbjct: 282 PFFSDTNIFLYPGKTFKIVDVLITNFHLPESTLIMLVSAFAGYRHTMNAYQHAVQQKYRF 341
Query: 348 YSYGDTSLL 356
+SYGD L+
Sbjct: 342 FSYGDAMLI 350
>gi|254246280|ref|ZP_04939601.1| NAS-adenosylmethionine [Burkholderia cenocepacia PC184]
gi|124871056|gb|EAY62772.1| NAS-adenosylmethionine [Burkholderia cenocepacia PC184]
Length = 355
Score = 235 bits (599), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 146/361 (40%), Positives = 204/361 (56%), Gaps = 21/361 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LPP IA + R ++RL+ V +++ P + D ++LP+ + D +VFN
Sbjct: 4 LSDFDFNLPPELIAQTALPDRTASRLLEVDGSVA-PARLVDRHFAELPSCIAPGDLLVFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKV+ A RF +I + ++ R SK G L
Sbjct: 63 DTKVLKA-----RFFGQKASGGKIEVLIERVTGTHTALAQIRASKSPGAGTTLRL----- 112
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
E TV ++ L F ++L I G +PLPPYI + DA D YQT
Sbjct: 113 ADAFEVTVGERVEPF-FTLHFPAPCLDL---IEQHGRLPLPPYI--EHDADATDETRYQT 166
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA G+VAAPTAGLHF LL +L ++G++ +TLHVGAGTF PV+VE+ +H MHS
Sbjct: 167 VYASNPGAVAAPTAGLHFDQPLLEKLDAMGVERATLTLHVGAGTFQPVRVENIAEHKMHS 226
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGF---TNIFIT 298
E + + + ++RGG +++VGTTS+R LE A + D P + T+IFIT
Sbjct: 227 EWYDLPQSLVDKIAATRARGGNVIAVGTTSMRALEAAARSADEAGRPLAATQAETDIFIT 286
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGYRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI YRF+SYGD LL +
Sbjct: 287 PGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIRAAYRHAIEERYRFFSYGDAMLLTR 346
Query: 359 K 359
+
Sbjct: 347 R 347
>gi|319651691|ref|ZP_08005818.1| S-adenosylmethionine-tRNA-ribosyltransferase-isomerase [Bacillus
sp. 2_A_57_CT2]
gi|317396758|gb|EFV77469.1| S-adenosylmethionine-tRNA-ribosyltransferase-isomerase [Bacillus
sp. 2_A_57_CT2]
Length = 286
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 130/298 (43%), Positives = 179/298 (60%), Gaps = 14/298 (4%)
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
+ N+TKV+ A+L F I L ++ +SW +P+K +K+G + F
Sbjct: 1 MLNDTKVLPARL----FGEKTGTGANIEVLLLKQLEGDSWETLVKPAKRVKEGTEITF-- 54
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G L A + G +L F GI E + +G +PLPPYI K +D RD
Sbjct: 55 --GNGNLTAVCTGTSDHGGRVLEFKYDGIFYE-VLEELGEMPLPPYI--KEQLDDRD--R 107
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A+ +GS AAPTAGLHFT LL + +G+ + F+TLHVG GTF PV V+D ++H
Sbjct: 108 YQTVFARERGSAAAPTAGLHFTEQLLEEIKEMGVHIAFITLHVGLGTFRPVSVDDLNEHE 167
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFIT 298
MH+E + TA+ LN V+ +GGRI+SVGTTS R LET A+ +G SG+T+IFI
Sbjct: 168 MHAEFYQVTEGTARLLNEVREQGGRIISVGTTSTRTLETIASMHNGRFEEASGWTDIFIY 227
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY F+A+D +++NFHLPKSTL+MLVSA G E Y A+ YRF+S+GD L+
Sbjct: 228 PGYEFKAIDGMITNFHLPKSTLIMLVSALAGRENVLNAYNQAVEEHYRFFSFGDAMLI 285
>gi|224826233|ref|ZP_03699335.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Lutiella
nitroferrum 2002]
gi|224601334|gb|EEG07515.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Lutiella
nitroferrum 2002]
Length = 355
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 144/362 (39%), Positives = 214/362 (59%), Gaps = 26/362 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+ LP IA P R ++RL+ V L ++D + + D +V
Sbjct: 15 MQLSDFDYHLPDELIAQHPPEHRGASRLLHVDG-----LALADLSFGAVLERIQPGDVMV 69
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + ++ + + ++ + R SK K G + F
Sbjct: 70 FNDTRVIKARLFGEKASG-----GKVEALVERVLDEHTVWAHVRASKSPKPGSTITF--- 121
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLV---GTIPLPPYIARKRPIDARDY 177
R +A ++++ + +F + ++ E ++ G +PLPPYI +R D+ D
Sbjct: 122 --AGRWQAEMVERDDA-----LFKLRFLDAENVFDILEASGKLPLPPYI--ERDTDSDDD 172
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YA+ +G+VAAPTAGLHFT +L L + G+ + +VTLHVGAGTF PV+VE+ +
Sbjct: 173 SRYQTVYARERGAVAAPTAGLHFTEAMLDALRAKGVILAYVTLHVGAGTFQPVRVENIAE 232
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MHSEI I T A+ + + G ++++VGTTS+R LE+A + G + G T+IFI
Sbjct: 233 HKMHSEIYEIPPATVDAIAAAHAAGRKVLAVGTTSMRALESA-AQGGALVAGRGETDIFI 291
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HA+ H YRF+SYGD LL
Sbjct: 292 TPGYRFRVVDRLLTNFHLPKSTLLMLVSAFAGVEPIRNAYRHAVEHRYRFFSYGDAMLLE 351
Query: 358 QK 359
++
Sbjct: 352 KQ 353
>gi|238791401|ref|ZP_04635039.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
intermedia ATCC 29909]
gi|238729017|gb|EEQ20533.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
intermedia ATCC 29909]
Length = 361
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 148/363 (40%), Positives = 212/363 (58%), Gaps = 27/363 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P R RL+ +L P H + +DL L D +
Sbjct: 6 MRVADFSFELPESLIAHYPQPQRSGCRLL----SLDGPTGTLTHGIFTDLLDKLTPGDLL 61
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + ++ + + + + + SK K G L
Sbjct: 62 VFNNTRVIPARLFGRKASG-----GKLEVLVERVLDDHRVLAHVKASKAPKPGAEL--LL 114
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARKRPIDAR 175
D +S + AT++ + +T +F + + ER + + VG +PLPPYI RP +
Sbjct: 115 GDDES-IRATMLARHDT-----LFELR-FDDERDVFTILNAVGHMPLPPYI--DRPDEDA 165
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y+K G+VAAPTAGLHF +L+ L + GI++ FVTLHVGAGTF PV+V+
Sbjct: 166 DRELYQTVYSKRPGAVAAPTAGLHFDEPMLAALRAKGIEMAFVTLHVGAGTFQPVRVDTI 225
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFT 293
++HIMHSE + A+ + K+RG R+V+VGTTS+R LE+A ++ +I P+ G T
Sbjct: 226 EEHIMHSEYAEVPQDVVDAVLACKARGNRVVAVGTTSVRSLESAAKAAQNSLIAPFFGDT 285
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFI PGY ++ VD L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD
Sbjct: 286 RIFIYPGYHYQVVDALVTNFHLPESTLIMLVSAFAGYKNTMNAYQQAVAEQYRFFSYGDA 345
Query: 354 SLL 356
+
Sbjct: 346 MFI 348
>gi|284006391|emb|CBA71627.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Arsenophonus nasoniae]
Length = 352
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 145/362 (40%), Positives = 211/362 (58%), Gaps = 25/362 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F LP IA P+ R RL+ + + ++ + +D+ L S D +V
Sbjct: 1 MRVSDFAFKLPDELIAHYPLAKRSHCRLLSLDGSTG---ELAHGIFTDIVDKLESGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + P+ + R SK K G L
Sbjct: 58 FNNTQVIPARLYGRKIS-----GGKIEVLIERMLDPHRVLAHVRASKAPKVGAEL--LLG 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARKRPIDARD 176
D +S ++A ++ + +T +F I G + +R + + +G IPLPPYIAR P + D
Sbjct: 111 DDES-VKAIMLARHDT-----LFEI-GFQDKRDVLAILNDIGHIPLPPYIAR--PDEEID 161
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT Y + G+VAAPTAGLHF +LL+ L G+ + FVTLHVGAGTF PV+VE+
Sbjct: 162 RTLYQTVYGQRPGAVAAPTAGLHFDQSLLAALRQKGVAMAFVTLHVGAGTFQPVRVENVA 221
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTN 294
+H MH+E + A+ + K+RG R+++VGTTS+R LE+A ++ II P+ T
Sbjct: 222 EHTMHAEYVEVSQEVVDAILACKARGKRVIAVGTTSIRSLESAACACKEAIIAPFFDDTR 281
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PG+ F+ VD L++NFHLP+STL+MLVSAF G + T Y+ AI+ YRF+SYGD
Sbjct: 282 IFIYPGFHFQIVDALITNFHLPESTLIMLVSAFAGYQNTMNAYKKAIAEKYRFFSYGDAM 341
Query: 355 LL 356
+
Sbjct: 342 FI 343
>gi|163786383|ref|ZP_02180831.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queuosine
biosynthesis protein) [Flavobacteriales bacterium ALC-1]
gi|159878243|gb|EDP72299.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queuosine
biosynthesis protein) [Flavobacteriales bacterium ALC-1]
Length = 349
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 141/363 (38%), Positives = 199/363 (54%), Gaps = 22/363 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F FDLP +A P RD ARLMV++ I D+ + + D ++
Sbjct: 1 MKLSHFSFDLPEDLLAEHPSEHRDEARLMVLNREKQT---IEHKQFKDIIDYFDEGDVMI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREK-----EISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
NNTKV A+L G +EK E+ + W V P++ I+ G+ L
Sbjct: 58 LNNTKVFPARLYG-------NKEKTGARIEVFLLRELNQDQRLWDVLVDPARKIRIGNKL 110
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPID 173
+F +D L A VID + L F G + R+++ +G PLP YI KR ++
Sbjct: 111 -YFGED--ETLVAEVIDNTTSRGRTLRFLYDGSYTDFRRKLTDLGETPLPKYI--KRDVE 165
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT +AK +G+VAAPTAGLHF+ +LL RL G+++ VTLHVG GTF PV+VE
Sbjct: 166 PEDEERYQTIFAKNEGAVAAPTAGLHFSKHLLKRLEIKGVEMAEVTLHVGLGTFNPVEVE 225
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
D H M SE I A +N R+ +VGTTS+R +E++ + +G +N + G+T
Sbjct: 226 DLSKHKMDSEEIVITPRAADIVNKGIETKRRVCAVGTTSMRTIESSVSSNGRLNEFEGWT 285
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
N FI P Y F + +++NFH PKSTLLM+ SAF G + KK Y+ A+ Y+FYSYGD
Sbjct: 286 NKFIFPPYDFSIANCMITNFHTPKSTLLMMTSAFAGHDFMKKAYEEAVKEKYKFYSYGDA 345
Query: 354 SLL 356
L+
Sbjct: 346 MLI 348
>gi|284928957|ref|YP_003421479.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[cyanobacterium UCYN-A]
gi|284809416|gb|ADB95121.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[cyanobacterium UCYN-A]
Length = 361
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 143/368 (38%), Positives = 209/368 (56%), Gaps = 34/368 (9%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVS---DLPAFLNSNDAIVFN 62
+++ LP IA P+ PRDS+RL+V++ + H+ S +LP +L D +VFN
Sbjct: 10 YNYYLPSDLIAQSPLVPRDSSRLLVINS-------LDTHIHSFFHELPKWLLPGDLLVFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF----- 117
NT+VI A+L G + ++ L P SW +P K K G + F
Sbjct: 63 NTQVIPARLYGQKTTG-----AKVEVLLLEEKEPFSWLALVKPGKRFKIGSEILFKEKLD 117
Query: 118 -FSQDGQSRLEATVIDK-WNTGEILLVFSISGIEL-ERQISLVGTIPLPPYIARKRPIDA 174
+QD ++ATV+D+ TG +L F +S ++ + +G +PLPPYI+ +
Sbjct: 118 DLNQD--FLIKATVVDQDEETGGRILKFDVSSRKIFWEALERIGHLPLPPYISNCNAHSS 175
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
+ YQT YA+ G+VAAPTAGLHFT LL +L GI+ ++TLHVG GTF PV +D
Sbjct: 176 Q----YQTIYAQKPGAVAAPTAGLHFTQELLQKLQKKGIEQAYITLHVGLGTFRPVSTDD 231
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-----INPW 289
H MH E + + T Q ++ K GGR+++VGTT +R LE E + + +
Sbjct: 232 IKQHTMHQEWVEVPSETIQKIHKTKINGGRVIAVGTTVVRALEGMANETSMDTEYGVKSF 291
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
SG T+IFI PGY +R +D +++NFHLPKS+LLMLVSA G + ++Y+ AI YRFYS
Sbjct: 292 SGKTDIFIYPGYSWRLIDGMITNFHLPKSSLLMLVSALIGRKRLLELYKIAIEQKYRFYS 351
Query: 350 YGDTSLLF 357
+GD L+
Sbjct: 352 FGDGMLVL 359
>gi|81301157|ref|YP_401365.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus elongatus PCC 7942]
gi|123556309|sp|Q31KP1|QUEA_SYNE7 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|81170038|gb|ABB58378.1| S-adenosylmethionine [Synechococcus elongatus PCC 7942]
Length = 359
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 143/353 (40%), Positives = 192/353 (54%), Gaps = 14/353 (3%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
+D++LPP RIA V PRD ARL+V P+ + H DLP L D ++ N+T+
Sbjct: 14 YDYELPPDRIAQSAVEPRDHARLLVF-PDREQ--LWHRHFY-DLPQLLRPGDLLIVNDTR 69
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSR 125
VI A+L G + + L P W +P K +K G + F
Sbjct: 70 VIPARLYGQKI----ETGVPVEVLLVEEHGPGYWLTLVKPGKRLKPGSAIAFGPNPEDPL 125
Query: 126 LEATV-IDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTY 184
L A V TG L F Q++ +G +PLPPYI A D YQT Y
Sbjct: 126 LVADVEASDPATGGRWLRFRGEAEAFWSQLATLGEMPLPPYIH----TTASDPERYQTVY 181
Query: 185 AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEI 244
++ G+VAAPTAGLHFT LL+ L +GI VTLHVG GTF V VED H MHSE
Sbjct: 182 SRELGAVAAPTAGLHFTPELLTTLADMGIATAPVTLHVGIGTFRSVDVEDIRQHEMHSER 241
Query: 245 GFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFR 304
+ A T + + + K+ GGR+++VGTTS+R +E A G + P S N+FI PGYR++
Sbjct: 242 MMVPAATVEKIQATKAAGGRVIAVGTTSVRAIEGAAA-SGELKPGSDRVNLFIYPGYRWQ 300
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+D L++NFHLP+S+L+MLVSA G + Y AI+ YRFYS+GD L+
Sbjct: 301 IIDGLITNFHLPRSSLMMLVSALIGRDRLLSAYATAIAEQYRFYSFGDAMLIL 353
>gi|325577691|ref|ZP_08147966.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
parainfluenzae ATCC 33392]
gi|325160436|gb|EGC72562.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
parainfluenzae ATCC 33392]
Length = 363
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 143/367 (38%), Positives = 203/367 (55%), Gaps = 25/367 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R S RL+ ++ IS +D+ ++ D ++
Sbjct: 1 MRVSDFHFNLPDELIARYPKEDRSSCRLLQLNGENG---EISHRTFTDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + +S + + + R SK K+G L
Sbjct: 58 FNNTRVIPARMFGRKASG-----GKIEVLVERVLSEHHFLAHIRSSKAPKEGTELFL--- 109
Query: 121 DGQSRL-EATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARKRPIDAR 175
G+ +L E + G +F + + R + +G +PLPPYI RP +
Sbjct: 110 -GEDKLGENNGVKAIMVGRQDALFEVELADKSRNVLDVLQEIGHMPLPPYI--DRPDEEA 166
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y K+ G+VAAPTAGLHF LL +L G+ FVTLHVGAGTF PV+VE+
Sbjct: 167 DQECYQTVYNKVPGAVAAPTAGLHFDDELLQKLHEKGVNFEFVTLHVGAGTFQPVRVENI 226
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA---TTEDG---IINPW 289
+DHIMH+E + A+ K G R+++VGTTS+R +ETA E+G +I P+
Sbjct: 227 EDHIMHAEYVELSQEVCNAIIETKKAGKRVIAVGTTSVRSVETAALSAEENGNPDLIEPY 286
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
T+IFI PG FR VD L++NFHLP+STL+MLVSAF G T Y+ A+ + YRF+S
Sbjct: 287 FSDTSIFIYPGKSFRVVDALITNFHLPESTLIMLVSAFAGFSHTMNAYKSAVENRYRFFS 346
Query: 350 YGDTSLL 356
YGD +
Sbjct: 347 YGDAMFI 353
>gi|117622666|ref|YP_851579.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli APEC O1]
gi|166216720|sp|A1A875|QUEA_ECOK1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|115511790|gb|ABI99864.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Escherichia coli APEC O1]
gi|323952983|gb|EGB48851.1| tRNA ribosyltransferase-isomerase [Escherichia coli H252]
Length = 356
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 145/359 (40%), Positives = 207/359 (57%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R S RL+ +L P H +DL LN D +
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLL----SLDGPTGALTHGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + R SK K G
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEVLVERMLDEKRILAHIRASKAPKPG--AELLL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
D +S + AT+ + G + V + ++ +G IPLPPYI RP + D
Sbjct: 110 GDDES-INATMTARH--GALFEVEFNDDRSVLDILNSIGHIPLPPYI--DRPDEDADREL 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHI
Sbjct: 165 YQTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHI 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFI 297
MHSE + +A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 225 MHSEYAEVPQDVVEAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFI 284
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 285 YPGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFI 343
>gi|331005923|ref|ZP_08329271.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [gamma
proteobacterium IMCC1989]
gi|330420279|gb|EGG94597.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [gamma
proteobacterium IMCC1989]
Length = 349
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 139/363 (38%), Positives = 200/363 (55%), Gaps = 27/363 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F ++LP IA P R +RL+ + N + + D+ L + D +V
Sbjct: 1 MRRQDFSYELPEDLIAFTPAAERTGSRLLCLEGNTGA---LQHNEFPDIIHQLQAGDVMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV-----SPNSWSVYARPSKVIKKGDIL 115
FN+T+VI A++ G +KE + + V + W+ + R SK K I+
Sbjct: 58 FNDTQVIPARVFG---------QKETGGKVEILVERLIGTQQVWA-HIRASKSPKANTII 107
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
+ ++ TV + L + + G +PLPPYI R+ D
Sbjct: 108 TL-----DNGVDVTVKGRCGADNALFLVDFGENGALDVLQQAGHMPLPPYIEREDVPD-- 160
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y G+VAAPTAGLHF +L+ + GI + +VTLHVGAGTF PV+V++
Sbjct: 161 DQERYQTVYGCKPGAVAAPTAGLHFDESLMKAIADKGIIIVYVTLHVGAGTFQPVRVDNI 220
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFT 293
DHIMHSE+ + A A+N K+ G R+V+VGTTS+R LE+A + + P+ G T
Sbjct: 221 ADHIMHSEVIDVSADVCDAINQAKAEGRRVVAVGTTSMRCLESAAKYSHGDTLMPFQGET 280
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFITPGY+F+ VD L++NFHL +STLLMLVSAF G E T YQ A++ YRF+SYGD
Sbjct: 281 DIFITPGYQFQVVDALVTNFHLSESTLLMLVSAFAGYEHTMHAYQQAVAQRYRFFSYGDA 340
Query: 354 SLL 356
+
Sbjct: 341 MFI 343
>gi|301025763|ref|ZP_07189277.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 196-1]
gi|299879990|gb|EFI88201.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 196-1]
Length = 356
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 146/363 (40%), Positives = 208/363 (57%), Gaps = 27/363 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R S RL+ +L P H +DL LN D +
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLL----SLDGPTGALTHGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + R SK K G
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEVLVERMLDDKRILAHIRASKAPKPG--AELLL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARKRPIDAR 175
D +S + AT+I + +F + ER + + +G +PLPPYI RP +
Sbjct: 110 GDDES-INATMIARHGA-----LFEVE-FNDERSVLDILNSIGHMPLPPYI--DRPDEDA 160
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+
Sbjct: 161 DRELYQTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTI 220
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFT 293
+DHIMHSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T
Sbjct: 221 EDHIMHSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDT 280
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFI PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD
Sbjct: 281 QIFIYPGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDA 340
Query: 354 SLL 356
+
Sbjct: 341 MFI 343
>gi|37527761|ref|NP_931106.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Photorhabdus luminescens subsp. laumondii TTO1]
gi|46576913|sp|Q7N0I3|QUEA_PHOLL RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|36787197|emb|CAE16277.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queuosine
biosynthesis protein QueA) [Photorhabdus luminescens
subsp. laumondii TTO1]
Length = 355
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 142/361 (39%), Positives = 209/361 (57%), Gaps = 23/361 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R RL+ + ++ + +D+ LN+ D +V
Sbjct: 1 MRVSDFTFELPDEMIAHYPQPQRSGCRLLSLDGETGA---LTHGIFTDVLDKLNAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + + R SK K+G L
Sbjct: 58 FNNTRVIPARIFGRKATG-----GKLEVLVERVLDDKRVLAHVRASKAPKEGTEL--LLG 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISL---VGTIPLPPYIARKRPIDARDY 177
D +S L+AT++ + +T +F I + +S+ +G +PLPPYI RP + D
Sbjct: 111 DNES-LKATMLARHDT-----LFEIRFDDERDVLSILDDIGHMPLPPYI--NRPDEEADR 162
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT Y++ G+VAAPTAGLHF LL L G+++ FVTLHVGAGTF PV+VE +D
Sbjct: 163 ELYQTVYSERPGAVAAPTAGLHFDEPLLEALRKKGVEMVFVTLHVGAGTFQPVRVETIED 222
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNI 295
HIMH+E + A+ + K+RG ++V+VGTTS+R LE+A +D +I P+ T I
Sbjct: 223 HIMHAEYAEVPQDVVDAVLACKARGNKVVAVGTTSVRSLESAAKACQDELIAPFFNDTQI 282
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PG+ ++ VD L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD
Sbjct: 283 FIYPGFEYQVVDALITNFHLPESTLIMLVSAFAGYKNTMNAYQEAVAEKYRFFSYGDAMF 342
Query: 356 L 356
+
Sbjct: 343 I 343
>gi|253583344|ref|ZP_04860542.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
[Fusobacterium varium ATCC 27725]
gi|251833916|gb|EES62479.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
[Fusobacterium varium ATCC 27725]
Length = 343
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 141/360 (39%), Positives = 199/360 (55%), Gaps = 24/360 (6%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ ++D++LP I +P PRD ARLM+V+ I ++ +LN D +V
Sbjct: 4 LLSDYDYNLPEELIGQQPREPRDHARLMLVNRKNES---IEHKKFYEIIDYLNEGDILVR 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHM----RVSPNSWSVYARPSKVIKKGDILHF 117
N+TKVI A+L F H KE L + R+ ++W +P+K +K G L
Sbjct: 61 NSTKVIPARL----FGH-----KETGGVLEILLIKRIDLDTWECLLKPAKKLKIGQKL-- 109
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
F G + L +++ + G ++ F+ G E + +G +PLPPYI R
Sbjct: 110 FIGHG-NELIGELLEIKDDGNRIIKFTYEGA-FEEVLDRLGKMPLPPYIVEALKEKDR-- 165
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YA SVAAPTAGLHFT LL ++ GIK+ + L VG GTF PV+ E+ +
Sbjct: 166 --YQTVYAIKGESVAAPTAGLHFTKELLEKIEKKGIKIVDIFLEVGLGTFRPVQTENVLE 223
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH E+ I A +N K G RI+SVGTTS R LE+A E+G++ G T IFI
Sbjct: 224 HKMHEEVFEIPQEAADIINEGKRNGRRIISVGTTSTRALESAVDENGMVKAQKGSTEIFI 283
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+F+ +D L++NFHLPKSTLLMLVSA E K+Y A+ Y F+S+GD ++
Sbjct: 284 YPGYKFKVIDALITNFHLPKSTLLMLVSALSSREFMLKVYDIAVKEEYHFFSFGDAMFIY 343
>gi|330446694|ref|ZP_08310346.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328490885|dbj|GAA04843.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 350
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 146/369 (39%), Positives = 209/369 (56%), Gaps = 31/369 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDF+LP IA P R ++RL+ + N ++ D+ + D +V
Sbjct: 1 MQVSDFDFELPDELIARYPQPERTASRLLQMTGNTGE---LAHKCFKDVLDLVQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF--- 117
FNNT+VI A++ F H K I + + S + R SK K G+ L
Sbjct: 58 FNNTRVIPARM----FGHKASGGK-IEVLVERMLDDKSILAHVRASKPPKPGNELLLGEN 112
Query: 118 --FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
FS + +R +A ++N+ + +L + +VG +PLPPYI RP +
Sbjct: 113 GEFSAEMVARHDALFEIRFNSDKTVLEI----------LDIVGHMPLPPYI--DRPDEDA 160
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y G+VAAPTAGLHF L++ L + G+ FVTLHVGAGTF PV+V D
Sbjct: 161 DKERYQTVYNAKPGAVAAPTAGLHFDDKLMADLKAKGVNFAFVTLHVGAGTFQPVRVNDI 220
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-----INPWS 290
+DH MHSE + A+N ++ GGR+++VGTTS+R LE+A +D + P+
Sbjct: 221 NDHHMHSEYVEVPEEVVAAVNETRANGGRVIAVGTTSVRSLESA-AQDALKKGTEFKPFF 279
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G T+IFI PGY+F+ VD L++NFHLP+STL+MLVSAF G E T Y A+++ YRF+SY
Sbjct: 280 GDTDIFIFPGYQFQLVDALITNFHLPESTLIMLVSAFAGYENTMNAYHEAVANKYRFFSY 339
Query: 351 GDTSLLFQK 359
GD+ + +K
Sbjct: 340 GDSMFITRK 348
>gi|315180997|gb|ADT87911.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
furnissii NCTC 11218]
Length = 352
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 141/365 (38%), Positives = 211/365 (57%), Gaps = 22/365 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P+ R ++RL+ + N + D D+ + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPMAERTASRLLQLDGNTG---ELVDGTFKDVLNCVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + +S + R SK K G L
Sbjct: 58 FNNTRVIPARMFGRKASG-----GKLEVLVERMLDEHSILAHVRCSKPPKPGTELFL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G++ V+D + + F+ + L+ ++ +G +PLPPYI RP + D Y
Sbjct: 110 -GENDEFHAVMDARHDALFEIRFTAETVVLD-ILNQIGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G++ +VTLHVGAGTF PV+V++ +DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDQALLEQIKAKGVEFAYVTLHVGAGTFQPVRVDNINDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-----INPWSGFTNI 295
H+E + A+ + K+RGGRI++VGTTS+R LE+A +D + + P+ G T I
Sbjct: 226 HAEYVEVPQEVVDAIAATKARGGRIIAVGTTSVRSLESA-AQDALKKGTELVPFFGDTEI 284
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGY ++ VD L++NFHLP+STL+MLVSAF G E T Y HA+ YRF+SYGD ++
Sbjct: 285 FIYPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYEHTMAAYDHAVKQQYRFFSYGD-AM 343
Query: 356 LFQKR 360
+KR
Sbjct: 344 FIRKR 348
>gi|296134757|ref|YP_003641999.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Thiomonas
intermedia K12]
gi|295794879|gb|ADG29669.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Thiomonas
intermedia K12]
Length = 406
Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 153/395 (38%), Positives = 209/395 (52%), Gaps = 47/395 (11%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +FDF LPP IA P R +RL+ + P + D DLP L ++D +V
Sbjct: 20 LTADDFDFHLPPELIAQHPPARRSDSRLL----DAGSPPTLIDRGFRDLPGLLRADDLVV 75
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTL---HMRVSPNSWSVYARPSKVIKKGDILHF 117
FN+T+VI A+L G + + + +R W+ + R SK K G +L
Sbjct: 76 FNDTRVIPARLWGFKAAGEAGAALGGAVEVLVERVRADNRVWA-HVRASKSPKPGQVLWL 134
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISG--------IELE---RQISLV---GTIPLP 163
G +R +A D+ + L + G ELE ++L+ G +PLP
Sbjct: 135 ----GAARPDAAAGDEPHGSAPLFAVTTVGRAGPDGGLFELEFPAEPLALLQQYGAVPLP 190
Query: 164 PYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVG 223
PYI D D YQT YA+ GSVAAPTAGLHF +L + +IG + VTLHVG
Sbjct: 191 PYITHAPGSD--DVQRYQTVYAQHPGSVAAPTAGLHFDEAILEAIDAIGAQRAAVTLHVG 248
Query: 224 AGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGG------------RIVSVGTT 271
AGTF PV+V D H MHSE + T+QA+ V+ R R+V+VGTT
Sbjct: 249 AGTFQPVRVNDLRQHQMHSEWYTVPEATSQAIAKVRMRQAQARAAGQLHAAPRVVAVGTT 308
Query: 272 SLRLLETATT-------EDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLV 324
++R LE+A DG + P + T +F+TPGYRFR VD L++NFHLPKSTLLMLV
Sbjct: 309 AMRALESAALAAEAAGAPDGTVIPGARDTALFVTPGYRFRVVDALLTNFHLPKSTLLMLV 368
Query: 325 SAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
SAF G++ + Y HAI+ YRF+SYGD L ++
Sbjct: 369 SAFAGMDTIRAAYAHAIAQRYRFFSYGDAMWLTRQ 403
>gi|146293581|ref|YP_001184005.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
putrefaciens CN-32]
gi|166217770|sp|A4Y8C3|QUEA_SHEPC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|145565271|gb|ABP76206.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Shewanella
putrefaciens CN-32]
gi|319426880|gb|ADV54954.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Shewanella
putrefaciens 200]
Length = 345
Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 140/360 (38%), Positives = 200/360 (55%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R+++RL+ + N + D ++L +N D +V
Sbjct: 1 MRVADFSFDLPDELIARYPMAQRNASRLLTLDGNSGA---LGDKQFTELLEMINPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + + R SK K ++H
Sbjct: 58 FNNTRVIPARMFGQKAS-----GGKLEILVERMLDDKRILAHVRSSKSPKVDSLIHL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DG +++ LL LE VG +PLPPYI RP + D Y
Sbjct: 110 DGGYQMKMVARHDTLFELELLSELTILEVLE----AVGHMPLPPYI--DRPDEDADKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF +L L + G+ + FVTLHVGAGTF PV+V++ +H M
Sbjct: 164 QTVYNQNPGAVAAPTAGLHFDDAMLDALKAKGVNIAFVTLHVGAGTFQPVRVDNVLEHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFITP 299
HSE + + K+ G R+V+VGTTS+R LE+A G + +SG T+IFI P
Sbjct: 224 HSEWANVPQDVVDLIAQTKAAGKRVVAVGTTSVRSLESAARASLGELKAFSGDTDIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY+F+ VD +++NFHLP+STL+MLVSAF G + YQHAI+ YRF+SYGD + +K
Sbjct: 284 GYQFQVVDAMVTNFHLPESTLIMLVSAFAGFDHVMAAYQHAITQKYRFFSYGDAMFVTKK 343
>gi|91207391|sp|Q6LU70|QUEA_PHOPR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
Length = 351
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 147/365 (40%), Positives = 205/365 (56%), Gaps = 23/365 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + I D+ S D V
Sbjct: 1 MQVSDFHFDLPNELIARYPQPERTASRLLQLTGETGN---IQHKGFKDVLDLAESGDLFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + S + R SK K G+ L
Sbjct: 58 FNNTRVIPARIFGRKASG-----GKIEVLVERILDDKSILAHVRASKSPKPGNELLLGEN 112
Query: 121 DGQSRLEATVIDKWNT-GEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
D +A +I + +T EI + +E+ + VG +PLPPYI RP + D
Sbjct: 113 DD---YQAEMIARHDTLFEIRFNSDKTVLEI---LEEVGHMPLPPYI--DRPDEDADKER 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y G+VAAPTAGLHF L++ L + G+ FVTLHVGAGTF PV+V++ DDH
Sbjct: 165 YQTVYNAKPGAVAAPTAGLHFDDKLMAALKAKGVNFAFVTLHVGAGTFQPVRVDNIDDHH 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-----INPWSGFTN 294
MHSE + A+N+ K+ GGRI++VGTTS+R LE+A +D + + P+ G T
Sbjct: 225 MHSEYVEVPQDVVDAVNATKANGGRIIAVGTTSVRSLESA-AQDAVKKGTELVPFFGDTE 283
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PGY F+ VD+L++NFHLP+STL+MLVSAF G E T Y A+ + YRF+SYGD+
Sbjct: 284 IFIFPGYEFQLVDVLVTNFHLPESTLIMLVSAFAGYEHTMNAYLQAVDNKYRFFSYGDSM 343
Query: 355 LLFQK 359
+ ++
Sbjct: 344 FITRR 348
>gi|227358143|ref|ZP_03842484.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Proteus
mirabilis ATCC 29906]
gi|227161479|gb|EEI46516.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Proteus
mirabilis ATCC 29906]
Length = 357
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 143/362 (39%), Positives = 210/362 (58%), Gaps = 25/362 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP S IA P R RL+ + +S + +D+ LN+ D +V
Sbjct: 1 MRVSDFRFDLPESLIAHYPHPQRSGCRLLSLEGKTGN---LSHGVFTDVLDKLNAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + R SK K+G L +
Sbjct: 58 FNNTRVIPARIYGRKASG-----GKIEVLVERMLDEHRVLAHVRASKSPKEGASL-ILGE 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARKRPIDARD 176
D ++AT+I + +T +F I + ER + + +G +PLPPYI RP + D
Sbjct: 112 D--ESVQATMIARHDT-----LFEIR-FDDERDVLTILNSIGHMPLPPYI--DRPDERSD 161
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT Y + G+VAAPTAGLHF LL L + G+++ FVTLHVGAGTF PV+V++ +
Sbjct: 162 KELYQTVYNERPGAVAAPTAGLHFDEPLLEALRNKGVEMAFVTLHVGAGTFQPVRVDNIE 221
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTN 294
+H MHSE + A+ + K+RG R+++VGTTS+R LE+A +D +I P+ T
Sbjct: 222 EHTMHSEYAEVPQEVVDAVLACKARGNRVIAVGTTSVRSLESAAKAAKDALIAPFFDDTQ 281
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y A+ YRF+SYGD
Sbjct: 282 IFIYPGYQYQVIDALITNFHLPESTLIMLVSAFAGYKNTMNAYNVAVEQKYRFFSYGDAM 341
Query: 355 LL 356
+
Sbjct: 342 FI 343
>gi|330894474|gb|EGH27135.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. mori str. 301020]
Length = 354
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 153/367 (41%), Positives = 202/367 (55%), Gaps = 42/367 (11%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R S+RL+ L P ++ +DL L D +
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLL----TLDGPTGALAHRQFTDLLEHLRPGDLM 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDIL-HFF 118
VFNNT+VI A+L G +K L + V +V+ +L H
Sbjct: 57 VFNNTRVIPARLFG---------QKASGGKLEILVE-----------RVLDSHRVLAHVR 96
Query: 119 SQDGQSRLEATVIDKWNTGEILL----VFSISGIE-----LERQISLVGTIPLPPYIARK 169
S + +ID E++ +F + E LER VG +PLPPYI
Sbjct: 97 SSKSPKPGSSILIDGGGEAEMVARHDALFELRFAEEVLPLLER----VGHMPLPPYI--D 150
Query: 170 RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
RP + D YQT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF
Sbjct: 151 RPDEGADRERYQTVYAQRAGAVAAPTAGLHFDQPLLEAIAAKGVETAFVTLHVGAGTFQT 210
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPW 289
V+VE +DH MHSE + A+ + ++RGGR ++VGTTS+R LE+A DG + P+
Sbjct: 211 VRVEQIEDHHMHSEWLEVGQDVVDAVAACRARGGRGIAVGTTSVRSLESA-ARDGELKPF 269
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
SG T+IFI PG F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+S
Sbjct: 270 SGDTDIFIYPGRPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFS 329
Query: 350 YGDTSLL 356
YGD +
Sbjct: 330 YGDAMFI 336
>gi|161504410|ref|YP_001571522.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. arizonae serovar 62:z4,z23:-- str.
RSK2980]
gi|189038876|sp|A9MM58|QUEA_SALAR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|160865757|gb|ABX22380.1| hypothetical protein SARI_02521 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 356
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 147/363 (40%), Positives = 203/363 (55%), Gaps = 27/363 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P R RL+ +L P H +DL LN D +
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLL----SLEGPTGALTHGTFTDLLDKLNPGDVL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEVLVERMLDDKRILAHIRASKAPKPGTEL-LLG 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARKRPIDAR 175
D + AT+ + +F + ER + + +G +PLPPYI RP +
Sbjct: 111 DD--ENIHATMTARHGA-----LFEVE-FNDERPVLDILNAIGHMPLPPYI--DRPDEDA 160
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y++ G+VAAPTAGLHF LL+ L GI++ FVTLHVGAGTF PV+V+
Sbjct: 161 DRELYQTVYSEKPGAVAAPTAGLHFDKPLLAALREKGIEMAFVTLHVGAGTFQPVRVDTI 220
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFT 293
+DHIMHSE + A+ + K+RG R+++VGTTS+R LE+A + +I P+ G T
Sbjct: 221 EDHIMHSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKSDLIEPFFGDT 280
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFI PGY+++ +D L++NFHLP+STL+MLVSAF G E T Y+ A+ YRF+SYGD
Sbjct: 281 QIFIYPGYQYKVIDALVTNFHLPESTLIMLVSAFAGYEHTMNAYKAAVEQKYRFFSYGDA 340
Query: 354 SLL 356
+
Sbjct: 341 MFI 343
>gi|254282955|ref|ZP_04957923.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [gamma
proteobacterium NOR51-B]
gi|219679158|gb|EED35507.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [gamma
proteobacterium NOR51-B]
Length = 358
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 141/356 (39%), Positives = 200/356 (56%), Gaps = 12/356 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+ ++F FDLP IA P+ R S+RL+V+ S L +D+ +N D +V
Sbjct: 1 MLRQDFQFDLPGELIAQEPLAERSSSRLLVLE-GASGDLFHKQ--FTDIVDLINPEDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L GV+ + + + + S R SK + G ++ S
Sbjct: 58 FNNTKVLPARLFGVK-----QTGGRVEILIERLRADGSAVAQVRASKTPRDGAAIYITSD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + E V G + L+ G + + G +PLPPYI RP + D Y
Sbjct: 113 EESDKSEFYVRVVGREGSMYLLEPEVG-DWREIMRRFGHMPLPPYI--DRPDNESDQDRY 169
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA +G+VAAPTAGLHF NLL L + G+ VTLHVGAGTF PV+ E +DH M
Sbjct: 170 QTVYASKEGAVAAPTAGLHFDRNLLRDLSAKGVASVEVTLHVGAGTFQPVRAERIEDHHM 229
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + +A+++ + GGR+V+VGTT++R LE A G + P+ G T+IF+ PG
Sbjct: 230 HAETIDVGLTVCEAVDACRDGGGRVVAVGTTAVRSLEAAAAA-GSLVPFHGDTDIFLYPG 288
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
FR VD +++NFHLP+STL+MLVSAF G E Y+ A+S YRF+SYGD +
Sbjct: 289 RPFRVVDAMITNFHLPESTLIMLVSAFAGREHVLAAYRAAVSQRYRFFSYGDAMFI 344
>gi|251790678|ref|YP_003005399.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Dickeya
zeae Ech1591]
gi|247539299|gb|ACT07920.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Dickeya
zeae Ech1591]
Length = 357
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 143/362 (39%), Positives = 205/362 (56%), Gaps = 25/362 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAI 59
M V +F F+LP IA P R RL+ +L P I+ + +DL L D +
Sbjct: 3 MRVADFSFELPEYLIARYPQAKRSGCRLL----SLDGPTGAIAHGVFTDLLDKLQPGDLL 58
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + ++ + + + R SK K G L
Sbjct: 59 VFNNTRVIPARLFGRKASG-----GKLEVLVERMLDDKRVLAHVRASKAPKPGTAL-LLG 112
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISL---VGTIPLPPYIARKRPIDARD 176
+D ++AT++ + + +F I + +++ +G +PLPPYI RP +A D
Sbjct: 113 ED--ESVKATMLARHDA-----LFEIQFDDTRDVLTILNDIGHMPLPPYI--DRPDEAAD 163
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT Y++ G+VAAPTAGLHF LL+ L G+++ FVTLHVGAGTF PV+VE +
Sbjct: 164 RELYQTVYSQRPGAVAAPTAGLHFDEPLLAALKEKGVEMAFVTLHVGAGTFQPVRVESIE 223
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDG--IINPWSGFTN 294
DHIMH+E + A+ + K+RG R+++VGTTS+R LE+A + P+ G T
Sbjct: 224 DHIMHAEYAEVPQAVVDAVLACKARGNRVIAVGTTSVRSLESAAQASAGESLAPFFGDTR 283
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PGY +R VD L++NFHLP+STL+MLVSAF G T Y+ A++ YRF+SYGD
Sbjct: 284 IFIYPGYHYRVVDALVTNFHLPESTLIMLVSAFAGYRHTMAAYRQAVTEQYRFFSYGDAM 343
Query: 355 LL 356
+
Sbjct: 344 FI 345
>gi|303252317|ref|ZP_07338483.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 2 str. 4226]
gi|307247746|ref|ZP_07529784.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 2 str. S1536]
gi|302648776|gb|EFL78966.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 2 str. 4226]
gi|306855776|gb|EFM87941.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 2 str. S1536]
Length = 361
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 145/370 (39%), Positives = 202/370 (54%), Gaps = 34/370 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +F FDLP IA P R ++RL+ ++ D SDL +N D ++
Sbjct: 1 MLVSDFHFDLPDELIARYPTEERTASRLLHLNGETGH---FEDKQFSDLLDQINEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCH------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
FNNT+VI A+L G + + R E C H+R S K K+G
Sbjct: 58 FNNTRVIPARLYGRKASGGKLEVLVERVLDEHRCLAHVRAS-----------KAPKEGAE 106
Query: 115 LHFFSQDGQSRL-EATVIDKWNTGEILLVFSISGIELERQISLV---GTIPLPPYIARKR 170
L G+ +L E T +F + E + L+ G +PLPPYI R
Sbjct: 107 LVL----GEDKLGEGNGFKAIMTARHDALFELHFNEEQPVFDLLQQAGHMPLPPYI--DR 160
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
P + D YQT Y+K+ G+VAAPTAGLHF + L +L + G+ + FVTLHVGAGTF PV
Sbjct: 161 PDEDADQERYQTVYSKVLGAVAAPTAGLHFDNPTLEKLKAKGVNIAFVTLHVGAGTFQPV 220
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGII 286
+V++ DH MH+E + + + K+ G R+++VGTTS+R +E+A E +I
Sbjct: 221 RVDNILDHKMHAEYAEVSQAVVDQILATKATGKRVIAVGTTSVRSIESAAQAAEKEGKLI 280
Query: 287 NPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYR 346
P+ T+IF+ PG FR VD L++NFHLP+STL+MLVSAF G T K YQHA+ YR
Sbjct: 281 APFFSDTSIFLYPGKTFRIVDALVTNFHLPESTLIMLVSAFAGYRNTMKAYQHAVEAKYR 340
Query: 347 FYSYGDTSLL 356
F+SYGD +
Sbjct: 341 FFSYGDAMFI 350
>gi|8037781|gb|AAF71490.1|AF232005_1 QueA [Pseudomonas syringae pv. syringae]
Length = 354
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 152/367 (41%), Positives = 202/367 (55%), Gaps = 42/367 (11%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R S+RL+ L P ++ +DL L D +
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLL----TLDGPTGALAHRQFTDLLEHLRPGDLM 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDIL-HFF 118
VF NT+VI A+L G +K L + V +V+ +L H
Sbjct: 57 VFTNTRVIPARLFG---------QKASGGKLEILVE-----------RVLDSHRVLAHVR 96
Query: 119 SQDGQSRLEATVIDKWNTGEILL----VFSISGIE-----LERQISLVGTIPLPPYIARK 169
S + +ID E++ +F + E LER VG +PLPPYI
Sbjct: 97 SSKSPKPGSSILIDGGGEAEMVARHDALFELRFAEEVLPLLER----VGRMPLPPYI--D 150
Query: 170 RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
RP + D YQT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF P
Sbjct: 151 RPDEGADRERYQTVYAQRAGAVAAPTAGLHFDQPLLEAIAAKGVETAFVTLHVGAGTFQP 210
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPW 289
V+VE +DH MHSE + A+ + ++RGGR+++VGTTS+R LE+A DG + +
Sbjct: 211 VRVEQIEDHHMHSEWLEVGQDVVDAVAACRARGGRVIAVGTTSVRSLESA-ARDGELKSF 269
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
SG T+IFI PG F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+S
Sbjct: 270 SGDTDIFIYPGRPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFS 329
Query: 350 YGDTSLL 356
YGD +
Sbjct: 330 YGDAMFI 336
>gi|300715561|ref|YP_003740364.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein QueA) [Erwinia billingiae Eb661]
gi|299061397|emb|CAX58507.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein QueA) [Erwinia billingiae Eb661]
Length = 356
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 145/363 (39%), Positives = 209/363 (57%), Gaps = 27/363 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCP-LVISDHLVSDLPAFLNSNDAI 59
M V +F F+LP S IA P R RL+ +L+ P +S + +DL L D +
Sbjct: 1 MRVADFSFELPESLIAHYPQAQRSGCRLL----SLNGPDGELSHGIFTDLLDKLTPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A++ G + +I + + + + R SK K G
Sbjct: 57 VFNNTRVIPARVFGRKVSG-----GKIEVLVERMLDDHRVLAHVRASKAPKPG--AELLL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARKRPIDAR 175
D +S ++AT++ + + +F + + ER + + VG +PLPPYI RP +
Sbjct: 110 GDDES-VKATMVARHDA-----LFELQ-FDDERAVLDILNAVGHMPLPPYI--DRPDEDA 160
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y++ G+VAAPTAGLHF +L L GI+ FVTLHVGAGTF PV+V+
Sbjct: 161 DRELYQTVYSQRPGAVAAPTAGLHFDQPMLDALREKGIETAFVTLHVGAGTFQPVRVDSI 220
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFT 293
+DHIMH+E + A+ + K+RG R+V+VGTTS+R LE+A +D +I P+ T
Sbjct: 221 EDHIMHAEYAEVPQDVVDAVLACKARGNRVVAVGTTSVRSLESAAQAAQDALIAPFFDDT 280
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFI PGY+++ +D L++NFHLP+STL+MLVSAF G T YQ A++ YRF+SYGD
Sbjct: 281 KIFIFPGYQYQVIDALVTNFHLPESTLIMLVSAFAGYRNTMHAYQQAVAEQYRFFSYGDA 340
Query: 354 SLL 356
+
Sbjct: 341 MFI 343
>gi|212709159|ref|ZP_03317287.1| hypothetical protein PROVALCAL_00192 [Providencia alcalifaciens DSM
30120]
gi|212688071|gb|EEB47599.1| hypothetical protein PROVALCAL_00192 [Providencia alcalifaciens DSM
30120]
Length = 360
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 137/358 (38%), Positives = 206/358 (57%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R S RL+ + ++ + +D+ L D +V
Sbjct: 1 MRVSDFTFELPEELIAHYPQAERSSCRLLGLD---GATGQLTHGVFTDILEKLEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + + R SK K+G L +
Sbjct: 58 FNNTRVIPARLFGRKASG-----GKIEVLIERMLDEHRVLAHVRASKAPKEGAAL-LLGE 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D + AT++ + G + + ++ ++ +G +PLPPYI RP + D Y
Sbjct: 112 D--ESVNATMVARH--GALFELRFDDARDVLSILNQIGHMPLPPYI--DRPDEESDKELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL L G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSQRPGAVAAPTAGLHFDEPLLDALRQKGVEMAFVTLHVGAGTFQPVRVDSIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A +++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLACKARGNRVIAVGTTSVRSLESAAKASQNALIAPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY ++ +D L++NFHLP+STL+MLVSAF G + T + Y+ A+ YRF+SYGD +
Sbjct: 286 PGYEYQVIDALITNFHLPESTLIMLVSAFAGYQNTMRAYKEAVEQKYRFFSYGDAMFI 343
>gi|54297930|ref|YP_124299.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Legionella
pneumophila str. Paris]
gi|81601758|sp|Q5X3P9|QUEA_LEGPA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|53751715|emb|CAH13137.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Legionella
pneumophila str. Paris]
Length = 337
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 141/357 (39%), Positives = 205/357 (57%), Gaps = 20/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F FDLP IA P+ R +RL++ + + ++ FL D +V
Sbjct: 1 MNKQDFYFDLPSELIAQYPLANRSDSRLLIYNRQTE---EYGHYQFREIADFLQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N++KVI A+L G + ++ + ++ + + SK +K D+++
Sbjct: 58 MNDSKVIPARLYGHK-----ATGGKVELLVERITGDFTFLAHIKASKSLKSNDLIYL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D RLE V+++ + L + + ++ +G IPLPPYIAR+ ++ D Y
Sbjct: 110 DAGKRLE--VLERQDD----LFLCKASENILDLLNDLGHIPLPPYIARED--ESLDKERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GSVAAPTAGLHF +LS + + G+ + +VTLHVGAGTF PV+ E DH M
Sbjct: 162 QTVYAKCAGSVAAPTAGLHFDDAVLSSIRARGVNIAYVTLHVGAGTFRPVRCERIQDHKM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + KS G R+++VGTT+LR LE+A +I P S T+IFI PG
Sbjct: 222 HSEWFTVSPDLCAAVKAAKSMGNRVIAVGTTALRSLESAAMGGELI-PCSRDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ D L++NFHLP+STL+MLVSAF G +E +YQ AI YRF+SYGD SLL
Sbjct: 281 YQFKVCDGLITNFHLPESTLVMLVSAFIGHQECMALYQEAIDKRYRFFSYGDASLLL 337
>gi|222032200|emb|CAP74939.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli LF82]
gi|312944982|gb|ADR25809.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O83:H1 str. NRG 857C]
Length = 356
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 144/365 (39%), Positives = 208/365 (56%), Gaps = 31/365 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R S RL+ +L P ++ +DL LN D +
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLL----SLDGPTGALTHGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + R SK K G
Sbjct: 57 VFNNTRVIPARLFGCKASG-----GKIEVLVERMLDDKRILAHIRASKAPKPG--AELLL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISL------VGTIPLPPYIARKRPID 173
D +S + AT+ + ++ +E Q S+ +G +PLPPYI RP +
Sbjct: 110 GDDES-INATMTARHG--------ALFEVEFNDQRSVLDILNSIGHMPLPPYI--DRPDE 158
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+
Sbjct: 159 DADRELYQTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVD 218
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSG 291
+DHIMHSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+
Sbjct: 219 TIEDHIMHSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFD 278
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T IFI PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYG
Sbjct: 279 DTQIFIYPGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYG 338
Query: 352 DTSLL 356
D +
Sbjct: 339 DAMFI 343
>gi|296107617|ref|YP_003619318.1| S-adenosylmethionine-tRNA ribosyltransferase-isomerase [Legionella
pneumophila 2300/99 Alcoy]
gi|295649519|gb|ADG25366.1| S-adenosylmethionine-tRNA ribosyltransferase-isomerase [Legionella
pneumophila 2300/99 Alcoy]
Length = 337
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 141/357 (39%), Positives = 205/357 (57%), Gaps = 20/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F FDLP IA P+ R +RL++ + + ++ FL D +V
Sbjct: 1 MNKQDFYFDLPSELIAQYPLANRSDSRLLIYNRQTE---EYGHYQFREIADFLQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N++KVI A+L G + ++ + ++ + + SK +K D+++
Sbjct: 58 MNDSKVIPARLYGHK-----ATGGKVELLVERITGDFTFLAHIKASKSLKSNDLIYL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D RLE V+++ + L + + ++ +G IPLPPYIAR+ ++ D Y
Sbjct: 110 DAGKRLE--VLERQDD----LFLCKASENILDLLNDLGHIPLPPYIARED--ESLDKERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GSVAAPTAGLHF +LS + + G+ + +VTLHVGAGTF PV+ E DH M
Sbjct: 162 QTVYAKCAGSVAAPTAGLHFDDAVLSSIRARGVNIAYVTLHVGAGTFRPVRCERIQDHKM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + KS G R+++VGTT+LR LE+A +I P S T+IFI PG
Sbjct: 222 HSEWFTVSPDLCSAVKAAKSMGNRVIAVGTTALRSLESAAMGGELI-PCSRDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ D L++NFHLP+STL+MLVSAF G +E +YQ AI YRF+SYGD SLL
Sbjct: 281 YQFKVCDGLITNFHLPESTLVMLVSAFIGHQECMALYQEAIDKRYRFFSYGDASLLL 337
>gi|146310535|ref|YP_001175609.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterobacter sp. 638]
gi|167016406|sp|A4W778|QUEA_ENT38 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|145317411|gb|ABP59558.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Enterobacter sp. 638]
Length = 356
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 145/362 (40%), Positives = 204/362 (56%), Gaps = 25/362 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P R RL+ +L P H +DL LN D +
Sbjct: 1 MRVADFSFELPESLIAHYPQPERSGCRLL----SLDGPTGALTHGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + R SK K G
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEVLVERMLDDKRILAHIRASKAPKPG--AELLL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISL---VGTIPLPPYIARKRPIDARD 176
D +S + AT++ + + +F + + + + +G +PLPPYI RP + D
Sbjct: 110 GDDES-INATMVARHDA-----LFEVEFNDARPVLDILNAIGHMPLPPYI--DRPDEDAD 161
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT Y++ G+VAAPTAGLHF LL RL GI++ FVTLHVGAGTF PV+V+ +
Sbjct: 162 RELYQTVYSQKPGAVAAPTAGLHFDEPLLERLREKGIEMAFVTLHVGAGTFQPVRVDTIE 221
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTN 294
DHIMHSE + A+ + K+RG R+++VGTTS+R LE+A + +I P+ G T
Sbjct: 222 DHIMHSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKKDLIEPFFGDTK 281
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PGY++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD
Sbjct: 282 IFIYPGYQYTVIDALVTNFHLPESTLIMLVSAFAGYQNTMNAYKAAVEQNYRFFSYGDAM 341
Query: 355 LL 356
+
Sbjct: 342 FI 343
>gi|225010482|ref|ZP_03700953.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Flavobacteria bacterium MS024-3C]
gi|225005311|gb|EEG43262.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Flavobacteria bacterium MS024-3C]
Length = 349
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 139/363 (38%), Positives = 197/363 (54%), Gaps = 22/363 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F F+LP ++ P RD ++LMV+ I + D+ + + D +V
Sbjct: 1 MKLSAFGFELPEELLSEYPAENRDESKLMVID---RAKGTIEHKMFKDIIDYFDEGDVMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREK-----EISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
NNTKV A+L G +EK E+ + W V P++ I+ G+ L
Sbjct: 58 LNNTKVFPARLYG-------NKEKTGARIEVFLLRELNEEQRLWDVLVDPARKIRIGNKL 110
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPID 173
+F + L A VID + L F G + +++ +G PLP YI KR ++
Sbjct: 111 YFGEDES---LVAEVIDNTTSRGRTLRFLYDGSYTDFRKKLRDLGETPLPKYI--KREVE 165
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
A D YQT YAK +G+VAAPTAG+HF+ +LL RL G+ VTLHVG GTF PV+VE
Sbjct: 166 AEDEERYQTIYAKHEGAVAAPTAGMHFSKHLLKRLEIKGVDFAEVTLHVGLGTFNPVEVE 225
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
D H M SE I+ +N K++ RI +VGTT +R LETA + +N G+T
Sbjct: 226 DLSKHKMDSEELIIEEKATVTINHAKTQKKRICAVGTTVMRSLETAVSSQHTLNSHQGWT 285
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
N FI P + F + +++NFHLPKSTLLM++SAF G + K+ Y+ AI Y+FYSYGD
Sbjct: 286 NKFIFPPHEFSIANCMITNFHLPKSTLLMMISAFMGHDLMKEAYKIAIEEKYKFYSYGDA 345
Query: 354 SLL 356
L+
Sbjct: 346 MLI 348
>gi|268592080|ref|ZP_06126301.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Providencia
rettgeri DSM 1131]
gi|291312475|gb|EFE52928.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Providencia
rettgeri DSM 1131]
Length = 356
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 139/362 (38%), Positives = 207/362 (57%), Gaps = 25/362 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R + RL+ + ++ + +D+ L D +V
Sbjct: 1 MRVSDFTFELPEELIAHYPQAERSACRLLSLDGGSGQ---LTHGVFTDILEKLEHGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + + R SK K+G L +
Sbjct: 58 FNNTRVIPARLFGRKVSG-----GKIEVLIERMLDEHRVLAHVRASKAPKEGAEL-LLGE 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARKRPIDARD 176
D ++AT++ + +F + + ER + + +G +PLPPYI RP + D
Sbjct: 112 D--ESVKATMVARHGA-----LFELR-FDDERDVLSILNQIGHMPLPPYI--DRPDEESD 161
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT Y++ G+VAAPTAGLHF LL L G+++ FVTLHVGAGTF PV+V+ +
Sbjct: 162 KELYQTVYSEKPGAVAAPTAGLHFDEPLLEALRQKGVEMAFVTLHVGAGTFQPVRVDTIE 221
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTN 294
DHIMHSE + A+ + K+RG R+++VGTTS+R LE+A ++D +I P+ T
Sbjct: 222 DHIMHSEYAEVPQEVVDAVLACKARGNRVIAVGTTSVRSLESAAKASQDALIAPFFDDTQ 281
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PGY ++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD
Sbjct: 282 IFIYPGYEYQVIDALITNFHLPESTLIMLVSAFAGYKNTMNAYEEAVKQKYRFFSYGDAM 341
Query: 355 LL 356
+
Sbjct: 342 FI 343
>gi|157369303|ref|YP_001477292.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Serratia
proteamaculans 568]
gi|167016408|sp|A8GAM4|QUEA_SERP5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|157321067|gb|ABV40164.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Serratia
proteamaculans 568]
Length = 356
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 148/363 (40%), Positives = 211/363 (58%), Gaps = 27/363 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLV-SDLPAFLNSNDAI 59
M V +F F+LP S IA P R RL+ L P H V +DL L + D +
Sbjct: 1 MRVADFSFELPESLIAHYPQPERSGCRLL----QLDGPSGELKHGVFTDLLDNLEAGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A++ G + +I + + + + R SK K G L
Sbjct: 57 VFNNTRVIPARMFGRKVSG-----GKIEVLVERVLDDHRVLAHVRASKAPKPGTDL--LL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARKRPIDAR 175
D +S + AT++ + +T +F + ER + + VG +PLPPYI RP +
Sbjct: 110 GDDES-IAATMVARHDT-----LFELR-FNDERDVFTILNAVGHMPLPPYI--DRPDEDA 160
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y++ G+VAAPTAGLHF LL+ L GI++ FVTLHVGAGTF PV+VE
Sbjct: 161 DRELYQTVYSEKPGAVAAPTAGLHFDEPLLAALREKGIEMAFVTLHVGAGTFQPVRVETI 220
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFT 293
++H+MH+E + A+ + K+RG R+V+VGTTS+R LE+A +++ +I P+ T
Sbjct: 221 EEHVMHAEYAEVPQEVVDAVLACKARGKRVVAVGTTSVRSLESAANASKEALIAPFFDDT 280
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PGY ++ VD L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD
Sbjct: 281 SIFIFPGYHYQVVDALVTNFHLPESTLIMLVSAFAGYKNTMHAYQQAVAEQYRFFSYGDA 340
Query: 354 SLL 356
+
Sbjct: 341 MFI 343
>gi|260773399|ref|ZP_05882315.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
metschnikovii CIP 69.14]
gi|260612538|gb|EEX37741.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
metschnikovii CIP 69.14]
Length = 350
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 142/362 (39%), Positives = 212/362 (58%), Gaps = 23/362 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R +RL+ ++ + D +D+ ++ D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPKAQRTDSRLLRLNGTTGERV---DGTFTDVLHYIEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + +S + R SK K G L+ Q
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKLEVLVERMLDEHSILAHVRCSKPPKPGTELYLGEQ 112
Query: 121 DGQSRLEATVIDKWNT-GEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
D + AT++ + + EI + +E+ ++ +G +PLPPYI RP + D
Sbjct: 113 D---QYLATMVARHDALFEIRFNAQQTVLEI---LNHIGHMPLPPYI--DRPDEETDKER 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y + G+VAAPTAGLHF LL ++ + G++ +VTLHVGAGTF PV+VE+ DH
Sbjct: 165 YQTVYNQKPGAVAAPTAGLHFDQALLDQIQAKGVEFAYVTLHVGAGTFQPVRVENIHDHH 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-----INPWSGFTN 294
MH+E + A+ + K+RGGR+++VGTTS+R LE+A +D + + P+ G T+
Sbjct: 225 MHAEYVEVPEEVVAAIAATKARGGRVIAVGTTSVRSLESA-AQDALAKGTALAPFFGDTD 283
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PGY+++ +D L++NFHLP+STL+MLVSAF G E T YQHA+ YRF+SYGD
Sbjct: 284 IFIFPGYQYQLIDALITNFHLPESTLIMLVSAFAGYEHTMAAYQHAVEQKYRFFSYGDAM 343
Query: 355 LL 356
+
Sbjct: 344 FI 345
>gi|329123730|ref|ZP_08252290.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
aegyptius ATCC 11116]
gi|327469929|gb|EGF15394.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
aegyptius ATCC 11116]
Length = 363
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 140/364 (38%), Positives = 206/364 (56%), Gaps = 19/364 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R S RL+ ++ I SD+ ++ D ++
Sbjct: 1 MRVSDFNFDLPDELIARYPKTDRVSCRLLQLNGENG---EIFHRTFSDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + + R SK K+G L F +
Sbjct: 58 FNNTRVIPARMFGRKASG-----GKIEVLVERMLDEHRFLAHIRSSKSPKEGAEL-FLGE 111
Query: 121 D--GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
D G++ V+ ++ + S L + +G +PLP YI RP + D
Sbjct: 112 DKLGENNGIKAVMKARHSSLFEVELSDKSTALLDVLQTIGHMPLPLYI--DRPDEEADKE 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y+K+ G+VAAPTAGLHF LL +L G+ FVTLHVGAGTF PV+VE+ +DH
Sbjct: 170 CYQTVYSKVPGAVAAPTAGLHFDDPLLEKLKKKGVNFEFVTLHVGAGTFQPVRVENIEDH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTED----GIINPWSGF 292
+MH+E + A+ + K G R+++VGTTS+R +E+A + E+ +I P+
Sbjct: 230 VMHAEYVEVSQEVCNAIIATKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSD 289
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + T Y+HA+ YRF+SYGD
Sbjct: 290 TSIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKHAVQEKYRFFSYGD 349
Query: 353 TSLL 356
+
Sbjct: 350 AMFI 353
>gi|91209473|ref|YP_539459.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli UTI89]
gi|218557314|ref|YP_002390227.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli S88]
gi|237707601|ref|ZP_04538082.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
sp. 3_2_53FAA]
gi|122424776|sp|Q1RFD6|QUEA_ECOUT RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|226736736|sp|B7MD63|QUEA_ECO45 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|91071047|gb|ABE05928.1| probable S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Escherichia coli UTI89]
gi|218364083|emb|CAR01748.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli S88]
gi|226898811|gb|EEH85070.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
sp. 3_2_53FAA]
gi|307628126|gb|ADN72430.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli UM146]
gi|315289880|gb|EFU49270.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 110-3]
gi|323958598|gb|EGB54301.1| tRNA ribosyltransferase-isomerase [Escherichia coli H263]
Length = 356
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 145/359 (40%), Positives = 206/359 (57%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R S RL+ +L P H +DL LN D +
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLL----SLDGPTGALTHGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + R SK K G
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEVLVERMLDEKRILAHIRASKAPKPG--AELLL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
D +S + AT+ + G + V + ++ +G IPLPPYI RP + D
Sbjct: 110 GDDES-INATMTARH--GALFEVEFNDDRSVLDILNSIGHIPLPPYI--DRPDEDADREL 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHI
Sbjct: 165 YQTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHI 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFI 297
MHSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 225 MHSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFI 284
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 285 YPGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFI 343
>gi|90414611|ref|ZP_01222584.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Photobacterium profundum 3TCK]
gi|90324327|gb|EAS40896.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Photobacterium profundum 3TCK]
Length = 351
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 146/365 (40%), Positives = 204/365 (55%), Gaps = 23/365 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + I D+ D V
Sbjct: 1 MQVSDFHFDLPDELIARYPQPERTASRLLQLTGETGN---IQHKGFKDVLELAEPGDLFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + S + R SK K G+ L
Sbjct: 58 FNNTRVIPARIFGRKASG-----GKIEVLVERMLDDKSILAHVRASKSPKPGNELLLGEN 112
Query: 121 DGQSRLEATVIDKWNT-GEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
D +A +I + +T EI + +E+ + VG +PLPPYI RP + D
Sbjct: 113 DD---YQAEMIARHDTLFEIRFNSDKTVLEI---LEEVGHMPLPPYI--DRPDEDADKER 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y G+VAAPTAGLHF L++ L + G+ FVTLHVGAGTF PV+V++ DDH
Sbjct: 165 YQTVYNAKPGAVAAPTAGLHFDDELMAALKAKGVNFAFVTLHVGAGTFQPVRVDNIDDHH 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-----INPWSGFTN 294
MHSE + A+N+ K+ GGRI++VGTTS+R LE+A +D + + P+ G T
Sbjct: 225 MHSEYVEVPQDVVDAVNATKANGGRIIAVGTTSVRSLESA-AQDAVKKGTELVPFFGDTE 283
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PGY F+ VD+L++NFHLP+STL+MLVSAF G E T Y A+ + YRF+SYGD+
Sbjct: 284 IFIFPGYEFQLVDVLVTNFHLPESTLIMLVSAFAGYEHTMNAYLQAVDNQYRFFSYGDSM 343
Query: 355 LLFQK 359
+ ++
Sbjct: 344 FITRR 348
>gi|254167112|ref|ZP_04873965.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Aciduliprofundum boonei T469]
gi|197623968|gb|EDY36530.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Aciduliprofundum boonei T469]
Length = 332
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 136/357 (38%), Positives = 208/357 (58%), Gaps = 30/357 (8%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +DF+LP IA PV PRD ARLMV+ I +LP +++ D ++ N
Sbjct: 4 LRNYDFELPEELIAQEPVEPRDHARLMVLRKG------IEHRYFYNLPEYMDKGDVLILN 57
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKVI A++ G++ ++ + ++S N + + K I G +L F G
Sbjct: 58 DTKVIKARIRGIKDTG-----GKVEILILEKLSENYYRCLVKGKK-IHPGSVLIFEDIKG 111
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
V+ + N G + FS ++L R+ G +PLPPYI + P DA + YQT
Sbjct: 112 -------VVREKNEGICEIEFSGDIMDLARR---RGEVPLPPYI-KNPPNDAEE--KYQT 158
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
+A+ +G+VAAPTAGLHFT LL + G+K+ ++TLHV TF PVK ED +H +
Sbjct: 159 VFARREGAVAAPTAGLHFTPQLLKEIEKKGVKIGYITLHVSYSTFKPVKTEDIREHKVDE 218
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E + ++ +N R GR+ +VGTT R LE+ ++++GII P G+TNIFI GY+
Sbjct: 219 EYYIVGEEVSKLIN---EREGRLFAVGTTVTRALES-SSKNGIIYPSHGYTNIFIYSGYK 274
Query: 303 FRA-VDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F++ +D L++NFH+P+S+L++LV+AF G E K Y+ AI YRFYS+GD L+F+
Sbjct: 275 FQSGIDALITNFHVPRSSLILLVTAFGGYERIMKAYRIAIEKKYRFYSFGDAMLIFK 331
>gi|256420574|ref|YP_003121227.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Chitinophaga pinensis DSM 2588]
gi|256035482|gb|ACU59026.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Chitinophaga pinensis DSM 2588]
Length = 349
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 140/363 (38%), Positives = 198/363 (54%), Gaps = 22/363 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F FDLP + IA P RD ARLMVV+ I + D+ + N D +V
Sbjct: 1 MKLSQFRFDLPLNLIAQHPSKTRDEARLMVVN---RATGKIEHKVFRDIINYFNDKDVMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREK-----EISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
NNTKV A+L G R+EK E+ + W V P++ I+ G+ L
Sbjct: 58 VNNTKVFPARLYG-------RKEKTGAKIEVFLLRELNKQNRLWDVIVDPARKIRVGNKL 110
Query: 116 HFFSQDGQSRLEATVIDKWNTG--EILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
+F D +S L A VID + I +F E ++ + +G PLP YI RK +
Sbjct: 111 YF--GDDES-LVAEVIDNTTSRGRTIRFLFEGDDNEFKQVLDTLGETPLPKYIKRKP--E 165
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT YAK +G+VAAPTAGLHF+ L+ RL G+K VTLH G GTF P++VE
Sbjct: 166 EEDKERYQTVYAKHEGAVAAPTAGLHFSRELIKRLEIKGVKFAEVTLHTGLGTFRPIEVE 225
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
D H M +E ID + +N K ++ ++GTT++R +E++ T ++ G+T
Sbjct: 226 DLSKHKMDAEYFNIDEYAVKVVNKAKEENRKVCAIGTTTVRAVESSVTAQNLLKAAEGWT 285
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
N FI P Y F + L++NFHLPK++LL++V AF G + + YQ AI YRF+SYGD
Sbjct: 286 NTFIHPPYDFAIPNALVTNFHLPKTSLLIMVCAFAGYDLVMEAYQQAIKEKYRFFSYGDA 345
Query: 354 SLL 356
L+
Sbjct: 346 MLI 348
>gi|294493624|gb|ADE92380.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli IHE3034]
Length = 356
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 147/360 (40%), Positives = 210/360 (58%), Gaps = 21/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R S RL+ +L P H +DL LN D +
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLL----SLDGPTGALTHGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + R SK K G
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEVLVERMLDEKRILAHIRASKAPKPG--AELLL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLV-FSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
D +S + AT+ + G + V F+ + L+ ++ +G IPLPPYI RP + D
Sbjct: 110 GDDES-INATMTARH--GALFEVEFNDDRLVLD-ILNSIGHIPLPPYI--DRPDEDADRE 163
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DH
Sbjct: 164 LYQTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDH 223
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIF 296
IMHSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IF
Sbjct: 224 IMHSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIF 283
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 284 IYPGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFI 343
>gi|258619938|ref|ZP_05714978.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase [Vibrio
mimicus VM573]
gi|258587671|gb|EEW12380.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase [Vibrio
mimicus VM573]
Length = 352
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 140/366 (38%), Positives = 208/366 (56%), Gaps = 31/366 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N S LV D D+ + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPKAERTASRLLQLDGN-SGQLV--DGTFKDVLGLVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + ++ + R SK K G L+
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGEN 112
Query: 121 DG-----QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
D Q+R +A ++ ++L ++ +G +PLPPYI RP +
Sbjct: 113 DEFHAVMQARHDALFEIRFTAETVVLDI----------LNQIGHMPLPPYI--DRPDEDA 160
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y + G+VAAPTAGLHF LL ++ + G+++ +VTLHVGAGTF PV+VE+
Sbjct: 161 DKERYQTVYNQKPGAVAAPTAGLHFDQVLLEQIQAKGVELAYVTLHVGAGTFQPVRVENI 220
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-----INPWS 290
DH MH+E + A+ + K+RGGR+++VGTTS+R LE+A +D + + P+
Sbjct: 221 HDHHMHAEYVEVPQEVVDAVAATKARGGRVIAVGTTSVRSLESA-AQDALKKGTELKPFF 279
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G T IFI PGY+++ VD L++NFHLP+STL+MLVSAF G T Y+HA+ YRF+SY
Sbjct: 280 GDTEIFIFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYGHTMAAYEHAVQQQYRFFSY 339
Query: 351 GDTSLL 356
GD +
Sbjct: 340 GDAMFI 345
>gi|257467859|ref|ZP_05631955.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium ulcerans ATCC 49185]
gi|317062148|ref|ZP_07926633.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium ulcerans ATCC 49185]
gi|313687824|gb|EFS24659.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium ulcerans ATCC 49185]
Length = 343
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 141/360 (39%), Positives = 197/360 (54%), Gaps = 24/360 (6%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ ++D+ LP I +P PRD ARLM+V+ I D+ +LN D +V
Sbjct: 4 LLSDYDYHLPEKLIGQQPREPRDHARLMLVNRKNES---IEHKKFYDIIDYLNEGDILVR 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHM----RVSPNSWSVYARPSKVIKKGDILHF 117
N+TKVI A+L F H KE L + R+ ++W +P+K +K G L
Sbjct: 61 NSTKVIPARL----FGH-----KETGGVLEILLIKRIDLDTWECLLKPAKKLKVGQKL-- 109
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
F G + L +++ + G ++ F+ G E + +G +PLPPYI R
Sbjct: 110 FIGHG-NELIGELLEIKDDGNRIIKFTYEGA-FEEVLDRLGKMPLPPYIVEALKEKDR-- 165
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YA SVAAPTAGLHFT LL ++ GIK+ + L VG GTF PV+ E+ +
Sbjct: 166 --YQTVYAIKGESVAAPTAGLHFTKELLEKIEKKGIKIVDIFLEVGLGTFRPVQTENVLE 223
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH E+ I A +N K G RI+SVGTTS R LE+A E+G++ G T IFI
Sbjct: 224 HKMHEEVYEIPQEAADIINEGKKNGKRIISVGTTSTRALESAVDENGLVKALKGSTEIFI 283
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG+ F+ +D L++NFHLPKSTLLMLVSA E K+Y A+ Y F+S+GD ++
Sbjct: 284 YPGFEFKVIDALITNFHLPKSTLLMLVSALSSREFMLKVYDIAVKEEYHFFSFGDAMFIY 343
>gi|93006388|ref|YP_580825.1| queuosine biosynthesis protein [Psychrobacter cryohalolentis K5]
gi|122415204|sp|Q1QAG2|QUEA_PSYCK RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|92394066|gb|ABE75341.1| Queuosine biosynthesis protein [Psychrobacter cryohalolentis K5]
Length = 405
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 145/386 (37%), Positives = 213/386 (55%), Gaps = 36/386 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLV-ISDHLVSDLPAFLNSNDAI 59
+ V ++D++LP IA P+ R +++L+ + N + V + D L S+LP LN+ D I
Sbjct: 27 LSVDDYDYELPDQLIARYPLAQRSASKLLYLRANNANSQVEVEDKLFSELPELLNAGDLI 86
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF- 118
VFN+TKV+ A+L G + +I + V+ + + A + DI+
Sbjct: 87 VFNDTKVMKARLFGQK-----DTGGKIEVLIERLVALSDLNS-ADLDTITSNSDIIDMTV 140
Query: 119 ---SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQ---------------ISLVGTI 160
++A+ K G +L ++G+ + RQ + L G +
Sbjct: 141 IAEKHIALCHVKASKALKLGQGLVLADGHMTGVMIGRQENLFILAFDTPILPDLELYGEL 200
Query: 161 PLPPYIARKRPIDARDYVDYQTTY---AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYF 217
P+PPY +R DA D YQT + AK+ SVAAPTA LHF +L +L + GI+ F
Sbjct: 201 PIPPYF--ERHADATDNTRYQTVFHDPAKL-ASVAAPTASLHFDDIVLEKLAAKGIQTAF 257
Query: 218 VTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE 277
VTLHVGAGTF PVK E+ +H MHSE + TA +N + G +++++GTT R+LE
Sbjct: 258 VTLHVGAGTFAPVKTENLLNHTMHSEYAHLPQATADLINQTHANGKQVIAIGTTVTRVLE 317
Query: 278 TATTEDGI----INPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEET 333
TA + + ++ W+G T IFI PG+ F VD L++NFHLPKSTLLMLVSAF +
Sbjct: 318 TAYQQTAVDRQPLSGWAGDTEIFIYPGFEFGVVDKLLTNFHLPKSTLLMLVSAFATKKSI 377
Query: 334 KKMYQHAISHAYRFYSYGDTSLLFQK 359
++ YQHAI YRF+SYGD LL +K
Sbjct: 378 EEAYQHAIESEYRFFSYGDAMLLDKK 403
>gi|225848048|ref|YP_002728211.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sulfurihydrogenibium azorense Az-Fu1]
gi|225643657|gb|ACN98707.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sulfurihydrogenibium azorense Az-Fu1]
Length = 336
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 141/362 (38%), Positives = 193/362 (53%), Gaps = 33/362 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+ LP IA PV PRDS RLMV++ I + D+ +L D +V
Sbjct: 1 MKLSDFDYHLPKELIAKYPVEPRDSCRLMVLNREKKS---IEHRVFRDIVDYLQEGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREK---EISCTLHMRVSPNSWSVYARPSKVIKKGD---I 114
N+TKVI A+L I ++EK I L V N W + + +K D +
Sbjct: 58 LNDTKVIPARL-------IGKKEKTGANIEVFLLKPVEDNIWEALIKNVRRLKPKDKIVV 110
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
F + R E VI K ++ +I + + G IPLPPYI +RP +
Sbjct: 111 AQDFFVEFLERQEDKVIVKLHSKDI-----------KEDLEKYGHIPLPPYI--ERPDEE 157
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
+D YQT +AK +GSVA+PTAGLHFT LL ++ G+ + ++TLHVG GTF PVK ED
Sbjct: 158 KDKQLYQTVFAKKEGSVASPTAGLHFTEELLKKVKDKGVNITYITLHVGLGTFKPVKEED 217
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
H MH E I + + K G +++VGTT +R LE+ + GFT+
Sbjct: 218 ITKHKMHEEFYSIPKESLDLIEKTKESGKSVIAVGTTVVRTLESFV----LTGKTEGFTD 273
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI P + F+ VD L++NFHLPKSTLLMLVSAF + K Y A+ YRF+SYGD
Sbjct: 274 IFIYPPFEFKIVDKLITNFHLPKSTLLMLVSAFASKDFILKAYNEAVKQKYRFFSYGDAM 333
Query: 355 LL 356
+
Sbjct: 334 FI 335
>gi|269138314|ref|YP_003295014.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Edwardsiella tarda EIB202]
gi|267983974|gb|ACY83803.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Edwardsiella tarda EIB202]
gi|304558345|gb|ADM41009.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Edwardsiella tarda FL6-60]
Length = 357
Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 146/361 (40%), Positives = 207/361 (57%), Gaps = 29/361 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLV-SDLPAFLNSNDAI 59
M V +F F+LP IA P R RL+ +L P +H V +D+ LN D +
Sbjct: 1 MRVSDFTFELPDELIARYPQEQRSGCRLL----SLDGPTGAREHGVFTDIVDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKG-DILHFF 118
VFNNT+VI A+L G + ++ + + + R SK K G ++L
Sbjct: 57 VFNNTRVIPARLFGRKTSG-----GKVEVLVERVLDRARVLAHVRASKAPKPGAELLLGD 111
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARKRPIDA 174
++D + AT++ + + +F + G + R + + G +PLPPYI RP D
Sbjct: 112 NED----IRATMLARHDA-----LFEL-GFDDPRDVLAILNAAGHMPLPPYI--DRPDDE 159
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D YQT Y+ G+VAAPTAGLHF LL RL GI++ FVTLHVGAGTF PV+VE
Sbjct: 160 ADRELYQTVYSSRPGAVAAPTAGLHFDQPLLDRLRDKGIEMAFVTLHVGAGTFQPVRVES 219
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--ATTEDGIINPWSGF 292
+DHIMHSE + A+ + K+RG R+++VGTTS+R LE+ A ++ +I P+
Sbjct: 220 IEDHIMHSEYAEVPQEVVDAVLACKARGNRVIAVGTTSVRSLESAAAASKQALIAPFFDD 279
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T IFI PGY ++ +D L++NFHLP+STL+MLVSAF G T Y+ A++ YRF+SYGD
Sbjct: 280 TQIFIYPGYHYQVIDALITNFHLPESTLIMLVSAFAGYRHTLDAYRDAVARQYRFFSYGD 339
Query: 353 T 353
Sbjct: 340 A 340
>gi|149191582|ref|ZP_01869828.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
shilonii AK1]
gi|148834600|gb|EDL51591.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
shilonii AK1]
Length = 350
Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 141/364 (38%), Positives = 199/364 (54%), Gaps = 21/364 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R S+RL+ + N + D +D+ + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPKAERSSSRLLQLTGNTGE---VVDGSFTDIVDQVQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARMFGRKASG-----GKIEVLVERMLDDKRVLAHVRSSKAPKPGTELFLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D L D E+ ++ I ++ +G +PLPPYI RP + D Y
Sbjct: 113 DEYQALMVARHDALFEIEMQSEKTVLDI-----LNDIGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF +L ++ + G+ +VTLHVGAGTF PV+VE+ +DH M
Sbjct: 166 QTVYNEKPGAVAAPTAGLHFDDAVLEKIKAKGVNFAYVTLHVGAGTFQPVRVENINDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN-----PWSGFTNI 295
H+E + A+N K+ GGRI++VGTTS+R LE+A +D + N P+ G T I
Sbjct: 226 HAEYVEVPQEVVDAINETKANGGRIIAVGTTSVRSLESA-AQDALKNGTELVPFFGDTEI 284
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGY ++ VD L++NFHLP+STL+MLVSAF G + Y HA+ YRF+SYGD
Sbjct: 285 FIFPGYEYQLVDCLVTNFHLPESTLIMLVSAFAGYDNVMSAYHHAVEQKYRFFSYGDAMF 344
Query: 356 LFQK 359
+ +K
Sbjct: 345 ITKK 348
>gi|197283988|ref|YP_002149860.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Proteus
mirabilis HI4320]
gi|238693147|sp|B4EU12|QUEA_PROMH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|194681475|emb|CAR40314.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Proteus
mirabilis HI4320]
Length = 357
Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 143/362 (39%), Positives = 210/362 (58%), Gaps = 25/362 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP S IA P R RL+ + +S + +D+ LN+ D +V
Sbjct: 1 MRVSDFRFDLPESLIAHYPHPQRSGCRLLSLEGKTGN---LSHGVFTDVLDKLNAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + R SK K+G L +
Sbjct: 58 FNNTRVIPARIYGRKASG-----GKIEVLVERMLDEHRVLAHVRASKSPKEGASL-ILGE 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARKRPIDARD 176
D ++AT+I + +T +F I + ER + + +G +PLPPYI RP + D
Sbjct: 112 D--ESVQATMIARHDT-----LFEIR-FDDERDVLTILNSIGHMPLPPYI--DRPDERSD 161
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT Y + G+VAAPTAGLHF LL L + G+++ FVTLHVGAGTF PV+V++ +
Sbjct: 162 KELYQTVYNERPGAVAAPTAGLHFDEPLLEALRNKGVEMAFVTLHVGAGTFQPVRVDNIE 221
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTN 294
+H MHSE + A+ + K+RG R+++VGTTS+R LE+A +D +I P+ T
Sbjct: 222 EHTMHSEYAEVPQEVVDAVLACKARGNRVIAVGTTSVRSLESAAKAAKDALIAPFFDDTQ 281
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y A+ YRF+SYGD
Sbjct: 282 IFIYPGYQYQIIDALITNFHLPESTLIMLVSAFAGYKNTMNAYNVAVEQKYRFFSYGDAM 341
Query: 355 LL 356
+
Sbjct: 342 FI 343
>gi|229844948|ref|ZP_04465085.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae 6P18H1]
gi|229812082|gb|EEP47774.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae 6P18H1]
Length = 363
Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 140/364 (38%), Positives = 207/364 (56%), Gaps = 19/364 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R S RL+ ++ I SD+ ++ D ++
Sbjct: 1 MRVSDFNFDLPDELIARYPKTDRVSCRLLQLNGENG---EIFHRTFSDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + + R SK K+G L F +
Sbjct: 58 FNNTRVIPARMFGGKASG-----GKIEVLVERMLDEHRFLAHIRSSKSPKEGAEL-FLGE 111
Query: 121 D--GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
D G++ V+ ++ + S L + +G +PLPPYI RP + D
Sbjct: 112 DKLGENNGIKAVMKARHSSLFEVELSDKSTALLDVLQTIGHMPLPPYI--DRPDEEADKE 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y+K+ G+VAAPTAGLHF LL +L G+ FVTLHVGAGTF PV+VE+ +DH
Sbjct: 170 CYQTVYSKVPGAVAAPTAGLHFDDPLLEKLKKKGVNFEFVTLHVGAGTFQPVRVENIEDH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTED----GIINPWSGF 292
+MH+E + A+ + K G R+++VGTTS+R +E+A + E+ +I P+
Sbjct: 230 VMHAEYVEVSQEVCNAIIATKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSD 289
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + T Y+ A+ + YRF+SYGD
Sbjct: 290 TSIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKSAVENHYRFFSYGD 349
Query: 353 TSLL 356
+
Sbjct: 350 AMFI 353
>gi|329894274|ref|ZP_08270160.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [gamma
proteobacterium IMCC3088]
gi|328923205|gb|EGG30527.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [gamma
proteobacterium IMCC3088]
Length = 346
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 140/349 (40%), Positives = 194/349 (55%), Gaps = 13/349 (3%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
++ FDLP IA P+ R ++RL+ + N ++ +DL + ND +VFNNT
Sbjct: 7 DYYFDLPEHLIAQHPLPDRSASRLLCLDRNSGA---VNHAQFTDLLELVRPNDLLVFNNT 63
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQS 124
KVI A++ G + ++ + VS V+ R S+ K G ++ FS+D +S
Sbjct: 64 KVIPARMYGQKPTG-----GQLEILVERIVSSQQALVHMRSSRSPKPGSMVEIFSKD-RS 117
Query: 125 RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTY 184
+ V G + LV + I G +PLPPYI R + D YQT Y
Sbjct: 118 GVAGEVSVLGREGALFLV-EARDEAITALIERCGHMPLPPYIERAE--EQADLERYQTVY 174
Query: 185 AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEI 244
AK +G+VAAPTAGLHFT +L L G++ VTLHVGAGTF PVK +D H MH+E
Sbjct: 175 AKKEGAVAAPTAGLHFTPEILRALKDKGVEFAEVTLHVGAGTFQPVKEDDIRAHTMHTEW 234
Query: 245 GFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFR 304
+ + + K RGGR+++VGTTS+R LE+A+ +G + G T IFI PGY F+
Sbjct: 235 FEVADEVVKLVEETKQRGGRVIAVGTTSVRSLESASL-NGRLQSMRGDTEIFIYPGYEFK 293
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
VD L++NFHLP+STL+MLVSA E Y A+ H YRF+SYGD
Sbjct: 294 TVDALITNFHLPESTLIMLVSALADRESVLAAYDEAVRHEYRFFSYGDA 342
>gi|52842221|ref|YP_096020.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
gi|52629332|gb|AAU28073.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
Length = 349
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 142/357 (39%), Positives = 206/357 (57%), Gaps = 20/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F FDLP IA P+ R +RL++ + + ++ FL D +V
Sbjct: 13 MNKQDFYFDLPSELIAQYPLANRSDSRLLIYNRQTE---EYGHYQFREIADFLQPGDLLV 69
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N++KVI A+L G + ++ + ++ + + SK +K D+++
Sbjct: 70 MNDSKVIPARLYGHK-----ATGGKVELLVERITGDFTFLAHIKASKSLKSNDLIYL--- 121
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D RLE V+ + + ++ L + I ++ +G IPLPPYIAR+ ++ D Y
Sbjct: 122 DAGKRLE--VLQRQD--DLFLCKACENIL--DLLNDLGHIPLPPYIARED--ESLDKERY 173
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GSVAAPTAGLHF +LS + + G+ + +VTLHVGAGTF PV+ E DH M
Sbjct: 174 QTVYAKCAGSVAAPTAGLHFDDAVLSSIRARGVNIAYVTLHVGAGTFRPVRCERIQDHKM 233
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + KS G R+++VGTT+LR LE+A +I P S T+IFI PG
Sbjct: 234 HSEWFTVSPDLCTAVKAAKSMGNRVIAVGTTALRSLESAAMGGELI-PCSRDTDIFIYPG 292
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ D L++NFHLP+STL+MLVSAF G +E +YQ AI YRF+SYGD SLL
Sbjct: 293 YQFKVCDGLITNFHLPESTLVMLVSAFIGHQECMALYQEAIDKRYRFFSYGDASLLL 349
>gi|170732044|ref|YP_001763991.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia cenocepacia MC0-3]
gi|238688590|sp|B1JVY9|QUEA_BURCC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|169815286|gb|ACA89869.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Burkholderia cenocepacia MC0-3]
Length = 355
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 145/361 (40%), Positives = 204/361 (56%), Gaps = 21/361 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LPP IA + R ++RL+ V +++ P + D ++LP+ + D +VFN
Sbjct: 4 LSDFDFNLPPELIAQTALPDRTASRLLEVDGSVA-PARLVDRHFAELPSCIAPGDLLVFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKV+ A RF +I + ++ R SK G L
Sbjct: 63 DTKVLKA-----RFFGQKASGGKIEVLIERVTGTHTALAQIRASKSPGAGTTLRL----- 112
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ TV ++ L F ++L I G +PLPPYI + DA D YQT
Sbjct: 113 ADAFDVTVGERVEPF-FTLHFPAPCLDL---IEQHGRLPLPPYI--EHDADATDETRYQT 166
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA G+VAAPTAGLHF LL +L ++G++ +TLHVGAGTF PV+VE+ +H MHS
Sbjct: 167 VYASNPGAVAAPTAGLHFDQPLLEKLDAMGVERATLTLHVGAGTFQPVRVENIAEHKMHS 226
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGF---TNIFIT 298
E + + + ++RGG +++VGTTS+R LE A + D P + T+IFIT
Sbjct: 227 EWYDLPQSLVDKIAATRARGGNVIAVGTTSMRALEAAARSADEAGRPLAATQAETDIFIT 286
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGYRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI YRF+SYGD LL +
Sbjct: 287 PGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIRAAYRHAIEERYRFFSYGDAMLLTR 346
Query: 359 K 359
+
Sbjct: 347 R 347
>gi|332038774|gb|EGI75216.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pseudoalteromonas haloplanktis ANT/505]
Length = 343
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 143/364 (39%), Positives = 211/364 (57%), Gaps = 26/364 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLV-SDLPAFLNSNDAI 59
M V +F FDLP IA P R S+RL+ L P +H V SD+ +N D +
Sbjct: 1 MRVADFSFDLPDELIARFPKADRTSSRLL----TLDGPSGTLEHKVFSDILDLVNEGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A++ G + ++ + + + + R SK +K G+ +
Sbjct: 57 VFNNTRVIPARMFGQKASG-----GKVEVLVERVLDEHRVLAHVRASKSLKVGNEVIL-- 109
Query: 120 QDGQSRLEATVIDKWNT-GEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ + +A ++ + +T E+ S + +++ ++ +G +PLPPYI RP D
Sbjct: 110 ---EGKAKAIMVARHDTLFELEFDHSQNVLDI---LNDIGHMPLPPYI--DRPDTDADRE 161
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y + G+VAAPTAGLHF L++ L G+ + FVTLHVGAGTF PV+V+ D+H
Sbjct: 162 RYQTVYGEKPGAVAAPTAGLHFDDKLMTALKDKGVNMAFVTLHVGAGTFQPVRVDSVDEH 221
Query: 239 IMHSEIGFIDAP--TAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNI 295
+MHSE +I+ P A+ K+ GGR+++VGTTS+R LE+A G ++ + G T+I
Sbjct: 222 VMHSE--YIEVPDDVVAAVAQTKANGGRVIAVGTTSVRSLESAAKVHGGKLDTYFGDTDI 279
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGY+F VD +++NFHLP+STL+MLVSAF G + Y AI YRF+SYGD
Sbjct: 280 FIFPGYQFNVVDAMVTNFHLPESTLIMLVSAFSGQDNIMGAYNTAIEQQYRFFSYGDAMF 339
Query: 356 LFQK 359
L +K
Sbjct: 340 LTRK 343
>gi|183601032|ref|ZP_02962525.1| hypothetical protein PROSTU_04653 [Providencia stuartii ATCC 25827]
gi|188019370|gb|EDU57410.1| hypothetical protein PROSTU_04653 [Providencia stuartii ATCC 25827]
Length = 356
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 141/359 (39%), Positives = 208/359 (57%), Gaps = 25/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP IA P R + RL+ +L P H + +D+ L+ D +
Sbjct: 1 MRVSDFTFELPEELIAHYPQAQRSACRLL----SLDGPTGQLTHGIFTDILEKLSPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + + R SK K+G L
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEMLVERMLDEHRVLAHIRASKAPKEGAEL-ILG 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISL---VGTIPLPPYIARKRPIDARD 176
+D + AT++ + +F + + +S+ +G +PLPPYI RP + D
Sbjct: 111 ED--ESVNATMVARHGA-----LFEVQFDDQRDVLSILNEIGHMPLPPYI--DRPDEESD 161
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT Y++ G+VAAPTAGLHF LL L G+++ FVTLHVGAGTF PV+V+ +
Sbjct: 162 KELYQTVYSQRPGAVAAPTAGLHFDEPLLDALREKGVEMAFVTLHVGAGTFQPVRVDAIE 221
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTN 294
DH+MHSE + A+ + K+RG R+V+VGTTS+R LE+A ++D +I P+ T
Sbjct: 222 DHVMHSEYAEVPQEVVDAVLACKARGNRVVAVGTTSVRSLESAAKASQDALIAPFFDDTQ 281
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFI PG+ ++ VD L++NFHLP+STL+MLVSAF G + T + Y+ A++ YRF+SYGD
Sbjct: 282 IFIYPGFEYQVVDALITNFHLPESTLIMLVSAFAGYQNTMQAYKEAVAQKYRFFSYGDA 340
>gi|54307937|ref|YP_128957.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Photobacterium profundum SS9]
gi|46912363|emb|CAG19155.1| putative S-adenosylmethionine:tRNAribosyltransferase-isomerase
[Photobacterium profundum SS9]
Length = 367
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 147/365 (40%), Positives = 205/365 (56%), Gaps = 23/365 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + I D+ S D V
Sbjct: 17 MQVSDFHFDLPNELIARYPQPERTASRLLQLTGETGN---IQHKGFKDVLDLAESGDLFV 73
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + S + R SK K G+ L
Sbjct: 74 FNNTRVIPARIFGRKASG-----GKIEVLVERILDDKSILAHVRASKSPKPGNELLLGEN 128
Query: 121 DGQSRLEATVIDKWNT-GEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
D +A +I + +T EI + +E+ + VG +PLPPYI RP + D
Sbjct: 129 DD---YQAEMIARHDTLFEIRFNSDKTVLEI---LEEVGHMPLPPYI--DRPDEDADKER 180
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y G+VAAPTAGLHF L++ L + G+ FVTLHVGAGTF PV+V++ DDH
Sbjct: 181 YQTVYNAKPGAVAAPTAGLHFDDKLMAALKAKGVNFAFVTLHVGAGTFQPVRVDNIDDHH 240
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-----INPWSGFTN 294
MHSE + A+N+ K+ GGRI++VGTTS+R LE+A +D + + P+ G T
Sbjct: 241 MHSEYVEVPQDVVDAVNATKANGGRIIAVGTTSVRSLESA-AQDAVKKGTELVPFFGDTE 299
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PGY F+ VD+L++NFHLP+STL+MLVSAF G E T Y A+ + YRF+SYGD+
Sbjct: 300 IFIFPGYEFQLVDVLVTNFHLPESTLIMLVSAFAGYEHTMNAYLQAVDNKYRFFSYGDSM 359
Query: 355 LLFQK 359
+ ++
Sbjct: 360 FITRR 364
>gi|148359575|ref|YP_001250782.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase [Legionella
pneumophila str. Corby]
gi|166216730|sp|A5IDI6|QUEA_LEGPC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|148281348|gb|ABQ55436.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase [Legionella
pneumophila str. Corby]
Length = 337
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 141/357 (39%), Positives = 204/357 (57%), Gaps = 20/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F FDLP IA P+ R +RL++ + + ++ FL D +V
Sbjct: 1 MNKQDFYFDLPSELIAQYPLANRSDSRLLIYNRQTE---EYGHYQFREIADFLQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N++KVI A+L G + ++ + ++ + + SK +K D ++
Sbjct: 58 MNDSKVIPARLYGHK-----ATGGKVELLVERITGDFTFLAHIKASKSLKSNDFIYL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D RLE V+++ + L + + ++ +G IPLPPYIAR+ ++ D Y
Sbjct: 110 DAGKRLE--VLERQDD----LFLCKASENILDLLNDLGHIPLPPYIARED--ESLDKERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GSVAAPTAGLHF +LS + + G+ + +VTLHVGAGTF PV+ E DH M
Sbjct: 162 QTVYAKCAGSVAAPTAGLHFDDAVLSSIRARGVNIAYVTLHVGAGTFRPVRCERIQDHKM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + KS G R+++VGTT+LR LE+A +I P S T+IFI PG
Sbjct: 222 HSEWFTVSPDLCAAVKAAKSMGNRVIAVGTTALRSLESAAMGGELI-PCSRDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ D L++NFHLP+STL+MLVSAF G +E +YQ AI YRF+SYGD SLL
Sbjct: 281 YQFKVCDGLITNFHLPESTLVMLVSAFIGHQECMALYQEAIDKRYRFFSYGDASLLL 337
>gi|260913673|ref|ZP_05920149.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pasteurella
dagmatis ATCC 43325]
gi|260632212|gb|EEX50387.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pasteurella
dagmatis ATCC 43325]
Length = 363
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 145/371 (39%), Positives = 215/371 (57%), Gaps = 33/371 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R S+RL+ ++ IS +D+ +N D ++
Sbjct: 1 MRVADFHFDLPDELIARYPKTERKSSRLLQLNGENG---EISHRTFADVIDQINEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + ++ + + R SK K+G L + +
Sbjct: 58 FNNTRVIPARMFGRKASG-----GKVEVLVERILTDTRFLAHVRSSKAPKEGAEL-WLGE 111
Query: 121 D--GQSR-LEATVIDKWNTGEILLVFSISGIELERQISL------VGTIPLPPYIARKRP 171
D G++ ++ T++ + +T L I+ E+Q +L +G +PLPPYI RP
Sbjct: 112 DKLGENNGVKMTMVARHDT---LFELEIA----EKQTALLEVLQQIGHMPLPPYI--DRP 162
Query: 172 IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK 231
+ D YQT Y K+ G+VAAPTAGLHF LL++L + G+ FVTLHVGAGTF PV+
Sbjct: 163 DEDADQERYQTVYNKVPGAVAAPTAGLHFDDELLAQLKAKGVNFAFVTLHVGAGTFQPVR 222
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDG----I 285
VE +DH MH+E + A+ + K G R+++VGTTS+R +E+A TE+ +
Sbjct: 223 VEHIEDHKMHAEYVEVPQEVCDAIIATKQAGKRVIAVGTTSVRSVESAALATEEKHSARL 282
Query: 286 INPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAY 345
I P+ T+IFI PG FR VD L++NFHLP+STL+MLVSAF G + T + YQ A+ + Y
Sbjct: 283 IEPYFSDTSIFIYPGKTFRVVDCLITNFHLPESTLIMLVSAFAGYKHTMQAYQSAVENRY 342
Query: 346 RFYSYGDTSLL 356
RF+SYGD +
Sbjct: 343 RFFSYGDAMFI 353
>gi|110640666|ref|YP_668394.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 536]
gi|191173478|ref|ZP_03035005.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli F11]
gi|300997408|ref|ZP_07181748.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 200-1]
gi|306813129|ref|ZP_07447322.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli NC101]
gi|331645578|ref|ZP_08346682.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli M605]
gi|123344315|sp|Q0TKN6|QUEA_ECOL5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|110342258|gb|ABG68495.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 536]
gi|190906187|gb|EDV65799.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli F11]
gi|281177575|dbj|BAI53905.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli SE15]
gi|300304227|gb|EFJ58747.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 200-1]
gi|305853892|gb|EFM54331.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli NC101]
gi|315299571|gb|EFU58819.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 16-3]
gi|320197159|gb|EFW71776.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli WV_060327]
gi|323191323|gb|EFZ76586.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli RN587/1]
gi|324010665|gb|EGB79884.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 60-1]
gi|330910199|gb|EGH38709.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli AA86]
gi|331045740|gb|EGI17866.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli M605]
Length = 356
Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 145/365 (39%), Positives = 207/365 (56%), Gaps = 31/365 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R S RL+ +L P H +DL LN D +
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLL----SLDGPTGALTHGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + R SK K G
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEVLVERMLDDKRILAHIRASKAPKPG--AELLL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISL------VGTIPLPPYIARKRPID 173
D +S + AT+ + ++ +E Q S+ +G +PLPPYI RP +
Sbjct: 110 GDDES-INATMTARHG--------ALFEVEFNDQRSVLDILNSIGHMPLPPYI--DRPDE 158
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+
Sbjct: 159 DADRELYQTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVD 218
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSG 291
+DHIMHSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+
Sbjct: 219 TIEDHIMHSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFD 278
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T IFI PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYG
Sbjct: 279 DTQIFIYPGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYG 338
Query: 352 DTSLL 356
D +
Sbjct: 339 DAMFI 343
>gi|237808776|ref|YP_002893216.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Tolumonas
auensis DSM 9187]
gi|259551487|sp|C4L7L4|QUEA_TOLAT RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|237501037|gb|ACQ93630.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Tolumonas
auensis DSM 9187]
Length = 348
Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 142/364 (39%), Positives = 205/364 (56%), Gaps = 23/364 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +F FDLP IA P+ R ++RL+++ N D+ L D +V
Sbjct: 1 MLVSDFQFDLPDELIARYPMPERSASRLLMLDGNSGE---TRHGQFRDVLDLLQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + +S + R SK K G +
Sbjct: 58 FNNTRVIPARMFGQKAS-----GGKLEILVERILDDHSVLAHVRASKAPKPGTQILL--- 109
Query: 121 DGQSRLEATVIDKWNT-GEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ A ++ + +T E+ + +++ QI G +PLPPYI RP + D
Sbjct: 110 --DNGFSAKMVARHDTLFELHFAGDLPVLDILNQI---GHMPLPPYI--DRPDENSDKER 162
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y + G+VAAPTAGLHF LL+ L G+ +VTLHVGAGTF PV+VE +DH
Sbjct: 163 YQTVYNQRPGAVAAPTAGLHFDEPLLAALREKGVDFAYVTLHVGAGTFQPVRVERLEDHQ 222
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED----GIINPWSGFTNI 295
MHSE + A +N+ + RGGR+V+VGTTS+R LETA ++P+ G T+I
Sbjct: 223 MHSEYAEVPAEVIAKINATRERGGRVVAVGTTSVRSLETAAQASLKAGKPLSPFFGDTSI 282
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGY+++ VD+L++NFHLP STL+MLVSAF G E YQ AI+ YRF+SYGD
Sbjct: 283 FIFPGYQYQLVDVLITNFHLPGSTLIMLVSAFAGYEHVMNAYQEAITSGYRFFSYGDAMF 342
Query: 356 LFQK 359
+ ++
Sbjct: 343 ITRQ 346
>gi|219870890|ref|YP_002475265.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
parasuis SH0165]
gi|254764279|sp|B8F4R5|QUEA_HAEPS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|219691094|gb|ACL32317.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
parasuis SH0165]
Length = 361
Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 142/370 (38%), Positives = 205/370 (55%), Gaps = 34/370 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ ++ N D +DL ++S D ++
Sbjct: 1 MRVTDFHFDLPDELIARYPTAERSASRLLYLNGNTG---EYQDQQFNDLLEHIHSGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCH------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
FNNT+VI A+L G + + R E C H+R SK K+
Sbjct: 58 FNNTRVIPARLYGRKASGGKLEVLVERVLDEHRCLAHIR-----------SSKAPKENAE 106
Query: 115 LHFFSQD--GQSR-LEATVIDKWNT-GEILLVFSISGIELERQISLVGTIPLPPYIARKR 170
+ F +D G+ +A ++ +++ E+ S +L +Q G +PLPPYI R
Sbjct: 107 I-FLGEDKLGEGNGFKAIMVARYDALFELKFEASQPLFDLLQQ---AGHMPLPPYI--DR 160
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
P + D YQT Y+K+ G+VAAPTAGLHF +L +L G++ FVTLHVGAGTF PV
Sbjct: 161 PDEDADQERYQTVYSKVLGAVAAPTAGLHFDHQMLQKLQEKGVQTAFVTLHVGAGTFQPV 220
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGII 286
+VE ++H MH+E + + + K++G R++ VGTTS+R +E+A E +I
Sbjct: 221 RVETIEEHKMHAEYAEVSQDVVDKILATKAQGKRVICVGTTSVRSIESAAQAAEKEGKLI 280
Query: 287 NPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYR 346
P+ T IF+ PG FR VD L++NFHLP+STL+MLVSAF G + YQHA+ YR
Sbjct: 281 APFYSDTTIFLYPGKTFRIVDALVTNFHLPESTLIMLVSAFAGFKNCMNAYQHAVESQYR 340
Query: 347 FYSYGDTSLL 356
F+SYGD +
Sbjct: 341 FFSYGDAMFI 350
>gi|56751764|ref|YP_172465.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus elongatus PCC 6301]
gi|81561754|sp|Q5N175|QUEA_SYNP6 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|56686723|dbj|BAD79945.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus elongatus PCC 6301]
Length = 359
Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 143/353 (40%), Positives = 191/353 (54%), Gaps = 14/353 (3%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
+D++LPP RIA V PRD ARL V P+ + H DLP L D ++ N+T+
Sbjct: 14 YDYELPPDRIAQSAVEPRDHARLSVF-PDREQ--LWHRHFY-DLPQLLRPGDLLIVNDTR 69
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSR 125
VI A+L G + + L P W +P K +K G + F
Sbjct: 70 VIPARLYGQKI----ETGVPVEVLLVEEHGPGYWLTLVKPGKRLKPGSAIAFGPNPEDPL 125
Query: 126 LEATV-IDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTY 184
L A V TG L F Q++ +G +PLPPYI A D YQT Y
Sbjct: 126 LVADVEASDPATGGRWLRFRGEAEAFWSQLATLGEMPLPPYIH----TTASDPERYQTVY 181
Query: 185 AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEI 244
++ G+VAAPTAGLHFT LL+ L +GI VTLHVG GTF V VED H MHSE
Sbjct: 182 SRELGAVAAPTAGLHFTPELLTTLADMGIATAPVTLHVGIGTFRSVDVEDIRQHEMHSER 241
Query: 245 GFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFR 304
+ A T + + + K+ GGR+++VGTTS+R +E A G + P S N+FI PGYR++
Sbjct: 242 MMVPAATVEKIQATKAAGGRVIAVGTTSVRAIEGAAA-SGELKPGSDRVNLFIYPGYRWQ 300
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+D L++NFHLP+S+L+MLVSA G + Y AI+ YRFYS+GD L+
Sbjct: 301 IIDGLITNFHLPRSSLMMLVSALIGRDRLLSAYATAIAEQYRFYSFGDAMLIL 353
>gi|218688268|ref|YP_002396480.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli ED1a]
gi|254764277|sp|B7MPG6|QUEA_ECO81 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|218425832|emb|CAR06638.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli ED1a]
Length = 356
Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 144/365 (39%), Positives = 208/365 (56%), Gaps = 31/365 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R S RL+ +L P ++ +DL LN D +
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLL----SLDGPTGALTHGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + R SK K G
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEVLVERMLDDKRIFAHIRASKAPKPG--AELLL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISL------VGTIPLPPYIARKRPID 173
D +S + AT+ + ++ +E Q S+ +G +PLPPYI RP +
Sbjct: 110 GDDES-INATMTARHG--------ALFEVEFNDQRSVLDILNSIGHMPLPPYI--DRPDE 158
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+
Sbjct: 159 DADRELYQTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVD 218
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSG 291
+DHIMHSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+
Sbjct: 219 TIEDHIMHSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFD 278
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T IFI PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYG
Sbjct: 279 DTQIFIYPGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYG 338
Query: 352 DTSLL 356
D +
Sbjct: 339 DAMFI 343
>gi|304311792|ref|YP_003811390.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [gamma
proteobacterium HdN1]
gi|301797525|emb|CBL45745.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [gamma
proteobacterium HdN1]
Length = 346
Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 149/367 (40%), Positives = 196/367 (53%), Gaps = 33/367 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F F+LP IA P R +RL+VV + D DL +L D +V
Sbjct: 1 MQRSDFHFELPAELIASHPAQERTGSRLLVVDRKQHA---LHDRQFPDLLDWLEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCH------INRREKEISCTLHMRVS----PNSW-SVYARPSKVI 109
FNNT+VI A+L G + + R C H+R S P S V A +VI
Sbjct: 58 FNNTRVIPARLFGQKETGGQVEILVERLLSARKCLAHVRASKSPKPGSAIQVGAYQLRVI 117
Query: 110 KKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARK 169
+ D L + + + DK EL + G IPLPPYI
Sbjct: 118 ARHDALFELALETAT----NAPDKRPA------------ELTDLLEQEGHIPLPPYI--D 159
Query: 170 RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
R + RD YQT Y+K+ G+VAAPTAGLHF L RL G+++ VTLHVGAGTF P
Sbjct: 160 RADEPRDRERYQTVYSKVPGAVAAPTAGLHFDQAFLERLRERGVRMAHVTLHVGAGTFQP 219
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPW 289
V+ E+ +H MHSE + + + K+ G R+++VGTTS+R LETA +G I P+
Sbjct: 220 VRAENILEHHMHSEWLQVSPEAVDLVRATKAAGKRVIAVGTTSVRSLETA-ARNGEIAPY 278
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
G T+IFI PGY FR VD L++NFHLP+STL+MLVSA G E + Y HAI+ Y F+S
Sbjct: 279 EGDTDIFIYPGYSFRVVDALITNFHLPESTLIMLVSALAGREFVLQAYAHAIAQRYHFFS 338
Query: 350 YGDTSLL 356
YGD L+
Sbjct: 339 YGDAMLI 345
>gi|119505230|ref|ZP_01627305.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [marine
gamma proteobacterium HTCC2080]
gi|119458921|gb|EAW40021.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [marine
gamma proteobacterium HTCC2080]
Length = 358
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 139/353 (39%), Positives = 200/353 (56%), Gaps = 12/353 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F +DLP IA P+ R +RL+V+ + + S L L ND +V
Sbjct: 1 MRRQDFYYDLPEELIAQEPLAQRTGSRLLVLDGDTGG---VRHSQFSRLIDLLEPNDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L GV+ + + + + S + R SK K G +
Sbjct: 58 FNNTRVIPARLFGVK-----QTGGRVEILIERLLEGGSALAHVRASKSPKPGAAILITPD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D E +V + G + + SG + + +G +PLPPYI +R DA+D Y
Sbjct: 113 DQSDATEFSVRVEGRRGALFELVVDSG-SWPQILKTLGHMPLPPYI--ERSDDAQDRQRY 169
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF +++++ + S GIK VTLHVGAGTF PV+ E+ DH M
Sbjct: 170 QTVFARRDGAVAAPTAGLHFDAHMIADIESRGIKTTEVTLHVGAGTFQPVRAENIADHHM 229
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ + GR+V+VGTT++R LETA + G + +SG +NIF+ PG
Sbjct: 230 HSEWLEVNDEVVAAVQRCREAKGRVVAVGTTAVRSLETA-AQGGALRRFSGDSNIFLYPG 288
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
F VD +++NFHLP+STL+MLV+AF G ET YQ A+ YRF+SYGD
Sbjct: 289 QPFNVVDAMVTNFHLPESTLIMLVAAFAGHRETMSAYQEAVDQRYRFFSYGDA 341
>gi|85058623|ref|YP_454325.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Sodalis
glossinidius str. 'morsitans']
gi|123519936|sp|Q2NVA5|QUEA_SODGM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|84779143|dbj|BAE73920.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Sodalis
glossinidius str. 'morsitans']
Length = 353
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 141/357 (39%), Positives = 202/357 (56%), Gaps = 22/357 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F LP + IA P R + RL+ + ++ + +DL L D +V
Sbjct: 1 MRVADFSFALPDNLIARYPQAQRSACRLLSLDGQTGA---LAHQVFTDLLEELAPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKVSG-----GKIEVLVERVLDDKRVLAHVRASKAPKPGSALLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLV---GTIPLPPYIARKRPIDARDY 177
D + AT++ + + +F + + ++L+ G +PLPPYI RP D D
Sbjct: 113 DS---IAATMVARHDA-----LFELRFDDARDVLTLLNDAGHMPLPPYI--DRPDDVADR 162
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT Y + GSVAAPTAGLHF LL+ L + G+++ FVTLHVGAGTF PV+V+ +
Sbjct: 163 ELYQTVYGERPGSVAAPTAGLHFDEPLLAALRAKGVEMAFVTLHVGAGTFQPVRVDQIEH 222
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIF 296
H MHSE + A+ + K+RG R+V+VGTT++R LE+A + + P+ G T+IF
Sbjct: 223 HQMHSEYAEVPQEVVDAVLACKARGNRVVAVGTTAVRSLESAAAAGEQALTPFFGDTSIF 282
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
I GY+FR VD+L++NFHLP+STL+MLVSAF G T Y+ A++ AYRF+SYGD
Sbjct: 283 IYTGYQFRVVDVLITNFHLPESTLIMLVSAFAGYRHTLAAYREAVAQAYRFFSYGDA 339
>gi|327399541|ref|YP_004340410.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Hippea
maritima DSM 10411]
gi|327182170|gb|AEA34351.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Hippea
maritima DSM 10411]
Length = 343
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 132/359 (36%), Positives = 204/359 (56%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FD++LP IA P PRD +L+V + I + ++ +++ ND +V
Sbjct: 1 MEVSLFDYNLPKELIAQHPHIPRDECKLLVCNRQNH---TIEHRIFKEIINYIDENDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A++ + +I L + + R +KK I++
Sbjct: 58 LNDTKVIPARIFAQKPTG-----GKIEIFLLEEIGKGRFLCLTRGK--LKKDTIVYL--- 107
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI--DARDYV 178
++ A + N+ + ++ F + + + +G +PLPPYI R +D+
Sbjct: 108 --KNSKTARITRIENSDKRIVEFETNE-NIYELLEDIGEVPLPPYIQRNYDNYNKEKDFK 164
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT +AK +G+VA+PTAGLHFT L++ + + G+K+ ++TLHVG GTF PVK ++ + H
Sbjct: 165 YYQTVFAKKEGAVASPTAGLHFTEKLINSIKAKGVKIAYITLHVGIGTFRPVKEKEVEKH 224
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE I TA N KS+ R+++VGTT +R LE++ +DGI+ P T+IFI
Sbjct: 225 KMHSEKYQISKETADLFNQTKSKRRRVIAVGTTVVRALESSINKDGILKPQKSSTDIFIY 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++AVD L++NFHLPKSTLLMLVSAF E+ Y+ AI YRF+S+GD ++
Sbjct: 285 PGYKYKAVDALITNFHLPKSTLLMLVSAFYEREKILNCYKEAIDKHYRFFSFGDAMFIY 343
>gi|107021799|ref|YP_620126.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia cenocepacia AU 1054]
gi|116688746|ref|YP_834369.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia cenocepacia HI2424]
gi|123245266|sp|Q1BZ02|QUEA_BURCA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|166216705|sp|A0K4P9|QUEA_BURCH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|105891988|gb|ABF75153.1| S-adenosylmethionine [Burkholderia cenocepacia AU 1054]
gi|116646835|gb|ABK07476.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Burkholderia cenocepacia HI2424]
Length = 355
Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 145/361 (40%), Positives = 204/361 (56%), Gaps = 21/361 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LPP IA + R ++RL+ V +++ P + D ++LP+ + D +VFN
Sbjct: 4 LSDFDFNLPPELIAQTALPDRTASRLLEVDGSVA-PARLVDRHFAELPSCIAPGDLLVFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKV+ A RF +I + ++ R SK G L
Sbjct: 63 DTKVLKA-----RFFGQKASGGKIEVLIERVTGTHTALAQIRASKSPGAGTTLRL----- 112
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ TV ++ L F ++L I G +PLPPYI + DA D YQT
Sbjct: 113 ADAFDVTVGERVEPF-FTLHFPAPCLDL---IEQHGRLPLPPYI--EHDADATDETRYQT 166
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA G+VAAPTAGLHF LL +L ++G++ +TLHVGAGTF PV+VE+ +H MHS
Sbjct: 167 VYASNPGAVAAPTAGLHFDQPLLDKLDAMGVERATLTLHVGAGTFQPVRVENIAEHKMHS 226
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGF---TNIFIT 298
E + + + ++RGG +++VGTTS+R LE A + D P + T+IFIT
Sbjct: 227 EWYDLPQSLVDKIAATRARGGNVIAVGTTSMRALEAAARSADEAGRPLAATQAETDIFIT 286
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGYRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI YRF+SYGD LL +
Sbjct: 287 PGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIRAAYRHAIEERYRFFSYGDAMLLTR 346
Query: 359 K 359
+
Sbjct: 347 R 347
>gi|91207327|sp|Q5ZU04|QUEA_LEGPH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
Length = 337
Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 142/357 (39%), Positives = 206/357 (57%), Gaps = 20/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F FDLP IA P+ R +RL++ + + ++ FL D +V
Sbjct: 1 MNKQDFYFDLPSELIAQYPLANRSDSRLLIYNRQTE---EYGHYQFREIADFLQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N++KVI A+L G + ++ + ++ + + SK +K D+++
Sbjct: 58 MNDSKVIPARLYGHK-----ATGGKVELLVERITGDFTFLAHIKASKSLKSNDLIYL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D RLE V+ + + ++ L + I ++ +G IPLPPYIAR+ ++ D Y
Sbjct: 110 DAGKRLE--VLQRQD--DLFLCKACENIL--DLLNDLGHIPLPPYIARED--ESLDKERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GSVAAPTAGLHF +LS + + G+ + +VTLHVGAGTF PV+ E DH M
Sbjct: 162 QTVYAKCAGSVAAPTAGLHFDDAVLSSIRARGVNIAYVTLHVGAGTFRPVRCERIQDHKM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + KS G R+++VGTT+LR LE+A +I P S T+IFI PG
Sbjct: 222 HSEWFTVSPDLCTAVKAAKSMGNRVIAVGTTALRSLESAAMGGELI-PCSRDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ D L++NFHLP+STL+MLVSAF G +E +YQ AI YRF+SYGD SLL
Sbjct: 281 YQFKVCDGLITNFHLPESTLVMLVSAFIGHQECMALYQEAIDKRYRFFSYGDASLLL 337
>gi|311280707|ref|YP_003942938.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Enterobacter cloacae SCF1]
gi|308749902|gb|ADO49654.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Enterobacter cloacae SCF1]
Length = 356
Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 148/363 (40%), Positives = 206/363 (56%), Gaps = 27/363 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P R S RL+ +L P H +DL LN D +
Sbjct: 1 MRVADFSFELPESLIAHYPQPERSSCRLL----SLDGPTGTLTHGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEVLVERMLDDKRILAHIRASKAPKPGTEL--LL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARKRPIDAR 175
D +S + AT+ + + +F + ER + + +G +PLPPYI RP +
Sbjct: 110 GDDES-INATMTARHDA-----LFEVE-FNDERPVLDILNAIGHMPLPPYI--DRPDEDA 160
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y++ G+VAAPTAGLHF LL+ L GI++ FVTLHVGAGTF PV+V+
Sbjct: 161 DRELYQTVYSQKPGAVAAPTAGLHFDEPLLAALREKGIEMAFVTLHVGAGTFQPVRVDSI 220
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFT 293
+DHIMHSE + A+ + K+RG R+++VGTTS+R LE+A + I P+ G T
Sbjct: 221 EDHIMHSEYAEVPQEVVDAVMAAKARGSRVIAVGTTSVRSLESAAQAAKKERIEPFFGDT 280
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFI PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD
Sbjct: 281 QIFIYPGYQYQIIDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEQNYRFFSYGDA 340
Query: 354 SLL 356
+
Sbjct: 341 MFI 343
>gi|198245410|ref|YP_002214358.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|207855886|ref|YP_002242537.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
P125109]
gi|226713848|sp|B5FKQ9|QUEA_SALDC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|226713849|sp|B5QTF3|QUEA_SALEP RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|197939926|gb|ACH77259.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|206707689|emb|CAR31973.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
P125109]
gi|326622107|gb|EGE28452.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Dublin str. 3246]
Length = 354
Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 146/359 (40%), Positives = 205/359 (57%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P R RL+ +L P H +DL LN D +
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLL----SLEGPTGALTHGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEVLVERMLDDKRILAHIRASKAPKPGTEL--LL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
D +S + AT+ + G + V + ++ +G +PLPPYI RP + D
Sbjct: 110 GDDES-IHATMTARH--GALFEVEFNDPRPVLDILNAIGHMPLPPYI--DRPDEDADREL 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y++ G+VAAPTAGLHF LL+ L GI++ FVTLHVGAGTF PV+V+ +DHI
Sbjct: 165 YQTVYSEKPGAVAAPTAGLHFDEPLLAALREKGIEMAFVTLHVGAGTFQPVRVDTIEDHI 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFI 297
MHSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ G T IFI
Sbjct: 225 MHSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFGDTQIFI 284
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 285 YPGYQYKVIDALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQKYRFFSYGDAMFI 343
>gi|331656459|ref|ZP_08357421.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli TA206]
gi|331054707|gb|EGI26716.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli TA206]
Length = 356
Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 145/365 (39%), Positives = 207/365 (56%), Gaps = 31/365 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R S RL+ +L P H +DL LN D +
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLL----SLDGPTGALTHGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + R SK K G
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEVLVERMLDDKRILAHIRASKAPKPG--AELLL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISL------VGTIPLPPYIARKRPID 173
D +S + AT+ + ++ +E Q S+ +G +PLPPYI RP +
Sbjct: 110 GDDES-INATMTARHG--------ALFEVEFNDQRSVLDILNSIGHMPLPPYI--DRPDE 158
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+
Sbjct: 159 DADRELYQTVYSEKPGAVAAPTAGLHFDELLLEKLRAKGVEMAFVTLHVGAGTFQPVRVD 218
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSG 291
+DHIMHSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+
Sbjct: 219 TIEDHIMHSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFD 278
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T IFI PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYG
Sbjct: 279 DTQIFIYPGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYG 338
Query: 352 DTSLL 356
D +
Sbjct: 339 DAMFI 343
>gi|170021223|ref|YP_001726177.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli ATCC 8739]
gi|189038521|sp|B1J044|QUEA_ECOLC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|169756151|gb|ACA78850.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Escherichia coli ATCC 8739]
Length = 356
Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 145/363 (39%), Positives = 207/363 (57%), Gaps = 27/363 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R S RL++ L P H +DL LN D +
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLLL----LDGPTGALTHGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + R SK K G
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEVLVERMLDDKRILAHIRASKAPKPG--AELLL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARKRPIDAR 175
D +S + AT+ + +F + ER + + +G +PLPPYI RP +
Sbjct: 110 GDDES-INATMTARHGA-----LFEVE-FNDERSVLDILNSIGHMPLPPYI--DRPDEDA 160
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+
Sbjct: 161 DRELYQTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTI 220
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFT 293
+DHIMHSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T
Sbjct: 221 EDHIMHSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDT 280
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFI PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD
Sbjct: 281 QIFIYPGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDA 340
Query: 354 SLL 356
+
Sbjct: 341 MFI 343
>gi|307728505|ref|YP_003905729.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Burkholderia sp. CCGE1003]
gi|307583040|gb|ADN56438.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Burkholderia sp. CCGE1003]
Length = 352
Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 147/375 (39%), Positives = 203/375 (54%), Gaps = 42/375 (11%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVH--PNLSCPLVISDHLVSDLPAFLNSNDA 58
+ + +FDFDLPP IA + R ++RL+ V P+ ++D S+LP +N+ D
Sbjct: 2 LTLSDFDFDLPPELIAQVALPERSASRLLEVDNAPDADRAARLTDRRFSELPECINAGDL 61
Query: 59 IVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
+VFN+TKV+ A RF +I + V + R SK + G +
Sbjct: 62 LVFNDTKVLKA-----RFLGQKASGGKIEVLVERLVGERTALAQIRASKSPQPGTTIRL- 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
D ++ + T L F + L I G +PLPPYI + D+ D
Sbjct: 116 -ADAFDVTVGERVEPFYT----LHFPADCLTL---IEQYGRLPLPPYI--EHDPDSTDET 165
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YA+ G+VAAPTAGLHF L RL + G++ +TLHVGAGTF PV+VE+ +H
Sbjct: 166 RYQTVYAQNPGAVAAPTAGLHFDDALFERLDARGVQRATLTLHVGAGTFQPVRVENLAEH 225
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSL--------------RLLETATTEDG 284
MHSE + A + + ++RG R+++VGTTS+ R L A+TE
Sbjct: 226 KMHSEWYHLPQSLADKIAATRARGNRVIAVGTTSMRALEAAARDAEAAGRPLAAASTE-- 283
Query: 285 IINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHA 344
T+IFITPGYRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI
Sbjct: 284 --------TDIFITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIRAAYRHAIEQR 335
Query: 345 YRFYSYGDTSLLFQK 359
YRF+SYGD LL ++
Sbjct: 336 YRFFSYGDAMLLTRR 350
>gi|253687413|ref|YP_003016603.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Pectobacterium carotovorum subsp. carotovorum PC1]
gi|259551463|sp|C6DB25|QUEA_PECCP RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|251753991|gb|ACT12067.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Pectobacterium carotovorum subsp. carotovorum PC1]
Length = 355
Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 145/362 (40%), Positives = 210/362 (58%), Gaps = 25/362 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLV-SDLPAFLNSNDAI 59
M V +F F+LP S IA P R RL+ +L P H V +DL LN D +
Sbjct: 1 MRVADFSFELPESLIAHYPQAERSGCRLL----SLDGPTGDLTHGVFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + ++ + + + + R SK K G L
Sbjct: 57 VFNNTRVIPARLFGRKVS-----GGKLEVLVERVLDDHRVLAHVRASKAPKPGTEL--LL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISL---VGTIPLPPYIARKRPIDARD 176
D +S ++AT+ + + +F + + +S+ +G +PLPPYI RP + D
Sbjct: 110 GDDES-VKATMAARHDA-----LFELHFDDSRDVLSILNDIGHMPLPPYI--DRPDEDAD 161
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT Y++ G+VAAPTAGLHF +L+ L GI++ FVTLHVGAGTF PV+V+ +
Sbjct: 162 RELYQTVYSQRPGAVAAPTAGLHFDEPMLAALREKGIEMAFVTLHVGAGTFQPVRVDTIE 221
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTN 294
DHIMH+E + A+ + K+RG R+++VGTTS+R LE+A +++ I P+ G T
Sbjct: 222 DHIMHAEYAEVPQDVVDAVLACKARGNRVIAVGTTSVRSLESAAQASQNAPIEPFFGDTK 281
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PGY +R +D L++NFHLP+STL+MLVSAF G + T Y+ A++ YRF+SYGD
Sbjct: 282 IFIYPGYHYRIIDALVTNFHLPESTLIMLVSAFAGYQNTMSAYRQAVAEQYRFFSYGDAM 341
Query: 355 LL 356
+
Sbjct: 342 FI 343
>gi|15800132|ref|NP_286144.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 EDL933]
gi|15829710|ref|NP_308483.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. Sakai]
gi|16128390|ref|NP_414939.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli str. K-12 substr. MG1655]
gi|24111783|ref|NP_706293.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
flexneri 2a str. 301]
gi|30061900|ref|NP_836071.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
flexneri 2a str. 2457T]
gi|74310974|ref|YP_309393.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
sonnei Ss046]
gi|82775690|ref|YP_402037.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
dysenteriae Sd197]
gi|89107275|ref|AP_001055.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli str. K-12 substr. W3110]
gi|110804427|ref|YP_687947.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
flexneri 5 str. 8401]
gi|157154716|ref|YP_001461586.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli E24377A]
gi|157159925|ref|YP_001457243.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli HS]
gi|168749861|ref|ZP_02774883.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4113]
gi|168756941|ref|ZP_02781948.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4401]
gi|168761605|ref|ZP_02786612.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4501]
gi|168768350|ref|ZP_02793357.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4486]
gi|168776295|ref|ZP_02801302.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4196]
gi|168783265|ref|ZP_02808272.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4076]
gi|168786246|ref|ZP_02811253.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC869]
gi|168800282|ref|ZP_02825289.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC508]
gi|170079991|ref|YP_001729311.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli str. K-12 substr. DH10B]
gi|170767690|ref|ZP_02902143.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
albertii TW07627]
gi|188494964|ref|ZP_03002234.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 53638]
gi|194438913|ref|ZP_03070998.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 101-1]
gi|195938532|ref|ZP_03083914.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4024]
gi|208808051|ref|ZP_03250388.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4206]
gi|208815990|ref|ZP_03257169.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4045]
gi|208823080|ref|ZP_03263398.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4042]
gi|209400296|ref|YP_002269047.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4115]
gi|209917617|ref|YP_002291701.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli SE11]
gi|217324431|ref|ZP_03440515.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. TW14588]
gi|238899693|ref|YP_002925489.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli BW2952]
gi|253774610|ref|YP_003037441.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 'BL21-Gold(DE3)pLysS AG']
gi|254160471|ref|YP_003043579.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli B str. REL606]
gi|254791586|ref|YP_003076423.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. TW14359]
gi|256020372|ref|ZP_05434237.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
sp. D9]
gi|256023978|ref|ZP_05437843.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
sp. 4_1_40B]
gi|260853625|ref|YP_003227516.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O26:H11 str. 11368]
gi|261223882|ref|ZP_05938163.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. FRIK2000]
gi|261256404|ref|ZP_05948937.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. FRIK966]
gi|291281309|ref|YP_003498127.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O55:H7 str. CB9615]
gi|293413659|ref|ZP_06656308.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli B185]
gi|300820357|ref|ZP_07100509.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 119-7]
gi|300918216|ref|ZP_07134822.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 115-1]
gi|300924124|ref|ZP_07140116.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 182-1]
gi|300930301|ref|ZP_07145714.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 187-1]
gi|300947945|ref|ZP_07162092.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 116-1]
gi|300957968|ref|ZP_07170134.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 175-1]
gi|301330735|ref|ZP_07223337.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 78-1]
gi|301647325|ref|ZP_07247138.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 146-1]
gi|307137047|ref|ZP_07496403.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli H736]
gi|307312220|ref|ZP_07591856.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Escherichia
coli W]
gi|309786992|ref|ZP_07681604.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
dysenteriae 1617]
gi|312970499|ref|ZP_07784680.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 1827-70]
gi|331640921|ref|ZP_08342056.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli H736]
gi|331666754|ref|ZP_08367628.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli TA271]
gi|331676072|ref|ZP_08376784.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli H591]
gi|67471968|sp|P0A7F9|QUEA_ECOLI RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|67471969|sp|P0A7G0|QUEA_ECO57 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|67471970|sp|P0A7G1|QUEA_SHIFL RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|91207403|sp|Q32JF9|QUEA_SHIDS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|91207404|sp|Q3Z504|QUEA_SHISS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|123048415|sp|Q0T7I4|QUEA_SHIF8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|167016404|sp|A7ZIF7|QUEA_ECO24 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|167016405|sp|A7ZX56|QUEA_ECOHS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|226713837|sp|B5Z2W1|QUEA_ECO5E RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|226713838|sp|B6HZK5|QUEA_ECOSE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|229598026|sp|B1XEZ3|QUEA_ECODH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|259551445|sp|C4ZTG2|QUEA_ECOBW RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|12513255|gb|AAG54752.1|AE005220_1 synthesis of queuine in tRNA; probably S-adenosylmethionine:tRNA
ribosyltransferase-isomerase [Escherichia coli O157:H7
str. EDL933]
gi|147485|gb|AAA16114.1| queuosine biosynthesis [Escherichia coli]
gi|1773089|gb|AAB40161.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli]
gi|1786606|gb|AAC73508.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli str. K-12 substr. MG1655]
gi|13359913|dbj|BAB33879.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Escherichia coli O157:H7 str. Sakai]
gi|24050570|gb|AAN42000.1| probable S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Shigella flexneri 2a str. 301]
gi|30040144|gb|AAP15877.1| probable S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Shigella flexneri 2a str. 2457T]
gi|73854451|gb|AAZ87158.1| synthesis of queuine in tRNA; probably S-adenosylmethionine:tRNA
ribosyltransferase-isomerase [Shigella sonnei Ss046]
gi|81239838|gb|ABB60548.1| probable S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Shigella dysenteriae Sd197]
gi|85674545|dbj|BAE76185.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli str. K12 substr. W3110]
gi|110613975|gb|ABF02642.1| probably S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Shigella flexneri 5 str. 8401]
gi|157065605|gb|ABV04860.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli HS]
gi|157076746|gb|ABV16454.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli E24377A]
gi|169887826|gb|ACB01533.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli str. K-12 substr. DH10B]
gi|170123178|gb|EDS92109.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
albertii TW07627]
gi|187768305|gb|EDU32149.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4196]
gi|188015855|gb|EDU53977.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4113]
gi|188490163|gb|EDU65266.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 53638]
gi|188999361|gb|EDU68347.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4076]
gi|189355981|gb|EDU74400.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4401]
gi|189362534|gb|EDU80953.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4486]
gi|189368104|gb|EDU86520.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4501]
gi|189373513|gb|EDU91929.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC869]
gi|189377399|gb|EDU95815.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC508]
gi|194422207|gb|EDX38209.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 101-1]
gi|208727852|gb|EDZ77453.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4206]
gi|208732638|gb|EDZ81326.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4045]
gi|208737273|gb|EDZ84957.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4042]
gi|209161696|gb|ACI39129.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4115]
gi|209744174|gb|ACI70394.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Escherichia coli]
gi|209744176|gb|ACI70395.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Escherichia coli]
gi|209744178|gb|ACI70396.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Escherichia coli]
gi|209744180|gb|ACI70397.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Escherichia coli]
gi|209744182|gb|ACI70398.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Escherichia coli]
gi|209910876|dbj|BAG75950.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli SE11]
gi|217320652|gb|EEC29076.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. TW14588]
gi|238863509|gb|ACR65507.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli BW2952]
gi|242376183|emb|CAQ30874.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli BL21(DE3)]
gi|253325654|gb|ACT30256.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Escherichia
coli 'BL21-Gold(DE3)pLysS AG']
gi|253972372|gb|ACT38043.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli B str. REL606]
gi|253976582|gb|ACT42252.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli BL21(DE3)]
gi|254590986|gb|ACT70347.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. TW14359]
gi|257752274|dbj|BAI23776.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O26:H11 str. 11368]
gi|260450408|gb|ACX40830.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Escherichia
coli DH1]
gi|281599737|gb|ADA72721.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
flexneri 2002017]
gi|290761182|gb|ADD55143.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O55:H7 str. CB9615]
gi|291433717|gb|EFF06690.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli B185]
gi|300315342|gb|EFJ65126.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 175-1]
gi|300414601|gb|EFJ97911.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 115-1]
gi|300419577|gb|EFK02888.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 182-1]
gi|300452497|gb|EFK16117.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 116-1]
gi|300461873|gb|EFK25366.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 187-1]
gi|300527142|gb|EFK48211.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 119-7]
gi|300843396|gb|EFK71156.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 78-1]
gi|301074521|gb|EFK89327.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 146-1]
gi|306907722|gb|EFN38224.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Escherichia
coli W]
gi|308924570|gb|EFP70065.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
dysenteriae 1617]
gi|309700667|emb|CBI99963.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli ETEC H10407]
gi|310337148|gb|EFQ02286.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 1827-70]
gi|313646978|gb|EFS11435.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
flexneri 2a str. 2457T]
gi|315059682|gb|ADT74009.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli W]
gi|315135087|dbj|BAJ42246.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli DH1]
gi|315616655|gb|EFU97272.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 3431]
gi|320192818|gb|EFW67458.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC1212]
gi|320638394|gb|EFX08108.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. G5101]
gi|320643774|gb|EFX12897.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H- str. 493-89]
gi|320649125|gb|EFX17703.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H- str. H 2687]
gi|320656018|gb|EFX23934.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O55:H7 str. 3256-97 TW 07815]
gi|320661168|gb|EFX28599.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O55:H7 str. USDA 5905]
gi|320665144|gb|EFX32237.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. LSU-61]
gi|323152127|gb|EFZ38420.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli EPECa14]
gi|323164196|gb|EFZ50003.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
sonnei 53G]
gi|323170486|gb|EFZ56136.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli LT-68]
gi|323184769|gb|EFZ70140.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 1357]
gi|323379752|gb|ADX52020.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Escherichia
coli KO11]
gi|323938590|gb|EGB34839.1| tRNA ribosyltransferase-isomerase [Escherichia coli E1520]
gi|323943211|gb|EGB39367.1| tRNA ribosyltransferase-isomerase [Escherichia coli E482]
gi|323945306|gb|EGB41362.1| tRNA ribosyltransferase-isomerase [Escherichia coli H120]
gi|323963391|gb|EGB58953.1| tRNA ribosyltransferase-isomerase [Escherichia coli H489]
gi|323972255|gb|EGB67465.1| tRNA ribosyltransferase-isomerase [Escherichia coli TA007]
gi|323976114|gb|EGB71207.1| tRNA ribosyltransferase-isomerase [Escherichia coli TW10509]
gi|324116889|gb|EGC10802.1| tRNA ribosyltransferase-isomerase [Escherichia coli E1167]
gi|326341165|gb|EGD64957.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. 1044]
gi|331037719|gb|EGI09939.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli H736]
gi|331065978|gb|EGI37862.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli TA271]
gi|331076130|gb|EGI47412.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli H591]
gi|332103903|gb|EGJ07249.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
sp. D9]
Length = 356
Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 145/363 (39%), Positives = 207/363 (57%), Gaps = 27/363 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R S RL+ +L P H +DL LN D +
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLL----SLDGPTGALTHGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + R SK K G
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEVLVERMLDDKRILAHIRASKAPKPG--AELLL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARKRPIDAR 175
D +S + AT+ + +F + ER + + +G +PLPPYI RP +
Sbjct: 110 GDDES-INATMTARHGA-----LFEVE-FNDERSVLDILNSIGHMPLPPYI--DRPDEDA 160
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+
Sbjct: 161 DRELYQTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTI 220
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFT 293
+DHIMHSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T
Sbjct: 221 EDHIMHSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDT 280
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFI PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD
Sbjct: 281 QIFIYPGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDA 340
Query: 354 SLL 356
+
Sbjct: 341 MFI 343
>gi|94501955|ref|ZP_01308463.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
[Oceanobacter sp. RED65]
gi|94425897|gb|EAT10897.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
[Oceanobacter sp. RED65]
Length = 353
Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 144/360 (40%), Positives = 201/360 (55%), Gaps = 23/360 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F F+LP IA P R S+RL+ V+ S I + D+ A + D +V
Sbjct: 1 MKTSDFHFELPQELIAQYPPKERTSSRLLCVNSE-SGRADIQHKVFKDILAEVQPGDLMV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVS----PNSWSVYARPSKVIKKGDILH 116
FNNT+VI A+L G EKE L + + ++ V+ + S+ K G +
Sbjct: 60 FNNTRVIPARLFG---------EKESGGKLEVLIERMTGTDTALVHMKSSRSPKPGSTIT 110
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
L+ +V + + L +L + VG +PLPPY+ R+ R+
Sbjct: 111 L------EGLKVSVEGRQDALFELKFHLAPDQDLVHWLEQVGHMPLPPYMEREDEDSDRE 164
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT Y + G+VAAPTAGLHF LL+ L G+ + FVTLHVGAGTF PVKV+D +
Sbjct: 165 R--YQTVYNEKPGAVAAPTAGLHFDDALLNALKDKGVGIAFVTLHVGAGTFQPVKVDDVN 222
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+H MHSE + T +A+ K+ G ++++VGTTS+R LETA ++ G I P+ G T IF
Sbjct: 223 EHKMHSEYLEVSEETCEAIRKTKALGKKVIAVGTTSVRSLETA-SQSGEIQPYQGDTEIF 281
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+F+ VD L++NFHLP+STL+MLVSAF G Y A+ YRF+SYGD LL
Sbjct: 282 IYPGYQFKTVDRLLTNFHLPESTLIMLVSAFVGRGPILNAYDEAVREQYRFFSYGDAMLL 341
>gi|255535319|ref|YP_003095690.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Flavobacteriaceae bacterium 3519-10]
gi|255341515|gb|ACU07628.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Flavobacteriaceae bacterium 3519-10]
Length = 349
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 139/364 (38%), Positives = 196/364 (53%), Gaps = 22/364 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F+F LP +A P RD A+LMV+ I D+ + + D +
Sbjct: 1 MKTSDFNFHLPEELLAEHPSEHRDDAKLMVLDRKTQT---IEHKTFKDVVDYFDEKDLFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREK-----EISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
FNNTKV A+L G +EK E+ + W V P++ I+ G+ L
Sbjct: 58 FNNTKVFPARLYG-------NKEKTGAKIEVFLLRELDKETRVWDVLVDPARKIRIGNKL 110
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPID 173
FF++D L A VID + L F G E ++ +G PLP YI KR ++
Sbjct: 111 -FFTED--ESLVAEVIDNTTSRGRTLRFLYDGSYEEFRTKLKELGETPLPKYI--KRDVE 165
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT YAK +G+VAAPTAGLHF+ +L+ +L GI VTLHVG GTF P++VE
Sbjct: 166 PEDAERYQTIYAKHEGAVAAPTAGLHFSRHLMKKLEIKGIDFAEVTLHVGLGTFNPIEVE 225
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
D H M SE ID A +N + R+ +VGTT++R LET+ + + I P+ G+T
Sbjct: 226 DLSKHKMESEEAIIDQLNADIINKAVAEQRRVCAVGTTTMRALETSVSSNKKIGPYHGWT 285
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
N FI P + F + +++NFH PKSTLLM+++AF G + Y+ AI + Y+FYSYGD
Sbjct: 286 NKFIFPPHDFGVANAMITNFHTPKSTLLMMIAAFAGKDFLMHAYEEAIKNEYKFYSYGDA 345
Query: 354 SLLF 357
L+
Sbjct: 346 MLIL 349
>gi|254361281|ref|ZP_04977424.1| queuine tRNA-ribosyltransferase [Mannheimia haemolytica PHL213]
gi|153092777|gb|EDN73820.1| queuine tRNA-ribosyltransferase [Mannheimia haemolytica PHL213]
Length = 361
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 144/371 (38%), Positives = 210/371 (56%), Gaps = 36/371 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +F F+LP IA P R ++RL+ ++ +D DL +N D ++
Sbjct: 1 MLVSDFHFNLPDELIARYPTAERSASRLLHLNGETGE---FADQQFVDLYDHINEGDLLI 57
Query: 61 FNNTKVITAQLNGVR------FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
FNNT+VI A+L G + + R E C H++ S K K+G
Sbjct: 58 FNNTRVIPARLYGRKPSGGKVEALVERVLDEHRCLAHVKAS-----------KAPKEGAE 106
Query: 115 LHFFSQD--GQSR-LEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARK 169
L F +D G+ + AT++ + +T LVF+ EL +Q G +PLPPYI
Sbjct: 107 L-IFGEDKLGEGKGFTATMVARHDT-LFELVFNEEQPLFELLQQ---AGHMPLPPYI--D 159
Query: 170 RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
RP + D YQT Y+K+ G+VAAPTAGLHF + +L +L + G+ FVTLHVGAGTF P
Sbjct: 160 RPDEDADQERYQTVYSKVLGAVAAPTAGLHFDNAMLEKLKAKGVDTAFVTLHVGAGTFQP 219
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT---EDG-I 285
V+VE +DH MH+E + + + K++G R++++GTTS+R +E+A +DG +
Sbjct: 220 VRVETIEDHKMHAEYAEVSQEVVDKILATKAKGKRVIAIGTTSVRSVESAAQAAEKDGKL 279
Query: 286 INPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAY 345
I P+ T IF+ PG F+ +D L++NFHLP+STL+MLVSAF G T Y HA+ Y
Sbjct: 280 IAPFFSDTAIFLYPGKTFKVIDALVTNFHLPESTLIMLVSAFAGYRNTMNAYAHAVETKY 339
Query: 346 RFYSYGDTSLL 356
RF+SYGD +
Sbjct: 340 RFFSYGDAMFI 350
>gi|261491895|ref|ZP_05988473.1| queuine tRNA-ribosyltransferase [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261494438|ref|ZP_05990925.1| queuine tRNA-ribosyltransferase [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261309923|gb|EEY11139.1| queuine tRNA-ribosyltransferase [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261312442|gb|EEY13567.1| queuine tRNA-ribosyltransferase [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 361
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 144/371 (38%), Positives = 210/371 (56%), Gaps = 36/371 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +F F+LP IA P R ++RL+ ++ +D DL +N D ++
Sbjct: 1 MLVSDFHFNLPDELIARYPTAERSASRLLHLNGETG---EFADQQFVDLYDHINEGDLLI 57
Query: 61 FNNTKVITAQLNGVR------FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
FNNT+VI A+L G + + R E C H++ S K K+G
Sbjct: 58 FNNTRVIPARLYGRKPSGGKVEALVERVLDEHCCLAHVKAS-----------KAPKEGAE 106
Query: 115 LHFFSQD--GQSR-LEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARK 169
L F +D G+ + AT++ + +T LVF+ EL +Q G +PLPPYI
Sbjct: 107 L-IFGEDKLGEGKGFTATMVARHDT-LFELVFNEDQPLFELLQQ---AGHMPLPPYI--D 159
Query: 170 RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
RP + D YQT Y+K+ G+VAAPTAGLHF + +L +L + G+ FVTLHVGAGTF P
Sbjct: 160 RPDEDADQERYQTVYSKVLGAVAAPTAGLHFDNAMLEKLKAKGVDTAFVTLHVGAGTFQP 219
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT---EDG-I 285
V+VE +DH MH+E + + + K++G R++++GTTS+R +E+A +DG +
Sbjct: 220 VRVETIEDHKMHAEYAEVSQEVVDKILATKAKGKRVIAIGTTSVRSVESAAQAAEKDGKL 279
Query: 286 INPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAY 345
I P+ T IF+ PG F+ +D L++NFHLP+STL+MLVSAF G T Y HA+ Y
Sbjct: 280 IAPFFSDTAIFLYPGKTFKVIDALVTNFHLPESTLIMLVSAFAGYRNTMNAYAHAVETKY 339
Query: 346 RFYSYGDTSLL 356
RF+SYGD +
Sbjct: 340 RFFSYGDAMFI 350
>gi|170682221|ref|YP_001742540.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli SMS-3-5]
gi|191166706|ref|ZP_03028533.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli B7A]
gi|193065228|ref|ZP_03046301.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli E22]
gi|194428822|ref|ZP_03061357.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli B171]
gi|218693866|ref|YP_002401533.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 55989]
gi|218698690|ref|YP_002406319.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli IAI39]
gi|218703687|ref|YP_002411206.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli UMN026]
gi|260842603|ref|YP_003220381.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O103:H2 str. 12009]
gi|293403524|ref|ZP_06647615.1| queA [Escherichia coli FVEC1412]
gi|293408551|ref|ZP_06652390.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli B354]
gi|298379136|ref|ZP_06989017.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli FVEC1302]
gi|300818272|ref|ZP_07098483.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 107-1]
gi|300900471|ref|ZP_07118638.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 198-1]
gi|300903331|ref|ZP_07121259.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 84-1]
gi|300936392|ref|ZP_07151320.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 21-1]
gi|301025430|ref|ZP_07188981.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 69-1]
gi|301301552|ref|ZP_07207687.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 124-1]
gi|309794871|ref|ZP_07689292.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 145-7]
gi|331651338|ref|ZP_08352363.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli M718]
gi|331661780|ref|ZP_08362703.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli TA143]
gi|331671953|ref|ZP_08372749.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli TA280]
gi|226736737|sp|B7NJ97|QUEA_ECO7I RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|226736739|sp|B7N8V7|QUEA_ECOLU RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|226736740|sp|B1LJF3|QUEA_ECOSM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|254764276|sp|B7L638|QUEA_ECO55 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|170519939|gb|ACB18117.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli SMS-3-5]
gi|190903217|gb|EDV62939.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli B7A]
gi|192927202|gb|EDV81823.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli E22]
gi|194413125|gb|EDX29412.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli B171]
gi|218350598|emb|CAU96288.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 55989]
gi|218368676|emb|CAR16416.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli IAI39]
gi|218430784|emb|CAR11658.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli UMN026]
gi|257757750|dbj|BAI29247.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O103:H2 str. 12009]
gi|284920212|emb|CBG33271.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 042]
gi|291429377|gb|EFF02397.1| queA [Escherichia coli FVEC1412]
gi|291471729|gb|EFF14212.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli B354]
gi|298280249|gb|EFI21753.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli FVEC1302]
gi|300355952|gb|EFJ71822.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 198-1]
gi|300396032|gb|EFJ79570.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 69-1]
gi|300404626|gb|EFJ88164.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 84-1]
gi|300458498|gb|EFK21991.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 21-1]
gi|300529163|gb|EFK50225.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 107-1]
gi|300843049|gb|EFK70809.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 124-1]
gi|308121524|gb|EFO58786.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 145-7]
gi|315256229|gb|EFU36197.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 85-1]
gi|320201646|gb|EFW76222.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli EC4100B]
gi|323160488|gb|EFZ46436.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli E128010]
gi|323965357|gb|EGB60815.1| tRNA ribosyltransferase-isomerase [Escherichia coli M863]
gi|327254723|gb|EGE66339.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli STEC_7v]
gi|331051079|gb|EGI23131.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli M718]
gi|331060202|gb|EGI32166.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli TA143]
gi|331070942|gb|EGI42301.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli TA280]
Length = 356
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 144/359 (40%), Positives = 206/359 (57%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R S RL+ +L P H +DL LN D +
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLL----SLDGPTGALTHGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + R SK K G
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEVLVERMLDDKRILAHIRASKAPKPG--AELLL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
D +S + AT+ + G + V + ++ +G +PLPPYI RP + D
Sbjct: 110 GDDES-INATMTARH--GALFEVEFNDDRSVLDILNSIGHMPLPPYI--DRPDEDADREL 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHI
Sbjct: 165 YQTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHI 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFI 297
MHSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 225 MHSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFI 284
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 285 YPGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFI 343
>gi|260771416|ref|ZP_05880341.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
furnissii CIP 102972]
gi|260613542|gb|EEX38736.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
furnissii CIP 102972]
Length = 352
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 140/365 (38%), Positives = 211/365 (57%), Gaps = 22/365 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P+ R ++RL+ + N + D D+ + +D +V
Sbjct: 1 MQVSDFHFELPDELIARYPMAERTASRLLQLDGNTG---ELVDGTFKDVLNCVEPDDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + +S + R SK K G L
Sbjct: 58 FNNTRVIPARMFGRKASG-----GKLEVLVERMLDEHSILAHVRCSKPPKPGTELFL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G++ V+D + + F+ + L+ ++ +G +PLPPYI RP + D Y
Sbjct: 110 -GENDEFHAVMDARHDALFEIRFTAETVVLD-ILNQIGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G++ +VTLHVGAGTF PV+V++ +DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDQALLEQIKAKGVEFAYVTLHVGAGTFQPVRVDNINDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-----INPWSGFTNI 295
H+E + A+ + K+RGGRI++VGTTS+R LE+A +D + + P+ G T I
Sbjct: 226 HAEYVEVPQEVVDAIAATKARGGRIIAVGTTSVRSLESA-AQDALKKGTELVPFFGDTEI 284
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGY ++ VD L++NFHLP+STL+MLVSAF G T Y HA+ YRF+SYGD ++
Sbjct: 285 FIYPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYAHTMAAYDHAVKQQYRFFSYGD-AM 343
Query: 356 LFQKR 360
+KR
Sbjct: 344 FIRKR 348
>gi|325498312|gb|EGC96171.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
fergusonii ECD227]
Length = 356
Score = 232 bits (592), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 145/363 (39%), Positives = 207/363 (57%), Gaps = 27/363 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R S RL+ +L P H +DL LN D +
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLL----SLDGPTGALTHGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + R SK K G
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEVLVERMLDDKRILAHIRASKAPKPG--AELLL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARKRPIDAR 175
D +S + AT+ + +F + ER + + +G +PLPPYI RP +
Sbjct: 110 GDDES-INATMTARHGA-----LFEVE-FNDERSVLDILNSIGHMPLPPYI--DRPDEDA 160
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+
Sbjct: 161 DRELYQTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTI 220
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFT 293
+DHIMHSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T
Sbjct: 221 EDHIMHSEYAEVPQDVVDAVLATKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDT 280
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFI PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD
Sbjct: 281 QIFIYPGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDA 340
Query: 354 SLL 356
+
Sbjct: 341 MFI 343
>gi|212692507|ref|ZP_03300635.1| hypothetical protein BACDOR_02003 [Bacteroides dorei DSM 17855]
gi|237709173|ref|ZP_04539654.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 9_1_42FAA]
gi|237724349|ref|ZP_04554830.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. D4]
gi|265752700|ref|ZP_06088269.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 3_1_33FAA]
gi|212664982|gb|EEB25554.1| hypothetical protein BACDOR_02003 [Bacteroides dorei DSM 17855]
gi|229437218|gb|EEO47295.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
dorei 5_1_36/D4]
gi|229456869|gb|EEO62590.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 9_1_42FAA]
gi|263235886|gb|EEZ21381.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 3_1_33FAA]
Length = 351
Score = 232 bits (592), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 135/365 (36%), Positives = 199/365 (54%), Gaps = 20/365 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P RD +RLMVVH + I + D+ + + D +
Sbjct: 1 MKLSQFKFKLPEDKIALHPAKYRDESRLMVVHKSTGK---IEHKVFKDILDYFDDKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRRE----KEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
FN+TKV A+L G + R E +E++ L + W V P++ I+ G+ L+
Sbjct: 58 FNDTKVFPARLYGNKEKTGARIEVFLLRELNEELRL------WDVLVDPARKIRIGNKLY 111
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDA 174
F D + A VID + L F G E ++ + +G PLP +I +RP++
Sbjct: 112 FGDDDS---MVAEVIDNTTSRGRTLRFLYDGSHDEFKKALYALGEAPLPSFI--RRPVEE 166
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D +QT +AK +G+V APTAGLHF+ L+ R+ GI FVT+H G G F + VED
Sbjct: 167 EDTERFQTIFAKNEGAVTAPTAGLHFSRELMKRMEIKGIDFAFVTMHAGLGNFREIDVED 226
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
H M SE +++A + +N+ K G I +VGTT +R +ETA DG + + G+TN
Sbjct: 227 LTKHKMDSEQMYVNADACRIVNNAKDEGKNICAVGTTVMRTIETAVGTDGHLKEFDGWTN 286
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
FI P Y F + +++NFHLP STLLMLV+A+ G + + Y A+ YRF +YGD
Sbjct: 287 KFIFPPYDFSVANSMVTNFHLPLSTLLMLVAAYGGYDLVMEAYHTALKEDYRFGTYGDAM 346
Query: 355 LLFQK 359
L+ K
Sbjct: 347 LILDK 351
>gi|188996184|ref|YP_001930435.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Sulfurihydrogenibium sp. YO3AOP1]
gi|226713853|sp|B2V7F8|QUEA_SULSY RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|188931251|gb|ACD65881.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Sulfurihydrogenibium sp. YO3AOP1]
Length = 336
Score = 232 bits (592), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 137/364 (37%), Positives = 187/364 (51%), Gaps = 37/364 (10%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+ LP IA P PRDS RLMV++ I + D+ +L D +V
Sbjct: 1 MKLSDFDYHLPKELIAKYPAQPRDSCRLMVLNRKDKT---IEHRIFRDVIDYLKPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGD------- 113
NNTKVI A+L G + + I L + N W + + +KK
Sbjct: 58 LNNTKVIPARLIGKK----EKTNANIEVFLLRPIEDNIWETLIKNVRRLKKNQKIIISDD 113
Query: 114 -ILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
+ F S+D + + I +++ + G +PLPPYI R+
Sbjct: 114 FYVEFLSKDDEK----------------AIVKIHSKDIKSDLEKYGHVPLPPYIEREDEE 157
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+DY YQT +A +GSVA+PTAGLHFT LL ++ G+ + ++TLHVG GTF PVK
Sbjct: 158 KDKDY--YQTVFADKEGSVASPTAGLHFTKELLEKIKEKGVNIAYITLHVGLGTFKPVKT 215
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
ED H MH E I T + + K +V+VGTT +R LET G GF
Sbjct: 216 EDITKHKMHEEYFTIPKETLEMIKKTKENKKSLVAVGTTVVRALETY----GKFGKTEGF 271
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFI P Y F+ VD L++NFHLPKSTLLMLVSAF + + Y A+ YRF+SYGD
Sbjct: 272 TDIFIYPPYEFKIVDKLITNFHLPKSTLLMLVSAFADRDFILRAYNGAVKEKYRFFSYGD 331
Query: 353 TSLL 356
L+
Sbjct: 332 AMLI 335
>gi|150003742|ref|YP_001298486.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
vulgatus ATCC 8482]
gi|254881029|ref|ZP_05253739.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 4_3_47FAA]
gi|294777441|ref|ZP_06742892.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
vulgatus PC510]
gi|319640036|ref|ZP_07994763.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 3_1_40A]
gi|166216700|sp|A6KZK0|QUEA_BACV8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|149932166|gb|ABR38864.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
vulgatus ATCC 8482]
gi|254833822|gb|EET14131.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 4_3_47FAA]
gi|294448509|gb|EFG17058.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
vulgatus PC510]
gi|317388314|gb|EFV69166.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 3_1_40A]
Length = 351
Score = 232 bits (592), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 135/365 (36%), Positives = 199/365 (54%), Gaps = 20/365 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P RD +RLMVVH + I + D+ + + D +
Sbjct: 1 MKLSQFKFKLPEDKIALHPAKYRDESRLMVVHKSTGK---IEHKVFKDILDYFDDKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRRE----KEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
FN+TKV A+L G + R E +E++ L + W V P++ I+ G+ L+
Sbjct: 58 FNDTKVFPARLYGNKEKTGARIEVFLLRELNEELRL------WDVLVDPARKIRIGNKLY 111
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDA 174
F D + A VID + L F G E ++ + +G PLP +I +RP++
Sbjct: 112 FGDDDS---MVAEVIDNTTSRGRTLRFLYDGSHDEFKKALYALGEAPLPSFI--RRPVEE 166
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D +QT +AK +G+V APTAGLHF+ L+ R+ GI FVT+H G G F + VED
Sbjct: 167 EDAERFQTIFAKNEGAVTAPTAGLHFSRELMKRMEIKGIDFAFVTMHAGLGNFREIDVED 226
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
H M SE +++A + +N+ K G I +VGTT +R +ETA DG + + G+TN
Sbjct: 227 LTKHKMDSEQMYVNADACRIVNNAKDEGKNICAVGTTVMRTIETAVGTDGHLKEFDGWTN 286
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
FI P Y F + +++NFHLP STLLMLV+A+ G + + Y A+ YRF +YGD
Sbjct: 287 KFIFPPYDFSVANSMVTNFHLPLSTLLMLVAAYGGYDLVMEAYHTALKEDYRFGTYGDAM 346
Query: 355 LLFQK 359
L+ K
Sbjct: 347 LILDK 351
>gi|307245625|ref|ZP_07527711.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|307254583|ref|ZP_07536416.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 9 str.
CVJ13261]
gi|307259037|ref|ZP_07540767.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 11 str. 56153]
gi|306853327|gb|EFM85546.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|306862471|gb|EFM94432.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 9 str.
CVJ13261]
gi|306866704|gb|EFM98562.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 11 str. 56153]
Length = 361
Score = 232 bits (592), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 144/370 (38%), Positives = 202/370 (54%), Gaps = 34/370 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +F FDLP IA P R ++RL+ ++ D SDL +N D ++
Sbjct: 1 MLVSDFHFDLPDELIARYPTEERTASRLLHLNGETGH---FEDKQFSDLLDQINEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCH------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
FNNT+VI A+L G + + R E C H+R S K K+G
Sbjct: 58 FNNTRVIPARLYGRKASGGKLEVLVERVLDEHRCLAHVRAS-----------KAPKEGAE 106
Query: 115 LHFFSQDGQSRL-EATVIDKWNTGEILLVFSISGIELERQISLV---GTIPLPPYIARKR 170
L G+ +L E T +F + E + L+ G +PLPPYI R
Sbjct: 107 LVL----GEDKLGEGNGFKAIMTARHDALFELHFNEEQPVFDLLQQAGHMPLPPYI--DR 160
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
P + D YQT Y+K+ G+VAAPTAGLHF + L +L + G+ + FVTLHVGAGTF PV
Sbjct: 161 PDEDADQERYQTVYSKVLGAVAAPTAGLHFDNPTLEKLKAKGVNIAFVTLHVGAGTFQPV 220
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGII 286
+V++ +H MH+E + + + K+ G R+++VGTTS+R +E+A E +I
Sbjct: 221 RVDNILEHKMHAEYAEVSQAVVDQILATKATGKRVIAVGTTSVRSIESAAQAAEKEGKLI 280
Query: 287 NPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYR 346
P+ T+IF+ PG FR VD L++NFHLP+STL+MLVSAF G T K YQHA+ YR
Sbjct: 281 APFFSDTSIFLYPGKTFRIVDALVTNFHLPESTLIMLVSAFAGYRNTMKAYQHAVEAKYR 340
Query: 347 FYSYGDTSLL 356
F+SYGD +
Sbjct: 341 FFSYGDAMFI 350
>gi|331681798|ref|ZP_08382431.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli H299]
gi|331081000|gb|EGI52165.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli H299]
Length = 356
Score = 232 bits (592), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 144/359 (40%), Positives = 206/359 (57%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R S RL+ +L P H +DL LN D +
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLL----SLDGPTGALTHGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + R SK K G
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEVLVERMLDDKRILAHIRASKAPKPG--AELLL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
D +S + AT+ + G + V + ++ +G +PLPPYI RP + D
Sbjct: 110 GDDES-INATMTARH--GALFEVEFNDDRSVLDILNSIGHMPLPPYI--DRPDEDADREL 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHI
Sbjct: 165 YQTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHI 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFI 297
MHSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 225 MHSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFI 284
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 285 YPGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKSAVEEKYRFFSYGDAMFI 343
>gi|187732638|ref|YP_001879112.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
boydii CDC 3083-94]
gi|238689510|sp|B2U4K6|QUEA_SHIB3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|187429630|gb|ACD08904.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
boydii CDC 3083-94]
Length = 356
Score = 232 bits (592), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 144/359 (40%), Positives = 206/359 (57%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R S RL+ +L P H +DL LN D +
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLL----SLDGPTGALTHGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + R SK K G
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEVLVERMLDDKRILAHIRASKAPKPG--AELLL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
D +S + AT+ + G + V + ++ +G +PLPPYI RP + D
Sbjct: 110 GDDES-INATMTARH--GALFEVEFNDDRSVLDILNSIGHMPLPPYI--DRPDEDADREL 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHI
Sbjct: 165 YQTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHI 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFI 297
MHSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 225 MHSEYAEVPQDMVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFI 284
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 285 YPGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFI 343
>gi|326346059|gb|EGD69798.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. 1125]
Length = 356
Score = 232 bits (592), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 145/363 (39%), Positives = 207/363 (57%), Gaps = 27/363 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R S RL+ +L P H +DL LN D +
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLL----SLDGPTGALTHGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + R SK K G
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEVLVERMLDDKRILAHIRASKAPKPG--AELLL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARKRPIDAR 175
D +S + AT+ + +F + ER + + +G +PLPPYI RP +
Sbjct: 110 GDDES-INATMTARHGA-----LFEVE-FNDERSVLDILNSIGHMPLPPYI--DRPDEDA 160
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+
Sbjct: 161 DRELYQTVYSEKPGAVAAPTAGLHFDELLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTI 220
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFT 293
+DHIMHSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T
Sbjct: 221 EDHIMHSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDT 280
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFI PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD
Sbjct: 281 QIFIYPGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDA 340
Query: 354 SLL 356
+
Sbjct: 341 MFI 343
>gi|218549935|ref|YP_002383726.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
fergusonii ATCC 35469]
gi|226736741|sp|B7LMI2|QUEA_ESCF3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|218357476|emb|CAQ90115.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
fergusonii ATCC 35469]
gi|324114624|gb|EGC08592.1| tRNA ribosyltransferase-isomerase [Escherichia fergusonii B253]
Length = 356
Score = 232 bits (592), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 144/359 (40%), Positives = 206/359 (57%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R S RL+ +L P H +DL LN D +
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLL----SLDGPTGALTHGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + R SK K G
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEVLVERMLDDKRILAHIRASKAPKPG--AELLL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
D +S + AT+ + G + V + ++ +G +PLPPYI RP + D
Sbjct: 110 GDDES-INATMTARH--GALFEVEFNDDRSVLDILNSIGHMPLPPYI--DRPDEDADREL 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHI
Sbjct: 165 YQTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHI 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFI 297
MHSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 225 MHSEYAEVPQDVVDAVLATKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFI 284
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 285 YPGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFI 343
>gi|167855507|ref|ZP_02478270.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
parasuis 29755]
gi|167853373|gb|EDS24624.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
parasuis 29755]
Length = 361
Score = 232 bits (592), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 142/370 (38%), Positives = 201/370 (54%), Gaps = 34/370 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ ++ N D +DL ++S D ++
Sbjct: 1 MRVTDFHFDLPDELIARYPTAERSASRLLYLNGNTG---EYQDQQFNDLLEHIHSGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCH------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
FNNT+VI A+L G + + R E C H+R SK K+
Sbjct: 58 FNNTRVIPARLYGRKASGGKLEVLVERVLDEHRCLAHIR-----------SSKAPKENAE 106
Query: 115 LHFFSQD--GQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKR 170
+ F +D G+ ++ + L F S +L +Q G +PLPPYI R
Sbjct: 107 I-FLGEDKLGEGNGFKAIMVARHDALFELKFEASQPLFDLLQQ---AGHMPLPPYI--DR 160
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
P + D YQT Y+K+ G+VAAPTAGLHF +L +L G++ FVTLHVGAGTF PV
Sbjct: 161 PDEDADQERYQTVYSKVLGAVAAPTAGLHFDHQMLQKLQEKGVQTAFVTLHVGAGTFQPV 220
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGII 286
+VE ++H MH+E + + + K++G R++ VGTTS+R +E+A E +I
Sbjct: 221 RVETIEEHKMHAEYAEVSQEVVDKILATKAQGKRVICVGTTSVRSIESAAQAAEKEGKLI 280
Query: 287 NPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYR 346
P+ T IF+ PG FR VD L++NFHLP+STL+MLVSAF G + YQHA+ YR
Sbjct: 281 APFYSDTAIFLYPGKTFRIVDALVTNFHLPESTLIMLVSAFAGFKNCMNAYQHAVESQYR 340
Query: 347 FYSYGDTSLL 356
F+SYGD +
Sbjct: 341 FFSYGDAMFI 350
>gi|26246410|ref|NP_752449.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli CFT073]
gi|227884587|ref|ZP_04002392.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 83972]
gi|300988043|ref|ZP_07178523.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 45-1]
gi|301049605|ref|ZP_07196556.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 185-1]
gi|29427792|sp|Q8FKC5|QUEA_ECOL6 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|26106808|gb|AAN78993.1|AE016756_176 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli CFT073]
gi|227838673|gb|EEJ49139.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 83972]
gi|300298598|gb|EFJ54983.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 185-1]
gi|300407595|gb|EFJ91133.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 45-1]
gi|307552310|gb|ADN45085.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli ABU 83972]
gi|315294216|gb|EFU53567.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 153-1]
Length = 356
Score = 232 bits (592), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 145/362 (40%), Positives = 205/362 (56%), Gaps = 31/362 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R S RL+ +L P H +DL LN D +
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLL----SLDGPTGALTHGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + R SK K G
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEVLVERMLDDKRILAHIRASKAPKPG--AELLL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISL------VGTIPLPPYIARKRPID 173
D +S + AT+ + ++ +E Q S+ +G +PLPPYI RP +
Sbjct: 110 GDDES-INATMTARHG--------ALFEVEFNDQRSVLDILNSIGHMPLPPYI--DRPDE 158
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+
Sbjct: 159 DADRELYQTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVD 218
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSG 291
+DHIMHSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P
Sbjct: 219 TIEDHIMHSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPLFD 278
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T IFI PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYG
Sbjct: 279 DTQIFIYPGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYG 338
Query: 352 DT 353
D
Sbjct: 339 DA 340
>gi|217421123|ref|ZP_03452628.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 576]
gi|217396535|gb|EEC36552.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 576]
Length = 360
Score = 232 bits (592), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 148/370 (40%), Positives = 207/370 (55%), Gaps = 33/370 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
+ + +FDFDLPP IA + R ++RL+ V + N S P + D ++LPA + D +
Sbjct: 2 LTLSDFDFDLPPELIAQTALPERSASRLLEVDNTNPSAPPRLVDRRFAELPACVAPGDLL 61
Query: 60 VFNNTKVITAQLNGVRFCH------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGD 113
VFN+TKV+ A+ G + I R E + +R S + P + D
Sbjct: 62 VFNDTKVLKARFFGRKASGGKIEVLIERVTGERTALAQIRASKSPP-----PGTTLTLAD 116
Query: 114 ILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
F R+E + ++L+ ER G +PLPPYI + D
Sbjct: 117 A---FDVTVGERVEPFFTLHFPDNCLVLI--------ERH----GRLPLPPYI--EHAPD 159
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
A D YQT +A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE
Sbjct: 160 AADETRYQTVFAANPGAVAAPTAGLHFDDAVLAALEARGVERATLTLHVGAGTFQPVRVE 219
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN-PWSGF 292
+ +H MHSE + + + + ++RGGR+++VGTTS+R LE A + P +
Sbjct: 220 NLAEHRMHSESYELTDALVEKIAATRARGGRVIAVGTTSMRALEAAARDAQAAGRPLAAT 279
Query: 293 ---TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
T+IFITPGYRFR VD L++NFHLPKSTLLMLVSAF GIE + Y+HAI YRF+S
Sbjct: 280 RAETDIFITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGIETIRAAYRHAIDARYRFFS 339
Query: 350 YGDTSLLFQK 359
YGD LL ++
Sbjct: 340 YGDAMLLTRR 349
>gi|126440122|ref|YP_001060337.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 668]
gi|126455279|ref|YP_001067597.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 1106a]
gi|226198380|ref|ZP_03793949.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei Pakistan 9]
gi|237813725|ref|YP_002898176.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei MSHR346]
gi|242314533|ref|ZP_04813549.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 1106b]
gi|254191552|ref|ZP_04898055.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei Pasteur 52237]
gi|254259794|ref|ZP_04950848.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 1710a]
gi|91207415|sp|Q3JNW2|QUEA_BURP1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|166216709|sp|A3NZ26|QUEA_BURP0 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|166216710|sp|A3NDB6|QUEA_BURP6 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|126219615|gb|ABN83121.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 668]
gi|126228921|gb|ABN92461.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 1106a]
gi|157939223|gb|EDO94893.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei Pasteur 52237]
gi|225929563|gb|EEH25581.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei Pakistan 9]
gi|237503197|gb|ACQ95515.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei MSHR346]
gi|242137772|gb|EES24174.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 1106b]
gi|254218483|gb|EET07867.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 1710a]
Length = 360
Score = 232 bits (591), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 145/364 (39%), Positives = 203/364 (55%), Gaps = 21/364 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
+ + +FDFDLPP IA + R ++RL+ V + N S P + D ++LPA + D +
Sbjct: 2 LTLSDFDFDLPPELIAQTALPERSASRLLEVDNTNPSAPPRLVDRRFAELPACVAPGDLL 61
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFN+TKV+ A+ G + +I + + R SK G L
Sbjct: 62 VFNDTKVLKARFFGRKASG-----GKIEVLIERVTGERTALAQIRASKSPPPGTTLTL-- 114
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ TV ++ L + +ER G +PLPPYI + DA D
Sbjct: 115 ---ADAFDVTVGERVEPFFTLHFPDDCLVLIERH----GRLPLPPYI--EHAPDAADETR 165
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H
Sbjct: 166 YQTVFAANPGAVAAPTAGLHFDDAVLAALEARGVERATLTLHVGAGTFQPVRVENLAEHR 225
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI----INPWSGFTNI 295
MHSE + + + + ++RGGR+++VGTTS+R LE A + + T+I
Sbjct: 226 MHSESYELTDALVEKIAATRARGGRVIAVGTTSMRALEAAARDAQAAGRPLAATRAETDI 285
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFR VD L++NFHLPKSTLLMLVSAF GIE + Y+HAI YRF+SYGD L
Sbjct: 286 FITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGIETIRAAYRHAIDARYRFFSYGDAML 345
Query: 356 LFQK 359
L ++
Sbjct: 346 LTRR 349
>gi|310822782|ref|YP_003955140.1| s-adenosylmethionine:tRNA ribosyltransferase-isomerase [Stigmatella
aurantiaca DW4/3-1]
gi|309395854|gb|ADO73313.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Stigmatella
aurantiaca DW4/3-1]
Length = 361
Score = 232 bits (591), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 139/367 (37%), Positives = 203/367 (55%), Gaps = 21/367 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHL-VSDLPAFLNSNDAIVF 61
+ ++DF+LP ++IA P+ RD++RLM V + +HL +DLP+ L D +V
Sbjct: 5 LSDYDFELPEAQIAQAPLGARDASRLMTVSRSTKA----CEHLRFADLPSLLRPGDVLVV 60
Query: 62 NNTKVITAQLNGVRFCHINRRE----KEISCTLHMRVSPN-----SWSVYARPSKVIKKG 112
N+ +VI A+L G + R E + + T+ W + SK +K G
Sbjct: 61 NDARVIPARLLGAKVGTGGRVELLVVRPAASTMTSAALSLAAEAMDWICLGQASKGLKPG 120
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
+ F LE ++ + + G L+ + G +PLPPYI R+
Sbjct: 121 AQVAFGGGLVGEVLEGLGGGEYR----VRFQAPPGGSLQALLEQAGRLPLPPYITRE--P 174
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
DA D YQT YA+ G+VAAPTAGLHF+ + L + G++ VTL VG GTF+PV+
Sbjct: 175 DAADAERYQTLYARAPGAVAAPTAGLHFSEAIFEALDARGVRRVTVTLDVGPGTFLPVRE 234
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSG 291
E+ D H MH E + TA +N+ ++ G R+V+VGTT +R LE AT G++ +G
Sbjct: 235 EELDRHKMHPERYGVPEQTAAEVNAARAEGRRVVAVGTTVVRTLEAATDPATGLLRAGTG 294
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T +FI PGY FR VD++++NFHLP+STL+MLVSA G E T YQ A+ YRF+SYG
Sbjct: 295 ETVLFIRPGYAFRQVDLMLTNFHLPRSTLVMLVSALLGREHTLAAYQEAVREGYRFFSYG 354
Query: 352 DTSLLFQ 358
D L+ +
Sbjct: 355 DAMLVTE 361
>gi|319775882|ref|YP_004138370.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae F3047]
gi|317450473|emb|CBY86690.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae F3047]
Length = 363
Score = 232 bits (591), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 139/364 (38%), Positives = 206/364 (56%), Gaps = 19/364 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+F+LP IA P R S RL+ ++ I SD+ ++ D ++
Sbjct: 1 MRVSDFNFNLPDELIARYPKTDRVSCRLLQLNGENG---EIFHRTFSDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + + R SK K+G L F +
Sbjct: 58 FNNTRVIPARMFGRKASG-----GKIEVLVERMLDEHRFLAHIRSSKSPKEGAEL-FLGE 111
Query: 121 D--GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
D G++ V+ ++ + S L + +G +PLP YI RP + D
Sbjct: 112 DKLGENNGIKAVMKARHSSLFEVELSDKSTALLDVLQTIGHMPLPLYI--DRPDEEADKE 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y+K+ G+VAAPTAGLHF LL +L G+ FVTLHVGAGTF PV+VE+ +DH
Sbjct: 170 CYQTVYSKVPGAVAAPTAGLHFDDPLLEKLKKKGVNFEFVTLHVGAGTFQPVRVENIEDH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTED----GIINPWSGF 292
+MH+E + A+ + K G R+++VGTTS+R +E+A + E+ +I P+
Sbjct: 230 VMHAEYVEVSQEVCNAIIATKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSD 289
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + T Y+HA+ YRF+SYGD
Sbjct: 290 TSIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKHAVQEKYRFFSYGD 349
Query: 353 TSLL 356
+
Sbjct: 350 AMFI 353
>gi|53720476|ref|YP_109462.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei K96243]
gi|254299192|ref|ZP_04966642.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 406e]
gi|81607721|sp|Q63R06|QUEA_BURPS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|52210890|emb|CAH36878.1| putative queuosine S-adenosylmethionine:tRNA
ribosyltransferase-isomerase [Burkholderia pseudomallei
K96243]
gi|157808970|gb|EDO86140.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 406e]
Length = 360
Score = 232 bits (591), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 145/364 (39%), Positives = 203/364 (55%), Gaps = 21/364 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
+ + +FDFDLPP IA + R ++RL+ V + N S P + D ++LPA + D +
Sbjct: 2 LTLSDFDFDLPPELIAQTALPERSASRLLEVDNTNPSAPPRLVDRRFAELPACVAPGDLL 61
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFN+TKV+ A+ G + +I + + R SK G L
Sbjct: 62 VFNDTKVLKARFFGRKASG-----GKIEVLIERVTGERTALAQIRASKSPPPGTTLTL-- 114
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ TV ++ L + +ER G +PLPPYI + DA D
Sbjct: 115 ---ADAFDVTVGERVEPFFTLHFPDDCLVLIERH----GRLPLPPYI--EHAPDAADETR 165
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H
Sbjct: 166 YQTVFAANPGAVAAPTAGLHFDDAVLTALEARGVERATLTLHVGAGTFQPVRVENLAEHR 225
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI----INPWSGFTNI 295
MHSE + + + + ++RGGR+++VGTTS+R LE A + + T+I
Sbjct: 226 MHSESYELTDALVEKIAATRARGGRVIAVGTTSMRALEAAARDAQAAGRPLAATRAETDI 285
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFR VD L++NFHLPKSTLLMLVSAF GIE + Y+HAI YRF+SYGD L
Sbjct: 286 FITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGIETIRAAYRHAIDARYRFFSYGDAML 345
Query: 356 LFQK 359
L ++
Sbjct: 346 LTRR 349
>gi|317051041|ref|YP_004112157.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfurispirillum indicum S5]
gi|316946125|gb|ADU65601.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfurispirillum indicum S5]
Length = 339
Score = 232 bits (591), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 138/353 (39%), Positives = 205/353 (58%), Gaps = 21/353 (5%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
++ D+P IA P+ RD++RL+V+ L+ P ++ + S L +L D +VFN+T
Sbjct: 7 DYHVDIPAELIAQEPLAQRDASRLLVLSRALA-PAIVGESTFSRLSEYLRPGDLLVFNDT 65
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQS 124
+VI A+L G + + L +P W V R K++ G ++H DG
Sbjct: 66 RVIPARLKGRKSTG-----GAVEIFLVEPCAPRCWRVLTRGKKLVP-GTLVHI--GDG-- 115
Query: 125 RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTY 184
+EA VI++ + + FS+ ++++ G IPLPPYI KR D+RD YQ+ +
Sbjct: 116 -VEA-VIEERDGEMAVARFSVD----DQELFACGAIPLPPYI--KREADSRDNQRYQSVF 167
Query: 185 AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEI 244
A G+VAAPTA LHFTS ++ L G++ +TLHVG GTF+PVK E D+H MHSE
Sbjct: 168 AARDGAVAAPTASLHFTSAIVEGLRQRGVRTATITLHVGLGTFLPVKSERIDEHRMHSEH 227
Query: 245 GFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFR 304
+ A T + + GGR+++VGTT +R LE+ + G T+IFI PGY F
Sbjct: 228 FHVPAQTLDLVADTRRSGGRVIAVGTTVVRALESCFGHTPLRT--GGSTDIFIRPGYSFA 285
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+D +++NFHLP STL++LVSAF G E +++YQ+A+S YRF+SYGD L
Sbjct: 286 VIDGMVTNFHLPDSTLILLVSAFYGRENIQQIYQYAVSQRYRFFSYGDGMLFL 338
>gi|194432534|ref|ZP_03064820.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
dysenteriae 1012]
gi|194419095|gb|EDX35178.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
dysenteriae 1012]
gi|320181613|gb|EFW56528.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
boydii ATCC 9905]
gi|332085662|gb|EGI90826.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
dysenteriae 155-74]
gi|332094555|gb|EGI99601.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
boydii 5216-82]
Length = 356
Score = 232 bits (591), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 143/359 (39%), Positives = 206/359 (57%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R S RL+ +L P H +DL LN D +
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLL----SLDGPTGALTHGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + R SK K G
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEVLVERMLDDKRILAHIRASKAPKPG--AELLL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
D +S + AT+ + G + V + ++ +G +PLPPYI RP + D
Sbjct: 110 GDDES-INATMTARH--GALFEVEFNDDRSVLDILNSIGHMPLPPYI--DRPDEDADREL 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHI
Sbjct: 165 YQTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHI 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFI 297
MHSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 225 MHSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFI 284
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PG++++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 285 YPGFQYKVIDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFI 343
>gi|261822535|ref|YP_003260641.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pectobacterium wasabiae WPP163]
gi|261606548|gb|ACX89034.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Pectobacterium wasabiae WPP163]
Length = 355
Score = 232 bits (591), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 149/362 (41%), Positives = 209/362 (57%), Gaps = 25/362 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLV-SDLPAFLNSNDAI 59
M V +F F+LP S IA P R RL+ +L P H V +DL LN D +
Sbjct: 1 MRVADFSFELPESLIAHYPQAERSGCRLL----SLDGPTGNLTHGVFTDLLEKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G R + E + L R + R SK K G L
Sbjct: 57 VFNNTRVIPARLFG-RKASGGKLEVLVERVLDDR----RVLAHVRASKAPKPGTEL--LL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISL---VGTIPLPPYIARKRPIDARD 176
D +S ++AT+ + + +F + + +S+ +G +PLPPYI RP + D
Sbjct: 110 GDDES-VKATMAARHDA-----LFELHFDDARDVLSILNAIGHMPLPPYI--DRPDEDAD 161
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT Y++ G+VAAPTAGLHF +L+ L GI++ FVTLHVGAGTF PV+V+ +
Sbjct: 162 RELYQTVYSQRPGAVAAPTAGLHFDEPMLAALREKGIEMAFVTLHVGAGTFQPVRVDTIE 221
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTN 294
DHIMH+E + A+ + K+RG R+++VGTTS+R LE+A ++D I P+ T
Sbjct: 222 DHIMHAEYAEVPQDVVDAVLACKARGNRVIAVGTTSVRSLESAAQASQDAPIAPFFDDTK 281
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PGY +R +D L++NFHLP+STL+MLVSAF G + T Y+ A++ YRF+SYGD
Sbjct: 282 IFIYPGYHYRIIDALVTNFHLPESTLIMLVSAFAGYQNTMSAYREAVAEQYRFFSYGDAM 341
Query: 355 LL 356
+
Sbjct: 342 FI 343
>gi|238787973|ref|ZP_04631769.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
frederiksenii ATCC 33641]
gi|238723921|gb|EEQ15565.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
frederiksenii ATCC 33641]
Length = 363
Score = 232 bits (591), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 153/355 (43%), Positives = 213/355 (60%), Gaps = 29/355 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P R RL+ +L P + H + +DL L D +
Sbjct: 6 MRVADFSFELPESLIAHYPQPQRSGCRLL----SLDGPTGMLTHGIFTDLLDKLEPGDLL 61
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSV-YARPSKVIKKGDILHFF 118
VFNNT+VI A+L G R + E L RV +S + + + SK K G L
Sbjct: 62 VFNNTRVIPARLFG-RKASGGKLE-----VLVERVLDDSRVLAHIKASKAPKPGTEL--L 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARKRPIDA 174
D +S + AT++ + +T +F + + ER + +LVG +PLPPYI RP +
Sbjct: 114 LGDDES-IRATMLARHDT-----LFELR-FDDERDVFTILNLVGHMPLPPYI--DRPDED 164
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D YQT Y++ G+VAAPTAGLHF LL+ L GI++ FVTLHVGAGTF PV+V+
Sbjct: 165 ADRELYQTVYSQRPGAVAAPTAGLHFDEPLLAALRDKGIEMAFVTLHVGAGTFQPVRVDT 224
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGF 292
++HIMHSE + A+ + K+RG R+V+VGTTS+R LE+A +E+G+I+P+ G
Sbjct: 225 IEEHIMHSEYAEVPQEVVDAVLACKARGNRVVAVGTTSVRSLESAARASENGLISPFFGD 284
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
T IFI PGY ++ VD L++NFHLP+STL+MLVSAF G + T YQ A++ YRF
Sbjct: 285 TRIFIYPGYHYQVVDALVTNFHLPESTLIMLVSAFAGYKNTMNAYQQAVAEQYRF 339
>gi|205351716|ref|YP_002225517.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Gallinarum str. 287/91]
gi|226713850|sp|B5R6Q6|QUEA_SALG2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|205271497|emb|CAR36315.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Gallinarum str. 287/91]
gi|326626749|gb|EGE33092.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Gallinarum str. 9]
Length = 354
Score = 232 bits (591), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 145/359 (40%), Positives = 205/359 (57%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAI 59
M V +F F+LP S IA P R RL+ +L P ++ +DL LN D +
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLL----SLEGPTGALTHGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEVLVERMLDDKRILAHIRASKAPKPGTEL--LL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
D +S + AT+ + G + V + ++ +G +PLPPYI RP + D
Sbjct: 110 GDDES-IHATMTARH--GALFEVEFNDPRPVLDILNAIGHMPLPPYI--DRPDEDADREL 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y++ G+VAAPTAGLHF LL+ L GI++ FVTLHVGAGTF PV+V+ +DHI
Sbjct: 165 YQTVYSEKPGAVAAPTAGLHFDEPLLAALREKGIEMAFVTLHVGAGTFQPVRVDTIEDHI 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFI 297
MHSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P G T IFI
Sbjct: 225 MHSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPLFGDTQIFI 284
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 285 YPGYQYKVIDALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQKYRFFSYGDAMFI 343
>gi|165976181|ref|YP_001651774.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 3 str. JL03]
gi|226713832|sp|B0BP45|QUEA_ACTPJ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|165876282|gb|ABY69330.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 3 str. JL03]
Length = 361
Score = 232 bits (591), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 144/370 (38%), Positives = 201/370 (54%), Gaps = 34/370 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +F FDLP IA P R ++RL+ ++ D DL +N D ++
Sbjct: 1 MLVSDFHFDLPDELIARYPTEERTASRLLHLNGETGH---FEDKQFFDLLDQINEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCH------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
FNNT+VI A+L G + + R E C H+R S K K+G
Sbjct: 58 FNNTRVIPARLYGRKASGGKLEVLVERVLDEHRCLAHVRAS-----------KAPKEGAE 106
Query: 115 LHFFSQDGQSRL-EATVIDKWNTGEILLVFSISGIELERQISLV---GTIPLPPYIARKR 170
L G+ +L E T +F + E + L+ G +PLPPYI R
Sbjct: 107 LVL----GEDKLGEGNGFKAIMTARHDALFELHFNEEQPVFDLLQQAGHMPLPPYI--DR 160
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
P + D YQT Y+K+ G+VAAPTAGLHF + L +L + G+ + FVTLHVGAGTF PV
Sbjct: 161 PDEDADQERYQTVYSKVLGAVAAPTAGLHFDNPTLEKLKAKGVNIAFVTLHVGAGTFQPV 220
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGII 286
+V++ DH MH+E + + + K+ G R+++VGTTS+R +E+A E +I
Sbjct: 221 RVDNILDHKMHAEYAEVSQAVVDQILATKATGKRVIAVGTTSVRSIESAAQAAEKEGKLI 280
Query: 287 NPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYR 346
P+ T+IF+ PG FR VD L++NFHLP+STL+MLVSAF G T K YQHA+ YR
Sbjct: 281 APFFSDTSIFLYPGKTFRVVDALVTNFHLPESTLIMLVSAFAGYRNTMKAYQHAVEAKYR 340
Query: 347 FYSYGDTSLL 356
F+SYGD +
Sbjct: 341 FFSYGDAMFI 350
>gi|153001324|ref|YP_001367005.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
baltica OS185]
gi|160875993|ref|YP_001555309.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
baltica OS195]
gi|217972746|ref|YP_002357497.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
baltica OS223]
gi|304411825|ref|ZP_07393436.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Shewanella
baltica OS183]
gi|307303407|ref|ZP_07583162.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Shewanella
baltica BA175]
gi|166216752|sp|A6WQ53|QUEA_SHEB8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|189038878|sp|A9KUN1|QUEA_SHEB9 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|254764287|sp|B8EDJ6|QUEA_SHEB2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|151365942|gb|ABS08942.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Shewanella
baltica OS185]
gi|160861515|gb|ABX50049.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Shewanella
baltica OS195]
gi|217497881|gb|ACK46074.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Shewanella
baltica OS223]
gi|304349685|gb|EFM14092.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Shewanella
baltica OS183]
gi|306913767|gb|EFN44189.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Shewanella
baltica BA175]
gi|315268189|gb|ADT95042.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Shewanella
baltica OS678]
Length = 345
Score = 232 bits (591), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 140/360 (38%), Positives = 198/360 (55%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R+++RL+ + N + D +DL +N D +V
Sbjct: 1 MRVADFSFDLPDELIARYPMAQRNASRLLTLDGNSGA---LGDKQFTDLLGMINPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + + R SK K ++
Sbjct: 58 FNNTRVIPARMFGQKAS-----GGKLEILVERMLDDKRILAHVRSSKSPKVDSLILL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DG +++ LL LE VG +PLPPYI RP + D Y
Sbjct: 110 DGGYQMKMVARHDTLFELELLSELTILEVLE----AVGHMPLPPYI--DRPDEDADKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF +L L + G+ + FVTLHVGAGTF PV+V+ +H M
Sbjct: 164 QTVYNQNPGAVAAPTAGLHFDDAMLDALKAKGVNIAFVTLHVGAGTFQPVRVDTILEHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFITP 299
HSE + + K+ G R+V+VGTTS+R LE+A G + +SG T+IFI P
Sbjct: 224 HSEWANVPQDVVDLIAQTKAAGKRVVAVGTTSVRSLESAARASQGELKAFSGDTDIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY+F+ VD +++NFHLP+STL+MLVSAF G + YQHAI+ YRF+SYGD + +K
Sbjct: 284 GYQFQVVDAMVTNFHLPESTLIMLVSAFAGFDHVMAAYQHAIAQKYRFFSYGDAMFVTKK 343
>gi|322419806|ref|YP_004199029.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Geobacter
sp. M18]
gi|320126193|gb|ADW13753.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Geobacter
sp. M18]
Length = 341
Score = 232 bits (591), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 139/356 (39%), Positives = 198/356 (55%), Gaps = 22/356 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+DLPP IA P RD++RL+ + + + + V+ + + + D +V
Sbjct: 1 MRLSDFDYDLPPELIAQHPASRRDASRLLTLDRSNGA---VGETTVAAIASRFRAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS---WSVYARPSKVIKKGDILHF 117
N+T+VI A+L G + + +R P WS + SK K G
Sbjct: 58 LNDTRVIPARLKG------QKESGGAAEVFLVRRVPGDAEIWSCLIKASKSPKDGT--RI 109
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+G + ATV+ + GE ++F + + G++PLPPYI KR D
Sbjct: 110 ILPEG---VTATVVSR-EEGEWQVLFQ-GCDDFMCWLEGAGSMPLPPYI--KRAPAGEDL 162
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT +A+ +G+VAAPTAGLHFT +L + G+++ VTLHVG GTFMPV+VE+
Sbjct: 163 ERYQTVFAREKGAVAAPTAGLHFTPEILDEIRGRGVEIAPVTLHVGLGTFMPVRVEELSR 222
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH E+ I TA+A+ +S GGR++++GTTSLR LE A G + +IFI
Sbjct: 223 HTMHRELYRIPEATARAIRRTRSAGGRVIALGTTSLRALEHAAA-SGELAAGEREADIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
PGYRFR VD L++NFHLPKSTL MLV AF G E Y+ A+ +RF+SYGD
Sbjct: 282 LPGYRFRVVDALITNFHLPKSTLFMLVCAFAGKEVMLDAYREAVERRFRFFSYGDA 337
>gi|121600954|ref|YP_991656.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia mallei SAVP1]
gi|124383619|ref|YP_001027151.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia mallei NCTC 10229]
gi|126449230|ref|YP_001082100.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia mallei NCTC 10247]
gi|167000544|ref|ZP_02266356.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia mallei PRL-20]
gi|254178811|ref|ZP_04885465.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia mallei ATCC 10399]
gi|166216706|sp|A3MPB4|QUEA_BURM7 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|166216707|sp|A2S5D2|QUEA_BURM9 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|166216708|sp|A1V0A3|QUEA_BURMS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|121229764|gb|ABM52282.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia mallei SAVP1]
gi|124291639|gb|ABN00908.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia mallei NCTC 10229]
gi|126242100|gb|ABO05193.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia mallei NCTC 10247]
gi|160694725|gb|EDP84733.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia mallei ATCC 10399]
gi|243063598|gb|EES45784.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia mallei PRL-20]
Length = 360
Score = 232 bits (591), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 148/370 (40%), Positives = 207/370 (55%), Gaps = 33/370 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
+ + +FDFDLPP IA + R ++RL+ V + N S P + D ++LPA + D +
Sbjct: 2 LTLSDFDFDLPPELIAQTALPERSASRLLEVDNTNPSAPPRLIDRRFAELPACVAPGDLL 61
Query: 60 VFNNTKVITAQLNGVRFCH------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGD 113
VFN+TKV+ A+ G + I R E + +R S + P + D
Sbjct: 62 VFNDTKVLKARFFGRKASGGKIEVLIERVTGERTALAQIRASKSPP-----PGTTLTLAD 116
Query: 114 ILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
F R+E + ++L+ ER G +PLPPYI + D
Sbjct: 117 A---FDVTVGERVEPFFTLHFPDNCLVLI--------ERH----GRLPLPPYI--EHAPD 159
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
A D YQT +A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE
Sbjct: 160 AADETRYQTVFAANPGAVAAPTAGLHFDDAVLAALEARGVERATLTLHVGAGTFQPVRVE 219
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN-PWSGF 292
+ +H MHSE + + + + ++RGGR+++VGTTS+R LE A + P +
Sbjct: 220 NLAEHRMHSESYELTDALVEKIAATRARGGRVIAVGTTSMRALEAAARDAQAAGRPLAAT 279
Query: 293 ---TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
T+IFITPGYRFR VD L++NFHLPKSTLLMLVSAF GIE + Y+HAI YRF+S
Sbjct: 280 RAETDIFITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGIETIRAAYRHAIDARYRFFS 339
Query: 350 YGDTSLLFQK 359
YGD LL ++
Sbjct: 340 YGDAMLLTRR 349
>gi|167551789|ref|ZP_02345542.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA29]
gi|205323457|gb|EDZ11296.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA29]
Length = 354
Score = 232 bits (591), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 146/359 (40%), Positives = 204/359 (56%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P R RL+ +L P H +DL LN D +
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLL----SLEGPTGALTHGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEVLVERMLDDKRILAHIRASKAPKPGTEL--LL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
D +S + AT+ + G + V + ++ +G +PLPPYI RP + D
Sbjct: 110 GDDES-IHATMTARH--GALFEVEFNDPRPVLDILNAIGHMPLPPYI--DRPDEDADREL 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y++ G+VAAPTAGLHF LL+ L GI++ FVTLHVGAGTF PV+V+ +DHI
Sbjct: 165 YQTVYSEKPGAVAAPTAGLHFDEPLLAALREKGIEMAFVTLHVGAGTFQPVRVDTIEDHI 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFI 297
MHSE + A+ + K+RG R+++VGTTS+R LE+A + +I P+ G T IFI
Sbjct: 225 MHSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKSDLIEPFFGDTQIFI 284
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 285 YPGYQYKVIDALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQKYRFFSYGDAMFI 343
>gi|320173777|gb|EFW48960.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
dysenteriae CDC 74-1112]
Length = 356
Score = 231 bits (590), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 143/359 (39%), Positives = 207/359 (57%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R S RL+ +L P ++ +DL LN D +
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLL----SLDGPTGALTYGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + R SK K G
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEVLVERMLDDKRILAHIRASKAPKPG--AELLL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
D +S + AT+ + G + V + ++ +G +PLPPYI RP + D
Sbjct: 110 GDDES-INATMTARH--GALFEVEFNDDRSVLDILNSIGHMPLPPYI--DRPDEDADREL 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHI
Sbjct: 165 YQTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHI 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFI 297
MHSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 225 MHSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFI 284
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 285 YPGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFI 343
>gi|168237515|ref|ZP_02662573.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
SL480]
gi|194733996|ref|YP_002113436.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
CVM19633]
gi|238689775|sp|B4TZH8|QUEA_SALSV RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|194709498|gb|ACF88719.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
CVM19633]
gi|197289460|gb|EDY28823.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
SL480]
Length = 354
Score = 231 bits (590), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 146/359 (40%), Positives = 204/359 (56%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P R RL+ +L P H +DL LN D +
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLL----SLEGPTGALTHGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEVLVERMLDDKRILAHIRASKAPKPGTEL--LL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
D +S + AT+ + G + V + ++ +G +PLPPYI RP + D
Sbjct: 110 GDDES-IHATMTARH--GALFEVEFNDPRPVLDILNAIGHMPLPPYI--DRPDEDADREL 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y++ G+VAAPTAGLHF LL+ L GI++ FVTLHVGAGTF PV+V+ +DHI
Sbjct: 165 YQTVYSEKPGAVAAPTAGLHFDEPLLAALREKGIEMAFVTLHVGAGTFQPVRVDTIEDHI 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFI 297
MHSE + A+ + K+RG R+++VGTTS+R LE+A + +I P+ G T IFI
Sbjct: 225 MHSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKSDLIEPFFGDTQIFI 284
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 285 YPGYQYKVIDALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQKYRFFSYGDAMFI 343
>gi|77165122|ref|YP_343647.1| queuosine biosynthesis protein [Nitrosococcus oceani ATCC 19707]
gi|254434710|ref|ZP_05048218.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Nitrosococcus oceani AFC27]
gi|91207387|sp|Q3JAM9|QUEA_NITOC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|76883436|gb|ABA58117.1| Queuosine biosynthesis protein [Nitrosococcus oceani ATCC 19707]
gi|207091043|gb|EDZ68314.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Nitrosococcus oceani AFC27]
Length = 344
Score = 231 bits (590), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 135/361 (37%), Positives = 199/361 (55%), Gaps = 20/361 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F ++LP IA P R +RL+ + ++ D +LP L++ D ++
Sbjct: 1 MQLSDFTYNLPKQLIAQYPPKRRGESRLLSLE---GASGIVKDRQFIELPELLSTKDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A++ G + +I + + + + R + + G L
Sbjct: 58 FNNTKVIPARIQGTKDSG-----GKIEILIERFLDQHRALAHIRANNPPRAGRRLVM--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKR-PIDARDYVD 179
+ +E V K E+ + + L + + +G +PLPPYI RK P+D Y
Sbjct: 110 --EQSVEVEV--KGRVKELFELRFLDPRPLPQLLEAIGQMPLPPYIQRKTVPVDKERY-- 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
QT YA G+VAAPTAGLHF LL RL + GI+ ++TLHVGAGTF PV+V++ H
Sbjct: 164 -QTIYASRPGAVAAPTAGLHFDKPLLKRLQAQGIRSGYITLHVGAGTFQPVRVKNITQHQ 222
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE + + + GGR+V+VGTT++R LE A+ + G+I P+ G T IFI P
Sbjct: 223 MHSEYVEVSEQICAQIRDTQQAGGRVVAVGTTTVRALEAASAK-GVIAPYQGETEIFIFP 281
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
G+RF V+ L++NFHLP++TLLMLV AF G E Y+HAI YRF+SYGD + +
Sbjct: 282 GHRFHTVNALITNFHLPETTLLMLVCAFAGSEHVLAAYRHAIKKGYRFFSYGDAMFITEA 341
Query: 360 R 360
+
Sbjct: 342 K 342
>gi|327483527|gb|AEA77934.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase [Vibrio
cholerae LMA3894-4]
Length = 351
Score = 231 bits (590), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 141/366 (38%), Positives = 208/366 (56%), Gaps = 32/366 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N S LV D D+ + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPKAERTASRLLQLDGN-SGQLV--DGTFKDVLELVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + ++ + R SK K G L+
Sbjct: 58 FNNTRVIPARMFGRKASG-----GKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGEN 112
Query: 121 DG-----QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
D Q+R +A ++ ++L ++ +G +PLPPYI RP +
Sbjct: 113 DEFHAVMQARHDALFEIRFTAETVVLDI----------LNQIGHMPLPPYI--DRPDEET 160
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y + G+VAAPTAGLHF LL ++ + G+++ +VTLHVGAGTF PV+VE+
Sbjct: 161 DKERYQTVYNQKPGAVAAPTAGLHFDQALLEQIQAKGVELAYVTLHVGAGTFQPVRVENI 220
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-----INPWS 290
DH MH+E + A+ + K+R GR+V+VGTTS+R LE+A +D + + P+
Sbjct: 221 HDHHMHAEYVEVPQEVVDAITATKAR-GRVVAVGTTSVRSLESA-AQDALQKGTELKPFF 278
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G T IFI PGY+++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ YRF+SY
Sbjct: 279 GDTEIFIFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYEHTMAAYEHAVKEQYRFFSY 338
Query: 351 GDTSLL 356
GD +
Sbjct: 339 GDAMFI 344
>gi|307610728|emb|CBX00335.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Legionella
pneumophila 130b]
Length = 337
Score = 231 bits (590), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 140/357 (39%), Positives = 204/357 (57%), Gaps = 20/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F FDLP IA P+ R +RL++ + + ++ FL D +V
Sbjct: 1 MNKQDFYFDLPSELIAQYPLANRSDSRLLIYNRQTE---EYGHYQFREIADFLQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N++KVI A+L G + ++ + ++ + + SK +K D+++
Sbjct: 58 MNDSKVIPARLYGHK-----ATGGKVELLVERITGDFTFLAHIKASKSLKSNDLIYL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D RLE V+ + + L + + ++ +G IPLPPYI R+ ++ D Y
Sbjct: 110 DAAKRLE--VLQRQDD----LFLCKASENILDLLNDLGHIPLPPYIDRED--ESLDKERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GSVAAPTAGLHF +LS + + G+ + +VTLHVGAGTF PV+ E DH M
Sbjct: 162 QTVYAKCAGSVAAPTAGLHFDDAVLSSIRARGVNIAYVTLHVGAGTFRPVRCERIQDHKM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + KS G R+++VGTT+LR LE+A +I P S T+IFI PG
Sbjct: 222 HSEWFTVSPDLCTAVKAAKSMGNRVIAVGTTALRSLESAAMGGELI-PCSRDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ D L++NFHLP+STL+MLVSAF G +E +YQ AI+ YRF+SYGD SLL
Sbjct: 281 YQFKVCDGLITNFHLPESTLVMLVSAFIGHQECMALYQEAIAKRYRFFSYGDASLLL 337
>gi|32034120|ref|ZP_00134352.1| COG0809: S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
(queuine synthetase) [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|126208243|ref|YP_001053468.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae L20]
gi|166216694|sp|A3N0C7|QUEA_ACTP2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|126097035|gb|ABN73863.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 5b str. L20]
Length = 361
Score = 231 bits (590), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 144/370 (38%), Positives = 201/370 (54%), Gaps = 34/370 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +F FDLP IA P R ++RL+ ++ D DL +N D ++
Sbjct: 1 MLVSDFHFDLPDELIARYPTEERTASRLLHLNGETGH---FEDKQFFDLLDQINEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCH------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
FNNT+VI A+L G + + R E C H+R S K K+G
Sbjct: 58 FNNTRVIPARLYGRKASGGKLEILVERVLDEHRCLAHVRAS-----------KAPKEGAE 106
Query: 115 LHFFSQDGQSRL-EATVIDKWNTGEILLVFSISGIELERQISLV---GTIPLPPYIARKR 170
L G+ +L E T +F + E + L+ G +PLPPYI R
Sbjct: 107 LVL----GEDKLGEGNGFKAIMTARHDALFELHFNEEQPLFDLLQQAGHMPLPPYI--DR 160
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
P + D YQT Y+K+ G+VAAPTAGLHF + L +L + G+ + FVTLHVGAGTF PV
Sbjct: 161 PDEDADQERYQTVYSKVLGAVAAPTAGLHFDNPTLEKLKAKGVNIAFVTLHVGAGTFQPV 220
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGII 286
+V++ DH MH+E + + + K+ G R+++VGTTS+R +E+A E +I
Sbjct: 221 RVDNILDHKMHAEYAEVSQAVVDQILATKATGKRVIAVGTTSVRSIESAAQAAEKEGKLI 280
Query: 287 NPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYR 346
P+ T+IF+ PG FR VD L++NFHLP+STL+MLVSAF G T K YQHA+ YR
Sbjct: 281 TPFFSDTSIFLYPGKTFRIVDALVTNFHLPESTLIMLVSAFAGYRNTMKAYQHAVEAKYR 340
Query: 347 FYSYGDTSLL 356
F+SYGD +
Sbjct: 341 FFSYGDAMFI 350
>gi|193068706|ref|ZP_03049667.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli E110019]
gi|192958069|gb|EDV88511.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli E110019]
Length = 356
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 144/359 (40%), Positives = 205/359 (57%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R S RL+ +L P H +DL LN D +
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLL----SLDGPTGALTHGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + I + + + R SK K G
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GTIEVLVERMLDDKRILAHIRASKAPKPG--AELLL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
D +S + AT+ + G + V + ++ +G +PLPPYI RP + D
Sbjct: 110 GDDES-INATMTARH--GALFEVEFNDDRSVLDILNSIGHMPLPPYI--DRPDEDADREL 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHI
Sbjct: 165 YQTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHI 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFI 297
MHSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 225 MHSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFI 284
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 285 YPGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFI 343
>gi|224370223|ref|YP_002604387.1| QueA [Desulfobacterium autotrophicum HRM2]
gi|223692940|gb|ACN16223.1| QueA [Desulfobacterium autotrophicum HRM2]
Length = 352
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 145/363 (39%), Positives = 206/363 (56%), Gaps = 24/363 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++ ++LP RIA P RD +RL+ + ++ H DL LN +D +V N
Sbjct: 4 LSDYCYNLPQERIAQTPCQQRDGSRLLRLDRKSG---DVTHHGFQDLVTLLNPDDLLVIN 60
Query: 63 NTKVITAQL------NGVRFCHINRREKEISCTLHMRVSPNSW---SVYARPSKVIKKGD 113
NT+V+ A+L GV I ++C ++ N + R SK K G
Sbjct: 61 NTRVVPARLMGKKTTGGVIEVMIVDYAAGLNC-----LAGNGYFQCDCLVRASKSPKIGA 115
Query: 114 ILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
+L + +R++A G L FS +G ++ + I G +PLPPYI R ++
Sbjct: 116 VLEL-GDEITARVQA-----RKGGLFELKFSCAG-DVVQAIKRHGQLPLPPYIHRTNGLE 168
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D DYQT YA +G+VAAPTAGLHFT L+ L + GI+ +TLHVG GTF+PV+V+
Sbjct: 169 PGDETDYQTVYAANEGAVAAPTAGLHFTDTLMETLRAKGIEFCEITLHVGYGTFVPVRVD 228
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
D +H +H E I A A+N K G R+V+VGTTS+R LE E G+I+P SG
Sbjct: 229 DIREHQIHRESFEISEAAAAAVNRAKKAGRRVVAVGTTSVRTLEYGADETGLIHPGSGVC 288
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
++FI PGYRF+ +D +++NFHLP+STLLMLVSAF G + + Y AI YRF+SYGD
Sbjct: 289 DLFIYPGYRFKLIDAMITNFHLPESTLLMLVSAFAGKDPIFRAYGAAIQSNYRFFSYGDA 348
Query: 354 SLL 356
L+
Sbjct: 349 MLI 351
>gi|113461459|ref|YP_719528.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
somnus 129PT]
gi|170718434|ref|YP_001783652.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
somnus 2336]
gi|123132213|sp|Q0I4R7|QUEA_HAES1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|189038526|sp|B0UWJ9|QUEA_HAES2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|112823502|gb|ABI25591.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
somnus 129PT]
gi|168826563|gb|ACA31934.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Haemophilus somnus 2336]
Length = 356
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 135/364 (37%), Positives = 208/364 (57%), Gaps = 19/364 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F FDLP IA P R S+R++ ++ + SD+ +N D ++
Sbjct: 1 MYLSDFYFDLPDELIARYPKRERSSSRMLQLNGQNGE---LFHRTFSDVADLINEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + ++ + + + R SK K+ +L F +
Sbjct: 58 FNNTRVIPARMFGRKASG-----GKIEVLVERVLNEHHFLAHIRSSKSPKENTVL-FLGE 111
Query: 121 D--GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
D G+ + ++ + L S L + +G +PLPPYI RP + D
Sbjct: 112 DKLGEGKGVEMLMKARHENLFELELSDKSTALLDILQKIGHMPLPPYI--DRPDEDADKE 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y K+ G+VAAPTAGLHF LL++L + G+ FVTLHVGAGTF PV+VE+ +DH
Sbjct: 170 RYQTVYNKVPGAVAAPTAGLHFDDELLTQLKNKGVNFAFVTLHVGAGTFQPVRVENIEDH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDG----IINPWSGF 292
MH+E + A+ + K++G R+++VGTTS+R +E+A E+ ++ P+
Sbjct: 230 KMHAEYVEVPQEVVDAVLATKAKGKRVIAVGTTSVRSIESAALFAEENNSTHLLEPYFSD 289
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFI PG +FR +D L++NFHLP+STL+MLVSAF G + T Y+ A+ + YRF+SYGD
Sbjct: 290 TSIFIYPGKKFRVIDCLITNFHLPESTLIMLVSAFAGYQHTMNAYKSAVENRYRFFSYGD 349
Query: 353 TSLL 356
+
Sbjct: 350 AMFI 353
>gi|76810830|ref|YP_334741.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 1710b]
gi|76580283|gb|ABA49758.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 1710b]
Length = 372
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 146/364 (40%), Positives = 204/364 (56%), Gaps = 21/364 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
+ + +FDFDLPP IA + R ++RL+ V + N S P + D ++LPA + D +
Sbjct: 14 LTLSDFDFDLPPELIAQTALPERSASRLLEVDNTNPSAPPRLVDRRFAELPACVAPGDLL 73
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFN+TKV+ A+ G + +I + + R SK G L
Sbjct: 74 VFNDTKVLKARFFGRKASG-----GKIEVLIERVTGERTALAQIRASKSPPPGTTLTL-- 126
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ TV ++ L + +ER G +PLPPYI + DA D
Sbjct: 127 ---ADAFDVTVGERVEPFFTLHFPDDCLVLIERH----GRLPLPPYI--EHAPDAADETR 177
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H
Sbjct: 178 YQTVFAANPGAVAAPTAGLHFDDAVLAALEARGVERATLTLHVGAGTFQPVRVENLAEHR 237
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN-PWSGF---TNI 295
MHSE + + + + ++RGGR+++VGTTS+R LE A + P + T+I
Sbjct: 238 MHSESYELTDALVEKIAATRARGGRVIAVGTTSMRALEAAARDAQAAGRPLAATRAETDI 297
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFR VD L++NFHLPKSTLLMLVSAF GIE + Y+HAI YRF+SYGD L
Sbjct: 298 FITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGIETIRAAYRHAIDARYRFFSYGDAML 357
Query: 356 LFQK 359
L ++
Sbjct: 358 LTRR 361
>gi|190150095|ref|YP_001968620.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase
[Actinobacillus pleuropneumoniae serovar 7 str. AP76]
gi|307256789|ref|ZP_07538568.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 10 str. D13039]
gi|307261247|ref|ZP_07542922.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 12 str. 1096]
gi|307263429|ref|ZP_07545045.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 13 str. N273]
gi|238692337|sp|B3GXL9|QUEA_ACTP7 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|189915226|gb|ACE61478.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase
[Actinobacillus pleuropneumoniae serovar 7 str. AP76]
gi|306864837|gb|EFM96741.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 10 str. D13039]
gi|306868978|gb|EFN00780.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 12 str. 1096]
gi|306871307|gb|EFN03035.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 13 str. N273]
Length = 361
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 144/370 (38%), Positives = 201/370 (54%), Gaps = 34/370 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +F FDLP IA P R ++RL+ ++ D DL +N D ++
Sbjct: 1 MLVSDFHFDLPDELIARYPTEERTASRLLHLNGETGH---FEDKQFFDLLDQINEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCH------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
FNNT+VI A+L G + + R E C H+R S K K+G
Sbjct: 58 FNNTRVIPARLYGRKASGGKLEVLVERVLDEHRCLAHVRAS-----------KAPKEGAE 106
Query: 115 LHFFSQDGQSRL-EATVIDKWNTGEILLVFSISGIELERQISLV---GTIPLPPYIARKR 170
L G+ +L E T +F + E + L+ G +PLPPYI R
Sbjct: 107 LVL----GEDKLGEGNGFKAIMTARHDALFELHFNEEQPVFDLLQQAGHMPLPPYI--DR 160
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
P + D YQT Y+K+ G+VAAPTAGLHF + L +L + G+ + FVTLHVGAGTF PV
Sbjct: 161 PDEDADQERYQTVYSKVLGAVAAPTAGLHFDNPTLEKLKAKGVNIAFVTLHVGAGTFQPV 220
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGII 286
+V++ DH MH+E + + + K+ G R+++VGTTS+R +E+A E +I
Sbjct: 221 RVDNILDHKMHAEYAEVSQAVVDQILATKATGKRVIAVGTTSVRSIESAAQAAEKEGKLI 280
Query: 287 NPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYR 346
P+ T+IF+ PG FR VD L++NFHLP+STL+MLVSAF G T K YQHA+ YR
Sbjct: 281 APFFSDTSIFLYPGKTFRIVDALVTNFHLPESTLIMLVSAFAGYRNTMKAYQHAVEAKYR 340
Query: 347 FYSYGDTSLL 356
F+SYGD +
Sbjct: 341 FFSYGDAMFI 350
>gi|16763784|ref|NP_459399.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|161615412|ref|YP_001589377.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Paratyphi B str. SPB7]
gi|167992250|ref|ZP_02573348.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar 4,[5],12:i:- str.
CVM23701]
gi|168232374|ref|ZP_02657432.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Kentucky str. CDC 191]
gi|168240223|ref|ZP_02665155.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL486]
gi|168465490|ref|ZP_02699372.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Newport str. SL317]
gi|194449792|ref|YP_002044438.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL476]
gi|194471655|ref|ZP_03077639.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Kentucky str. CVM29188]
gi|197263896|ref|ZP_03163970.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA23]
gi|238911462|ref|ZP_04655299.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Tennessee str.
CDC07-0191]
gi|21263884|sp|Q8ZRD9|QUEA_SALTY RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|189038877|sp|A9MX31|QUEA_SALPB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|238693641|sp|B4T8P4|QUEA_SALHS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|16418908|gb|AAL19358.1| S-adenosylmethionine-tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|161364776|gb|ABX68544.1| hypothetical protein SPAB_03183 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194408096|gb|ACF68315.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL476]
gi|194458019|gb|EDX46858.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Kentucky str. CVM29188]
gi|195631754|gb|EDX50274.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Newport str. SL317]
gi|197242151|gb|EDY24771.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA23]
gi|205329469|gb|EDZ16233.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar 4,[5],12:i:- str.
CVM23701]
gi|205333419|gb|EDZ20183.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Kentucky str. CDC 191]
gi|205340375|gb|EDZ27139.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL486]
gi|261245687|emb|CBG23483.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhimurium str.
D23580]
gi|267992113|gb|ACY86998.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhimurium str.
14028S]
gi|301157016|emb|CBW16499.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhimurium str.
SL1344]
gi|312911437|dbj|BAJ35411.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhimurium str.
T000240]
gi|321225129|gb|EFX50190.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhimurium str.
TN061786]
gi|322614687|gb|EFY11616.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
315996572]
gi|322618793|gb|EFY15681.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-1]
gi|322623500|gb|EFY20339.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-3]
gi|322629202|gb|EFY25981.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-4]
gi|322631922|gb|EFY28676.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-1]
gi|322637340|gb|EFY34042.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-2]
gi|322642026|gb|EFY38636.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str. 531954]
gi|322647845|gb|EFY44320.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|322652522|gb|EFY48876.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
OH_2009072675]
gi|322653315|gb|EFY49648.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|322660536|gb|EFY56772.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str. 19N]
gi|322664688|gb|EFY60881.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
81038-01]
gi|322669259|gb|EFY65409.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
MD_MDA09249507]
gi|322670805|gb|EFY66938.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str. 414877]
gi|322678957|gb|EFY75012.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str. 366867]
gi|322681985|gb|EFY78010.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str. 413180]
gi|322685186|gb|EFY81183.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str. 446600]
gi|323128722|gb|ADX16152.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhimurium str. 4/74]
gi|323194466|gb|EFZ79661.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
609458-1]
gi|323196998|gb|EFZ82140.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
556150-1]
gi|323203982|gb|EFZ88999.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str. 609460]
gi|323206932|gb|EFZ91885.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
507440-20]
gi|323210850|gb|EFZ95722.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str. 556152]
gi|323214540|gb|EFZ99291.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB101509-0077]
gi|323223097|gb|EGA07440.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB102109-0047]
gi|323227047|gb|EGA11228.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB110209-0055]
gi|323230136|gb|EGA14256.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB111609-0052]
gi|323233874|gb|EGA17963.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009083312]
gi|323238432|gb|EGA22490.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009085258]
gi|323244120|gb|EGA28129.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
315731156]
gi|323246280|gb|EGA30263.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2009159199]
gi|323251906|gb|EGA35769.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008282]
gi|323257903|gb|EGA41582.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008283]
gi|323261084|gb|EGA44676.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008284]
gi|323264986|gb|EGA48485.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008285]
gi|323272549|gb|EGA55956.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008287]
Length = 354
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 145/359 (40%), Positives = 204/359 (56%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P R RL+ +L P H +DL LN D +
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLL----SLEGPTGALTHGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEVLVERMLDDKRILAHIRASKAPKPGTEL--LL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
D +S + AT+ + G + V + ++ +G +PLPPYI RP + D
Sbjct: 110 GDDES-IHATMTARH--GALFEVEFNDPRPVLDILNAIGHMPLPPYI--DRPDEDADREL 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y++ G+VAAPTAGLHF LL+ L G+++ FVTLHVGAGTF PV+V+ +DHI
Sbjct: 165 YQTVYSEKPGAVAAPTAGLHFDEPLLAALREKGVEMAFVTLHVGAGTFQPVRVDTIEDHI 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFI 297
MHSE + A+ + K+RG R+++VGTTS+R LE+A + +I P+ G T IFI
Sbjct: 225 MHSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKSDLIEPFFGDTQIFI 284
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 285 YPGYQYKVIDALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQKYRFFSYGDAMFI 343
>gi|71065959|ref|YP_264686.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Psychrobacter arcticus 273-4]
gi|91207397|sp|Q4FRV6|QUEA_PSYA2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|71038944|gb|AAZ19252.1| probable S-adenosylmethionine:tRNA -ribosyltransferase-isomerase
[Psychrobacter arcticus 273-4]
Length = 403
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 145/386 (37%), Positives = 216/386 (55%), Gaps = 44/386 (11%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ V ++D++LP IA P+ R +++L+ + P + + D L S+LP LN+ D IV
Sbjct: 27 LSVDDYDYELPDQLIARYPLAQRSASKLLYL-PTNNANSQVEDKLFSELPDILNAGDLIV 85
Query: 61 FNNTKVITAQLNGVRFCH------INR--REKEISCTLHMRVSPNSWSVYARPSKVIKKG 112
FN+TKV+ A+L G + I R +++ + NS ++ + +I +
Sbjct: 86 FNDTKVMKARLFGQKDTGGKIEVLIERLVSLSDVNSAYLDEIIANSKTI---DTTIIAEK 142
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLV--------------- 157
I ++A+ K G +L ++GI + RQ +L
Sbjct: 143 HI-------ALCHIKASKALKLGQGLVLADGHMTGIMIGRQENLFILAFDTPILPDLEQY 195
Query: 158 GTIPLPPYIARKRPIDARDYVDYQTTY---AKIQGSVAAPTAGLHFTSNLLSRLISIGIK 214
G +P+PPY +R DA D YQT + AK+ SVAAPTA LHF +L +L + GI+
Sbjct: 196 GELPIPPYF--ERHADATDNTRYQTVFHDPAKL-ASVAAPTASLHFDDIVLEKLAAKGIQ 252
Query: 215 VYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLR 274
FVTLHVGAGTF PVK ++ +H MHSE + TA+ +N + G +++++GTT R
Sbjct: 253 TAFVTLHVGAGTFAPVKTDNLLNHTMHSEYAHLPQATAELINQTHANGKQVIAIGTTVTR 312
Query: 275 LLETATTEDGI----INPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGI 330
+LETA + + ++ WSG T+IFI PG++F VD L++NFHLPKSTLLMLVSAF
Sbjct: 313 VLETAYQQTAVDGQSLSGWSGDTDIFIYPGFKFGVVDKLLTNFHLPKSTLLMLVSAFATK 372
Query: 331 EETKKMYQHAISHAYRFYSYGDTSLL 356
+ ++ YQHAI YRF+SYGD LL
Sbjct: 373 KSIEQAYQHAIKSQYRFFSYGDAMLL 398
>gi|171910851|ref|ZP_02926321.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Verrucomicrobium spinosum DSM 4136]
Length = 324
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 137/357 (38%), Positives = 197/357 (55%), Gaps = 33/357 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+ +FD+ LP IA P+ R ++R++VVH I +DLP +L +D +V
Sbjct: 1 MLTSDFDYQLPEELIASEPLADRSASRMLVVHRESGT---IEHRSFTDLPKYLRPDDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A R+ + ++ + T +P W +P K ++ G + S
Sbjct: 58 LNDTRVLPA-----RYFSNDGTKELLRLTF---ATPTLWRCMVKPGKKLRVGHTIAIGSA 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G TV + + G+ L+ F E + G + LPPY+ R+ + D Y
Sbjct: 110 TG------TVKEIYENGDRLIEFDQMVDE-----AAFGHLALPPYMEREERTE--DKERY 156
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +AK +GS+AAPTAGLHFT LL+ + FVTLHVG GTF PVK + DH+M
Sbjct: 157 QTVFAKHEGSIAAPTAGLHFTPELLA-----SVPHTFVTLHVGVGTFQPVKADRITDHVM 211
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE F+ +AQ +N GR+++VGTT+ R+LE+ + G + G T+IFI P
Sbjct: 212 HSERYFLSEASAQRINE----AGRVIAVGTTATRVLESIAQKHGGLKAAEGETSIFIYPP 267
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y FR VD L++NFHLPKSTL+MLVSA G + + Y+ AI YRFYSYGD L+
Sbjct: 268 YEFRVVDALVTNFHLPKSTLMMLVSALAGKDLIFRAYEEAIRERYRFYSYGDCMLIL 324
>gi|117621432|ref|YP_856270.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
gi|166216695|sp|A0KJ19|QUEA_AERHH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|117562839|gb|ABK39787.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
Length = 355
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 137/365 (37%), Positives = 206/365 (56%), Gaps = 18/365 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R ++RL+ + + D+ LN D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPMTERTASRLLQLDGQTGA---LRHGQFVDVLDQLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + +S + R SK K G L
Sbjct: 58 FNNTRVIPARMFGQKASG-----GKLEVLVERMLDEHSVLAHVRSSKSPKPGTRLILDGG 112
Query: 121 DGQSRLEATVIDKWNT-GEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
++EA + + + EI + +E+ + +G +PLPPYI RP + D
Sbjct: 113 ADGEKVEAEMRARHDALFEIHFLDPRPVLEI---LEAIGHMPLPPYI--DRPDEDADKER 167
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y + G+VAAPTAGLHF LL ++ + G++ FVTLHVGAGTF PV+V+ +DH
Sbjct: 168 YQTVYNQKPGAVAAPTAGLHFDEPLLEKIRAKGVETAFVTLHVGAGTFQPVRVDKIEDHH 227
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT----TEDGIINPWSGFTNI 295
MHSE + A+ + ++RGGR+++VGTTS+R LE+A + + P+ T+I
Sbjct: 228 MHSEYAEVPQEVVDAIAATRARGGRVIAVGTTSVRSLESAAKVTLAQGKPLAPFFSDTDI 287
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGY+F+ VD +++NFHLP+STL+MLVSAF G + YQ A++ YRF+SYGD
Sbjct: 288 FIFPGYQFQVVDAMVTNFHLPESTLIMLVSAFAGYDNVMSAYQAAVAEQYRFFSYGDAMF 347
Query: 356 LFQKR 360
+ ++R
Sbjct: 348 VTRRR 352
>gi|307543992|ref|YP_003896471.1| S-adenosylmethionine:tRNAribosyltransferase-isome rase [Halomonas
elongata DSM 2581]
gi|307216016|emb|CBV41286.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase [Halomonas
elongata DSM 2581]
Length = 359
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 146/363 (40%), Positives = 202/363 (55%), Gaps = 29/363 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F ++LP + IA P R RL+ V + +L L D +V
Sbjct: 1 MQRADFHYELPEALIARYPSEQRSDCRLLCVD---GASGALDHRRFPELIDKLEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L+G + + L + + + R SK K G L F +
Sbjct: 58 FNDTRVIPARLHGHKASG-----GRVEMLLERPLDAHRGLAHLRSSKSPKIGTELTF--E 110
Query: 121 DG-----QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
G + R EA + + GE L+ LER G +PLPPYI R + R
Sbjct: 111 GGIQAVVEGRREA-LFELRFLGETPLI-----ALLERH----GHMPLPPYITRDDELSDR 160
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
+ YQT YA+ G+VAAPTAGLHF LL RL + G++ FVTLHVGAGTF PV+V+D
Sbjct: 161 ER--YQTVYARRDGAVAAPTAGLHFDEPLLERLAAKGVESAFVTLHVGAGTFQPVRVDDI 218
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFT 293
+H MHSE + A + + + ++RG R+V+VGTTS+R LE+A+ + DG I P+SG T
Sbjct: 219 REHEMHSEWIEVSASVCEQVRAARARGNRVVAVGTTSVRCLESASLKSPDGDIAPYSGET 278
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PGY +R VD L++NFHLP+STLLMLVS+F G + Y+ A+ Y F+SYGD
Sbjct: 279 DIFIYPGYEWRVVDALVTNFHLPESTLLMLVSSFAGYDTVMAAYREAVQEGYAFFSYGDA 338
Query: 354 SLL 356
L
Sbjct: 339 MFL 341
>gi|56414441|ref|YP_151516.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Paratyphi A str. ATCC
9150]
gi|197363362|ref|YP_002142999.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Paratyphi A str.
AKU_12601]
gi|81599427|sp|Q5PFT5|QUEA_SALPA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|238689947|sp|B5BDC9|QUEA_SALPK RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|56128698|gb|AAV78204.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Paratyphi A str. ATCC
9150]
gi|197094839|emb|CAR60372.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Paratyphi A str.
AKU_12601]
Length = 354
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 145/359 (40%), Positives = 204/359 (56%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P R RL+ +L P H +DL LN D +
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLL----SLEGPTGALTHGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEVLVERMLDDKRILAHIRASKAPKPGTEL--LL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
D +S + AT+ + G + V + ++ +G +PLPPYI RP + D
Sbjct: 110 GDDES-IHATMTARH--GALFEVEFNDPRPVLDILNAIGHMPLPPYI--DRPDEDADREL 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y++ G+VAAPTAGLHF LL+ L G+++ FVTLHVGAGTF PV+V+ +DHI
Sbjct: 165 YQTVYSEKPGAVAAPTAGLHFDEPLLAALREKGVEMAFVTLHVGAGTFQPVRVDTIEDHI 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFI 297
MHSE + A+ + K+RG R+++VGTTS+R LE+A + +I P+ G T IFI
Sbjct: 225 MHSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKSDLIEPFFGDTQIFI 284
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 285 YPGYQYKVIDALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQKYRFFSYGDAMFI 343
>gi|206561641|ref|YP_002232406.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia cenocepacia J2315]
gi|238693122|sp|B4EE24|QUEA_BURCJ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|198037683|emb|CAR53626.1| putative queuosine S-adenosylmethionine:tRNA
ribosyltransferase-isomerase [Burkholderia cenocepacia
J2315]
Length = 355
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 144/361 (39%), Positives = 203/361 (56%), Gaps = 21/361 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LPP IA + R ++RL+ V ++ P + D ++LP+ + D +VFN
Sbjct: 4 LSDFDFNLPPELIAQTALPDRTASRLLEVDRSVE-PARLVDRHFAELPSCIAPGDLLVFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKV+ A RF +I + ++ R SK G L
Sbjct: 63 DTKVLKA-----RFFGQKASGGKIEVLIERVTGTHTALAQIRASKSPGAGTTLRL----- 112
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ TV ++ L F ++L I G +PLPPYI + DA D YQT
Sbjct: 113 ADAFDVTVGERVEPF-FTLHFPAPCLDL---IEQYGRLPLPPYI--EHDPDATDETRYQT 166
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA G+VAAPTAGLHF LL +L ++G++ +TLHVGAGTF PV+V++ +H MHS
Sbjct: 167 VYASNPGAVAAPTAGLHFDQPLLEQLDALGVERATLTLHVGAGTFQPVRVDNIAEHKMHS 226
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGF---TNIFIT 298
E + + + ++RGG +++VGTTS+R LE A + D P + T+IFIT
Sbjct: 227 EWYDLPQSLVDKIAATRARGGNVIAVGTTSMRALEAAARSADEAGRPLAATQAETDIFIT 286
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGYRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI YRF+SYGD LL +
Sbjct: 287 PGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIRAAYRHAIEERYRFFSYGDAMLLTR 346
Query: 359 K 359
+
Sbjct: 347 R 347
>gi|261212160|ref|ZP_05926446.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio sp.
RC341]
gi|260838768|gb|EEX65419.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio sp.
RC341]
Length = 352
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 136/366 (37%), Positives = 206/366 (56%), Gaps = 31/366 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N ++D D+ + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPKAERTASRLLQLDGNSGQ---LTDGTFKDVLGLVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + ++ + R SK K G L+
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGEN 112
Query: 121 DG-----QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
D Q+R +A ++ ++L ++ +G +PLPPYI RP +
Sbjct: 113 DEFHAVMQARHDALFEIRFTAETVVLDI----------LNQIGHMPLPPYI--DRPDEDA 160
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y + G+VAAPTAGLHF LL ++ + G+++ +VTLHVGAGTF PV+V++
Sbjct: 161 DKERYQTVYNQKPGAVAAPTAGLHFDQALLEQIQAKGVELAYVTLHVGAGTFQPVRVDNI 220
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-----INPWS 290
DH MH+E + A+ + K+RGGR+++VGTTS+R LE+A +D + + P+
Sbjct: 221 HDHHMHAEYVEVPQEVVDAVAATKARGGRVIAVGTTSVRSLESA-AQDALKKGTELKPFF 279
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G T IFI PGY++ VD L++NFHLP+STL+MLVSAF G T Y+HA+ YRF+SY
Sbjct: 280 GDTEIFIFPGYQYLLVDCLITNFHLPESTLIMLVSAFAGYGHTMAAYEHAVKEQYRFFSY 339
Query: 351 GDTSLL 356
GD +
Sbjct: 340 GDAMFI 345
>gi|88812647|ref|ZP_01127894.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Nitrococcus
mobilis Nb-231]
gi|88790063|gb|EAR21183.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Nitrococcus
mobilis Nb-231]
Length = 347
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 142/355 (40%), Positives = 195/355 (54%), Gaps = 22/355 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P+ R ++RL+V+ D L L D +V
Sbjct: 1 MRVSDFHFELPDELIASTPLPERTASRLLVIDAATGA---CQDRRFDALVELLRRGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L GV+ + L + +S V+ R +K + G L
Sbjct: 58 VNDTRVIPARLYGVK-----ESGGRVEVLLERLLDAHSALVHVRANKAPRPGTRLWL--- 109
Query: 121 DGQSRLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARK-RPIDARDYV 178
+ L A V+ + GE+ L F + LE + G +PLPPY+ R P+D Y
Sbjct: 110 --EEALPALVLGRQ--GELYRLRFETTEPLLE-LLERYGHVPLPPYLRRADTPVDRERY- 163
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
QT +A G+VAAPTAGLHF LL RL G+ VTLHVGAGTF P++ E + H
Sbjct: 164 --QTVFAARPGAVAAPTAGLHFDQALLQRLAQKGVAQARVTLHVGAGTFQPLRTERVEQH 221
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E +D+ + +++GGR+V+VGTT +R LETA G + P+ G T++FI
Sbjct: 222 QMHAEYLEVDSAVCARVAQTRAQGGRVVAVGTTVVRALETA-ARSGALQPYRGETDLFIY 280
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
PGYRFR VD L++NFHLP S+LLMLV AF G E Y+HA++ YRFYSYGD
Sbjct: 281 PGYRFRTVDALITNFHLPGSSLLMLVCAFAGREPVLSAYRHAVAARYRFYSYGDA 335
>gi|260866563|ref|YP_003232965.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O111:H- str. 11128]
gi|257762919|dbj|BAI34414.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O111:H- str. 11128]
gi|323178332|gb|EFZ63910.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 1180]
Length = 356
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 144/363 (39%), Positives = 207/363 (57%), Gaps = 27/363 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R S RL+ +L P H +DL LN D +
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLL----SLDGPTGALTHGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + R SK K G
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEVLVERMLDDKRILAHIRASKAPKPG--AELLL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARKRPIDAR 175
D +S + AT+ + +F + ER + + +G +PLPPYI RP +
Sbjct: 110 GDDES-INATMTARHGA-----LFEVE-FNDERSVLDILNSIGHMPLPPYI--DRPDEDA 160
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+
Sbjct: 161 DRELYQTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTI 220
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFT 293
+DHI+HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T
Sbjct: 221 EDHIIHSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDT 280
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFI PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD
Sbjct: 281 QIFIYPGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDA 340
Query: 354 SLL 356
+
Sbjct: 341 MFI 343
>gi|114566953|ref|YP_754107.1| S-adenosylmethionine tRNA ribosyltransferase [Syntrophomonas wolfei
subsp. wolfei str. Goettingen]
gi|122318043|sp|Q0AX18|QUEA_SYNWW RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|114337888|gb|ABI68736.1| S-adenosylmethionine tRNA ribosyltransferase [Syntrophomonas wolfei
subsp. wolfei str. Goettingen]
Length = 352
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 138/349 (39%), Positives = 191/349 (54%), Gaps = 14/349 (4%)
Query: 8 FDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVI 67
+DLPP IA P RDS+RL+V+ ++D D+ +L DA+V N T+VI
Sbjct: 17 YDLPPELIAQYPAEYRDSSRLLVLDRKSGD---LNDRAFKDISLYLKKGDALVLNETRVI 73
Query: 68 TAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLE 127
A RF + L ++ + W +P++ +K G + F S D +E
Sbjct: 74 PA-----RFFAYKESGARVEILLLKKLG-DDWEALVKPARRLKAGSRV-FLSPDKPLVIE 126
Query: 128 ATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKI 187
++++ + V ++ + + G IPLPPYI RP + D YQT YA
Sbjct: 127 --IVEELDFAGGRRVRFQDSVDEDTLLQEQGHIPLPPYI--NRPDEELDRERYQTVYACK 182
Query: 188 QGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFI 247
GSVAAPTAGLHFT +LL + GI + + LHVG GTF PVK ED H MH E +
Sbjct: 183 SGSVAAPTAGLHFTPDLLKEITLQGINIVRIVLHVGMGTFRPVKNEDIRQHNMHLEYYEV 242
Query: 248 DAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVD 307
A LN + GG+IV+VGTT +R LE+ +D G TN +I PGY+FRA+D
Sbjct: 243 AEDAAALLNLTRESGGQIVAVGTTVVRTLESVYNKDCGFLAGKGETNKYIFPGYQFRAID 302
Query: 308 ILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
L++NFHLP S+LLMLV+ F G E T Y+HA+ + YRF+SYGD L+
Sbjct: 303 KLLTNFHLPGSSLLMLVAGFAGTESTLAAYRHAVENRYRFFSYGDAMLV 351
>gi|197248441|ref|YP_002145387.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
gi|226713847|sp|B5EWT8|QUEA_SALA4 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|197212144|gb|ACH49541.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
Length = 354
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 145/359 (40%), Positives = 204/359 (56%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P R RL+ +L P H +DL LN D +
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLL----SLEGPTGALTHGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEVLVERMLDDKRILAHIRASKAPKPGTEL--LL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
D +S + AT+ + G + V + ++ +G +PLPPYI RP + D
Sbjct: 110 GDDES-IHATMTARH--GALFEVEFNDPRPVLDILNAIGHMPLPPYI--DRPDEDADREL 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y++ G+VAAPTAGLHF LL+ L G+++ FVTLHVGAGTF PV+V+ +DHI
Sbjct: 165 YQTVYSEKPGAVAAPTAGLHFDEPLLAALREKGVEMAFVTLHVGAGTFQPVRVDTIEDHI 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFI 297
MHSE + A+ + K+RG R+++VGTTS+R LE+A + +I P+ G T IFI
Sbjct: 225 MHSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKRDLIEPFFGDTQIFI 284
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 285 YPGYQYKVIDALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQKYRFFSYGDAMFI 343
>gi|152980695|ref|YP_001352040.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Janthinobacterium sp. Marseille]
gi|166216727|sp|A6SUU3|QUEA_JANMA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|151280772|gb|ABR89182.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Janthinobacterium sp. Marseille]
Length = 341
Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 145/355 (40%), Positives = 194/355 (54%), Gaps = 24/355 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LP IA P+ R ++RL+ V P ++D + + L+ D +VFN
Sbjct: 4 LSDFDFELPQELIAQTPLAERSASRLLQVLPEQ-----MTDRNFAYIVDLLSPGDLLVFN 58
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+V+ A RF I ++ + + + R SK G +
Sbjct: 59 DTRVLKA-----RFFGIKETGGKVEVLVERVIDQRNVHAQIRASKSPAVGMRIRLAD--- 110
Query: 123 QSRLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
VI GE L F EL I G +PLPPYI + DA D YQ
Sbjct: 111 ----AFDVIVGERAGEFYELQFPDDVFEL---IEAHGRLPLPPYI--EHAADAYDETRYQ 161
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YAK G+VAAPTAGLHF LL L + G+K+ ++TLHVGAGTF PV+ E+ +H MH
Sbjct: 162 TVYAKTPGAVAAPTAGLHFDQALLDALTAKGVKLAYITLHVGAGTFQPVRNENLAEHNMH 221
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
SE I T + + + GG IV+VGTTS+R LE+A ++ G + S T +FITPGY
Sbjct: 222 SEWYTISQQTVDLVKATQVAGGNIVAVGTTSMRALESA-SQSGSLQAGSADTRLFITPGY 280
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
F+ V L++NFHLPKSTLLMLVSAF G + + YQHAIS YRF+SYGD L
Sbjct: 281 TFKTVTRLITNFHLPKSTLLMLVSAFAGYDTIRAAYQHAISQRYRFFSYGDAMFL 335
>gi|82542893|ref|YP_406840.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
boydii Sb227]
gi|91207402|sp|Q325J6|QUEA_SHIBS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|81244304|gb|ABB65012.1| probably S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Shigella boydii Sb227]
gi|332098450|gb|EGJ03416.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
boydii 3594-74]
Length = 356
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 143/359 (39%), Positives = 207/359 (57%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R S RL+ +L P ++ +DL LN D +
Sbjct: 1 MRVTDFFFELPESLIAHYPMPERSSCRLL----SLDGPTGALTHGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + R SK K G
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEVLVERMLDDKRILAHIRASKAPKPG--AELLL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
D +S + AT+ + G + V + ++ +G +PLPPYI RP + D
Sbjct: 110 GDDES-INATMTARH--GALFEVEFNDDRSVLDILNSIGHMPLPPYI--DRPDEDADREL 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHI
Sbjct: 165 YQTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHI 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFI 297
MHSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 225 MHSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFI 284
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 285 YPGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFI 343
>gi|168818989|ref|ZP_02830989.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Weltevreden str.
HI_N05-537]
gi|205343962|gb|EDZ30726.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Weltevreden str.
HI_N05-537]
gi|320084679|emb|CBY94470.1| synthesis of queuine in tRNA [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
Length = 354
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 145/359 (40%), Positives = 204/359 (56%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P R RL+ +L P H +DL LN D +
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLL----SLEGPTGALTHGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEVLVERMLDDKRILAHIRASKAPKPGTEL--LL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
D +S + AT+ + G + V + ++ +G +PLPPYI RP + D
Sbjct: 110 GDDES-IHATMAARH--GALFEVEFNDPRPVLDILNAIGHMPLPPYI--DRPDEDADREL 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y++ G+VAAPTAGLHF LL+ L G+++ FVTLHVGAGTF PV+V+ +DHI
Sbjct: 165 YQTVYSEKPGAVAAPTAGLHFDEPLLAALREKGVEMAFVTLHVGAGTFQPVRVDTIEDHI 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFI 297
MHSE + A+ + K+RG R+++VGTTS+R LE+A + +I P+ G T IFI
Sbjct: 225 MHSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKSDLIEPFFGDTQIFI 284
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 285 YPGYQYKVIDALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQKYRFFSYGDAMFI 343
>gi|328947936|ref|YP_004365273.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Treponema
succinifaciens DSM 2489]
gi|328448260|gb|AEB13976.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Treponema
succinifaciens DSM 2489]
Length = 346
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 135/360 (37%), Positives = 201/360 (55%), Gaps = 19/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F+FDLP IA +P R + +LM + + + + + DL + +V
Sbjct: 1 MKTSDFNFDLPEELIAQKPSGIRGNDKLMFLDKSTGK---VFHYAMKDLVDLVEPGTLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV ++ G++ RE+E N W+ + +K +K G++ F
Sbjct: 58 FNNSKVRRSRCYGIK--TDTGREQEFMFLNQTSPEGNIWNTMVKGAKKVKPGNVYKF--P 113
Query: 121 DGQSRLEATVIDKWNTGE----ILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
DG V D N G I F ++ + E+ G IPLPPYI +R D D
Sbjct: 114 DGSEG--KIVSDSKNDGTEFRFIEFPFRLTEVWFEKN----GHIPLPPYI--RREDDDTD 165
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK GS A PTAGLHFT +L +L + + ++TLHVG GTF+PV+ ++ +
Sbjct: 166 SERYQTIYAKETGSAACPTAGLHFTEFVLEKLKEKNVDLEWITLHVGLGTFLPVRADNIE 225
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+H MH E + A+ +NS K G +++VGTTS+R LE+A+ E+GI++ + TNIF
Sbjct: 226 EHKMHEEFYTVPYDVAEKINSAKKEGRPVLAVGTTSVRTLESASDENGIVHGGTRSTNIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ PGY+F+ VD + +NFH P+STL+MLVSAF G E Y+ A+ + YRF+SYGD L+
Sbjct: 286 MYPGYKFKVVDQMFTNFHTPESTLIMLVSAFAGRENILNAYKIAVENRYRFFSYGDAMLI 345
>gi|221632729|ref|YP_002521950.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Thermomicrobium roseum DSM 5159]
gi|221156280|gb|ACM05407.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Thermomicrobium roseum DSM 5159]
Length = 353
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 138/362 (38%), Positives = 208/362 (57%), Gaps = 20/362 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + E+D++LP IA P+ PRD+ARLMVV I + +LP+ L+ D ++
Sbjct: 7 LSLHEYDYELPEELIAQEPIEPRDAARLMVVRRATHS---IEHRIFRELPSLLDPGDLLI 63
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS-WSVYARPSKVIKKGDILHFFS 119
N+++V+ A+L G R ++ L + + W ARP++ ++ G+ +
Sbjct: 64 VNDSRVLPARLLGHRLTG-----GKVEILLVQPLEGTTVWLALARPARKLRPGETITIQP 118
Query: 120 QDGQSRLEATV-IDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+D Q A + I + +G ++V GI ++ G +PLPPYI RP+ D
Sbjct: 119 RDPQFAQPAPLRIRERRSGGQVIVELDPGIA--ERLDAFGHVPLPPYI--HRPLS--DPE 172
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YA+ GSVAAPTAGLHFT LL L GI++ +TLHVG GTF P++V D H
Sbjct: 173 RYQTVYARHPGSVAAPTAGLHFTERLLDELRQRGIRIAPLTLHVGIGTFKPIEVTDVRLH 232
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET---ATTEDGIINPWSGFTNI 295
MH+E + A T + ++ RIV+VGTT+ R LE+ A T D P +G+T++
Sbjct: 233 KMHAEWYAVPAETVSLIRETRAANRRIVAVGTTAARTLESIADALTGD-TEGPITGWTDL 291
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
+I PGY +R VD L++NFHLP+STL++LV++F G E + Y+ A+ YRFYS+GD L
Sbjct: 292 YIYPGYHWRVVDALITNFHLPRSTLILLVASFAGRELILEAYREAVQQRYRFYSFGDAML 351
Query: 356 LF 357
+
Sbjct: 352 IL 353
>gi|16759382|ref|NP_454999.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhi str. CT18]
gi|29142847|ref|NP_806189.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhi str. Ty2]
gi|213163212|ref|ZP_03348922.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
gi|213650157|ref|ZP_03380210.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhi str. J185]
gi|213854740|ref|ZP_03382980.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhi str. M223]
gi|289825047|ref|ZP_06544399.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhi str. E98-3139]
gi|21263879|sp|Q8Z8Y1|QUEA_SALTI RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|25318245|pir||AD0552 S-adenosylmethionine,tRNA ribosyltransferase-isomerase [imported] -
Salmonella enterica subsp. enterica serovar Typhi
(strain CT18)
gi|16501673|emb|CAD08860.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhi]
gi|29138479|gb|AAO70049.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhi str. Ty2]
Length = 354
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 145/359 (40%), Positives = 204/359 (56%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P R RL+ +L P H +DL LN D +
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLL----SLEGPTGALTHGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEVLVERMLDDKRILAHIRASKAPKPGTEL--LL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
D +S + AT+ + G + V + ++ +G +PLPPYI RP + D
Sbjct: 110 GDDES-IHATMTARH--GALFEVEFNDPRPVLDILNAIGHMPLPPYI--DRPDEDADREL 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y++ G+VAAPTAGLHF LL+ L G+++ FVTLHVGAGTF PV+V+ +DHI
Sbjct: 165 YQTVYSEKPGAVAAPTAGLHFDEPLLAALREKGVEMAFVTLHVGAGTFQPVRVDTIEDHI 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFI 297
MHSE + A+ + K+RG R+++VGTTS+R LE+A + +I P+ G T IFI
Sbjct: 225 MHSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKSDLIEPFFGDTQIFI 284
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 285 YPGYQYKVIDALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQKYRFFSYGDAMFI 343
>gi|53726169|ref|YP_103943.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia mallei ATCC 23344]
gi|67642347|ref|ZP_00441105.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia mallei GB8 horse 4]
gi|254202658|ref|ZP_04909021.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia mallei FMH]
gi|254207999|ref|ZP_04914349.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia mallei JHU]
gi|81604315|sp|Q62H77|QUEA_BURMA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|52429592|gb|AAU50185.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia mallei ATCC 23344]
gi|147746905|gb|EDK53982.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia mallei FMH]
gi|147751893|gb|EDK58960.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia mallei JHU]
gi|238523486|gb|EEP86924.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia mallei GB8 horse 4]
Length = 360
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 149/364 (40%), Positives = 206/364 (56%), Gaps = 21/364 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
+ + +FDFDLPP IA + R ++RL+ V + N S P + D ++LPA + D +
Sbjct: 2 LTLSDFDFDLPPELIAQTALPERSASRLLEVDNTNPSAPPRLIDRRFAELPACVAPGDLL 61
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFN+TKV+ A+ G R + E I R++ R SK G L
Sbjct: 62 VFNDTKVLKARFFG-RKASGGKIEVLIERVTGERIA----LAQIRASKSPPPGTTLTL-- 114
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ TV ++ L + +ER G +PLPPYI + DA D
Sbjct: 115 ---ADAFDVTVGERVEPFFTLHFPDNCLVLIERH----GRLPLPPYI--EHAPDAADETR 165
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H
Sbjct: 166 YQTVFAANPGAVAAPTAGLHFDDAVLAALEARGVERATLTLHVGAGTFQPVRVENLAEHR 225
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN-PWSGF---TNI 295
MHSE + + + + ++RGGR+++VGTTS+R LE A + P + T+I
Sbjct: 226 MHSESYELTDALVEKIAATRARGGRVIAVGTTSMRALEAAARDAQAAGRPLAATRAETDI 285
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFR VD L++NFHLPKSTLLMLVSAF GIE + Y+HAI YRF+SYGD L
Sbjct: 286 FITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGIETIRAAYRHAIDARYRFFSYGDAML 345
Query: 356 LFQK 359
L ++
Sbjct: 346 LTRR 349
>gi|332042759|gb|EGI78959.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Lacinutrix
algicola 5H-3-7-4]
Length = 354
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 141/363 (38%), Positives = 195/363 (53%), Gaps = 22/363 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F+FDLP +A P RD +RLMV++ I DL + + D ++
Sbjct: 6 MKLSHFNFDLPEELLAEYPSENRDESRLMVLNRKEQT---IEHKQFKDLIDYFDEEDVMI 62
Query: 61 FNNTKVITAQLNGVRFCHINRREK-----EISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
NNTKV A+L G +EK E+ + W V P++ I+ G+ L
Sbjct: 63 LNNTKVFPARLFG-------NKEKTGARIEVFLLRELNEEQRLWDVLVDPARKIRIGNKL 115
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPID 173
+F D +S L A VID + L F G E ++ +G PLP YI KR ++
Sbjct: 116 YF--GDDES-LVAEVIDNTTSRGRTLRFLYDGSYKEFRNKLKELGETPLPKYI--KRDVE 170
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT +AK +G+VAAPTAG+HF+ +LL RL GI VTLHVG GTF PV+VE
Sbjct: 171 PEDEDRYQTIFAKNEGAVAAPTAGMHFSKHLLKRLEIKGIDFAEVTLHVGLGTFNPVEVE 230
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
D H M SE I T + +N RI +VGTT++R +E+A + +N G+T
Sbjct: 231 DLSKHKMDSEEVTIGPKTVERINRALKDKKRICAVGTTAMRAVESAVSSSNTLNEIDGWT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
N FI P Y F + +++NFH PKSTLLM+ SAF G + K+ Y+ A+ Y+FYSYGD
Sbjct: 291 NKFIFPPYDFSIANCMITNFHTPKSTLLMMASAFAGHDFIKRAYEEAVKEKYKFYSYGDA 350
Query: 354 SLL 356
L+
Sbjct: 351 MLI 353
>gi|259909289|ref|YP_002649645.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Erwinia
pyrifoliae Ep1/96]
gi|224964911|emb|CAX56434.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein QueA) [Erwinia pyrifoliae Ep1/96]
gi|283479344|emb|CAY75260.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Erwinia
pyrifoliae DSM 12163]
Length = 358
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 146/368 (39%), Positives = 204/368 (55%), Gaps = 37/368 (10%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLV-SDLPAFLNSNDAI 59
M V +F F LP S IA P R RL+ +L+ P H V +DL LN D +
Sbjct: 3 MRVADFTFKLPESLIAHYPQTQRSGCRLL----SLNGPDGALTHGVFTDLLHKLNPGDLL 58
Query: 60 VFNNTKVITAQLNGVRFCH------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGD 113
VFNNT+VI A++ G + + R E H+R S RP + GD
Sbjct: 59 VFNNTRVIPARIFGRKVSGGKIEVLVERMLDEKRVLAHVRSSKAP-----RPGSELLLGD 113
Query: 114 ILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISL---VGTIPLPPYIARKR 170
++AT++ + + +F I + + + +G +PLPPYI R
Sbjct: 114 ---------DENVQATMLARHDA-----LFEIEFNDARPVLDILNSIGHMPLPPYI--DR 157
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
P + D YQT Y++ G+VAAPTAGLHF LL L GI+ FVTLHVGAGTF PV
Sbjct: 158 PDEDADRELYQTVYSQKPGAVAAPTAGLHFDEPLLEALREKGIETAFVTLHVGAGTFQPV 217
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDG--IINP 288
+V+ ++HIMH+E + A+ + K+RG R+++VGTTS+R LE+A G +I P
Sbjct: 218 RVDTIEEHIMHAEYAEVPQDVVDAVLACKARGNRVIAVGTTSVRSLESAAQVAGNDLIAP 277
Query: 289 WSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
+ G T IFI PGY ++ +D L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+
Sbjct: 278 FFGDTKIFIYPGYHYQVIDALVTNFHLPESTLIMLVSAFAGYQNTMHAYQQAVAEQYRFF 337
Query: 349 SYGDTSLL 356
SYGD +
Sbjct: 338 SYGDAMFI 345
>gi|299138179|ref|ZP_07031359.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Acidobacterium sp. MP5ACTX8]
gi|298600109|gb|EFI56267.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Acidobacterium sp. MP5ACTX8]
Length = 373
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 147/377 (38%), Positives = 207/377 (54%), Gaps = 26/377 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +F +DLP IA RP R ++R+M + SDH ++LP L D +V
Sbjct: 1 MLVSDFHYDLPEELIAQRPPAVRGTSRMMTLDRRTGD---FSDHTFAELPLLLQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV----------SPNSWSVYARPSKVIK 110
N+++VI A+L R + + + + H+ V N WS RP+K I+
Sbjct: 58 MNDSRVIPARLFATR-AGLTTQHNSPAPSGHIEVLLTQRHASAEGYNDWSALVRPAKKIQ 116
Query: 111 KGDILHFFSQDGQSRL-EATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARK 169
G+ L F D + L ATV+ GE L F + + + +G +PLPPYI R
Sbjct: 117 PGETLLFAPDDSTAPLLRATVLSAGEFGERTLRFDPAE-DFHAALERIGHLPLPPYIHRS 175
Query: 170 R--PIDARDYVDYQTTYAK------IQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLH 221
+ P + D YQT Y++ +GS AAPTAGLHFT +LS+L G++ +TLH
Sbjct: 176 KQEPNTSEDRERYQTVYSQQLTSAEAEGSAAAPTAGLHFTPEVLSQLKERGVEFATLTLH 235
Query: 222 VGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE--TA 279
VG GTF PV+VE T+D +H+E + TA+A+ + G RIV+VGTT+ R LE
Sbjct: 236 VGLGTFQPVRVERTEDIRLHAEHYTLSTTTAEAIQRARREGRRIVAVGTTTTRTLEHIAR 295
Query: 280 TTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQH 339
T I SG T +F++PG F+ V L++NFHLP+STLLMLVSAF G E+ Y H
Sbjct: 296 ETNGSEIAAHSGSTALFLSPGVEFKLVGGLLTNFHLPQSTLLMLVSAFAGREQALAAYAH 355
Query: 340 AISHAYRFYSYGDTSLL 356
A+ YRF+SYGD L+
Sbjct: 356 AVEARYRFFSYGDCMLI 372
>gi|237737787|ref|ZP_04568268.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium mortiferum ATCC 9817]
gi|229419667|gb|EEO34714.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium mortiferum ATCC 9817]
Length = 343
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 146/358 (40%), Positives = 200/358 (55%), Gaps = 26/358 (7%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
++D+ LP I P PRD ARLM+V + + + H D+ +L D +V N+T
Sbjct: 7 DYDYHLPEELIGQEPREPRDHARLMLV--DKTNKKIEHKHFY-DIIDYLQEGDILVRNST 63
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHM----RVSPNSWSVYARPSKVIKKGDILHFFSQ 120
KVI A+L F H KE L + R++ ++W +P+K +K G L+
Sbjct: 64 KVIPARL----FGH-----KETGGVLEILLIKRINLDTWECLLKPAKKLKLGQKLYM--- 111
Query: 121 DGQ-SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
GQ S L A +I+ + G +L F+ G E + +G +PLPPYI R
Sbjct: 112 -GQNSELVAELIEIKDDGNRVLKFTYEGA-FEEVLDKLGNMPLPPYIVETLKEKER---- 165
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ SVAAPTAGLHFT LL ++ GIK+ + L VG GTF PV+ ED DH
Sbjct: 166 YQTVYAQRGESVAAPTAGLHFTKELLEKIEKKGIKIVDIFLEVGLGTFRPVQTEDVLDHK 225
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH EI I A +N K+ G RI+SVGTTS R LE++ E+G + T+IFI P
Sbjct: 226 MHEEIFEIPQEAADIINKGKAEGRRIISVGTTSTRALESSVDENGKVIAQKASTDIFIYP 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY F+ +D L++NFHLPKSTLLMLVSAF E +Y+ A+ Y F+S+GD ++
Sbjct: 286 GYEFKVIDALITNFHLPKSTLLMLVSAFSSREFMLSVYETAVKEKYHFFSFGDAMFIY 343
>gi|224582241|ref|YP_002636039.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Paratyphi C strain
RKS4594]
gi|254764286|sp|C0Q7S8|QUEA_SALPC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|224466768|gb|ACN44598.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Paratyphi C strain
RKS4594]
Length = 354
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 145/359 (40%), Positives = 204/359 (56%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P R RL+ +L P H +DL LN D +
Sbjct: 1 MRVTDFSFELPDSLIAHYPQPERSRCRLL----SLEGPTGALTHGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEVLVERMLDDKRILAHIRASKAPKPGTEL--LL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
D +S + AT+ + G + V + ++ +G +PLPPYI RP + D
Sbjct: 110 GDDES-IHATMTARH--GALFEVEFNDPRPVLDILNAIGHMPLPPYI--DRPDEDADREL 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y++ G+VAAPTAGLHF LL+ L G+++ FVTLHVGAGTF PV+V+ +DHI
Sbjct: 165 YQTVYSEKPGAVAAPTAGLHFDEPLLAALREKGVEMAFVTLHVGAGTFQPVRVDTIEDHI 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFI 297
MHSE + A+ + K+RG R+++VGTTS+R LE+A + +I P+ G T IFI
Sbjct: 225 MHSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKSDLIEPFFGDTQIFI 284
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 285 YPGYQYKVIDALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQKYRFFSYGDAMFI 343
>gi|204926792|ref|ZP_03217994.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Javiana str.
GA_MM04042433]
gi|204323457|gb|EDZ08652.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Javiana str.
GA_MM04042433]
Length = 354
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 145/359 (40%), Positives = 204/359 (56%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P R RL+ +L P H +DL LN D +
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLL----SLEGPTGALTHGTFTDLLDKLNLGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEVLVERMLDDKRILAHIRASKAPKPGTEL--LL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
D +S + AT+ + G + V + ++ +G +PLPPYI RP + D
Sbjct: 110 GDDES-IHATMTARH--GALFEVEFNDPRPVLDILNAIGHMPLPPYI--DRPDEDADREL 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y++ G+VAAPTAGLHF LL+ L G+++ FVTLHVGAGTF PV+V+ +DHI
Sbjct: 165 YQTVYSEKPGAVAAPTAGLHFDEPLLAALREKGVEMAFVTLHVGAGTFQPVRVDTIEDHI 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFI 297
MHSE + A+ + K+RG R+++VGTTS+R LE+A + +I P+ G T IFI
Sbjct: 225 MHSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKSDLIEPFFGDTQIFI 284
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 285 YPGYQYKVIDALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQKYRFFSYGDAMFI 343
>gi|271499567|ref|YP_003332592.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Dickeya
dadantii Ech586]
gi|270343122|gb|ACZ75887.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Dickeya
dadantii Ech586]
Length = 355
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 142/362 (39%), Positives = 206/362 (56%), Gaps = 25/362 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLV-SDLPAFLNSNDAI 59
M V +F F+LP S IA P R RL+ +L P H V +DL L D +
Sbjct: 1 MRVADFSFELPESLIARYPQAQRSGCRLL----SLDGPTGAVAHGVFTDLLDKLQPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + ++ + + + R SK K G +L
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKLEVLVERMLDDKRVLAHVRASKAPKPGTVL-LLG 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISL---VGTIPLPPYIARKRPIDARD 176
+D ++AT++ + + +F I + +++ +G +PLPPYI RP +A D
Sbjct: 111 ED--ESVKATMLARHDA-----LFEIQFDDTRDVLTILNDIGHMPLPPYI--DRPDEAAD 161
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT Y++ G+VAAPTAGLHF LL+ L G+++ FVTLHVGAGTF PV+VE +
Sbjct: 162 RELYQTVYSQRPGAVAAPTAGLHFDEPLLAALKEKGVEMAFVTLHVGAGTFQPVRVESIE 221
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLL--ETATTEDGIINPWSGFTN 294
DH+MH+E + A+ + K+RG R+++VGTTS+R L + + +I P+ G T
Sbjct: 222 DHVMHAEYAEVPQTVVDAVLACKARGNRVIAVGTTSVRSLESAAQASAEAVIAPFFGDTR 281
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PGY ++ VD L++NFHLP+STL+MLVSAF G T Y+ A++ YRF+SYGD
Sbjct: 282 IFIYPGYHYQVVDALVTNFHLPESTLIMLVSAFVGYRHTMDAYRQAVAEQYRFFSYGDAM 341
Query: 355 LL 356
+
Sbjct: 342 FI 343
>gi|307249979|ref|ZP_07531951.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 4 str. M62]
gi|306858039|gb|EFM90123.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 4 str. M62]
Length = 361
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 145/371 (39%), Positives = 201/371 (54%), Gaps = 36/371 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +F FDLP IA P R ++RL+ ++ D DL +N D ++
Sbjct: 1 MLVSDFHFDLPDELIARYPTEERTASRLLHLNGETGH---FEDKQFFDLLDQINEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCH------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
FNNT+VI A+L G + + R E C H+R S K K+G
Sbjct: 58 FNNTRVIPARLYGRKASGGKLEVLVERVLDEHRCLAHVRAS-----------KAPKEGAE 106
Query: 115 LHFFSQDGQSRL-EATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARK 169
L G+ +L E T +F + E ER + G +PLPPYI
Sbjct: 107 LVL----GEDKLGEGNGFKAIMTARHDALFELHFNE-ERPVFDLLQQAGHMPLPPYI--D 159
Query: 170 RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
RP + D YQT Y+K+ G+VAAPTAGLHF + L +L + G+ + FVTLHVGAGTF P
Sbjct: 160 RPDEDADQERYQTVYSKVLGAVAAPTAGLHFDNPTLEKLKAKGVNIAFVTLHVGAGTFQP 219
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGI 285
V+V++ DH MH+E + + + K+ G R+++VGTTS+R +E+A E +
Sbjct: 220 VRVDNILDHKMHAEYAEVSQAVVDQILATKATGKRVIAVGTTSVRSIESAAQAAEKEGKL 279
Query: 286 INPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAY 345
I P+ T+IF+ PG FR VD L++NFHLP+STL+MLVSAF G T K YQHA+ Y
Sbjct: 280 IAPFFSDTSIFLYPGKTFRIVDALVTNFHLPESTLIMLVSAFAGYRNTMKAYQHAVEAKY 339
Query: 346 RFYSYGDTSLL 356
RF+SYGD +
Sbjct: 340 RFFSYGDAMFI 350
>gi|301063410|ref|ZP_07203946.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [delta
proteobacterium NaphS2]
gi|300442483|gb|EFK06712.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [delta
proteobacterium NaphS2]
Length = 352
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 140/367 (38%), Positives = 208/367 (56%), Gaps = 30/367 (8%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++++++ LP + IA PV RD +RL++V P S ++D DLP+FL D +V
Sbjct: 4 IEDYNYHLPEALIAQFPVDKRDHSRLLLVDRPTGS----LADRRFFDLPSFLGPGDLLVV 59
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRV--SPN-------SWSVYARPSKVIKKG 112
NNT+V+ A++ G +KE + + V PN S + S+ K G
Sbjct: 60 NNTRVVPARVFG---------QKESGGKVEVLVLEHPNGADCREESRLCLLKSSRRPKPG 110
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKR-- 170
+ F + + + + ++ G + F + ++ G +PLPPYI R +
Sbjct: 111 SRIFF-----EGSVTGEIEEIFDRGLTRISFKADEKSMAEFLAENGILPLPPYIKRSKDA 165
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
+D D YQT YA+ G+VAAPTAGLHFT +L++ L + G+K +TLHVG GTF PV
Sbjct: 166 SLDMLDKERYQTVYAERAGAVAAPTAGLHFTEDLITALRAKGVKTAPLTLHVGYGTFKPV 225
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWS 290
+ ED +H + E I+ TA+ +N ++ GGR+ +VGTT +R LETA TE+ + +
Sbjct: 226 ETEDIREHRLGEEQFVIEPHTAKLINETRADGGRVFAVGTTVVRTLETAWTEEKGVCAGA 285
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G T + ITPG++F VD L++NFHLP+S+LL LVSAF G TKK Y A+ YRFYSY
Sbjct: 286 GKTGLMITPGFQFHVVDGLITNFHLPRSSLLFLVSAFAGFALTKKAYAWAVGQQYRFYSY 345
Query: 351 GDTSLLF 357
GD L+
Sbjct: 346 GDAMLIL 352
>gi|168261167|ref|ZP_02683140.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Hadar str. RI_05P066]
gi|200390136|ref|ZP_03216747.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Virchow str. SL491]
gi|199602581|gb|EDZ01127.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Virchow str. SL491]
gi|205350104|gb|EDZ36735.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Hadar str. RI_05P066]
Length = 354
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 146/359 (40%), Positives = 203/359 (56%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P R RL+ +L P H +DL LN D +
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLL----SLEGPTGALTHGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEVLVERMLDDKRILAHIRASKAPKPGTEL--LL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
D +S + AT+ + G + V + ++ +G +PLPPYI RP + D
Sbjct: 110 GDDES-IHATMTARH--GALFEVEFNDPRPVLDILNAIGHMPLPPYI--DRPDEDADREL 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y++ G+VAAPTAGLHF LL+ L GI++ FVTLHVGAGTF PV+V+ +DHI
Sbjct: 165 YQTVYSEKPGAVAAPTAGLHFDEPLLAALREKGIEMAFVTLHVGAGTFQPVRVDTIEDHI 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFI 297
MHSE + A+ + K RG R+++VGTTS+R LE+A + +I P+ G T IFI
Sbjct: 225 MHSEYAEVPQEVVDAVLAAKVRGNRVIAVGTTSVRSLESAAQAAKSDLIEPFFGDTQIFI 284
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 285 YPGYQYKVIDALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQKYRFFSYGDAMFI 343
>gi|262042426|ref|ZP_06015586.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Klebsiella
pneumoniae subsp. rhinoscleromatis ATCC 13884]
gi|259040201|gb|EEW41312.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Klebsiella
pneumoniae subsp. rhinoscleromatis ATCC 13884]
Length = 354
Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 142/359 (39%), Positives = 208/359 (57%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R S RL+ +L P ++ +D+ LN D +
Sbjct: 1 MRVTDFAFELPESLIAHYPMPERSSCRLL----SLDGPTGALTHGTFTDILDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEVLVERMLDDKRILAHIRASKAPKPGAEL--LL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
D +S ++AT++ + G + V + ++ +G +PLPPYI RP + D
Sbjct: 110 GDDES-IKATMLARH--GALFEVEFNDERPVLEILNGIGHMPLPPYI--DRPDEDADREL 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ ++H
Sbjct: 165 YQTVYGTRPGAVAAPTAGLHFDEPLLDKLRAKGVEMAFVTLHVGAGTFQPVRVDSIEEHT 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFI 297
MHSE + A+ + K+RG R+++VGTTS+R LE+A +D +I P+ T IFI
Sbjct: 225 MHSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKDALIAPFFDDTQIFI 284
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+++ +D+L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 285 YPGYQYQVIDVLVTNFHLPESTLIMLVSAFAGYQHTMNAYKVAVEQKYRFFSYGDAMFI 343
>gi|90407016|ref|ZP_01215206.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Psychromonas sp. CNPT3]
gi|90311887|gb|EAS39982.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Psychromonas sp. CNPT3]
Length = 348
Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 140/364 (38%), Positives = 206/364 (56%), Gaps = 22/364 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F LP IA P R ++RL+ + N + H + DL + +D ++
Sbjct: 1 MKVADFSFQLPEQLIARYPTPERSASRLLSLEGNSGQLQHLHFHNILDL---IKKDDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G++ +I + + + + R SK K G L
Sbjct: 58 FNDTRVIPARLFGIK----AETGGKIEVLVERVLDEKRFLAHVRSSKSPKPGCKLLL--- 110
Query: 121 DGQSRLEATVIDKWN-TGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
++ ++A ++ + EI + S +E+ + +G +PLPPYI RP + D
Sbjct: 111 --ENSIDAVMVKREGPLFEIQIDHPTSVLEV---LESIGHMPLPPYI--DRPDEDADKER 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y K G+VAAPTAGLHF +L +L + GI FVTLHVGAGTF PVKV++ DH
Sbjct: 164 YQTVYNKNPGAVAAPTAGLHFDQAILDKLQAKGIDFAFVTLHVGAGTFQPVKVDNILDHK 223
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE---DGI-INPWSGFTNI 295
MHSE+ + + + K+RGGRI++VGTTS+R +E+A G+ + P+ T+I
Sbjct: 224 MHSELAQVSQQVIDKIIAAKARGGRIIAVGTTSVRSIESAAKASIGQGLALAPYCAETDI 283
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGY+F+ +D +++NFHL +STLLMLVSAF G + YQ AI YRF+SYGD
Sbjct: 284 FIYPGYKFQLIDAMLTNFHLSESTLLMLVSAFAGKDNIDNAYQQAIKEEYRFFSYGDAMF 343
Query: 356 LFQK 359
+ +K
Sbjct: 344 ITKK 347
>gi|226356464|ref|YP_002786204.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Deinococcus
deserti VCD115]
gi|226318454|gb|ACO46450.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
(Queuosine biosynthesis protein queA) [Deinococcus
deserti VCD115]
Length = 353
Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 148/368 (40%), Positives = 204/368 (55%), Gaps = 41/368 (11%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
+FDLP +RIA PRDS+RLMVV L+ + +LP L D +VFN ++
Sbjct: 13 LNFDLPDNRIAQTGAEPRDSSRLMVVGETLAH------RVFHELPELLQPGDLLVFNESR 66
Query: 66 VITAQL-------NGVRFCHIN---RREKEISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
VI A++ NG+ + RE+E + + P+ WS Y +P++ + G+ L
Sbjct: 67 VIPARVMARKPLVNGLGGGQVEVLLLREEET-----LDLGPHVWSAYLKPAR--RAGNEL 119
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
G+ R E V+ + G LL F G +++ + +G +PLPPYI +
Sbjct: 120 WL----GEHRAE--VVGQLEDGARLLRF---GYDIKPHLDEIGRLPLPPYI----DAGSS 166
Query: 176 DYV---DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D V YQT YA+ GSVAAPTAGLHFT LLSRL + G++ VTLHVGAGTF P+
Sbjct: 167 DEVWRERYQTVYAREPGSVAAPTAGLHFTPELLSRLDARGVERVSVTLHVGAGTFKPI-T 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
DH+MH+E + A A+N + G R+V+VGTT++R LE+A + + G
Sbjct: 226 GSVADHVMHAERYMVSDQAADAINRARREGRRVVAVGTTTVRTLESAW-DGNAVRAGEGE 284
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T IFITPG D+L++N HLP STLL+LV+AF G E + Y A+S YRFYS GD
Sbjct: 285 TRIFITPGRPVNVPDLLITNLHLPGSTLLLLVAAFAGEERIRAAYDAALSEGYRFYSLGD 344
Query: 353 TSLLFQKR 360
LL R
Sbjct: 345 AMLLENLR 352
>gi|206889691|ref|YP_002248710.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Thermodesulfovibrio yellowstonii DSM 11347]
gi|226713854|sp|B5YKE5|QUEA_THEYD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|206741629|gb|ACI20686.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Thermodesulfovibrio yellowstonii DSM 11347]
Length = 345
Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 143/368 (38%), Positives = 211/368 (57%), Gaps = 36/368 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + E ++ LP IA +P+ RD +RL+V+H N I + ++ +LN D ++
Sbjct: 1 MKITELNYTLPTDLIAQKPLSERDKSRLLVLHKNTG---EIEHRIFYEIVEYLNEGDILI 57
Query: 61 FNNTKVITAQL-----NGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
NNTKVI A+L +G + + +EK+ C+ V W +V+ KG
Sbjct: 58 INNTKVIPARLIAEKPSGGKIEILLIKEKK--CSSQNVV----W-------EVMTKG--- 101
Query: 116 HFFSQDGQSRLEATVIDKWNT--GEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
S +G+ ++ + + N G ++ +++ ++ I+ G +PLPPYI RK PI
Sbjct: 102 ---SYEGEVFIDEFIAELRNNCDGRYIVFKNMTSPKVRNLINEKGFMPLPPYIKRK-PIQ 157
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
+ D DYQT YAK+ GS+AAPTAGLHFT LL +IS G+K+ +TLHVG GTF P+KV+
Sbjct: 158 S-DRQDYQTVYAKMNGSIAAPTAGLHFTKELLETIISKGVKLREITLHVGVGTFKPIKVD 216
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE---TATTEDGIINPW- 289
+H M E ID + + ++K G RI SVGTT+ R LE + ED + +
Sbjct: 217 KLQEHKMDPEYFEIDKTLIEEIYAIKKAGKRIFSVGTTTTRALEGYASGKYEDRGSDNYK 276
Query: 290 -SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
G T+IFI P + F+ VD L++NFHLPKST L +V AFC +++ KK Y+ AI YRF+
Sbjct: 277 IKGSTDIFIYPEFSFKIVDALITNFHLPKSTPLAMVYAFCEMQKVKKAYREAIEKGYRFF 336
Query: 349 SYGDTSLL 356
SYGD L+
Sbjct: 337 SYGDAMLI 344
>gi|54294901|ref|YP_127316.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Legionella
pneumophila str. Lens]
gi|81601277|sp|Q5WV37|QUEA_LEGPL RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|53754733|emb|CAH16220.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Legionella
pneumophila str. Lens]
Length = 337
Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 139/357 (38%), Positives = 203/357 (56%), Gaps = 20/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F FDLP IA P+ R +RL++ + + ++ FL D +V
Sbjct: 1 MNKQDFYFDLPSELIAQYPLANRSDSRLLIYNRQTE---EYGHYQFREIADFLQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N++KVI A+L G + ++ + ++ + + SK +K D+++
Sbjct: 58 MNDSKVIPARLYGHK-----ATGGKVELLVERITGDFTFLAHIKASKSLKSNDLIYL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D RLE V+ + + L + + ++ +G IPLPPYI R+ ++ D Y
Sbjct: 110 DAGKRLE--VLQRQDD----LFLCKASENILDLLNDLGHIPLPPYIDRED--ESLDKERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GSVAAPTAGLHF +LS + + G+ + ++TLHVGAGTF PV+ E DH M
Sbjct: 162 QTVYAKCAGSVAAPTAGLHFDEAVLSSIRARGVNIAYITLHVGAGTFRPVRCERIQDHKM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + KS G R+++VGTT+LR LE+A +I P S T+IFI PG
Sbjct: 222 HSEWFTVSPDLCTAVKAAKSMGNRVIAVGTTALRSLESAAMGGELI-PCSRDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ D L++NFHLP+STL+MLVSAF G +E +YQ AI YRF+SYGD SLL
Sbjct: 281 YQFKVCDGLITNFHLPESTLVMLVSAFIGHQECMALYQEAIDKRYRFFSYGDASLLL 337
>gi|255532466|ref|YP_003092838.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Pedobacter
heparinus DSM 2366]
gi|255345450|gb|ACU04776.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Pedobacter
heparinus DSM 2366]
Length = 349
Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 139/363 (38%), Positives = 196/363 (53%), Gaps = 22/363 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP S +A P RD ARLMV+H + I + D+ + + D ++
Sbjct: 1 MKLSQFKFNLPESLVANNPSEQRDEARLMVLHKDSGK---IEHKIFKDVLDYFDDQDVMI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREK-----EISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
NNTKV A+L G +EK E+ + W V P++ I+ G+ L
Sbjct: 58 LNNTKVFPARLYG-------NKEKTGATIEVFLLRELNKELRLWDVLVDPARKIRVGNKL 110
Query: 116 HFFSQDGQSRLEATVIDKWNTG--EILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
+F D L A V+D + I +F + E + I ++G PLP YI RK
Sbjct: 111 YFGDDD---LLVAEVVDNTTSRGRTIRFLFDGTDEEFRKNIEILGETPLPKYIKRKAT-- 165
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
A+D YQT +AK +G+VAAPTAGLHF+ L+ RL GI VTLHVG GTF V+VE
Sbjct: 166 AQDKERYQTIFAKHEGAVAAPTAGLHFSRELMKRLELKGINFAEVTLHVGLGTFRSVEVE 225
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
D H M SE I+ A +N R RI +VGTTS+R +E+A + + + +T
Sbjct: 226 DLTKHKMDSEQFIIEQKDADIVNKAIERKKRICAVGTTSMRAIESAVSSGRTLKAANDWT 285
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+ FI P Y F + +++NFH P+STLLM+VSAF G + + Y+ A+ YRFYSYGD
Sbjct: 286 SKFIFPPYDFSIANSMITNFHTPESTLLMMVSAFGGYDYVRHAYEVALKEKYRFYSYGDA 345
Query: 354 SLL 356
L+
Sbjct: 346 MLI 348
>gi|126174995|ref|YP_001051144.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
baltica OS155]
gi|166216751|sp|A3D6B2|QUEA_SHEB5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|125998200|gb|ABN62275.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Shewanella
baltica OS155]
Length = 345
Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 140/360 (38%), Positives = 197/360 (54%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R+++RL+ + N + D +DL +N D +V
Sbjct: 1 MRVADFSFDLPDELIARYPMAQRNASRLLTLDGNSGA---LGDKQFTDLLGMINPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + + R SK K + F
Sbjct: 58 FNNTRVIPARMFGQKAS-----GGKLEILVERMLDDKRILAHVRSSKSPK---VDSFILL 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DG +++ LL LE VG +PLPPYI RP + D Y
Sbjct: 110 DGGYQMKMVARHDTLFELELLSELTILEVLE----AVGHMPLPPYI--DRPDEDADKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF +L L + + + FVTLHVGAGTF PV+V+ +H M
Sbjct: 164 QTVYNQNPGAVAAPTAGLHFDDAMLDALKAKDVNIAFVTLHVGAGTFQPVRVDTILEHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFITP 299
HSE + + K+ G R+V+VGTTS+R LE+A G + +SG T+IFI P
Sbjct: 224 HSEWANVPQDVVDLIAQTKAAGKRVVAVGTTSVRSLESAARASQGELKAFSGDTDIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY+F+ VD +++NFHLP+STL+MLVSAF G + YQHAI+ YRF+SYGD + +K
Sbjct: 284 GYQFQVVDAMVTNFHLPESTLIMLVSAFAGFDHVMAAYQHAIAQKYRFFSYGDAMFVTKK 343
>gi|313677065|ref|YP_004055061.1| s-adenosylmethionine--tRNA ribosyltransferase-isomerase [Marivirga
tractuosa DSM 4126]
gi|312943763|gb|ADR22953.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Marivirga
tractuosa DSM 4126]
Length = 348
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 135/362 (37%), Positives = 200/362 (55%), Gaps = 21/362 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EF F+LP +A P RD A+LMV+H + I D+ + + D +V
Sbjct: 1 MKLSEFKFELPLKLVAQHPAEDRDLAKLMVLHKDTG---EIEHKTFKDIVDYFDEGDILV 57
Query: 61 FNNTKVITAQLNGVRFCHINRRE----KEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
NNTKV A+L G + + E +E++ +H+ W V P++ I+ G+ L+
Sbjct: 58 TNNTKVFPARLYGNKEKTGAQIEVFLLRELNKEMHL------WDVLVDPARKIRVGNKLY 111
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELE--RQISLVGTIPLPPYIARKRPIDA 174
F G L A VID + + F G + + + + +G PLP YI KRP++
Sbjct: 112 F----GDGELVAEVIDNTTSRGRTIKFLYDGDDQDFYKLVDSLGETPLPKYI--KRPVEE 165
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D +QT YA+ G+VAAPTAG+HFT +L R+ GIK +TLH+G GTF PV VED
Sbjct: 166 ADRERFQTIYAEEVGAVAAPTAGMHFTRQVLKRMELKGIKTSPITLHIGLGTFRPVDVED 225
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
H M SE + TA+ +N + R+ +VGTT++R +E++ T + + G+T+
Sbjct: 226 LTKHKMDSENFKVPVKTAELVNESLNSKKRVCAVGTTAMRSMESSVTANNRLKENEGWTD 285
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
FI P Y F+ + L++NFH+P+STLLM+ +AF G + YQ AI H YRF SYGD
Sbjct: 286 RFIFPPYEFKICNALLTNFHMPESTLLMMAAAFGGYDNVMNAYQEAIKHKYRFLSYGDAM 345
Query: 355 LL 356
L+
Sbjct: 346 LI 347
>gi|33862496|ref|NP_894056.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prochlorococcus marinus str. MIT 9313]
gi|46576943|sp|Q7V8V2|QUEA_PROMM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|33640609|emb|CAE20398.1| Queuosine biosynthesis protein [Prochlorococcus marinus str. MIT
9313]
Length = 371
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 139/358 (38%), Positives = 196/358 (54%), Gaps = 16/358 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D+ L P RIA PV PR SARL++V P P + V D L + D +V
Sbjct: 9 LLSSYDYPLDPERIAQLPVEPRHSARLLIVQPLGMKPPIARHAEVWDWQEELRAGDLLVI 68
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRV-SPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L + R ++ L + W RP+K ++ GD L +
Sbjct: 69 NDTRVLKARLR------VRRSGGGLAELLVLEPRGEGCWLCLGRPAKRLRPGDQL-WLEA 121
Query: 121 DGQSRLEATVI--DKWNTGEILLVFS--ISGIELERQISLVGTIPLPPYIARKRPIDARD 176
G+ + VI D + G ++ S + +LE + G +PLPPYI R P D+
Sbjct: 122 LGEEPIALQVISKDSASGGRVVQFPSHYANAEQLELLLERYGEVPLPPYIQRHDPSDSER 181
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
Y QT YA G+VAAPTAGLH + LL L G+ + VTLHVG GTF PV+ ED
Sbjct: 182 Y---QTRYASRPGAVAAPTAGLHLSDELLEALKQRGVMLTSVTLHVGLGTFRPVETEDLS 238
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNI 295
+HSE + +A+ + ++R GR+++VGTTS+R LE A G + + G ++
Sbjct: 239 HLQLHSEWVEVRDDVVEAVMACRARAGRVIAVGTTSVRALEGAALAGGGFLQSFCGPVDL 298
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
I PGYRF VD L++NFHLPKS+LL+LVSA G E +Y AI H YRF+SYGD
Sbjct: 299 VIQPGYRFAVVDGLLTNFHLPKSSLLLLVSAMVGRERLLALYAEAIEHQYRFFSYGDA 356
>gi|324016689|gb|EGB85908.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 117-3]
Length = 356
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 143/363 (39%), Positives = 207/363 (57%), Gaps = 27/363 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R S RL+ +L P ++ +DL LN D +
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLL----SLDGPTGALTHGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + R SK K G
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEVLVERMLDDKRILAHIRASKAPKPG--AELLL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARKRPIDAR 175
D +S + AT+ + +F + ER + + +G +PLPPYI RP +
Sbjct: 110 GDDES-INATMTARHGA-----LFEVE-FNDERSVLDILNSIGHMPLPPYI--DRPDEDA 160
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+
Sbjct: 161 DRELYQTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTI 220
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFT 293
+DHIMHSE + A+ + K+RG R+++ GTTS+R LE+A ++ +I P+ T
Sbjct: 221 EDHIMHSEYAEVPQDVVDAVLAAKARGNRVIAGGTTSVRSLESAAQAAKNDLIEPFFDDT 280
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFI PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD
Sbjct: 281 QIFIYPGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDA 340
Query: 354 SLL 356
+
Sbjct: 341 MFI 343
>gi|237749372|ref|ZP_04579852.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Oxalobacter
formigenes OXCC13]
gi|229380734|gb|EEO30825.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Oxalobacter
formigenes OXCC13]
Length = 348
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 146/354 (41%), Positives = 200/354 (56%), Gaps = 22/354 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDFDLP IA P+ R ++RL++V I+D L L+ D +VFN
Sbjct: 9 LSDFDFDLPEELIAQFPLPERSASRLLLVDEK-----KIADSRFYHLIDHLSEGDLLVFN 63
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NTKV+ A RF +I + + + R SK K G I+ D
Sbjct: 64 NTKVLKA-----RFFGSKASGGKIEILIERILDNRNALAKIRASKSPKAGSIIRI---DD 115
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ + T D GE ++ S I + + G +PLPPYI +R D+ D YQT
Sbjct: 116 EIDVSVTGRD----GEFFILQFPSDIF--KILEEHGHLPLPPYI--ERAADSFDEKRYQT 167
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
+A+ G+VAAPTAGLHF L+ +L GI ++TLHVGAGTF PV+ E+ +H MH+
Sbjct: 168 VFARELGAVAAPTAGLHFDDELMEKLRQKGISFAYLTLHVGAGTFQPVRSENLSEHQMHT 227
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I T +A+ + + ++V VGTTSLR LE+A ++ G + S T++FITPGY+
Sbjct: 228 EWYTIPEETVEAVKTAQQGKHKVVGVGTTSLRALESA-SQTGKLKAGSNETSLFITPGYQ 286
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
F+ VD L++NFHLPKSTLLMLVSAF G KK Y HAI+ YRF+SYGD LL
Sbjct: 287 FQTVDHLITNFHLPKSTLLMLVSAFAGYNLIKKAYAHAIAEKYRFFSYGDAMLL 340
>gi|77919491|ref|YP_357306.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pelobacter
carbinolicus DSM 2380]
gi|91207389|sp|Q3A3C1|QUEA_PELCD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|77545574|gb|ABA89136.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Pelobacter
carbinolicus DSM 2380]
Length = 343
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 137/361 (37%), Positives = 207/361 (57%), Gaps = 22/361 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF+LP IA P+ R ++RLMV++ ++ L ++ +D+ + D +V
Sbjct: 1 MRLSDFDFELPEELIAQHPLAQRQASRLMVLN-RVTQQLQLAQ--FADIADWFRPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREK----EISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
N+T+VI A+L I R++ E+ + W+ + SK + G L
Sbjct: 58 VNDTRVIPARL-------IGRKQTGGRIEVFLVRRLPGVEEVWACLTKCSKSPRPGTRLI 110
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
G+ LE TV++ + FS G + + + VG IPLPPYI R+ D R
Sbjct: 111 L----GEG-LEGTVVEGGEPPYRHVRFSFQG-DFSQVLEQVGRIPLPPYIRREATPDDRS 164
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT +A+ G+VAAPTAGLHFT +L L + G+++ +TLHVG GTF+P++ +D
Sbjct: 165 R--YQTVFAREAGAVAAPTAGLHFTDEILDVLRAKGVEIQPLTLHVGLGTFLPMRTDDIT 222
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+H MH E F+ TA A+N K G R++++GTTS R LE A E G + +G ++F
Sbjct: 223 EHRMHEENYFVPEGTAAAVNRAKDDGRRVIALGTTSTRTLEYAVDEQGRLQAGAGTCDLF 282
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PG++FR VD L++NFHLP STLL+LV+A G E + YQ A++ +RF+SYGD L+
Sbjct: 283 IRPGFKFRIVDGLVTNFHLPCSTLLVLVAALAGREFILEAYQRAVAEKFRFFSYGDCMLI 342
Query: 357 F 357
Sbjct: 343 L 343
>gi|229093489|ref|ZP_04224592.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock3-42]
gi|228689960|gb|EEL43764.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock3-42]
Length = 287
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 128/285 (44%), Positives = 173/285 (60%), Gaps = 14/285 (4%)
Query: 69 AQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEA 128
A+L+GV+ I L + + W +P+K +K+G ++ F G+ +L+A
Sbjct: 3 ARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF----GEGKLKA 54
Query: 129 TVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQ 188
T + G L FS GI E + +G +PLPPYI K ++ RD YQT YAK
Sbjct: 55 TCTGTADQGGRQLEFSYDGIFYE-ILDELGEMPLPPYI--KETLEDRD--RYQTVYAKEI 109
Query: 189 GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFID 248
GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H MH+E +
Sbjct: 110 GSAAAPTAGLHFTEELLEKLKQKGVELAFITLHVGLGTFRPVSADTIEEHHMHAEYYHMS 169
Query: 249 APTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITPGYRFRAVD 307
TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ PGY F+A+D
Sbjct: 170 EETAALLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYPGYEFKAID 229
Query: 308 ILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD
Sbjct: 230 GLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGD 274
>gi|167623484|ref|YP_001673778.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
halifaxensis HAW-EB4]
gi|189038879|sp|B0TND3|QUEA_SHEHH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|167353506|gb|ABZ76119.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Shewanella
halifaxensis HAW-EB4]
Length = 345
Score = 229 bits (585), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 141/368 (38%), Positives = 203/368 (55%), Gaps = 34/368 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N ++D +D+ +N D +V
Sbjct: 1 MRVADFSFELPDELIARYPTAERTASRLLSLDGNSG---ELTDLQFTDILEQVNLGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + + ++ + + + R SK K I+
Sbjct: 58 FNNTRVIPARMFGQK-----QSGGKLEILVERMLDDKRVLAHVRCSKSPKVDSIICL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQ--------ISLVGTIPLPPYIARKRPI 172
DG + I++ + ELE Q + VG +PLPPYI RP
Sbjct: 110 DGGYEM------------IMVARHDALFELELQSDKTILEVLEDVGHMPLPPYI--DRPD 155
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+ D YQT Y + G+VAAPTAGLHF +L+ L G+ FVTLHVGAGTF PV+V
Sbjct: 156 EDADKERYQTVYNQNPGAVAAPTAGLHFDDAMLAALKDKGVNTAFVTLHVGAGTFQPVRV 215
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSG 291
++ DH MHSE + + K+RG R+++VGTTS+R LE+A + +SG
Sbjct: 216 DNILDHKMHSEWAEVPQNVVDLIAETKTRGNRVIAVGTTSVRSLESAAKASPEQLEAFSG 275
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T+IFI PGY+F+ VD +++NFHLP+STL+ML+SAF G +E K YQHAI+ YRF+SYG
Sbjct: 276 DTDIFIYPGYQFQVVDAMVTNFHLPESTLIMLLSAFAGFDEVKNAYQHAIAQKYRFFSYG 335
Query: 352 DTSLLFQK 359
D + +K
Sbjct: 336 DAMFVTKK 343
>gi|308185876|ref|YP_003930007.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase [Pantoea
vagans C9-1]
gi|308056386|gb|ADO08558.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase [Pantoea
vagans C9-1]
Length = 432
Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 144/360 (40%), Positives = 207/360 (57%), Gaps = 27/360 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAI 59
M V +F F+LP S IA P R RL+ +L P +S + +D+ LN D +
Sbjct: 77 MRVADFAFELPESLIAHYPQAQRSGCRLL----SLDGPSGALSHGVFTDVLDKLNPGDLL 132
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A++ G + +I + + + R SK K G L
Sbjct: 133 VFNNTRVIPARVFGRK-----ASGGKIEMLVERMLDDKRVLAHVRASKAPKPGAEL-LLG 186
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARKRPIDAR 175
+D ++AT++ + + +F I+ + ER + + VG +PLPPYI RP +
Sbjct: 187 ED--ESVKATMVARHDA-----LFEIA-FDDERAVLDILNSVGHMPLPPYI--DRPDEEA 236
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y+ G+VAAPTAGLHF LL L GI++ FVTLHVGAGTF PV+VE
Sbjct: 237 DRELYQTVYSARPGAVAAPTAGLHFDEPLLQALKEKGIEMAFVTLHVGAGTFQPVRVETI 296
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFT 293
++H MH+E + A+ + K+RG ++V+VGTTS+R LE+A ++D +I P+ T
Sbjct: 297 EEHHMHAEYAEVPQEVVDAVLACKARGNKVVAVGTTSVRSLESAAKASQDALIAPFFDDT 356
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFI PGY ++ +D L++NFHLP+STL+MLVSAF G + T Y A++ YRF+SYGD
Sbjct: 357 QIFIYPGYEYQVIDALITNFHLPESTLIMLVSAFAGYQHTMAAYHAAVAEQYRFFSYGDA 416
>gi|149926708|ref|ZP_01914968.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Limnobacter
sp. MED105]
gi|149824637|gb|EDM83853.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Limnobacter
sp. MED105]
Length = 362
Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 149/371 (40%), Positives = 197/371 (53%), Gaps = 32/371 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EFDF+LP IA P R +RL+V N I D L + L ND +V
Sbjct: 5 MKLSEFDFNLPEQLIAQHPPEIRGESRLLVCENNKP----IEDRLFEHVLNLLGPNDVLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G + +I L + ++ R SK K G +
Sbjct: 61 INDTKVLKARLQGHKASG-----GKIEVMLERILDDKRFTAMIRASKSPKPGSEVVL--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+A V+ K + L + S + + G +PLPPYI + +A+D Y
Sbjct: 113 --AGVAKARVLSKHDMMYELELLESSLSLPDLLDAH-GALPLPPYI--EHNANAQDDERY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHFT LL ++ + G+K+ +TLHVGAGTF+PVK ++ D+H+M
Sbjct: 168 QTVFAREPGAVAAPTAGLHFTEQLLQQVQARGVKLLNLTLHVGAGTFLPVKTDNVDEHVM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-INPWSGF------- 292
HSE I A+ K GGR+V+VGTTSLR LE TE G +N G
Sbjct: 228 HSERYAISGAVIAAMIKAKENGGRVVAVGTTSLRALEAWATETGCNLNTTEGVGKAAEFA 287
Query: 293 -------TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAY 345
T IFI PGY F+ VD L++NFHLPKSTLLMLVSAF G Y HAI+ Y
Sbjct: 288 RSGHAGDTQIFIKPGYTFKVVDRLITNFHLPKSTLLMLVSAFAGKTNILNAYAHAIAQQY 347
Query: 346 RFYSYGDTSLL 356
RF+SYGD L
Sbjct: 348 RFFSYGDAMWL 358
>gi|261868461|ref|YP_003256383.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Aggregatibacter actinomycetemcomitans D11S-1]
gi|261413793|gb|ACX83164.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Aggregatibacter actinomycetemcomitans D11S-1]
Length = 363
Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 143/369 (38%), Positives = 207/369 (56%), Gaps = 29/369 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + I SD+ +N D ++
Sbjct: 1 MRVADFYFDLPDELIARYPKTERTASRLLQLDGENG---EIFHRTFSDVLDLINPGDLMI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + +S + + + R SK K+G L
Sbjct: 58 FNNTRVIPARMFGRKSSG-----GKIEVLVERVLSESRFLAHVRASKAPKEGAELIL--- 109
Query: 121 DGQSRL-EATVIDKWNTGEILLVFSISGIELERQISL------VGTIPLPPYIARKRPID 173
G+ +L E ++ G +F I E+Q +L +G +PLPPYI RP +
Sbjct: 110 -GEDKLGEGHGVNAVMVGRQGSLFEIE--IAEKQTALFDVLQKIGHMPLPPYI--DRPDE 164
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT Y K+ G+VAAPTAGLHF LL++L + G+ FVTLHVGAGTF PV+VE
Sbjct: 165 EADQERYQTVYNKVPGAVAAPTAGLHFDDELLTKLKAKGVNFTFVTLHVGAGTFQPVRVE 224
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDG----IIN 287
+ +DH+MH+E + A+ + + G R+++VGTTS+R +E+A E+ +I
Sbjct: 225 NIEDHVMHAEYVEVPQEVCDAILATQKAGKRVIAVGTTSVRSIESAALAAEEKKSAVLIE 284
Query: 288 PWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
P+ T+IFI PG FR VD L++NFHLP+STL+MLVSAF G T Y+ A+ + YRF
Sbjct: 285 PYFSDTSIFIYPGKSFRVVDCLITNFHLPESTLIMLVSAFAGFSYTMNAYKSAVENRYRF 344
Query: 348 YSYGDTSLL 356
+SYGD +
Sbjct: 345 FSYGDAMFI 353
>gi|134093583|ref|YP_001098658.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Herminiimonas arsenicoxydans]
gi|166216726|sp|A4G1Z2|QUEA_HERAR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|133737486|emb|CAL60529.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein QueA) [Herminiimonas
arsenicoxydans]
Length = 341
Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 148/359 (41%), Positives = 199/359 (55%), Gaps = 32/359 (8%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LP IA P+ R ++RL+ V + + D +D+ LN D +VFN
Sbjct: 4 LSDFDFELPQELIAQTPLAERSASRLLHVAQD-----GMIDRAFADIVDLLNPGDLLVFN 58
Query: 63 NTKVITAQLNGVRFCHINRR---EKEI-SCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
+T+V+ A+ GV+ E+ I S +H ++ + V P I+ D
Sbjct: 59 DTRVLKARFFGVKETGGKVEVLVERVIDSAHVHAQIRASKSPV---PGMKIRLADAF--- 112
Query: 119 SQDGQSRLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
VI GE L F L I G +PLPPYI + DA D
Sbjct: 113 ----------DVIVGERAGEFYELQFPGDIFAL---IEAHGRLPLPPYI--EHAADAYDE 157
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YAK G+VAAPTAGLHF LL L + G++ +VTLHVGAGTF PV+ E+ +
Sbjct: 158 TRYQTVYAKTPGAVAAPTAGLHFDQALLDTLKAKGVQFAYVTLHVGAGTFQPVRNENLAE 217
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MHSE I T A+++ ++ G IV+VGTTS+R LE+A ++ G + S T +FI
Sbjct: 218 HNMHSEWYTISQETVGAVHAAQAAGHNIVAVGTTSMRALESA-SQSGSLQAGSADTRLFI 276
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
TPGY F+ V L++NFHLPKSTLLMLVSAF G + + YQHAIS YRF+SYGD L
Sbjct: 277 TPGYTFKTVTRLITNFHLPKSTLLMLVSAFAGYDAIRAAYQHAISQRYRFFSYGDAMFL 335
>gi|134280132|ref|ZP_01766843.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 305]
gi|134248139|gb|EBA48222.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 305]
Length = 360
Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 144/364 (39%), Positives = 204/364 (56%), Gaps = 21/364 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
+ + +FDFDLPP IA + R ++RL+ V + N S P + D ++LPA + D +
Sbjct: 2 LTLSDFDFDLPPELIAQTALPERSASRLLEVDNTNPSAPPRLVDRRFAELPACVAPGDLL 61
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFN+TKV+ A+ G + +I + + R SK G L
Sbjct: 62 VFNDTKVLKARFFGRKASG-----GKIEVLIERVTGERTALAQIRASKSPPPGTTLTL-- 114
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ TV ++ L + ++R G +PLPPYI + DA D
Sbjct: 115 ---ADAFDVTVGERVEPFFTLHFPDDCLVLIKRH----GRLPLPPYI--EHAPDAADETR 165
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H
Sbjct: 166 YQTVFAANPGAVAAPTAGLHFDDAVLAALEARGVERATLTLHVGAGTFQPVRVENLAEHR 225
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN-PWSGF---TNI 295
MHSE + + + + ++RGGR++++GTTS+R LE A + P + T+I
Sbjct: 226 MHSESYELTDALVEKIAATRARGGRVIAIGTTSMRALEAAARDAQAAGRPLAATRAETDI 285
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFR VD L++NFHLPKSTLLMLVSAF GIE + Y+HAI YRF+SYGD L
Sbjct: 286 FITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGIETIRAAYRHAIDARYRFFSYGDAML 345
Query: 356 LFQK 359
L ++
Sbjct: 346 LTRR 349
>gi|108804168|ref|YP_644105.1| queuosine biosynthesis protein [Rubrobacter xylanophilus DSM 9941]
gi|122381818|sp|Q1AWD5|QUEA_RUBXD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|108765411|gb|ABG04293.1| Queuosine biosynthesis protein [Rubrobacter xylanophilus DSM 9941]
Length = 334
Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 142/358 (39%), Positives = 198/358 (55%), Gaps = 32/358 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVH-PNLSCPLVISDHLVSDLPAFLNSNDAI 59
M E D++LP IA RP PRD++RLMVV P+ IS H+ +LP FL D +
Sbjct: 1 MRTDELDYELPQELIAQRPAEPRDASRLMVVDVPSRG----ISHHVFRELPRFLGPGDVL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V N TKVI A+L R E+ L + +W ARPS+ ++ G + +
Sbjct: 57 VLNETKVIPARLFASRPGG-----GEVEL-LFLGERGGAWEALARPSRRLRPG--MPLSA 108
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+G+ RLE V+++ G L + G ++ + G +PLPPYI +A
Sbjct: 109 GEGE-RLE--VVEELGEGRWL----VRGRDVPGLLERAGRMPLPPYIEPTPEAEA----S 157
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ GS AAPTAG HFT +L + G ++ V LHVG GTF PV+ E +DH
Sbjct: 158 YQTVYARTPGSAAAPTAGFHFTGRVLRGVEEAGARIARVVLHVGLGTFAPVREERLEDHR 217
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH E + TA+A+ + R+V+VGTT +R LE+ G+ G + +FI P
Sbjct: 218 MHREYYAVPEETARAVEEAE----RVVAVGTTVVRTLES-WARSGVRE---GESELFIYP 269
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY +RAVD L++NFHLP+STLL LV +F G E ++ Y+ A+ YRFYS+GD LL
Sbjct: 270 GYEWRAVDALITNFHLPRSTLLALVMSFAGRELVREAYEVAVRERYRFYSFGDAMLLL 327
>gi|304395468|ref|ZP_07377351.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Pantoea sp.
aB]
gi|304356762|gb|EFM21126.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Pantoea sp.
aB]
Length = 356
Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 143/363 (39%), Positives = 207/363 (57%), Gaps = 27/363 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAI 59
M V +F F+LP S IA P R RL+ +L P +S + +D+ LN D +
Sbjct: 1 MRVADFAFELPESLIAHYPQAQRSGCRLL----SLDGPSGALSHGVFTDVLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A++ G + +I + + + R SK K G L
Sbjct: 57 VFNNTRVIPARVFGRKASG-----GKIEMLVERMLDDKRVLAHVRASKAPKPGAEL-LLG 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARKRPIDAR 175
+D ++AT++ + + +F I + ER + + VG +PLPPYI RP +
Sbjct: 111 ED--ESVKATMVARHDA-----LFEIV-FDDERAVLDILNSVGHMPLPPYI--DRPDEEA 160
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y+ G+VAAPTAGLHF LL L G+++ FVTLHVGAGTF PV+VE
Sbjct: 161 DRELYQTVYSARPGAVAAPTAGLHFDEPLLQALKEKGVEMAFVTLHVGAGTFQPVRVETI 220
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFT 293
++H MH+E + A+ + K+RG ++V+VGTTS+R LE+A ++D +I P+ T
Sbjct: 221 EEHHMHAEYAEVPQEVVDAVLACKARGNKVVAVGTTSVRSLESAAKASQDALIAPFFDDT 280
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFI PGY ++ +D L++NFHLP+STL+MLVSAF G + T Y A++ YRF+SYGD
Sbjct: 281 QIFIYPGYEYQVIDALITNFHLPESTLIMLVSAFAGYQHTMAAYHAAVAEQYRFFSYGDA 340
Query: 354 SLL 356
+
Sbjct: 341 MFI 343
>gi|145299556|ref|YP_001142397.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Aeromonas
salmonicida subsp. salmonicida A449]
gi|166216696|sp|A4SP27|QUEA_AERS4 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|142852328|gb|ABO90649.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase [Aeromonas
salmonicida subsp. salmonicida A449]
Length = 355
Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 137/365 (37%), Positives = 207/365 (56%), Gaps = 18/365 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R ++RL+ + + D+ LN D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPMAERTASRLLQLDGQSGA---LRHGQFVDVLDQLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + +S + R SK K G L
Sbjct: 58 FNNTRVIPARMFGQKAS-----GGKLEVLVERILDEHSVLAHVRASKAPKPGTRLILDGG 112
Query: 121 DGQSRLEATVIDKWNT-GEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+++A + + + EI + +E+ + +G +PLPPYI RP + D
Sbjct: 113 PDGEKVDAEMRARHDALFEIHFLDPRPVLEI---LEAIGHMPLPPYI--DRPDEDADKER 167
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y + G+VAAPTAGLHF LL+++ + G++ FVTLHVGAGTF PV+V+ +DH
Sbjct: 168 YQTVYNQKPGAVAAPTAGLHFDEPLLAKIRAKGVETAFVTLHVGAGTFQPVRVDKIEDHH 227
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGF---TNI 295
MHSE + A+ + ++RGGR+++VGTTS+R LE+A + P + F T+I
Sbjct: 228 MHSEYAEVPQEVVDAIAATRARGGRVIAVGTTSVRSLESAAKASLALSKPLAPFFSDTDI 287
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGY+F+ VD +++NFHLP+STL+MLVSAF G + YQ A++ YRF+SYGD
Sbjct: 288 FIFPGYQFQVVDAMVTNFHLPESTLIMLVSAFAGYDHVMAAYQAAVAEQYRFFSYGDAMF 347
Query: 356 LFQKR 360
+ ++R
Sbjct: 348 VTRRR 352
>gi|330721710|gb|EGG99709.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [gamma
proteobacterium IMCC2047]
Length = 349
Score = 229 bits (584), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 141/360 (39%), Positives = 198/360 (55%), Gaps = 22/360 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F +DLP IAL P R ++RL+ V S + SDLP ++ +D IV
Sbjct: 1 MQLSDFHYDLPKELIALYPQDERSASRLLCVDRETGG---TSHRIFSDLPELISPDDLIV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + ++ + NS R SK K G +
Sbjct: 58 FNNTKVMPARLYGHKATG-----GKVELLIERITDTNSAICQIRASKAPKPGMRI----- 107
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
S E ++ + + S L + G +PLPPYI R + D Y
Sbjct: 108 ---SIAENVWLEVTGREDSFFLISSGEQPLLMLLDEHGHMPLPPYIERDD--ENFDRERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF LL R+ +G+ + +VTLHVGAGT+ PV+V+D DH M
Sbjct: 163 QTLFAERPGAVAAPTAGLHFDEPLLQRIREMGVAIGYVTLHVGAGTYQPVRVDDIQDHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT---EDGI-INPWSGFTNIF 296
HSE +DA + + + + RGG++++VGTT +R LETA+ E G+ + P++G T+IF
Sbjct: 223 HSEYLEVDALVCEQIQACRDRGGKVIAVGTTCVRSLETASMKAREQGLEMAPYAGDTDIF 282
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PG F VD +++NFHLP+STLLMLVSAF E Y AI YRF+SYGD +
Sbjct: 283 IYPGKDFYCVDAMVTNFHLPESTLLMLVSAFTSREIMLAAYAEAIEERYRFFSYGDAMFI 342
>gi|149908740|ref|ZP_01897401.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Moritella
sp. PE36]
gi|149808282|gb|EDM68221.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Moritella
sp. PE36]
Length = 349
Score = 229 bits (584), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 143/361 (39%), Positives = 205/361 (56%), Gaps = 29/361 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+F LP IA P R S+RL+ ++ N S LV D +D+ + + D +V
Sbjct: 1 MQVSDFNFSLPDELIARYPKADRRSSRLLQLNGN-SGELV--DKQFADILDLVEAGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + +S +S + R SK K G L
Sbjct: 58 FNNTRVIPARMYGQKASG-----GKIEVLVERVISDHSVLAHVRSSKSPKVGAQLIL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARKRPIDARD 176
+ ++A +I + + +F + ++ ER + +G +PLPPYI RP + D
Sbjct: 110 --EGTVKAEMIARHDA-----LFELKFLD-ERHVLEILEDIGHMPLPPYI--DRPDEDSD 159
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT Y + G+VAAPTAGLHF LL L + FVTLHVGAGTF PV+V++
Sbjct: 160 KERYQTVYNEKPGAVAAPTAGLHFDEALLVELAEKDVNTAFVTLHVGAGTFQPVRVDNIL 219
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET---ATTEDGI-INPWSGF 292
DH MHSE + + K+ GGR+++VGTTS+R LE+ AT G+ + P+
Sbjct: 220 DHHMHSEYAEVSEEVVAKIAETKANGGRVIAVGTTSVRSLESAAQATMAKGLPLAPFFED 279
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T IFI PGY+F+ VD +++NFHLP+STL+ML+SAF G + YQHAI+ YRF+SYGD
Sbjct: 280 TEIFIYPGYKFQLVDAMITNFHLPESTLIMLLSAFAGYDHVMPAYQHAIAEKYRFFSYGD 339
Query: 353 T 353
Sbjct: 340 A 340
>gi|293390413|ref|ZP_06634747.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Aggregatibacter actinomycetemcomitans D7S-1]
gi|290950947|gb|EFE01066.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Aggregatibacter actinomycetemcomitans D7S-1]
Length = 363
Score = 229 bits (584), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 141/369 (38%), Positives = 205/369 (55%), Gaps = 29/369 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + I +D+ +N D ++
Sbjct: 1 MRVADFYFDLPDELIARYPKTERTASRLLQLDGENG---EIFHRTFADVLELINPGDLMI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + +S + + + R SK K+G L
Sbjct: 58 FNNTRVIPARMFGRKSSG-----GKIEVLVERVLSESRFLAHVRASKAPKEGTELIL--- 109
Query: 121 DGQSRL-EATVIDKWNTGEILLVFSISGIELERQISL------VGTIPLPPYIARKRPID 173
G+ +L E ++ G +F I E +Q +L +G +PLPPYI RP +
Sbjct: 110 -GEDKLGEGHGVNAVMVGRQGSLFEIEITE--KQTALFDVLQKIGHMPLPPYI--DRPDE 164
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT Y K+ G+VAAPTAGLHF LL++L + G+ FVTLHVGAGTF PV+VE
Sbjct: 165 EADQERYQTVYNKVPGAVAAPTAGLHFDDELLAKLNAKGVNFAFVTLHVGAGTFQPVRVE 224
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDG------IIN 287
+ +DH+MH+E + A+ + + G R+++VGTTS+R +E+A +I
Sbjct: 225 NIEDHVMHAEYVEVPQEVCDAILATQKAGKRVIAVGTTSVRSIESAALAAEQKKSAVLIE 284
Query: 288 PWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
P+ T+IFI PG FR VD L++NFHLP+STL+MLVSAF G T Y+ A+ + YRF
Sbjct: 285 PYFSDTSIFIYPGKSFRVVDCLITNFHLPESTLIMLVSAFAGFSHTMNAYKSAVENRYRF 344
Query: 348 YSYGDTSLL 356
+SYGD +
Sbjct: 345 FSYGDAMFI 353
>gi|288818534|ref|YP_003432882.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase/queuine
synthetase [Hydrogenobacter thermophilus TK-6]
gi|288787934|dbj|BAI69681.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase/queuine
synthetase [Hydrogenobacter thermophilus TK-6]
gi|308752124|gb|ADO45607.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Hydrogenobacter thermophilus TK-6]
Length = 334
Score = 229 bits (584), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 143/359 (39%), Positives = 206/359 (57%), Gaps = 27/359 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++FDF+LPP IA P+ R ARLMV++ I + +LP +L D +V
Sbjct: 1 MRLEDFDFELPPELIAKYPLKERHMARLMVLNRKDKS---IKHDIFWNLPLYLEEGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPS-KVIKKGDILHFFS 119
FNNTKVI A+L G + + L + + W YA S K I++G + + +
Sbjct: 58 FNNTKVIPARLYGKKPTG-----GRVEILLTDMLKEHLW--YALVSGKNIREG-LCVYIA 109
Query: 120 QDGQSRLEATVIDKWNTGEILL-VFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
QD L ++ + G+ L+ + S I + + G IP+PPY+ R+ + D V
Sbjct: 110 QD----LSVNILKHISEGKFLVELLSQDPI---KALYTYGHIPIPPYLEREE--EHIDRV 160
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT +A+ +GSVAAPTA LHF+ LL+RL GI+ F+TLHV GTF P+KV D +H
Sbjct: 161 YYQTVFAQKEGSVAAPTASLHFSEELLNRLDEYGIRKAFITLHVSYGTFKPIKVSDIREH 220
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
+ E + T + + VK G ++V+VGTT +R LET +P+SG T+++I
Sbjct: 221 KVDEEYMEVPEETVELIKKVKQEGKKVVAVGTTVVRALETKP-----FSPFSGKTDLYIY 275
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY F+ VD +++NFHLP+S+LL+LVSAF G E YQ AI YRFYSYGD L+
Sbjct: 276 PGYTFKVVDAMITNFHLPRSSLLLLVSAFAGREFILSAYQIAIKERYRFYSYGDGMLIL 334
>gi|15606227|ref|NP_213605.1| queuosine biosynthesis protein [Aquifex aeolicus VF5]
gi|3914538|sp|O67043|QUEA_AQUAE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|2983418|gb|AAC07001.1| queuosine biosynthesis protein [Aquifex aeolicus VF5]
Length = 334
Score = 229 bits (584), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 141/358 (39%), Positives = 202/358 (56%), Gaps = 25/358 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EFD++LP IA P PR SARLMV+ N + D + +LP +L D +V
Sbjct: 1 MRIEEFDYELPEELIAKYPAVPRHSARLMVL--NRKDQSIKHDTFI-NLPDYLEEGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L G + + L + P+ W K I+ G ++
Sbjct: 58 FNNTKVIPARLYGRKPTG-----GRVEVVLTDFIKPDEWKALIG-GKKIRPGLVIEV--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKR-PIDARDYVD 179
+ V++ G+ + + G E + I G IP+PPY+ R+ PID V
Sbjct: 109 --APDFKVEVLEHIEEGKFRV--KLLGEEPLKLIDKYGHIPIPPYLKREEEPIDR---VY 161
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +AK +G+VA+PTA LHF+ LL +L GI F+TLHV GTF PVKVE ++H
Sbjct: 162 YQTIFAKEKGAVASPTASLHFSEELLEKLKEKGINFAFITLHVSYGTFKPVKVERVEEHR 221
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
+ E I T + + K +G R+V+VGTT +R LET E P+ G+T+++I P
Sbjct: 222 VDPEYVKIPKETVEKIKETKEKGKRVVAVGTTVVRALETKPFE-----PFEGWTDLYIYP 276
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
G++F+ VD +++NFHLP+S+LL+LVSAF G E K Y+ A+ YRFYSYGD L+
Sbjct: 277 GFKFKVVDAMITNFHLPRSSLLILVSAFAGREFILKAYREAVEKRYRFYSYGDGMLIL 334
>gi|217076403|ref|YP_002334119.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Thermosipho
africanus TCF52B]
gi|226736744|sp|B7IFB4|QUEA_THEAB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|217036256|gb|ACJ74778.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Thermosipho
africanus TCF52B]
Length = 335
Score = 229 bits (584), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 139/357 (38%), Positives = 194/357 (54%), Gaps = 22/357 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+ LP IA P PRDS+RLMV++ I + D+ +L D +V
Sbjct: 1 MKLSDFDYYLPEELIAQTPAEPRDSSRLMVLNRKEKT---IEHRIFRDIVEYLKPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKVI A+L GV+ + L ++S W +P +KKG
Sbjct: 58 RNITKVIPARLYGVKETGAR-----VEILLLEKISEGVWEALVKPGSKVKKGT--KIILS 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+G +E D G +L F+ S + ++ +G PLPPYI ++ R Y
Sbjct: 111 EG---VEVICKDYSQQGARILEFNCS----DDKLFELGNAPLPPYIKNQKVPFER----Y 159
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GSVAAPTAGLHFT LL RL + G++ + LHVG GTF PVKVED +H M
Sbjct: 160 QTVYSKETGSVAAPTAGLHFTEELLERLRNKGLEFADLILHVGLGTFRPVKVEDIREHKM 219
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A T + + + GRI++VGTTS+R LET + G T+IFI P
Sbjct: 220 HSERYYVPAETVKKIRETRKNKGRIIAVGTTSVRTLETIARLPN-QESYHGKTDIFIYPP 278
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+ D +++NFHLPKSTLLMLV+AF G + + Y A+ YRF+S GD ++
Sbjct: 279 FEFKLTDAIITNFHLPKSTLLMLVAAFAGKDFILEAYNTAVKMKYRFFSLGDACFIY 335
>gi|325299411|ref|YP_004259328.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
salanitronis DSM 18170]
gi|324318964|gb|ADY36855.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
salanitronis DSM 18170]
Length = 351
Score = 229 bits (584), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 135/365 (36%), Positives = 197/365 (53%), Gaps = 20/365 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP RIAL PV RD +RLMVVH + I + D+ + + D +
Sbjct: 1 MKLSQFKFKLPEERIALHPVKYRDESRLMVVHKSTG---EIEHVIFKDILNYFDDQDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRRE----KEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
FN+TKV A+L G + R E +E++ L + W V P++ I+ G+ L+
Sbjct: 58 FNDTKVFPARLYGNKEKTGARIEVFLLRELNEELRL------WDVLVDPARKIRIGNKLY 111
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDA 174
F D + A VID + L F G E +R + +G PLPP+I +RP +
Sbjct: 112 FGDDDS---MVAEVIDNTTSRGRTLRFLYDGPHDEFKRALYALGEPPLPPFI--RRPAEP 166
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D +QT +AK +G+V P AGLHF+ L+ R+ GI F+T+H G G F + VED
Sbjct: 167 EDTERFQTIFAKNEGAVTVPAAGLHFSRELMKRMEIKGINFAFITMHCGLGCFRDIDVED 226
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
H M SE FI+A + +N+ K ++ +VGT+ +R +ETAT DG + + G+TN
Sbjct: 227 LTKHKMDSEQMFINAEACKIVNTAKDNDHKVCAVGTSVMRAVETATGTDGHLKEYEGWTN 286
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
FI P Y F D +++NFH+P ST+LML ++ G E YQ A+ YRF +YGD
Sbjct: 287 KFIFPPYDFVLPDAMVTNFHMPLSTMLMLTCSYGGYELIMDAYQMALKEDYRFGTYGDAM 346
Query: 355 LLFQK 359
L+ K
Sbjct: 347 LILNK 351
>gi|325677716|ref|ZP_08157368.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Ruminococcus albus 8]
gi|324110684|gb|EGC04848.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Ruminococcus albus 8]
Length = 355
Score = 229 bits (584), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 135/357 (37%), Positives = 193/357 (54%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ PR+++R++ + + V DH +L L D +V
Sbjct: 7 MKKSDFYYDLPQELIAQTPIEPRNASRMLCL--DRYTGEVGHDHFY-NLCDHLRKGDLLV 63
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+++V+ A++ G I L + W + RP K + G F
Sbjct: 64 LNDSRVLPARIYG----ETEDTHSFIEFLLVEQRGNLEWEILCRPGKKARVGRRFVF--- 116
Query: 121 DGQSRLEATVIDKWNTGEILLVFSIS-GIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G L A + + G + F L + +G +PLPPYI K +D
Sbjct: 117 -GGGLLRAEITEVLEDGNRIARFECDDSTNLFAALDEIGQMPLPPYITEK----LKDKER 171
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y+ GS AAPTAGLHFT L+ + ++G+ + +VTLHVG GTF PVK + DH
Sbjct: 172 YQTVYSNEIGSSAAPTAGLHFTKEQLADIEAMGVNIAYVTLHVGLGTFRPVKEDRVLDHK 231
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH E + A TA+ +N KS GGR+++VGTTS R LE+ G I P GFT IFI P
Sbjct: 232 MHREHYELPARTAELINKTKSEGGRVIAVGTTSCRTLESVAALYGDIRPCDGFTEIFIYP 291
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
G+ F+ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+S+GD+ +
Sbjct: 292 GFEFKVLDGLITNFHLPESTLIMLVSAFAGYDNTMNAYKIAVEEKYRFFSFGDSMFI 348
>gi|257094069|ref|YP_003167710.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257046593|gb|ACV35781.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 343
Score = 229 bits (584), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 142/357 (39%), Positives = 200/357 (56%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FDFDLP IA +P R ++RL+ + + D S+LP +++ D +V
Sbjct: 2 LTIDDFDFDLPTELIAQQPTPERTASRLLELADG-----GLHDRRFSELPQLVDAGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L F H +I + + R SK K G +
Sbjct: 57 FNDTRVIRARL----FGH-KESGGQIEVLIERIIDARHALAQIRASKSPKPGSRIVL--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGI-ELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ + V + ++G +L I G +PLPPYI D D
Sbjct: 109 --EDAIALNVCGRSGKHGEFFALELAGPGDLWTLIERHGRLPLPPYITHAAGSD--DEAR 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A+ G+VAAPTAGLHF LL +L + ++V ++TLHVGAGTF PV+V +H
Sbjct: 165 YQTVFARQPGAVAAPTAGLHFDDALLGQLAACSVEVAWLTLHVGAGTFQPVRVHAVAEHR 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH+E I T A+ ++R G++++VGTTSLR LE A +DG + + T+IFITP
Sbjct: 225 MHAERFEIPPATIAAIARTRARAGKVIAVGTTSLRALE-AAAQDGELRAGAAETDIFITP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GYRF+ VD L++NFHLPKSTLLMLVSAF G++ + Y HAI H YRF+SYGD LL
Sbjct: 284 GYRFQVVDRLITNFHLPKSTLLMLVSAFAGLDAIRTAYAHAIRHGYRFFSYGDAMLL 340
>gi|152968929|ref|YP_001334038.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|206577784|ref|YP_002240128.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Klebsiella
pneumoniae 342]
gi|238893341|ref|YP_002918075.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Klebsiella
pneumoniae NTUH-K2044]
gi|288936877|ref|YP_003440936.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Klebsiella
variicola At-22]
gi|290510067|ref|ZP_06549437.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Klebsiella
sp. 1_1_55]
gi|330006899|ref|ZP_08305771.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Klebsiella
sp. MS 92-3]
gi|166216728|sp|A6T5D7|QUEA_KLEP7 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|226713843|sp|B5Y0Y7|QUEA_KLEP3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|150953778|gb|ABR75808.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|206566842|gb|ACI08618.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Klebsiella
pneumoniae 342]
gi|238545657|dbj|BAH62008.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Klebsiella
pneumoniae subsp. pneumoniae NTUH-K2044]
gi|288891586|gb|ADC59904.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Klebsiella
variicola At-22]
gi|289776783|gb|EFD84781.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Klebsiella
sp. 1_1_55]
gi|328535653|gb|EGF62102.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Klebsiella
sp. MS 92-3]
Length = 354
Score = 229 bits (583), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 142/359 (39%), Positives = 205/359 (57%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R S RL+ +L P H +D+ LN D +
Sbjct: 1 MRVTDFAFELPESLIAHYPMPERSSCRLL----SLDGPTGALTHGTFTDILDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + R SK K G
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEVLVERMLDDKRILAHIRASKAPKPG--AELLL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
D +S ++AT++ + G + V + ++ +G +PLPPYI RP + D
Sbjct: 110 GDDES-IKATMLARH--GALFEVEFNDERPVLEILNGIGHMPLPPYI--DRPDEDADREL 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ ++H
Sbjct: 165 YQTVYGTRPGAVAAPTAGLHFDEPLLDKLRAKGVEMAFVTLHVGAGTFQPVRVDSIEEHT 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFI 297
MHSE + A+ + K+RG R+++VGTTS+R LE+A +D +I P+ T IFI
Sbjct: 225 MHSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKDALIAPFFDDTQIFI 284
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 285 YPGYQYQVIDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKVAVEQKYRFFSYGDAMFI 343
>gi|170703127|ref|ZP_02893943.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Burkholderia ambifaria IOP40-10]
gi|170131960|gb|EDT00472.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Burkholderia ambifaria IOP40-10]
Length = 416
Score = 229 bits (583), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 144/361 (39%), Positives = 201/361 (55%), Gaps = 21/361 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LPP IA + R ++RL+ V + P + D ++LP+ + D +VFN
Sbjct: 65 LSDFDFNLPPELIAQTALPERTASRLLEVDRTVE-PARLVDRNFAELPSCIAPGDLLVFN 123
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+V+ A RF +I + ++ R SK G L
Sbjct: 124 DTRVLKA-----RFFGQKASGGKIEVLIERVTGTHTALAQIRASKSPGAGTTLRL----- 173
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ TV ++ L F + L I G +PLPPYI + DA D YQT
Sbjct: 174 ADAFDVTVGERVEPF-FTLHFPQPCLTL---IEQHGRLPLPPYI--EHDADANDETRYQT 227
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA G+VAAPTAGLHF LL +L ++G++ +TLHVGAGTF PV+VE+ +H MHS
Sbjct: 228 VYASNPGAVAAPTAGLHFDLPLLEQLDAMGVERATLTLHVGAGTFQPVRVENIAEHRMHS 287
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGF---TNIFIT 298
E + + + ++RGG +++VGTTS+R LE A + D P + T+IFIT
Sbjct: 288 EWYDLPQSLVDKIAATRARGGNVIAVGTTSMRALEAAARSADEAGRPLAATQAETDIFIT 347
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGYRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI YRF+SYGD LL +
Sbjct: 348 PGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIRAAYRHAIDERYRFFSYGDAMLLTR 407
Query: 359 K 359
+
Sbjct: 408 R 408
>gi|254423170|ref|ZP_05036888.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus sp. PCC 7335]
gi|196190659|gb|EDX85623.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus sp. PCC 7335]
Length = 374
Score = 229 bits (583), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 133/354 (37%), Positives = 196/354 (55%), Gaps = 16/354 (4%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
+ + LP RIA PV PRD ++L+V+ P +L +L D ++FN+TK
Sbjct: 26 YSYLLPEGRIAQNPVTPRDHSKLLVI----DGPQSHRHSHFYNLGDWLMPGDLLIFNDTK 81
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSR 125
VI A+L G + + I T+ R W RP + I G + F Q
Sbjct: 82 VIPARLYGQKVSGASVEVLLIEPTVDDR-----WLALVRPGRRIPPGTEI-VFGDSAQPL 135
Query: 126 LEATVI--DKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTT 183
+ A V D+ G I+ + ++ I +G +PLPPYI + + YQT
Sbjct: 136 MSALVESRDESTGGRIIRLLPKVDKTIDALIHQLGQMPLPPYITESTSLPEQ----YQTV 191
Query: 184 YAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSE 243
+A+ QG++AAPTAGLHFT +LL +L + GI+ +TLHVG GTF PV+V D + H MH E
Sbjct: 192 FAQKQGAIAAPTAGLHFTQSLLDKLNAKGIQTAEITLHVGIGTFRPVEVSDIETHEMHKE 251
Query: 244 IGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRF 303
+ A T + + K+ GGR+++VGTTS R LE G + P+ G T++FI PGY++
Sbjct: 252 RIEVSAETVKRIKKTKANGGRVITVGTTSTRALEGVAAICGELQPYRGKTDLFIYPGYQW 311
Query: 304 RAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ +D +++NFHLP S+LLM++SA G + +YQ AI YRFYS+GD L+
Sbjct: 312 QVIDGMITNFHLPGSSLLMMISALVGRKRLMTVYQAAIEQDYRFYSFGDAMLIL 365
>gi|91781856|ref|YP_557062.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia xenovorans LB400]
gi|123063204|sp|Q145H9|QUEA_BURXL RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|91685810|gb|ABE29010.1| Queuosine biosynthesis protein [Burkholderia xenovorans LB400]
Length = 352
Score = 229 bits (583), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 147/381 (38%), Positives = 206/381 (54%), Gaps = 54/381 (14%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVH--PNLSCPLVISDHLVSDLPAFLNSNDA 58
+ + +FDFDLPP IA + R ++RL+ V + P + D ++LP + + D
Sbjct: 2 LTLSDFDFDLPPELIAQVALPERSASRLLEVDNPAGATGPARLIDRRFAELPDCIAAGDL 61
Query: 59 IVFNNTKVITAQLNGVRFCH------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKG 112
+VFN+TKV+ A+ G + + R E + +R S + +P I+
Sbjct: 62 LVFNDTKVLKARFLGQKASGGKIEVLVERLTGERTALAQIRASKSP-----QPGTTIRLA 116
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
D F R+E L F + L Q G +PLPPYI +
Sbjct: 117 DA---FDVTVGERVEPFYT---------LHFPADCLTLIEQF---GRLPLPPYI--EHDP 159
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
DA D YQT +A+ G+VAAPTAGLHF LL+RL + G++ +TLHVGAGTF PV+V
Sbjct: 160 DATDETRYQTVFAQNPGAVAAPTAGLHFDEALLARLDAAGVERATLTLHVGAGTFQPVRV 219
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSL--------------RLLET 278
E+ +H MHSE + A + + ++RG R+++VGTTS+ R L
Sbjct: 220 ENLAEHKMHSEWYHLPQSLADKIAATRARGNRVIAVGTTSMRALEAAARDAEAAGRPLAA 279
Query: 279 ATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQ 338
A+TE T+IFITPGYRFR VD L++NFHLPKSTLLMLVSAF G+E ++ Y+
Sbjct: 280 ASTE----------TDIFITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIREAYR 329
Query: 339 HAISHAYRFYSYGDTSLLFQK 359
HAI YRF+SYGD LL ++
Sbjct: 330 HAIEARYRFFSYGDAMLLTRR 350
>gi|238918971|ref|YP_002932485.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Edwardsiella ictaluri 93-146]
gi|259551449|sp|C5BCF6|QUEA_EDWI9 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|238868539|gb|ACR68250.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase, putative
[Edwardsiella ictaluri 93-146]
Length = 357
Score = 229 bits (583), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 142/360 (39%), Positives = 200/360 (55%), Gaps = 27/360 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLV-SDLPAFLNSNDAI 59
M V +F F+LP IA P R RL+ +L P H V +D+ LN D +
Sbjct: 1 MRVSDFTFELPDELIARYPQEQRSGCRLL----SLDGPTGARQHGVFTDIVDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + ++ + + + R SK K G L
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKVEVLVERVLDRTRVLAHVRASKAPKPGAGLLLGD 111
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARKRPIDAR 175
+ + AT++ + + +F + G + R + + G +PLPPYI RP +
Sbjct: 112 NED---IRATMLARHDA-----LFEL-GFDDPRDVLTILNAAGHMPLPPYI--DRPDEEA 160
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y+ G+VAAPTAGLHF LL RL G+++ FVTLHVGAGTF PV+VE
Sbjct: 161 DRELYQTVYSSRPGAVAAPTAGLHFDQPLLDRLRDKGVEMAFVTLHVGAGTFQPVRVESI 220
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT--EDGIINPWSGFT 293
+DH+MHSE + A+ + K+RG R+++VGTTS+R LE+A + +I P+ T
Sbjct: 221 EDHVMHSEYAEVPQEVVDAVLACKARGNRVIAVGTTSVRSLESAAAANKQALIAPFFDDT 280
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFI PGY ++ +D L++NFHLP+STL+MLVSAF G T Y+ A+ YRF+SYGD
Sbjct: 281 QIFIYPGYHYQVIDALITNFHLPESTLIMLVSAFAGYRHTLDAYRDAVVQQYRFFSYGDA 340
>gi|194445819|ref|YP_002039645.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Newport str. SL254]
gi|238693537|sp|B4SWP5|QUEA_SALNS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|194404482|gb|ACF64704.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Newport str. SL254]
Length = 354
Score = 229 bits (583), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 145/359 (40%), Positives = 202/359 (56%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P R RL+ +L P H +DL LN D +
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLL----SLEGPTGALTHGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEVLVERMLDDKRILAHIRASKAPKPGTEL--LL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
D +S + AT+ + G + V + ++ +G +PLPPYI RP + D
Sbjct: 110 GDDES-IHATMTARH--GALFEVEFNDPRPVLDILNAIGHMPLPPYI--DRPDEDADREL 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y++ G+VAAPTAGLHF LL+ L G+++ FVTLHVGAGTF PV+V+ +DHI
Sbjct: 165 YQTVYSEKPGAVAAPTAGLHFDEPLLAALREKGVEMAFVTLHVGAGTFQPVRVDTIEDHI 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFI 297
MHSE + A+ K RG R+++VGTTS+R LE+A + +I P+ G T IFI
Sbjct: 225 MHSEYAEVPQEVVDAVLVAKVRGNRVIAVGTTSVRSLESAAQAAKSDLIEPFFGDTQIFI 284
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 285 YPGYQYKVIDALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQKYRFFSYGDAMFI 343
>gi|312795166|ref|YP_004028088.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia rhizoxinica HKI 454]
gi|312166941|emb|CBW73944.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)
[Burkholderia rhizoxinica HKI 454]
Length = 359
Score = 229 bits (583), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 141/358 (39%), Positives = 200/358 (55%), Gaps = 24/358 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDFDLPP IA + R ++RL+ V P+ + + D +LPA L D +VFN
Sbjct: 13 LSDFDFDLPPELIAQHALPERSASRLLEVTPSGA----LLDRHFGELPACLEPGDLLVFN 68
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKV+ A+ +G++ + + P + R SK G + D
Sbjct: 69 DTKVLKARFDGIKAS-----GGRVEVLIERVTGPRTALAQIRASKRPAPGSTIRL--ADA 121
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
++ ++T L F IEL I G +PLPPYI + D D YQT
Sbjct: 122 FDVTVGERVEPFHT----LHFPHDCIEL---IDQHGRLPLPPYI--EHTPDTYDEARYQT 172
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
+A G+VAAPTAGLHF + L+ L + G++ +TLHVGAGTF PV+ +D H MHS
Sbjct: 173 VFATTPGAVAAPTAGLHFDAPTLAALDARGVRRATLTLHVGAGTFQPVRTDDIAQHKMHS 232
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE---DG-IINPWSGFTNIFIT 298
E I +A+ + ++ +++VGTTS+R LE A + DG ++ T+IFIT
Sbjct: 233 EWYNIPPALVEAIEATRAAKRSVIAVGTTSMRALEAAARDAERDGRELHAVRAETDIFIT 292
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY FR +D L++NFHLPKSTLLMLVSAF G+E ++ Y+HAI+ YRF+SYGD LL
Sbjct: 293 PGYPFRVIDRLVTNFHLPKSTLLMLVSAFAGVEPIRRAYRHAIAQRYRFFSYGDAMLL 350
>gi|295675565|ref|YP_003604089.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Burkholderia sp. CCGE1002]
gi|295435408|gb|ADG14578.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Burkholderia sp. CCGE1002]
Length = 352
Score = 228 bits (582), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 150/363 (41%), Positives = 202/363 (55%), Gaps = 22/363 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLV--ISDHLVSDLPAFLNSNDAIV 60
+ +FDFDLPP IA + R ++RL+ V + + D ++LP L D +V
Sbjct: 4 LSDFDFDLPPELIAQVALPERSASRLLDVDAAGTADGAARLIDRRFTELPERLAPGDLLV 63
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKV+ A RF +I + S R SK + G +
Sbjct: 64 FNDTKVLKA-----RFFGQKASGGKIEVLVERLTGERSALAQIRASKSPQAGTTIRL--A 116
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D +D++ T L F + L I G +PLPPYI + DA D Y
Sbjct: 117 DAFDVTVGERVDQFYT----LHFPDDCLTL---IEQYGRLPLPPYI--EHDPDATDETRY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL+RL ++GI+ +TLHVGAGTF PV+VE+ +H M
Sbjct: 168 QTVYAQNPGAVAAPTAGLHFDDALLARLDALGIERATLTLHVGAGTFQPVRVENIAEHKM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI----INPWSGFTNIF 296
HSE + A + + K+RG R+++VGTTS+R LE A + + S T+IF
Sbjct: 228 HSEWYHLPQALADKIAATKARGNRVIAVGTTSMRALEAAARDAEAAGHPLAAASAETDIF 287
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI YRF+SYGD LL
Sbjct: 288 ITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIRAAYRHAIDERYRFFSYGDAMLL 347
Query: 357 FQK 359
++
Sbjct: 348 TRR 350
>gi|172059699|ref|YP_001807351.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia ambifaria MC40-6]
gi|238689181|sp|B1YTH0|QUEA_BURA4 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|171992216|gb|ACB63135.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Burkholderia ambifaria MC40-6]
Length = 355
Score = 228 bits (582), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 144/361 (39%), Positives = 201/361 (55%), Gaps = 21/361 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LPP IA + R ++RL+ V + P + D +LP+ + D +VFN
Sbjct: 4 LSDFDFNLPPELIAQTALPERTASRLLEVDHTVE-PARLVDRNFVELPSCIAPGDLLVFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+V+ A+ G + +I + ++ R SK G L
Sbjct: 63 DTRVLKARFFGQKASG-----GKIEVLIERVTGTHTALAQIRASKSPGAGTTLRL----- 112
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ TV ++ L F + L I G +PLPPYI + DA D YQT
Sbjct: 113 ADAFDVTVGERVEPF-FTLHFPQPCLTL---IEQHGRLPLPPYI--EHDADASDETRYQT 166
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA G+VAAPTAGLHF LL RL ++G++ +TLHVGAGTF PV+VE+ +H MHS
Sbjct: 167 VYASNPGAVAAPTAGLHFDLPLLERLDAMGVERATLTLHVGAGTFQPVRVENIAEHRMHS 226
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGF---TNIFIT 298
E + + + ++RGG +++VGTTS+R LE A + D P + T+IFIT
Sbjct: 227 EWYDLPQSLVDKIAATRARGGNVIAVGTTSMRALEAAARSADEAGRPLAATQAETDIFIT 286
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGYRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI YRF+SYGD LL +
Sbjct: 287 PGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIRAAYRHAIDQRYRFFSYGDAMLLTR 346
Query: 359 K 359
+
Sbjct: 347 R 347
>gi|171320041|ref|ZP_02909111.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Burkholderia ambifaria MEX-5]
gi|171094700|gb|EDT39744.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Burkholderia ambifaria MEX-5]
Length = 416
Score = 228 bits (582), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 146/363 (40%), Positives = 204/363 (56%), Gaps = 25/363 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LPP IA + R ++RL+ V + P + D ++LP+ + D +VFN
Sbjct: 65 LSDFDFNLPPELIAQTALPERTASRLLEVDHTVE-PARLVDRNFAELPSCIAPGDLLVFN 123
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+V+ A RF +I + ++ R SK G L
Sbjct: 124 DTRVLKA-----RFFGQKASGGKIEVLIERVTGTHTALAQIRASKSPGAGTTLRL----- 173
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ TV ++ L F + L I G +PLPPYI + DA D YQT
Sbjct: 174 ADAFDVTVGERVEPF-FTLHFPQPCLTL---IEQHGRLPLPPYI--EHDADANDETRYQT 227
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA G+VAAPTAGLHF LL +L ++G++ +TLHVGAGTF PV+VE+ +H MHS
Sbjct: 228 VYASNPGAVAAPTAGLHFDLPLLEKLDAMGVERATLTLHVGAGTFQPVRVENIAEHRMHS 287
Query: 243 EIGFIDAPTA--QALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGF---TNIF 296
E + D P + + + ++RGG +++VGTTS+R LE A + D P + T+IF
Sbjct: 288 E--WYDLPQSLIDKIAATRARGGNVIAVGTTSMRALEAAARSADEAGRPLAATQAETDIF 345
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI YRF+SYGD LL
Sbjct: 346 ITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIRAAYRHAIDERYRFFSYGDAMLL 405
Query: 357 FQK 359
++
Sbjct: 406 TRR 408
>gi|297181899|gb|ADI18076.1| s-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [uncultured Acidobacteriales bacterium
HF0200_23L05]
Length = 347
Score = 228 bits (582), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 145/358 (40%), Positives = 198/358 (55%), Gaps = 12/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EF F LP IA RD+ARLM + I H VSDL L D IV
Sbjct: 1 MDLSEFGFHLPDELIAQEAEPTRDAARLMRLDRKTG---EIEHHCVSDLADLLKPGDLIV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+++VI A+L G R + E C L R+ W+ P + +++G F +
Sbjct: 58 VNDSRVIPARLLGRRDPGGGKAE----CLLLSRLDETRWNALVHPGQKLRQGARAVF--E 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ LE V+D G + SG ++E I +G PLPPYI KR + + D Y
Sbjct: 112 AGEHYLELEVLDCHFHGRRTIRLVSSGDDIETAIDAIGHTPLPPYI--KREVQSVDRERY 169
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ GSVAAPTAGLHFT LL+RLI+ GI +TLHVG GTF PV+ E +DH +
Sbjct: 170 QTIFARKPGSVAAPTAGLHFTPELLARLITRGISRQAITLHVGYGTFEPVRTEKVEDHRV 229
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
+E ++ TA+A+N G RI++VGTT+ R LE A G + P G T+++I
Sbjct: 230 AAEHYYVSEGTAEAVNCALDEGRRIIAVGTTTTRTLEAVARLNGGRLRPGEGQTDLYIHG 289
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F V L++NFHLP+S+LL+L +AF G E + Y AI+ YRFYSYGD L+
Sbjct: 290 SFDFEVVGGLLTNFHLPRSSLLLLAAAFAGHERLLEAYGQAIARCYRFYSYGDAMLIL 347
>gi|254468638|ref|ZP_05082044.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [beta
proteobacterium KB13]
gi|207087448|gb|EDZ64731.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [beta
proteobacterium KB13]
Length = 347
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 140/363 (38%), Positives = 197/363 (54%), Gaps = 29/363 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EF++ LP IA P R +RL+ ++PN I D+ ++ + +N ND +V
Sbjct: 1 MNIEEFNYTLPEELIAQHPTDERSDSRLLQLNPNTEE---IIDNNFTNFLSLINQNDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKG--DILHFF 118
FN+TKVI A+++G + + ++ + ++ NS+ + SK I G ++ F
Sbjct: 58 FNDTKVIKARIHGHK-----KSGGKVEVLIEKIINQNSFVGHIGTSKKINAGLEIMVGNF 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ R E I + N +F+I I G +PLPPYI R D D+
Sbjct: 113 KLTVKDRDENMFIIETNDD----IFNI--------IDCHGKLPLPPYINR----DNEDFD 156
Query: 179 D--YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
D YQT +AK G++AAPTAGLHF L F+TLHVG+GTF PV+ +
Sbjct: 157 DDRYQTVFAKHDGAIAAPTAGLHFDDQFFLELSKQNFNFSFITLHVGSGTFQPVRNSNIT 216
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
DH MHSE I + K GGRI+++GTT LR LE+A + + + TNIF
Sbjct: 217 DHKMHSEEFMISQDVYDRIEQTKKNGGRIIAIGTTVLRALESAFAQPKKDSNFQK-TNIF 275
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+F+ VD L +NFHLPKSTL+MLVSAF G T Y HA+ YRF+SYGD +
Sbjct: 276 IYPGYQFKIVDSLFTNFHLPKSTLIMLVSAFAGHSFTMTAYAHAVKEKYRFFSYGDAMFI 335
Query: 357 FQK 359
QK
Sbjct: 336 EQK 338
>gi|163749711|ref|ZP_02156957.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
benthica KT99]
gi|161330524|gb|EDQ01482.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
benthica KT99]
Length = 345
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 138/361 (38%), Positives = 204/361 (56%), Gaps = 20/361 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V ++ F+LP IA P R ++RL+ + N ++D +D+ +N D +V
Sbjct: 1 MRVSDYSFELPDELIARYPTAERTASRLLSLDGNTGQ---VTDKRFTDILNMVNPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + + ++ + + S + R SK K I+
Sbjct: 58 FNNTRVIPARLFGKK-----QTGGKLELLVERMLDDKSILAHVRCSKSPKVDSIICL--- 109
Query: 121 DGQSRLEATVIDKWNT-GEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
DG E ++ + + E+ L+ + +E+ + VG +PLPPYI RP + D
Sbjct: 110 DGG--YEMIMLARHDALFELKLLSDKTILEV---LEDVGHMPLPPYI--DRPDEDADKER 162
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y K G+VAAPTAGLHF + +L L G+ FVTLHVGAGTF PVKV++ +H
Sbjct: 163 YQTVYNKTPGAVAAPTAGLHFDNAMLKALADKGVDAAFVTLHVGAGTFQPVKVDNILEHK 222
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFIT 298
MHSE + + K+ G R+++VGTTS+R LE+A + + T+IFI
Sbjct: 223 MHSEWAEVTQEVVDKVRQTKANGKRVIAVGTTSVRSLESAAKASSAELEAFCSDTDIFIY 282
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY F+ VD +++NFHLP+STL+ML+SAF G +E K Y+HAI+ YRF+SYGD + +
Sbjct: 283 PGYEFQVVDAMVTNFHLPESTLIMLLSAFAGFDEVKNAYRHAIAQKYRFFSYGDAMFVTK 342
Query: 359 K 359
K
Sbjct: 343 K 343
>gi|62179016|ref|YP_215433.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|75484605|sp|Q57SF9|QUEA_SALCH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|62126649|gb|AAX64352.1| S-adenosylmethionine-tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|322713475|gb|EFZ05046.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Choleraesuis str. A50]
Length = 354
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 144/359 (40%), Positives = 203/359 (56%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P R RL+ +L P H +DL LN D +
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLL----SLEGPTGALTHGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEVLVERMLDDKRILAHIRASKAPKPGTEL--LL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
D +S + AT+ + G + V + ++ +G +PLP YI RP + D
Sbjct: 110 GDDES-IHATMTARH--GALFEVEFNDPRPVLDILNAIGHMPLPQYI--DRPDEDADREL 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y++ G+VAAPTAGLHF LL+ L G+++ FVTLHVGAGTF PV+V+ +DHI
Sbjct: 165 YQTVYSEKPGAVAAPTAGLHFDEPLLAALREKGVEMAFVTLHVGAGTFQPVRVDTIEDHI 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFI 297
MHSE + A+ + K+RG R+++VGTTS+R LE+A + +I P+ G T IFI
Sbjct: 225 MHSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKSDLIEPFFGDTQIFI 284
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 285 YPGYQYKVIDALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQKYRFFSYGDAMFI 343
>gi|218708620|ref|YP_002416241.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
splendidus LGP32]
gi|254764290|sp|B7VJR7|QUEA_VIBSL RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|218321639|emb|CAV17591.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
splendidus LGP32]
Length = 350
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 143/365 (39%), Positives = 206/365 (56%), Gaps = 23/365 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N ++D D+ + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQEERTASRLLKLDGNNGN---LADGSFKDVLDLVEPGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + S + R SK K G L
Sbjct: 58 FNNTRVIPARVFGRKASG-----GKLEVLVERMLDEKSILAHVRCSKSPKPGTKLFLGEN 112
Query: 121 DGQSRLEATVIDKWNT-GEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
D EA ++ + + EI S +E+ ++ VG +PLPPYI RP + D
Sbjct: 113 D---EYEAEMVARHDALFEIHFTSDQSVLEI---LNSVGHMPLPPYI--DRPDEDADKER 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y + G+VAAPTAGLHF L++ + G++ +VTLHVGAGTF PVKV++ +DH
Sbjct: 165 YQTVYNEKPGAVAAPTAGLHFDDKLMADMKEKGVEFAYVTLHVGAGTFQPVKVDNINDHH 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN-----PWSGFTN 294
MH+E + A+ + K+RGGRI++VGTTS+R LE+A +D + N P+ G T
Sbjct: 225 MHAEYVEVPQEVVDAVAAAKARGGRIIAVGTTSVRSLESA-AQDAVKNGTELVPFFGDTE 283
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PGY ++ VD L++NFHLP+STL+MLVSAF G + Y HA+ YRF+SYGD
Sbjct: 284 IFIFPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYDNVMGAYDHAVKSEYRFFSYGDAM 343
Query: 355 LLFQK 359
+ +K
Sbjct: 344 FINKK 348
>gi|294635291|ref|ZP_06713790.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Edwardsiella tarda ATCC 23685]
gi|291091325|gb|EFE23886.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Edwardsiella tarda ATCC 23685]
Length = 357
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 146/362 (40%), Positives = 204/362 (56%), Gaps = 31/362 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLV-SDLPAFLNSNDAI 59
M V +F F+LP IA P R + RL+ +L P +H V +D+ L D +
Sbjct: 1 MRVSDFTFELPDELIARYPQAQRSACRLL----SLDGPTGKREHGVFTDIVDKLQPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREK--EISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
VFNNT+VI A+L G R+E +I + + + R SK K G L
Sbjct: 57 VFNNTRVIPARLFG-------RKESGGKIEVLVERVLDRARVLAHVRASKAPKPGAALLL 109
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARKRPID 173
+ + AT++ + +T +F + G E ER + + G +PLPPYI RP D
Sbjct: 110 GDNE---EIRATMLARHDT-----LFEL-GFEDERDVLTILNAAGHMPLPPYI--DRPDD 158
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT Y+ G+VAAPTAGLHF LL RL + G+++ FVTLHVGAGTF PV+VE
Sbjct: 159 EADRELYQTVYSTRPGAVAAPTAGLHFDQPLLDRLRAKGVEMAFVTLHVGAGTFQPVRVE 218
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLR--LLETATTEDGIINPWSG 291
+DH+MHSE + A+ + K+RG R+++VGTTS+R A ++ +I P+
Sbjct: 219 SIEDHVMHSEYAEVPQAVVDAVLACKARGNRVIAVGTTSVRSLESAAAASQSALIAPFFD 278
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T IFI PGY ++ +D L++NFHLP+STL+MLVSAF G T Y A++ YRF+SYG
Sbjct: 279 DTQIFIYPGYHYQVIDALITNFHLPESTLIMLVSAFAGYRHTLDAYHEAVAQQYRFFSYG 338
Query: 352 DT 353
D
Sbjct: 339 DA 340
>gi|311748337|ref|ZP_07722122.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Algoriphagus sp. PR1]
gi|126576845|gb|EAZ81093.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Algoriphagus sp. PR1]
Length = 349
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 141/362 (38%), Positives = 197/362 (54%), Gaps = 18/362 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F++P ++L P RD +RLMV+H + I + D+ + D V
Sbjct: 1 MKLSDFKFEVPKKLVSLYPAENRDESRLMVLHRDTGK---IEHRVFKDITEYFGEGDVFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
N+TKV A+L G + + EI L ++P W V P++ I+ G+ L+F
Sbjct: 58 TNDTKVFPARLYGNK----EKTGAEIEVFLLRELNPELRLWDVLVDPARKIRVGNKLYF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELE--RQISLVGTIPL-PPYIARKRPIDAR 175
G S L A VID + + F G E E + I +G PL +I RK ++
Sbjct: 113 ---GDSDLVAEVIDNTTSRGRTIRFLFDGTEEEFHKTIDTLGETPLLKEFIERK--VETE 167
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT +AK G+VAAPTAGLHFT +LL RL G++V +TLHVG GTF V VED
Sbjct: 168 DRERYQTVFAKNVGAVAAPTAGLHFTPHLLKRLELQGVEVSPITLHVGLGTFRQVDVEDL 227
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
H M SE I T +N R+V+VGTTSL+ +E++ T +G + G+T+
Sbjct: 228 TKHKMDSENYNIPEGTVSLVNKALDEKKRVVAVGTTSLKTVESSVTANGRLKASQGWTDK 287
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI P Y F+ + L++NFHLP+STLLM SAF G + K Y+ AI YRF+SYGD L
Sbjct: 288 FIIPPYEFKIANALITNFHLPESTLLMTASAFGGYDLVMKAYKEAIKEKYRFFSYGDAML 347
Query: 356 LF 357
+
Sbjct: 348 IL 349
>gi|84387606|ref|ZP_00990623.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
splendidus 12B01]
gi|84377451|gb|EAP94317.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
splendidus 12B01]
Length = 350
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 143/365 (39%), Positives = 206/365 (56%), Gaps = 23/365 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N ++D D+ + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQEERTASRLLKLDGNSGN---LADGSFKDVLDLVEPGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + S + R SK K G L
Sbjct: 58 FNNTRVIPARVFGRKASG-----GKLEVLVERMLDEKSILAHVRCSKSPKPGSKLFLGEN 112
Query: 121 DGQSRLEATVIDKWNT-GEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
D EA ++ + + EI S +E+ ++ VG +PLPPYI RP + D
Sbjct: 113 D---EYEAEMVARHDALFEIHFTSDQSVLEI---LNSVGHMPLPPYI--DRPDEDADKER 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y + G+VAAPTAGLHF L++ + G++ +VTLHVGAGTF PVKV++ +DH
Sbjct: 165 YQTVYNEKPGAVAAPTAGLHFDDKLMAGMKEKGVEFAYVTLHVGAGTFQPVKVDNINDHH 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN-----PWSGFTN 294
MH+E + A+ + K+RGGRI++VGTTS+R LE+A +D + N P+ G T
Sbjct: 225 MHAEYVEVPQEVVDAVAAAKARGGRIIAVGTTSVRSLESA-AQDALRNGTELVPFFGDTE 283
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PGY ++ VD L++NFHLP+STL+MLVSAF G + Y HA+ YRF+SYGD
Sbjct: 284 IFIFPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYDNVMGAYDHAVKSEYRFFSYGDAM 343
Query: 355 LLFQK 359
+ +K
Sbjct: 344 FINKK 348
>gi|313109242|ref|ZP_07795210.1| LOW QUALITY PROTEIN: S-adenosylmethionine:trna
ribosyltransferase-isomerase [Pseudomonas aeruginosa
39016]
gi|310881712|gb|EFQ40306.1| LOW QUALITY PROTEIN: S-adenosylmethionine:trna
ribosyltransferase-isomerase [Pseudomonas aeruginosa
39016]
Length = 338
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 149/354 (42%), Positives = 203/354 (57%), Gaps = 40/354 (11%)
Query: 10 LPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAIVFNNTKVIT 68
+P + IA P+ R ++RL+ L P ++ +DL +L D +VFNNT+VI
Sbjct: 1 MPEALIARHPLPERRASRLLA----LDGPTGTLAHRQFADLLDYLRPGDLMVFNNTRVIP 56
Query: 69 AQLNGVRFCHINRREKEISCTLHMRVS----PNSWSVYARPSKVIKKGDILHFFSQDGQS 124
A+L G +KE L + V + + R SK K G + + G S
Sbjct: 57 ARLFG---------QKESGGKLEVLVERVLDQDRVLAHIRASKAPKPG--MRILVEGGGS 105
Query: 125 RLEATVIDKWNTGEILLVFSISGIE-----LERQISLVGTIPLPPYIARKRPIDARDYVD 179
A ++ + + +F ++ E LER VG +PLPPYI RP DA D
Sbjct: 106 ---AEMLQRHDA-----LFELAFAEPVLPLLER----VGHMPLPPYI--DRPDDAADRER 151
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ G+VAAPTAGLHF LL + + G+ FVTLHVGAGTF PV+VE +DH+
Sbjct: 152 YQTVYAQRAGAVAAPTAGLHFDEALLEAIRAKGVDTAFVTLHVGAGTFQPVRVERIEDHV 211
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH E + A+++ ++RGGR+V+VGTTS+R LE+A DG + P+SG T+IFI P
Sbjct: 212 MHREWLEVGQDVVDAVSACRARGGRVVAVGTTSVRSLESA-ARDGELKPFSGDTDIFIYP 270
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
G F VD L++NFHLP+STLLMLVSAF G ET Y A++ YRF+SYGD
Sbjct: 271 GRPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAVAQGYRFFSYGDA 324
>gi|85711767|ref|ZP_01042823.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase [Idiomarina
baltica OS145]
gi|85694382|gb|EAQ32324.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase [Idiomarina
baltica OS145]
Length = 349
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 135/362 (37%), Positives = 204/362 (56%), Gaps = 24/362 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ V +F FDLP IA P R ++R++ V L+ I +D+ L + D +V
Sbjct: 8 LKVSDFSFDLPDELIARYPQQQRTASRMLRV---LAQQNRIEHGQFTDIVDQLEAGDLLV 64
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + ++ + + + + R ++ K G
Sbjct: 65 FNDTRVIPARLLGEKTSG-----GKVEVLVERMLDDSRVLAHVRANRAPKPGAEFLL--- 116
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLV---GTIPLPPYIARKRPIDARDY 177
+ ++AT++ + + +F + E + L+ G +PLPPYI RP + D
Sbjct: 117 --EGAVKATMLARHDA-----LFELEFNHQETVLELLEAHGHMPLPPYI--DRPDEESDK 167
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT Y + G+VAAPTAGLHF +L +L G++ +VTLHVGAGTF PV+V+ ++
Sbjct: 168 ERYQTVYNREPGAVAAPTAGLHFDDAILQQLKDKGVEFGYVTLHVGAGTFQPVRVDSIEE 227
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIF 296
H+MHSE +D + + VK G R+++VGTTS+R LE+A D +I P+ T+IF
Sbjct: 228 HVMHSEYAKVDTKVCEQIKKVKQAGKRVIAVGTTSVRSLESAAQATDELIAPFFDDTDIF 287
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY F+ +D L++NFHLP+STL+MLVSAF G E YQ AI YRF+SYGD+ L+
Sbjct: 288 IYPGYEFKVIDGLVTNFHLPESTLIMLVSAFAGKELIMNAYQQAIDEKYRFFSYGDSMLI 347
Query: 357 FQ 358
+
Sbjct: 348 LR 349
>gi|322514365|ref|ZP_08067414.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus ureae ATCC 25976]
gi|322119735|gb|EFX91777.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus ureae ATCC 25976]
Length = 361
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 140/365 (38%), Positives = 200/365 (54%), Gaps = 30/365 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +F F+LP A P R ++RL+ ++ +D SDL + D ++
Sbjct: 1 MLVSDFHFNLPDELTARYPTSERTASRLLHLNGETGE---FADKQFSDLLTHIEEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCH------INRREKEISCTLHMRVS--PNSWSVYARPSKVIKKG 112
FNNT+VI A+L G + + R E C H+R S P + + +G
Sbjct: 58 FNNTRVIPARLYGRKASGGKLEVLVERVLDEQRCLAHVRASKAPKEGAELVLGEDKLGEG 117
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
+ F +R EA +N + L +L +Q G IPLPPYI RP
Sbjct: 118 N---GFKAIMATRHEALFELHFNEEQPLF-------DLLQQ---AGHIPLPPYI--DRPD 162
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+ D YQT Y+K+ G+VAAPTAGLHF + L +L + G+ + FVTLHVGAGTF PV+V
Sbjct: 163 EDADQERYQTVYSKVLGAVAAPTAGLHFDTPTLEKLKAKGVNIAFVTLHVGAGTFQPVRV 222
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT----TEDGIINP 288
++ DH MH+E + + + K+ G R+++VGTTS+R +E+A E +I P
Sbjct: 223 DNILDHKMHAEYAEVSQDVVDQILATKAAGKRVIAVGTTSVRSIESAAQAAEQEGKLIAP 282
Query: 289 WSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
+ T+IF+ PG FR VD L++NFHLP+STL+MLVSAF G T Y+HA+ YRF+
Sbjct: 283 FFSDTSIFLYPGKTFRIVDALVTNFHLPESTLIMLVSAFAGYRNTMNAYKHAVEAKYRFF 342
Query: 349 SYGDT 353
SYGD
Sbjct: 343 SYGDA 347
>gi|251793021|ref|YP_003007747.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Aggregatibacter aphrophilus NJ8700]
gi|247534414|gb|ACS97660.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Aggregatibacter aphrophilus NJ8700]
Length = 363
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 142/369 (38%), Positives = 204/369 (55%), Gaps = 29/369 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R ++RL+ ++ I +D+ + D +V
Sbjct: 1 MRVADFNFDLPDELIARYPKPERTASRLLQLNGENG---EIFHRTFADVLDLIQPGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + +S + + + R SK K G L
Sbjct: 58 FNNTRVIPARMFGRKTSG-----GKLEVLVERVLSESRFLAHVRSSKAPKAGAELIL--- 109
Query: 121 DGQSRL-EATVIDKWNTGEILLVFSISGIELERQISL------VGTIPLPPYIARKRPID 173
G+ +L E + G +F I E +Q +L +G +PLPPYI RP +
Sbjct: 110 -GEDKLGEGNGVKAIMLGRQDSLFEIEIAE--KQTALFDVLQQIGHMPLPPYI--DRPDE 164
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT Y K+ G+VAAPTAGLHF LL +L G+ FVTLHVGAGTF PV+VE
Sbjct: 165 EADQERYQTVYNKVPGAVAAPTAGLHFDDELLEKLKEKGVNFAFVTLHVGAGTFQPVRVE 224
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDG----IIN 287
+ +DH+MH+E + A+ + K G R+++VGTTS+R +E+A E+ +I
Sbjct: 225 NIEDHVMHAEYVEVPQSVCDAILATKQAGKRVIAVGTTSVRSIESAALAAEEKQSAVLIE 284
Query: 288 PWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
P+ T+IFI PG FR VD L++NFHLP+STL+MLVSAF G T Y+ A+ + YRF
Sbjct: 285 PYFSDTSIFIYPGKTFRLVDCLITNFHLPESTLIMLVSAFAGFSHTMNAYKSAVENRYRF 344
Query: 348 YSYGDTSLL 356
+SYGD +
Sbjct: 345 FSYGDAMFI 353
>gi|296161046|ref|ZP_06843857.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Burkholderia sp. Ch1-1]
gi|295888745|gb|EFG68552.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Burkholderia sp. Ch1-1]
Length = 352
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 146/381 (38%), Positives = 207/381 (54%), Gaps = 54/381 (14%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVH--PNLSCPLVISDHLVSDLPAFLNSNDA 58
+ + +FDFDLPP IA + R ++RL+ V + P + D ++LP + + D
Sbjct: 2 LTLSDFDFDLPPELIAQVALPERSASRLLEVDNPAGATGPARLIDRRFAELPDCIAAGDL 61
Query: 59 IVFNNTKVITAQLNGVRFCH------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKG 112
+VFN+TKV+ A+ G + + R E + +R S + +P I+
Sbjct: 62 LVFNDTKVLKARFLGQKASGGKIEVLVERLTGERTALAQIRASKSP-----QPGATIRLA 116
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
D F R+E + G+ L + I G +PLPPYI +
Sbjct: 117 DA---FDVTIGERVEPFYTLHF-PGDCLTL-----------IEQFGRLPLPPYI--EHDP 159
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
DA D YQT +A+ G+VAAPTAGLHF LL+RL + G++ +TLHVGAGTF PV+V
Sbjct: 160 DATDETRYQTVFAQNPGAVAAPTAGLHFDEALLARLDARGVERATLTLHVGAGTFQPVRV 219
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSL--------------RLLET 278
E+ +H MHSE + A + + ++RG R+++VGTTS+ R L
Sbjct: 220 ENLAEHKMHSEWYHLPQSLADKIGATRARGNRVIAVGTTSMRALEAAARDAEAAGRPLAA 279
Query: 279 ATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQ 338
A+TE T+IFITPGYRFR VD L++NFHLPKSTLLMLVSAF G+E ++ Y+
Sbjct: 280 ASTE----------TDIFITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIREAYR 329
Query: 339 HAISHAYRFYSYGDTSLLFQK 359
HAI YRF+SYGD LL ++
Sbjct: 330 HAIEARYRFFSYGDAMLLTRR 350
>gi|281357780|ref|ZP_06244266.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Victivallis
vadensis ATCC BAA-548]
gi|281315727|gb|EFA99754.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Victivallis
vadensis ATCC BAA-548]
Length = 354
Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 136/354 (38%), Positives = 196/354 (55%), Gaps = 10/354 (2%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
FD++LP IA P RD +R+MV++ S VI S + +L DA+++N+T+
Sbjct: 7 FDYELPEELIAQHPAARRDGSRMMVLN-RKSGECVIRP--FSAIVDYLEPGDALIYNDTR 63
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSR 125
V+ ++ + + E+ + W+ +P K G DG
Sbjct: 64 VLRGRMYARKNSDPAGAKFELLLVEALDSERRRWNAMLKPGKRALPGVTAGLLDNDGSIN 123
Query: 126 LEA---TVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ VI + G + FS + + +R G IPLPPYI+R + D YQT
Sbjct: 124 SDGDSFCVIGRNGDGTFEIEFSTT--DSDRLQQRYGHIPLPPYISRGD--ENADAERYQT 179
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ +G+VAAPTAGLHFT +L+ L + G+ VTLHVG GTF PV VE+ ++H MHS
Sbjct: 180 VYAQKEGAVAAPTAGLHFTPEILAELKARGVGEAAVTLHVGPGTFKPVSVENAEEHQMHS 239
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E F+ TA+ +NS + G ++++VGTT++R+LE+ T DG ++ G T IF+ P
Sbjct: 240 EEYFLTPETAELVNSTRRTGHKVLAVGTTTVRVLESCVTPDGTVHAGHGKTRIFLYPPKP 299
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
A D+L++NFHLPKSTLLMLVS FC E+ YQ AI RF+SYGD LL
Sbjct: 300 VLAEDMLLTNFHLPKSTLLMLVSCFCDREKVLAAYQVAIRERMRFFSYGDCMLL 353
>gi|221133849|ref|ZP_03560154.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Glaciecola
sp. HTCC2999]
Length = 346
Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 132/361 (36%), Positives = 202/361 (55%), Gaps = 23/361 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F F LP IA P R ++RL+ + I+ H ++ F+ + D ++
Sbjct: 1 MKTSDFGFTLPEHLIAKYPTQQRSASRLLHLDGKTGA---IAHHQFKNMLQFVEAGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + + + SK K G L
Sbjct: 58 FNNTRVIPARLLGQKSTG-----GKIEVLVERMLDDHRVLAHVKSSKSPKPGAQLIL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ +EAT++ + L SG E + + G +PLPPYI RP + D
Sbjct: 110 --EEVIEATMLGRHGA---LFELEFSGNESVLDLLEAHGHMPLPPYI--DRPDEDGDKER 162
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y + G+VAAPTAGLHF +L+++ G+++ FVTLHVGAGTF PVKV++ ++H+
Sbjct: 163 YQTVYNEKPGAVAAPTAGLHFDDEILAQIKDKGVQIEFVTLHVGAGTFQPVKVDNVEEHV 222
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE----DGIINPWSGFTNI 295
MH+E + A+ + K+ G R+++VGTTS+R LE+A + + +I P+ T I
Sbjct: 223 MHAEYAEVPDAVVAAIKATKAAGKRVIAVGTTSMRSLESAAKKADATNELIVPFYEDTEI 282
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PG+ F+ VD + +NFHLP+STL+ML+SA G E + Y AI+H YRF+SYGD+
Sbjct: 283 FIYPGFEFKVVDAMFTNFHLPESTLMMLISALAGKENVMQAYAEAIAHEYRFFSYGDSMF 342
Query: 356 L 356
+
Sbjct: 343 I 343
>gi|86145575|ref|ZP_01063905.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio sp.
MED222]
gi|85836546|gb|EAQ54672.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio sp.
MED222]
Length = 350
Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 142/365 (38%), Positives = 206/365 (56%), Gaps = 23/365 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N ++D D+ + D ++
Sbjct: 1 MQVSDFHFDLPDELIARYPQEERTASRLLKLDGNNGN---LADGSFKDVLDLVEPGDLVI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + S + R SK K G L
Sbjct: 58 FNNTRVIPARVFGRKASG-----GKLEVLVERMLDEKSILAHVRCSKSPKPGTKLFLGEN 112
Query: 121 DGQSRLEATVIDKWNT-GEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
D EA ++ + + EI S +E+ ++ VG +PLPPYI RP + D
Sbjct: 113 D---EYEAEMVARHDALFEIHFTSDQSVLEI---LNSVGHMPLPPYI--DRPDEDADKER 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y + G+VAAPTAGLHF L++ + G++ +VTLHVGAGTF PVKV++ +DH
Sbjct: 165 YQTVYNEKPGAVAAPTAGLHFDDKLMADMKEKGVEFAYVTLHVGAGTFQPVKVDNINDHH 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN-----PWSGFTN 294
MH+E + A+ + K+RGGRI++VGTTS+R LE+A +D + N P+ G T
Sbjct: 225 MHAEYVEVPQEVVDAVAAAKARGGRIIAVGTTSVRSLESA-AQDAVKNGTELVPFFGDTE 283
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PGY ++ VD L++NFHLP+STL+MLVSAF G + Y HA+ YRF+SYGD
Sbjct: 284 IFIFPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYDNVMGAYDHAVKSEYRFFSYGDAM 343
Query: 355 LLFQK 359
+ +K
Sbjct: 344 FINKK 348
>gi|218778769|ref|YP_002430087.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfatibacillum alkenivorans AK-01]
gi|218760153|gb|ACL02619.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfatibacillum alkenivorans AK-01]
Length = 359
Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 142/366 (38%), Positives = 196/366 (53%), Gaps = 36/366 (9%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
+D++LP IA P RD++RL+ + N + +DL L D +V N+TK
Sbjct: 14 YDYELPEELIAQAPAEKRDASRLLKLDKNTGQTAHLQFAQAADL---LQPGDLMVVNDTK 70
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRV------------SPNSWSVYARPSKVIKKGD 113
V +L G +KE + + P + + SK K G
Sbjct: 71 VTPVRLFG---------KKETGGKVEALIIDYRPVAQAGPGEPFACECLVKASKRPKPGS 121
Query: 114 ILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIAR---KR 170
L F L+A V+ + I L+ E + + IPLPPYI R
Sbjct: 122 RLFF-----DKGLKAKVLKAED--RICLLEFTCPTEPGAVLDDIAAIPLPPYIRRGGDAP 174
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
P + R+ YQTTYA+ +G+VAAPTAGLHFT LL + + G++ +TLHVG GTFMPV
Sbjct: 175 PCNDRER--YQTTYARHKGAVAAPTAGLHFTPELLDFIQAKGVEFVRITLHVGYGTFMPV 232
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWS 290
+V+D H MHSE I AQA+N K +G R+V+VGTTS+R LE ++ E+G + S
Sbjct: 233 RVDDVRKHKMHSEFYEISPEAAQAINHAKDQGRRVVAVGTTSVRTLEYSSREEGRVAAGS 292
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G ++FI PG+RF VD L++NFHLP+STLLMLVSA G E YQ A++ YRF+SY
Sbjct: 293 GMCDLFIMPGFRFNIVDALITNFHLPQSTLLMLVSALAGRENILAAYQEAVAEKYRFFSY 352
Query: 351 GDTSLL 356
GD +
Sbjct: 353 GDAMFI 358
>gi|332181217|gb|AEE16905.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase [Treponema
brennaborense DSM 12168]
Length = 345
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 138/359 (38%), Positives = 192/359 (53%), Gaps = 16/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M K+F FDLP IA P R +LMV+ + L+ DLP + N +V
Sbjct: 1 MRTKDFYFDLPEELIAQHPSGIRGQDKLMVLDKATGD---VRHQLMDDLPDLVPQNALMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN++V +++ G++ +E ++P W + +K + G+ F
Sbjct: 58 FNNSRVRRSRVYGIK----ENTGRETEFLFLTPLAPTLWKTMVKNAKKQRPGNRYRF--P 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DG + + + G S + E+ G IPLPPYI RK D Y
Sbjct: 112 DGS--VGVITENPADAGTEFRTLSFTQPIEEQWFERNGHIPLPPYIKRKD--TEEDSERY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
Q YA+ GS A PTAGLHFT +L +L S GI+ FVTLHVG GTF+PV+ E +DH M
Sbjct: 168 QNIYARETGSAACPTAGLHFTERMLEKLDSRGIRRTFVTLHVGLGTFLPVRAERIEDHTM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
H E + TA+ +N+ K G +++VGTTS+R LE+A + +I P T IF+
Sbjct: 228 HEETYSVSRETAELVNTAKKEGRPVLAVGTTSVRTLESAWDPVKSELI-PGINSTRIFMY 286
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGYRF VD + +NFH P+STLLMLVSAF G E Y++A++H YRF+SYGD L+
Sbjct: 287 PGYRFNVVDKMFTNFHTPESTLLMLVSAFAGKEHIMDAYRNAVAHRYRFFSYGDAMLIL 345
>gi|198274129|ref|ZP_03206661.1| hypothetical protein BACPLE_00266 [Bacteroides plebeius DSM 17135]
gi|198273207|gb|EDY97476.1| hypothetical protein BACPLE_00266 [Bacteroides plebeius DSM 17135]
Length = 351
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 133/365 (36%), Positives = 194/365 (53%), Gaps = 20/365 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P RD +RLMV+H + I D+ + + D +
Sbjct: 1 MKLSQFKFKLPEEKIALYPAKYRDESRLMVIHKSTG---EIEHVNFKDILNYFDDKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRRE----KEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
FN+TKV A+L G + R E +E++ L + W V P++ I+ G+ L+
Sbjct: 58 FNDTKVFPARLYGNKEKTGARIEVFLLRELNEELRL------WDVLVDPARKIRIGNKLY 111
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDA 174
F D + A VID + L F G E ++ + +G PLPP+I RP +
Sbjct: 112 FGDDDS---MVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYALGEPPLPPFI--HRPAEP 166
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D +QT YAK +G+V P AGLHF+ L+ R+ GI F+T+H G G F + VED
Sbjct: 167 EDEERFQTIYAKNEGAVTVPAAGLHFSRELMKRMEIKGIDFSFITMHAGLGNFRDIDVED 226
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
H M SE F++A + +N K RG ++ ++GTT +R +ETA DG + + G+TN
Sbjct: 227 LTKHKMDSEQMFVNAEACRIVNEAKDRGNKVCAIGTTVMRAIETAVGTDGHLKEFEGWTN 286
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
FI P Y F + ++SNFH+P ST+LMLV A+ G E Y A+ YRF +YGD
Sbjct: 287 KFIFPPYDFSVANAMVSNFHMPLSTMLMLVCAYGGYELIMDAYNIALKEDYRFGTYGDAM 346
Query: 355 LLFQK 359
L+ K
Sbjct: 347 LILDK 351
>gi|238026275|ref|YP_002910506.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia glumae BGR1]
gi|237875469|gb|ACR27802.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia glumae BGR1]
Length = 350
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 146/361 (40%), Positives = 200/361 (55%), Gaps = 21/361 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDFDLPP IA + R ++RL+ V + P + D ++LP L + D +VFN
Sbjct: 4 LSDFDFDLPPELIAQTALPERSASRLLEVG-GTAGPARLVDRRFTELPDCLAAGDLLVFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKV+ A+ G + I + P + R SK G L
Sbjct: 63 DTKVLKARFFGQKASG-----GRIEVLIERVTGPRTALAQIRASKSPAAGATLTL----- 112
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
E TV ++ L +ER G +PLPPYI + DA D YQT
Sbjct: 113 ADAFEVTVGERVEPFFTLHFPDDCLTLIERH----GRLPLPPYI--EHDPDATDETRYQT 166
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
+A G+VAAPTAGLHF LL+ L + G++ +TLHVGAGTF PV+V++ DH MHS
Sbjct: 167 VFASNPGAVAAPTAGLHFDEALLATLRARGVETATLTLHVGAGTFQPVRVDNIADHRMHS 226
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI----INPWSGFTNIFIT 298
E + + + + ++RGGR+++VGTTS+R LE A + + T+IFIT
Sbjct: 227 EWYELTDALVERIAATRARGGRVIAVGTTSMRALEAAARDAEAAGRPLAATRAETDIFIT 286
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGYRFR VD L++NFHLPKSTLLMLVSAF GIE + Y+HAI+ YRF+SYGD LL +
Sbjct: 287 PGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGIEPIRAAYRHAIAERYRFFSYGDAMLLTR 346
Query: 359 K 359
+
Sbjct: 347 R 347
>gi|256830483|ref|YP_003159211.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Desulfomicrobium baculatum DSM 4028]
gi|256579659|gb|ACU90795.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Desulfomicrobium baculatum DSM 4028]
Length = 361
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 133/363 (36%), Positives = 203/363 (55%), Gaps = 21/363 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +DFDLP ++IA P R ++RL+V+ + D + +D+P L + +V N
Sbjct: 10 LQSYDFDLPEAQIAQDPTAKRGASRLLVLDRKSGT---VRDAMFADIPELLPTGALLVVN 66
Query: 63 NTKVITAQLNG-------VRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
NTKV+ A+L G V F + + T + + SK ++GD+L
Sbjct: 67 NTKVLPARLIGRKESGGKVEFLLLTPLTLIEAKTAADGTKTATAEGLLKASKGPRQGDLL 126
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
F +E V++K G + +G +L G IPLPPYI R+ +
Sbjct: 127 LF------PGIELRVLEKGEFGRARVTLRWTG-DLAEHFLSQGHIPLPPYIHRED--KSE 177
Query: 176 DYVDYQTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT Y++ GSVAAPTAGLHFT +++ L GI++ VTL+VG GTF PV+ +
Sbjct: 178 DRTRYQTVYSREDKLGSVAAPTAGLHFTPEIMASLAQQGIQLAEVTLYVGYGTFSPVRCD 237
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
D +H+MH+E + TA+A+ KS G +++VGTT+ R LE+ + G I P+ G+T
Sbjct: 238 DIREHVMHAEYAEVPEETARAIAKAKSEGRPVIAVGTTTSRTLESMASALGEIGPFKGWT 297
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PGY F+ VD L++NFHLP+S+L+++V G ++ Y HAI +RF+SYGD
Sbjct: 298 DIFIHPGYEFKVVDQLITNFHLPRSSLIIMVCTLAGRQQIIDAYNHAIKQGFRFFSYGDA 357
Query: 354 SLL 356
L+
Sbjct: 358 MLI 360
>gi|325103863|ref|YP_004273517.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Pedobacter
saltans DSM 12145]
gi|324972711|gb|ADY51695.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Pedobacter
saltans DSM 12145]
Length = 349
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 140/363 (38%), Positives = 193/363 (53%), Gaps = 22/363 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP S IA P RD +RLMV+H + I L D+ + + D ++
Sbjct: 1 MKLSQFKFHLPDSLIAHYPAETRDESRLMVLHKDTGE---IEHKLFKDVLGYFDDKDVMI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREK-----EISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
NNTKV A+L G +EK E+ + W V P++ I+ G+ L
Sbjct: 58 LNNTKVFPARLYG-------NKEKTGATIEVFLLRELNKELRLWDVLVDPARKIRVGNKL 110
Query: 116 HFFSQDGQSRLEATVIDKWNTG--EILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
+F D L A V+D + I +F + E + I ++G PLP YI RK P
Sbjct: 111 YFGDDD---LLVAEVVDNTTSRGRTIRFLFDGTDEEFRQNIEILGETPLPKYIKRK-PT- 165
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
A D YQT +AK +G+VAAPTAGLHF+ L+ RL G++ VTLHVG GTF V+VE
Sbjct: 166 AEDKERYQTIFAKNEGAVAAPTAGLHFSRELMKRLELKGVEFAEVTLHVGLGTFRQVEVE 225
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
D H M SE I A +N RI +VGTT +R +E+A + + P + +T
Sbjct: 226 DLTKHKMDSEQFIIAEKDANIVNKAIEEKRRICAVGTTVMRAVESAVSASRTLKPMNDWT 285
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+ FI P Y F + +++NFH P+STLLM+VSAF G E Y+ A+ YRFYSYGD
Sbjct: 286 SKFIFPPYDFSIANSMITNFHTPESTLLMMVSAFGGYEHVMHAYEVAVKEKYRFYSYGDA 345
Query: 354 SLL 356
L+
Sbjct: 346 MLI 348
>gi|330830093|ref|YP_004393045.1| S-adenosylmethionine [Aeromonas veronii B565]
gi|328805229|gb|AEB50428.1| S-adenosylmethionine [Aeromonas veronii B565]
Length = 350
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 138/371 (37%), Positives = 202/371 (54%), Gaps = 35/371 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R ++RL+ + + D+ LN D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPMAERTASRLLQLDGQTGA---LRHGQFVDVLDQLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCH------INRREKEISCTLHMRVSPNSWSVYARP-SKVIKKGD 113
FNNT+VI A++ G + + R E S H+R S +P +++I G
Sbjct: 58 FNNTRVIPARMFGQKASGGKLEILVERILDEHSVLAHVRASKAP-----KPGTRMIMDGG 112
Query: 114 ILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
+ + E +D EIL +G +PLPPYI RP +
Sbjct: 113 VEAEMRARHDALFEIHFLDPRPVLEIL--------------EAIGHMPLPPYI--DRPDE 156
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT Y + G+VAAPTAGLHF LL ++ + G++ FVTLHVGAGTF PV+V+
Sbjct: 157 DADKERYQTVYNQKPGAVAAPTAGLHFDEPLLEKIRAKGVETAFVTLHVGAGTFQPVRVD 216
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT----TEDGIINPW 289
+DH MHSE + A+ + ++RGGR+++VGTTS+R LE+A + + P+
Sbjct: 217 KIEDHHMHSEYAEVPQEVVDAIAATRARGGRVIAVGTTSVRSLESAAKVTLAQGKPLAPF 276
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
T+IFI PGY+F+ VD +++NFHLP+STL+MLVSAF G + YQ A++ YRF+S
Sbjct: 277 FSDTDIFIFPGYQFQIVDAMVTNFHLPESTLIMLVSAFAGYDNVMAAYQAAVAGQYRFFS 336
Query: 350 YGDTSLLFQKR 360
YGD + +++
Sbjct: 337 YGDAMFVTRRQ 347
>gi|91200075|emb|CAJ73118.1| strongly similar to S-adenosylmethionine-tRNA
ribosyltransferase-isomerase [Candidatus Kuenenia
stuttgartiensis]
Length = 367
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 128/357 (35%), Positives = 200/357 (56%), Gaps = 17/357 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++DFDLP IA +P RD+ARL+V++ I S++ +L D +V N
Sbjct: 24 LSDYDFDLPKELIAQKPTEKRDNARLLVLYRRSG---RIEHRRFSEIAGYLRPEDLLVLN 80
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NTKVI +++ G + + + + N W + + ++KKG+ ++
Sbjct: 81 NTKVIPSRIAGKK-----PQGAYVDLLFIEELEDNHWKALLKSNGLLKKGEKIYL----D 131
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD--- 179
+ + A ++ K +L +G + I G +PLPPYI R + + +D
Sbjct: 132 NAAVSACLLVKHEDNSWILRIE-NGANIRELIHRTGEMPLPPYIKRPKKNNTLSTLDAER 190
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A+ +G++AAPTAGLHF+ ++L ++ + G + FVTLHV GTF+P+K E+ +H
Sbjct: 191 YQTVFAQKEGAIAAPTAGLHFSEDVLGKIRNSGTDIAFVTLHVRLGTFLPIKTEEIKNHR 250
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH E + K+RGGRI++ G+TS R LET + I+ +SG+T++FI P
Sbjct: 251 MHKEYYEYTKELLPKITITKNRGGRIIATGSTSCRTLETIALNNN-IHQFSGYTDLFIYP 309
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+ VD L++NFHLPK+TL +LVSAF G E+ Y+ A YRFYSYGD L+
Sbjct: 310 PYPFQYVDALITNFHLPKTTLFLLVSAFAGREQIFNAYEIAKKEGYRFYSYGDCMLI 366
>gi|115350667|ref|YP_772506.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia ambifaria AMMD]
gi|122323978|sp|Q0BI51|QUEA_BURCM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|115280655|gb|ABI86172.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Burkholderia ambifaria AMMD]
Length = 355
Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 144/361 (39%), Positives = 200/361 (55%), Gaps = 21/361 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LPP IA + R ++RL+ V + P + D +LP+ + D +VFN
Sbjct: 4 LSDFDFNLPPELIAQTALPERTASRLLEVDHTVE-PARLVDRNFVELPSCIAPGDLLVFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+V+ A RF +I + ++ R SK G L
Sbjct: 63 DTRVLKA-----RFFGQKASGGKIEVLIERVTGTHTALAQIRASKSPGTGTTLRL----- 112
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ TV ++ L F + L I G +PLPPYI + DA D YQT
Sbjct: 113 ADAFDVTVGERVEPF-FTLHFPQPCLTL---IEQHGRLPLPPYI--EHDADANDETRYQT 166
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA G+VAAPTAGLHF LL +L ++G++ +TLHVGAGTF PV+VE+ +H MHS
Sbjct: 167 VYASNPGAVAAPTAGLHFDLPLLEQLDAMGVERATLTLHVGAGTFQPVRVENIAEHRMHS 226
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGF---TNIFIT 298
E + + + ++RGG +++VGTTS+R LE A + D P + T+IFIT
Sbjct: 227 EWYDLPQSLVDKIAATRARGGNVIAVGTTSMRALEAAARSADEAGRPLAATQAETDIFIT 286
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGYRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI YRF+SYGD LL +
Sbjct: 287 PGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIRAAYRHAIDERYRFFSYGDAMLLTR 346
Query: 359 K 359
+
Sbjct: 347 R 347
>gi|255693344|ref|ZP_05417019.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
finegoldii DSM 17565]
gi|260620920|gb|EEX43791.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
finegoldii DSM 17565]
Length = 352
Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 131/365 (35%), Positives = 195/365 (53%), Gaps = 19/365 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P RD +RLMV+H N I + ++ + + D +
Sbjct: 1 MKLSQFKFKLPEDKIALHPTKYRDESRLMVLHRNTGK---IEHKMFKEVLEYFDDKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRRE----KEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
FN+TKV A+L G + R E +E++ L + W V P++ I+ G+ L+
Sbjct: 58 FNDTKVFPARLYGNKEKTGARIEVFLLRELNEELRL------WDVLVDPARKIRIGNKLY 111
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDA 174
F D + A VID + L F G E ++ + +G PLP I RP++
Sbjct: 112 FGPDDS---MVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYELGETPLPHTII-NRPVEP 167
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D +Q+ +AK +G+V APTA LHF+ L+ RL G+ ++TLH G G F + VED
Sbjct: 168 EDAERFQSIFAKKEGAVTAPTASLHFSRELMKRLEIKGVDFAYITLHAGLGNFRDIDVED 227
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
H M SE F+D + +N K G + +VGTT +R +E+A + DG + + G+TN
Sbjct: 228 LTKHKMDSEQMFVDEAAVKTVNRAKDNGKNVCAVGTTVIRAIESAVSTDGHLKEFEGWTN 287
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
FI P Y F + ++SNFH+P STLLM+V+AF G E+ Y A+ YRF +YGD
Sbjct: 288 KFIFPPYEFTVANSMISNFHMPLSTLLMIVAAFGGYEQVMDAYHVALKEGYRFGTYGDAM 347
Query: 355 LLFQK 359
L+ K
Sbjct: 348 LILDK 352
>gi|149371547|ref|ZP_01890963.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queuosine
biosynthesis protein) [unidentified eubacterium SCB49]
gi|149355174|gb|EDM43734.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queuosine
biosynthesis protein) [unidentified eubacterium SCB49]
Length = 349
Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 142/363 (39%), Positives = 194/363 (53%), Gaps = 22/363 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F F+LP +A P RD +RLMV++ I DL + +D +
Sbjct: 1 MKLSNFGFELPDELLAEYPSENRDESRLMVLNRK---EQTIEHKKFKDLIDYFEEDDILC 57
Query: 61 FNNTKVITAQLNGVRFCHINRREK-----EISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
NNTKV A+L G +EK E+ + W V P++ I+ G+ L
Sbjct: 58 LNNTKVFPARLFG-------NKEKTGARIEVFLLRELNSETRLWDVLVDPARKIRIGNKL 110
Query: 116 HFFSQDGQSRLEATVIDKWNT-GEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPID 173
+F + L A VID + G L +F S E ++ +G PLP YI KR ++
Sbjct: 111 YFGDDET---LVAEVIDNTTSRGRTLRFLFDGSYEEFRNKLKELGETPLPKYI--KRDVE 165
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT YAK +G+VAAPTAGLHF+ +LL R G+ V VTLHVG GTF V+VE
Sbjct: 166 EDDAERYQTIYAKEEGAVAAPTAGLHFSKHLLKRFEIKGVNVAEVTLHVGLGTFSAVEVE 225
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
D H M SE I T +N RI +VGTT +R LE++ + + +N +SG+T
Sbjct: 226 DLSKHKMDSEEMHIGKETVDLINQGLIDKRRICAVGTTVMRSLESSVSSNHTLNEFSGWT 285
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
N FI P Y F + +++NFH PKSTLLM+VSAF G + T++ Y+ AI Y FYSYGD
Sbjct: 286 NKFIFPPYDFSIANCMITNFHTPKSTLLMMVSAFAGHDFTQRAYEEAIKEKYNFYSYGDA 345
Query: 354 SLL 356
L+
Sbjct: 346 MLI 348
>gi|317056882|ref|YP_004105349.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Ruminococcus albus 7]
gi|315449151|gb|ADU22715.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Ruminococcus albus 7]
Length = 355
Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 134/357 (37%), Positives = 192/357 (53%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F ++LP IA PV PR+++R++ + + V DH +L L D +V
Sbjct: 7 MKRSDFFYELPQELIAQTPVEPRNASRMLCL--DRFTGEVGHDHFY-NLCDHLKKGDLLV 63
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+++V+ A++ G I L + + W + RP K + G F
Sbjct: 64 LNDSRVLPARIYG----ETEDTHSFIEFLLVEQRANMEWEILCRPGKKARVGRRFVF--- 116
Query: 121 DGQSRLEATVIDKWNTGEILLVFSIS-GIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G L A + + G + F L + +G +PLPPYI K +D
Sbjct: 117 -GDGLLRAEITEVLEDGNRIARFECDDSTNLFAALDEIGQMPLPPYITEK----LKDKER 171
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y+ GS AAPTAGLHFT L+ + ++G+ + +VTLHVG GTF PVK + DH
Sbjct: 172 YQTVYSNEIGSSAAPTAGLHFTKEQLADIEAMGVNIAYVTLHVGLGTFRPVKEDKVLDHK 231
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH E + TA +N K+ GGR+++VGTTS R LE+ G I P GFT IFI P
Sbjct: 232 MHREHYELPKRTADLINKTKAEGGRVIAVGTTSCRTLESVAALYGDIRPCDGFTEIFIYP 291
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
G+ F+ +D L++NFHLP+STL+MLVSAF G E T Y+ A+ YRF+S+GD+ +
Sbjct: 292 GFEFKVLDGLITNFHLPESTLIMLVSAFAGYENTMNAYKIAVEEKYRFFSFGDSMFI 348
>gi|15602097|ref|NP_245169.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pasteurella
multocida subsp. multocida str. Pm70]
gi|13431796|sp|P57832|QUEA_PASMU RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|12720458|gb|AAK02316.1| QueA [Pasteurella multocida subsp. multocida str. Pm70]
Length = 363
Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 140/368 (38%), Positives = 205/368 (55%), Gaps = 27/368 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ ++ I+ +D+ ++ D ++
Sbjct: 1 MRVSDFYFDLPDELIARYPKPDRTASRLLQLNGENG---EITHRTFADILDQIHEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + +S + + R SK K+G L + +
Sbjct: 58 FNNTRVIPARMFGRKASG-----GKVEVLVERILSDTRFLAHVRSSKAPKEGAEL-WLGE 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISL------VGTIPLPPYIARKRPIDA 174
D + + L I+ ++Q +L +G +PLPPYI RP +
Sbjct: 112 DKLGEHHGVKMIMVARHDTLFELEIA----QKQTALLDVLQQIGHMPLPPYI--DRPDEE 165
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D YQT Y K+ G+VAAPTAGLHF LL++L + G+ FVTLHVGAGTF PV+VE
Sbjct: 166 ADKERYQTVYNKVPGAVAAPTAGLHFDDALLAQLKAKGVNFAFVTLHVGAGTFQPVRVEQ 225
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET---ATTEDG---IINP 288
+DH MH+E + A+ + K G R+++VGTTS+R +E+ AT E G +I P
Sbjct: 226 IEDHKMHAEYVEVPQEVCDAIIATKQAGKRVIAVGTTSVRSVESAALATEEKGEHALITP 285
Query: 289 WSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
+ T+IFI PG FR VD L++NFHLP+STL+MLVSAF G T + YQ A+ + YRF+
Sbjct: 286 YFSDTSIFIYPGKTFRVVDCLITNFHLPESTLIMLVSAFAGYRHTMQAYQSAVENRYRFF 345
Query: 349 SYGDTSLL 356
SYGD +
Sbjct: 346 SYGDAMFI 353
>gi|237740338|ref|ZP_04570819.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. 2_1_31]
gi|229422355|gb|EEO37402.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. 2_1_31]
Length = 351
Score = 226 bits (577), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 140/358 (39%), Positives = 207/358 (57%), Gaps = 26/358 (7%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
++D+ LP I +P PRDSA+LM++ N + H ++ +L D +V N T
Sbjct: 15 DYDYFLPEELIGQKPREPRDSAKLMLI--NRKTGEIEHKHFY-NIIDYLQKGDVLVRNAT 71
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHM----RVSPNSWSVYARPSKVIKKGDILHFFSQ 120
KVI A++ G KE L + R+S ++W +P+K +K G L+
Sbjct: 72 KVIPARIYG---------HKESGGVLEVLLIKRISIDTWECLLKPAKKLKLGQKLYI--- 119
Query: 121 DGQSR-LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G+++ L A +++ G +L F G E + +G++PLPPYI RK ++ +D
Sbjct: 120 -GENKELIAELLEIKEDGNRILKFYYEG-SFEEVLDKLGSMPLPPYITRK--LENKD--R 173
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ SVAAPTAGLHFT LL ++ GI++ + L VG GTF PV+ E+ +H
Sbjct: 174 YQTVYAQRGESVAAPTAGLHFTEELLKKISEKGIEIIDIFLEVGLGTFRPVQTENVLEHK 233
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH E I A+A+N K++G RI+SVGTT+ R LE++ E+G + T IFI P
Sbjct: 234 MHEESFEISEKAAKAINEAKAQGRRIISVGTTATRALESSVDENGKLIAQKKDTEIFIYP 293
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GYRF+ VD L++NFHLPKSTLLMLVSA E+ ++Y A+ Y F+S+GD+ ++
Sbjct: 294 GYRFKIVDALITNFHLPKSTLLMLVSALYDREKMLEIYNLAVKEEYHFFSFGDSMFIY 351
>gi|300871265|ref|YP_003786138.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brachyspira
pilosicoli 95/1000]
gi|300688966|gb|ADK31637.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brachyspira
pilosicoli 95/1000]
Length = 358
Score = 226 bits (577), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 142/363 (39%), Positives = 201/363 (55%), Gaps = 25/363 (6%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
++F LP + IA P + RD +LM ++ N + + SD+ +LN ND +V N++K
Sbjct: 10 YNFYLPENLIATTPNYERDHCKLMTINKNTG---EVEHKIFSDIINYLNKNDILVLNDSK 66
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF-FSQ-DGQ 123
VI A++ + N EI S + W + K IK+ DIL+ +S +
Sbjct: 67 VIPARIYAKKNTGGNA---EILLLNKFNNSEDLWECLIK-GKNIKENDILYLDYSHIENI 122
Query: 124 SRLEATVIDKWNTGEILLVFS---ISGIELERQISLVGTIPLPPYIARKR------PIDA 174
+EA++I K N L+ FS S I + +G IPLPPYI + R +
Sbjct: 123 GIIEASII-KDNISTKLIKFSKPLTSNI-----LDTIGKIPLPPYIIQSRKKKGEEEYND 176
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
+D YQ YAK +GS+A+PT+GLHFT LL ++ S+GI + +VTLHVG TF P+K ED
Sbjct: 177 KDKEFYQNVYAKNEGSIASPTSGLHFTKELLEKIKSLGITICYVTLHVGFSTFNPIKEED 236
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
H+MH E I TA + + K G RIVS GTT R+LE+ D N G TN
Sbjct: 237 LKKHVMHEEKFSIPKETASIIINAKKDGRRIVSCGTTVARVLESEYN-DFNFNRLEGSTN 295
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI P Y+F+ VD L++NFH P STLL +VSAF G + Y+ A+ + Y F+SYGD +
Sbjct: 296 IFIYPPYKFKCVDALITNFHTPHSTLLAMVSAFAGYDNIMNAYKIAVENNYHFFSYGDAT 355
Query: 355 LLF 357
L+
Sbjct: 356 FLY 358
>gi|327392946|dbj|BAK10368.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Pantoea ananatis AJ13355]
Length = 356
Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 143/363 (39%), Positives = 208/363 (57%), Gaps = 27/363 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLV-SDLPAFLNSNDAI 59
M V +F F+LP S IA P R RL+ +L P H V +D+ L D +
Sbjct: 1 MRVADFAFELPESLIAHYPQAQRSGCRLL----SLDGPSGALAHGVFTDVLDKLQPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A++ G + +I + + + R SK K G L
Sbjct: 57 VFNNTRVIPARVFGRKASG-----GKIEMLVERMLDDKRVLAHVRASKAPKPGAEL--LL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARKRPIDAR 175
D +S ++AT++ + + +F I+ E +R + + VG +PLPPYI RP +
Sbjct: 110 GDDES-VKATMVARHDA-----LFEIA-FEDDRAVLDILNSVGHMPLPPYI--DRPDEEA 160
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y+ G+VAAPTAGLHF L+ L G+++ FVTLHVGAGTF PV+VE
Sbjct: 161 DRELYQTVYSARPGAVAAPTAGLHFDEPLIQALKDKGVEMAFVTLHVGAGTFQPVRVETI 220
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFT 293
++H MH+E + A+ + K+RG ++V+VGTTS+R LE+A ++D +I P+ T
Sbjct: 221 EEHHMHAEYAEVPQEVVDAVLACKARGNKVVAVGTTSVRSLESAAKASQDALIAPFFDDT 280
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFI PGY ++ +D L++NFHLP+STL+MLVSAF G + T Y+ A++ YRF+SYGD
Sbjct: 281 QIFIYPGYEYQVIDALITNFHLPESTLIMLVSAFAGYQHTMAAYRAAVAEEYRFFSYGDA 340
Query: 354 SLL 356
+
Sbjct: 341 MFI 343
>gi|153004186|ref|YP_001378511.1| queuosine biosynthesis protein [Anaeromyxobacter sp. Fw109-5]
gi|166216697|sp|A7H9Y1|QUEA_ANADF RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|152027759|gb|ABS25527.1| Queuosine biosynthesis protein [Anaeromyxobacter sp. Fw109-5]
Length = 345
Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 146/357 (40%), Positives = 207/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLV-SDLPAFLNSNDAI 59
M + +FD++LP +A PV PRD++RL+V+ P ++H +DLP L D +
Sbjct: 1 MRLSDFDYELPEELVAQEPVTPRDASRLLVL-PREGA----AEHRAFTDLPDLLAPGDLL 55
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFN+TKVI A+L G + + + + C + W + SK I++G L F
Sbjct: 56 VFNDTKVIPARLVGTK--PTGGKVELLLCEPLGGGLGSRWRAMGQASKPIREGTTLLFEG 113
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
LEA V G ++ G LE ++ G IPLPPYI R+ P D D
Sbjct: 114 ------LEARVEASEGEGFYVVTLDREGEALEAALARAGRIPLPPYI-RRAPSDV-DRER 165
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A+ GS AAPTAGLHFT +L+RL + G++ VTLHVG GTF+PV+ + + H
Sbjct: 166 YQTIWARAPGSAAAPTAGLHFTEAILARLAARGVERTAVTLHVGPGTFLPVRGDSVEGHR 225
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH+E + A A+ + ++RG R+V+VGTTS+R LE+A + +G T +F+ P
Sbjct: 226 MHAEQYEVRPEAAAAIAACRARGSRVVAVGTTSVRTLESAWRGGAVAA-GAGRTALFVRP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
G+ FRAVD L++NFHLP+STLLMLV AF G Y+ A++ YRF+SYGD LL
Sbjct: 285 GHAFRAVDALVTNFHLPRSTLLMLVCAFGGTHRVLAAYRDAVARRYRFFSYGDAMLL 341
>gi|212212409|ref|YP_002303345.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Coxiella
burnetii CbuG_Q212]
gi|226713836|sp|B6IZS2|QUEA_COXB2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|212010819|gb|ACJ18200.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Coxiella
burnetii CbuG_Q212]
Length = 343
Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 136/352 (38%), Positives = 198/352 (56%), Gaps = 18/352 (5%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+FD++LP IA RP+ R +RL+ + + +S + + ND +V N+T
Sbjct: 9 DFDYNLPVELIAQRPLADRSGSRLLYIDRSRR---TVSHRQFNGFVEQVKPNDLVVLNDT 65
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQS 124
KVI A L G + + ++ C + +S + + + R SK K G + + + +
Sbjct: 66 KVIPAGLFGHK-----QTGGKVECLVERILSKDRFLAHIRASKAPKLGSQI-IIADNFKI 119
Query: 125 RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTY 184
+E D + E +L S S ++L Q G IPLPPYI +R D D YQT +
Sbjct: 120 IIEGRYNDLF---ECVLHSSASILDLLYQ---HGRIPLPPYI--QREPDKDDQARYQTIF 171
Query: 185 AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEI 244
A+ G+VAAPTAGLHF L G + +VTLHVGAGTF PV+ + DH MH E
Sbjct: 172 AERAGAVAAPTAGLHFNEETFDALRKKGAAITYVTLHVGAGTFQPVRADSLADHRMHHEW 231
Query: 245 GFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFR 304
+ A+ + GR+++VGTT +R LETA T++G P++G T++FI PG++F+
Sbjct: 232 MEVSKAVCDAIAKCRKNNGRVIAVGTTVMRCLETA-TKNGECRPYAGETDLFIYPGFQFK 290
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
VD L++NFHLPKSTLLMLV AF G E + YQ A+ + YRF+SYGD L+
Sbjct: 291 CVDALLTNFHLPKSTLLMLVCAFGGYELVMEAYQKAVENRYRFFSYGDAMLI 342
>gi|29654504|ref|NP_820196.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Coxiella
burnetii RSA 493]
gi|153208623|ref|ZP_01946880.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Coxiella
burnetii 'MSU Goat Q177']
gi|154705886|ref|YP_001424643.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Coxiella
burnetii Dugway 5J108-111]
gi|165919024|ref|ZP_02219110.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Coxiella
burnetii RSA 334]
gi|212218626|ref|YP_002305413.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Coxiella
burnetii CbuK_Q154]
gi|46577001|sp|Q83CC6|QUEA_COXBU RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|189038517|sp|A9KFQ4|QUEA_COXBN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|226713835|sp|B6J7L9|QUEA_COXB1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|29541771|gb|AAO90710.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Coxiella
burnetii RSA 493]
gi|120575884|gb|EAX32508.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Coxiella
burnetii 'MSU Goat Q177']
gi|154355172|gb|ABS76634.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Coxiella
burnetii Dugway 5J108-111]
gi|165917279|gb|EDR35883.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Coxiella
burnetii RSA 334]
gi|212012888|gb|ACJ20268.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Coxiella
burnetii CbuK_Q154]
Length = 343
Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 136/352 (38%), Positives = 198/352 (56%), Gaps = 18/352 (5%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+FD++LP IA RP+ R +RL+ + + +S + + ND +V N+T
Sbjct: 9 DFDYNLPVELIAQRPLADRSGSRLLYIDRSRR---TVSHRQFNGFVEQVKPNDLVVLNDT 65
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQS 124
KVI A+L G + + ++ C + +S + + + R SK K G + + + +
Sbjct: 66 KVIPARLFGHK-----QTGGKVECLVERILSKDRFLAHIRASKAPKLGSQI-IIADNFKI 119
Query: 125 RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTY 184
+E D + E +L S S ++L Q G IPLPPYI +R D D YQT +
Sbjct: 120 IIEGRYNDLF---ECVLHSSASILDLLYQ---HGRIPLPPYI--QREPDKDDQARYQTIF 171
Query: 185 AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEI 244
A+ G+VAAPTAGLHF L G + +VTLHVGAGTF PV+ + DH MH E
Sbjct: 172 AERAGAVAAPTAGLHFNEETFDALRKKGAAITYVTLHVGAGTFQPVRADSLADHRMHHEW 231
Query: 245 GFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFR 304
+ A+ + GR+++VGTT +R LETA T++G P++G T++FI PG++F
Sbjct: 232 MEVSKAVCDAIAKCRKNNGRVIAVGTTVMRCLETA-TKNGECRPYAGETDLFIYPGFQFN 290
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
VD L++NFHLPKSTLLMLV AF G E + YQ A+ + YRF+SYGD L+
Sbjct: 291 CVDALLTNFHLPKSTLLMLVCAFGGYELVMEAYQKAVENRYRFFSYGDAMLI 342
>gi|291616515|ref|YP_003519257.1| QueA [Pantoea ananatis LMG 20103]
gi|291151545|gb|ADD76129.1| QueA [Pantoea ananatis LMG 20103]
Length = 367
Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 143/363 (39%), Positives = 208/363 (57%), Gaps = 27/363 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLV-SDLPAFLNSNDAI 59
M V +F F+LP S IA P R RL+ +L P H V +D+ L D +
Sbjct: 12 MRVADFAFELPESLIAHYPQAQRSGCRLL----SLDGPSGALAHGVFTDVLDKLQPGDLL 67
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A++ G + +I + + + R SK K G L
Sbjct: 68 VFNNTRVIPARVFGRKASG-----GKIEMLVERMLDDKRVLAHVRASKAPKPGAEL--LL 120
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARKRPIDAR 175
D +S ++AT++ + + +F I+ E +R + + VG +PLPPYI RP +
Sbjct: 121 GDDES-VKATMVARHDA-----LFEIA-FEDDRAVLDILNSVGHMPLPPYI--DRPDEEA 171
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y+ G+VAAPTAGLHF L+ L G+++ FVTLHVGAGTF PV+VE
Sbjct: 172 DRELYQTVYSARPGAVAAPTAGLHFDEPLIQALKDKGVEMAFVTLHVGAGTFQPVRVETI 231
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFT 293
++H MH+E + A+ + K+RG ++V+VGTTS+R LE+A ++D +I P+ T
Sbjct: 232 EEHHMHAEYAEVPQEVVDAVLACKARGNKVVAVGTTSVRSLESAAKASQDALIAPFFDDT 291
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFI PGY ++ +D L++NFHLP+STL+MLVSAF G + T Y+ A++ YRF+SYGD
Sbjct: 292 QIFIYPGYEYQVIDALITNFHLPESTLIMLVSAFAGYQHTMAAYRAAVAEEYRFFSYGDA 351
Query: 354 SLL 356
+
Sbjct: 352 MFI 354
>gi|15806585|ref|NP_295300.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Deinococcus
radiodurans R1]
gi|21263929|sp|Q9RU19|QUEA_DEIRA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|6459340|gb|AAF11138.1|AE002001_4 s-adenosylmethionine:tRNA ribosyltransferase-isomerase [Deinococcus
radiodurans R1]
Length = 362
Score = 226 bits (576), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 141/352 (40%), Positives = 195/352 (55%), Gaps = 18/352 (5%)
Query: 8 FDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVI 67
FDLP RIA PRD++RLMVV I + DLP L +D +VFN ++VI
Sbjct: 20 FDLPEDRIAQTGAEPRDTSRLMVVGEQ------IKHRMFRDLPDLLRPSDLLVFNESRVI 73
Query: 68 TAQLNGVRFCHINRREKEISCTL---HMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQS 124
A++ + ++ L V N WS Y +P+K + G L + ++ +
Sbjct: 74 PARVLARKPVVNGFGGGQVEVLLLREEFDVGANVWSAYLKPAK--RAGHEL-WLGENEAT 130
Query: 125 RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTY 184
A V+ + G LL F +++ + +G +PLPPYI D YQT Y
Sbjct: 131 GHRAEVVGVLDDGARLLRFDH---DIKPHLDEIGRLPLPPYI-NAGDSDETWRERYQTVY 186
Query: 185 AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEI 244
AK GSVAAPTAGLHFT LL+RL +G++ VTLHVGAGTF P++ DH+MH+E
Sbjct: 187 AKTPGSVAAPTAGLHFTPELLARLDEMGVERASVTLHVGAGTFKPIQ-GPVADHVMHAER 245
Query: 245 GFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFR 304
+ A A+ K+ G R+V+VGTT++R LE+A + + +G T IFITPG R
Sbjct: 246 YEVSETNAAAITRAKAEGRRVVAVGTTTVRTLESAW-DGAAVRAGAGETRIFITPGTRVE 304
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
D+L++N HLP STLL+LV+AF G + + Y A+S YRFYS GD LL
Sbjct: 305 VPDLLITNLHLPGSTLLLLVAAFAGEDRIRAAYDAALSQDYRFYSLGDAMLL 356
>gi|227113369|ref|ZP_03827025.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pectobacterium carotovorum subsp. brasiliensis PBR1692]
Length = 355
Score = 226 bits (576), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 144/362 (39%), Positives = 207/362 (57%), Gaps = 25/362 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLV-SDLPAFLNSNDAI 59
M V +F F+LP S IA P R RL+ +L P H V +DL LN D +
Sbjct: 1 MRVTDFSFELPESLIAHYPQAERSGCRLL----SLDGPTGNLTHGVFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + ++ + + + + R SK K G L
Sbjct: 57 VFNNTRVIPARLFGRKAS-----GGKLEVLVERVLDDHRVLAHVRASKAPKPGTEL--LL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISL---VGTIPLPPYIARKRPIDARD 176
D +S ++AT+ + + +F + + +S+ +G +PLPPYI RP + D
Sbjct: 110 GDDES-VKATMTARHDA-----LFELHFDDARDVLSILNDIGHMPLPPYI--DRPDEDAD 161
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT Y++ G+VAAPTAGLHF +L+ L GI + FVTLHVGAGTF PV+V+ +
Sbjct: 162 RELYQTVYSQRPGAVAAPTAGLHFDEPMLAALREKGIDMAFVTLHVGAGTFQPVRVDTIE 221
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE--TATTEDGIINPWSGFTN 294
DHIMH+E + A+ + K+RG R+++VGTTS+R LE +++ I P+ G T
Sbjct: 222 DHIMHAEYAEVPQDVVDAVLACKARGNRVIAVGTTSVRSLESAAQASQNAAIEPFFGDTK 281
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PGY +R +D L++NFHLP+STL+MLVSAF G + T Y+ A++ YRF+SYGD
Sbjct: 282 IFIYPGYHYRIIDALVTNFHLPESTLIMLVSAFAGYQNTMSAYRQAVAEQYRFFSYGDAM 341
Query: 355 LL 356
+
Sbjct: 342 FI 343
>gi|162449922|ref|YP_001612289.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Sorangium
cellulosum 'So ce 56']
gi|189038881|sp|A9FI02|QUEA_SORC5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|161160504|emb|CAN91809.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Sorangium
cellulosum 'So ce 56']
Length = 374
Score = 226 bits (575), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 144/374 (38%), Positives = 206/374 (55%), Gaps = 24/374 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + D++LP + IA RP RD ARL++V V + DL ++ ++
Sbjct: 1 MRCELLDYELPEALIASRPPEERDGARLLLVDRGRRAGEV-EHAAIRDLDRYIERGALVI 59
Query: 61 FNNTKVITAQLNG--------VRFCHINRREKEISCTLHMRVSPNS-------WSVYARP 105
N+TKV+ A+L G V ++R + + + P W R
Sbjct: 60 VNDTKVVPARLFGRKRGTGGQVELFLLHRLDGAPAGAEDLGGGPQESAPRSERWRAMGRA 119
Query: 106 SKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSI-SGIELERQISLVGTIPLPP 164
SK I+ G +L +DG L A V+++ G + + S +G+ + I G +PLPP
Sbjct: 120 SKPIRPGSVLDI-ERDGA--LVAEVLERAEDGVLTVQLSSPAGLSVAAAIDAYGHVPLPP 176
Query: 165 YIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
Y+ R DA D YQT +A++ G+VAAPTAGLH + L+ RL + G+++ VTLHVG
Sbjct: 177 YLGRGD--DASDRERYQTIFARVPGAVAAPTAGLHLSPGLVERLRANGVEIASVTLHVGL 234
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TE 282
GTF PV V+D D H MH+E+ I TA A+ ++RG ++++GTT +R LE+A
Sbjct: 235 GTFQPVTVDDLDLHPMHAEVYSIPDATAGAIAGARARGAPVIAIGTTVVRALESAADPAR 294
Query: 283 DGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAIS 342
G++ SG T + I PGYRFR VD L++NFHLP+STLL LV AF G E T Y+ AI
Sbjct: 295 AGLVQAQSGETRLLIQPGYRFRVVDALLTNFHLPRSTLLALVFAFAGRERTLLAYRAAID 354
Query: 343 HAYRFYSYGDTSLL 356
YRFYSYGD L+
Sbjct: 355 AGYRFYSYGDAMLI 368
>gi|153807129|ref|ZP_01959797.1| hypothetical protein BACCAC_01406 [Bacteroides caccae ATCC 43185]
gi|149130249|gb|EDM21459.1| hypothetical protein BACCAC_01406 [Bacteroides caccae ATCC 43185]
Length = 352
Score = 226 bits (575), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 132/365 (36%), Positives = 194/365 (53%), Gaps = 19/365 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P RD +RLMV+H N I + D+ + + D +
Sbjct: 1 MKLSQFKFKLPEDKIALHPTKYRDESRLMVLHRNTGK---IEHRMFKDVLDYFDDKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRRE----KEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
FN+TKV A+L G + R E +E++ L + W V P++ I+ G+ L+
Sbjct: 58 FNDTKVFPARLYGNKEKTGARIEVFLLRELNEELRL------WDVLVDPARKIRIGNKLY 111
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDA 174
F D + A VID + L F G E ++ + +G PLP I RP++
Sbjct: 112 FGPDDS---MVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYALGETPLPHSII-NRPVEP 167
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D +Q+ +AK +G+V APTA LHF+ L+ RL GI ++TLH G G F + VED
Sbjct: 168 EDAERFQSIFAKKEGAVTAPTASLHFSRELMKRLEIKGIDFAYITLHAGLGNFRDIDVED 227
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
H M SE +D + +N K G + +VGTT +R +E+A + DG + + G+TN
Sbjct: 228 LTKHKMDSEQMLVDEAAVKTVNRAKDTGRNVCAVGTTVMRAIESAVSTDGHLKEFEGWTN 287
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
FI P Y F + ++SNFH+P STLLM+V+AF G E+ Y A+ YRF +YGD
Sbjct: 288 KFIFPPYEFTVANSMISNFHMPLSTLLMIVAAFGGYEQVMDAYHVALKEGYRFGTYGDAM 347
Query: 355 LLFQK 359
L+ K
Sbjct: 348 LILDK 352
>gi|320186034|gb|EFW60779.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
flexneri CDC 796-83]
Length = 356
Score = 226 bits (575), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 143/359 (39%), Positives = 204/359 (56%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R S RL+ +L P H +DL LN D +
Sbjct: 1 MRVTDFFFELPESLIAHYPMPERSSCRLL----SLDGPTGALTHGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT VI A+L G + +I + + + R SK K G
Sbjct: 57 VFNNTSVIPARLFGRKASG-----GKIEVLVERMLDDKRILAHIRASKAPKPG--AELLL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
D +S + AT+ + G + V + ++ +G +PLPPYI RP + D
Sbjct: 110 GDDES-INATMTARH--GALFEVEFNDDRSVLDILNSIGHMPLPPYI--DRPDEDADREL 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHI
Sbjct: 165 YQTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHI 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFI 297
MHSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 225 MHSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFI 284
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
G++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 285 YLGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFI 343
>gi|52425613|ref|YP_088750.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Mannheimia
succiniciproducens MBEL55E]
gi|81609463|sp|Q65S95|QUEA_MANSM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|52307665|gb|AAU38165.1| QueA protein [Mannheimia succiniciproducens MBEL55E]
Length = 363
Score = 226 bits (575), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 138/364 (37%), Positives = 201/364 (55%), Gaps = 19/364 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F FDLP IA +P+ + IS H SD+ +N D ++
Sbjct: 1 MHLSDFYFDLPDELIAR---YPKPERSSSRLLRLSGENGDISHHTFSDVYDLINEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + ++ + + + R SK K G L +
Sbjct: 58 FNNTRVIPARMYGRKASG-----GKIEVLIERVLTESRFLAHVRSSKAPKAGTEL-ILGE 111
Query: 121 D--GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
D G+ + V+ L + L + +G +PLPPYI RP + D
Sbjct: 112 DKLGEGKGVKAVMIGRQDALFELEITEKSTALLDILQKIGHMPLPPYI--DRPDEDADQE 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y+KI G+VAAPTAGLHF LL++L + G+ FVTLHVGAGTF PV+V + ++H
Sbjct: 170 RYQTVYSKIPGAVAAPTAGLHFDEELLAKLKAKGVNFAFVTLHVGAGTFQPVRVNNIEEH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET---ATTEDG---IINPWSGF 292
MH+E + A+ + K+ G R+++VGTTS+R +E+ A E G II P+
Sbjct: 230 HMHAEYVEVPQQVVDAIVATKAAGKRVIAVGTTSVRSVESAALAAQEKGFAQIIEPFFAD 289
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + T Y+ A+ + YRF+SYGD
Sbjct: 290 TSIFIYPGKQFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKSAVENRYRFFSYGD 349
Query: 353 TSLL 356
+
Sbjct: 350 AMFI 353
>gi|320104844|ref|YP_004180435.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase [Isosphaera
pallida ATCC 43644]
gi|319752126|gb|ADV63886.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase [Isosphaera
pallida ATCC 43644]
Length = 375
Score = 225 bits (574), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 145/376 (38%), Positives = 198/376 (52%), Gaps = 30/376 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EFDF+LPP RIA P RD ARLMVV ++ H +LP L S D +V
Sbjct: 1 MHISEFDFELPPDRIAQYPAERRDHARLMVVDRRAGT---MTHHRFYELPDLLTSGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N +KV+ A+L G R R E + + S W + A+ + G+ + ++
Sbjct: 58 RNTSKVVPARLLGRREATGGRWEG-LFVRAEVDASGLVWELLAQTRGHPRPGEWI-VINR 115
Query: 121 DGQSRLEATVIDKWNTG-EILLVFSISGIELERQISL-----------------VGTIPL 162
L D + G + LV G + ++ L G +PL
Sbjct: 116 RSDLELPTGSTDHEHEGLRLQLVGRGPGGTWKARLHLPDGPATDPDSVWTLLERFGEVPL 175
Query: 163 PPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHV 222
PPYI R D YQTTYA+ GSVAAPTAGLHFT L L G+ V +TLHV
Sbjct: 176 PPYIRHGREGTG-DRDRYQTTYAQTPGSVAAPTAGLHFTPELFETLERRGVGVADLTLHV 234
Query: 223 GAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE----T 278
G GTF P+ VE + H MH+E + TA+ LN ++RGGRIV+VGTTS R LE
Sbjct: 235 GIGTFRPLNVETIEAHHMHAETAHLPLATARRLNECRARGGRIVAVGTTSARTLEHVAHQ 294
Query: 279 ATTEDGIIN--PWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKM 336
T+ G + + G +++I PG+ F +D L++NFHLP+S+L++LVSA G+E +
Sbjct: 295 VVTKTGTVGFESFEGDVDLYIKPGHEFLGLDALITNFHLPRSSLIVLVSALAGVELIRDA 354
Query: 337 YQHAISHAYRFYSYGD 352
Y+ AI+ YRFYSYGD
Sbjct: 355 YRVAIAEGYRFYSYGD 370
>gi|209520460|ref|ZP_03269220.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Burkholderia sp. H160]
gi|209499105|gb|EDZ99200.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Burkholderia sp. H160]
Length = 352
Score = 225 bits (574), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 147/363 (40%), Positives = 203/363 (55%), Gaps = 22/363 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLV--ISDHLVSDLPAFLNSNDAIV 60
+ +FDFDLPP IA + R ++RL+ V + + D ++LP + + D +V
Sbjct: 4 LSDFDFDLPPELIAQVALPERSASRLLEVDTAGAADGAARLIDRRFTELPDCIAAGDLLV 63
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKV+ A RF ++ + S S R SK + G +
Sbjct: 64 FNDTKVLKA-----RFFGQKASGGKVEVLVERLTSERSALAQIRASKSPQAGTTIRL--A 116
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D +D++ T L F + L I G +PLPPYI + DA D Y
Sbjct: 117 DAFDVTVGERVDQFYT----LHFPDDCLML---IEQYGRLPLPPYI--EHDPDATDETRY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF LL+RL + G++ +TLHVGAGTF PV+VE+ +H M
Sbjct: 168 QTVFAQNPGAVAAPTAGLHFDDGLLARLDAHGVERATLTLHVGAGTFQPVRVENLAEHKM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI----INPWSGFTNIF 296
HSE + A + + K+RG R+++VGTTS+R LE A + + S T+IF
Sbjct: 228 HSEWYHLPQALADKIAATKARGNRVIAVGTTSMRALEAAARDAEAAGHPLAAASAETDIF 287
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI YRF+SYGD LL
Sbjct: 288 ITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIRAAYRHAIEERYRFFSYGDAMLL 347
Query: 357 FQK 359
++
Sbjct: 348 TRR 350
>gi|294782568|ref|ZP_06747894.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. 1_1_41FAA]
gi|294481209|gb|EFG28984.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. 1_1_41FAA]
Length = 351
Score = 225 bits (574), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 139/358 (38%), Positives = 208/358 (58%), Gaps = 26/358 (7%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
++D+ LP I +P PRDSA+LM++ N + H ++ +L D +V N T
Sbjct: 15 DYDYFLPEELIGQKPREPRDSAKLMLI--NRKTGEIEHKHFY-NIIDYLQKGDVLVRNAT 71
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHM----RVSPNSWSVYARPSKVIKKGDILHFFSQ 120
KVI A++ G KE L + R+S ++W +P+K +K G L+
Sbjct: 72 KVIPARIYGY---------KESGGVLEILLIKRISIDTWECLLKPAKKLKLGQKLYI--- 119
Query: 121 DGQSR-LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G+++ L A +++ G +L F G E + +G++PLPPYI RK ++ +D
Sbjct: 120 -GENKELIAELLEIKEDGNRILKFYYEG-SFEEVLDKLGSMPLPPYITRK--LENKD--R 173
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ SVAAPTAGLHFT LL ++ GI++ + L VG GTF PV+ E+ +H
Sbjct: 174 YQTVYAQRGESVAAPTAGLHFTEELLKKISEKGIEIVDIFLEVGLGTFRPVQTENVLEHK 233
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH E I A+A+N K++G RI+SVGTT+ R LE++ E+G + T IFI P
Sbjct: 234 MHEESFEISEKAAKAINEAKAQGRRIISVGTTATRALESSVDENGKLIAQKKDTGIFIYP 293
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY+F+ VD L++NFHLPKSTLLMLVSA E+ ++Y+ A+ Y F+S+GD+ ++
Sbjct: 294 GYQFKIVDALITNFHLPKSTLLMLVSALYDREKMLEIYKLAVKEEYHFFSFGDSMFIY 351
>gi|332174857|gb|AEE24111.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Glaciecola
agarilytica 4H-3-7+YE-5]
Length = 350
Score = 225 bits (574), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 139/360 (38%), Positives = 202/360 (56%), Gaps = 29/360 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V EF FDLP + IA P R ++RLM + L +D V DL +N D ++
Sbjct: 1 MKVSEFQFDLPEALIARYPTKERTASRLMHLAKTGLSHLQFTD--VVDL---INPGDLLI 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + V + + R SK K+G L
Sbjct: 56 FNNTRVIPARLLGQKASG-----GKVEVLIERIVDEHHVLAHVRASKSPKEGSQLLL--- 107
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLV---GTIPLPPYIARKRPIDARDY 177
+ ++E ++ + + +F + + E + ++ G +PLPPYI RP + D
Sbjct: 108 --EDKVEMEMVGRQDA-----LFKLKLLNPEPILEILEQYGHMPLPPYI--DRPDEESDK 158
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT Y + G+VAAPTAGLHF +L +L G+ FVTLHVGAGTF PV+V++ +
Sbjct: 159 ERYQTVYNEKPGAVAAPTAGLHFDDAILQKLKDKGVSTEFVTLHVGAGTFQPVRVDNILE 218
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET---ATTEDGI-INPWSGFT 293
H MHSE + A+ K+ G R+++VGTTS+R LE+ A + +G + P+ T
Sbjct: 219 HQMHSEYAEVPQNVIDAIAKTKAAGKRVIAVGTTSVRSLESAAKAASSNGTELAPFFSDT 278
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PGY+F+ VD +++NFHL +STL+MLVSAF G E YQ AI+ YRF+SYGD
Sbjct: 279 DIFIYPGYQFQVVDAMLTNFHLSESTLIMLVSAFAGKENVMSAYQEAIAQQYRFFSYGDA 338
>gi|310779236|ref|YP_003967569.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Ilyobacter
polytropus DSM 2926]
gi|309748559|gb|ADO83221.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Ilyobacter
polytropus DSM 2926]
Length = 343
Score = 225 bits (574), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 134/357 (37%), Positives = 196/357 (54%), Gaps = 24/357 (6%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
++D++LP I P PRD +RLM+V+ I ++ L D +V N+T
Sbjct: 7 DYDYNLPEELIGQTPAEPRDHSRLMLVNKKTGD---IEHKRFYNIIDSLKEGDVLVRNST 63
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHM----RVSPNSWSVYARPSKVIKKGDILHFFSQ 120
+VI A+L G K+ L + R N+W +K +K G + F +
Sbjct: 64 RVIPARLMG---------RKDTGAILEVFLLKRKDINTWECLIGNAKRLKIGQKV-FIGE 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + L A + + G +L F G+ E + +G +PLPPYI+ K R Y
Sbjct: 114 NNE--LVAELKEIKEDGNRILTFDYEGV-FEEILDKLGQMPLPPYISEKLSEKER----Y 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA SVAAPTAGLHFT +LL ++ G+++ + L VG GTF PV+ ED DH M
Sbjct: 167 QTVYAIKGESVAAPTAGLHFTEDLLEKIREKGVEIADLFLEVGLGTFRPVQTEDVLDHKM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + + + +N K G RI++VGTTS+R LE++ E+G + G T+IFI PG
Sbjct: 227 HEETYEVPEKSVEIINRAKEEGRRIIAVGTTSIRTLESSVDENGKLVAGKGTTDIFIYPG 286
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ VD L++NFHLPKSTLLMLVSAF E +Y+ A+ Y+F+S+GD ++
Sbjct: 287 YKFKIVDALITNFHLPKSTLLMLVSAFSSRELIMDVYEKAVIKKYQFFSFGDAMFIY 343
>gi|313158313|gb|EFR57715.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Alistipes
sp. HGB5]
Length = 349
Score = 225 bits (573), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 132/358 (36%), Positives = 195/358 (54%), Gaps = 12/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + ++ ++ P +A P RD +RLMV++ + + D+ + + D V
Sbjct: 1 MKLSQYGYEFAPEMLAKHPTENRDDSRLMVIN---RAKGTVEHRIFKDIIEYFDEKDLFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKV A+L G + E EI + W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK--EKTGAEIEIFLLRELNRELRLWDVLVDPARKIRIGNKLYFGDD 115
Query: 121 DGQSRLEATVIDKWNT-GEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
D L A VID + G L +F S E ++ + +G PLP ++ K ++ D
Sbjct: 116 D---LLVAEVIDNTTSRGRTLRFLFDGSYEEFKQALFSLGETPLPKWVRDK--VEPEDAE 170
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT +A+ +G+VAAPTAG+HF+ +L+ R+ GI F+TLHVG G F V VED H
Sbjct: 171 RYQTIFARHEGAVAAPTAGMHFSKHLMKRMEIKGIDKSFITLHVGLGNFRTVDVEDLSKH 230
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
M SE F+ A+A+NS K G +IV++GTT +R +ETA + +G+I P G+TN FI
Sbjct: 231 KMDSEQFFVTDEAAEAVNSAKRDGHKIVAIGTTVMRTVETAVSTNGMIKPMEGWTNKFIF 290
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F D +++NFHLP ST LM+V+AF G E Y+ A YRF +YGD L+
Sbjct: 291 APYEFTVADAMVTNFHLPYSTQLMMVAAFGGYETVMNAYKVAKEEGYRFGTYGDAMLI 348
>gi|167752308|ref|ZP_02424435.1| hypothetical protein ALIPUT_00552 [Alistipes putredinis DSM 17216]
gi|167660549|gb|EDS04679.1| hypothetical protein ALIPUT_00552 [Alistipes putredinis DSM 17216]
Length = 349
Score = 225 bits (573), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 134/358 (37%), Positives = 191/358 (53%), Gaps = 12/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + ++ +D +A P RD +RLMVV+ I + ++ + + D +
Sbjct: 1 MKLSQYGYDFSADLLAKYPAENRDESRLMVVN---RAKGTIEHRIFKEIIEYFDEKDLFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKV A+L G + E EI + W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK--EKTGAEIEIFLLRELNRELRLWDVLVDPARKIRIGNKLYFGDD 115
Query: 121 DGQSRLEATVIDKWNT-GEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
D L A VID + G L +F S E + + +G PLP ++ K ++ D
Sbjct: 116 D---LLVAEVIDNTTSRGRTLRFLFDGSYEEFKETLFKLGETPLPKWVREK--VEPEDAE 170
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT +A +G+VAAPTAG+HF+ +L R+ GI+ F+TLHVG G F V VED H
Sbjct: 171 RYQTIFASKEGAVAAPTAGMHFSKHLFKRMEIKGIEKAFITLHVGLGNFRTVDVEDLSKH 230
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
M SE F+D PTA+ +N K G +IVS+GTT +R LETA + G+I P G+TN FI
Sbjct: 231 KMDSEQFFVDEPTAETVNKTKREGHKIVSIGTTVMRTLETAVSTGGMIKPMEGWTNKFIF 290
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F D +++NF LP ST LM+VSAF G + Y+ A YRF +YGD L+
Sbjct: 291 APYEFSVADAMVTNFQLPYSTQLMMVSAFGGYDLIMNAYKIAKEEGYRFGTYGDAMLI 348
>gi|161525832|ref|YP_001580844.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia multivorans ATCC 17616]
gi|160343261|gb|ABX16347.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Burkholderia multivorans ATCC 17616]
Length = 368
Score = 225 bits (573), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 145/361 (40%), Positives = 201/361 (55%), Gaps = 21/361 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LPP IA + R ++RL+ V + P D ++LPA + D +VFN
Sbjct: 17 LSDFDFNLPPELIAQTALPDRTASRLLEVDAT-AEPARFVDRRFAELPACIARGDLLVFN 75
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKV+ A+ G + I + ++ R SK G L
Sbjct: 76 DTKVLKARFFGQKASG-----GRIEVLIERVTGSHTALAQIRASKSPGAGTTLRL----- 125
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ TV ++ L F +EL I G +PLPPYI + DA D YQT
Sbjct: 126 ADAFDVTVGERVEPF-FTLHFPQPCLEL---IEQYGRLPLPPYI--EHDPDATDETRYQT 179
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA G+VAAPTAGLHF LL++L ++GI+ +TLHVGAGTF PV+VE+ +H MHS
Sbjct: 180 VYASNPGAVAAPTAGLHFDEPLLAKLDAMGIERATLTLHVGAGTFQPVRVENIAEHKMHS 239
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI----INPWSGFTNIFIT 298
E + + + ++RGG++++VGTTS+R LE A + + T+IFIT
Sbjct: 240 EWYELPQSLVDKIAATRARGGKVIAVGTTSMRALEAAARDAEAAGRPLAATQAETDIFIT 299
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGYRFR VD L++NFHLPKSTL+MLVSAF GIE + Y+HAI YRF+SYGD LL +
Sbjct: 300 PGYRFRVVDRLVTNFHLPKSTLMMLVSAFAGIETIRAAYRHAIEQRYRFFSYGDAMLLTR 359
Query: 359 K 359
+
Sbjct: 360 R 360
>gi|227327498|ref|ZP_03831522.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pectobacterium carotovorum subsp. carotovorum WPP14]
Length = 355
Score = 225 bits (573), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 144/362 (39%), Positives = 207/362 (57%), Gaps = 25/362 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLV-SDLPAFLNSNDAI 59
M V +F F+LP S IA P R RL+ +L P H V +DL LN D +
Sbjct: 1 MRVTDFSFELPESLIAHYPQAERSGCRLL----SLDGPTGNLTHGVFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + ++ + + + + R SK K G L
Sbjct: 57 VFNNTRVIPARLFGRKAS-----GGKLEVLVERVLDDHRVLAHVRASKAPKPGTEL--LL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISL---VGTIPLPPYIARKRPIDARD 176
D +S ++AT+ + + +F + + +S+ +G +PLPPYI RP + D
Sbjct: 110 GDDES-VKATMAARHDA-----LFELHFDDSRDVLSILNDIGHMPLPPYI--DRPDEDAD 161
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT Y++ G+VAAPTAGLHF +L+ L GI + FVTLHVGAGTF PV+V+ +
Sbjct: 162 RELYQTVYSQRPGAVAAPTAGLHFDEPMLAALREKGIDMAFVTLHVGAGTFQPVRVDTIE 221
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE--TATTEDGIINPWSGFTN 294
DHIMH+E + A+ + K+RG R+++VGTTS+R LE +++ I P+ G T
Sbjct: 222 DHIMHAEYAEVPQDVVDAVLACKARGNRVIAVGTTSVRSLESAAQASQNAAIEPFFGDTK 281
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PGY +R +D L++NFHLP+STL+MLVSAF G + T Y+ A++ YRF+SYGD
Sbjct: 282 IFIYPGYHYRIIDALVTNFHLPESTLIMLVSAFAGYQNTLSAYRQAVAEQYRFFSYGDAM 341
Query: 355 LL 356
+
Sbjct: 342 FI 343
>gi|289548841|ref|YP_003473829.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Thermocrinis albus DSM 14484]
gi|289182458|gb|ADC89702.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Thermocrinis albus DSM 14484]
Length = 341
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 141/358 (39%), Positives = 200/358 (55%), Gaps = 25/358 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +EFD+ LP IA PV PR +ARLMV++ I + +LP +L D ++
Sbjct: 8 MRTEEFDYYLPKELIAKYPVEPRHAARLMVINRKDGS---IKHDIFWNLPLYLQEGDLVI 64
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV+ A+L G + + L V + W K I++G ++
Sbjct: 65 FNNSKVLPARLFGHKPTG-----GRVEILLTDYVDKHVWRALI-GGKNIREGMVIEV--- 115
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARK-RPIDARDYVD 179
G+ L+ V G+ VF IS + R + G IP+PPY+ R+ PID V
Sbjct: 116 -GED-LKVEVRRHLEGGK-FEVFLISS-DPARALDRYGHIPIPPYLEREDEPIDR---VY 168
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A+ +GSVAAPTA LHF+ LL RL GIK F+TLHV GTF PVKV + ++H
Sbjct: 169 YQTVFAQEEGSVAAPTASLHFSQELLDRLEEFGIKKAFITLHVSYGTFKPVKVSEVEEHR 228
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
+ E + T + + K +G R+V+VGTT +R LETA + P+ G+T+++I P
Sbjct: 229 VDPEYIKVPQETIELIKRTKEKGKRVVAVGTTVVRALETA-----VDKPYEGWTDLYIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY+F+ VD L++NFHLP+S+LL LV AF G + Y A+ YRFYSYGD L+
Sbjct: 284 GYQFKVVDALVTNFHLPRSSLLFLVCAFGGKDLIMHAYNVAVKERYRFYSYGDGMLIL 341
>gi|189349447|ref|YP_001945075.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia multivorans ATCC 17616]
gi|221202260|ref|ZP_03575294.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia multivorans CGD2M]
gi|221209150|ref|ZP_03582143.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia multivorans CGD2]
gi|189333469|dbj|BAG42539.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia multivorans ATCC 17616]
gi|221170968|gb|EEE03422.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia multivorans CGD2]
gi|221177834|gb|EEE10247.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia multivorans CGD2M]
Length = 355
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 145/361 (40%), Positives = 201/361 (55%), Gaps = 21/361 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LPP IA + R ++RL+ V + P D ++LPA + D +VFN
Sbjct: 4 LSDFDFNLPPELIAQTALPDRTASRLLEVDAT-AEPARFVDRRFAELPACIARGDLLVFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKV+ A+ G + I + ++ R SK G L
Sbjct: 63 DTKVLKARFFGQKASG-----GRIEVLIERVTGSHTALAQIRASKSPGAGTTLRL----- 112
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ TV ++ L F +EL I G +PLPPYI + DA D YQT
Sbjct: 113 ADAFDVTVGERVEPF-FTLHFPQPCLEL---IEQYGRLPLPPYI--EHDPDATDETRYQT 166
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA G+VAAPTAGLHF LL++L ++GI+ +TLHVGAGTF PV+VE+ +H MHS
Sbjct: 167 VYASNPGAVAAPTAGLHFDEPLLAKLDAMGIERATLTLHVGAGTFQPVRVENIAEHKMHS 226
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI----INPWSGFTNIFIT 298
E + + + ++RGG++++VGTTS+R LE A + + T+IFIT
Sbjct: 227 EWYELPQSLVDKIAATRARGGKVIAVGTTSMRALEAAARDAEAAGRPLAATQAETDIFIT 286
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGYRFR VD L++NFHLPKSTL+MLVSAF GIE + Y+HAI YRF+SYGD LL +
Sbjct: 287 PGYRFRVVDRLVTNFHLPKSTLMMLVSAFAGIETIRAAYRHAIEQRYRFFSYGDAMLLTR 346
Query: 359 K 359
+
Sbjct: 347 R 347
>gi|221214465|ref|ZP_03587436.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia multivorans CGD1]
gi|221165722|gb|EED98197.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia multivorans CGD1]
Length = 355
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 146/361 (40%), Positives = 200/361 (55%), Gaps = 21/361 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LPP IA + R ++RL+ V + P D ++LPA + D +VFN
Sbjct: 4 LSDFDFNLPPELIAQTALPDRTASRLLEVDAT-AEPARFVDRRFAELPACIARGDLLVFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKV+ A RF I + ++ R SK G L
Sbjct: 63 DTKVLKA-----RFFGQKASGGRIEVLIERVTGSHTALAQIRASKSPGAGTTLRL----- 112
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ TV ++ L F +EL I G +PLPPYI + DA D YQT
Sbjct: 113 ADAFDVTVGERVEPF-FTLHFPQPCLEL---IEQYGRLPLPPYI--EHDPDATDETRYQT 166
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA G+VAAPTAGLHF LL++L ++GI+ +TLHVGAGTF PV+VE+ +H MHS
Sbjct: 167 VYASNPGAVAAPTAGLHFDEPLLAKLDAMGIERATLTLHVGAGTFQPVRVENIAEHKMHS 226
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI----INPWSGFTNIFIT 298
E + + + ++RGG++++VGTTS+R LE A + + T+IFIT
Sbjct: 227 EWYELPQSLVDKIAAARARGGKVIAVGTTSMRALEAAARDAEAAGRPLAATQAETDIFIT 286
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGYRFR VD L++NFHLPKSTL+MLVSAF GIE + Y+HAI YRF+SYGD LL +
Sbjct: 287 PGYRFRVVDRLVTNFHLPKSTLMMLVSAFAGIETIRAAYRHAIEQRYRFFSYGDAMLLTR 346
Query: 359 K 359
+
Sbjct: 347 R 347
>gi|149277787|ref|ZP_01883927.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queuosine
biosynthesis protein) [Pedobacter sp. BAL39]
gi|149231475|gb|EDM36854.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queuosine
biosynthesis protein) [Pedobacter sp. BAL39]
Length = 349
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 136/363 (37%), Positives = 195/363 (53%), Gaps = 22/363 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP S +A P RD ARLMV+H + I + D+ ++ + D ++
Sbjct: 1 MKLSQFKFNLPESLVANNPSEHRDEARLMVLHKDSGK---IEHKIFKDVLSYFDDQDVMI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREK-----EISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
NNTKV A+L G +EK E+ + W V P++ I+ G+ L
Sbjct: 58 LNNTKVFPARLYG-------NKEKTGATIEVFLLRELNKELRLWDVLVDPARKIRVGNKL 110
Query: 116 HFFSQDGQSRLEATVIDKWNTG--EILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
+F D L A V+D + I +F + E + I ++G PLP YI RK
Sbjct: 111 YFGDDD---LLVAEVVDNTTSRGRTIRFLFDGTDEEFRKNIEILGETPLPKYIKRKAT-- 165
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
A+D YQT +AK +G+VAAPTAGLHF+ L+ RL G+ VTLHVG GTF V+VE
Sbjct: 166 AQDKERYQTIFAKHEGAVAAPTAGLHFSRELMKRLELKGVNFAEVTLHVGLGTFRSVEVE 225
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
D H M SE I+ A +N +I +VGTTS+R +E+A + + + +T
Sbjct: 226 DLTKHKMDSEQFIIEQKDADIVNKAIEHKRKICAVGTTSMRAIESAVSSGRTLKAANDWT 285
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+ FI P Y F + +++NFH P+STLLM+VSAF G + + Y A+ YRFYSYGD
Sbjct: 286 SKFIFPPYDFSIANSMITNFHTPESTLLMMVSAFGGYDYVRHAYDVALKEKYRFYSYGDA 345
Query: 354 SLL 356
L+
Sbjct: 346 MLI 348
>gi|224023490|ref|ZP_03641856.1| hypothetical protein BACCOPRO_00192 [Bacteroides coprophilus DSM
18228]
gi|224016712|gb|EEF74724.1| hypothetical protein BACCOPRO_00192 [Bacteroides coprophilus DSM
18228]
Length = 351
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 132/365 (36%), Positives = 193/365 (52%), Gaps = 20/365 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P RD +RLMVVH + I + D+ + + D +
Sbjct: 1 MKLSQFKFKLPEEKIALHPAKYRDESRLMVVHKSTG---EIEHVMFKDILNYFDDKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRRE----KEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
FN+TKV A+L G + R E +E++ L + W V P++ I+ G+ L+
Sbjct: 58 FNDTKVFPARLYGNKEKTGARIEVFLLRELNEELRL------WDVLVDPARKIRIGNKLY 111
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDA 174
F D + A VID + L F G E ++ + +G PLPP+I RP +
Sbjct: 112 FGDDDS---MVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYALGEPPLPPFI--HRPAEP 166
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D +QT +AK +G+V P AGLHF+ L+ R+ GI F+T+H G G F + VED
Sbjct: 167 EDEERFQTIFAKNEGAVTVPAAGLHFSRELMKRMEIKGIDFAFITMHCGLGNFRDIDVED 226
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
H M SE F++A + +N K RG ++ +VGTT +R +ETA DG + + G+TN
Sbjct: 227 LTKHKMDSEQMFVNAEACRIVNEAKDRGNKVCAVGTTVMRTIETAVGTDGHLKEFEGWTN 286
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
FI P Y F + ++SNF +P ST+LML A+ G E Y A+ YRF +YGD
Sbjct: 287 KFIFPPYDFSVANAMVSNFQMPLSTMLMLKCAYGGYELIMDAYNIALKENYRFGTYGDAM 346
Query: 355 LLFQK 359
L+ K
Sbjct: 347 LILDK 351
>gi|29348623|ref|NP_812126.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
thetaiotaomicron VPI-5482]
gi|253569034|ref|ZP_04846444.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 1_1_6]
gi|298386991|ref|ZP_06996545.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 1_1_14]
gi|29340528|gb|AAO78320.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
thetaiotaomicron VPI-5482]
gi|251841053|gb|EES69134.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 1_1_6]
gi|298260141|gb|EFI03011.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 1_1_14]
Length = 352
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 131/365 (35%), Positives = 195/365 (53%), Gaps = 19/365 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P RD +RLMV+H I + D+ + + D +
Sbjct: 1 MKLSQFKFKLPEDKIALHPTKYRDESRLMVLHRRTGE---IEHKMFKDVLNYFDDKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRRE----KEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
FN+TKV A+L G + R E +E++ L + W V P++ I+ G+ L+
Sbjct: 58 FNDTKVFPARLYGNKEKTGARIEVFLLRELNEELRL------WDVLVDPARKIRIGNKLY 111
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDA 174
F + D + A VID + L F G E ++ + +G PLP I RP++
Sbjct: 112 FGADDS---MVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYALGETPLPHSII-NRPVEP 167
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D +Q+ +AK +G+V APTA LHF+ L+ RL GI ++TLH G G F + VED
Sbjct: 168 EDSERFQSIFAKNEGAVTAPTASLHFSRELMKRLEIKGIDFAYITLHAGLGNFRDIDVED 227
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
H M SE ++A +N K +G + +VGTT +R +E+A + DG + + G+TN
Sbjct: 228 LTKHKMDSEQMIVNAEAVNTVNRAKDKGKNVCAVGTTVMRAIESAVSTDGHLKEFEGWTN 287
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
FI P Y F + ++SNFH+P STLLM+V+AF G E+ Y A+ YRF +YGD
Sbjct: 288 KFIFPPYEFTVANSMISNFHMPLSTLLMIVAAFGGYEQVMDAYHVALKEGYRFGTYGDAM 347
Query: 355 LLFQK 359
L+ K
Sbjct: 348 LILDK 352
>gi|187922704|ref|YP_001894346.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia phytofirmans PsJN]
gi|238689571|sp|B2SX83|QUEA_BURPP RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|187713898|gb|ACD15122.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Burkholderia phytofirmans PsJN]
Length = 352
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 145/381 (38%), Positives = 204/381 (53%), Gaps = 54/381 (14%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVH--PNLSCPLVISDHLVSDLPAFLNSNDA 58
+ + +FDFDLPP IA + R ++RL+ V + P + D ++LP + D
Sbjct: 2 LTLSDFDFDLPPELIAQVALPERSASRLLEVDNPAGAAGPARLIDRRFAELPECIAPGDL 61
Query: 59 IVFNNTKVITAQLNGVRFCH------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKG 112
+VFN+TKV+ A+ G + + R E + +R S + +P I+
Sbjct: 62 LVFNDTKVLKARFLGQKASGGKIEVLVERLTGERTALAQIRASKSP-----QPGTTIRLA 116
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
D F R+E L F + L I G +PLPPYI +
Sbjct: 117 DA---FDVTVGERVEPFYT---------LHFPDDCLTL---IEQFGRLPLPPYI--EHDP 159
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D+ D YQT +A+ G+VAAPTAGLHF LL+RL G++ +TLHVGAGTF PV+V
Sbjct: 160 DSTDETRYQTVFAQNPGAVAAPTAGLHFDDALLARLDEKGVERATLTLHVGAGTFQPVRV 219
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSL--------------RLLET 278
E+ +H MHSE + A + + ++RG R+++VGTTS+ R L
Sbjct: 220 ENLAEHKMHSEWYHLPQALADKIAATRARGNRVIAVGTTSMRALEAAARDAEAAGRPLAA 279
Query: 279 ATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQ 338
A+TE T+IFITPGY+FR VD L++NFHLPKSTLLMLVSAF G+E ++ Y+
Sbjct: 280 ASTE----------TDIFITPGYKFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIRETYR 329
Query: 339 HAISHAYRFYSYGDTSLLFQK 359
HAI YRF+SYGD LL ++
Sbjct: 330 HAIEQRYRFFSYGDAMLLTRR 350
>gi|149198170|ref|ZP_01875217.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lentisphaera araneosa HTCC2155]
gi|149138772|gb|EDM27178.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lentisphaera araneosa HTCC2155]
Length = 345
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 133/355 (37%), Positives = 187/355 (52%), Gaps = 14/355 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +++F+LP IA RP R +R+MV+ S ++ + P+FL D IV
Sbjct: 4 QLSDYNFNLPEELIAQRPPAQRQQSRMMVIDRQKSSREIVP---FENFPSFLKPGDLIVR 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNTKVI A+L G + ++ L W +P + ++ G + +
Sbjct: 61 NNTKVIPARLFGTK----KDSGGKVQALLCEERKTGLWQAMLKPGRRLRAGTEVLI---E 113
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ TV +K G L+ FS ++ + G IPLPPY+ R+ DA D YQ
Sbjct: 114 NSATEYFTVTEKLADGTYLIQFS--NPDVLHILDQFGHIPLPPYMNRED--DAEDRKRYQ 169
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A G+VAAPTAGLHFT + + G VTLH G GTF PV ED +H MH
Sbjct: 170 TVFADQPGAVAAPTAGLHFTDEVFAECAKNGADFADVTLHTGIGTFQPVSCEDLSEHQMH 229
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
SE +++ TA+ + K GGRI+++GTTS+R LET I+ G T IF+ P
Sbjct: 230 SEFYELNSVTAEKIRQAKKNGGRIIAIGTTSVRTLETCADPKNFISSGQGKTQIFLYPPK 289
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ + D L++NFHLPKSTLLML+S F EE K Y+ AI RF+SYGD L+
Sbjct: 290 QPQVTDCLLTNFHLPKSTLLMLISTFFPREEVLKAYEQAIEEKMRFFSYGDCMLI 344
>gi|289523146|ref|ZP_06440000.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Anaerobaculum hydrogeniformans ATCC BAA-1850]
gi|289503689|gb|EFD24853.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Anaerobaculum hydrogeniformans ATCC BAA-1850]
Length = 313
Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 133/312 (42%), Positives = 179/312 (57%), Gaps = 27/312 (8%)
Query: 52 FLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLH-MRVSPNS-----WSVYARP 105
+L D +VFN+TKVI A+ G +K + + V P W RP
Sbjct: 21 YLRRGDVLVFNDTKVIPARFLG---------QKPTGAKVEVLLVKPKDSAWEHWEAMVRP 71
Query: 106 SKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQI-SLVGTIPLPP 164
K ++ GD D S L V+D+ + G + + I G + I G +PLPP
Sbjct: 72 GKRLESGD--EVVIDDEASIL---VLDRLSQG--MRLVRIKGKDTPYNIIEKKGKVPLPP 124
Query: 165 YIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
YI + R YQT YA++ GSVAAPTAG HFT LL L S GI++ +VTLHVG
Sbjct: 125 YIRG----NGRASEYYQTVYARVDGSVAAPTAGFHFTEELLDELRSCGIELAYVTLHVGP 180
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDG 284
GTF PVKV+D H MH E I + TA+ +N K G RI++VGTT +R LE+++ E+G
Sbjct: 181 GTFRPVKVDDVRKHEMHCEDYHISSDTAETINRAKKEGRRIIAVGTTVVRCLESSSDEEG 240
Query: 285 IINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHA 344
+ G T++FI PGY+F+ VD +++NFHLPKSTLLMLVSAF G + + Y+ AI
Sbjct: 241 FVLFGKGSTDLFIFPGYKFKVVDGMVTNFHLPKSTLLMLVSAFAGYDFVMEAYKVAIERR 300
Query: 345 YRFYSYGDTSLL 356
YRFYS+GD L+
Sbjct: 301 YRFYSFGDAMLI 312
>gi|258514406|ref|YP_003190628.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Desulfotomaculum acetoxidans DSM 771]
gi|257778111|gb|ACV62005.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Desulfotomaculum acetoxidans DSM 771]
Length = 333
Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 135/353 (38%), Positives = 197/353 (55%), Gaps = 27/353 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV---HPNLSCPLVISDHLVSDLPAFLNSND 57
+ +++F+++LP IA P RD +RLMV+ +P I ++L +L D
Sbjct: 3 LKLEDFNYNLPEELIAQEPSANRDESRLMVLFRDNPQ------IEHRRFNNLVEYLKPGD 56
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+V N+TKV+ A+L G++ + L ++ N W +P + + G L F
Sbjct: 57 VLVINDTKVMPARLYGLKDTGAT-----VEVLLLKQLDGNRWETLVKPGRKARIGTTLTF 111
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDAR 175
+L V G ++ F G +E+ QI G +PLPPYI +K P D
Sbjct: 112 AG----GKLTGLVAGDTEAGGRVIDFLYQGSFVEILEQI---GIMPLPPYI-KKIPADPG 163
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
Y QT YA GS AAPTAGLHFT LL ++ +G+++ V LHVG TF PVKVE+
Sbjct: 164 RY---QTVYANRFGSAAAPTAGLHFTDQLLDKIKDLGVEIVPVLLHVGLDTFRPVKVENI 220
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+H MHSE I A A +N+ K+RGGRI++VGTT+ R LE++ +DG + SG+T I
Sbjct: 221 REHRMHSEYYEISAGVADKINAAKARGGRIIAVGTTTTRCLESSAGDDGRLKTGSGWTKI 280
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
FI PGYRF+ +D L++NFHLP STL+MLVSA G ++ + Y A+ + +
Sbjct: 281 FIYPGYRFKIIDGLITNFHLPCSTLIMLVSALSGRDKILEAYNTAVKKKVQIF 333
>gi|189460198|ref|ZP_03008983.1| hypothetical protein BACCOP_00835 [Bacteroides coprocola DSM 17136]
gi|189433059|gb|EDV02044.1| hypothetical protein BACCOP_00835 [Bacteroides coprocola DSM 17136]
Length = 351
Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 132/365 (36%), Positives = 193/365 (52%), Gaps = 20/365 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P RD +RLMVVH I + D+ + + D +
Sbjct: 1 MKLSQFKFKLPEDKIALHPAKYRDESRLMVVHKATG---EIEHVVFKDILNYFDDKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRRE----KEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
FN+TKV A+L G + R E +E++ L + W V P++ I+ G+ L+
Sbjct: 58 FNDTKVFPARLYGNKEKTGARIEVFLLRELNEELRL------WDVLVDPARKIRIGNKLY 111
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDA 174
F D + A VID + L F G E ++ + +G PLPP+I RP +
Sbjct: 112 FGDDDS---MVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYALGEPPLPPFI--HRPAEP 166
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D +QT +AK +G+V P AGLHF+ L+ R+ GI F+T+H G G F + VED
Sbjct: 167 EDEERFQTIFAKNEGAVTVPAAGLHFSRELMKRMEIKGIDFSFITMHCGLGGFRDIDVED 226
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
H M SE F++A + +N K RG ++ +VGT +R +ETA DG + + G+TN
Sbjct: 227 LTKHKMDSEQMFVEAEACRIVNEAKDRGNKVCAVGTDVMRAIETAVGTDGHLKEFEGWTN 286
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
FI P Y F + ++SNFH+P ST+LMLV ++ G E Y A+ YRF +YGD
Sbjct: 287 KFIFPPYDFSLANAMVSNFHMPLSTMLMLVCSYGGYELVMDAYNIALKEDYRFGTYGDAM 346
Query: 355 LLFQK 359
L+ K
Sbjct: 347 LILDK 351
>gi|317493041|ref|ZP_07951465.1| tRNA ribosyltransferase-isomerase [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316919163|gb|EFV40498.1| tRNA ribosyltransferase-isomerase [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 357
Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 136/368 (36%), Positives = 208/368 (56%), Gaps = 37/368 (10%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLV-SDLPAFLNSNDAI 59
M V +F F+LP + IA P R + RL+ +L P +H V +D+ +++ D +
Sbjct: 1 MRVSDFSFELPDNLIARYPQAERSACRLL----SLDGPTGKLEHGVFTDVLNKIDAGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCH------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGD 113
+FNNT+VI A+L G + + R + H+R S + +P + GD
Sbjct: 57 IFNNTRVIPARLFGRKASGGKLEVLVERLLDDTRVLAHVRASKSP-----KPGAELLLGD 111
Query: 114 ILHFFSQDGQSRLEATVIDKWNTGEILLVFSI---SGIELERQISLVGTIPLPPYIARKR 170
+ T++ + +T +F + G ++ ++ G +PLPPYI R
Sbjct: 112 ---------NEDIRVTMVARHDT-----LFELRFEDGRDVLTILNAAGHMPLPPYI--DR 155
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
P + D YQT Y+ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV
Sbjct: 156 PDEDADRELYQTVYSSRPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPV 215
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--ATTEDGIINP 288
+V+ ++H MHSE + A+ + K+RG R+++VGTTS+R +E+ A +D +I P
Sbjct: 216 RVDTIENHTMHSEYAEVPQDVVDAVLACKARGNRVIAVGTTSVRSIESAAAAAKDQLIAP 275
Query: 289 WSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
+ T IFI PGY ++ +D L++NFHLP+STL+MLVSAF G + T Y A++ YRF+
Sbjct: 276 FFDDTQIFIYPGYHYQVIDALITNFHLPESTLIMLVSAFAGYKNTMHAYHEAVAKEYRFF 335
Query: 349 SYGDTSLL 356
SYGD +
Sbjct: 336 SYGDAMFI 343
>gi|218961722|ref|YP_001741497.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Cloacamonas acidaminovorans]
gi|167730379|emb|CAO81291.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Cloacamonas acidaminovorans]
Length = 346
Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 135/351 (38%), Positives = 187/351 (53%), Gaps = 17/351 (4%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
+D+ LP IA P R +RLM V I H + + L D ++ N++K
Sbjct: 11 YDYYLPKELIAQFPAEKRTDSRLMQVKRQ---SREIYHHRFTAILELLKEGDLVIINSSK 67
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSR 125
V A+L + +I L +++ N+W A+P K +K LHF S
Sbjct: 68 VFPARLFATK-----ETGAKIEILLLHQLNENTWQCIAKPGKKLKSPQWLHF------SD 116
Query: 126 LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYA 185
+ I + N+ I + + +I +G IPLPPYI R I D YQT YA
Sbjct: 117 NLSGYISQGNSEGIREIQFTCKTDFWDEIKRIGHIPLPPYIERSDTI--LDSERYQTVYA 174
Query: 186 KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIG 245
K GS+AAPTAG HF + +L L G+ V LH+G GTF PVK + DH MHSE+
Sbjct: 175 KENGSIAAPTAGFHFDAEILKALKKKGVLFSEVILHIGIGTFRPVKTKRITDHKMHSELA 234
Query: 246 FIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRA 305
I TA A+N K G R+V VGTTS+R +E+ +DG + S +T++FI PG+ F+
Sbjct: 235 TIPEITAAAINLAKKEGRRVVCVGTTSVRSVESF-WQDGEMQSGSKWTDLFIYPGFNFKV 293
Query: 306 VDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
D L++NFHLPKSTLLM++SAF G E +K Y A+ YRF+SYGD +
Sbjct: 294 TDALLTNFHLPKSTLLMMISAFGGWETIRKAYNIAVQEKYRFFSYGDAMFI 344
>gi|110639429|ref|YP_679638.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cytophaga
hutchinsonii ATCC 33406]
gi|123058555|sp|Q11QL8|QUEA_CYTH3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|110282110|gb|ABG60296.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Cytophaga
hutchinsonii ATCC 33406]
Length = 348
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 131/362 (36%), Positives = 198/362 (54%), Gaps = 21/362 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EF F LP +A P RD A++MV++ I + D+ + + D +V
Sbjct: 1 MKLSEFKFALPAELVAQHPAANRDEAKMMVIN---RATGTIEHKIFKDIINYFDEGDIMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRRE----KEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
NNTKV A+L G + + E +E++ LH+ W V P++ I+ G+ L+
Sbjct: 58 MNNTKVFPARLYGNKEKTGAKIEVFLLRELNAELHL------WDVLVDPARKIRVGNKLY 111
Query: 117 FFSQDGQSRLEATVIDKWNTG--EILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
F G+S L A V+D + I +F + + + I +G PLP YI KRPI+
Sbjct: 112 F----GESDLVAEVVDNTTSRGRTIRFLFDGNSEDFSKIIETIGETPLPRYI--KRPIEE 165
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D YQT +A+ +G+VAAPTAGLHFT ++ R+ G+ +TLHVG G+F V VED
Sbjct: 166 ADKDRYQTIFAENKGAVAAPTAGLHFTKQVMKRMEIKGVNFAPLTLHVGLGSFRTVDVED 225
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
H M SE I++ TA +N R+ ++GTTS+R LE++ + + + +G+T+
Sbjct: 226 LTKHKMDSENFIIESTTADVVNKALDNKKRVCAIGTTSMRALESSVSANNRLKQNAGWTD 285
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
FI P Y F+ + +++NFH+P+STL M+ AF G E K Y+ AI Y F SYGD
Sbjct: 286 RFIFPPYDFKIANCMLTNFHMPESTLYMMACAFGGYELMTKAYKTAIKEKYNFLSYGDVM 345
Query: 355 LL 356
L+
Sbjct: 346 LI 347
>gi|119713610|gb|ABL97661.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [uncultured
marine bacterium EB0_39H12]
Length = 341
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 135/359 (37%), Positives = 201/359 (55%), Gaps = 25/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++++F+LP + IA P R S+RL++ L D SDL L + D +V
Sbjct: 1 MDIEDYNFELPEALIAKEPKSERSSSRLLIAEDRLI------DKKFSDLIDSLGNGDLLV 54
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV A+L + ++ + ++ N+ + ++ +++ + L Q
Sbjct: 55 INDTKVFKARLEAQKVSG-----GKVELLIERKIDANNALALTKSNRPLRESERL----Q 105
Query: 121 DGQSRLEATVIDKWNTGEILLV-FSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ + A +I K G + L+ FS +++ + GT+PLPPYI RK P D D
Sbjct: 106 VTNTNIFADIIKK--DGYLSLIQFSE---DIDDILDGFGTVPLPPYIDRK-P-DDNDEAR 158
Query: 180 YQTTYAKIQG--SVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YA SVAAPTAGLHF + LL R+ G+ + +TL++G GTF P+K D
Sbjct: 159 YQTVYADANNMNSVAAPTAGLHFDNELLERIKDKGVNIASITLNIGIGTFKPIKQNDVRK 218
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
HIMHSE ++ A +N RI VGTTSLR LE+ ++ I + G T+IFI
Sbjct: 219 HIMHSEKIYLSESNANIINEALLSNSRIFCVGTTSLRCLESIYSKFDEIKSYEGETDIFI 278
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PG++F+ D L++NFHLPK+TLL+LVSAF G++ + Y+HAI YRF+SYGD LL
Sbjct: 279 YPGFKFKVADYLITNFHLPKTTLLLLVSAFSGLDRIQAAYKHAIEKEYRFFSYGDAMLL 337
>gi|298483291|ref|ZP_07001470.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. D22]
gi|298270608|gb|EFI12190.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. D22]
Length = 352
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 131/365 (35%), Positives = 196/365 (53%), Gaps = 19/365 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P+ RD +RLMV+H N I + D+ + + D +
Sbjct: 1 MKLSQFKFKLPEDKIALHPMKYRDESRLMVLHRNTGK---IEHKMFKDVLDYFDDKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRRE----KEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
FN+TKV A+L G + R E +E++ L + W V P++ I+ G+ L+
Sbjct: 58 FNDTKVFPARLYGNKEKTGARIEVFLLRELNEELRL------WDVLVDPARKIRIGNKLY 111
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDA 174
F D + A VID + L F G E ++ + +G PLP I RP++
Sbjct: 112 FGPDDS---MVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYSLGETPLPHSII-NRPVEP 167
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D +Q+ +AK +G+V APTA LHF+ L+ RL GI ++TLH G G F + VED
Sbjct: 168 EDAERFQSIFAKNEGAVTAPTASLHFSRELMKRLEIKGIDFAYITLHAGLGNFRDIDVED 227
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
H M SE F++ + +N K G + +VGTT +R +E+A + DG + + G+TN
Sbjct: 228 LTKHKMDSEQMFVNEMAVKTVNRAKDNGRNVCAVGTTVMRAIESAVSTDGHLKEFEGWTN 287
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
FI P Y F + ++SNFH+P STLLM+V+AF G ++ Y A+ YRF +YGD
Sbjct: 288 KFIFPPYEFTVANSMISNFHMPLSTLLMIVAAFGGYDQVMDAYHVALKEGYRFGTYGDAM 347
Query: 355 LLFQK 359
L+ K
Sbjct: 348 LILDK 352
>gi|206896247|ref|YP_002247231.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Coprothermobacter proteolyticus DSM 5265]
gi|206738864|gb|ACI17942.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Coprothermobacter proteolyticus DSM 5265]
Length = 343
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 127/352 (36%), Positives = 192/352 (54%), Gaps = 19/352 (5%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
+++LP IA + PRD+ RL+VVH + + D + ++ D +V NNTK
Sbjct: 11 LNYELPKHLIAQKLSDPRDACRLLVVHRDTGT---LEDKRFYQIKDYVKPGDVLVLNNTK 67
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSR 125
V+ A++ G R + + L + N W +P + IK G++L
Sbjct: 68 VLKARIKGRR-----KTGGAVEILLVRPLRDNVWECLLKPLRKIKIGEVLLLNGGAEVKL 122
Query: 126 LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYA 185
LE T ++ +S EL+ + G +P PPYI RK P + +YQT +A
Sbjct: 123 LERT------ERTAIIELGMSAQELDSYLDDWGEVPTPPYIRRKVPAE-----EYQTVFA 171
Query: 186 KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIG 245
G+VAAPTAGLHFT NLL L ++G+K+ +VTLHV GTF + + + +H E
Sbjct: 172 SKPGAVAAPTAGLHFTENLLQDLKNMGVKISYVTLHVALGTFESLASDWQEKSELHQETF 231
Query: 246 FIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRA 305
F+ A T + +N K G + +VGTT +R LE+A +DG +N T++FI PGY ++
Sbjct: 232 FVSAETTKTVNEAKESGHSVFAVGTTVVRSLESAACDDGKLNSVFSDTSLFIKPGYSWKV 291
Query: 306 VDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
VD L++NFHLP+++LL+LVS+F + K Y+HAI Y+FYS GD L+
Sbjct: 292 VDKLVTNFHLPQTSLLLLVSSFATPDLILKAYRHAIEEEYKFYSLGDAMLIL 343
>gi|326801376|ref|YP_004319195.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sphingobacterium sp. 21]
gi|326552140|gb|ADZ80525.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sphingobacterium sp. 21]
Length = 349
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 137/363 (37%), Positives = 193/363 (53%), Gaps = 22/363 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP S IA P RD ARLMV+ I + D+ + +D ++
Sbjct: 1 MKLSQFKFNLPDSLIAHEPAETRDEARLMVLDRKTGA---IEHKIFKDVLNYFEEHDVMI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREK-----EISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
NNTKV A+L G +EK E+ + W V P++ I+ G+ L
Sbjct: 58 LNNTKVFPARLYG-------NKEKTGATIEVFLLRELNKELRLWDVLVDPARKIRVGNKL 110
Query: 116 HFFSQDGQSRLEATVIDKWNTG--EILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
+F D L A V+D + I +F S E R I ++G PLP YI RK P
Sbjct: 111 YFGDND---LLVAEVVDNTTSRGRTIRFLFDGSDEEFRRNIEILGETPLPKYIKRK-PT- 165
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT +AK +G+VAAPTAGLHF+ L+ RL G++ VTLHVG GTF V+VE
Sbjct: 166 PEDKFRYQTIFAKNEGAVAAPTAGLHFSRELMKRLELKGVEFAEVTLHVGLGTFRQVEVE 225
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
D H M SE I+ A +N + R+ +VGTTS+R +E+A + + + + +T
Sbjct: 226 DLTKHKMDSEQFIIEQKDADIVNKAIAEKRRVCAVGTTSMRSIESAVSANRTLKAANDWT 285
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+ FI P Y F + +++NFH P+STLLM++ AF G E Y+ A+ YRFYSYGD
Sbjct: 286 SKFIFPPYDFSIANSMITNFHTPESTLLMMICAFGGYEHVMNAYEIAVKEKYRFYSYGDA 345
Query: 354 SLL 356
L+
Sbjct: 346 MLI 348
>gi|227537334|ref|ZP_03967383.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sphingobacterium spiritivorum ATCC 33300]
gi|300769814|ref|ZP_07079694.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sphingobacterium spiritivorum ATCC 33861]
gi|227242837|gb|EEI92852.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sphingobacterium spiritivorum ATCC 33300]
gi|300763265|gb|EFK60081.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sphingobacterium spiritivorum ATCC 33861]
Length = 349
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 135/363 (37%), Positives = 193/363 (53%), Gaps = 22/363 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP S +A P RD ARLMV+H + I + D+ + + D ++
Sbjct: 1 MKLSQFKFNLPESLLASEPSEQRDEARLMVLHRDSGK---IEHKIFKDVLDYFDDKDVMI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREK-----EISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
NNTKV A++ G +EK E+ + W V P++ I+ G+ L
Sbjct: 58 LNNTKVFPARMYG-------NKEKTGATIEVFLLRELNKELRLWDVLVDPARKIRVGNKL 110
Query: 116 HFFSQDGQSRLEATVIDKWNTG--EILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
+F D L A V+D + I +F + E R I ++G PLP YI RK
Sbjct: 111 YFGDDD---LLVAEVVDNTTSRGRTIRFLFDGTDEEFRRNIEILGETPLPKYIKRKAT-- 165
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT YAK +G+VAAPTAGLHF+ L+ RL G+ VTLHVG GTF V+VE
Sbjct: 166 PEDKYRYQTIYAKNEGAVAAPTAGLHFSRELMKRLELKGVDFAEVTLHVGLGTFRTVEVE 225
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
D H M SE I A+ +N R+ +VGTTS+R +E++ + D + S +T
Sbjct: 226 DLTKHKMDSEQFIITEEAARIVNKGIDNKRRVCAVGTTSMRAIESSVSADRHLKAASDWT 285
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+ FI P Y F + +++NFH P+STLL++++AF G E Y+ A+ YRFYSYGD
Sbjct: 286 SKFIYPPYDFSIANSMITNFHTPESTLLVMIAAFAGYENVMNAYEVAVKEKYRFYSYGDA 345
Query: 354 SLL 356
L+
Sbjct: 346 MLI 348
>gi|322834079|ref|YP_004214106.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Rahnella
sp. Y9602]
gi|321169280|gb|ADW74979.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Rahnella
sp. Y9602]
Length = 356
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 140/362 (38%), Positives = 206/362 (56%), Gaps = 25/362 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLV-SDLPAFLNSNDAI 59
M V +F F+L S IA P R RL+ +L P H V +D+ ++ D +
Sbjct: 1 MRVADFSFELSESLIARYPQTQRSGCRLL----SLDGPSGELTHGVFTDILDKIHPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A++ G + +I + + + + R SK K G L
Sbjct: 57 VFNNTRVIPARVFGRKVSG-----GKIEVLVERVLDTHRVLAHVRASKSPKPGAELLLGD 111
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISL---VGTIPLPPYIARKRPIDARD 176
++ ++AT++ + +T +F + E +L +G +PLPPYI RP + D
Sbjct: 112 KED---IKATMVARHDT-----LFELEFNEDRDVFTLLNEIGHMPLPPYI--DRPDEDAD 161
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT Y++ G+VAAPTAGLHF L+ L + G++ FVTLHVGAGTF PV+V+ +
Sbjct: 162 RELYQTVYSERPGAVAAPTAGLHFDEPLMDALKAKGVEFAFVTLHVGAGTFQPVRVDTIE 221
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTN 294
DHIMH+E + A+ + K+RG +V+VGTTS+R LE+A +ED +I P+ G T
Sbjct: 222 DHIMHAEYAEVPQDVVDAVLACKARGNNVVAVGTTSVRSLESAAKASEDALIAPFFGDTK 281
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PGY ++ +D L++NFHLP+STL+MLVSAF G + T Y A++ Y F+SYGD
Sbjct: 282 IFIYPGYHYQVIDSLITNFHLPESTLIMLVSAFAGYKNTMNAYHQAVAEQYHFFSYGDAM 341
Query: 355 LL 356
+
Sbjct: 342 FI 343
>gi|186477272|ref|YP_001858742.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia phymatum STM815]
gi|238691287|sp|B2JGG8|QUEA_BURP8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|184193731|gb|ACC71696.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Burkholderia phymatum STM815]
Length = 353
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 144/358 (40%), Positives = 199/358 (55%), Gaps = 21/358 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDFDLPP IA + R ++RL+ V+ + P +D ++LP + D +VFN
Sbjct: 4 LSDFDFDLPPELIAQTALPERSASRLLEVN-GQTTPASFADRRFAELPECIQPGDLLVFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKV+ A RF +I + + R SK G +L D
Sbjct: 63 DTKVLKA-----RFLGQKASGGKIEVLVERLTGERTALAQIRASKSPGPGTVLRL--ADA 115
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
++ + T L F + L Q G +PLPPYI + DA D YQT
Sbjct: 116 FDVTVGERVEPFYT----LHFPDDCLTLIEQF---GRLPLPPYI--EHDPDAFDETRYQT 166
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ G+VAAPTAGLHF ++ +RL + G++ +TLHVGAGTF PV+VE+ +H MHS
Sbjct: 167 VYAQNPGAVAAPTAGLHFDDSIFARLDAKGVERATLTLHVGAGTFQPVRVENIAEHKMHS 226
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI----INPWSGFTNIFIT 298
E + + + ++RG R+++VGTTS+R LE A + + S T+IFIT
Sbjct: 227 EWYQLPQSLVDRIAATRARGNRVIAVGTTSMRALEAAARDADAAGKPLAATSAETDIFIT 286
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+FR VD L++NFHLPKSTLLMLVSAF GIE + Y+HAI YRF+SYGD LL
Sbjct: 287 PGYKFRVVDRLVTNFHLPKSTLLMLVSAFAGIETIRAAYRHAIDGRYRFFSYGDAMLL 344
>gi|323524790|ref|YP_004226943.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Burkholderia sp. CCGE1001]
gi|323381792|gb|ADX53883.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Burkholderia sp. CCGE1001]
Length = 352
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 147/379 (38%), Positives = 202/379 (53%), Gaps = 54/379 (14%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLV--ISDHLVSDLPAFLNSNDAIV 60
+ +FDFDLPP IA + R ++RL+ V + D S+LP ++ D +V
Sbjct: 4 LSDFDFDLPPELIAQVALPERSASRLLQVDNAADAERAARLVDRRFSELPDCISPGDLLV 63
Query: 61 FNNTKVITAQLNGVRFCH------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
FN+TKV+ A+ G + + R E + +R S + +P I+ D
Sbjct: 64 FNDTKVLKARFLGQKASGGKIEVLVERLTGERTALAQIRASKSP-----QPGTTIRLADA 118
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
F R+E L F + L I G +PLPPYI + DA
Sbjct: 119 ---FDVTVGERVEPFYT---------LHFPADCLTL---IEQHGRLPLPPYI--EHDPDA 161
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D YQT YA+ G+VAAPTAGLHF +L +RL + G++ +TLHVGAGTF PV+VE+
Sbjct: 162 VDETRYQTVYAQNPGAVAAPTAGLHFDESLFARLDAHGVERATLTLHVGAGTFQPVRVEN 221
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSL--------------RLLETAT 280
+H MHSE + A + + K+RG R+++VGTTS+ R L A+
Sbjct: 222 LAEHKMHSEWYHLPQSLADKIAATKARGNRVIAVGTTSMRALEAAARDAEAAGRPLGAAS 281
Query: 281 TEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHA 340
TE T+IFITPGY+FR VD L++NFHLPKSTLLMLVSAF G+E + Y+HA
Sbjct: 282 TE----------TDIFITPGYKFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIRAAYRHA 331
Query: 341 ISHAYRFYSYGDTSLLFQK 359
I YRF+SYGD LL ++
Sbjct: 332 IEQRYRFFSYGDAMLLTRR 350
>gi|262068283|ref|ZP_06027895.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium periodonticum ATCC 33693]
gi|291378021|gb|EFE85539.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium periodonticum ATCC 33693]
Length = 343
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 139/358 (38%), Positives = 208/358 (58%), Gaps = 26/358 (7%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
++D+ LP I +P PRDSA+LM++ N + H ++ +L D +V N T
Sbjct: 7 DYDYFLPEELIGQKPREPRDSAKLMLI--NRKTGEIEHKHFY-NIIDYLQKGDILVRNAT 63
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHM----RVSPNSWSVYARPSKVIKKGDILHFFSQ 120
KVI A++ G KE L + R+S ++W +P+K +K G L+
Sbjct: 64 KVIPARIYG---------HKESGGVLEVLLIKRISIDTWECLLKPAKKLKLGQKLYI--- 111
Query: 121 DGQSR-LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G+++ L A +++ G +L F G E + +G++PLPPYI RK ++ +D
Sbjct: 112 -GENKELIAELLEIKEDGNRILKFYYEG-SFEEVLDKLGSMPLPPYITRK--LENKD--R 165
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ SVAAPTAGLHFT LL ++ GI++ + L VG GTF PV+ E+ +H
Sbjct: 166 YQTVYAQRGESVAAPTAGLHFTEELLRKISEKGIEIVDIFLEVGLGTFRPVQTENVLEHK 225
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH E I A+A+N K++G RI+SVGTT+ R LE++ E+G + T IFI P
Sbjct: 226 MHEESFEISEKAAKAINEAKAQGRRIISVGTTATRALESSVDENGKLIAQKRDTGIFIYP 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY+F+ VD L++NFHLPKSTLLMLVSA E+ ++Y+ A+ Y F+S+GD+ ++
Sbjct: 286 GYQFKIVDALITNFHLPKSTLLMLVSALYDREKILEIYKMAVKEEYHFFSFGDSMFIY 343
>gi|50083827|ref|YP_045337.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter sp. ADP1]
gi|81613338|sp|Q6FEJ3|QUEA_ACIAD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|49529803|emb|CAG67515.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein ) [Acinetobacter sp. ADP1]
Length = 344
Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 140/361 (38%), Positives = 198/361 (54%), Gaps = 22/361 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F+FDLP IA P+ R ++RL+ +L DH +D+ +N D +V
Sbjct: 1 MQLSDFNFDLPDELIARYPLDTRSASRLL----HLDAHGHYHDHAFTDILDLINDGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G R I + + + + S K G L
Sbjct: 57 LNDTKVMKARLKGKRAS-----GGAIEILVERMLDNQIAHCHIKASNTPKAGAELFV--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G++ ++ TV + E L V S L + G +P+PPY R+ + D Y
Sbjct: 109 -GENGIKVTVQGRH---ENLFVVEFSEPILS-VLDRYGQLPIPPYFNRE--AEEIDTERY 161
Query: 181 QTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
QT + Q SVAAPTA LHF +LL +L + I+ FVTLHVGAGTFMPV+ +D +H
Sbjct: 162 QTVFHDPQKIASVAAPTASLHFDQDLLEKLAAKNIQKTFVTLHVGAGTFMPVRTDDIKNH 221
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFI 297
IMHSE + TA+ + K+RG ++++VGTT+ R LE+A + G I+ W+G T IFI
Sbjct: 222 IMHSEWCDVPESTAELIRQTKARGNKVIAVGTTATRALESAAQANGGKIDAWTGDTQIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+F VD L++NFHLP+STLLMLVSA Y+HA+ YRF+SYGD L+
Sbjct: 282 YPGYQFCVVDRLITNFHLPESTLLMLVSALSNRNNILSAYEHAVQSKYRFFSYGDAMLID 341
Query: 358 Q 358
Q
Sbjct: 342 Q 342
>gi|160884925|ref|ZP_02065928.1| hypothetical protein BACOVA_02915 [Bacteroides ovatus ATCC 8483]
gi|237716908|ref|ZP_04547389.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. D1]
gi|237722117|ref|ZP_04552598.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 2_2_4]
gi|260172716|ref|ZP_05759128.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. D2]
gi|262405676|ref|ZP_06082226.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 2_1_22]
gi|293368622|ref|ZP_06615229.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
ovatus SD CMC 3f]
gi|294644382|ref|ZP_06722145.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
ovatus SD CC 2a]
gi|294810219|ref|ZP_06768884.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
xylanisolvens SD CC 1b]
gi|299145177|ref|ZP_07038245.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 3_1_23]
gi|315921006|ref|ZP_07917246.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|156109960|gb|EDO11705.1| hypothetical protein BACOVA_02915 [Bacteroides ovatus ATCC 8483]
gi|229442891|gb|EEO48682.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. D1]
gi|229448986|gb|EEO54777.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 2_2_4]
gi|262356551|gb|EEZ05641.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 2_1_22]
gi|292636264|gb|EFF54749.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
ovatus SD CMC 3f]
gi|292640217|gb|EFF58472.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
ovatus SD CC 2a]
gi|294442576|gb|EFG11378.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
xylanisolvens SD CC 1b]
gi|295085896|emb|CBK67419.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
xylanisolvens XB1A]
gi|298515668|gb|EFI39549.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 3_1_23]
gi|313694881|gb|EFS31716.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 352
Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 130/365 (35%), Positives = 196/365 (53%), Gaps = 19/365 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P+ RD +RLMV+H N I + D+ + + D +
Sbjct: 1 MKLSQFKFKLPEDKIALHPMKYRDESRLMVLHRNTGK---IEHKMFKDVLDYFDDKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRRE----KEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
FN+TKV A+L G + R E +E++ L + W V P++ I+ G+ L+
Sbjct: 58 FNDTKVFPARLYGNKEKTGARIEVFLLRELNEELRL------WDVLVDPARKIRIGNKLY 111
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDA 174
F D + A VID + L F G E ++ + +G PLP I RP++
Sbjct: 112 FGPDDS---MVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYSLGETPLPHSII-NRPVEP 167
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D +Q+ +AK +G+V APTA LHF+ L+ RL G+ ++TLH G G F + VED
Sbjct: 168 EDAERFQSIFAKNEGAVTAPTASLHFSRELMKRLEIKGVDFAYITLHAGLGNFRDIDVED 227
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
H M SE F++ + +N K G + +VGTT +R +E+A + DG + + G+TN
Sbjct: 228 LTKHKMDSEQMFVNEMAVKTVNRAKDNGRNVCAVGTTVMRAIESAVSTDGHLKEFEGWTN 287
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
FI P Y F + ++SNFH+P STLLM+V+AF G ++ Y A+ YRF +YGD
Sbjct: 288 KFIFPPYEFTVANSMISNFHMPLSTLLMIVAAFGGYDQVMDAYHVALKEGYRFGTYGDAM 347
Query: 355 LLFQK 359
L+ K
Sbjct: 348 LILDK 352
>gi|116748011|ref|YP_844698.1| queuosine biosynthesis protein [Syntrophobacter fumaroxidans MPOB]
gi|116697075|gb|ABK16263.1| Queuosine biosynthesis protein [Syntrophobacter fumaroxidans MPOB]
Length = 357
Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 139/359 (38%), Positives = 201/359 (55%), Gaps = 15/359 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHL-VSDLPAFLNSNDAIVF 61
++E+D+DLPPS IA P+ R+ +RL+V+ DH+ DLP L++ D +V
Sbjct: 10 LREYDYDLPPSLIAQSPLSRREESRLLVLDRGRGA----MDHVRFRDLPDHLHAEDLLVV 65
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFFS 119
N+T+V+ A+L G + R E ++ + + A +K + G ++
Sbjct: 66 NDTRVVPARLIGFKDSG-GRIELLVTEPYKSEAEGRRDGYWCLAAAAKRTRPGCLISL-- 122
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID-ARDYV 178
DG A V++ + G I + F L +S +G +PLPPYI R D D
Sbjct: 123 PDGTV---AEVLEAGDGGRIRVRFP-DDRPLMTILSEIGAVPLPPYINRSGTGDFPGDAE 178
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YA+ G+VAAPTAGLHF+S LL + G++V +TLHVG GTF P++V+D DH
Sbjct: 179 AYQTVYARNPGAVAAPTAGLHFSSALLEAVARAGVEVVRITLHVGYGTFAPIRVDDIRDH 238
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH E +D + + + S R RIV+VGTT +R LE G I P +G +I
Sbjct: 239 EMHPEYVRVDEDSTERIRSAIDRKRRIVAVGTTVVRSLEWIAHRRGEIMPAAGACAHYIY 298
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGYRF+ VD +++NFHLP+S+LL+LVSAF G + Y+ AI YRF+SYGD L+
Sbjct: 299 PGYRFKVVDAMITNFHLPRSSLLLLVSAFAGRRRILEAYREAIRREYRFFSYGDAMLIL 357
>gi|124023814|ref|YP_001018121.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prochlorococcus marinus str. MIT 9303]
gi|166216737|sp|A2CBJ6|QUEA_PROM3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|123964100|gb|ABM78856.1| Queuosine biosynthesis protein [Prochlorococcus marinus str. MIT
9303]
Length = 371
Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 137/358 (38%), Positives = 194/358 (54%), Gaps = 16/358 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D+ L P RIA PV PR +ARL++V P P + V D L + D +V
Sbjct: 9 LLSSYDYPLDPERIAQLPVEPRHAARLLIVQPLGMKPPIARHAEVWDWQEELRAGDLLVI 68
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRV-SPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L + R ++ L + W RP+K ++ GD L +
Sbjct: 69 NDTRVLKARLR------VRRSGGGLAELLVLEPRGEGRWLCLGRPAKRLRPGDQL-WLEA 121
Query: 121 DGQSRLEATVI--DKWNTGEILLVFS--ISGIELERQISLVGTIPLPPYIARKRPIDARD 176
G+ + VI D + G ++ S + +LE + G +PLPPYI P D+
Sbjct: 122 LGEEPIALQVISKDSASGGRVVQFPSHYANAEQLELLLERYGEVPLPPYIKCHDPSDSER 181
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
Y QT YA G+VAAPTAGLH + LL L G+ + VTLHVG GTF PV+ ED
Sbjct: 182 Y---QTRYASRPGAVAAPTAGLHLSDELLEALKQRGVMLTSVTLHVGLGTFRPVETEDLR 238
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNI 295
+HSE + A+ + ++R GR+++VGTTS+R LE A G + + G ++
Sbjct: 239 HLQLHSEWVEVRDEVVAAVMACRARAGRVIAVGTTSVRALEGAALAGGGFLQSFCGPVDL 298
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
I PGYRF VD L++NFHLPKS+LL+LVSA G E +Y AI H YRF+SYGD
Sbjct: 299 VIQPGYRFAVVDGLLTNFHLPKSSLLLLVSAMVGRERLLALYAEAIEHHYRFFSYGDA 356
>gi|161830489|ref|YP_001597061.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Coxiella
burnetii RSA 331]
gi|189038518|sp|A9NDS1|QUEA_COXBR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|161762356|gb|ABX77998.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Coxiella
burnetii RSA 331]
Length = 343
Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 135/352 (38%), Positives = 197/352 (55%), Gaps = 18/352 (5%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+FD++LP IA RP+ R +RL+ + + +S + + ND +V N+T
Sbjct: 9 DFDYNLPVELIAQRPLADRSGSRLLYIDRSRR---TVSHRQFNGFVEQVKPNDLVVLNDT 65
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQS 124
KVI A+L G + + ++ C + +S + + + R SK K G + + + +
Sbjct: 66 KVIPARLFGHK-----QTGGKVECLVERILSKDRFLAHIRASKAPKLGSQI-IIADNFKI 119
Query: 125 RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTY 184
+E D + E +L S S ++L Q G IPLPPYI +R D D YQT +
Sbjct: 120 IIEGRYNDLF---ECVLHSSASILDLLYQ---HGRIPLPPYI--QREPDKDDQARYQTIF 171
Query: 185 AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEI 244
A+ G+VAAPTAGLHF L G + +VTLHVGAGTF PV+ + DH MH E
Sbjct: 172 AERAGAVAAPTAGLHFNEETFDALRKKGAAITYVTLHVGAGTFQPVRADSLADHRMHHEW 231
Query: 245 GFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFR 304
+ A+ + GR+++VGTT +R LETA T++ P++G T++FI PG++F
Sbjct: 232 MEVSKAVCDAIAKCRKNNGRVIAVGTTVMRCLETA-TKNSECRPYAGETDLFIYPGFQFN 290
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
VD L++NFHLPKSTLLMLV AF G E + YQ A+ + YRF+SYGD L+
Sbjct: 291 CVDALLTNFHLPKSTLLMLVCAFGGYELVMEAYQKAVENRYRFFSYGDAMLI 342
>gi|325971231|ref|YP_004247422.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Spirochaeta
sp. Buddy]
gi|324026469|gb|ADY13228.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Spirochaeta
sp. Buddy]
Length = 346
Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 136/353 (38%), Positives = 199/353 (56%), Gaps = 13/353 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +KE+ FDLP IA P+ R RL+V+ + I D ++ ++L +V
Sbjct: 1 MTIKEYSFDLPEHLIAQTPIDRRGEDRLLVLDKHSG---TIIDEQMTHFASYLQEGSILV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN+KV A R I+ + + +SW+V +K G F +
Sbjct: 58 VNNSKVRKA-----RVFAISETKSRVEFLFLEENLDHSWNVMVTKTKKQHVGKHYTFCTA 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D QS + I K N + + + + E +G +PLPPYI R+ D Y
Sbjct: 113 D-QSYVRTGCITKANEDGTRTI-TFNHVLDEDFFLKLGHVPLPPYIKREDCF--ADENRY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +GSVAAPTAGLHFT +L+ + + G + VTLHVG GTF+PV+ ++ +DH M
Sbjct: 169 QTIYAQKEGSVAAPTAGLHFTQEILASIRAKGCTIVPVTLHVGPGTFLPVRTDNLEDHHM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWSGFTNIFITP 299
H E I+ +A+ +N K++G +IV+ GTTS+R LE+A TE G++ G TN+FI P
Sbjct: 229 HYESYEIEEESARIINQAKAQGRKIVATGTTSVRTLESAFNTETGLLESGQGRTNLFIRP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
Y F+ VD L++NFH P+STLL+LVS F G E+ + Y+HA+ +YRF+SYGD
Sbjct: 289 PYTFKIVDQLLTNFHTPESTLLVLVSTFAGKEKIDRAYRHAVEQSYRFFSYGD 341
>gi|148242891|ref|YP_001228048.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus sp. RCC307]
gi|166218752|sp|A5GUY6|QUEA_SYNR3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|147851201|emb|CAK28695.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
[Synechococcus sp. RCC307]
Length = 363
Score = 223 bits (567), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 143/360 (39%), Positives = 203/360 (56%), Gaps = 24/360 (6%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D++LP + IA RP+ PR +ARL++V P C D V DL L D +V
Sbjct: 9 LLSSYDYELPEACIAQRPLEPRHAARLLMVEPEAGC----RDRQVWDLLEELEPGDLLVV 64
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS---WSVYARPSKVIKKGDILHFF 118
N+T+V+ A+L R + + P W ARP+K ++ GD +
Sbjct: 65 NDTRVLRARLQ--------VRRAGGGLGELLVLQPQGQGQWLCLARPAKRLRPGDSIALV 116
Query: 119 SQDGQSRLEATVID-KWNTGEILLVF---SISGIELERQISLVGTIPLPPYIARKRPIDA 174
+ DG+ L V+ + ++G L+ F + LE + G +PLPPYI ++ D
Sbjct: 117 A-DGEPDLPLQVLAVEESSGGRLIQFPPECVDAASLEPLLLRYGVMPLPPYIHQQ---DE 172
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D YQT +A G+VAAPTAGLH + LL+ L GI+ VTLHVG GTF PV+ ED
Sbjct: 173 SDNARYQTCFASKPGAVAAPTAGLHLSEELLAALTQKGIERASVTLHVGLGTFRPVETED 232
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE-TATTEDGIINPWSGFT 293
+HSE + QA+ + + RGGR+++VGTTS+R LE A G++ P+ G
Sbjct: 233 LSQLELHSEWVEVSEALVQAVAACRKRGGRVIAVGTTSVRSLEGVAALHGGVLQPFRGPV 292
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
N+ I PG+RF V L++NFHLPKS+LL+LVSA G E ++YQHAI+ YRFYSYGD
Sbjct: 293 NLVIQPGFRFAVVQGLLTNFHLPKSSLLLLVSALIGRERLLQLYQHAITAGYRFYSYGDA 352
>gi|332141988|ref|YP_004427726.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Alteromonas
macleodii str. 'Deep ecotype']
gi|238693253|sp|B4RVF4|QUEA_ALTMD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|327552010|gb|AEA98728.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Alteromonas
macleodii str. 'Deep ecotype']
Length = 348
Score = 223 bits (567), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 137/366 (37%), Positives = 203/366 (55%), Gaps = 31/366 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M + +F F LP + IA P R ++RL+ +L +H + +D+ F+ D +
Sbjct: 1 MKLSDFSFVLPENLIAKYPTQQRTASRLL----HLDGKNGKVEHTMFADMLKFVEPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + ++ + S + + R SK K G L
Sbjct: 57 VFNNTRVIPARLLGKK-----ETGGQVEVLIERITSDTTALAHVRASKAPKPGTKLIL-- 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLV---GTIPLPPYIARKRPIDARD 176
+ ++ TV TG +F + E ++L+ G +PLPPYI RP + D
Sbjct: 110 ---EEKVNVTV-----TGRDDALFILQFDHDETVLTLLEAHGHMPLPPYI--DRPDENSD 159
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT Y + G+VAAPTAGLHF ++L+ L G+ + FVTLHVGAGTF PV+V++
Sbjct: 160 KERYQTVYNEKPGAVAAPTAGLHFDDSILNALKEKGVNLAFVTLHVGAGTFQPVRVDNIQ 219
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT------EDGIINPWS 290
+H MH+E + A+ + K+ G R+++VGTTS+R LE+A ++ II P++
Sbjct: 220 EHKMHAEFAEVPQDVVDAVLNTKANGKRVIAVGTTSVRSLESAAKASAERGDEQIIAPFN 279
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
T IFI PG+ F+ VD + +NFHLP+STL+ML+SAF G E YQ AI+ YRF+SY
Sbjct: 280 EDTEIFIYPGFEFKVVDAMFTNFHLPESTLMMLISAFAGKENVMNAYQEAIAKEYRFFSY 339
Query: 351 GDTSLL 356
GD +
Sbjct: 340 GDAMFI 345
>gi|330836555|ref|YP_004411196.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Spirochaeta coccoides DSM 17374]
gi|329748458|gb|AEC01814.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Spirochaeta coccoides DSM 17374]
Length = 346
Score = 223 bits (567), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 136/357 (38%), Positives = 196/357 (54%), Gaps = 13/357 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF FDLP IA P R ++ L+V+ ++D + D +FL + +V
Sbjct: 1 MKTKEFFFDLPEELIAQTPSERRGASHLLVLDKTTGK---LTDSSMEDFASFLPEDAVMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN+KV A+ G I+ ++ + +W+V SK K G F +
Sbjct: 58 INNSKVRKARAYG-----ISGSGGKVEFLFLEENADQTWNVMVTKSKKQKSGKEYVFHAP 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DG+ A +I + G + F+ E Q G +PLPPYI R+ D Y
Sbjct: 113 DGRIGASAQIIRENPDGTKTVSFNAPITEAFFQ--ECGHVPLPPYIKREDTFS--DESRY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +GSVAAPTAGLHFT +L + G++V VTLHVG GTF+P++V+D +DH M
Sbjct: 169 QTIYARPEGSVAAPTAGLHFTGEILDSIRERGVQVVPVTLHVGPGTFLPMRVDDIEDHHM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWSGFTNIFITP 299
H E + TA+ + K+ +++VGTTS+R LE+A + G++ P G TN+FITP
Sbjct: 229 HYERYEVPEDTARIVTDAKANNRPVIAVGTTSIRTLESAWDSVHGMLTPGQGRTNLFITP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
G+ +R + L++NFH P+STLL+LVSAF G + Y HAI Y F+SYGD +
Sbjct: 289 GFTYRVANHLLTNFHTPESTLLVLVSAFAGKDLIFSAYHHAIERRYHFFSYGDAMFI 345
>gi|78065287|ref|YP_368056.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia sp. 383]
gi|91207416|sp|Q39JF4|QUEA_BURS3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|77966032|gb|ABB07412.1| Queuosine biosynthesis protein [Burkholderia sp. 383]
Length = 355
Score = 222 bits (566), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 143/361 (39%), Positives = 202/361 (55%), Gaps = 21/361 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LPP IA + R ++RL+ V ++ P + D ++LP+ +++ D +VFN
Sbjct: 4 LSDFDFNLPPELIAQTALPDRTASRLLEVDGTVA-PARLVDRHFTELPSCISAGDLLVFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKV+ A RF +I + ++ R SK G L D
Sbjct: 63 DTKVLKA-----RFFGQKASGGKIEVLIERVTGTHTALAQIRASKSPGAGTTLRL--ADA 115
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+D + T L F ++L I G +PLPPYI + DA D YQT
Sbjct: 116 FDVTVGERVDPFFT----LNFPEPCLDL---IEQYGRLPLPPYI--EHDPDATDETRYQT 166
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA G+VAAPTAGLHF +L RL ++G++ +TLHVGAGTF PV+V++ +H MHS
Sbjct: 167 VYASNPGAVAAPTAGLHFDQPMLDRLDAMGVERATLTLHVGAGTFQPVRVDNIAEHKMHS 226
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI----INPWSGFTNIFIT 298
E + + + ++RGG +++VGTTS+R LE A + T+IFIT
Sbjct: 227 EWYDLPQSLVDKIAATRARGGNVIAVGTTSMRALEAAARAADEAGRPLAATQAETDIFIT 286
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGYRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI YRF+SYGD LL +
Sbjct: 287 PGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIRAAYRHAIEQRYRFFSYGDAMLLTR 346
Query: 359 K 359
+
Sbjct: 347 R 347
>gi|167580652|ref|ZP_02373526.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia thailandensis TXDOH]
gi|167618756|ref|ZP_02387387.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia thailandensis Bt4]
gi|257137994|ref|ZP_05586256.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia thailandensis E264]
Length = 357
Score = 222 bits (565), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 142/363 (39%), Positives = 201/363 (55%), Gaps = 21/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FDFDLPP IA + R ++RL+ V N S P + D ++LPA + D +V
Sbjct: 2 LTLSDFDFDLPPELIAQTALPERSASRLLEVD-NASAPPRLVDRRFAELPACVAPGDLLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKV+ A+ G + +I + + R SK G L
Sbjct: 61 FNDTKVLKARFFGRKASG-----GKIEVLIERVTGQRTALAQIRASKSPAPGTTLTL--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ TV ++ L + +ER G +PLPPYI + DA D Y
Sbjct: 113 --ADAFDVTVGERVEPFFTLHFPDDCLVLIERH----GRLPLPPYI--EHTPDATDEARY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H M
Sbjct: 165 QTVFAANPGAVAAPTAGLHFDDAVLAALDARGVERATLTLHVGAGTFQPVRVENIAEHRM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI----INPWSGFTNIF 296
H E + + + + ++RGGR+++VGTTS+R LE A + + T+IF
Sbjct: 225 HRESYELTDALVEKIAATRARGGRVIAVGTTSMRALEAAARDADAAGRPLAATRAETDIF 284
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFR VD L++NFHLPKSTLLMLVSAF G++ + Y+HAI YRF+SYGD LL
Sbjct: 285 ITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVDTIRAAYRHAIDARYRFFSYGDAMLL 344
Query: 357 FQK 359
++
Sbjct: 345 TRR 347
>gi|255010308|ref|ZP_05282434.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
fragilis 3_1_12]
gi|313148106|ref|ZP_07810299.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
fragilis 3_1_12]
gi|313136873|gb|EFR54233.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
fragilis 3_1_12]
Length = 352
Score = 222 bits (565), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 130/365 (35%), Positives = 192/365 (52%), Gaps = 19/365 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P RD +RLMV+H I + D+ + + D V
Sbjct: 1 MKLSQFKFKLPEEKIALHPTKYRDESRLMVLHKRTGE---IEHKMFKDILNYFDDKDVFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRRE----KEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
FN+TKV A+L G + R E +E++ L + W V P++ I+ G+ L+
Sbjct: 58 FNDTKVFPARLYGNKEKTGARIEVFLLRELNEELRL------WDVLVDPARKIRIGNKLY 111
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDA 174
F D + A VID + L F G E ++ + +G PLP I RP++
Sbjct: 112 FGDDDS---MVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYALGETPLPHTIL-NRPVEE 167
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D +Q+ +AK +G+V APTA LHF+ L+ R+ GI ++TLH G G F + VED
Sbjct: 168 EDAERFQSIFAKNEGAVTAPTASLHFSRELMKRMEIKGIDFAYITLHAGLGNFRDIDVED 227
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
H M SE F+ + +N K G + +VGTT +R +E+ + DG + + G+TN
Sbjct: 228 LTKHKMDSEQMFVTGEAVKIVNRAKDLGRNVCAVGTTVMRAIESTVSTDGHLKEYEGWTN 287
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
FI P Y F + ++SNFH+P STLLM+V+AF G E+ Y A+ YRF +YGD
Sbjct: 288 KFIFPPYDFTVANAMVSNFHMPLSTLLMIVAAFGGYEQVMDAYHIALKEGYRFGTYGDAM 347
Query: 355 LLFQK 359
L+ K
Sbjct: 348 LILDK 352
>gi|254448135|ref|ZP_05061598.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [gamma
proteobacterium HTCC5015]
gi|198262261|gb|EDY86543.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [gamma
proteobacterium HTCC5015]
Length = 349
Score = 222 bits (565), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 138/360 (38%), Positives = 207/360 (57%), Gaps = 33/360 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F FDLP IA P+ R +RL+ + + S P+ D +++ L+ D +V
Sbjct: 1 MKTQDFHFDLPSELIAQVPLERRVDSRLLCLSGD-SGPV---DRQFANVIDMLDPGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCH------INRREKEISCTLHMRVSPNSWSVYARP-SKVIKKGD 113
N+T+VI A+L+G + I R E H+R S + +P ++++ +G
Sbjct: 57 LNDTRVIPARLHGNKASGGKLEVLIERITDEHRALCHIRCSRSP-----KPGTRIVLEGV 111
Query: 114 ILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
+ EA ++ + G + V L + G +PLPPYI R +
Sbjct: 112 V------------EAEILGR--QGALFDVQFDPAKPLMDWLLEYGHMPLPPYIERSD--E 155
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
A D YQT +A+ G+VAAPTAGLHF ++++ L + G+++ VTLHVGAGTF PVKV+
Sbjct: 156 ASDQERYQTVFAEKAGAVAAPTAGLHFDQDMMAALEAKGVRIAKVTLHVGAGTFQPVKVD 215
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
+ +H MHSE + T +A++ +SRGGR+V+VGTT +R LE+ D P+ G T
Sbjct: 216 EIAEHTMHSERIDVGEETCRAISETRSRGGRVVAVGTTVVRSLESLPEGDH-PQPYCGET 274
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFITPG+ FR +D+L++NFHLP STLLMLVSA G ++ Y+HA+ YRF+SYGD
Sbjct: 275 DIFITPGFSFRFIDVLITNFHLPCSTLLMLVSALGGYDKVMSAYRHAVEQRYRFFSYGDA 334
>gi|109897552|ref|YP_660807.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Pseudoalteromonas atlantica T6c]
gi|123361096|sp|Q15WI5|QUEA_PSEA6 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|109699833|gb|ABG39753.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Pseudoalteromonas atlantica T6c]
Length = 346
Score = 222 bits (565), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 134/359 (37%), Positives = 201/359 (55%), Gaps = 29/359 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V EF FDLP + IA P R ++RLM + +S +D+ +N D ++
Sbjct: 1 MKVSEFQFDLPEALIARYPTKERTASRLMHL-----ATTGLSHLQFTDVVNLINPGDLLI 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K+G L
Sbjct: 56 FNNTRVIPARLLGQKASG-----GKVEVLIERIIDEHHVLAHVRASKSPKEGTQLLL--- 107
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLV---GTIPLPPYIARKRPIDARDY 177
+ ++E ++ + + +F++ + E + ++ G +PLPPYI RP + D
Sbjct: 108 --EGKVEMEMVGRQDA-----LFTLKLLNPEPILEILEQYGHMPLPPYI--DRPDEESDK 158
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT Y + G+VAAPTAGLHF +L +L G+ FVTLHVGAGTF PV+V++ +
Sbjct: 159 ERYQTVYNEKPGAVAAPTAGLHFDDVILKQLRDKGVNTEFVTLHVGAGTFQPVRVDNILE 218
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT---EDGI-INPWSGFT 293
H MHSE + A+ K+ G R+++VGTTS+R LE+A E+G + + T
Sbjct: 219 HQMHSEYAEVPQNVVDAIAKTKTAGKRVIAVGTTSVRSLESAAKAALENGTALASFFSDT 278
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IFI PGY+F+ +D +++NFHL +STL+MLVSAF G E YQ AI+ YRF+SYGD
Sbjct: 279 DIFIYPGYKFQVIDAMLTNFHLSESTLIMLVSAFAGKENVMNAYQEAIAQQYRFFSYGD 337
>gi|167571173|ref|ZP_02364047.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia oklahomensis C6786]
Length = 351
Score = 221 bits (564), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 147/361 (40%), Positives = 201/361 (55%), Gaps = 21/361 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDFDLPP IA + R ++RL+ V N S P + D ++LPA + D +VFN
Sbjct: 4 LSDFDFDLPPELIAQTALPERSASRLLEVD-NTSEPPRLVDRRFAELPACVAPGDLLVFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKV+ A RF I + + R SK G L
Sbjct: 63 DTKVLKA-----RFFGHKASGGRIEVLIERVTGARTALAQIRASKRPAPGTTLTL----- 112
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ATV ++ L F + L I G +PLPPYI + DA D YQT
Sbjct: 113 ADAFDATVGERVEPF-FTLHFPEDCLGL---IERYGRLPLPPYI--EHTPDATDETRYQT 166
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
+A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H MH
Sbjct: 167 VFAANPGAVAAPTAGLHFDDAVLAALDARGVERATLTLHVGAGTFQPVRVENLAEHKMHR 226
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN-PWSGF---TNIFIT 298
E + + + + ++RGGR+++VGTTS+R LE A + P S T+IFIT
Sbjct: 227 EWYELTGALVEKIAATRARGGRVIAVGTTSMRALEAAARDAEAAGRPLSATRAETDIFIT 286
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGYRFR VD L++NFHLPKSTLLMLVSAF G++ + Y+HAI+ YRF+SYGD LL +
Sbjct: 287 PGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVDTIRAAYRHAIAARYRFFSYGDAMLLTR 346
Query: 359 K 359
+
Sbjct: 347 R 347
>gi|83720404|ref|YP_441826.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia thailandensis E264]
gi|83654229|gb|ABC38292.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia thailandensis E264]
Length = 374
Score = 221 bits (564), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 143/363 (39%), Positives = 202/363 (55%), Gaps = 21/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FDFDLPP IA + R ++RL+ V N S P + D ++LPA + D +V
Sbjct: 19 LTLSDFDFDLPPELIAQTALPERSASRLLEVD-NASAPPRLVDRRFAELPACVAPGDLLV 77
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKV+ A+ G + +I + + R SK G L
Sbjct: 78 FNDTKVLKARFFGRKASG-----GKIEVLIERVTGQRTALAQIRASKSPAPGTTLTLADA 132
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ TV ++ L + +ER G +PLPPYI + DA D Y
Sbjct: 133 -----FDVTVGERVEPFFTLHFPDDCLVLIERH----GRLPLPPYI--EHTPDATDEARY 181
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H M
Sbjct: 182 QTVFAANPGAVAAPTAGLHFDDAVLAALDARGVERATLTLHVGAGTFQPVRVENIAEHRM 241
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN-PWSGF---TNIF 296
H E + + + + ++RGGR+++VGTTS+R LE A + P + T+IF
Sbjct: 242 HRESYELTDALVEKIAATRARGGRVIAVGTTSMRALEAAARDADAAGRPLAATRAETDIF 301
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFR VD L++NFHLPKSTLLMLVSAF G++ + Y+HAI YRF+SYGD LL
Sbjct: 302 ITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVDTIRAAYRHAIDARYRFFSYGDAMLL 361
Query: 357 FQK 359
++
Sbjct: 362 TRR 364
>gi|303249320|ref|ZP_07335551.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfovibrio fructosovorans JJ]
gi|302489288|gb|EFL49247.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfovibrio fructosovorans JJ]
Length = 375
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 141/369 (38%), Positives = 198/369 (53%), Gaps = 27/369 (7%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ + FDLPP RIA RP RD+ +LM V ++D + SDLP L + +V
Sbjct: 21 LLASYHFDLPPERIASRPCEKRDACKLMTVSRATGA---VADAVFSDLPDLLPAGALLVV 77
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCT-----LHMRVSPNS-WSVYA-----RPSKVIK 110
NNTKV +L G + + E+ T L V P++ W+V R S+ K
Sbjct: 78 NNTKVAPVRLFGHK---PSGGAAELLLTTPVALLAPTVDPDTGWAVAPASGLLRVSRPPK 134
Query: 111 KGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKR 170
GD + F L T + G + G L +S +G +PLPPYI +R
Sbjct: 135 PGDRVDFAPD-----LRLTTTRRGQFGRTDFILHWQG-SLPDILSRIGHVPLPPYI--RR 186
Query: 171 PIDARDYVDYQTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFM 228
DA D YQT YA+ GS AAPTAGLHFT LL+RL G + VT HVG GTF
Sbjct: 187 ADDADDRKTYQTVYARDDKLGSAAAPTAGLHFTEGLLTRLRERGFGLAAVTCHVGIGTFS 246
Query: 229 PVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINP 288
PV+V+D DH MH E + A+A+ K+ G +V+VGTT+ R LE E G +
Sbjct: 247 PVRVDDIRDHAMHKEWIEVPGEAAEAVRRAKAEGRPVVAVGTTAARTLEGVVREAGEMTA 306
Query: 289 WSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
++G T+IFI PG+ F+ VD +++NFHLP S+L+++++A G + Y A++ YRF+
Sbjct: 307 FAGETDIFIRPGHAFKMVDGMVTNFHLPGSSLVIMLAALVGRQPLLAAYARAVASGYRFF 366
Query: 349 SYGDTSLLF 357
SYGD L+
Sbjct: 367 SYGDAMLVL 375
>gi|146283382|ref|YP_001173535.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
stutzeri A1501]
gi|145571587|gb|ABP80693.1| S-adenosylmethionine:trna ribosyltransferase-isomerase [Pseudomonas
stutzeri A1501]
Length = 321
Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 134/319 (42%), Positives = 181/319 (56%), Gaps = 35/319 (10%)
Query: 47 SDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPS 106
+DL + D +VFNNT+VI A+L G + ++ + + S + R S
Sbjct: 16 ADLLDCVRPGDLMVFNNTRVIPARLFGQKATG-----GKLEILVERVIGNRSVLAHVRSS 70
Query: 107 KVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILL----VFSISGIE-----LERQISLV 157
K K G + ++D T E++ +F ++ E LER +
Sbjct: 71 KSPKPGSQI--------------LLDGGGTAEMVARHDTLFELAFDEDVLPLLER----I 112
Query: 158 GTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYF 217
G +PLPPYI RP DA D YQT YA+ G+VAAPTAGLHF LL L G++ +
Sbjct: 113 GHMPLPPYI--DRPDDAADRERYQTVYAQRAGAVAAPTAGLHFDEALLGALRDAGVQTAY 170
Query: 218 VTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE 277
VTLHVGAGTF PV+VE ++H MH E + A+ ++RGGR+++VGTTS+R LE
Sbjct: 171 VTLHVGAGTFQPVRVERIEEHHMHHEWLEVTQEVVDAVAVCRARGGRVIAVGTTSVRSLE 230
Query: 278 TATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMY 337
TA DG + P+SG T+IFI PG F VD L++NFHLP+STLLMLVSAF G ET Y
Sbjct: 231 TA-ARDGELKPFSGDTDIFIYPGKTFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAY 289
Query: 338 QHAISHAYRFYSYGDTSLL 356
A++ YRF+SYGD +
Sbjct: 290 AEAVAQRYRFFSYGDAMFI 308
>gi|294674502|ref|YP_003575118.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
ruminicola 23]
gi|294471740|gb|ADE81129.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
ruminicola 23]
Length = 354
Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 125/360 (34%), Positives = 193/360 (53%), Gaps = 13/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P F RD +LMV+H + S ++ + + +DA +
Sbjct: 1 MKLSQFKFKLPEEQIALEPPFHRDECKLMVLH--RKSKRIESGLDFRNILDYFDEDDAFI 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + + +I L ++ + W V P++ I+ G+ L FF
Sbjct: 59 FNDTKVFPARLYGTK----EKTDAKIEVFLLRELNADQRLWDVLVEPARKIRIGNKL-FF 113
Query: 119 SQDGQSRLEATVIDKWNT-GEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
+DG + A VID + G L ++ E ++ + +G PLP YI +RP D
Sbjct: 114 EEDGP--MVAEVIDNTTSRGRTLRFLYDCPHDEFKQMLFGLGEAPLPRYIIDRRPATEED 171
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
++QT YAK +G+V AP GLHF+ L+ R+ GI F+TLH G G F ++VED
Sbjct: 172 MTNFQTIYAKNEGAVTAPATGLHFSRELMKRMEIKGINFAFITLHCGLGNFDAIEVEDLT 231
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE FI A + +N K G R+ VG ++ R E+A DG++ + G+TN F
Sbjct: 232 KHKMSSEQMFIPAEACEIVNKAKEEGHRVCCVGVSTARATESAVGTDGMLKEFEGWTNKF 291
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + L+ NF+ P+S ++M ++F G + + YQ A+ Y+F YGD L+
Sbjct: 292 IFPPYEFGLCNALIGNFYHPESPMMMTEASFAGYDLLYEGYQRALKEGYKFGCYGDALLM 351
>gi|296125826|ref|YP_003633078.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Brachyspira murdochii DSM 12563]
gi|296017642|gb|ADG70879.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Brachyspira murdochii DSM 12563]
Length = 358
Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 138/361 (38%), Positives = 202/361 (55%), Gaps = 21/361 (5%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
++F LP + IA P + RD RLM ++ N + + +D+ +LN +D +V N++K
Sbjct: 10 YNFYLPENLIATEPNYERDHCRLMTLNKNTG---ELEHKIFADIINYLNKDDVLVLNDSK 66
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILH--FFSQDGQ 123
VI A++ + N EI + ++W + K IK+ D L+ + D
Sbjct: 67 VIPARIYAKKSTGGN---AEILLLNKVNNDESTWECLIK-GKNIKEADTLYLDYAHLDNV 122
Query: 124 SRLEATVIDKWNTGEILLVFSISGIELERQI-SLVGTIPLPPYI--ARKR----PIDARD 176
+EA +I+K N L+ FS L I +G IPLPPYI +RKR ++ D
Sbjct: 123 GNIEA-LIEKDNISTKLIKFSKP---LTNDILDTIGKIPLPPYIIQSRKRKGEEEYNSND 178
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQ YAK +GS+A+PT+GLHFT+ LL ++ SIG+ V +VTLHVG TF P+K +D
Sbjct: 179 KEFYQNVYAKNEGSIASPTSGLHFTNELLDKIKSIGVTVCYVTLHVGFSTFNPLKEDDLR 238
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+HIMH E I + + + K G RIVS GTT R+LE+ ++ G TNIF
Sbjct: 239 NHIMHEEKFIIPKDSYDIIINAKKEGRRIVSCGTTVARVLESE-YDNYDFKRLEGSTNIF 297
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y+F+ VD L++NFH P STLL +VSAF G + Y+ A+ + YRF+SYGD +
Sbjct: 298 IYPPYKFKCVDALITNFHTPHSTLLAMVSAFAGYDNIMNAYKTAVDNNYRFFSYGDAMFI 357
Query: 357 F 357
+
Sbjct: 358 Y 358
>gi|325281821|ref|YP_004254363.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Odoribacter
splanchnicus DSM 20712]
gi|324313630|gb|ADY34183.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Odoribacter
splanchnicus DSM 20712]
Length = 349
Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 135/358 (37%), Positives = 185/358 (51%), Gaps = 12/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F + LPP IA P RD RLMVV I + D+ + + D V
Sbjct: 1 MKLSKFRYKLPPELIAQHPSANRDECRLMVVDRKTGT---IEHKVFKDVIDYFDEKDVFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKV A+L G + E E+ + W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK--EKTGAEIEVFLLRELNRDLRIWDVLVDPARKIRIGNKLYFGED 115
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDARDYV 178
D L A VID + L F G E ++ + +G PLP I RK ++ D
Sbjct: 116 DS---LVAEVIDNTTSRGRTLRFLFDGEYDEFKKLLYGLGETPLPRTITRK--VEPEDEE 170
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT +A+ +G+VAAPTAGLHF+ L+ R+ GI ++TLHVG G F V VED H
Sbjct: 171 RYQTIFARYEGAVAAPTAGLHFSRELMKRMEIKGIDFAYITLHVGLGNFREVDVEDLTKH 230
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
M SE + T + +N K +I +VGTT +R LE+ T G + + G+TN FI
Sbjct: 231 KMDSEQIIVGGDTVKIVNDAKDERHKICAVGTTVVRTLESCVTTKGRLTEYDGWTNKFIF 290
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
P Y F D +SNFHLP STLLM+V+AF G + K Y A+ YRF +YGD L+
Sbjct: 291 PPYDFSVPDAFISNFHLPYSTLLMMVAAFGGYDLVMKAYDLAVKEKYRFGTYGDAMLI 348
>gi|53711349|ref|YP_097341.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
fragilis YCH46]
gi|60679666|ref|YP_209810.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
fragilis NCTC 9343]
gi|253564545|ref|ZP_04842002.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 3_2_5]
gi|265764793|ref|ZP_06093068.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 2_1_16]
gi|81317260|sp|Q5LJ28|QUEA_BACFN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|81384013|sp|Q650L7|QUEA_BACFR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|52214214|dbj|BAD46807.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
fragilis YCH46]
gi|60491100|emb|CAH05848.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides fragilis NCTC 9343]
gi|251948321|gb|EES88603.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 3_2_5]
gi|263254177|gb|EEZ25611.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 2_1_16]
gi|301161131|emb|CBW20669.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides fragilis 638R]
Length = 352
Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 129/365 (35%), Positives = 192/365 (52%), Gaps = 19/365 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P RD +RLMV+H I + D+ + + D V
Sbjct: 1 MKLSQFKFKLPEEKIALHPTKYRDESRLMVLHKRTGE---IEHKMFKDILNYFDDKDVFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRRE----KEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
FN+TKV A+L G + R E +E++ L + W V P++ I+ G+ L+
Sbjct: 58 FNDTKVFPARLYGNKEKTGARIEVFLLRELNEELRL------WDVLVDPARKIRIGNKLY 111
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDA 174
F D + A VID + L F G E ++ + +G PLP I RP++
Sbjct: 112 FGDDDS---MVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYALGETPLPHTIL-NRPVEE 167
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D +Q+ +AK +G+V APTA LHF+ L+ R+ GI ++TLH G G F + VED
Sbjct: 168 EDAERFQSIFAKNEGAVTAPTASLHFSRELMKRMEIKGIDFAYITLHAGLGNFRDIDVED 227
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
H M SE F+ + +N K G + +VGTT +R +E+ + DG + + G+TN
Sbjct: 228 LTKHKMDSEQMFVTEEAVKIVNRAKDLGKNVCAVGTTVMRAIESTVSTDGHLKEYEGWTN 287
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
FI P Y F + ++SNFH+P STLLM+V+AF G ++ Y A+ YRF +YGD
Sbjct: 288 KFIFPPYDFTVANAMVSNFHMPLSTLLMIVAAFGGYDQVMDAYHIALKEGYRFGTYGDAM 347
Query: 355 LLFQK 359
L+ K
Sbjct: 348 LILDK 352
>gi|312891440|ref|ZP_07750957.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Mucilaginibacter paludis DSM 18603]
gi|311296134|gb|EFQ73286.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Mucilaginibacter paludis DSM 18603]
Length = 349
Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 132/363 (36%), Positives = 193/363 (53%), Gaps = 22/363 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP S +A P RD +RL+V+H + I + D+ + + D ++
Sbjct: 1 MKLSQFKFNLPESLVAHSPSENRDESRLLVLHRDSGK---IEHKIFKDVLNYFDDKDVMI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREK-----EISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
NNTKV A+L G +EK E+ + W V P++ I+ G+ L
Sbjct: 58 INNTKVFPARLYG-------NKEKTGATIEVFLLRELNKELRLWDVLVDPARKIRVGNKL 110
Query: 116 HFFSQDGQSRLEATVIDKWNTG--EILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
+F D L A V+D + I +F + E R + ++G PLP YI RK
Sbjct: 111 YFGDDD---LLIAEVVDNTTSRGRTIRFLFDGTDEEFRRNVEILGETPLPKYIKRKAT-- 165
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT +AK +G+VAAPTAGLHF+ L+ RL G++ VTLHVG GTF V+VE
Sbjct: 166 EEDKERYQTIFAKNEGAVAAPTAGLHFSRELMKRLELKGVEFAEVTLHVGLGTFRTVEVE 225
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
D H M SE I+ A +N RI +VGTTS+R +E+A + + + + +T
Sbjct: 226 DLTKHKMDSEQFIIEQKQADIVNRGIENKKRICAVGTTSMRTIESAVSANKTLKAANDWT 285
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+ FI P Y F + +++NFH P+STLLM++ AF G E Y+ A+ YRFYSYGD
Sbjct: 286 SKFIFPPYDFSIANSMITNFHTPESTLLMMICAFGGYENVMNAYEVAVKEKYRFYSYGDA 345
Query: 354 SLL 356
++
Sbjct: 346 MMI 348
>gi|134294796|ref|YP_001118531.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia vietnamiensis G4]
gi|166216711|sp|A4JBP3|QUEA_BURVG RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|134137953|gb|ABO53696.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Burkholderia vietnamiensis G4]
Length = 353
Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 145/369 (39%), Positives = 201/369 (54%), Gaps = 37/369 (10%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LPP IA + R ++RL+ V ++ P + D ++LP+ + D +VFN
Sbjct: 4 LSDFDFNLPPELIAQTALPERTASRLLEVDGTVA-PARLVDRRFAELPSCIARGDLLVFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKV+ A RF +I + ++ R SK G L
Sbjct: 63 DTKVLKA-----RFFGQKASGGKIEVLVERVTGTHTALAQIRASKSPGAGTTLRL----- 112
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ TV ++ L F + L I G +PLPPYI + DA D YQT
Sbjct: 113 ADAFDVTVGERVEPF-FTLHFPQPCLTL---IEQYGRLPLPPYI--EHDADATDETRYQT 166
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA G+VAAPTAGLHF LL +L ++G++ +TLHVGAGTF PV+VE+ +H MHS
Sbjct: 167 VYASNPGAVAAPTAGLHFDQPLLEKLDAMGVERATLTLHVGAGTFQPVRVENIAEHRMHS 226
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET------------ATTEDGIINPWS 290
E + + + ++RGG +++VGTTS+R LE A T+D
Sbjct: 227 EWYDLPQSLVDKIAATRARGGNVIAVGTTSMRALEAAARSAEAAGRPLAATQDE------ 280
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
T+IFITPGYRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI YRF+SY
Sbjct: 281 --TDIFITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIRAAYRHAIDERYRFFSY 338
Query: 351 GDTSLLFQK 359
GD LL ++
Sbjct: 339 GDAMLLTRR 347
>gi|257790735|ref|YP_003181341.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Eggerthella lenta DSM 2243]
gi|257474632|gb|ACV54952.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Eggerthella lenta DSM 2243]
Length = 361
Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 134/364 (36%), Positives = 190/364 (52%), Gaps = 20/364 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+DLPP IA P RD RL+V+ I D + D+ +L ND ++
Sbjct: 1 MKTSDFDYDLPPELIAQEPAAERDGCRLLVMDRATGA---IEDRIFRDIADYLRPNDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRRE----KEISCTLHMRVSPNSWSVYARPSKVIKKGD--I 114
N T+V+ A+L G + E +E+ W V RP K +K G +
Sbjct: 58 ANETRVMPARLLGAKRGTGGSAEVFLLREVRDREPRTNQSALWEVLVRPGKRLKPGTGAV 117
Query: 115 LHFFSQDGQSRLEATVIDKW----NTGEILLVFSISGIELERQISLVGTIPLPPYIARKR 170
+ F G+ L ++D W GE L + L+ + VG PLPPYI
Sbjct: 118 VDFVDARGEVALSTEIVD-WAENAQKGERLARLTTPLPSLDEALHAVGHTPLPPYIKNY- 175
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
A D YQT Y++ + S AAPTAGLHFT L+ RL G++ V L VG TF V
Sbjct: 176 ---AGDEELYQTVYSRRESSAAAPTAGLHFTPALIERLREQGVRWETVELEVGLDTFRIV 232
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPW 289
+D + H++H+E + TA A+ + RGGR+++VGTTS+R LE+A E G + P
Sbjct: 233 DEDDPEQHVIHTEYYTVPERTADAIAETRERGGRVIAVGTTSVRSLESAWDAEAGAVTPR 292
Query: 290 S-GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
T++++ PG +F VD L++NFH+P+STL+MLVSAF E Y+HAI YR
Sbjct: 293 DRETTSLYLLPGSQFHVVDALITNFHVPRSTLMMLVSAFSTREHIMAAYRHAIEERYRML 352
Query: 349 SYGD 352
S+GD
Sbjct: 353 SFGD 356
>gi|21672414|ref|NP_660481.1| S-adenosylmethionine:tRNA ribosyltransferase [Buchnera aphidicola
str. Sg (Schizaphis graminum)]
gi|25009009|sp|Q8KA10|QUEA_BUCAP RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|21623024|gb|AAM67692.1| S-adenosylmethionine:tRNA ribosyltransferase [Buchnera aphidicola
str. Sg (Schizaphis graminum)]
Length = 357
Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 139/356 (39%), Positives = 200/356 (56%), Gaps = 20/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F F +P S IA P F R +RL++++ + I+ ++ +NS D I+
Sbjct: 1 MHLSNFYFKIPKSLIAFYPCFIRSQSRLLIINGHTGK---IAHKFFFNILNEINSGDLII 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI A+L G + + + L ++ NS + S IK L FF +
Sbjct: 58 FNDTKVIPARLFGYK-----KSGGRVEVLLERILNKNSILASIKSSNEIKMNSYL-FFGK 111
Query: 121 DGQSRLEATVIDKWNTGEIL--LVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
++++++ +I N I+ L S I++ I G IPLPPYI KR + D
Sbjct: 112 --KNKIKSFIIGYKNPFYIIKFLHNKKSVIDIFNNI---GHIPLPPYI--KRFNEKIDSS 164
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y K GSVAAPTAGLHF LL L G+ + F+TLH+G+GTF P++ + H
Sbjct: 165 LYQTVYKKNLGSVAAPTAGLHFDLPLLEALSKKGVDIDFLTLHIGSGTFQPIRTAKIEKH 224
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINP--WSGFTNIF 296
IMHSE+ + + Q + K +GGRI++VGTT+LR LE+A + N + TNIF
Sbjct: 225 IMHSELVEVSSNLIQKIKLCKKKGGRIIAVGTTTLRALESAYHSNSWNNKKNYVKDTNIF 284
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
I PGY+ VD L++NFH P+STL+MLV +F G + T Y AI + YRF+SYGD
Sbjct: 285 IYPGYKHNVVDALITNFHFPESTLIMLVCSFLGYKNTMNAYHEAIKNNYRFFSYGD 340
>gi|237744129|ref|ZP_04574610.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. 7_1]
gi|229431358|gb|EEO41570.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. 7_1]
Length = 351
Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 136/360 (37%), Positives = 207/360 (57%), Gaps = 26/360 (7%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+ LP I +P PRDSA+LM+++ I ++ +L D +V N
Sbjct: 13 LNDYDYFLPEELIGQKPREPRDSAKLMLINRKTGS---IEHKHFYNIVDYLQKGDVLVRN 69
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHM----RVSPNSWSVYARPSKVIKKGDILHFF 118
TKVI A++ F H K+ L + R+S ++W +P+K +K G L+
Sbjct: 70 ATKVIPARI----FGH-----KDTGGVLEILLVKRISLDTWECLLKPAKKLKLGQKLYI- 119
Query: 119 SQDGQSR-LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
G+++ L A +++ G +L F G E + +G++PLPPYI RK ++ +D
Sbjct: 120 ---GENKELIAELLEIKEDGNRILKFYHEG-SFEEILDKLGSMPLPPYITRK--LENKD- 172
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YA+ SVAAPTAGLHFT LL +++ G+++ + L VG GTF PV+ + +
Sbjct: 173 -RYQTVYAQRGESVAAPTAGLHFTEELLKKILDKGVEIVDIFLEVGLGTFRPVQTVNVLE 231
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH E I A+ +N K+ G RI+SVGTT+ R LE++ E+G + T IFI
Sbjct: 232 HKMHEESFEISEKAAKIINEAKTEGRRIISVGTTATRALESSVDENGKLIAQKKDTGIFI 291
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+F+ VD L++NFHLPKSTLLMLVSAF E+ ++Y A+ Y F+S+GD+ ++
Sbjct: 292 YPGYKFKIVDALITNFHLPKSTLLMLVSAFYDREKMLEIYNLAVKEKYHFFSFGDSMFIY 351
>gi|260494286|ref|ZP_05814417.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. 3_1_33]
gi|260198432|gb|EEW95948.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. 3_1_33]
Length = 348
Score = 219 bits (558), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 136/358 (37%), Positives = 206/358 (57%), Gaps = 26/358 (7%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
++D+ LP I +P PRDSA+LM+++ I ++ +L D +V N T
Sbjct: 12 DYDYFLPEELIGQKPREPRDSAKLMLINRKTGS---IEHKHFYNIVDYLQKGDVLVRNAT 68
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHM----RVSPNSWSVYARPSKVIKKGDILHFFSQ 120
KVI A++ F H K+ L + R+S ++W +P+K +K G L+
Sbjct: 69 KVIPARI----FGH-----KDTGGVLEILLVKRISLDTWECLLKPAKKLKLGQKLYI--- 116
Query: 121 DGQSR-LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G+++ L A +++ G +L F G E + +G++PLPPYI RK ++ +D
Sbjct: 117 -GENKELIAELLEIKEDGNRILKFYHEG-SFEEILDKLGSMPLPPYITRK--LENKD--R 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ SVAAPTAGLHFT LL +++ G+++ + L VG GTF PV+ + +H
Sbjct: 171 YQTVYAQRGESVAAPTAGLHFTEELLKKILDKGVEIVDIFLEVGLGTFRPVQTVNVLEHK 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH E I A+ +N K+ G RI+SVGTT+ R LE++ E+G + T IFI P
Sbjct: 231 MHEESFEISEKAAKIINEAKTEGRRIISVGTTATRALESSVDENGKLIAQKKDTGIFIYP 290
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY+F+ VD L++NFHLPKSTLLMLVSAF E+ ++Y A+ Y F+S+GD+ ++
Sbjct: 291 GYKFKIVDALITNFHLPKSTLLMLVSAFYDREKMLEIYNLAVKEKYHFFSFGDSMFIY 348
>gi|256845602|ref|ZP_05551060.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. 3_1_36A2]
gi|256719161|gb|EEU32716.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. 3_1_36A2]
Length = 348
Score = 219 bits (558), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 136/358 (37%), Positives = 205/358 (57%), Gaps = 26/358 (7%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
++D+ LP I +P PRDSA+LM+++ I ++ +L D +V N T
Sbjct: 12 DYDYFLPEELIGQKPREPRDSAKLMLINRKTGS---IEHKNFYNIIDYLQKGDVLVRNAT 68
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHM----RVSPNSWSVYARPSKVIKKGDILHFFSQ 120
KVI A++ F H K+ L + R S ++W +P+K +K G L+
Sbjct: 69 KVIPARI----FGH-----KDTGGVLEILLIKRTSLDTWECLLKPAKKLKLGQKLYI--- 116
Query: 121 DGQSR-LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G+++ L A +++ G +L F G E + +G++PLPPYI RK ++ +D
Sbjct: 117 -GENKELIAELLEIKEDGNRILKFYYEG-SFEEILDKLGSMPLPPYITRK--LENKD--R 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ SVAAPTAGLHFT LL +++ G+ + + L VG GTF PV+ E+ +H
Sbjct: 171 YQTVYAQRGESVAAPTAGLHFTEELLKKILDKGVVIVDIFLEVGLGTFRPVQTENVLEHK 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH E I A+ +N K+ G RI+SVGTT+ R LE++ ++G + T IFI P
Sbjct: 231 MHEESFEISEKAAKIINEAKTEGRRIISVGTTATRALESSVDKNGKLIAQKKDTGIFIYP 290
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY+F+ VD L++NFHLPKSTLLMLVSAF E+ ++Y A+ Y F+S+GD+ ++
Sbjct: 291 GYKFKIVDALITNFHLPKSTLLMLVSAFYDREKMLEIYNLAVKEKYHFFSFGDSMFIY 348
>gi|262371662|ref|ZP_06064941.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter junii SH205]
gi|262311687|gb|EEY92772.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter junii SH205]
Length = 345
Score = 219 bits (558), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 138/359 (38%), Positives = 194/359 (54%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F FDLP IA P+ R ++RL+ + DH +D+ LN D +V
Sbjct: 1 MQLSDFSFDLPDELIARYPLESRSASRLLHIDDQGH----YHDHSFTDILDLLNEGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G R I + + ++ + + S K G L+
Sbjct: 57 LNDTKVMKARLKGKRAT-----GGAIEVLVERMLDTHTAHCHIKSSNSPKAGAELYI--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ + TV + E L V S L + G +P+PPY R+ + D Y
Sbjct: 109 -GEDSVPVTVQGRH---ENLFVVEFSQPILSI-LDQYGQLPIPPYFNRE--AEEIDTERY 161
Query: 181 QTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
QT + + SVAAPTA LHF +LL +L + G++ FVTLHVGAGTFMPV+ D +H
Sbjct: 162 QTVFHDPEKIASVAAPTASLHFDQDLLEKLAAKGVQKTFVTLHVGAGTFMPVRTTDITNH 221
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFI 297
IMHSE + T + K+RG ++++VGTT+ R LE+A DG I W+G T IFI
Sbjct: 222 IMHSEWCDVPQSTIDLILETKARGNKVIAVGTTATRALESAAQANDGKIAAWTGDTQIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+F VD L++NFHLP+STLLMLVSA + Y+HA+ YRF+SYGD L+
Sbjct: 282 YPGYQFCIVDRLITNFHLPESTLLMLVSALSNRDNILSAYEHAVKERYRFFSYGDAMLI 340
>gi|170691380|ref|ZP_02882545.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Burkholderia graminis C4D1M]
gi|170143585|gb|EDT11748.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Burkholderia graminis C4D1M]
Length = 352
Score = 219 bits (558), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 145/379 (38%), Positives = 200/379 (52%), Gaps = 54/379 (14%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVH--PNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +FDFDLPP IA + R ++RL+ V + + D ++LP + D +V
Sbjct: 4 LSDFDFDLPPELIAQVALPERSASRLLQVDNAADADRAARLIDRRFAELPDCIAPGDLLV 63
Query: 61 FNNTKVITAQLNGVRFCH------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
FN+TKV+ A+ G + + R E + +R S + +P I+ D
Sbjct: 64 FNDTKVLKARFLGQKASGGKIEVLVERLTGERTALAQIRASKSP-----QPGTTIRLADA 118
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
F R+E L F + L Q G +PLPPYI + D+
Sbjct: 119 ---FDVTVGERVEPFYT---------LHFPADCLTLIEQF---GRLPLPPYI--EHDPDS 161
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D YQT YA+ G+VAAPTAGLHF L +RL + G++ +TLHVGAGTF PV+VE+
Sbjct: 162 IDEARYQTVYAQNPGAVAAPTAGLHFDDALFARLDAHGVERATLTLHVGAGTFQPVRVEN 221
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSL--------------RLLETAT 280
+H MHSE + A + + K+RG R+++VGTTS+ R L +
Sbjct: 222 LAEHKMHSEWYHLPQSLADKIAATKARGNRVIAVGTTSMRALEAAARDAEAAGRPLAATS 281
Query: 281 TEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHA 340
TE T+IFITPGYRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HA
Sbjct: 282 TE----------TDIFITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIRAAYRHA 331
Query: 341 ISHAYRFYSYGDTSLLFQK 359
I YRF+SYGD LL ++
Sbjct: 332 IEQRYRFFSYGDAMLLTRR 350
>gi|320354867|ref|YP_004196206.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Desulfobulbus propionicus DSM 2032]
gi|320123369|gb|ADW18915.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Desulfobulbus propionicus DSM 2032]
Length = 367
Score = 219 bits (558), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 141/369 (38%), Positives = 204/369 (55%), Gaps = 28/369 (7%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
+D+DLPP RIA P RD +RL+V+ N+ P ++ +D+ L +D +V N+TK
Sbjct: 11 YDYDLPPERIAQFPEPQRDHSRLLVLDTNV--PELVHRRF-ADIVDHLRPSDLLVINSTK 67
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNS---------W-----SVYARPSKVIKK 111
V A+L G R+E L + P+S W + + SK K
Sbjct: 68 VFPARLLG-------RKETGGKVELFLLNFPHSPTTTDPTSSWHEATATALLKSSKRPKV 120
Query: 112 GDILHFFSQDGQSRLEATVIDKWNTGEILLVFSIS-GIELERQISLVGTIPLPPYIARKR 170
G L F + +R++A + D E+ L + + G L+ + G +PLPPYI R
Sbjct: 121 GGSL-LFDEQFHARVDALLGD--GKAEVTLRYRPAPGQSLQDLLERHGQMPLPPYIDRPN 177
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
D YQT YA GSVAAPTAGLHF+ LL+++ + + + + LHVG GTF PV
Sbjct: 178 GNVEEDLHRYQTRYASQVGSVAAPTAGLHFSDALLAQIRAKRVDIAPLVLHVGYGTFAPV 237
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWS 290
+ ED +H +H E I A TA +N K+ GGRI +VGTT++R LE A + G + P +
Sbjct: 238 RSEDIREHRIHREWVEIPAATAAKVNQTKAAGGRIWAVGTTTVRSLEFAADQHGQVQPGA 297
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
++FI PG++FR +D L++NFHLPKS+LL LVSA G + Y+ AI+ +YRF+SY
Sbjct: 298 SECDLFIYPGFQFRVIDNLITNFHLPKSSLLFLVSALAGRQRILAAYKEAIASSYRFFSY 357
Query: 351 GDTSLLFQK 359
GD + K
Sbjct: 358 GDAMAIVTK 366
>gi|192360885|ref|YP_001981943.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cellvibrio
japonicus Ueda107]
gi|190687050|gb|ACE84728.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cellvibrio
japonicus Ueda107]
Length = 364
Score = 219 bits (557), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 137/365 (37%), Positives = 195/365 (53%), Gaps = 29/365 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F ++LP IA P R +RL+ + + DL +N D +V
Sbjct: 5 MRRQDFYYELPDHLIARVPASERRGSRLLQLDGATGARV---HGQFPDLLDLVNPGDLMV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + + + +S + R SK K Q
Sbjct: 62 FNNTRVIPARLFGQKATG-----GAVEILVERVLSDKRVLAHTRASKAPKVDS--QVILQ 114
Query: 121 DGQS---RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
DG S R + +W + S +E+ QI G +PLPPYI R ++ R+
Sbjct: 115 DGTSVILRARQDALFEWE-----FLTDQSALEVMEQI---GHMPLPPYIDRADAVEDRER 166
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT Y + QG+VAAPTAGLHF +L +L G+++ FVTLHVGAGTF ++V++ +
Sbjct: 167 --YQTVYGEKQGAVAAPTAGLHFDELMLQQLRDKGVQIAFVTLHVGAGTFQNMRVDNIRE 224
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT------TEDGIINPWSG 291
H MH EI + + + + K+ G R+V+VGTTS+R LE+A G I P+ G
Sbjct: 225 HKMHGEIMEVSPEVCELVRATKAAGKRVVAVGTTSVRSLESAAHGYLDPVHKGSIQPYRG 284
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T+IFI PGY F+ VD L++NFHLP+STL+MLVSAF G T Y A++ YRF+SYG
Sbjct: 285 ETSIFIYPGYTFQVVDALVTNFHLPESTLIMLVSAFAGYSHTMAAYADAVARQYRFFSYG 344
Query: 352 DTSLL 356
D +
Sbjct: 345 DAMFI 349
>gi|255027786|ref|ZP_05299772.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL J2-003]
Length = 225
Score = 219 bits (557), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 113/225 (50%), Positives = 152/225 (67%), Gaps = 6/225 (2%)
Query: 129 TVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQ 188
T +++ G +L FS GI E + +G +PLPPYI + R YQT YAK
Sbjct: 1 TCLEELEHGGRILEFSYEGIFYEV-LEQLGEMPLPPYIKEQLADQDR----YQTVYAKEN 55
Query: 189 GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFID 248
GS AAPTAGLHFT +LL ++ + G+++ FVTLHVG GTF PV VEDT +H MHSE +
Sbjct: 56 GSAAAPTAGLHFTEDLLEQISAKGVEIIFVTLHVGLGTFRPVDVEDTTNHKMHSEFYRLT 115
Query: 249 APTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITPGYRFRAVD 307
+A+ +N +K++GG++V+VGTTS+R LET A+ DG + SG+T IFI+PGY F+AVD
Sbjct: 116 EESAERINKIKAQGGKVVAVGTTSIRTLETIASRHDGKLVAESGWTEIFISPGYTFQAVD 175
Query: 308 ILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD
Sbjct: 176 ALITNFHLPKSTLIMLVSALSDRTKILAAYNHAVEEQYRFFSFGD 220
>gi|33519694|ref|NP_878526.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Blochmannia floridanus]
gi|46576954|sp|Q7VQB2|QUEA_BLOFL RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|33517357|emb|CAD83742.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Blochmannia floridanus]
Length = 353
Score = 218 bits (556), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 131/359 (36%), Positives = 194/359 (54%), Gaps = 20/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F F LP I+ P R RL+V I+ H SDLP LN D ++
Sbjct: 1 MRTSDFKFQLPKKLISRYPNLKRSECRLLVFD---RLTTKITHHFFSDLPEILNPGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G K++ + ++ + S++++ G+ S
Sbjct: 58 FNDTRVIPARLYGYSVT-----GKKVEILIERILNDYQAVAHIYSSELVQLGEKFILGSN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISL---VGTIPLPPYIARKRPIDARDY 177
+ + +I I +SL +G IP+PPY R I DY
Sbjct: 113 LNIYIYVIKIYYSYKLFKIYF----DNINYNNVLSLLNDIGHIPIPPYFHRLDEII--DY 166
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT Y GS+AAPTAGLHF + L++RL+++GI++ F+TLH+G+ TF PV+V +
Sbjct: 167 ELYQTVYGSKLGSIAAPTAGLHFDTLLINRLLNLGIEISFITLHIGSATFQPVRVTLIEH 226
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA---TTEDGIINPWSGFTN 294
H+MH E + T +++ K R R+++VGTT ++ LETA T II +SG++
Sbjct: 227 HVMHDEYIEVSQSTIESILRCKERKNRVIAVGTTVVKALETAAMNTKSLSIIESFSGYSR 286
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFI PGYRF+ VD L++NFHLP+STL+MLV+AF G ++Y AI Y+F SYGD+
Sbjct: 287 IFIFPGYRFKIVDSLITNFHLPESTLIMLVAAFAGYRNILRVYNAAIDLNYKFLSYGDS 345
>gi|310814918|ref|YP_003962882.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Ketogulonicigenium vulgare Y25]
gi|308753653|gb|ADO41582.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Ketogulonicigenium vulgare Y25]
Length = 255
Score = 218 bits (556), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 123/256 (48%), Positives = 173/256 (67%), Gaps = 6/256 (2%)
Query: 104 RPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLP 163
+P + + +G+ + F SRL AT+I + + + L F+++G + + ++ G +PLP
Sbjct: 5 KPLRKLHEGEDIVF-----TSRLSATLIGR-DGDQAKLRFNLTGDDFDAALAEAGQMPLP 58
Query: 164 PYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVG 223
PYIA +R DA+D DYQT +A G+VAAPTA LHF + +++ L + G+ + VTLHVG
Sbjct: 59 PYIAARRAADAQDLQDYQTIWADRPGAVAAPTASLHFDAAVMAALAARGVTLTRVTLHVG 118
Query: 224 AGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED 283
AGTF+PVKV+D H MH+E G + A A + + K+ GGR++ VGTT+LRLLETA +
Sbjct: 119 AGTFLPVKVDDIAQHKMHAEWGEVTATAAAEIAATKAAGGRVIPVGTTALRLLETAARDT 178
Query: 284 GIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISH 343
G I PW G T+IFITPG+ FR D L++NFHLPKSTL+MLVS G + + +Y HAI+
Sbjct: 179 GAIAPWVGETDIFITPGFNFRVADGLVTNFHLPKSTLMMLVSGLMGADRIRAIYDHAIAQ 238
Query: 344 AYRFYSYGDTSLLFQK 359
YRF+SYGD SLL K
Sbjct: 239 RYRFFSYGDASLLLPK 254
>gi|78355089|ref|YP_386538.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Desulfovibrio desulfuricans subsp. desulfuricans str.
G20]
gi|91207423|sp|Q317N3|QUEA_DESDG RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|78217494|gb|ABB36843.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Desulfovibrio desulfuricans subsp. desulfuricans str.
G20]
Length = 380
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 140/363 (38%), Positives = 199/363 (54%), Gaps = 25/363 (6%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
+ F+LP +IA P R ++RL V+ V + D+ +FL +V NN++
Sbjct: 32 YRFELPEEQIAQHPPEHRGASRLFVMDRKSG---VNTQASFKDIGSFLPEGALLVANNSR 88
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWS---------VYARPSKVIKKGDILH 116
V+ A++ G R + + + T V P + + R SK ++ GD++H
Sbjct: 89 VLPARMLGRR--PTGGKVEFLLLTPLPLVQPQTGTDGRSCAEAEGLLRASKRVRPGDVMH 146
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
F DG L+ V+ + G + G +L G +PLPPYI +RP D
Sbjct: 147 F---DG---LDVEVLHTADFGRCAVRMHWKG-DLAGLFLRQGHLPLPPYI--RRPDGEDD 197
Query: 177 YVDYQTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
+ YQT Y++ GSVAAPTAGLHFT L + L G VTL+VG GTF PV+ ED
Sbjct: 198 HSRYQTVYSRQDRLGSVAAPTAGLHFTPELTASLQEQGFGWAEVTLYVGYGTFSPVRAED 257
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
H MH E I AQA+N K +G +V+VGTTS R+LE A G I P++G+T+
Sbjct: 258 IRTHTMHREYMEITEQAAQAINDAKRQGRPVVTVGTTSTRVLEGAWAACGEIRPFTGWTD 317
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PGYRF D +++NFHLP+S+LLM++SAF G E+T + Y A++ YRF+SYGD
Sbjct: 318 IFIYPGYRFNVADHIITNFHLPESSLLMMISAFAGREKTLQAYSQAVAAGYRFFSYGDAM 377
Query: 355 LLF 357
L+
Sbjct: 378 LIL 380
>gi|269216137|ref|ZP_06159991.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Slackia
exigua ATCC 700122]
gi|269130396|gb|EEZ61474.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Slackia
exigua ATCC 700122]
Length = 359
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 138/369 (37%), Positives = 191/369 (51%), Gaps = 24/369 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+DLP IA P RD+ RL+V+ ++D + D+ +LN D +V
Sbjct: 1 MRTDDFDYDLPERCIAQEPAPVRDACRLLVMDRETGA---LADRIFRDIEGYLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTL---HMRVSPNS-----WSVYARPSKVIKKG 112
N+T+V+ A+L G H E L V P + W V RP K +K G
Sbjct: 58 ANSTRVMPARLLG----HKRTTGGEAEVFLLRERFDVEPKADASAVWDVLVRPGKRLKPG 113
Query: 113 DILHFFSQDGQSRLEATVID---KWNTGEILLVFSISGIELERQISLVGTIPLPPYIARK 169
I+ F +G L A +ID + GE + S L+ + VG PLPPYI
Sbjct: 114 AIVDFVDGEGAVALSAEIIDWGLEGGKGERIARLSTERPSLDEALHAVGRTPLPPYIKHY 173
Query: 170 RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
A D YQT Y+ + S AAPTAGLHFT L+ RL + G+ V L VG TF
Sbjct: 174 ----AGDEEMYQTVYSHDEKSAAAPTAGLHFTPELIERLRAKGVAWKTVELEVGLDTFRI 229
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINP 288
V +D H MH+E + A ++ +RGGR+ +VGTTS+R LE+A E G ++
Sbjct: 230 VDEDDPTQHTMHTEHYTVSQEVVDACDACHARGGRVFAVGTTSVRSLESAFDRETGRLHA 289
Query: 289 WS-GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
T+++I PG+ F VD L++NFH+P+STL+MLVSAF E + Y+HAI YR
Sbjct: 290 RDHEATSLYILPGFEFGVVDGLITNFHVPRSTLMMLVSAFSTCENVRAAYRHAIESGYRM 349
Query: 348 YSYGDTSLL 356
S+GD L
Sbjct: 350 LSFGDAMLF 358
>gi|297517232|ref|ZP_06935618.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli OP50]
Length = 319
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 128/316 (40%), Positives = 185/316 (58%), Gaps = 22/316 (6%)
Query: 47 SDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPS 106
+DL LN D +VFNNT+VI A+L G + +I + + + R S
Sbjct: 7 TDLLDKLNPGDLLVFNNTRVIPARLFGRKASG-----GKIEVLVERMLDDKRILAHIRAS 61
Query: 107 KVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPL 162
K K G D +S + AT+ + +F + ER + + +G +PL
Sbjct: 62 KAPKPG--AELLLGDDES-INATMTARHGA-----LFEVE-FNDERSVLDILNSIGHMPL 112
Query: 163 PPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHV 222
PPYI RP + D YQT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHV
Sbjct: 113 PPYI--DRPDEDADRELYQTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHV 170
Query: 223 GAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--T 280
GAGTF PV+V+ +DHIMHSE + A+ + K+RG R+++VGTTS+R LE+A
Sbjct: 171 GAGTFQPVRVDTIEDHIMHSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQA 230
Query: 281 TEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHA 340
++ +I P+ T IFI PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A
Sbjct: 231 AKNDLIEPFFDDTQIFIYPGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAA 290
Query: 341 ISHAYRFYSYGDTSLL 356
+ YRF+SYGD +
Sbjct: 291 VEEKYRFFSYGDAMFI 306
>gi|120601094|ref|YP_965494.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Desulfovibrio vulgaris DP4]
gi|166216718|sp|A1V9F1|QUEA_DESVV RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|120561323|gb|ABM27067.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Desulfovibrio vulgaris DP4]
Length = 371
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 143/373 (38%), Positives = 195/373 (52%), Gaps = 29/373 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
++ +D++LP RIA P R +RL+V+ + +DL L +V
Sbjct: 10 FLLSGYDYELPEDRIAQHPPVERGLSRLLVLDRTTGERIHAR---FADLAEHLPEGALLV 66
Query: 61 FNNTKVITAQLNGVR----------FCHINRREKEISCTLHMRVSPNSWSVYA-----RP 105
NN+KV+ A+L G R + + V P W V R
Sbjct: 67 ANNSKVLPARLLGHRPTGGKVEFLLLTPLPLVTPLAAGPASGTVEPG-WCVAEVEGLLRA 125
Query: 106 SKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPY 165
SK ++ GD L F L V+ K G +++ G EL + G +PLPPY
Sbjct: 126 SKPLRPGDTLSFGDD-----LRVEVVHKGEFGRSMVLLFWRG-ELATLFAREGHLPLPPY 179
Query: 166 IARKRPIDARDYVDYQTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVG 223
I R + RD YQT +A+ GSVAAPTAGLHFT +L L + G + VTL+VG
Sbjct: 180 IRRADGDEDRDR--YQTVFAREDRLGSVAAPTAGLHFTPSLRETLTARGHQWAEVTLYVG 237
Query: 224 AGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED 283
GTF PV+ D DH MH E + A T +A+ K+ G +V+VGTTS R+LE T
Sbjct: 238 YGTFSPVRCADIRDHAMHREYVEVTAETVEAIRRAKADGRPVVAVGTTSCRVLEGVATAK 297
Query: 284 GIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISH 343
G + P++G+T+IF+ PGY F+ VD L++NFHLP+S+LLMLVSAF G E Y+ AI
Sbjct: 298 GTLEPYAGWTDIFMYPGYTFKVVDHLITNFHLPESSLLMLVSAFAGRERVLATYREAIEE 357
Query: 344 AYRFYSYGDTSLL 356
YRF+SYGD LL
Sbjct: 358 GYRFFSYGDAMLL 370
>gi|19704665|ref|NP_604227.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
gi|22096012|sp|Q8R620|QUEA_FUSNN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|19714973|gb|AAL95526.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
Length = 351
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 134/358 (37%), Positives = 206/358 (57%), Gaps = 26/358 (7%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
++D+ LP I +P PRDSA+LM++ + ++ +L D +V N T
Sbjct: 15 DYDYFLPEELIGQKPREPRDSAKLMLIDRKNGS---VEHKNFYNIIDYLQKGDILVRNAT 71
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHM----RVSPNSWSVYARPSKVIKKGDILHFFSQ 120
KVI A++ F H K+ L + R++ ++W +P+K +K G L+
Sbjct: 72 KVIPARI----FGH-----KDTGGVLEILLIKRITLDTWECLLKPAKKLKLGQKLYI--- 119
Query: 121 DGQSR-LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G+++ L A +++ G +L F G E + +G++PLPPYI RK ++ +D
Sbjct: 120 -GENKELIAELLEIKEDGNRILKFYYEG-SFEEILDKLGSMPLPPYITRK--LENKD--R 173
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ SVAAPTAGLHFT LL++++ G+++ + L VG GTF PV+ + +H
Sbjct: 174 YQTVYAQRGESVAAPTAGLHFTEELLNKILDKGVEIVDIFLEVGLGTFRPVQTVNVLEHK 233
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH E I A+ +N K+ G RI+SVGTT+ R LE++ E+G + T IFI P
Sbjct: 234 MHEESFEISEKVAKIINEAKAEGRRIISVGTTATRALESSVDENGKLIAQKKDTGIFIYP 293
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY+F+ VD L++NFHLPKSTLLMLVSAF E+ ++Y A+ Y F+S+GD+ ++
Sbjct: 294 GYKFKIVDALITNFHLPKSTLLMLVSAFYDREKMLEIYNLAVKEKYHFFSFGDSMFIY 351
>gi|212634512|ref|YP_002311037.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
piezotolerans WP3]
gi|226736743|sp|B8CLC4|QUEA_SHEPW RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|212555996|gb|ACJ28450.1| Queuosine biosynthesis protein [Shewanella piezotolerans WP3]
Length = 345
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 135/363 (37%), Positives = 199/363 (54%), Gaps = 24/363 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N ++D + + + D +V
Sbjct: 1 MRVADFSFELPDELIARYPTAERTASRLLSLDGNSGA---LADLQFTAILEKVQPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF--- 117
FNNT+VI A+L G + + ++ + + + R SK K +I+
Sbjct: 58 FNNTRVIPARLFGKK-----QSGGKLEILVERMLDDKRILAHVRCSKSPKVDNIICLDNG 112
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+ +R +A + + + +L + VG +PLPPYI RP + D
Sbjct: 113 YEMKMCARHDALFELELQSDKTIL----------EVLEEVGHMPLPPYI--DRPDEDADK 160
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT Y + G+VAAPTAGLHF +L+ L G+K FVTLHVGAGTF PV+V++ D
Sbjct: 161 ERYQTVYNQTPGAVAAPTAGLHFDDAMLAALKDKGVKTAFVTLHVGAGTFQPVRVDEILD 220
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLR-LLETATTEDGIINPWSGFTNIF 296
H MHSE + + K+ G R+++VGTTS+R L A + +SG T+IF
Sbjct: 221 HKMHSEWAEVSQDVVDLIALTKANGHRVIAVGTTSVRSLESAARASAAELEAFSGDTDIF 280
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+F+ VD +++NFHLP+STL+ML+SAF G +E K YQHAI+ YRF+SYGD +
Sbjct: 281 IYPGYQFQVVDAMVTNFHLPESTLIMLLSAFAGFDEVKTAYQHAIAQKYRFFSYGDAMFV 340
Query: 357 FQK 359
+K
Sbjct: 341 TKK 343
>gi|296327943|ref|ZP_06870478.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium nucleatum subsp. nucleatum ATCC 23726]
gi|296154899|gb|EFG95681.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium nucleatum subsp. nucleatum ATCC 23726]
Length = 343
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 134/358 (37%), Positives = 206/358 (57%), Gaps = 26/358 (7%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
++D+ LP I +P PRDSA+LM++ + ++ +L D +V N T
Sbjct: 7 DYDYFLPEELIGQKPREPRDSAKLMLIDRKNGS---VEHKNFYNIIDYLQKGDVLVRNAT 63
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHM----RVSPNSWSVYARPSKVIKKGDILHFFSQ 120
KVI A++ F H K+ L + R++ ++W +P+K +K G L+
Sbjct: 64 KVIPARI----FGH-----KDTGGVLEILLIKRITLDTWECLLKPAKKLKLGQKLYI--- 111
Query: 121 DGQSR-LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G+++ L A +++ G +L F G E + +G++PLPPYI RK ++ +D
Sbjct: 112 -GENKELIAELLEIKEDGNRILKFYYEG-SFEEILDKLGSMPLPPYITRK--LENKD--R 165
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ SVAAPTAGLHFT LL++++ G+++ + L VG GTF PV+ + +H
Sbjct: 166 YQTVYAQRGESVAAPTAGLHFTEELLNKILDKGVEIVDIFLEVGLGTFRPVQTVNVLEHK 225
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH E I A+ +N K+ G RI+SVGTT+ R LE++ E+G + T IFI P
Sbjct: 226 MHEESFEISEKVAKIINEAKAEGRRIISVGTTATRALESSVDENGKLIAQKKDTGIFIYP 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY+F+ VD L++NFHLPKSTLLMLVSAF E+ ++Y A+ Y F+S+GD+ ++
Sbjct: 286 GYKFKIVDALITNFHLPKSTLLMLVSAFYDREKMLEIYNLAVKEKYHFFSFGDSMFIY 343
>gi|254302820|ref|ZP_04970178.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
[Fusobacterium nucleatum subsp. polymorphum ATCC 10953]
gi|148323012|gb|EDK88262.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
[Fusobacterium nucleatum subsp. polymorphum ATCC 10953]
Length = 343
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 135/358 (37%), Positives = 204/358 (56%), Gaps = 26/358 (7%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
++D+ LP I RP PRDSA+LM++ + ++ +L D +V N T
Sbjct: 7 DYDYFLPEELIGQRPREPRDSAKLMLIDRKNES---VEHKKFYNIIDYLQKGDVLVRNAT 63
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHM----RVSPNSWSVYARPSKVIKKGDILHFFSQ 120
KVI A++ F H K+ L + R++ ++W +P+K +K G L+
Sbjct: 64 KVIPARI----FGH-----KDTGGVLEILLIKRITLDTWECLLKPAKKLKLGQKLYI--- 111
Query: 121 DGQSR-LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G+++ L A +++ G +L F G E + +G++PLPPYI K ++ +D
Sbjct: 112 -GENKELIAELLEIKEDGNRILKFYHEG-SFEEILDKLGSMPLPPYITSK--LENKD--R 165
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ SVAAPTAGLHFT LL +++ G+ + + L VG GTF PV+ E+ +H
Sbjct: 166 YQTVYAQRGESVAAPTAGLHFTEELLKKILDKGVVIVDIFLEVGLGTFRPVQTENVLEHK 225
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH E I A+ +N K+ G RI+SVGTT+ R LE++ E+G + T IFI P
Sbjct: 226 MHEESFEISEKVAKIINEAKAEGRRIISVGTTATRALESSVDENGKLIAQKKDTGIFIYP 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY+F+ VD L++NFHLPKSTLLMLVSAF E+ ++Y A+ Y F+S+GD+ ++
Sbjct: 286 GYKFKIVDALITNFHLPKSTLLMLVSAFYDREKMLEIYNLAVKEKYHFFSFGDSMFIY 343
>gi|167586186|ref|ZP_02378574.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia ubonensis Bu]
Length = 354
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 143/370 (38%), Positives = 202/370 (54%), Gaps = 35/370 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FDF LPP IA + R ++RL+ V N P + D ++LP+ + + D +V
Sbjct: 2 LTLSDFDFHLPPELIAQTALPDRTASRLLEVD-NTVAPARLVDRRFAELPSCIAAGDLLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKV+ A RF ++ + ++ R SK G L
Sbjct: 61 FNDTKVLKA-----RFFGHKASGGKVEVLIERVTGTHTALAQIRASKSPGPGTTL----- 110
Query: 121 DGQSRLEATVIDKWNT--GE-----ILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
T+ D ++ GE L F + L I G +PLPPYI + D
Sbjct: 111 --------TLADAFDVTVGERVEPFFTLHFPAPCLTL---IEQYGRLPLPPYI--EHDPD 157
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
A D YQT YA G+VAAPTAGLHF LL++L ++G++ +TLHVGAGTF PV+V+
Sbjct: 158 ATDETRYQTVYASNPGAVAAPTAGLHFDEPLLAKLDAMGVERATLTLHVGAGTFQPVRVD 217
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI----INPW 289
+ +H MHSE + + + ++RGG +++VGTTS+R LE A + +
Sbjct: 218 NLAEHKMHSEWYELPQSLVDRIAATRARGGNVIAVGTTSMRALEAAARDADAAGRPLAAT 277
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
T+IFITPGY FR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI YRF+S
Sbjct: 278 QAETDIFITPGYAFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIRAAYRHAIDERYRFFS 337
Query: 350 YGDTSLLFQK 359
YGD LL ++
Sbjct: 338 YGDAMLLTRR 347
>gi|124007246|ref|ZP_01691954.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Microscilla
marina ATCC 23134]
gi|123987276|gb|EAY27005.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Microscilla
marina ATCC 23134]
Length = 350
Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 130/359 (36%), Positives = 190/359 (52%), Gaps = 11/359 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EF FD P +AL P RD +RLMV+H + I + D+ + + D V
Sbjct: 1 MKLSEFKFDFPTDLLALHPTDNRDESRLMVIHRDSGK---IEHKVFKDIVDYFDEGDVFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV A+L G + + E+ + + W V P++ I+ G+ L F
Sbjct: 58 VNDTKVFPARLFGSK--EKTGAQIEVFLLRELNQEAHLWDVLVDPARKIRVGNKLFF--- 112
Query: 121 DGQSRLEATVIDKWNTG--EILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
G L A VID + I + S E + I +G PLP +I ++R DA D
Sbjct: 113 -GNGELVAEVIDNTTSRGRTIRFLTDRSDEEFYQLIDELGETPLPKHIYQQRKTDAHDRE 171
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
+QT +A+ G+VAAPTAGLHFT L+ RL GI + VTLH+G GTF V VED H
Sbjct: 172 RFQTIFAEHVGAVAAPTAGLHFTKQLIKRLELKGIDMTPVTLHIGLGTFRDVDVEDLTKH 231
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
SE + A T +N + R+ ++GTT ++ LE++ + + ++ +G+++ FI
Sbjct: 232 KADSENFSVPANTTDKVNDALANKKRVCAIGTTVVKALESSVSANSLLKENAGWSDKFIF 291
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
P Y F+ + L++NFHLP+STLLM AF G E YQ A+ YRF+SYGD L+
Sbjct: 292 PPYEFKIPNALVTNFHLPESTLLMTACAFGGYELIMDAYQVAVKEKYRFFSYGDAMLIL 350
>gi|268316657|ref|YP_003290376.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Rhodothermus marinus DSM 4252]
gi|262334191|gb|ACY47988.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Rhodothermus marinus DSM 4252]
Length = 348
Score = 216 bits (550), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 141/365 (38%), Positives = 200/365 (54%), Gaps = 25/365 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + + +D P S +A P PRDSARLMV+ I + D+ + N D +V
Sbjct: 1 MRLSDLHYDYPKSLVAKYPAEPRDSARLMVLDRKRRT---IEHRIFRDIVDYFNEGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREK-----EISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
NNTKV A+L G R+EK E+ + W P++ I+ G+ +
Sbjct: 58 VNNTKVFPARLYG-------RKEKTGAKIEVLLLRELNAESRLWDALVDPARKIRVGNKI 110
Query: 116 HFFSQDGQSRLEATVIDKWNTG--EILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
+F DG L A VID + I +F S EL ++I VG +PLPPYI KR +
Sbjct: 111 YF---DGG--LVAEVIDNTTSRGRTIRFLFDGSDEELYQKIEEVGHMPLPPYI--KREDE 163
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT +A+ GSVAAPTAGLHFT L+ RL G+ + +TLHVG GTF P++VE
Sbjct: 164 PEDRERYQTIFAQETGSVAAPTAGLHFTPELVERLKQKGVDIVPITLHVGLGTFRPIEVE 223
Query: 234 DTDDHIMHSEIGFIDAPTAQALN-SVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
D H M SE I A+ +N ++ S + +VGTT +R LE++ + G + P G+
Sbjct: 224 DLTKHRMDSEYFTITEEAAERINRALLSPEHTVTAVGTTVVRALESSISATGTVKPGFGW 283
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+ FI P Y F+ V+ L++NFH+P+STLL LV AF G + + Y+ A+ YR +S+GD
Sbjct: 284 TDKFIYPPYDFKIVERLITNFHMPRSTLLALVVAFAGYDFVMEAYRTAVQEKYRLFSFGD 343
Query: 353 TSLLF 357
L+
Sbjct: 344 AMLIL 348
>gi|162447237|ref|YP_001620369.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acholeplasma laidlawii PG-8A]
gi|161985344|gb|ABX80993.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acholeplasma laidlawii PG-8A]
Length = 282
Score = 216 bits (550), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 125/295 (42%), Positives = 176/295 (59%), Gaps = 15/295 (5%)
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNTKVI A+L G + I L + N+W +P+K IK G ++ F D
Sbjct: 2 NNTKVIPARLIGEKI----DTHAVIEVLLLKELEKNTWEALTKPAKKIKIGTVVSF--GD 55
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G ++E I + G + GI LE + +GT+PLPPYI K +R YQ
Sbjct: 56 GALKMECIGIK--DEGIRIFKAIYEGIFLE-VLDALGTMPLPPYITEKLEDKSR----YQ 108
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YAK GS AAPTAGLHFT LL ++ + G++V +TLHVG GTF PV+V+D +H MH
Sbjct: 109 TVYAKYAGSAAAPTAGLHFTKELLEKIKAKGVQVLEITLHVGLGTFRPVQVDDVLEHQMH 168
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E I+ TA+ LN K G RI++VGTT++R LE+ + +S TNIFI PGY
Sbjct: 169 YESYEINEETARLLNQYKKEGKRIIAVGTTTVRTLESNYNDGFHAGNYS--TNIFIYPGY 226
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+F+ + +++NFHLPKSTL+ML+SAF E+ ++Y+ A+ YRF+S+GD+ +
Sbjct: 227 QFKIIGAIITNFHLPKSTLIMLISAFYNREKVLEVYEDAVKKNYRFFSFGDSMFI 281
>gi|37523156|ref|NP_926533.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Gloeobacter
violaceus PCC 7421]
gi|46576918|sp|Q7NFD9|QUEA_GLOVI RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|35214159|dbj|BAC91528.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Gloeobacter
violaceus PCC 7421]
Length = 352
Score = 216 bits (549), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 139/357 (38%), Positives = 191/357 (53%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +D+ LP IA +P PRD +RL+VV + DLP L D +V
Sbjct: 10 FLTDSYDYALPERCIAQQPAEPRDHSRLLVVDGEAH-----THRYFYDLPGLLRPGDLLV 64
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G + + L +P W +P++ + G + F
Sbjct: 65 LNDTRVIPARLFGSKASG-----GRVEVLLLEPRAPREWLCLVKPARRLAVGARIDF--- 116
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DG T +D TG L F + E + VG PLPPY+ R D R Y
Sbjct: 117 DGVLAARVTELDA-ETGGRWLRFE-GEEDFEAALERVGHTPLPPYLKTGRTRDER----Y 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A G+VAAPTAGLHF+ LL+RL GI+ VTLHVG GTF PV+ H M
Sbjct: 171 QTLWASRPGAVAAPTAGLHFSGELLARLAERGIERATVTLHVGLGTFRPVQSVSVHTHRM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I TA A+ +SRGGR+++VGTTS R LE+A +G+ G + +F+ PG
Sbjct: 231 HREWYEIPEATAIAIERTRSRGGRVLAVGTTSARALESAAQPNGLPATGPGRSELFVYPG 290
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YR+R V+ L++NFHLP+S+LLMLVS+ G E +Y+ A+ YRFYS+GD L+
Sbjct: 291 YRWRVVEGLITNFHLPRSSLLMLVSSLVGRERLLALYREAVDKGYRFYSFGDAMLIL 347
>gi|160902969|ref|YP_001568550.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Petrotoga
mobilis SJ95]
gi|160360613|gb|ABX32227.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Petrotoga
mobilis SJ95]
Length = 341
Score = 216 bits (549), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 130/361 (36%), Positives = 195/361 (54%), Gaps = 35/361 (9%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+++++++LP IA PV PRDS +LMV++ + I + D+ +L D +V N
Sbjct: 8 LEQYNYELPEELIAQEPVEPRDSCKLMVLNRRVKS---IEHKVFRDIKNYLRPGDLLVLN 64
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRV-----SPNSWSVYARPSKVIKKGDILHF 117
NT+VI A+L G +KE + + + + +W +P IKKG+ L F
Sbjct: 65 NTRVIPARLYG---------KKETGAKVEVLLLEKDGNDKTWKALVKPGGKIKKGNKLIF 115
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+ L TV++ G +L F ++ +G +PLPPYI K+ ID D
Sbjct: 116 -----EDDLVCTVVEHLEDGSRILEFDDPN--FFSKLPKIGEVPLPPYI--KKQID--DP 164
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQTTYAK G+VAAPTAGLHFT L+ L G++ VTLHVG GTF PV D +
Sbjct: 165 EKYQTTYAKEDGAVAAPTAGLHFTQELIDELTDYGVRFAEVTLHVGLGTFRPVSAADIRN 224
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINP--WSGFTNI 295
H +H E + + + K+ G R+++ GTT +R LE+ NP +G T++
Sbjct: 225 HQIHEEYYTVSKSVLRDIVRAKAEGKRVIATGTTVVRTLESIAR-----NPDKLAGKTDL 279
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
+I P + F+ +D +++NFHLPKS+LL LVSAF G + Y+ A YRF+S+GD
Sbjct: 280 YIYPPFEFKIIDAMITNFHLPKSSLLFLVSAFAGQDFIMNSYEIAKEKKYRFFSFGDAMF 339
Query: 356 L 356
+
Sbjct: 340 I 340
>gi|297181292|gb|ADI17484.1| s-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [uncultured beta proteobacterium
HF0130_04F21]
Length = 364
Score = 216 bits (549), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 133/363 (36%), Positives = 199/363 (54%), Gaps = 20/363 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+++FD++LP + IA P R +RL+ V + L + DL + L +D ++FN
Sbjct: 7 LEDFDYELPDNLIAQYPAKTRSESRLLNVDLSDKKNLNFEELSFVDLASKLKKDDLLIFN 66
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS---WSVYARPSKVIKKGDILHFFS 119
N++VI A+LN V+ EI T ++ + + +PSK I G L
Sbjct: 67 NSRVIPAKLNCVKSTG---GSVEILITNKLQTEKENIFLCNAMLKPSKKIFLGQKLKI-- 121
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G S T+I+ E V ++ + G +PLPPYI KR + +DY D
Sbjct: 122 -KGSSET-LTIIENNLKSENNFVIEFKN-PIDHILKNFGIVPLPPYI--KRHPEKQDYTD 176
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQ +A GS+A PTAGLHF + + +L G+K FVTLHVG GTF P++V D H
Sbjct: 177 YQNIFATTPGSIAVPTAGLHFDNLVFKKLAEKGVKYEFVTLHVGIGTFQPIRVVDISRHE 236
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-------GIINPWSGF 292
MHSE + A+A+N RI++VGTTSLR+LE+ + + ++P S
Sbjct: 237 MHSEFCSVSNNCAKAINKATRENRRIIAVGTTSLRVLESLASIEIQEKSHIKSVSPRSWR 296
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
TN+F+ PG++F+ V L++NFHLPKSTLL+LVS F G E ++Y+ AI ++F+S+GD
Sbjct: 297 TNLFVKPGFKFQMVSGLITNFHLPKSTLLILVSTFLGHETCMRVYKEAIKKEFKFFSFGD 356
Query: 353 TSL 355
+
Sbjct: 357 AMM 359
>gi|226946087|ref|YP_002801160.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Azotobacter
vinelandii DJ]
gi|259551438|sp|C1DE77|QUEA_AZOVD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|226721014|gb|ACO80185.1| Queuosine biosynthesis protein: S-adenosylmethionine tRNA
ribosyltransferase [Azotobacter vinelandii DJ]
Length = 349
Score = 215 bits (548), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 145/356 (40%), Positives = 199/356 (55%), Gaps = 20/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R ++RL+V+ + +DL L D +V
Sbjct: 1 MRVADFHFELPESLIARHPLAERRASRLLVLD---GVTGDLQHRRFADLLDHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGWKAS-----GGKLEILVERVLDDERVLAHVRASKSPKAGSRI-LIEG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G++++ A + L F + L + VG +PLPPYI RP +A D Y
Sbjct: 112 GGEAQMLAR-----HDALFELRFDQRVLPL---LERVGHMPLPPYI--DRPDEAADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA G+VAAPTAGLHF LL+ + + FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAARAGAVAAPTAGLHFDEALLAAIGEKDVATAFVTLHVGAGTFQPVRVERIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A+ + ++RGGR+V+VGTTS+R LE+A DG++ P+SG T+IFI PG
Sbjct: 222 HREWLEVGQEVVDAVAACRARGGRVVAVGTTSVRSLESA-ARDGVLRPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
F VD L++NFHLP+STLLMLVSAF G ET Y A++ YRF+SYGD +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAVAQGYRFFSYGDAMFI 336
>gi|46581752|ref|YP_012560.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Desulfovibrio vulgaris str. Hildenborough]
gi|81566078|sp|Q725S3|QUEA_DESVH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|46451175|gb|AAS97820.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Desulfovibrio vulgaris str. Hildenborough]
gi|311235379|gb|ADP88233.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfovibrio vulgaris RCH1]
Length = 371
Score = 215 bits (548), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 142/372 (38%), Positives = 194/372 (52%), Gaps = 29/372 (7%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D++LP RIA P R +RL+V+ + +DL L +V
Sbjct: 11 LLSGYDYELPEDRIAQHPPVERGLSRLLVLDRTTGERIHAR---FADLAEHLPEGALLVA 67
Query: 62 NNTKVITAQLNGVR----------FCHINRREKEISCTLHMRVSPNSWSVYA-----RPS 106
NN+KV+ A+L G R + + V P W V R S
Sbjct: 68 NNSKVLPARLLGHRPTGGKVEFLLLTPLPLVTPLAAGPASGTVEPG-WCVAEVEGLLRAS 126
Query: 107 KVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYI 166
K ++ GD L F L V+ K G +++ G EL + G +PLPPYI
Sbjct: 127 KPLRPGDTLSFGDD-----LRVEVVHKGEFGRSMVLLFWRG-ELATLFAREGHLPLPPYI 180
Query: 167 ARKRPIDARDYVDYQTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
R + RD YQT +A+ GSVAAPTAGLHFT +L L + G + VTL+VG
Sbjct: 181 RRADGDEDRDR--YQTVFAREDRLGSVAAPTAGLHFTPSLRETLTARGHQWAEVTLYVGY 238
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDG 284
GTF PV+ D DH MH E + A T + + K+ G +V+VGTTS R+LE T G
Sbjct: 239 GTFSPVRCADIRDHAMHREYVEVTAETVEVIRRAKADGRPVVAVGTTSCRVLEGVATAKG 298
Query: 285 IINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHA 344
+ P++G+T+IF+ PGY F+ VD L++NFHLP+S+LLMLVSAF G E Y+ AI
Sbjct: 299 TLEPYAGWTDIFMYPGYTFKVVDHLITNFHLPESSLLMLVSAFAGRERVLATYREAIEEG 358
Query: 345 YRFYSYGDTSLL 356
YRF+SYGD LL
Sbjct: 359 YRFFSYGDAMLL 370
>gi|121603236|ref|YP_980565.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Polaromonas naphthalenivorans CJ2]
gi|120592205|gb|ABM35644.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Polaromonas naphthalenivorans CJ2]
Length = 352
Score = 215 bits (548), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 150/360 (41%), Positives = 200/360 (55%), Gaps = 22/360 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF LP IA P R ++RL+ + I+D +DLP L D +VFN
Sbjct: 7 LSDFDFTLPDELIAQHPAAERSASRLLDGRGD-----AIADRRFADLPDLLLPGDLLVFN 61
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFFSQ 120
+TKV+ A+L G + R E I L SP ++ A KV KK
Sbjct: 62 DTKVVKARLFGQKLSG-GRLELLIERVL----SPHLDAGHEVAAHMKVSKKPLPGAMLQM 116
Query: 121 DGQSRLEATVIDKWNTGE-ILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
DG AT++ +W L F +S + ++ G +PLPPYI D D
Sbjct: 117 DGG--FTATLLGRWPEAHGPLYRFRLSS-DPYALMAQHGHVPLPPYITHTDSAD--DEQR 171
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +AK G+VAAPTA LHF +L +L + GI VTLHVGAGTF PVK E +H
Sbjct: 172 YQTVFAKNPGAVAAPTAALHFDEAMLEKLQARGIARASVTLHVGAGTFQPVKTETIAEHH 231
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH E + T +A+ + K+RGGR+V+VGTT++R LE+A P TNIFITP
Sbjct: 232 MHFERFDVPQATHEAIAACKARGGRVVAVGTTTVRALESAAK----FGPDCCDTNIFITP 287
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
G+ F+ VD+L++NFHLPKSTL+MLVSAF G +Y+HAI YRF+SYGD LL ++
Sbjct: 288 GFDFKVVDVLLTNFHLPKSTLMMLVSAFSGHGHIMALYRHAIEARYRFFSYGDAMLLARQ 347
>gi|212704033|ref|ZP_03312161.1| hypothetical protein DESPIG_02086 [Desulfovibrio piger ATCC 29098]
gi|212672538|gb|EEB33021.1| hypothetical protein DESPIG_02086 [Desulfovibrio piger ATCC 29098]
Length = 370
Score = 215 bits (548), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 133/368 (36%), Positives = 201/368 (54%), Gaps = 23/368 (6%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+++ + +DLP +IA P R ++RL+ + N + L + H+ SDLP L +V
Sbjct: 12 LLQNYTYDLPQEQIAQYPPEQRGASRLLTMRRNGA--LDLEHHMFSDLPDCLPEGALLVA 69
Query: 62 NNTKVITAQLNGVR-------FCHINRREKEISCTLHMRVSPNSWSV----YARPSKVIK 110
NN++V+ A+L G R F + + ++ ++WS R ++
Sbjct: 70 NNSRVLQARLLGSRSTGGKVEFLLLTPLPLVRAAATPVKGREDTWSAEVNGLVRSGGSVR 129
Query: 111 KGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKR 170
+G+ LHF + + T+++ G + G ++ + G IPLPPYI KR
Sbjct: 130 EGETLHF-----GAGISVTILECGTFGHRRVRMCWKG-DVADAFAATGHIPLPPYI--KR 181
Query: 171 PIDARDYVDYQTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFM 228
D+ YQT Y++ + GSVAAPTAGLHFT L L G + VTL+VG GTF
Sbjct: 182 SDAEEDFSRYQTIYSREEKTGSVAAPTAGLHFTDELRETLRRRGFQWAEVTLYVGYGTFS 241
Query: 229 PVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINP 288
PV+ ED +H MH E + TA A+ K++ +++VGTTS+R LE G P
Sbjct: 242 PVRCEDIRNHQMHREYVELPEETANAIAEAKAQHRPVIAVGTTSVRTLEGVAQVCGRAQP 301
Query: 289 WSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
++G+T+IF+ PG FR VD +++NFHLP+S+LLMLVSAF G + + YQ A+ YRF+
Sbjct: 302 FAGWTDIFLYPGRPFRVVDGIITNFHLPESSLLMLVSAFAGRKRILEAYQEAVKKGYRFF 361
Query: 349 SYGDTSLL 356
SYGD L+
Sbjct: 362 SYGDAMLI 369
>gi|294785109|ref|ZP_06750397.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. 3_1_27]
gi|294486823|gb|EFG34185.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. 3_1_27]
Length = 348
Score = 215 bits (547), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 135/358 (37%), Positives = 203/358 (56%), Gaps = 26/358 (7%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
++D+ LP I +P PRDSA+LM++ I ++ +L D +V N T
Sbjct: 12 DYDYFLPEELIGQKPREPRDSAKLMLIDRKTGS---IEHKHFYNIVDYLQKGDVLVRNAT 68
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHM----RVSPNSWSVYARPSKVIKKGDILHFFSQ 120
KVI A++ F H K+ L + R S ++W +P+K +K G L+
Sbjct: 69 KVIPARI----FGH-----KDTGGVLEILLIKRTSLDTWECLLKPAKKLKLGQKLYI--- 116
Query: 121 DGQSR-LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G+++ L A +++ G +L F G E + +G++PLPPYI RK ++ +D
Sbjct: 117 -GENKELIAELLEIKEDGNRILKFYYEG-SFEEILDKLGSMPLPPYITRK--LENKD--R 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ SVAAPTAGLHFT LL +++ G+ + + L VG GTF PV+ + +H
Sbjct: 171 YQTVYAQRGESVAAPTAGLHFTEELLKKILDKGVVIVDIFLEVGLGTFRPVQTVNVLEHK 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH E I A+ +N K+ G RI+SVGTT+ R LE++ ++G + T IFI P
Sbjct: 231 MHEESFEISEKAAKIINEAKTEGRRIISVGTTATRALESSVDKNGKLIAQKKDTGIFIYP 290
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY+F+ VD L++NFHLPKSTLLMLVSAF E+ ++Y A+ Y F+S+GD+ ++
Sbjct: 291 GYKFKIVDALITNFHLPKSTLLMLVSAFYDREKMLEIYNLAVKEKYHFFSFGDSMFIY 348
>gi|160872276|ref|ZP_02062408.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rickettsiella grylli]
gi|159121075|gb|EDP46413.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rickettsiella grylli]
Length = 350
Score = 215 bits (547), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 122/349 (34%), Positives = 192/349 (55%), Gaps = 16/349 (4%)
Query: 4 KEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNN 63
++F ++LP IA P R +RL+ ++ V+ D+ F+N D +V NN
Sbjct: 13 EDFFYELPEKLIAHYPTEQRTDSRLLCLNKTTG---VMQHKKFKDILDFINPGDLLVLNN 69
Query: 64 TKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQ 123
T+VI A+L + ++ + + + SK +++G L +
Sbjct: 70 TQVIPARLFAKKITG-----GKVEILIERILERQRILAQLKSSKSLQRGTRLIL-----E 119
Query: 124 SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTT 183
+ + ++++ T L+ + + ++ +G IPLPPYI +R + D YQT
Sbjct: 120 NEMHVEIVNRTETMYELVFLIEPNLSILELLNQIGHIPLPPYI--QRADELFDGERYQTV 177
Query: 184 YAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSE 243
+A + G++AAPTAGLHF +LL+ L + G+ + ++TLHVGAGTF P++ + +DH MH E
Sbjct: 178 FASVPGAIAAPTAGLHFDEDLLTELKTKGVHIAYITLHVGAGTFQPIRSDRLEDHRMHHE 237
Query: 244 IGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRF 303
+ + + K RI++VGTT +R LETA + G INP +G TN+FI PG+ F
Sbjct: 238 YVTVSKTVCEQIIRAKQLNKRIIAVGTTVVRSLETAALQ-GQINPLAGETNLFIYPGFNF 296
Query: 304 RAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+D L++NFHLP+STLLMLV A G E + YQ A+ YRF+SYGD
Sbjct: 297 HCIDALITNFHLPRSTLLMLVCALGGYELIMQAYQEAVFQGYRFFSYGD 345
>gi|330997201|ref|ZP_08321054.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Paraprevotella xylaniphila YIT 11841]
gi|329570996|gb|EGG52703.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Paraprevotella xylaniphila YIT 11841]
Length = 353
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 128/364 (35%), Positives = 193/364 (53%), Gaps = 18/364 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IA P RD +RLMV+H + D+ + + D +
Sbjct: 1 MKLSQFKFKLPEEQIAQYPARHRDESRLMVLHKKSGD--IEHREYFKDILDYFDDKDVFI 58
Query: 61 FNNTKVITAQLNGVRFCHINRRE----KEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
FN+TKV A+L G + R E +E++ L + W V P++ I+ G+ L+
Sbjct: 59 FNDTKVFPARLYGNKEKTGARIEVFLLRELNEDLRL------WDVLVDPARKIRIGNKLY 112
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISL--VGTIPLPPYIARKRPIDA 174
F D + A VID + L F G E + +L +G PLP +I KRP +
Sbjct: 113 FGEDDS---MVAEVIDNTTSRGRTLRFLYDGPHDEFKAALYALGEAPLPKHIV-KRPAEP 168
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D +Q +A+ +G+V AP+AGLHF+ L+ RL G+ FVT+H G G F + VED
Sbjct: 169 EDMERFQCIFARNEGAVTAPSAGLHFSRELMKRLEIKGVNFAFVTMHCGLGCFRDIDVED 228
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
H M SE F+ A + +N+ K G R+ +VGTT R+LETA D + ++G+TN
Sbjct: 229 LTKHKMDSEEMFVGADACRIVNTAKEGGHRVCAVGTTVQRVLETAVGTDCNLKEFTGWTN 288
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
FI P Y F D +++NF++P ST+LML +A+ G + + Y+ A+ YRF +YGD
Sbjct: 289 KFIFPPYEFGVADCMVANFYMPYSTMLMLTAAYGGYDLVMQGYKEALKEGYRFGTYGDAM 348
Query: 355 LLFQ 358
L+
Sbjct: 349 LILN 352
>gi|205374301|ref|ZP_03227100.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
coahuilensis m4-4]
Length = 322
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 125/305 (40%), Positives = 178/305 (58%), Gaps = 17/305 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDF LP IA P+ R +RLMV+ I + D+ L+ D +V
Sbjct: 1 MKVEDFDFYLPEELIAQTPLEERSKSRLMVIDKITG---DIKHRVFEDILYDLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L GV+ ++ C L + + W +P+K +K G +L F
Sbjct: 58 LNDTRVLPARLYGVK----EETGAKVECLLLKQEEGDEWETLIKPAKRVKVGTVLTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A + + + G ++ F GI E + +G +PLPPYI + +D RD Y
Sbjct: 111 -GDGRLKAECVAEKDHGGRMMRFIYDGIFYE-VLEELGEMPLPPYI--RETLDDRDR--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +AK +GS AAPTAGLHFT +LL ++ G+ + F+TLHVG GTF PV VE ++H M
Sbjct: 165 QTVFAKERGSAAAPTAGLHFTEDLLKKIGEKGVHIAFITLHVGLGTFRPVSVESIEEHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA+ LN VK RGGRI++VGTTS R LET A+ DG + SG+T+IFI P
Sbjct: 225 HAEFYQMTEGTARLLNEVKERGGRIITVGTTSTRTLETIASKYDGEFHEESGWTDIFIYP 284
Query: 300 GYRFR 304
GY F+
Sbjct: 285 GYEFK 289
>gi|194477169|ref|YP_002049348.1| Queuosine biosynthesis protein [Paulinella chromatophora]
gi|171192176|gb|ACB43138.1| Queuosine biosynthesis protein [Paulinella chromatophora]
Length = 373
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 136/363 (37%), Positives = 208/363 (57%), Gaps = 37/363 (10%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLV--ISDH-LVSDLPAFLNSNDAIVFN 62
+ F LP IA P PR +AR+++V PL+ S+H V DL L +ND ++ N
Sbjct: 13 YSFQLPKEHIAQIPAEPRHNARMLMV------PLLGQKSNHGRVWDLINQLQTNDLLIVN 66
Query: 63 NTKVITAQLNGVRFCHINRREK--EISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NTKV+ A+L I + E + L + +W A+PSK+ + G ++ +
Sbjct: 67 NTKVLRAKL-------IVKSESGPKGELLLLESLGRGTWLCLAKPSKIFQPGKQVNIEAL 119
Query: 121 DGQSRLEATVID-KWNTGEILLVF--------SISGIELERQISLVGTIPLPPYIARKRP 171
G+ L ++D +TG L++F SI+ + + + G IP+PPYI ++
Sbjct: 120 -GKPPLAIKILDIDKSTGGRLVLFPTHFDNFNSIAPL-----LEIYGNIPMPPYITKQNC 173
Query: 172 IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK 231
ID Y QT YA G+VAAPTAGLHF+ +LS L I + VTLH+G GTF P++
Sbjct: 174 IDDERY---QTRYADKVGAVAAPTAGLHFSDEMLSALYKKNIHIAKVTLHIGLGTFRPIR 230
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE-TATTEDGIINPWS 290
E+ ++ +H+E I T A+ S +++GGR++++GTT++R LE ++ +G + P+
Sbjct: 231 QENLEELKLHTEWVEISRETVNAVKSCQTKGGRVIAIGTTTVRALEGSSQLNNGELKPFI 290
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G NI I PGY+F+ VD L +NFH P S+LL +VSAF G + ++YQ AI YRF+SY
Sbjct: 291 GPVNIVIKPGYQFKVVDALFTNFHFPDSSLLFMVSAFIGRVQLLQLYQEAIGLGYRFFSY 350
Query: 351 GDT 353
GD+
Sbjct: 351 GDS 353
>gi|86134467|ref|ZP_01053049.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase
[Polaribacter sp. MED152]
gi|85821330|gb|EAQ42477.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase
[Polaribacter sp. MED152]
Length = 349
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 132/363 (36%), Positives = 195/363 (53%), Gaps = 22/363 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF+LP +A P RD +RLMV++ I D+ + + D ++
Sbjct: 1 MKLSNFDFELPEELLAKYPAEHRDESRLMVLNRKEQT---IEHKTFKDVINYFDEGDVLM 57
Query: 61 FNNTKVITAQLNGVRFCHINRREK-----EISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
NNTKV A++ G +EK E+ + W V P++ I+ G+ L
Sbjct: 58 LNNTKVFPARMYG-------NKEKTGARIEVFLLRELNAENRLWDVLVDPARKIRIGNKL 110
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISG-IELERQISL-VGTIPLPPYIARKRPID 173
FF +D L A VID + L F G E R+ L +G PLP + R+ ++
Sbjct: 111 -FFGEDDS--LVAEVIDNTTSRGRTLRFLFDGSYEAFREKLLELGETPLPRSVNRE--VE 165
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT +AK +G+VAAPTAGLHF+ +LL RL G+ +TLHVG GTF PV+VE
Sbjct: 166 ELDEERYQTIFAKNEGAVAAPTAGLHFSKHLLKRLEIKGVDFAEMTLHVGLGTFSPVEVE 225
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
D H M SE I A A +N K+ R+ +VGTT +R +E++ + + +NP+ G+T
Sbjct: 226 DLSKHKMDSEQIVIPANAADKINKAKAEKRRVCAVGTTVMRTVESSVSSNAQLNPFEGWT 285
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
N FI P Y F + +++NFH PKSTL+M +AF G + + Y+ A+ Y+F +YGD
Sbjct: 286 NKFIFPPYEFSIANSMITNFHPPKSTLMMQAAAFAGYDFLMEAYKTAVKEGYKFSTYGDA 345
Query: 354 SLL 356
++
Sbjct: 346 MII 348
>gi|78189254|ref|YP_379592.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Chlorobium
chlorochromatii CaD3]
gi|91207418|sp|Q3AR26|QUEA_CHLCH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|78171453|gb|ABB28549.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Chlorobium
chlorochromatii CaD3]
Length = 341
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 129/359 (35%), Positives = 193/359 (53%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD+ LP RIA P R S RL+V++ ++ L + L FL + D ++
Sbjct: 1 MQVADFDYHLPEERIAKYPPLERGSTRLLVLNRQSGA---LTHSLYAHLDTFLQAGDLLL 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L R I L R V R +K G++L
Sbjct: 58 LNNTRVVPARLFATRATGAT-----IELMLLERHHHREQLVLYRGQ--LKAGEML----- 105
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
QS ++++ + + G +L + + G++P+PPY+ KR +A D Y
Sbjct: 106 --QSHGHTLLVEEVLPQGLARLALADGGDLHQFFTQFGSVPIPPYL--KRNAEAVDRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A GSVAAPTA L+ T LL RL + G+++ +TLHVG GTF+P++ E ++H+M
Sbjct: 162 QTVFAAHSGSVAAPTASLNMTPELLQRLKNNGVEIAHITLHVGLGTFLPIRTESLEEHVM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT---TEDGIINPWSGFTNIFI 297
H E + A + AL VK+ GGR+V+VGTT R LE + + G +IFI
Sbjct: 222 HRESYLLPAESVAALQRVKADGGRVVAVGTTVTRALEHSAPRILQSSAHAEIEGEADIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGYRF+ VD+L++NFH P+ST+LML +A G + + Y A+ Y F SYGD+ L+
Sbjct: 282 YPGYRFQMVDLLLTNFHAPRSTVLMLTAACAGTDNLRAAYSEAVLQGYNFLSYGDSMLI 340
>gi|187250918|ref|YP_001875400.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
[Elusimicrobium minutum Pei191]
gi|186971078|gb|ACC98063.1| S-Adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Elusimicrobium minutum Pei191]
Length = 341
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 135/351 (38%), Positives = 191/351 (54%), Gaps = 31/351 (8%)
Query: 15 IALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGV 74
IA P PRDSA+LMV++ + I + D+ + D +V N+TKV A+L
Sbjct: 12 IARTPATPRDSAKLMVLNRDGQ---KIEHRIFRDISQYFTPGDCLVINDTKVFPAKL--- 65
Query: 75 RFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKW 134
F K + PN W+ R K+G L F S+D L+A + +
Sbjct: 66 -FAKKPTGGKVEVLLVRPLEKPNEWTALMRD---YKEGIELSF-SED----LKAVMDFRN 116
Query: 135 NTGEILLVFS---ISGIELERQISLVGTIPLPPYIARKRPIDA------RDYVDYQTTYA 185
GE++L F+ + G E G +PLP YI + R D D YQT YA
Sbjct: 117 ENGEVILKFNNDDVLGYACEN-----GLMPLPQYIEKARKHDGLSASIETDKERYQTVYA 171
Query: 186 KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIG 245
+ QGS+AAPTAG HFT LL ++ G+K+ VTLH+G GTF P+K D +H M +E G
Sbjct: 172 QFQGSIAAPTAGFHFTPELLKKIEDKGVKIARVTLHIGWGTFKPLKT-DPKEHKMLAEYG 230
Query: 246 FIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRA 305
+ ++ +N ++ GGRI SVGTTS R LE+ T E+GI +T++FI PGY+F+A
Sbjct: 231 TVSEEASKKINEARASGGRIFSVGTTSTRTLESFT-ENGITKSGGRWTDLFIYPGYKFKA 289
Query: 306 VDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+D L++NFH P ST L + SAF + K Y A+ + YRFYS+GD+ L+
Sbjct: 290 IDCLITNFHFPDSTPLCMASAFASEDFIFKAYNEAVENNYRFYSFGDSMLI 340
>gi|15616752|ref|NP_239964.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Buchnera
aphidicola str. APS (Acyrthosiphon pisum)]
gi|11134530|sp|P57232|QUEA_BUCAI RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|25318227|pir||B84945 hypothetical protein queA [imported] - Buchnera sp. (strain APS)
gi|10038815|dbj|BAB12850.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Buchnera
aphidicola str. APS (Acyrthosiphon pisum)]
Length = 357
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 137/357 (38%), Positives = 205/357 (57%), Gaps = 20/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F FDLP S I+ P F R + RLMV++ + +I ++ +NS D I+
Sbjct: 1 MQLSDFSFDLPKSLISFHPYFIRSTCRLMVMYGHTG---MIFHKRFFNIIDEINSGDLII 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+ G + ++ + + N+ + SK I G + F +
Sbjct: 58 LNNTQVIPARFFGKK-----ESGGKVEVLVEKILGINNILASIKNSKNINIGSKIFFGYK 112
Query: 121 DGQSRLEATVIDKWNTG-EILLVFSI-SGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
D +++ +V+D N+ EI +I S I++ I+ +G IPLPPYI R R + D
Sbjct: 113 D---KIKGSVVDCKNSFFEIFFHDNIDSAIDI---INNIGEIPLPPYIKRFR--NKLDVD 164
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y K GS+AAPTAGLHF LL L + G+ + ++TLH+G+GTF P++ ++H
Sbjct: 165 LYQTVYKKKTGSIAAPTAGLHFDLPLLEALHNKGVDIDYITLHIGSGTFQPIRRVQIEEH 224
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIF 296
IMHSE + + Q + S K +GGRI++VGT++LR LE+A ++E + TNIF
Sbjct: 225 IMHSESVEVSSSVIQKIKSCKKKGGRIIAVGTSTLRALESAYHSSEWSDSQDFISDTNIF 284
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
I PGY+ VD L++NFH P+STL+MLV +F G + T Y AI + Y F+SYGD
Sbjct: 285 IYPGYKHNIVDALITNFHFPESTLIMLVCSFLGYKNTMNAYNTAIVNKYSFFSYGDA 341
>gi|219682063|ref|YP_002468447.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Buchnera
aphidicola str. Tuc7 (Acyrthosiphon pisum)]
gi|254764270|sp|B8D737|QUEA_BUCAT RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|219621796|gb|ACL29952.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Buchnera
aphidicola str. Tuc7 (Acyrthosiphon pisum)]
gi|311085876|gb|ADP65958.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Buchnera
aphidicola str. LL01 (Acyrthosiphon pisum)]
gi|311086446|gb|ADP66527.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Buchnera
aphidicola str. TLW03 (Acyrthosiphon pisum)]
Length = 357
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 137/357 (38%), Positives = 205/357 (57%), Gaps = 20/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F FDLP S I+ P F R + RLMV++ + +I ++ +NS D I+
Sbjct: 1 MQLSDFSFDLPKSLISFHPYFIRSTCRLMVMYGHTG---MIFHKRFFNIIDEINSGDLII 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+ G + ++ + + N+ + SK I G + F +
Sbjct: 58 LNNTQVIPARFFGKK-----ESGGKVEVLVEKILGINNILASIKNSKNINIGSKIFFGYK 112
Query: 121 DGQSRLEATVIDKWNTG-EILLVFSI-SGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
D +++ +V+D N+ EI +I S I++ I+ +G IPLPPYI R R + D
Sbjct: 113 D---KIKGSVVDCKNSFFEIFFHDNIDSAIDI---INNIGEIPLPPYIKRFR--NKLDVD 164
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y K GS+AAPTAGLHF LL L + G+ + ++TLH+G+GTF P++ ++H
Sbjct: 165 LYQTVYKKKTGSIAAPTAGLHFDLPLLEALHNKGVDIDYITLHIGSGTFQPIRRVQIEEH 224
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIF 296
IMHSE + + Q + S K +GGRI++VGT++LR LE+A ++E + TNIF
Sbjct: 225 IMHSESVEVSSSVIQKIKSCKKKGGRIIAVGTSTLRALESAYHSSEWSDSKDFISDTNIF 284
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
I PGY+ VD L++NFH P+STL+MLV +F G + T Y AI + Y F+SYGD
Sbjct: 285 IYPGYKHNIVDALITNFHFPESTLIMLVCSFLGYKNTMNAYNTAIVNKYSFFSYGDA 341
>gi|219681507|ref|YP_002467892.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Buchnera
aphidicola str. 5A (Acyrthosiphon pisum)]
gi|257471188|ref|ZP_05635187.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Buchnera
aphidicola str. LSR1 (Acyrthosiphon pisum)]
gi|254764269|sp|B8D8T3|QUEA_BUCA5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|219624350|gb|ACL30505.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Buchnera
aphidicola str. 5A (Acyrthosiphon pisum)]
Length = 357
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 138/361 (38%), Positives = 204/361 (56%), Gaps = 28/361 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F FDLP S I+ P F R + RLMV++ + +I ++ +NS D I+
Sbjct: 1 MQLSDFSFDLPKSLISFHPYFIRSTCRLMVMYGHTG---MIFHKRFFNIIDEINSGDLII 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+ G + ++ + + N+ + SK I G + F +
Sbjct: 58 LNNTQVIPARFFGKK-----ESGGKVEVLVEKILGINNILASIKNSKNINIGSKIFFGYK 112
Query: 121 DGQSRLEATVIDKWNTG-EILLVFSI-SGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
D +++ +V+D N+ EI +I S I++ I+ +G IPLPPYI R R + D
Sbjct: 113 D---KIKGSVVDCKNSFFEIFFHDNIDSAIDI---INNIGEIPLPPYIKRFR--NKLDVD 164
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y K GS+AAPTAGLHF LL L + G+ + ++TLH+G+GTF P++ ++H
Sbjct: 165 LYQTVYKKKTGSIAAPTAGLHFDLPLLEALHNKGVDIDYITLHIGSGTFQPIRRVQIEEH 224
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF------ 292
IMHSE + + Q + S K +GGRI++VGT++LR LE+A + WS
Sbjct: 225 IMHSESVEVSSSVIQKIKSCKKKGGRIIAVGTSTLRALESAYRS----SKWSDSKDFISD 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
TNIFI PGY+ VD L++NFH P+STL+MLV +F G + T Y AI + Y F+SYGD
Sbjct: 281 TNIFIYPGYKHNIVDALITNFHFPESTLIMLVCSFLGYKNTMNAYNTAIVNKYSFFSYGD 340
Query: 353 T 353
Sbjct: 341 A 341
>gi|198283826|ref|YP_002220147.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acidithiobacillus ferrooxidans ATCC 53993]
gi|218667799|ref|YP_002426463.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acidithiobacillus ferrooxidans ATCC 23270]
gi|226713831|sp|B5EK09|QUEA_ACIF5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|198248347|gb|ACH83940.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Acidithiobacillus ferrooxidans ATCC 53993]
gi|218520012|gb|ACK80598.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acidithiobacillus ferrooxidans ATCC 23270]
Length = 345
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 136/356 (38%), Positives = 204/356 (57%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M K+F ++LP + IA P+ R +AR+++V + D V DLP L D +V
Sbjct: 1 MHKKDFHYELPDALIAQAPLPERSAARMLIVDGHQG---TWEDAWVRDLPGVLRPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L + + L + A+ SK ++ G +H
Sbjct: 58 LNDTRVLPARLQARKTTG-----GAVELLLDRLLDARDGWFLAKSSKALRPGMSIHLPGG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ E +D + L ++ + + + G++PLPPYI +R +A D Y
Sbjct: 113 AVATVEEKDGMDV----RLSLPADVAWLPI---LEAGGSMPLPPYI--RRAAEASDRERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA G+VAAPTAGLHF + LL L + G++ FVTLHVGAGTF+PV+ ED +H M
Sbjct: 164 QTVYAARPGAVAAPTAGLHFDTELLDALAARGVERTFVTLHVGAGTFLPVRSEDITEHPM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + A T A+ + ++RGGR+++VGTT+ R LETA + G + P++G T +F+ PG
Sbjct: 224 HAETMEVSATTVAAVAAARARGGRVIAVGTTACRALETA-AQGGTLRPFTGETRLFLYPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
F+ D L++NFHLP+STLLMLV AF G+E Y+HA++ YRF+SYGD L+
Sbjct: 283 KTFQVTDGLLTNFHLPESTLLMLVCAFAGMECMLAAYRHAVAEGYRFFSYGDAMLI 338
>gi|213427838|ref|ZP_03360588.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhi str. E02-1180]
Length = 331
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 137/346 (39%), Positives = 196/346 (56%), Gaps = 19/346 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAI 59
M V +F F+LP S IA P R RL+ +L P ++ +DL LN D +
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLL----SLEGPTGALTHGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEVLVERMLDDKRILAHIRASKAPKPGTEL--LL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
D +S + AT+ + G + V + ++ +G +PLPPYI RP + D
Sbjct: 110 GDDES-IHATMTARH--GALFEVEFNDPRPVLDILNAIGHMPLPPYI--DRPDEDADREL 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y++ G+VAAPTAGLHF LL+ L G+++ FVTLHVGAGTF PV+V+ +DHI
Sbjct: 165 YQTVYSEKPGAVAAPTAGLHFDEPLLAALREKGVEMAFVTLHVGAGTFQPVRVDTIEDHI 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFI 297
MHSE + A+ + K+RG R+++VGTTS+R LE+A + +I P+ G T IFI
Sbjct: 225 MHSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKSDLIEPFFGDTQIFI 284
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISH 343
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+
Sbjct: 285 YPGYQYKVIDALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQ 330
>gi|260557115|ref|ZP_05829331.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baumannii ATCC 19606]
gi|260409221|gb|EEX02523.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baumannii ATCC 19606]
Length = 345
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 137/360 (38%), Positives = 194/360 (53%), Gaps = 24/360 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP IA P+ R ++RL+ +L DH+ +D+ D +V
Sbjct: 1 MQLSDFSFELPDELIARYPLETRSASRLL----HLDAKGQYHDHMFTDIIDLFEEGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G R I + ++ + + + S K G L F
Sbjct: 57 LNDTKVMKARLKGKRATG-----GAIEILVERMLNHTTAYCHIKASNSPKAGAEL-FVGA 110
Query: 121 DGQSRLEATVIDKWNTGEILLV-FSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
D VI + + +V FS + + Q G +P+PPY R+ +A D
Sbjct: 111 DN-----IPVIVRGRHENLFVVEFSQPILPVLEQ---YGQLPIPPYFNRE--AEAIDTER 160
Query: 180 YQTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT + + SVAAPTA LHF LL++L G+K FVTLHVGAGTFMPV+ +D +
Sbjct: 161 YQTVFHNPEKIASVAAPTASLHFDEELLAKLDQKGVKKTFVTLHVGAGTFMPVRTDDITN 220
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIF 296
H+MHSE + T + + K+RG ++++VGTT+ R LE+A G I W+G T IF
Sbjct: 221 HVMHSEWCDVPQETIDLILATKARGNKVIAVGTTATRALESAAQAHGGKIAAWTGDTQIF 280
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY F VD L++NFHLP+STLLMLVSA E Y+HA+ YRF+SYGD L+
Sbjct: 281 IYPGYEFCIVDRLITNFHLPESTLLMLVSALSNRENILAAYEHAVKDRYRFFSYGDAMLI 340
>gi|225621383|ref|YP_002722641.1| S-adenosylmethionine--tR-ribosyltransferase-isomerase [Brachyspira
hyodysenteriae WA1]
gi|225216203|gb|ACN84937.1| S-adenosylmethionine--tR-ribosyltransferase-isomerase [Brachyspira
hyodysenteriae WA1]
Length = 358
Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 132/361 (36%), Positives = 201/361 (55%), Gaps = 21/361 (5%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
++F LP + IA P + RD +LM+++ + I + SD+ +LN D +V N++K
Sbjct: 10 YNFYLPENLIATTPNYERDHCKLMILNKSTG---EIEHKIFSDIINYLNKEDILVLNDSK 66
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILH--FFSQDGQ 123
VI A++ + N EI ++W + K IK+ DIL+ + + +
Sbjct: 67 VIPARIYAKKNTGGNV---EILLLNKFNNDESTWECLIK-GKNIKEKDILYLDYSNLENV 122
Query: 124 SRLEATVIDKWNTGEILLVFSISGIELERQI-SLVGTIPLPPYIARKR------PIDARD 176
+EA V++K N L+ FS L +I +G +PLPPYI + R + +D
Sbjct: 123 GNIEA-VLEKDNISTKLIKFSKP---LTSEILDAIGKVPLPPYIIQSRKKKGEEEYNDKD 178
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQ YAK +GS+A+PT+GLHFT LL ++ S+GI V +VTLHVG TF P+K +D
Sbjct: 179 KEFYQNVYAKNEGSIASPTSGLHFTKELLEKIKSMGITVCYVTLHVGFSTFNPLKEDDLR 238
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+H+MH E I + + + K G R+VS GTT R+LE+ ++ G T+IF
Sbjct: 239 NHVMHEEKFIIPKESYDIIINAKKDGRRVVSCGTTVARVLESE-YDNYDFKRMEGSTDIF 297
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y+F+ VD L++NFH P STLL +VSAF G + Y+ A+ + YRF+SYGD +
Sbjct: 298 IYPPYKFKCVDALITNFHTPHSTLLAMVSAFAGYDNIMNAYKTAVENNYRFFSYGDAMFM 357
Query: 357 F 357
+
Sbjct: 358 Y 358
>gi|226329117|ref|ZP_03804635.1| hypothetical protein PROPEN_03020 [Proteus penneri ATCC 35198]
gi|225202303|gb|EEG84657.1| hypothetical protein PROPEN_03020 [Proteus penneri ATCC 35198]
Length = 307
Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 123/302 (40%), Positives = 180/302 (59%), Gaps = 22/302 (7%)
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + R SK K+G L +
Sbjct: 8 FNNTRVIPARIYGRKASG-----GKIEVLVERMLDEHRVLAHVRASKSPKEGAAL-VLGE 61
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARKRPIDARD 176
D ++AT++ + +T +F I + ER + + +G +PLPPYI RP + D
Sbjct: 62 D--ESVQATMVARHDT-----LFEIR-FDDERDVLTILNSIGHMPLPPYI--DRPDEESD 111
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT Y + G+VAAPTAGLHF LL L G+++ FVTLHVGAGTF PV+V++ +
Sbjct: 112 KELYQTVYNERPGAVAAPTAGLHFDEPLLQALKEKGVEMAFVTLHVGAGTFQPVRVDNIE 171
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTN 294
+H MHSE + A+ + K+RG R+++VGTTS+R LE+A T D +I P+ T
Sbjct: 172 EHTMHSEYAEVPQDVVDAVLACKARGNRVIAVGTTSVRSLESAAKATNDALIAPFFDDTQ 231
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PGY+++ +D L++NFHLP+STL+MLVSAF G T Y+ A+ YRF+SYGD
Sbjct: 232 IFIYPGYQYQVIDALITNFHLPESTLIMLVSAFAGYRNTMNAYKEAVEQEYRFFSYGDAM 291
Query: 355 LL 356
+
Sbjct: 292 FI 293
>gi|116625409|ref|YP_827565.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Solibacter usitatus Ellin6076]
gi|122252302|sp|Q01SU0|QUEA_SOLUE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|116228571|gb|ABJ87280.1| Queuosine biosynthesis protein [Candidatus Solibacter usitatus
Ellin6076]
Length = 352
Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 140/370 (37%), Positives = 197/370 (53%), Gaps = 33/370 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EFD+ LP IA + R ++R++VVH D DLP FL D +V
Sbjct: 1 MNLSEFDYHLPDELIAQEALADRAASRMLVVHREQG---RWEDRCFRDLPEFLRPGDCLV 57
Query: 61 FNNTKVITAQLNGVR-------FCHINRREKE-----ISCTLHMRVSPNS--WSVYARPS 106
N+++V A+L G R N + E + L VS + W RP
Sbjct: 58 LNDSRVFPARLFGHRSGVHSLAVGKNNPKRHEFLSGAVEVFLLRAVSQDGRDWQALVRPG 117
Query: 107 KVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYI 166
+ ++ G+ + F LEA +I + GE + F SG +L +G +PLPPYI
Sbjct: 118 RKMRTGERIVF-----DEGLEAEIIARGEFGERTVRFLGSG-DLYAAFDRIGHVPLPPYI 171
Query: 167 ARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGT 226
KR D YQT +A+ +GSVAAPTAGLHFT ++ R + G V VTLHVG GT
Sbjct: 172 --KRDDSPADRERYQTVFAREKGSVAAPTAGLHFTPEVIERCQAAGADVATVTLHVGLGT 229
Query: 227 FMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII 286
F P+ E ++ +H+E I A A + + R+V+VGTTS+R LETA DG++
Sbjct: 230 FQPLHQEVVEEVKLHTEHYRITADNAGKIGAAT----RVVAVGTTSVRTLETAA-RDGVL 284
Query: 287 NPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYR 346
G T+IF+ PG FR +++NFHLP+++LL+LVSAF G + Y+HA+ YR
Sbjct: 285 E---GETDIFLYPGVPFRRTGAMLTNFHLPRTSLLVLVSAFAGKDLMLAAYRHAVEARYR 341
Query: 347 FYSYGDTSLL 356
FYSYGD L+
Sbjct: 342 FYSYGDCMLI 351
>gi|313673199|ref|YP_004051310.1| s-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Calditerrivibrio nitroreducens DSM 19672]
gi|312939955|gb|ADR19147.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Calditerrivibrio nitroreducens DSM 19672]
Length = 339
Score = 213 bits (542), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 133/358 (37%), Positives = 201/358 (56%), Gaps = 26/358 (7%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++K++DF+LP IA P R+ + LMVV + + + + D +L +V
Sbjct: 4 LLKDYDFELPEELIAQYPAEKREESNLMVVDRSKNDFFITKFKNIVD---YLPEKSFLVV 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNTKV+ +++ + + ++ + + R +K GDIL
Sbjct: 61 NNTKVLKSRIYAQKISG-----GRVEVFFIEKIDDHIFKAMTRGR--LKDGDIL------ 107
Query: 122 GQSRLEATVIDK--WNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
++ ++ K + + L + +SGI++ + G IPLPPYI KR D+ D
Sbjct: 108 ---KINDSITLKILGSCEDNLRIVELSGIDIYNLLDKFGHIPLPPYI--KREDDSHDETR 162
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ GSVAAPTAGLHFT L+ R I ++ +TL+VG GTF PVK E+ +H
Sbjct: 163 YQTVYAQKPGSVAAPTAGLHFTEELIER-IRQKHEILEITLNVGIGTFRPVKTENIQEHQ 221
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPW-SGFTNIFIT 298
MHSE FI + + +N +KS G +++SVGTT+ R LE A +DG++ + T+IFI
Sbjct: 222 MHSEKFFIPEESFKRINLLKSNGHKLISVGTTTTRCLE-AVAKDGLLQSYGESETDIFIK 280
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ +D L++NFHLPKSTL +LVS F G++ KK Y +AI RF+SYGD L+
Sbjct: 281 SGYKFQIIDHLVTNFHLPKSTLFILVSTFAGLDLMKKAYAYAIEKRMRFFSYGDAMLI 338
>gi|325831983|ref|ZP_08165080.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Eggerthella
sp. HGA1]
gi|325486304|gb|EGC88756.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Eggerthella
sp. HGA1]
Length = 361
Score = 213 bits (542), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 135/371 (36%), Positives = 192/371 (51%), Gaps = 34/371 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD++LPP IA P RD RL+V+ + + D + D+ +L ND +V
Sbjct: 1 MKTSDFDYELPPELIAQEPAADRDGCRLLVMDRSTGK---LEDRIFRDIVDYLRPNDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS-----WSVYARPSKVIKKGD-- 113
N T+V+ A+L G + E + +H R P + W V RP K +K G
Sbjct: 58 ANETRVMPARLLGAKRGTGGAAEVFLLREVHDR-EPRTNRSALWEVLVRPGKRLKPGTGA 116
Query: 114 ILHFFSQDGQSRLEATVIDKW----NTGEILLVFSISGIELERQISLVGTIPLPPYIARK 169
++ F G L A ++D W GE L + + L+ + VG PLPPYI
Sbjct: 117 VVDFADAQGDVALSAEIVD-WADGAQKGERLARLTTTLPSLDEALHAVGHTPLPPYIKNY 175
Query: 170 RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
A D YQT Y++ + S AAPTAGLHFT L+ RL G++ V L VG TF
Sbjct: 176 ----AGDEELYQTVYSRRESSAAAPTAGLHFTPALIERLRDQGVRWETVELEVGLDTFRI 231
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPW 289
V +D H++H+E + T A+ + R GR+V+VGTTS+R LE+A NP
Sbjct: 232 VDEDDPQKHVIHTEYYTVPQRTVDAIAETRERSGRVVAVGTTSVRSLESA------WNPE 285
Query: 290 SGF--------TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAI 341
+G T++++ PG +F VD L++NFH+P+STL+MLVSAF E Y+HAI
Sbjct: 286 TGAVTARDRETTSLYLLPGSQFHVVDALVTNFHVPRSTLMMLVSAFSSREHIMAAYEHAI 345
Query: 342 SHAYRFYSYGD 352
YR S+GD
Sbjct: 346 EERYRLLSFGD 356
>gi|237742323|ref|ZP_04572804.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. 4_1_13]
gi|229429971|gb|EEO40183.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. 4_1_13]
Length = 351
Score = 213 bits (542), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 132/358 (36%), Positives = 205/358 (57%), Gaps = 26/358 (7%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
++D+ LP I +P PRDSA+L++++ I ++ +L D +V N T
Sbjct: 15 DYDYFLPEELIGQKPREPRDSAKLILINRKTGS---IEHKHFYNIVDYLQKGDVLVRNAT 71
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHM----RVSPNSWSVYARPSKVIKKGDILHFFSQ 120
KVI A++ F H K+ L + R+S ++W +P+K +K G L+
Sbjct: 72 KVIPARI----FGH-----KDTGGVLEILLVKRISLDTWECLLKPAKKLKLGQKLYI--- 119
Query: 121 DGQSR-LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G+++ L A +++ G +L F G E + +G++PLPPYI RK ++ +D
Sbjct: 120 -GENKELIAELLEIKEDGNRILKFYHEG-SFEEILDKLGSMPLPPYITRK--LENKD--R 173
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ SVAAPTAGLHFT LL +++ G+ + + L VG GTF PV+ E+ +H
Sbjct: 174 YQTVYAQRGESVAAPTAGLHFTEELLKKILDKGVVIVDIFLEVGLGTFRPVQTENVLEHK 233
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH E I A+ +N K+ G RI+SVGTT+ R LE++ ++G + T IFI P
Sbjct: 234 MHEESFEISEKAAKIINEAKTEGRRIISVGTTATRALESSVDKNGKLIAQKKDTGIFIYP 293
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY+F+ ++ L++NFHLPKSTLLMLVSA E+ ++Y A+ Y F+S+GD+ ++
Sbjct: 294 GYKFKIINALITNFHLPKSTLLMLVSALYDREKMLEIYNLAVKEKYHFFSFGDSMFIY 351
>gi|194334270|ref|YP_002016130.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Prosthecochloris aestuarii DSM 271]
gi|194312088|gb|ACF46483.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Prosthecochloris aestuarii DSM 271]
Length = 346
Score = 213 bits (542), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 127/359 (35%), Positives = 195/359 (54%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F + LP ++IA RPV PRDS++LMV++ I D+ +F D ++
Sbjct: 1 MRLSNFRYSLPKTKIADRPVSPRDSSKLMVLNRRKKE---IEHKTFGDIVSFFKKGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
NN++V A++ F + + +I L ++ + W V P++ ++ G+ ++F
Sbjct: 58 LNNSRVFPAKI----FGQKEKTDAKIEVFLLRELNKEAGLWDVLVDPARKVRVGNKIYF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
Q + A V+D + + F I++ + +GT+PLPPY +RK DA D
Sbjct: 113 ----QDDVVAEVVDNTTSRGRTIRFLNPEIDVFDLVEKIGTVPLPPYFSRKP--DAGDRE 166
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT YA G+V AP AGLHFT LL + G+K+ +TLH +F ++VED H
Sbjct: 167 DYQTVYASQTGAVVAPMAGLHFTMPLLEAIKKKGVKILPITLHPSLSSFNAIEVEDVSKH 226
Query: 239 IMHSEIGFIDAPTAQALNSVK-SRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
M SE I TA +N K ++ GRI++VGTT+ R+LE T +G I G+T+ FI
Sbjct: 227 KMDSEYFNIPYQTAMEVNETKLNKSGRIIAVGTTTCRVLEANATVEGKIKFGQGWTDKFI 286
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
P Y+F+ D L++NF P++TLLM+VSAF Y+ A+ YRF +YGD +
Sbjct: 287 YPPYQFKVTDALVANFQQPETTLLMMVSAFAEHRFLMDSYKTAMKENYRFLAYGDAMFI 345
>gi|320537237|ref|ZP_08037199.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Treponema
phagedenis F0421]
gi|320145912|gb|EFW37566.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Treponema
phagedenis F0421]
Length = 348
Score = 213 bits (542), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 136/356 (38%), Positives = 191/356 (53%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M K+FDF LP IA +P R +L+++ SD S+LP L N +V
Sbjct: 1 MNTKDFDFYLPEHLIAQKPSGKRGEDKLLLLDKKTGA---FSDRQFSELPDILPPNALMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV A++ + ++ + S + ++ +K K+ I F
Sbjct: 58 FNNSKVRRARV------YAKSKDSGAQTEFLLIDSLDDGRLWQAMTKKAKRQRIGKTFLF 111
Query: 121 DGQSRLEATVID---KWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
D +EA V++ +T + + + G IPLPPYI +R D
Sbjct: 112 D--EGVEAMVVEPPANTDTSAEFRWLQFNTPITDSWLETHGHIPLPPYI--RREDTEEDA 167
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YA+ GS+AAPTAGLHFT +L R+ + GI+ +TLHVG GTF+PV+ E ++
Sbjct: 168 SRYQTVYAQTTGSIAAPTAGLHFTDEILQRIDARGIERTAITLHVGLGTFLPVRTEKIEE 227
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-INPWSGFTNIF 296
H MH+E FI TA A+ K G I++VGTTS+R LE+A D + S TNIF
Sbjct: 228 HRMHTEKFFITDTTATAIEKAKREGRPIIAVGTTSVRSLESAWNPDTQRLMRGSQSTNIF 287
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
I P Y+F+ VD+L +NFH P+STLLMLVSA G ++ Y HA+ YRF+SYGD
Sbjct: 288 IYPPYQFKLVDMLFTNFHTPESTLLMLVSALAGKDQILAAYAHAVEQEYRFFSYGD 343
>gi|184159481|ref|YP_001847820.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baumannii ACICU]
gi|294842533|ref|ZP_06787216.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter sp. 6014059]
gi|238690996|sp|B2HYN4|QUEA_ACIBC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|183211075|gb|ACC58473.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Acinetobacter baumannii ACICU]
gi|322509394|gb|ADX04848.1| queA [Acinetobacter baumannii 1656-2]
gi|323519415|gb|ADX93796.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baumannii TCDC-AB0715]
Length = 345
Score = 213 bits (542), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 136/360 (37%), Positives = 194/360 (53%), Gaps = 24/360 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP IA P+ R ++RL+ +L DH+ +D+ D +V
Sbjct: 1 MQLSDFSFELPDELIARYPLETRSASRLL----HLDAKGQYHDHMFTDIIDLFEEGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G R I + ++ + + + S K G L F +
Sbjct: 57 LNDTKVMKARLKGKRATG-----GAIEILVERMLNHTTAYCHIKASNSPKAGAEL-FVGE 110
Query: 121 DGQSRLEATVIDKWNTGEILLV-FSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
D VI + + +V FS + + Q G +P+PPY R+ + D
Sbjct: 111 DN-----IPVIVRGRHENLFVVEFSQPILPVLEQ---YGQLPIPPYFNRE--AEEIDTER 160
Query: 180 YQTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT + + SVAAPTA LHF LL++L G+K FVTLHVGAGTFMPV+ +D +
Sbjct: 161 YQTVFHNPEKIASVAAPTASLHFDEELLAKLDQKGVKKTFVTLHVGAGTFMPVRTDDITN 220
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIF 296
H+MHSE + T + + K+RG ++++VGTT+ R LE+A G I W+G T IF
Sbjct: 221 HVMHSEWCDVPQETIDLILATKARGNKVIAVGTTATRALESAAQAHGGKIAAWTGDTQIF 280
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY F VD L++NFHLP+STLLMLVSA E Y+HA+ YRF+SYGD L+
Sbjct: 281 IYPGYEFCIVDRLITNFHLPESTLLMLVSALSNRENILAAYEHAVKDRYRFFSYGDAMLI 340
>gi|195952881|ref|YP_002121171.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Hydrogenobaculum sp. Y04AAS1]
gi|229892798|sp|B4U7T2|QUEA_HYDS0 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|195932493|gb|ACG57193.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Hydrogenobaculum sp. Y04AAS1]
Length = 343
Score = 213 bits (541), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 139/364 (38%), Positives = 198/364 (54%), Gaps = 28/364 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FD+DLP IA PV PR SA+LMV+ S I+ + FL D ++
Sbjct: 1 MDISLFDYDLPEELIAKYPVNPRHSAKLMVLDRKSSN---ITHSTFWHIDEFLEEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKV+ A+L G + I EI H+ W K IK G ++ S
Sbjct: 58 FNDTKVLPARLLGKK-KGIENSNVEILLLRHLE--NEKWEALV-GGKNIKPGLVIEI-SY 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIAR-KRPIDARDYVD 179
D EA V + + L++ I+ G IP+PPY+ R + PID +++
Sbjct: 113 D----FEAIVESQIEKSKFLVLLKAKNQNQIEAINKYGKIPIPPYLGRDEEPID-KEF-- 165
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +AK + SVAAPTA LHF++ LL +L + + FVTLHV GTF PV V++ ++H
Sbjct: 166 YQTVFAKKEFSVAAPTASLHFSNELLEKLKK-KVNIDFVTLHVSYGTFKPVTVQNIEEHK 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
+ E + + + K R+++VGTT R LETA I P+ GFT+++I P
Sbjct: 225 VDEEYIEVSESLIKNIKKTKKMCKRVIAVGTTVTRALETA-----IDKPYFGFTDLYIKP 279
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFC------GIEETKKMYQHAISHAYRFYSYGDT 353
G++F+ +D ++NFHLPKS+LL+LVSAFC G E K Y+ A+ H YRFYSYGD
Sbjct: 280 GFKFKVLDGFITNFHLPKSSLLILVSAFCNEENLDGREFILKSYKEAVKHKYRFYSYGDG 339
Query: 354 SLLF 357
L+
Sbjct: 340 MLIL 343
>gi|257487220|ref|ZP_05641261.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. tabaci ATCC 11528]
Length = 213
Score = 213 bits (541), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 107/197 (54%), Positives = 135/197 (68%), Gaps = 3/197 (1%)
Query: 160 IPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVT 219
+PLPPYI RP + D YQT YA+ G+VAAPTAGLHF LL + + G++ FVT
Sbjct: 2 MPLPPYI--DRPDEGADRERYQTVYAQRAGAVAAPTAGLHFDQPLLEAIAAKGVETAFVT 59
Query: 220 LHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA 279
LHVGAGTF PV+VE +DH MHSE + A+ + ++RGGR+++VGTTS+R LE+A
Sbjct: 60 LHVGAGTFQPVRVEQIEDHHMHSEWLEVGQDVVDAVAACRARGGRVIAVGTTSVRSLESA 119
Query: 280 TTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQH 339
DG + P+SG T+IFI PG F VD L++NFHLP+STLLMLVSAF G ET Y
Sbjct: 120 -ARDGELKPFSGDTDIFIYPGRPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAA 178
Query: 340 AISHAYRFYSYGDTSLL 356
AI H YRF+SYGD +
Sbjct: 179 AIEHGYRFFSYGDAMFI 195
>gi|317488559|ref|ZP_07947104.1| tRNA ribosyltransferase-isomerase [Eggerthella sp. 1_3_56FAA]
gi|316912301|gb|EFV33865.1| tRNA ribosyltransferase-isomerase [Eggerthella sp. 1_3_56FAA]
Length = 359
Score = 212 bits (540), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 135/365 (36%), Positives = 191/365 (52%), Gaps = 24/365 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+DLPP IA P RD RL+V++ + D + D+ +L ND +V
Sbjct: 1 MKTSDFDYDLPPELIAQEPAAERDGCRLLVMN---RVTGEVEDRVFRDIVDYLTPNDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS-----WSVYARPSKVIKKGD-- 113
N T+V+ A+L G + E + L +P W V RP K +K G
Sbjct: 58 ANETRVMPARLLGAKRGTGGAAEVFL---LRQHGTPTENRSALWEVLVRPGKRLKPGTGA 114
Query: 114 ILHFFSQDGQSRLEATVIDKW----NTGEILLVFSISGIELERQISLVGTIPLPPYIARK 169
++ F G+ L A ++D W GE L + L+ + VG PLPPYI
Sbjct: 115 VVDFVDAVGEVALSAEIVD-WLPDAQKGERLARLTTPLPSLDEALHAVGHTPLPPYIKDY 173
Query: 170 RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
A D YQT Y++ + S AAPTAGLHFT L+ RL G++ V L VG TF
Sbjct: 174 ----AGDEELYQTVYSRRESSAAAPTAGLHFTPALIERLREQGVRWETVELEVGLDTFRI 229
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINP 288
V +D H +H+E + T +A+ + RGGR+V+VGTTS+R LE+A + G + P
Sbjct: 230 VDEDDPTQHAIHTEYYTVPERTVEAIAETRERGGRVVAVGTTSVRSLESAWDDGTGAVTP 289
Query: 289 WS-GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
T++++ PG +F VD L++NFH+P+STL+MLVSAF E Y+HAI YR
Sbjct: 290 RDRETTSLYLLPGSQFHVVDALITNFHVPRSTLMMLVSAFSTREHIMAAYRHAIEERYRM 349
Query: 348 YSYGD 352
S+GD
Sbjct: 350 LSFGD 354
>gi|110597960|ref|ZP_01386241.1| Queuosine biosynthesis protein [Chlorobium ferrooxidans DSM 13031]
gi|110340409|gb|EAT58898.1| Queuosine biosynthesis protein [Chlorobium ferrooxidans DSM 13031]
Length = 347
Score = 212 bits (540), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 137/367 (37%), Positives = 195/367 (53%), Gaps = 32/367 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+DLP +IA P R S R++V+ + + L +L D +V
Sbjct: 1 MRASDFDYDLPEEKIACYPPEERGSTRMLVLD---RASGALRHAWYAALDEYLEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKV+ A+L+ ++ + +I L + + V R +KKGD L + +
Sbjct: 58 LNNTKVVRARLHALK-----QTGAKIELMLLEKHQADQDRVLYRGK--LKKGDTLVAYDK 110
Query: 121 DGQSRLEATVIDKWNTGEILLVF---SISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
E V D + G + F S SG + G +P+PPY+ KR + D
Sbjct: 111 ------ELLVSDIVDDGVARIEFRGGSQSG-SIRDFFERFGAVPIPPYL--KRDAEEVDR 161
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT +A++ GSVAAPTA L+ T LL + G+ V VTLHVG GTF+P++VE +
Sbjct: 162 ERYQTVFAELPGSVAAPTASLNMTPELLENIRLKGVDVVTVTLHVGLGTFLPIRVESLRE 221
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN--------PW 289
H+MH E I A T + + VK+ GGRIV+VGTT R LE A I+ P
Sbjct: 222 HVMHREYYSISAETVEKIRKVKAAGGRIVAVGTTVTRALEHAAGR--IVRSSCRAGDAPI 279
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
+G +IFI PGY F+ +D L++NFH P+ST+LML +AF G E K+ YQ A+ Y F S
Sbjct: 280 TGEADIFIFPGYSFQVIDALLTNFHAPRSTVLMLTAAFAGAEHLKRAYQSALEEGYFFLS 339
Query: 350 YGDTSLL 356
YGD+ L+
Sbjct: 340 YGDSMLI 346
>gi|255589610|ref|XP_002535022.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase, putative
[Ricinus communis]
gi|223524180|gb|EEF27363.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase, putative
[Ricinus communis]
Length = 266
Score = 212 bits (540), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 121/253 (47%), Positives = 160/253 (63%), Gaps = 10/253 (3%)
Query: 104 RPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLP 163
+ S+ K G +LH S D Q+ + D ++ I L+ + S + Q G +PLP
Sbjct: 16 KSSRSPKAGSLLHL-SGDYQAEVLGRQADMFH---IRLLGNESWYDFLEQ---YGQLPLP 68
Query: 164 PYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVG 223
PYI K DA D YQT +AK G+VAAPTAGLHF LL LI+ G+ V +VTLHVG
Sbjct: 69 PYIEHK--ADAADDTRYQTVFAKHAGAVAAPTAGLHFDEALLQALINKGVHVRYVTLHVG 126
Query: 224 AGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED 283
AGTF PVKV++ +H MHSE+ + T + + ++ G R+ +VGTTSLR LE+A
Sbjct: 127 AGTFQPVKVDNIAEHHMHSEVYHLPEETISTILNARANGKRVTAVGTTSLRTLESA-AHV 185
Query: 284 GIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISH 343
G + G TNIFITPG+ F+ VD L++NFHLPKSTL+MLVSAF G + +K Y HAI
Sbjct: 186 GKLFAHHGDTNIFITPGFEFKLVDRLITNFHLPKSTLMMLVSAFGGYDLMRKAYAHAIDQ 245
Query: 344 AYRFYSYGDTSLL 356
+YRF+SYGD L+
Sbjct: 246 SYRFFSYGDAMLI 258
>gi|89890087|ref|ZP_01201598.1| S-adenosylmethionine, tRNA-ribosyltransferase-isomerase
[Flavobacteria bacterium BBFL7]
gi|89518360|gb|EAS21016.1| S-adenosylmethionine, tRNA-ribosyltransferase-isomerase
[Flavobacteria bacterium BBFL7]
Length = 350
Score = 212 bits (540), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 131/360 (36%), Positives = 191/360 (53%), Gaps = 16/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F + LP + IA P RD +RLMV+H I + D+ + +D V
Sbjct: 1 MKLSQFGYKLPENLIAQHPAENRDESRLMVLHKKTG---EIEHKMFKDVLDYFEEDDVFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
NNT+V A+L G + + I L ++P + W V P++ I+ G+ L+F
Sbjct: 58 TNNTRVFPARLYGNK----EKTGARIEVFLLRELNPTTKLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNT-GEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
+ L A VID + G L +F S E +++ +G PLP + R+ +
Sbjct: 114 EDES---LVAEVIDNTTSRGRTLRFLFDGSYEEFRQKLKDLGETPLPRELGREVEEEDE- 169
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YA +G+VAAP AGLHF+ +LL RL GI +T+H+G GTF PV+VED
Sbjct: 170 -ERYQTIYATNEGAVAAPVAGLHFSKHLLKRLEIKGIHRTAITMHIGLGTFAPVEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I T +N + +VGTT++R LE+A + DG +N + G+TN F
Sbjct: 229 KHKMDSEQAEITEETCAIVNKAIDTRKNVCAVGTTTMRTLESAVSSDGHLNTFDGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH PKSTL+M +AF G + KK Y AI Y+F +YGD L+
Sbjct: 289 IFPPYDFSIANAMITNFHHPKSTLMMQAAAFAGYDLLKKAYDVAIKEEYKFSTYGDAMLI 348
>gi|284036095|ref|YP_003386025.1| S-adenosylmethionine/ tRNA-ribosyltransferase-isomerase [Spirosoma
linguale DSM 74]
gi|283815388|gb|ADB37226.1| S-adenosylmethionine/ tRNA-ribosyltransferase-isomerase [Spirosoma
linguale DSM 74]
Length = 347
Score = 212 bits (540), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 138/363 (38%), Positives = 192/363 (52%), Gaps = 24/363 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EF FDLP S IA PV R +RLMVV I SD+ ++ D +V
Sbjct: 1 MKLSEFKFDLPESLIAKYPV-ERGESRLMVVDRKAKT---IEHKQFSDMLSYFGDGDVMV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREK-----EISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
NNTKV A+L G +EK E+ + W V P++ I+ G+ L
Sbjct: 57 INNTKVFPARLYG-------NKEKTGAKIEVFLLRELNREMKLWDVLVDPARKIRVGNKL 109
Query: 116 HFFSQDGQSRLEATVIDKWNTG--EILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
+F G S L A VID + I +F + E + + +G P+P + R+
Sbjct: 110 YF----GDSDLVAEVIDNTTSRGRTIRFLFDGNHEEFMKAVDELGETPIPREMNREAEDA 165
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
RD YQT +A+ G+VAAPTAGLHFT ++ R+ GI VTLHVG GTF V VE
Sbjct: 166 DRDA--YQTVFAQHVGAVAAPTAGLHFTRAMMKRMEIKGINFAPVTLHVGLGTFRQVDVE 223
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
D H SE I +AQ +N G R+ +VGTTSL+ +E++ + + + P G+T
Sbjct: 224 DLTKHKTDSENYRIPEDSAQIVNKALDAGKRVCAVGTTSLKAIESSVSANSRLKPVEGWT 283
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+ FI P Y F+ + L+++ HLP+S L+M+ SAF G E K+ YQ AI YRF+SYGD
Sbjct: 284 DRFIFPPYDFKIANSLLTSLHLPESILIMMTSAFGGHELIKEAYQVAIKEKYRFFSYGDA 343
Query: 354 SLL 356
L+
Sbjct: 344 MLI 346
>gi|329956430|ref|ZP_08297027.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
clarus YIT 12056]
gi|328524327|gb|EGF51397.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
clarus YIT 12056]
Length = 352
Score = 212 bits (539), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 125/365 (34%), Positives = 191/365 (52%), Gaps = 19/365 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P RD +RLMV+H I + D+ + + D +
Sbjct: 1 MKLSQFKFKLPEEKIALHPTRYRDESRLMVLHRKTGE---IEHRMFKDILEYFDDKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRRE----KEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
FN+TKV A+L G + R E +E++ L + W V P++ I+ G+ L+
Sbjct: 58 FNDTKVFPARLYGNKEKTGARIEVFLLRELNEELRL------WDVLVDPARKIRIGNKLY 111
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDA 174
F D + A VID + L F G E ++ + +G PLP I RP++
Sbjct: 112 FGEDDS---MVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYALGETPLPHSII-NRPVEP 167
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D +Q+ +A+ +G+V APTA LHF+ L+ R+ GI ++TLH G G F + VED
Sbjct: 168 EDSERFQSIFARNEGAVTAPTASLHFSRELMKRMEIKGIDFAYITLHAGLGNFRDIDVED 227
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
H SE + + +N K ++ +VGTT +R +E+ + DG + + G+TN
Sbjct: 228 LTKHKTDSEQMIVTEDAVKVVNRTKDLNRQVCAVGTTVMRAIESTVSTDGHLKEYEGWTN 287
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
FI P Y F + ++SNFH+P STLLM+V+AF G E+ + Y A+ YRF +YGD
Sbjct: 288 KFIFPPYDFTVANAMVSNFHMPLSTLLMIVAAFGGYEQVMEAYNVALKEDYRFGTYGDAM 347
Query: 355 LLFQK 359
L+ K
Sbjct: 348 LITDK 352
>gi|189464705|ref|ZP_03013490.1| hypothetical protein BACINT_01049 [Bacteroides intestinalis DSM
17393]
gi|189436979|gb|EDV05964.1| hypothetical protein BACINT_01049 [Bacteroides intestinalis DSM
17393]
Length = 352
Score = 212 bits (539), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 126/365 (34%), Positives = 191/365 (52%), Gaps = 19/365 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P RD +RLMV+H I D+ + + D +
Sbjct: 1 MKLSQFKFKLPEEKIALHPTKYRDESRLMVLHRKTGE---IEHKEFKDVLNYFDDKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRRE----KEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
FN+TKV A+L G + R E +E++ L + W V P++ I+ G+ L+
Sbjct: 58 FNDTKVFPARLYGNKEKTGARIEVFLLRELNEELRL------WDVLVDPARKIRIGNKLY 111
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDA 174
F D + A VID + L F G E ++ + +G PLP I RP++
Sbjct: 112 FGDDDS---MVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYALGETPLPHSII-NRPVEP 167
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D +Q+ +A+ +G+V APTA LHF+ L+ RL GI ++TLH G G F + VED
Sbjct: 168 DDSERFQSIFARNEGAVTAPTASLHFSRELMKRLEIKGIDFAYITLHAGLGNFRDIDVED 227
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
H SE ++ +N K ++ +VGTT +R +E+ + DG + P+ G+TN
Sbjct: 228 LTKHKTDSEQMVVNEEAVSIVNRAKDMNRQVCAVGTTVMRAIESTVSTDGHLKPYEGWTN 287
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
FI P Y F + ++SNFH+P STLLM+V+AF G ++ + Y A+ YRF +YGD
Sbjct: 288 KFIFPPYDFTVANAMISNFHMPLSTLLMIVAAFGGYDQVMEAYNVALKEGYRFGTYGDAM 347
Query: 355 LLFQK 359
L+ K
Sbjct: 348 LITDK 352
>gi|239501681|ref|ZP_04660991.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baumannii AB900]
gi|238685530|sp|A3M8S1|QUEA_ACIBT RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|193078344|gb|ABO13315.2| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baumannii ATCC 17978]
Length = 345
Score = 212 bits (539), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 136/360 (37%), Positives = 193/360 (53%), Gaps = 24/360 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP IA P+ R ++RL+ +L DH+ +D+ D +V
Sbjct: 1 MQLSDFSFELPDELIARYPLETRSASRLL----HLDAKGQYHDHMFTDIIDLFEEGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G R I + ++ + + + S K G L F
Sbjct: 57 LNDTKVMKARLKGKRATG-----GAIEILVERMLNHTTAYCHIKASNSPKAGAEL-FVGA 110
Query: 121 DGQSRLEATVIDKWNTGEILLV-FSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
D VI + + +V FS + + Q G +P+PPY R+ + D
Sbjct: 111 DN-----IPVIVRGRHENLFVVEFSQPILPVLEQ---YGQLPIPPYFNRE--AEEIDTER 160
Query: 180 YQTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT + + SVAAPTA LHF LL++L G+K FVTLHVGAGTFMPV+ +D +
Sbjct: 161 YQTVFHNPEKIASVAAPTASLHFDEELLAKLDQKGVKKTFVTLHVGAGTFMPVRTDDITN 220
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIF 296
H+MHSE + T + + K+RG ++++VGTT+ R LE+A G I W+G T IF
Sbjct: 221 HVMHSEWCDVPQETIDLILATKARGNKVIAVGTTATRALESAAQAHGGKIAAWTGDTQIF 280
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY F VD L++NFHLP+STLLMLVSA E Y+HA+ YRF+SYGD L+
Sbjct: 281 IYPGYEFCIVDRLITNFHLPESTLLMLVSALSNRENILAAYEHAVKDRYRFFSYGDAMLI 340
>gi|258615069|ref|ZP_05712839.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium DO]
Length = 216
Score = 212 bits (539), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 113/211 (53%), Positives = 141/211 (66%), Gaps = 6/211 (2%)
Query: 143 FSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTS 202
F GI LE SL G +PLPPYI + D YQT YAK GS AAPTAGLHFT
Sbjct: 6 FEYEGIFLEILESL-GEMPLPPYIKER----LEDPDRYQTVYAKENGSAAAPTAGLHFTK 60
Query: 203 NLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRG 262
LL + + G+++ ++TLHVG GTF PV V+ ++H MHSE + A+ LN V+ G
Sbjct: 61 ELLDEIEAKGVELVYLTLHVGLGTFRPVSVDKIEEHHMHSEFYRLTEEAAERLNQVRKNG 120
Query: 263 GRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLL 321
G+IV+VGTTS+R LET T+ +G I SG+T+IFITPGY F+ V+ +NFHLPKSTL+
Sbjct: 121 GKIVAVGTTSIRTLETIGTKFNGEIKADSGWTDIFITPGYEFKVVEAFSTNFHLPKSTLV 180
Query: 322 MLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
MLVSAF G E T YQHAI YRF+S+GD
Sbjct: 181 MLVSAFAGRELTLSAYQHAIEERYRFFSFGD 211
>gi|255037016|ref|YP_003087637.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Dyadobacter
fermentans DSM 18053]
gi|254949772|gb|ACT94472.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Dyadobacter fermentans DSM 18053]
Length = 349
Score = 211 bits (538), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 134/363 (36%), Positives = 189/363 (52%), Gaps = 22/363 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EF FDLP S IAL P R +RLMVVH I +D+ + + D +
Sbjct: 1 MKLSEFKFDLPQSLIALHPS-DRGESRLMVVHRKTG---EIEHKTFADVINYFDDGDVMA 56
Query: 61 FNNTKVITAQLNGVRFCHINRREK-----EISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
N+TKV A+L G ++EK E+ + W V P++ I+ G+ L
Sbjct: 57 INDTKVFPARLYG-------QKEKTGAKIEVFLLRELNREMRLWDVLVDPARKIRVGNKL 109
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIE--LERQISLVGTIPLPPYIARKRPID 173
+F G S L A VID + + F G + + +G PLPP I +R ++
Sbjct: 110 YF----GDSDLVAEVIDNTTSRGRTIRFLYDGDNDAFMKLVDELGETPLPPEIISRRKVE 165
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
+ D +QT +A+ G+VAAPTAG+HFT ++ RL G+ VTLHVG GTF V VE
Sbjct: 166 SADRERFQTIFAEHVGAVAAPTAGMHFTKAIMKRLEIKGVSFAPVTLHVGLGTFRTVDVE 225
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
D H SE I TA+ +N RI +VGTTSLR +E++ + G + P G+T
Sbjct: 226 DLTKHKTDSENYRITQSTAEVVNKAIDGKKRICAVGTTSLRAIESSVSASGHLKPVEGWT 285
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+ F+ P Y F+ + L+SNF LP+S LLM AF G + K Y AI Y+F++YGD
Sbjct: 286 DKFVFPPYDFKIANALLSNFQLPESILLMAACAFGGFDLVMKAYDIAIKEKYKFFTYGDA 345
Query: 354 SLL 356
L+
Sbjct: 346 MLI 348
>gi|291288355|ref|YP_003505171.1| S-adenosylmethionine/ tRNA-ribosyltransferase-isomerase
[Denitrovibrio acetiphilus DSM 12809]
gi|290885515|gb|ADD69215.1| S-adenosylmethionine/ tRNA-ribosyltransferase-isomerase
[Denitrovibrio acetiphilus DSM 12809]
Length = 341
Score = 211 bits (538), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 123/357 (34%), Positives = 199/357 (55%), Gaps = 24/357 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++DFDLP IA P R +++L+VV+ + D + +D+ ++ N +V N
Sbjct: 8 ISDYDFDLPEELIAQYPAEKRGTSKLLVVNGE-----ALYDKIFTDIVDLIDENSFLVIN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
TKV+ A+L G + ++ + + S + + +K+G +++
Sbjct: 63 TTKVMKARLYGTKPTG-----GQVEILVLEKTSERICTAITKGK--VKEGTVVNI----- 110
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
A + + + G ++ F ++ + G +PLPPYI R+ +D YQT
Sbjct: 111 -PPFRAVITEILDDGSRVIEFDT---DVSDVMDKCGHMPLPPYITREDT--KKDTDRYQT 164
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
Y+K +GSVAAPTAGLHFT +++ L + GI+V VTL++G GTF PVK + +DH MH+
Sbjct: 165 IYSKDEGSVAAPTAGLHFTPEIMNALKAKGIEVLEVTLNIGIGTFRPVKADYLEDHDMHT 224
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E +I T+ +NS+ G ++V+VGTT++R LE+A E+G + G T +FI PGY
Sbjct: 225 EKYYISEETSDRINSLLKEGKKLVAVGTTAVRALESA-AENGEVQAGYGETKLFIKPGYD 283
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
F+ + L++NFHLPKSTL +LVS G Y+HA ++ Y+F+SYGD + K
Sbjct: 284 FKVISSLITNFHLPKSTLFVLVSQLAGRRNMLNAYEHAKANGYKFFSYGDAMFISTK 340
>gi|218131682|ref|ZP_03460486.1| hypothetical protein BACEGG_03303 [Bacteroides eggerthii DSM 20697]
gi|317474696|ref|ZP_07933970.1| tRNA ribosyltransferase-isomerase [Bacteroides eggerthii 1_2_48FAA]
gi|217985985|gb|EEC52324.1| hypothetical protein BACEGG_03303 [Bacteroides eggerthii DSM 20697]
gi|316909377|gb|EFV31057.1| tRNA ribosyltransferase-isomerase [Bacteroides eggerthii 1_2_48FAA]
Length = 352
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 125/365 (34%), Positives = 191/365 (52%), Gaps = 19/365 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P RD +RLMV+H I + D+ + + D +
Sbjct: 1 MKLSQFKFKLPEEKIALHPTRYRDESRLMVLHRKTGE---IEHRMFKDILEYFDDKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRRE----KEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
FN+TKV A+L G + R E +E++ L + W V P++ I+ G+ L+
Sbjct: 58 FNDTKVFPARLYGNKEKTGARIEVFLLRELNEELRL------WDVLVDPARKIRIGNKLY 111
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDA 174
F D + A VID + L F G E ++ + +G PLP I RP++
Sbjct: 112 FGEDDS---MVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYALGETPLPHSII-NRPVEP 167
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D +Q+ +A+ +G+V APTA LHF+ L+ R+ GI ++TLH G G F + VED
Sbjct: 168 EDSERFQSIFARNEGAVTAPTASLHFSRELMKRMEIKGIDFAYITLHAGLGNFRDIDVED 227
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
H SE + + +N K ++ +VGTT +R +E+ + DG + + G+TN
Sbjct: 228 LTKHKTDSEQMIVTEEAVKIVNRAKDVNRQVCAVGTTVMRAIESTVSTDGHLKEYEGWTN 287
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
FI P Y F + ++SNFH+P STLLM+V+AF G E+ + Y A+ YRF +YGD
Sbjct: 288 KFIFPPYDFTVANAMVSNFHMPLSTLLMIVAAFGGYEQVMEAYNVALKEDYRFGTYGDAM 347
Query: 355 LLFQK 359
L+ K
Sbjct: 348 LITDK 352
>gi|169632430|ref|YP_001706166.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baumannii SDF]
gi|238688246|sp|B0VRB1|QUEA_ACIBS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|169151222|emb|CAO99905.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein ) [Acinetobacter baumannii]
Length = 351
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 137/362 (37%), Positives = 194/362 (53%), Gaps = 28/362 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP IA P+ R ++RL+ +L DH+ +D+ D +V
Sbjct: 1 MQLSDFSFELPDELIARYPLETRSASRLL----HLDAKGQYHDHMFTDIIDLFEEGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYA--RPSKVIKKGDILHFF 118
N+TKV+ A+L G +R + + + PN + Y + S K G L F
Sbjct: 57 LNDTKVMKARLKG-------KRTTGGAIEILVERMPNHTTAYCHIKASNSPKAGAEL-FV 108
Query: 119 SQDGQSRLEATVIDKWNTGEILLV-FSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
D VI + + +V FS + + Q G +P+PPY R+ + D
Sbjct: 109 GADN-----IPVIVRGRHENLFVVEFSQPILPVLEQ---YGQLPIPPYFNRE--AEEIDT 158
Query: 178 VDYQTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
YQT + + SVAAPTA LHF LL++L G+K FVTLHVGAGTFMPV+ +D
Sbjct: 159 ERYQTVFHNPEKIASVAAPTASLHFDEELLAKLDQKGVKKTFVTLHVGAGTFMPVRTDDI 218
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTN 294
+H+MHSE + T + + K+RG ++++VGTT+ R LE+A G I W+G T
Sbjct: 219 TNHVMHSEWCDVPQETIDLILATKARGNKVIAVGTTATRALESAAQAHGGKIAAWTGDTQ 278
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PGY F VD L++NFHLP+STLLMLVSA E Y+HA+ Y F+SYGD
Sbjct: 279 IFIYPGYEFCIVDRLITNFHLPESTLLMLVSALSNRENILAAYEHAVKDRYHFFSYGDAM 338
Query: 355 LL 356
L+
Sbjct: 339 LI 340
>gi|196234303|ref|ZP_03133133.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Chthoniobacter flavus Ellin428]
gi|196221657|gb|EDY16197.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Chthoniobacter flavus Ellin428]
Length = 322
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 132/358 (36%), Positives = 198/358 (55%), Gaps = 38/358 (10%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
++ ++D+ LP IA P+ R+ +R+MV+H I + P FL + D +V
Sbjct: 2 LLTSDYDYSLPDDLIASHPLARREDSRMMVLH---RAEQRIEHRFFREFPGFLRAGDLVV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A++ F + I V ++W +P + ++ G +
Sbjct: 59 LNDTRVIPARV----FADGGK----IELLFLETVREDTWKCLVKPGRKMRLGATVQIRGV 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G TV + GE ++ F+ ++L+ G +PLPPY AR ++ D Y
Sbjct: 111 TG------TVEEILPDGERIIAFT-GPVDLD----AAGELPLPPYFARA--VEPADSERY 157
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +G+VAAPTAGLHFT +L++ + FVTLHVG GTF PV+V+D H M
Sbjct: 158 QTVFARERGAVAAPTAGLHFTPEILAQ-----VPHTFVTLHVGVGTFRPVQVDDLTQHRM 212
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-INPWSGFTNIFITP 299
HSE I +A+A+N+ + R+V++GTT+ R+LE+ G+ ++ T+IFI P
Sbjct: 213 HSERFRISEESARAINAAQ----RLVAIGTTTARVLES----QGLPVSACESSTDIFIYP 264
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+ RAV L++NFHLPKSTLLMLVSA G E + Y AI+ YRFYSYGD L+
Sbjct: 265 PYQPRAVGALLTNFHLPKSTLLMLVSALAGREFVLRAYAEAIAQRYRFYSYGDCMLIL 322
>gi|319900631|ref|YP_004160359.1| S-adenosylmethionine/ tRNA-ribosyltransferase-isomerase
[Bacteroides helcogenes P 36-108]
gi|319415662|gb|ADV42773.1| S-adenosylmethionine/ tRNA-ribosyltransferase-isomerase
[Bacteroides helcogenes P 36-108]
Length = 352
Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 126/362 (34%), Positives = 191/362 (52%), Gaps = 19/362 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P RD +RLMV+H I + D+ + + D +
Sbjct: 1 MKLSQFKFKLPEEKIALHPTKYRDESRLMVLHRKTGE---IEHRMFKDILDYFDDKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRRE----KEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
FN+TKV A+L G + R E +E++ L + W V P++ I+ G+ L+
Sbjct: 58 FNDTKVFPARLYGNKEKTGARIEVFLLRELNEELRL------WDVLVDPARKIRIGNKLY 111
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDA 174
F D + A VID + L F G E ++ + +G PLP I RP++A
Sbjct: 112 FGDDDS---MVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYALGETPLPHGII-NRPVEA 167
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D +Q+ +A+ +G+V APTA LHF+ L+ R+ GI +VTLH G G F + VED
Sbjct: 168 EDAERFQSIFARNEGAVTAPTASLHFSRELMKRMEIKGIDFAYVTLHAGLGNFRDIDVED 227
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
H SE + A + +N K ++ +VGTT +R +E+ + DG + + G+TN
Sbjct: 228 LTKHKTDSEQMTVSAEAVKVVNRAKDFNRQVCAVGTTVIRAIESTVSTDGHLKEYVGWTN 287
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
FI P Y F + ++SNFH+P STLLM+V+AF G ++ Y A+ YRF +YGD
Sbjct: 288 KFIFPPYDFTVANAMVSNFHMPLSTLLMIVAAFGGYDQVMNAYDIALKEEYRFGTYGDAM 347
Query: 355 LL 356
L+
Sbjct: 348 LI 349
>gi|169794709|ref|YP_001712502.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baumannii AYE]
gi|213157920|ref|YP_002320718.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baumannii AB0057]
gi|215482296|ref|YP_002324478.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baumannii AB307-0294]
gi|294839351|ref|ZP_06784034.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter sp. 6013113]
gi|294857031|ref|ZP_06794800.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter sp. 6013150]
gi|301344894|ref|ZP_07225635.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baumannii AB056]
gi|301513643|ref|ZP_07238880.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baumannii AB058]
gi|301595286|ref|ZP_07240294.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baumannii AB059]
gi|226736726|sp|B7GWL7|QUEA_ACIB3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|226736727|sp|B7I973|QUEA_ACIB5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|238688034|sp|B0V628|QUEA_ACIBY RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|169147636|emb|CAM85499.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein ) [Acinetobacter baumannii AYE]
gi|213057080|gb|ACJ41982.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baumannii AB0057]
gi|213985971|gb|ACJ56270.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baumannii AB307-0294]
Length = 345
Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 136/360 (37%), Positives = 192/360 (53%), Gaps = 24/360 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP IA P+ R ++RL+ +L DH+ +D+ D +V
Sbjct: 1 MQLSDFSFELPDELIARYPLETRSASRLL----HLDAKGQYHDHMFTDIIDLFEEGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G R I + ++ + + + S K G L F
Sbjct: 57 LNDTKVMKARLKGKRATG-----GAIEILVERMLNHTTAYCHIKASNSPKAGAEL-FVGA 110
Query: 121 DGQSRLEATVIDKWNTGEILLV-FSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
D VI + + +V FS + + Q G +P+PPY R+ + D
Sbjct: 111 DN-----IPVIVRGRHENLFVVEFSQPILPVLEQ---YGQLPIPPYFNRE--AEEIDTER 160
Query: 180 YQTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT + + SVAAPTA LHF LL+ L G+K FVTLHVGAGTFMPV+ +D +
Sbjct: 161 YQTVFHNPEKIASVAAPTASLHFDEELLAELDQKGVKKTFVTLHVGAGTFMPVRTDDITN 220
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIF 296
H+MHSE + T + + K+RG ++++VGTT+ R LE+A G I W+G T IF
Sbjct: 221 HVMHSEWCDVPQETIDLILATKARGNKVIAVGTTATRALESAAQAHGGKIAAWTGDTQIF 280
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY F VD L++NFHLP+STLLMLVSA E Y+HA+ YRF+SYGD L+
Sbjct: 281 IYPGYEFCIVDRLITNFHLPESTLLMLVSALSNRENILAAYEHAVKDRYRFFSYGDAMLI 340
>gi|332178598|gb|AEE14287.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase
[Thermodesulfobium narugense DSM 14796]
Length = 335
Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 132/367 (35%), Positives = 201/367 (54%), Gaps = 49/367 (13%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ + ++ LP +IA P+ PRD+A+L+VV L D +V DLP FLN D I+
Sbjct: 7 LMNDLNYFLPNEKIAQNPIEPRDNAKLLVVD---RKKLSFEDCIVRDLPNFLNEGDLIIL 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ- 120
NNTKVI A R I ++ L ++ + +P K +KKG + S+
Sbjct: 64 NNTKVIKA-----RLYAITDTSAKVEMLLIKKLDNKTGLFMTKPGKRLKKGKEIIINSKK 118
Query: 121 -------DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
D Q R +I+ ++ E+++ I G IP+PPY+ +
Sbjct: 119 MGIVRDIDLQGR---RIIELYD-------------EIDKVIEEFGMIPIPPYVKKF---- 158
Query: 174 ARDYVD-YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++D+ + YQT +A + GSVAAPTAGLHFT +LL L G+ + F+TLHVG GTF +
Sbjct: 159 SKDFNEKYQTKFANVPGSVAAPTAGLHFTESLLESLREKGVLIKFITLHVGPGTFKSISN 218
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGG--RIVSVGTTSLRLLETATTEDGIINPWS 290
E + ++ E ++D + +S+K G +I+ VGTT++R +E+ E P+S
Sbjct: 219 EG--EVLLEPE--WVDI-SQDVCDSIKKAKGNNKILVVGTTTMRTVESTNLE-----PYS 268
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G+ + I PGY F+ D+ M+NFHLP ++LL L AF GIE KK Y++AI + YRFYS+
Sbjct: 269 GYIDTVILPGYNFKVPDMFMTNFHLPMTSLLALTMAFGGIELIKKAYKYAIENDYRFYSF 328
Query: 351 GDTSLLF 357
GD L+
Sbjct: 329 GDAMLIL 335
>gi|329963282|ref|ZP_08300995.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
fluxus YIT 12057]
gi|328528821|gb|EGF55765.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
fluxus YIT 12057]
Length = 352
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 124/362 (34%), Positives = 192/362 (53%), Gaps = 19/362 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P RD +RL+V+H I + D+ + + D V
Sbjct: 1 MKLSQFKFKLPEEKIALHPAKYRDESRLLVLHRKTGE---IEHRMFKDILDYFDDKDVFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRRE----KEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
FN+TKV A+L G + R E +E++ L + W V P++ I+ G+ L+
Sbjct: 58 FNDTKVFPARLYGNKEKTGARIEVFLLRELNEELRL------WDVLVDPARKIRIGNKLY 111
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDA 174
F D + A VID + L F G E ++ + +G PLP I RP++
Sbjct: 112 FGDDDS---MVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYALGETPLPHSIV-NRPVEP 167
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D +Q+ +A+ +G+V APTA LHF+ L+ R+ GI ++TLH G G F + VED
Sbjct: 168 EDSERFQSIFARNEGAVTAPTASLHFSRELMKRMEIKGIDFAYITLHAGLGNFRDIDVED 227
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
H SE +++ + +N K ++ +VGTT +R +E+ + DG + + G+TN
Sbjct: 228 LTKHKTDSEQMIVNSEAVKIVNHAKDINKQVCAVGTTVMRAIESTVSTDGHLKEYEGWTN 287
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
FI P Y F + ++SNFH+P STLLM+V+AF G E+ + Y A+ YRF +YGD
Sbjct: 288 KFIFPPYDFTVANAMVSNFHMPLSTLLMIVAAFGGYEQVMEAYNVALKEDYRFGTYGDAM 347
Query: 355 LL 356
L+
Sbjct: 348 LI 349
>gi|167763958|ref|ZP_02436085.1| hypothetical protein BACSTE_02341 [Bacteroides stercoris ATCC
43183]
gi|167698074|gb|EDS14653.1| hypothetical protein BACSTE_02341 [Bacteroides stercoris ATCC
43183]
Length = 352
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 124/362 (34%), Positives = 190/362 (52%), Gaps = 19/362 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P RD +RLMV+H I + D+ + + D +
Sbjct: 1 MKLSQFKFKLPEEKIALHPTRYRDESRLMVLHRKTGE---IEHRMFKDILDYFDDKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRRE----KEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
FN+TKV A+L G + R E +E++ L + W V P++ I+ G+ L+
Sbjct: 58 FNDTKVFPARLYGNKEKTGARIEVFLLRELNEELRL------WDVLVDPARKIRIGNKLY 111
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDA 174
F D + A VID + L F G E ++ + +G PLP I RP++
Sbjct: 112 FGEDDS---MVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYALGETPLPHSII-NRPVEP 167
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D +Q+ +A+ +G+V APTA LHF+ L+ R+ GI ++TLH G G F + VED
Sbjct: 168 EDSERFQSIFARNEGAVTAPTASLHFSRELMKRMEIKGIDFAYITLHAGLGNFRDIDVED 227
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
H SE + + +N K ++ +VGTT +R +E+ + DG + + G+TN
Sbjct: 228 LTKHKTDSEQMIVTEEAVKVVNRAKDLNRQVCAVGTTVMRAIESTVSTDGHLKEYEGWTN 287
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
FI P Y F + ++SNFH+P STLLM+V+AF G E+ + Y A+ YRF +YGD
Sbjct: 288 KFIFPPYDFTVANAMVSNFHMPLSTLLMIVAAFGGYEQVMEAYNVALKEDYRFGTYGDAM 347
Query: 355 LL 356
L+
Sbjct: 348 LI 349
>gi|115379876|ref|ZP_01466938.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Stigmatella
aurantiaca DW4/3-1]
gi|115363113|gb|EAU62286.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Stigmatella
aurantiaca DW4/3-1]
Length = 331
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 126/327 (38%), Positives = 180/327 (55%), Gaps = 17/327 (5%)
Query: 43 DHL-VSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRRE----KEISCTLHMRVSPN 97
+HL +DLP+ L D +V N+ +VI A+L G + R E + + T+
Sbjct: 11 EHLRFADLPSLLRPGDVLVVNDARVIPARLLGAKVGTGGRVELLVVRPAASTMTSAALSL 70
Query: 98 -----SWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELER 152
W + SK +K G + F LE ++ + + G L+
Sbjct: 71 AAEAMDWICLGQASKGLKPGAQVAFGGGLVGEVLEGLGGGEYR----VRFQAPPGGSLQA 126
Query: 153 QISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIG 212
+ G +PLPPYI R+ DA D YQT YA+ G+VAAPTAGLHF+ + L + G
Sbjct: 127 LLEQAGRLPLPPYITRE--PDAADAERYQTLYARAPGAVAAPTAGLHFSEAIFEALDARG 184
Query: 213 IKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTS 272
++ VTL VG GTF+PV+ E+ D H MH E + TA +N+ ++ G R+V+VGTT
Sbjct: 185 VRRVTVTLDVGPGTFLPVREEELDRHKMHPERYGVPEQTAAEVNAARAEGRRVVAVGTTV 244
Query: 273 LRLLETAT-TEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIE 331
+R LE AT G++ +G T +FI PGY FR VD++++NFHLP+STL+MLVSA G E
Sbjct: 245 VRTLEAATDPATGLLRAGTGETVLFIRPGYAFRQVDLMLTNFHLPRSTLVMLVSALLGRE 304
Query: 332 ETKKMYQHAISHAYRFYSYGDTSLLFQ 358
T YQ A+ YRF+SYGD L+ +
Sbjct: 305 HTLAAYQEAVREGYRFFSYGDAMLVTE 331
>gi|251771668|gb|EES52243.1| Queuosine biosynthesis protein [Leptospirillum ferrodiazotrophum]
Length = 356
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 138/364 (37%), Positives = 193/364 (53%), Gaps = 24/364 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVV---HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
+++D++LP RI L P RD +RL VV P + S V+ LP+ L D +
Sbjct: 8 ARDYDYELPEERIRLVPPPRRDLSRLAVVPRRGDGGRPPFLASS--VAHLPSLLAPGDLL 65
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V N+++V+ A+ R + I + + K +K L F
Sbjct: 66 VANDSRVVPARTRAR-----TSRGRAIDLLVLGPFDSGTAGTVRFLGKGLKGEKRLALFG 120
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLV---GTIPLPPYIARKRPIDARD 176
G V+D E L FS E ++L+ G +PLPPYIAR+R D D
Sbjct: 121 GRG-------VLDGICYDEALECFSGEYRGEEALVALLEAQGEMPLPPYIARRRSADGSD 173
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YA++ GSVAAPTAGLH LL RL G++ VTLHVG GTF + +
Sbjct: 174 RERYQTVYARVPGSVAAPTAGLHLGEELLDRLREKGVERASVTLHVGVGTFRGLSEGPVE 233
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINP--WSGFTN 294
DH MH E + TA+A+ ++RGGR+V+VGTTSLR LE+A G I P +G+T
Sbjct: 234 DHRMHEEWYVVPRETAEAIARTRARGGRVVAVGTTSLRALESAFAL-GEIPPEGRAGWTR 292
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIE-ETKKMYQHAISHAYRFYSYGDT 353
+++ PGYRF A D L +NFH P+STLL+LV AF G + +++Y+ A+ + F SYGD
Sbjct: 293 LYVRPGYRFLAADALFTNFHTPRSTLLVLVDAFLGGDGRWREIYRRALEEGFFFLSYGDA 352
Query: 354 SLLF 357
L+
Sbjct: 353 LLIL 356
>gi|224537235|ref|ZP_03677774.1| hypothetical protein BACCELL_02112 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521158|gb|EEF90263.1| hypothetical protein BACCELL_02112 [Bacteroides cellulosilyticus
DSM 14838]
Length = 352
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 126/365 (34%), Positives = 191/365 (52%), Gaps = 19/365 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P RD +RLMV+H I D+ + + D +
Sbjct: 1 MKLSQFKFKLPEEKIALHPTKYRDESRLMVLHRKTGE---IEHKEFKDVLNYFDDKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRRE----KEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
FN+TKV A+L G + R E +E++ L + W V P++ I+ G+ L+
Sbjct: 58 FNDTKVFPARLYGNKEKTGARIEVFLLRELNEELRL------WDVLVDPARKIRIGNKLY 111
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDA 174
F D + A VID + L F G E ++ + +G PLP I RP++A
Sbjct: 112 FGDDDS---MVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYALGETPLPHSII-NRPVEA 167
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D +Q+ +A+ +G+V APTA LHF+ L+ RL GI ++TLH G G F + VED
Sbjct: 168 EDSERFQSIFARNEGAVTAPTASLHFSRELMKRLEIKGIDFAYITLHAGLGNFRDIDVED 227
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
H SE ++ +N K ++ +VGTT +R +E+ + DG + + G+TN
Sbjct: 228 LTKHKTDSEQMIVNEEAVGIVNRAKDLNRQVCAVGTTVMRAIESTVSTDGHLKAYEGWTN 287
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
FI P Y F + ++SNFH+P STLLM+V+AF G ++ + Y A+ YRF +YGD
Sbjct: 288 KFIFPPYDFTVANAMISNFHMPLSTLLMIVAAFGGYDQVMEAYNVALKEGYRFGTYGDAM 347
Query: 355 LLFQK 359
L+ K
Sbjct: 348 LITDK 352
>gi|113954197|ref|YP_729837.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus sp. CC9311]
gi|123132691|sp|Q0ICI5|QUEA_SYNS3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|113881548|gb|ABI46506.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase(Queuosine
biosynthesis protein queA) [Synechococcus sp. CC9311]
Length = 369
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 137/356 (38%), Positives = 195/356 (54%), Gaps = 11/356 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +D+ LP RIA PV PR ARL+VV P + V D L D +V
Sbjct: 7 LQLSSYDYVLPEDRIAQAPVEPRHDARLLVVPPAERSLSELRHQRVWDWQQELQPGDLLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L R + R W ARP+K ++ GD L +
Sbjct: 67 VNDTRVLKARLRVRRSGGGLGELLVLEPRGEGR-----WLCLARPAKRMRPGDQLWLEAL 121
Query: 121 DGQSRLEATVIDKWNTGEILLVF---SISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+ + A + + +G ++ F + + LE + G +PLPPYI R D+ D
Sbjct: 122 EQEPLSLAVLANDAASGGRIVQFPPDCVDALSLEGLLERYGEVPLPPYITRH---DSSDQ 178
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YA G+VAAPTAGLH + LL+ + G+ + VTLHVG GTF PV+ ED D
Sbjct: 179 ERYQTRYATRPGAVAAPTAGLHLSDALLAAIAERGVALAHVTLHVGLGTFRPVETEDLSD 238
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
+HSE + A +A+ + ++RGGR+++VGTTS+R LE A G + P G ++ I
Sbjct: 239 LTLHSEWVEVRAEVVEAVLACRARGGRVIAVGTTSVRALEAAAAGGGGLQPLKGPVDLVI 298
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
PGYRF+ V L++NFHLPKS+LL+LVSA G ++ ++Y AI YRFYSYGD
Sbjct: 299 QPGYRFQVVQGLLTNFHLPKSSLLLLVSALIGRDQLLQIYNAAIEEMYRFYSYGDA 354
>gi|78213525|ref|YP_382304.1| queuosine biosynthesis protein [Synechococcus sp. CC9605]
gi|123577715|sp|Q3AI33|QUEA_SYNSC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|78197984|gb|ABB35749.1| queuosine biosynthesis protein [Synechococcus sp. CC9605]
Length = 366
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 144/359 (40%), Positives = 207/359 (57%), Gaps = 21/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +D+ LPP RIA PV PR SARL++V P + V DL L D +V
Sbjct: 7 LQLSSYDYPLPPERIAQAPVEPRHSARLLMVPPQGEPSTDAAHGQVWDLLEQLQPGDLLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV-SPNSWSVYARPSKVIKKGDILHFFS 119
N+T+V+ A+L + R +S L + W ARP+K ++ GDIL
Sbjct: 67 VNDTRVLKARLA------VRRSGGGLSELLVLEPRGEGRWLCLARPAKRMRPGDILTI-- 118
Query: 120 QDGQSRLEATVI-DKWNTGEILLVFSISGIE---LERQISLVGTIPLPPYIARKRPIDAR 175
DG + + TV+ + +G L+ F + +E ++ VG +PLPPYI R P D++
Sbjct: 119 -DGSTSISLTVLAEDPASGGRLVQFPSDCRDAETIEGLLNDVGEVPLPPYIERHDPSDSQ 177
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
Y QT YA G+VAAPTAGLHF+ LL+ L G+ + +TLHVG GTF PV+ ED
Sbjct: 178 RY---QTRYADRPGAVAAPTAGLHFSDELLAGLQQKGVDLARITLHVGLGTFRPVETEDL 234
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE-TATTEDGIINPWSGFTN 294
+HSE ++D A + +V++ GR+++VGTTS+R LE A G++ P++G +
Sbjct: 235 TALELHSE--WVDVSPA-VVEAVQACRGRVIAVGTTSVRALEGAAQAHGGVLKPYTGPVD 291
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+ I PGYRF V L++NFHLPKS+LL+LVSA G E+ ++Y AI YRF+SYGD
Sbjct: 292 LVIQPGYRFAVVQGLLTNFHLPKSSLLLLVSALIGREKLLELYHEAIERDYRFFSYGDA 350
>gi|257439751|ref|ZP_05615506.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Faecalibacterium prausnitzii A2-165]
gi|257197771|gb|EEU96055.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Faecalibacterium prausnitzii A2-165]
Length = 274
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 113/265 (42%), Positives = 153/265 (57%), Gaps = 8/265 (3%)
Query: 93 RVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELER 152
+V + W A+P K ++ G + F G L A V + G + F L
Sbjct: 18 QVKGDQWECLAKPGKRMQPGTKVSF----GDGTLTAVVDETLEDGNKFVTFYYDTETLYE 73
Query: 153 QISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIG 212
++ G +PLPPYI ++ D YQT YAK GS AAPTAGLHFT L+ + S G
Sbjct: 74 KLDEFGKMPLPPYITKQ----LEDQSQYQTVYAKELGSAAAPTAGLHFTPELMDTIRSKG 129
Query: 213 IKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTS 272
+ + VTLHVG GTF PV+ ++ DH MHSE I TAQ + K+ G R+++VGTTS
Sbjct: 130 VGIAEVTLHVGLGTFRPVQEDEISDHKMHSEWYSISEETAQRIRETKAAGHRVIAVGTTS 189
Query: 273 LRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEE 332
R LE A + G I SG T+IF+ PG +F +D L++NFHLP+STL+MLVSA G E+
Sbjct: 190 CRTLEAAAAKYGEIKACSGNTSIFLYPGVKFNCIDGLITNFHLPESTLIMLVSALYGYEK 249
Query: 333 TKKMYQHAISHAYRFYSYGDTSLLF 357
T Y+ A+ YRF+S+GD L+
Sbjct: 250 TMAAYKVAVEEKYRFFSFGDAMLIL 274
>gi|260548786|ref|ZP_05823008.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter sp. RUH2624]
gi|260407954|gb|EEX01425.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter sp. RUH2624]
Length = 345
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 135/360 (37%), Positives = 193/360 (53%), Gaps = 24/360 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP IA P+ R ++RL+ +L DH+ +D+ D +V
Sbjct: 1 MQLSDFSFELPDELIARYPLESRSASRLL----HLDAKGQYHDHMFTDIIDLFEEGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G R I + ++ + + + S K G L F
Sbjct: 57 LNDTKVMKARLKGKRATG-----GAIEILVERMLNHTTAYCHIKSSNSPKAGAEL-FVGA 110
Query: 121 DGQSRLEATVIDKWNTGEILLV-FSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
D VI + + +V FS + + Q G +P+PPY R+ + D
Sbjct: 111 DN-----IPVIVRGRHENLFVVEFSQPILPVLEQ---YGQLPIPPYFNRE--AEEIDTER 160
Query: 180 YQTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT + + SVAAPTA LHF LL++L G+K FVTLHVGAGTFMPV+ +D +
Sbjct: 161 YQTVFHNPEKIASVAAPTASLHFDEELLAKLDQKGVKKTFVTLHVGAGTFMPVRTDDITN 220
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIF 296
H+MHSE + T + + K+RG ++++VGTT+ R LE+A G I W+G T IF
Sbjct: 221 HVMHSEWCDVPQETIDLILATKARGNKVIAVGTTATRALESAAQAHGGKIAAWTGDTQIF 280
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY F VD L++NFHLP+STLLMLVSA + Y+HA+ YRF+SYGD L+
Sbjct: 281 IYPGYEFCIVDRLITNFHLPESTLLMLVSALSNRDNILAAYEHAVKDRYRFFSYGDAMLI 340
>gi|94676614|ref|YP_589023.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Baumannia
cicadellinicola str. Hc (Homalodisca coagulata)]
gi|166216701|sp|Q1LSP1|QUEA_BAUCH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|94219764|gb|ABF13923.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Baumannia
cicadellinicola str. Hc (Homalodisca coagulata)]
Length = 353
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 141/366 (38%), Positives = 209/366 (57%), Gaps = 30/366 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP + IA P+ R + RL+ + + I ++ +D+ L+ D +V
Sbjct: 1 MHVADFSFNLPKNLIARYPLPERSTCRLLSLDGHSGA---IKHNVFTDILDQLSLGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSV-YARPSKVIKKGDILHFFS 119
FNNT+VI A+L G + I+ + E+ L RV N + + R SK K +L
Sbjct: 58 FNNTRVIPARLFGRK---ISGGKVEV---LVERVLDNQRVLAHIRASKTPKIDTLLLLGD 111
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLV----GTIPLPPYIARKRPIDAR 175
+ + A ++ + LL + +R I + G IPLP Y+ RP +
Sbjct: 112 NEN---IRAIIVARHQIWFELL------FDDQRDILTILNDAGHIPLPYYL--DRPDYSL 160
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y++ G++AAPTAGLHF LLS L G+++ F+TLHVG GTF P+KV+
Sbjct: 161 DRELYQTVYSQHPGAIAAPTAGLHFDQQLLSALRVKGVEMVFITLHVGTGTFQPIKVKKI 220
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-----TTEDGIINPWS 290
+ H M+SE + A+ + KSRG R+V+VGTTS+R LE+A ++ ++ P+
Sbjct: 221 EHHHMYSEYTEVPHTVVDAVIACKSRGNRVVAVGTTSVRSLESAIVSVSNSKHTMLAPFC 280
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G T+IFI PGYRFR +D L++NFHLP+ST +MLVSAF G + T Y+ A++ AYRF SY
Sbjct: 281 GETSIFIYPGYRFRVIDALITNFHLPQSTPIMLVSAFAGYQHTFNAYREAVNLAYRFLSY 340
Query: 351 GDTSLL 356
GD +
Sbjct: 341 GDAMFI 346
>gi|282855627|ref|ZP_06264941.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pyramidobacter piscolens W5455]
gi|282586557|gb|EFB91811.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pyramidobacter piscolens W5455]
Length = 349
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 128/362 (35%), Positives = 187/362 (51%), Gaps = 28/362 (7%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +D++LPP IA +P PRD RL+ V + + H D+ +L D +V N
Sbjct: 9 INTYDYELPPELIAQKPAEPRDRCRLLAV--RRADGKLFHQHF-HDILQWLRPGDVLVRN 65
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+V+ A++ GV+ + EI S W RP + + +G
Sbjct: 66 DTRVMAARVEGVKVN--GSAQAEILLLRPEDDSEKCWEALVRPGRKLPEG---------A 114
Query: 123 QSRLEATVID-----KWNTGEILLVFSISGIELERQISLVGTIPLPPYIARK--RPIDAR 175
+ RL+ V+ K G ++F + ++ G++PLPPYI + RP
Sbjct: 115 RVRLDGDVVVTIGAVKSEDGVRRVIFP-ADCDVRALAEANGSMPLPPYIHERSSRP---- 169
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
DYQT YAK S AAPTAGLHFT LL + G+ + +TL VG GTF PVK ED
Sbjct: 170 --EDYQTVYAKDPRSAAAPTAGLHFTRELLREVAGRGVTIADITLEVGLGTFRPVKTEDI 227
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
H MHSE + + K GGR++++GTT +R LE + P T +
Sbjct: 228 RRHHMHSEHCVVPQDAYDKIVMAKKNGGRVIALGTTVVRTLEGMAATSAGLRPGVLETGL 287
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PG++++ VD L++NFHLPKSTL+MLV+AF G + T K Y A+ YRF+S+GD +
Sbjct: 288 FIYPGFKYKVVDALITNFHLPKSTLMMLVAAFAGYDLTMKAYAEAVKERYRFFSFGDAMM 347
Query: 356 LF 357
+
Sbjct: 348 IM 349
>gi|332040561|gb|EGI76937.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Hylemonella gracilis ATCC 19624]
Length = 389
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 147/366 (40%), Positives = 199/366 (54%), Gaps = 17/366 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF LPP IA P R ++RL+ L + D + +LP L D +VFN
Sbjct: 33 LSDFDFALPPELIAQHPAPERSASRLLDGRDARPGALPV-DRIFRELPGLLQPGDLLVFN 91
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFFSQ 120
+TKV+ A+L G + I L + + V A KV KK +
Sbjct: 92 DTKVVKARLFGNKPAPARGATSPIGGKLELLIERVLTGHEVVAH-MKVSKKPAVGTVLQM 150
Query: 121 DGQSRLEATVIDKW--NTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
G A ++ +W G++ L FS +L Q G +PLPPYI D D
Sbjct: 151 AGG--YTAELLGRWPDEDGQLFRLRFSDEPHKLMEQH---GHVPLPPYINHSDNDD--DV 203
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT +A G+ AAPTA LHF +L+ L + G+K VTLHVGAGTF PVK E+ +
Sbjct: 204 ARYQTVFAAKPGAAAAPTAALHFDEAVLAALDARGVKRANVTLHVGAGTFSPVKTENLAE 263
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDG---IINPWSGFTN 294
H MH E + A T QA+ ++ GGRIV+VGTT++R LE+ G SG T+
Sbjct: 264 HRMHREWYDVPAATQQAIRDTQANGGRIVAVGTTTIRTLESWARSAGPGLSGGQTSGDTD 323
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFITPG+ F+ D+L++NFHLPKSTL+MLVSAF G E +Y+HAI+ YRF+SYGD
Sbjct: 324 IFITPGFEFKVADLLITNFHLPKSTLMMLVSAFAGYEHIMALYRHAIAQRYRFFSYGDAM 383
Query: 355 LLFQKR 360
+L + R
Sbjct: 384 VLERVR 389
>gi|298372269|ref|ZP_06982259.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein QueA) [Bacteroidetes oral taxon 274
str. F0058]
gi|298275173|gb|EFI16724.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein QueA) [Bacteroidetes oral taxon 274
str. F0058]
Length = 411
Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 147/409 (35%), Positives = 210/409 (51%), Gaps = 68/409 (16%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+ LP RIA P+ RD++ L+ I +DLP L+S D +VFN
Sbjct: 10 INDYDYPLPSERIARYPLPERDASMLLFFDGK-----DIEKKGFADLPELLDSKDFLVFN 64
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIK---------KGD 113
NTKVI A+L RF E EI C + S S+ + S V K K +
Sbjct: 65 NTKVIHARL---RFVKSTGAEIEIFCLEPLLPSDYQLSLSSVNSCVWKVMVGNLRRWKSE 121
Query: 114 ILHFFSQ-DGQ-SRLEATVIDKWNT--GEILLVFSISGIELERQISLVGTIPLPPYIARK 169
LH + DG+ +E + N E+ + S I + ++ +G +P+PPY+ RK
Sbjct: 122 TLHQTADIDGKRCNIEVRYRNPLNNMAHEVEFAWDNSDITFAQILAHLGELPIPPYLNRK 181
Query: 170 RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
++ D + YQTTY+K+ GSVAAPTAGLHFT +L RL S GI +TLH+GAGTF P
Sbjct: 182 --TESADSLTYQTTYSKVLGSVAAPTAGLHFTDRILQRLTSKGIDSTEITLHIGAGTFQP 239
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------ATT 281
VK ++ +H MH+E+ A +L + IV+VGTTS+R LE+ A
Sbjct: 240 VKTDNIAEHQMHTEVF---AVGLSSLELIADNIDSIVAVGTTSVRTLESLYYIGCHIAKN 296
Query: 282 EDG---IINPWSGFTN-------------------------------IFITPGYRFRAVD 307
E ++ W + N I I PG++FR V+
Sbjct: 297 EPSPVFEVSQWEAYENNGCEMSPRKSIETIIEYMRDNKLDFIVAKTQIMIVPGFKFRIVN 356
Query: 308 ILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
L++NFH P+STLL+LVSAF G + +K+Y A+ H +RF SYGD+SLL
Sbjct: 357 KLITNFHQPRSTLLLLVSAFVGDDNRRKIYDFALGHNFRFLSYGDSSLL 405
>gi|260654964|ref|ZP_05860452.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Jonquetella
anthropi E3_33 E1]
gi|260630279|gb|EEX48473.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Jonquetella
anthropi E3_33 E1]
Length = 361
Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 131/354 (37%), Positives = 191/354 (53%), Gaps = 18/354 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
V+ + +DLP +IA PV PRDS RLM + + + DL L +D +V N
Sbjct: 25 VQTYQYDLPQEQIAQVPVSPRDSCRLMTLDRRTG---RVGHKVFRDLLDLLRPDDLLVRN 81
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+V+ +L G + E+ L + N+W RP + + G + D
Sbjct: 82 DTRVLAGRLTGRKISGT----AEVEVLLLRQEKENTWQALVRPGRRLPPGTEV-----DL 132
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
Q + + G L+ FS G++++ L G +PLPPYI + + DYQT
Sbjct: 133 QGAIAVVGPSISDDGVRLVTFS-EGLDVKVWCDLHGQMPLPPYITSRESKND----DYQT 187
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YAK S AAPTAGLHFT LL+ + G+++ VTL VG GTF PV D H+MHS
Sbjct: 188 VYAKDANSAAAPTAGLHFTEGLLAAIREKGVQILDVTLEVGLGTFRPVSEPDIRRHVMHS 247
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E + A T +A+ + KS G R+++VGTT +R LE + + + W T +FI PG+
Sbjct: 248 ERCRVPAATLEAIRAAKSTGRRVIAVGTTVVRTLEGLWSTGKVDDRWFE-TQLFIYPGFH 306
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
++ VD L++NFHLP STL+MLVSAF G E Y+ A++ YRF+S+GD +
Sbjct: 307 YQVVDGLITNFHLPGSTLMMLVSAFGGYEPVMAAYREAVAKGYRFFSFGDAMFI 360
>gi|24217263|ref|NP_714746.1| queuosine biosynthesis protein [Leptospira interrogans serovar Lai
str. 56601]
gi|24202323|gb|AAN51761.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Leptospira
interrogans serovar Lai str. 56601]
Length = 352
Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 133/359 (37%), Positives = 193/359 (53%), Gaps = 22/359 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+KEF+F L RIA PV RD +RLMV+ N + S+ ++ ++L D +V N
Sbjct: 6 LKEFEFILSEERIARYPVANRDESRLMVLDVNTGT--ISSEPSFKNVISYLKEGDLLVAN 63
Query: 63 NTKVITAQLNGVRFCHINRREK-EISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
+TKV R ++ + K I + + + W R SK +K G+ L D
Sbjct: 64 HTKV------SKRRVYLRSKTKARIHEAMFLEEKESLWKCKIRNSKKLKMGEQLC----D 113
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+++ I++ E + + ++ E +G IP+PPY+ KR D+ D + YQ
Sbjct: 114 EKTKQILFTIER-KEEEFVFLKPKHSLQ-EEDFQQIGEIPIPPYL--KRNADSEDEIRYQ 169
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +AK GSVAAPTAGLHF+ N+ L I+ + L VG GTF P+ E+ + +H
Sbjct: 170 TLFAKTPGSVAAPTAGLHFSENIFKTLKEKKIQFCTLELKVGYGTFQPLTEENFQNQKLH 229
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWS---GFTNIFIT 298
E F++ +AQ LN K RI S+GTT+LR LE+A D + N + G T +FI
Sbjct: 230 KEEFFLEESSAQMLNLAKKERRRIFSIGTTTLRALESAY--DPVTNTFCSGPGVTELFIL 287
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
P R ++ L++NFHLP S+LL+LVSAF G E K YQ AI +RFYSYGD L+
Sbjct: 288 PENRLQSCQGLITNFHLPGSSLLLLVSAFAGKELILKAYQKAIQEKFRFYSYGDAMLIL 346
>gi|291278524|ref|YP_003495359.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Deferribacter desulfuricans SSM1]
gi|290753226|dbj|BAI79603.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Deferribacter desulfuricans SSM1]
Length = 341
Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 131/373 (35%), Positives = 194/373 (52%), Gaps = 57/373 (15%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +DF+ + IA P RD +RL+VV+ + L D D+ F + N +V N
Sbjct: 6 INRYDFEFDENLIAQYPEKKRDESRLLVVNRQTNKLL---DKRFKDIVDFFDDNMFLVLN 62
Query: 63 NTKVITA------------------QLNGVRFCHINRREKEISCTLHMRVSPNSWSVYAR 104
NTKV+ A QL+G RF + + + L++ N + ++
Sbjct: 63 NTKVLNARLFAKKESGGEVEIFLLEQLDGKRFKALLGGKWKSEGYLYI----NEYKLFVS 118
Query: 105 PSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPP 164
+D + + ID N EI+ + G +PLPP
Sbjct: 119 --------------KRDDEGIVTVDFIDA-NPFEIMDKY--------------GHVPLPP 149
Query: 165 YIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
YI KR + D Y T ++K GSVAAPTAGLHFT + +L G++++ +TL+VG
Sbjct: 150 YI--KREDNELDRERYNTVFSKKIGSVAAPTAGLHFTEEIFDKLKEKGVEIFEITLNVGL 207
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDG 284
GTF PVK E +DH MH E I+ A +N +K G ++V+VGTT +R LE+A ++ G
Sbjct: 208 GTFRPVKTEFIEDHKMHKESFSIEKSVADKINKLKKDGKKLVAVGTTVVRALESAASQFG 267
Query: 285 IINPW-SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISH 343
I P + +T++FI GY+F+ VD +++NFHLPKSTL +LV AF G + KK Y HA+
Sbjct: 268 EITPCENAYTDLFIREGYQFKVVDKMITNFHLPKSTLFILVCAFGGYDLMKKAYAHAVKD 327
Query: 344 AYRFYSYGDTSLL 356
YRF+SYGD +
Sbjct: 328 RYRFFSYGDAMFI 340
>gi|150009009|ref|YP_001303752.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Parabacteroides distasonis ATCC 8503]
gi|255014841|ref|ZP_05286967.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 2_1_7]
gi|256840989|ref|ZP_05546496.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Parabacteroides sp. D13]
gi|262383900|ref|ZP_06077036.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 2_1_33B]
gi|298375758|ref|ZP_06985714.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 3_1_19]
gi|301312060|ref|ZP_07217982.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 20_3]
gi|166216734|sp|A6LEL6|QUEA_PARD8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|149937433|gb|ABR44130.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Parabacteroides distasonis ATCC 8503]
gi|256736832|gb|EEU50159.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Parabacteroides sp. D13]
gi|262294798|gb|EEY82730.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 2_1_33B]
gi|298266795|gb|EFI08452.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 3_1_19]
gi|300830162|gb|EFK60810.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 20_3]
Length = 349
Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 128/363 (35%), Positives = 187/363 (51%), Gaps = 20/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP IAL P RD +RLMVVH + I D+ + D +
Sbjct: 1 MKLSKFKFNLPSELIALHPAKNRDESRLMVVHRDTG---EIEHREFKDILDYYGKGDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRRE----KEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
FNNTKV A+L G + R E +E++ L + W V P++ I+ G+ L+
Sbjct: 58 FNNTKVFPARLYGNKEKTGARIEVFLLRELNEDLRL------WDVLVDPARKIRIGNKLY 111
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDA 174
F D + A VID + L F G E ++ + +G PLP YI +R ++
Sbjct: 112 FGEDDS---MVAEVIDNTTSRGRTLRFLYDGNHDEFKKALYALGETPLPKYI--EREVEP 166
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D YQ +A +G+V AP AGLHF+ L+ RL + F+TLH G G F + VED
Sbjct: 167 EDEDRYQNIFAAEEGAVVAPAAGLHFSRELMKRLEIKDCQFAFLTLHSGLGNFREIDVED 226
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
H M SE ++A +N K G ++ +VGT+ +R +ETA + DG + + G+TN
Sbjct: 227 LTKHKMDSEQMVVNADVVDIVNKGKDEGHKVCAVGTSVMRAIETAVSTDGHLKEFEGWTN 286
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
FI P Y F +++NFH+P STLLM+ ++F G E Y A+ YRF +YGD
Sbjct: 287 KFIFPPYDFSVATSMVTNFHMPLSTLLMMTASFGGYELIMDAYDIALKEKYRFGAYGDAM 346
Query: 355 LLF 357
L+
Sbjct: 347 LIL 349
>gi|193216172|ref|YP_001997371.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Chloroherpeton thalassium ATCC 35110]
gi|238692714|sp|B3QXK9|QUEA_CHLT3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|193089649|gb|ACF14924.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Chloroherpeton thalassium ATCC 35110]
Length = 346
Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 130/359 (36%), Positives = 193/359 (53%), Gaps = 15/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M + +F + LP + +A P PRDS +LMV+ +DH SDL + D +
Sbjct: 1 MRLSDFRYTLPKTAVAEYPSEPRDSCKLMVLDRRKKT----TDHKQFSDLLDYFKKGDVL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V N+TKV A+L G + + E+ + W V P++ ++ G+ ++F
Sbjct: 57 VLNDTKVFPARLYGNK--EKTSAKIEVFLLRELNKQAGLWDVLVEPARKVRVGNKIYF-- 112
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ L A V+D + + F I++ + VG +P+PPYI KR + D
Sbjct: 113 ---PNDLVAEVVDNTTSRGRTIRFLNPDIDIFSIVEKVGQMPIPPYI--KRDPEEEDKER 167
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A+I G+V AP AGLHFT+ LL + G+++ +TLH G TF V+VED H
Sbjct: 168 YQTVFARIPGAVVAPLAGLHFTNPLLKAIQDKGVEIISLTLHPGLSTFREVEVEDISKHK 227
Query: 240 MHSEIGFIDAPTAQALNSVKSR-GGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
M SE + A+ +NS+K + GR+ +VGTT R LE T +G I G+T+ +I
Sbjct: 228 MDSEYYNVPYSCAKVINSIKEKKSGRVFAVGTTVCRALEANATVEGRIKFGEGWTDKYIY 287
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
P Y F+ VD L++NFH P+STLLMLVSAF + K Y+ A+ Y+F YGD L+F
Sbjct: 288 PPYDFKVVDALITNFHQPESTLLMLVSAFAEHDFLMKNYKLALKSDYKFLGYGDAMLIF 346
>gi|160888113|ref|ZP_02069116.1| hypothetical protein BACUNI_00521 [Bacteroides uniformis ATCC 8492]
gi|270295140|ref|ZP_06201341.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. D20]
gi|317478138|ref|ZP_07937313.1| tRNA ribosyltransferase-isomerase [Bacteroides sp. 4_1_36]
gi|156862424|gb|EDO55855.1| hypothetical protein BACUNI_00521 [Bacteroides uniformis ATCC 8492]
gi|270274387|gb|EFA20248.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. D20]
gi|316905736|gb|EFV27515.1| tRNA ribosyltransferase-isomerase [Bacteroides sp. 4_1_36]
Length = 352
Score = 209 bits (532), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 123/362 (33%), Positives = 191/362 (52%), Gaps = 19/362 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P RD +RL+V+H I + D+ + + D +
Sbjct: 1 MKLSQFKFKLPEEKIALHPTKYRDESRLLVLHRKTGE---IEHKMFKDVLDYFDDKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRRE----KEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
FN+TKV A+L G + R E +E++ L + W V P++ I+ G+ L+
Sbjct: 58 FNDTKVFPARLYGNKEKTGARIEVFLLRELNEELRL------WDVLVDPARKIRIGNKLY 111
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDA 174
F D + A VID + L F G E ++ + +G PLP I RP++
Sbjct: 112 FGDDDS---MVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYALGETPLPHSII-NRPVEP 167
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D +Q+ +A+ +G+V APTA LHF+ L+ R+ GI ++TLH G G F + VED
Sbjct: 168 DDAERFQSIFARNEGAVTAPTASLHFSRELMKRMEIKGIDFAYITLHAGLGNFRDIDVED 227
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
H SE ++ + +N K ++ +VGTT +R +E+ + DG + + G+TN
Sbjct: 228 LTKHKTDSEQMIVNEEAVRIVNHAKDLNRQVCAVGTTVMRAIESTVSTDGHLKEYEGWTN 287
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
FI P Y F + ++SNFH+P STLLM+V+AF G E+ + Y A+ YRF +YGD
Sbjct: 288 KFIFPPYDFTVANAMISNFHMPLSTLLMIVAAFGGYEQVMEAYNVALKEEYRFGTYGDAM 347
Query: 355 LL 356
L+
Sbjct: 348 LI 349
>gi|220903425|ref|YP_002478737.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfovibrio desulfuricans subsp. desulfuricans str.
ATCC 27774]
gi|219867724|gb|ACL48059.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfovibrio desulfuricans subsp. desulfuricans str.
ATCC 27774]
Length = 365
Score = 209 bits (532), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 135/365 (36%), Positives = 199/365 (54%), Gaps = 17/365 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+++ + FDLP ++A P R +RL+V+ N L + DLP L ++
Sbjct: 8 FLLQSYRFDLPQEQVAQFPPEERGGSRLLVMPRN--GELTLRHENFCDLPDCLPEGALLI 65
Query: 61 FNNTKVITAQLNGVRFCHINRRE----KEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
NN++V+ A+L G R + E + + + + +YA +++ G +
Sbjct: 66 ANNSRVLQARLLGTRSTG-GKVEFLLLTPLPLVIERARADKNGGLYAEAEGLVRSGGSIR 124
Query: 117 FFSQDG-QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
G + + TV++ G+ + S +G +L + G IPLPPYI KRP
Sbjct: 125 EGESFGFGAGIGVTVLESGPFGQRRVRLSWTG-DLAAAFAATGHIPLPPYI--KRPDAED 181
Query: 176 DYVDYQTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT Y++ GSVAAPTAGLHFT L RL + G + VTL+VG GTF PV+
Sbjct: 182 DLSRYQTVYSRQDKTGSVAAPTAGLHFTPPLRERLAAKGFEWAEVTLYVGYGTFSPVRSS 241
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGR--IVSVGTTSLRLLETATTEDGIINPWSG 291
D H MH E +I+ P A AL ++R + +++VGTTSLR LE G + P++G
Sbjct: 242 DIRSHRMHRE--YIEVPEATALAIARAREEKRPVIAVGTTSLRTLEGVAELCGRVQPYTG 299
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
+T+IF+ PG FR D L++NFHLP+S+LLMLVSAF G + Y AI++ YRF+SYG
Sbjct: 300 WTDIFLYPGRPFRVADGLVTNFHLPESSLLMLVSAFAGRKRVLDAYAEAIANNYRFFSYG 359
Query: 352 DTSLL 356
D L+
Sbjct: 360 DAMLI 364
>gi|255321125|ref|ZP_05362291.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter radioresistens SK82]
gi|255301679|gb|EET80930.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter radioresistens SK82]
Length = 346
Score = 209 bits (531), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 134/359 (37%), Positives = 194/359 (54%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP IA P+ R ++RL+ +L+ SD +D+ D +V
Sbjct: 1 MQLSDFSFNLPDELIARYPLAQRSASRLL----HLNSEGQYSDRHFTDILELFEPGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G R + + + + S K G L
Sbjct: 57 LNDTKVMKARLKGRRATG-----GAVEILVERIFDQTIAHCHIKASNSPKAGAELFI--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++ TV + E L V S L+ + G +P+PPY R+ +A D Y
Sbjct: 109 -GADEVKVTVQGRH---ENLFVVEFSQPILQV-LDQYGQLPIPPYFNRE--AEAIDSERY 161
Query: 181 QTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
QT + + SVAAPTA LHF LL++L G++ FVTLHVGAGTF+PV+ D ++H
Sbjct: 162 QTVFHDPEKIASVAAPTASLHFDEVLLNKLSEKGVQQAFVTLHVGAGTFLPVRSIDIENH 221
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFI 297
IMHSE + T + + V++RG ++++VGTT+ R LE+A +G I W+G T IFI
Sbjct: 222 IMHSEWCEVPENTVELIKQVQARGNKVIAVGTTATRALESAAQAHNGKIEAWTGDTQIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+F VD L++NFHLP+STLLMLVSA + Y+HA+ YRF+SYGD L+
Sbjct: 282 YPGYQFCVVDRLITNFHLPESTLLMLVSALSTRDYILAAYEHAVREHYRFFSYGDAMLI 340
>gi|262380186|ref|ZP_06073341.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter radioresistens SH164]
gi|262298380|gb|EEY86294.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter radioresistens SH164]
Length = 346
Score = 209 bits (531), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 134/359 (37%), Positives = 194/359 (54%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP IA P+ R ++RL+ +L+ SD +D+ D +V
Sbjct: 1 MQLSDFSFNLPDELIARYPLAQRSASRLL----HLNSEGQYSDRHFTDILELFEPGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G R + + + + S K G L
Sbjct: 57 LNDTKVMKARLKGRRAT-----GGAVEILVERIFDQTIAHCHIKASNSPKAGAELFI--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++ TV + E L V S L+ + G +P+PPY R+ +A D Y
Sbjct: 109 -GADEVKVTVQGRH---ENLFVVEFSQPILQV-LDQHGQLPIPPYFNRE--AEAIDSERY 161
Query: 181 QTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
QT + + SVAAPTA LHF LL++L G++ FVTLHVGAGTF+PV+ D ++H
Sbjct: 162 QTVFHDPEKIASVAAPTASLHFDEVLLNKLSEKGVQQAFVTLHVGAGTFLPVRSIDIENH 221
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFI 297
IMHSE + T + + V++RG ++++VGTT+ R LE+A +G I W+G T IFI
Sbjct: 222 IMHSEWCEVPENTVELIKQVQTRGNKVIAVGTTATRALESAAQAHNGKIEAWTGDTQIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+F VD L++NFHLP+STLLMLVSA + Y+HA+ YRF+SYGD L+
Sbjct: 282 YPGYQFCVVDRLITNFHLPESTLLMLVSALSTRDHILAAYEHAVRKHYRFFSYGDAMLI 340
>gi|45655741|ref|YP_003550.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
gi|45602712|gb|AAS72187.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
Length = 352
Score = 208 bits (530), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 133/359 (37%), Positives = 193/359 (53%), Gaps = 22/359 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+KEF+F L RIA PV RD +RLMV+ N + S+ ++ ++L D +V N
Sbjct: 6 LKEFEFILSEERIARYPVANRDESRLMVLDVNTGT--ISSEPSFKNVISYLKEGDLLVAN 63
Query: 63 NTKVITAQLNGVRFCHINRREK-EISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
+TKV R ++ + K I + + + W R SK +K G+ L D
Sbjct: 64 HTKV------SKRRVYLRSKTKARIHEAMFLEEKESLWKCKIRNSKKLKMGEQLC----D 113
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+++ I++ E + + ++ E +G IP+PPY+ KR D+ D + YQ
Sbjct: 114 EKTKQILFTIER-KEEEFVFLKPKHSLQ-EEDFQQIGEIPIPPYL--KRNADSEDEIRYQ 169
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +AK GSVAAPTAGLHF+ N+ L I+ + L VG GTF P+ E+ + +H
Sbjct: 170 TLFAKTPGSVAAPTAGLHFSENIFKTLKEKKIQFCTLELKVGYGTFQPLTEENFQNQKLH 229
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWS---GFTNIFIT 298
E F++ +AQ LN K RI S+GTT+LR LE+A D + N + G T +FI
Sbjct: 230 REDFFLEESSAQMLNLAKKERRRIFSIGTTTLRALESAY--DPVTNTFCSGPGVTELFIL 287
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
P R ++ L++NFHLP S+LL+LVSAF G E K YQ AI +RFYSYGD L+
Sbjct: 288 PENRLQSCQGLITNFHLPGSSLLLLVSAFAGKELILKAYQKAIQEKFRFYSYGDAMLIL 346
>gi|239905378|ref|YP_002952117.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Desulfovibrio magneticus RS-1]
gi|239795242|dbj|BAH74231.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Desulfovibrio magneticus RS-1]
Length = 370
Score = 208 bits (530), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 139/369 (37%), Positives = 195/369 (52%), Gaps = 27/369 (7%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLV-SDLPAFLNSNDAIV 60
++ + F+LP + IA RP RD+ RLMV+ DH V +DLP L +V
Sbjct: 16 LLASYHFELPDALIADRPCEVRDACRLMVLDRAAGS----LDHRVFTDLPDLLPEGALLV 71
Query: 61 FNNTKVITAQLNGVR----------FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIK 110
NNTKV +L G R + + E +P + + R S+ +
Sbjct: 72 VNNTKVAPVRLLGKRPTGGAAEFLLLTPVALLKPETDPATGWTSAPAAGLL--RVSRPPR 129
Query: 111 KGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKR 170
GD + F L T + + G + S G L ++ +G +PLPPYI +R
Sbjct: 130 PGDRIDFAPD-----LAVTAVSRGAFGHTEVTLSWRG-ALPEILTRIGHVPLPPYI--RR 181
Query: 171 PIDARDYVDYQTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFM 228
DA D YQT YA+ GS AAPTAGLHFT LL+RL G ++ VT HVG GTF
Sbjct: 182 ADDAADRETYQTVYARDDKLGSAAAPTAGLHFTEELLARLAGRGFRLTAVTCHVGLGTFS 241
Query: 229 PVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINP 288
PV+VED DH MH E + A A++ K+ G +++VGTT+ R LE A E G
Sbjct: 242 PVRVEDLRDHAMHQEWIEVSPEAASAVSRAKAEGRPVIAVGTTAARTLEGAVREAGAFGA 301
Query: 289 WSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
++GFT+IFI PG+RF VD +++NFHLP S+L+++++A G E Y A++ YRF+
Sbjct: 302 FAGFTDIFIRPGHRFAVVDGMVTNFHLPGSSLVIMLAALAGRESILAAYGQAVASGYRFF 361
Query: 349 SYGDTSLLF 357
SYGD L+
Sbjct: 362 SYGDAMLVL 370
>gi|260436284|ref|ZP_05790254.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus sp. WH 8109]
gi|260414158|gb|EEX07454.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus sp. WH 8109]
Length = 366
Score = 208 bits (530), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 143/358 (39%), Positives = 203/358 (56%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +D+ LPP RIA PV PR SARL++V P + V DL L D +V
Sbjct: 7 LQLSSYDYPLPPERIAQAPVEPRHSARLLMVPPQEEPSTDAAHGQVWDLIEQLQPGDLLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV-SPNSWSVYARPSKVIKKGDILHFFS 119
N+T+V+ A+L + R +S L + W ARP+K ++ GD L
Sbjct: 67 VNDTRVLKARLA------VRRSGGGLSELLVLEPRGEGRWLCLARPAKRMRPGDSLTI-- 118
Query: 120 QDGQS-RLEATVIDKWNTGEILLVFSI--SGIELERQISLVGTIPLPPYIARKRPIDARD 176
DG S L D + G ++ S +E ++ VG +PLPPYI R P D++
Sbjct: 119 -DGTSISLTVLAEDPASGGRVVQFPSDCRDAETIEGLLNDVGEVPLPPYIERHDPSDSQR 177
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
Y QT YA G+VAAPTAGLHF+ LL+ L G+ + +TLHVG GTF PV+ ED
Sbjct: 178 Y---QTRYADRPGAVAAPTAGLHFSDELLAGLQQKGVDLARITLHVGLGTFRPVETEDLT 234
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE-TATTEDGIINPWSGFTNI 295
+HSE ++D A + +V++ GR+++VGTTS+R LE A G++ P++G N+
Sbjct: 235 ALELHSE--WVDVSPA-VVEAVQACRGRVIAVGTTSVRALEGAAQAHGGVLKPYTGPVNL 291
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
I PGY+F+ + L++NFHLPKS+LL+LVSA G E K+Y AI +YRF+SYGD
Sbjct: 292 VIQPGYQFKVIQALLTNFHLPKSSLLLLVSALIGRETLLKLYAEAIERSYRFFSYGDA 349
>gi|213023923|ref|ZP_03338370.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 289
Score = 208 bits (530), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 101/205 (49%), Positives = 141/205 (68%), Gaps = 4/205 (1%)
Query: 154 ISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGI 213
++ +G +PLPPYI RP + D YQT Y++ G+VAAPTAGLHF LL+ L G+
Sbjct: 76 LNAIGHMPLPPYI--DRPDEDADRELYQTVYSEKPGAVAAPTAGLHFDEPLLAALREKGV 133
Query: 214 KVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSL 273
++ FVTLHVGAGTF PV+V+ +DHIMHSE + A+ + K+RG R+++VGTTS+
Sbjct: 134 EMAFVTLHVGAGTFQPVRVDTIEDHIMHSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSV 193
Query: 274 RLLETA--TTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIE 331
R LE+A + +I P+ G T IFI PGY+++ +D L++NFHLP+STL+MLVSAF G +
Sbjct: 194 RSLESAAQAAKSDLIEPFFGDTQIFIYPGYQYKVIDALITNFHLPESTLIMLVSAFAGYQ 253
Query: 332 ETKKMYQHAISHAYRFYSYGDTSLL 356
T Y+ A+ YRF+SYGD +
Sbjct: 254 HTMNAYKTAVEQKYRFFSYGDAMFI 278
>gi|294651474|ref|ZP_06728787.1| queuine tRNA-ribosyltransferase [Acinetobacter haemolyticus ATCC
19194]
gi|292822624|gb|EFF81514.1| queuine tRNA-ribosyltransferase [Acinetobacter haemolyticus ATCC
19194]
Length = 349
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 136/359 (37%), Positives = 195/359 (54%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F FDLP IA P+ R ++RL+ ++ DH +D+ L D +V
Sbjct: 6 MQLSDFSFDLPDELIAPYPLESRSASRLL----HIDAQGHYHDHAFTDILDLLEEGDLLV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G R I + + ++ + + S K G L+
Sbjct: 62 LNDTKVMKARLKGKRAT-----GGAIEVLVERILDTHTAHCHIKSSNSPKAGAELYI--- 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ + TV + E L V S L + G +P+PPY R+ + D Y
Sbjct: 114 -GEDAVPVTVQGRH---ENLFVVKFSQPILSV-LDQYGQLPIPPYFNRE--AEEIDTERY 166
Query: 181 QTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
QT + + SVAAPTA LHF +LL +L + G++ FVTLHVGAGTFMPV+ D +H
Sbjct: 167 QTVFHDPEKIASVAAPTASLHFDQSLLEKLATKGVQKTFVTLHVGAGTFMPVRTTDITNH 226
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFI 297
IMHSE + T + + K+RG ++++VGTT+ R LE+A + G I W+G T IFI
Sbjct: 227 IMHSEWCDVPQATIDLILATKARGNKVIAVGTTATRALESAAQANQGQIAAWTGDTQIFI 286
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+F VD L++NFHLP+STLLMLVSA + Y+HA+ YRF+SYGD L+
Sbjct: 287 YPGYQFCIVDRLITNFHLPESTLLMLVSALSNRDNILAAYKHAVEQRYRFFSYGDAMLI 345
>gi|213609615|ref|ZP_03369441.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhi str. E98-2068]
Length = 244
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 101/205 (49%), Positives = 141/205 (68%), Gaps = 4/205 (1%)
Query: 154 ISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGI 213
++ +G +PLPPYI RP + D YQT Y++ G+VAAPTAGLHF LL+ L G+
Sbjct: 31 LNAIGHMPLPPYI--DRPDEDADRELYQTVYSEKPGAVAAPTAGLHFDEPLLAALREKGV 88
Query: 214 KVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSL 273
++ FVTLHVGAGTF PV+V+ +DHIMHSE + A+ + K+RG R+++VGTTS+
Sbjct: 89 EMAFVTLHVGAGTFQPVRVDTIEDHIMHSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSV 148
Query: 274 RLLETA--TTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIE 331
R LE+A + +I P+ G T IFI PGY+++ +D L++NFHLP+STL+MLVSAF G +
Sbjct: 149 RSLESAAQAAKSDLIEPFFGDTQIFIYPGYQYKVIDALITNFHLPESTLIMLVSAFAGYQ 208
Query: 332 ETKKMYQHAISHAYRFYSYGDTSLL 356
T Y+ A+ YRF+SYGD +
Sbjct: 209 HTMNAYKTAVEQKYRFFSYGDAMFI 233
>gi|218262342|ref|ZP_03476847.1| hypothetical protein PRABACTJOHN_02521 [Parabacteroides johnsonii
DSM 18315]
gi|218223437|gb|EEC96087.1| hypothetical protein PRABACTJOHN_02521 [Parabacteroides johnsonii
DSM 18315]
Length = 349
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 126/363 (34%), Positives = 188/363 (51%), Gaps = 20/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP IAL P RD +RLMVV+ I + DL ++ D +
Sbjct: 1 MKLSKFKFNLPQELIALHPAKNRDESRLMVVNRKTG---EIEHKVFKDLLSYFGEKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRRE----KEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
FNNTKV A+L G + R E +E++ L + W V P++ I+ G+ L+
Sbjct: 58 FNNTKVFPARLYGNKEKTGARIEVFLLRELNEDLRL------WDVLVDPARKIRIGNKLY 111
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDA 174
F D + A VID + L F G E ++ + +G PLP YI RP++
Sbjct: 112 FGEDDS---MVAEVIDNTTSRGRTLRFLYDGNHDEFKKALYALGETPLPKYI--DRPVEP 166
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D YQ +A +G+V AP AGLHF+ L+ RL + ++TLH G G F + VED
Sbjct: 167 DDEDRYQNIFATEEGAVVAPAAGLHFSRELMKRLEIKDCQFAYLTLHSGLGNFREIDVED 226
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
H M SE ++ +N+ K G +I +VGT+ +R +ETA + DG + + G+TN
Sbjct: 227 LTKHKMDSEQMVVNGDVVNIVNTAKDNGRQICAVGTSVMRAIETAVSTDGHLKEFEGWTN 286
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
FI P Y F +++NFH+P STLLM+ ++F G + Y+ A+ Y F +YGD
Sbjct: 287 KFIFPPYDFSVASSMITNFHMPLSTLLMMTASFGGYDLIMDAYEVALKEKYSFGAYGDAM 346
Query: 355 LLF 357
L+
Sbjct: 347 LIL 349
>gi|145219412|ref|YP_001130121.1| queuosine biosynthesis protein [Prosthecochloris vibrioformis DSM
265]
gi|189038873|sp|A4SDR0|QUEA_PROVI RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|145205576|gb|ABP36619.1| Queuosine biosynthesis protein [Chlorobium phaeovibrioides DSM 265]
Length = 341
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 129/365 (35%), Positives = 194/365 (53%), Gaps = 34/365 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD+ LP RIA P R + RL+V++ + + S+L AFL D +V
Sbjct: 1 MKVSDFDYSLPEERIAKYPPDNRGATRLLVLNRHTGS---VQHARYSNLEAFLGYGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV-----SPNSWSVYARPSKVIKKGDIL 115
N TKV+ A+L V K+ + + + P + ++Y +KKGD L
Sbjct: 58 INTTKVVRARLFAV---------KQTGAAIELMLLEKHEGPQNLALY---RGRLKKGDRL 105
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDA 174
+ +I + G+ + S+ GIE + +P+PPY+ KR +A
Sbjct: 106 LAHGHE--------LIVEELAGQGVARLSVEGIESVHALFQNHAEVPIPPYL--KRDAEA 155
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D YQT +A+ GSVAAPTA L+ T LL +L G+ +TLHVG GTF+P++ E
Sbjct: 156 VDRERYQTVFAEHPGSVAAPTASLNMTPELLLKLEKGGVATAVMTLHVGLGTFLPIRTET 215
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII---NPWSG 291
++H+MH E I A T + ++ + GGR+V++GTT R LE A T +P G
Sbjct: 216 MEEHVMHREFYSIPARTIEQIHETRRSGGRVVALGTTVTRALEHAATRISAFSGSDPLVG 275
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
+IFI PGY F+ +D L++NFH P+ST+LML +AF G + + Y+ A+ Y F SYG
Sbjct: 276 EADIFIHPGYSFQTIDALLTNFHAPRSTVLMLTAAFAGADHLRAAYREAVEKRYDFLSYG 335
Query: 352 DTSLL 356
D+ L+
Sbjct: 336 DSMLI 340
>gi|229496076|ref|ZP_04389798.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas endodontalis ATCC 35406]
gi|229316972|gb|EEN82883.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas endodontalis ATCC 35406]
Length = 349
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 130/360 (36%), Positives = 182/360 (50%), Gaps = 16/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EF FDLP IA PV RD +RLM++H I + D+ + D V
Sbjct: 1 MKLSEFGFDLPQELIASHPVEHRDESRLMILHRKDGS---IEHGIFKDILKYFGKGDTFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN--SWSVYARPSKVIKKGDILHFF 118
FNNTKVI A+L G + + +I L ++P W V P++ I+ G+ L+F
Sbjct: 58 FNNTKVIPARLYGKK----EKTNAKIEVFLLRELNPQIKLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDARD 176
DG L A VID G L F G E + + +G PLP Y+ +R D
Sbjct: 114 PDDG---LMAEVIDNTINGGRTLRFLYDGSHEEFKSYLYALGEAPLPKYM--ERDATEED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+QT YA +G+V AP AGLHF+ LL RL ++ ++TLH G G F +ED
Sbjct: 169 LERFQTIYASEEGAVIAPAAGLHFSRELLKRLEIADCRLAYLTLHNGLGNFENQDIEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H ++E FI + + G IV+VGT+ LR LETA + DG + + G+TN +
Sbjct: 229 KHKKNNEQMFIGPECCEITRKARDEGKHIVAVGTSVLRALETAVSTDGYVKEFDGWTNKY 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y V L++NFH+P+S LLM +A G + Y+ A YRF +YGD L+
Sbjct: 289 IYPPYPIEFVTSLITNFHMPQSLLLMNAAAVAGYQNIMNAYEVAKQEKYRFGAYGDAMLI 348
>gi|88803608|ref|ZP_01119133.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Polaribacter irgensii 23-P]
gi|88780620|gb|EAR11800.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Polaribacter irgensii 23-P]
Length = 349
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 131/363 (36%), Positives = 194/363 (53%), Gaps = 22/363 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F+F+LP +A+ P RD +RLMV++ I D+ + + D ++
Sbjct: 1 MKLSHFEFELPEELLAIYPAEHRDESRLMVLN---KAAGTIEHKQFKDVINYFDEGDVLM 57
Query: 61 FNNTKVITAQLNGVRFCHINRREK-----EISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
N+TKV A++ G +EK E+ + W V P++ I+ G+ L
Sbjct: 58 LNDTKVFPARMFG-------NKEKTGARIEVFLLRELNAENRLWDVLVDPARKIRIGNKL 110
Query: 116 HFFSQDGQSRLEATVIDKWNT-GEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPID 173
FF +D L A VID + G L +F S ++ +G PLP IAR+ ++
Sbjct: 111 -FFGED--DSLVAEVIDNTTSRGRTLRFLFDGSYEAFRAKLLELGQTPLPKAIARE--VE 165
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT YAK +G+VAAP+AGLHF+ +LL RL G+ +TLHVG GTF V+VE
Sbjct: 166 PSDTERYQTIYAKNEGAVAAPSAGLHFSKHLLKRLEIKGVDFAKMTLHVGLGTFSAVEVE 225
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
D H M SE I TA +N K RI +VGTT +R +E++ + +N + G+T
Sbjct: 226 DLSKHKMDSEQIVIPEKTAVMINKAKKEKRRICAVGTTVMRTVESSVSSKQELNAFEGWT 285
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
N F+ P + F + +++NFHLPKSTLLM +AF G + + Y+ AI Y+F +YGD
Sbjct: 286 NKFLFPPHEFSIANAMITNFHLPKSTLLMQAAAFGGYDFIMEAYKVAIKEGYKFSTYGDA 345
Query: 354 SLL 356
L+
Sbjct: 346 MLI 348
>gi|194333528|ref|YP_002015388.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Prosthecochloris aestuarii DSM 271]
gi|194311346|gb|ACF45741.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Prosthecochloris aestuarii DSM 271]
Length = 341
Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 131/359 (36%), Positives = 193/359 (53%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD++LP S IAL P R + RL V+ I+ +DL FL D +V
Sbjct: 1 MNVSDFDYELPESSIALYPPAERGTTRLEVLCRETGS---ITHARYADLHRFLEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L + + +I L + + V R +K+GDIL
Sbjct: 58 LNNTRVILARLFASK-----KTGAKIELVLLEKHERDQNLVMYRGR--LKRGDIL----- 105
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
S E ++D I V +SG ++ +P+PPY+ +R + D Y
Sbjct: 106 --ISHGEELLVDSLVGNGIASVSCLSGRQIASFFQEFAEVPIPPYL--RRDAEEVDRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+I GSVAAPTA L+ T L+ L G+++ +TLHVG GTFMP++V+D H+M
Sbjct: 162 QTVFAEIPGSVAAPTASLNMTPELIDTLRLKGVQIASITLHVGLGTFMPIRVDDLASHVM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT---EDGIINPWSGFTNIFI 297
H E I A+ + R R+++VGTT R LE A+ + P G +IFI
Sbjct: 222 HREYYDIPVSVVSAIRDARDRRKRVIAVGTTVTRALEHASQTVLHTNPVMPVRGEADIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+F+ +D L++N+H P+ST+LML +AF G + +K YQ A+ + YRF SYGD+ L+
Sbjct: 282 YPGYQFQTIDALVTNYHAPRSTVLMLTAAFAGWDLLRKGYQEALQNDYRFLSYGDSMLI 340
>gi|154494349|ref|ZP_02033669.1| hypothetical protein PARMER_03704 [Parabacteroides merdae ATCC
43184]
gi|154085793|gb|EDN84838.1| hypothetical protein PARMER_03704 [Parabacteroides merdae ATCC
43184]
Length = 349
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 126/363 (34%), Positives = 187/363 (51%), Gaps = 20/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP IAL P RD +RLM+V+ I + DL ++ D +
Sbjct: 1 MKLSKFKFNLPQELIALHPAKNRDESRLMIVNRKTG---EIEHKVFKDLLSYFGEKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRRE----KEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
FNNTKV A+L G + R E +E++ L + W V P++ I+ G+ L+
Sbjct: 58 FNNTKVFPARLYGNKEKTGARIEVFLLRELNEDLRL------WDVLVDPARKIRIGNKLY 111
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDA 174
F D + A VID + L F G E ++ + +G PLP YI RP++
Sbjct: 112 FGEDDS---MVAEVIDNTTSRGRTLRFLYDGNHDEFKKALYALGETPLPKYI--DRPVEP 166
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D YQ +A +G+V AP AGLHF+ L+ RL + F+TLH G G F + VED
Sbjct: 167 DDEDRYQNIFATEEGAVVAPAAGLHFSRELMKRLEIKDCQFAFLTLHSGLGNFREIDVED 226
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
H M SE ++ +N+ K G +I +VGT+ +R +ETA + DG + + G+TN
Sbjct: 227 LTKHKMDSEQMVVNGDVVNIVNTAKDNGRQICAVGTSVMRAIETAVSTDGHLKEFEGWTN 286
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
FI P Y F +++NFH+P STLLM+ ++F G + Y A+ Y F +YGD
Sbjct: 287 KFIFPPYDFSVASSMITNFHMPLSTLLMMTASFGGYDLIMDAYDVALKEKYSFGAYGDAM 346
Query: 355 LLF 357
L+
Sbjct: 347 LIL 349
>gi|254432744|ref|ZP_05046447.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cyanobium
sp. PCC 7001]
gi|197627197|gb|EDY39756.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cyanobium
sp. PCC 7001]
Length = 392
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 140/358 (39%), Positives = 193/358 (53%), Gaps = 13/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +DF LP RIA RPV PR +ARL+VV P C V DL L D +V
Sbjct: 20 LKLSSYDFPLPQERIAQRPVEPRHAARLLVVDPEPDC----RHRQVWDLQQELRPGDLLV 75
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L R + + W ARP K + GD L ++
Sbjct: 76 VNDTRVLRARLQARRPSGGAVELLVLEPWTGPGAAAGQWLCLARPGKRLHPGDGLEVVAE 135
Query: 121 DGQSRLEATVIDK-WNTGEILLVFSIS---GIELERQISLVGTIPLPPYIARKRPIDARD 176
GQ L TV+ + +TG ++ F LE + G IPLPPYI P D+
Sbjct: 136 -GQPPLTVTVVARDGDTGGRVIQFPPDCDHAATLEPLLVRYGAIPLPPYIHEHHPSDSDR 194
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
Y QT YA G+VAAPTAGLH + LL+ + G+++ TLHVG GTF PV+ ED
Sbjct: 195 Y---QTRYASRPGAVAAPTAGLHLSDELLAAIRRRGVEIATTTLHVGLGTFRPVETEDLR 251
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE-TATTEDGIINPWSGFTNI 295
+HSE + A+ + ++RGGR++++GTTS+R LE A G + P +G N+
Sbjct: 252 GLELHSEWVEVSHELVAAVQACRARGGRVIAIGTTSVRSLEGVAALHGGELKPHTGPVNL 311
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
I PG+RF V L++NFHLPKS+LL+LVSA G + +Y AI+ YRF+SYGD
Sbjct: 312 VIQPGFRFAVVQGLLTNFHLPKSSLLLLVSALLGRQRLLALYAEAIAREYRFFSYGDA 369
>gi|302338528|ref|YP_003803734.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Spirochaeta smaragdinae DSM 11293]
gi|301635713|gb|ADK81140.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Spirochaeta smaragdinae DSM 11293]
Length = 346
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 146/361 (40%), Positives = 190/361 (52%), Gaps = 29/361 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHL-VSDLPAFLNSNDAI 59
M +F FDLP IA P R ++R++VV HL SD P + + +
Sbjct: 1 MKTSDFSFDLPEELIAQTPSEKRGASRMLVVDRKSGT----FRHLHTSDFPEIVEDDVLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLH-MRVSPNS-----WSVYARPSKVIKKGD 113
V N++KV A+L G E + + + P+S W+ +K + G
Sbjct: 57 VVNDSKVRKARLFG---------SSETGGKVEFLLLHPDSQDHCLWTAMVSKAKKQRPGK 107
Query: 114 ILHFFSQDGQSRLEATVIDKWNTGEILLV-FSISGIELERQISLVGTIPLPPYIARKRPI 172
F Q + +EA I+ +TG V FSI + +++ G IPLPPYI +R
Sbjct: 108 RF-LFPQGIEGIIEA--INGDSTGPYRRVRFSIPVDDAYLEVN--GHIPLPPYI--RRED 160
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D YQT YA+ GSVAAPTAGLHFT + L I V +TLHVG GTF+PV+
Sbjct: 161 TELDEERYQTVYARHPGSVAAPTAGLHFTEETFTALKKRSIPVARLTLHVGLGTFLPVRS 220
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWSG 291
E+ DH MH E I A +N K G +IV+VGTTS+R LE+A TE+G I S
Sbjct: 221 EEITDHEMHRERYEISQDVADTINRAKYDGRKIVAVGTTSVRTLESAWDTEEGCIRTGSA 280
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T +FI PGY F+ VD L +NFH PKSTLLMLVSAF G E Y A+ YRF+SYG
Sbjct: 281 ETRLFIYPGYTFKVVDRLFTNFHTPKSTLLMLVSAFAGKELIDAAYAEALKERYRFFSYG 340
Query: 352 D 352
D
Sbjct: 341 D 341
>gi|299768785|ref|YP_003730811.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter sp. DR1]
gi|298698873|gb|ADI89438.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter sp. DR1]
Length = 345
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 133/359 (37%), Positives = 189/359 (52%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP IA P+ R ++RL+ +L DH+ +D+ D +V
Sbjct: 1 MQLSDFSFELPDELIARYPLESRSASRLL----HLDSKGKYHDHMFTDIIDLFEEGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G R I + ++ + + + S K G L+
Sbjct: 57 LNDTKVMKARLKGKR-----STGGAIEILVERMLNHTTAYCHIKSSNSPKAGAELYV--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G + V + E L V S L + G +P+PPY R+ + D Y
Sbjct: 109 -GADNIPVIVRGRH---ENLFVVEFSQAILP-VLEQYGQLPIPPYFNRE--AEEIDTERY 161
Query: 181 QTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
QT + + SVAAPTA LHF LL +L ++ FVTLHVGAGTFMPV+ +D +H
Sbjct: 162 QTVFHNPEKIASVAAPTASLHFDETLLEKLEQKNVQKTFVTLHVGAGTFMPVRTDDITNH 221
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFI 297
IMHSE + T + + K+RG ++++VGTT+ R LE+A G I W+G T IFI
Sbjct: 222 IMHSEWCDVPQETIDLILATKARGNKVIAVGTTATRALESAAQAHGGKIAAWTGDTQIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY F VD L++NFHLP+STLLMLVSA + Y+HA+ YRF+SYGD L+
Sbjct: 282 YPGYEFCIVDRLITNFHLPESTLLMLVSALSNRDNILAAYEHAVKSRYRFFSYGDAMLV 340
>gi|257063451|ref|YP_003143123.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Slackia
heliotrinireducens DSM 20476]
gi|256791104|gb|ACV21774.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Slackia
heliotrinireducens DSM 20476]
Length = 361
Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 135/374 (36%), Positives = 192/374 (51%), Gaps = 32/374 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD++LPP RIA P RD RL+V+ ++D + D+ +L D +V
Sbjct: 1 MRTDDFDYELPPERIAQEPWPVRDECRLLVMDRKTG---EVTDRIFRDVAEYLQPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHM-----RVSPNS-----WSVYARPSKVIK 110
N T+V+ A+L G ++R +C + + V P + W V RP + +K
Sbjct: 58 ANETRVLPARLLG------SKRGTGGACEVFLLRERFDVEPKTTHTAVWDVLVRPGRRLK 111
Query: 111 KGD--ILHFFSQDGQSRLEATVIDKWNT----GEILLVFSISGIELERQISLVGTIPLPP 164
G ++ F DG L A +ID W + GE + S + + G PLPP
Sbjct: 112 PGTGAMVDFEGPDGNVVLSAEIID-WGSDTGKGERIARLSTPLDSFDEALHAAGHTPLPP 170
Query: 165 YIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
YI A D YQT Y++ + S AAPTAGLHFT L+ L + G++ + V L VG
Sbjct: 171 YIKGY----AGDEEMYQTVYSQAETSAAAPTAGLHFTPELIGSLKAKGVEWHTVELQVGL 226
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTED 283
TF V +D H MH+E + A ++ +RG R+ +VGTTS+R LE+A E
Sbjct: 227 DTFRVVDEDDPAQHAMHTEFYSVPQSVVDACDAAHARGNRVFAVGTTSVRSLESAFDRES 286
Query: 284 GIINPWS-GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAIS 342
G + T +FI PGY F VD L++NFH+P+STL+MLVSAF E Y+HAI
Sbjct: 287 GKLRARDHEATCLFILPGYTFGVVDGLITNFHVPRSTLMMLVSAFSTRENIMAAYKHAID 346
Query: 343 HAYRFYSYGDTSLL 356
YR S+GD L+
Sbjct: 347 SEYRMLSFGDAMLI 360
>gi|219684851|ref|ZP_03539793.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
garinii PBr]
gi|219671796|gb|EED28851.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
garinii PBr]
Length = 346
Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 136/368 (36%), Positives = 200/368 (54%), Gaps = 38/368 (10%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF F+LP S IA P R S+RLMV+ P L + ++ V+++ ++NS+ I+
Sbjct: 1 MKTKEFHFNLPYSLIAQYPSEKRGSSRLMVLDPKLQK--IYHENSVNNILKYINSDTFII 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHM----RVSPNSWSVYARPSKVIKKGDILH 116
FNN+KV +++ E E+ + R+ + ++ SK G++
Sbjct: 59 FNNSKVRKSRMYA---------ESEMGNNIEFLILDRIGTDLFTALISKSKKQIVGNVYK 109
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
F L ++ K N EI+L F + ++ E G +P+PPYI KR D D
Sbjct: 110 F-----PEGLMGEILSK-NNSEIVLKFD-NNVD-EDYFEKHGFVPIPPYI--KRDYDKID 159
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT Y+K GS A+ TAGLHF+ +L S I+ F+TLHVG GTF+PV+ + +
Sbjct: 160 EDRYQTVYSKYVGSAASATAGLHFSRDLFSAFEKNNIEYDFITLHVGLGTFLPVRSKKVE 219
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF---- 292
+H MH E I+ A L + K G +I+S+GTT+LR LE++ N F
Sbjct: 220 EHNMHFETFLIENSVAARLENAKFLGKKILSIGTTTLRALESSYD-----NKLKKFKTGQ 274
Query: 293 --TNIFITPG--YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
TN+FI PG Y F+ VD+L +NFH P+STLLMLVS+F G + Y+ AI+ Y+F+
Sbjct: 275 QSTNLFIYPGKNYCFKFVDMLFTNFHTPQSTLLMLVSSFAGKDFVFSSYEEAINKGYKFF 334
Query: 349 SYGDTSLL 356
SYGD L+
Sbjct: 335 SYGDAMLV 342
>gi|189499978|ref|YP_001959448.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Chlorobium
phaeobacteroides BS1]
gi|189495419|gb|ACE03967.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Chlorobium
phaeobacteroides BS1]
Length = 346
Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 125/359 (34%), Positives = 194/359 (54%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F F+LP +RIA RP R+ +LMV++ I SD+ ++ D +V
Sbjct: 1 MRLSNFRFNLPKTRIADRPEENREDCKLMVLNRRKKD---IDHKAFSDIVSYFKKGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
NN++V A++ F + + +I L ++ + W V P++ ++ G+ ++F
Sbjct: 58 LNNSRVFPAKI----FGQKEKTDAKIEVFLLRELNKEAGLWDVLVDPARKVRVGNKIYF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
Q + A V+D + + F I++ + +GT+PLPPY +RK P DA D
Sbjct: 113 ----QDDVVAEVVDNTTSRGRTIRFLNPEIDVFDLVEKIGTVPLPPYFSRK-PDDA-DRQ 166
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT YA G+V AP AGLHFT +L + G+K+ +TLH +F ++VED H
Sbjct: 167 DYQTVYASQTGAVVAPMAGLHFTMPILEEIKKKGVKILQITLHPSLSSFNAIEVEDVSKH 226
Query: 239 IMHSEIGFIDAPTAQALNSVK-SRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
M SE I TA +N K ++ GR+++VGTT+ R+LE T +G I G+T+ FI
Sbjct: 227 KMDSEYFNIPYQTAMEINETKLNKSGRVIAVGTTTCRVLEANATVEGKIKFGQGWTDKFI 286
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
P Y+F+ D L++NF P++TLLM+VSAF Y+ A+ YRF +YGD +
Sbjct: 287 YPPYQFKVTDGLIANFQQPETTLLMMVSAFAEYRLLMDAYKIALKKDYRFLAYGDAMFI 345
>gi|94987231|ref|YP_595164.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase (queuine
synthetase) [Lawsonia intracellularis PHE/MN1-00]
gi|94731480|emb|CAJ54843.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Lawsonia intracellularis PHE/MN1-00]
Length = 366
Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 135/375 (36%), Positives = 201/375 (53%), Gaps = 37/375 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
++ + F LP ++IA P + R +RL+V+ S ++ +D S + +L +N ++
Sbjct: 9 FLLSSYMFSLPKTQIAQYP-YERGKSRLLVLTKKNST-IIHTD--FSKIEHYLPNNSLLI 64
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISC-------TLHMRVSPNSWSVYA--------RP 105
NN++V A++ FC ++R E+ + + S + ++ RP
Sbjct: 65 ANNSRVFPARI----FCSYDKRNIEVFLLTPISFLEIQAKSSDEHYGAWSTAIGECLIRP 120
Query: 106 SKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPY 165
+K + G L+ Q LE V+ K + G ++ G L G IP PPY
Sbjct: 121 AKRVNIGSKLYL-----QQELEIEVLKKEDFGRHIVKLCWKG-SLSNIFFSYGDIPHPPY 174
Query: 166 IARKRPIDARDYVDYQTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVG 223
I + + ++ YQT Y+++ GSVAAPTAGLHF+ + ++L GI +TLHVG
Sbjct: 175 IHQSNKVQDKE--RYQTVYSRLDKLGSVAAPTAGLHFSETIRNKLQKNGISWAEITLHVG 232
Query: 224 AGTFMPVKVEDTDDHIMHSEIGFIDAP--TAQALNSVKSRGGRIVSVGTTSLRLLETATT 281
GTF PV+ D HIMHSE F++ P T QA+ + G I ++GTT +R LE +T
Sbjct: 233 YGTFSPVRCNDIRKHIMHSE--FVEVPETTVQAIKKARFEGRPIFAIGTTVVRALEGVST 290
Query: 282 EDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAI 341
G + P++GF NIFI+PGY+F VD L++NFHLP STLLMLVSAF Y AI
Sbjct: 291 ICGSLQPYTGFINIFISPGYKFSYVDGLVTNFHLPGSTLLMLVSAFTKRSIMINTYNKAI 350
Query: 342 SHAYRFYSYGDTSLL 356
YRF+SYGD L+
Sbjct: 351 ELGYRFFSYGDAMLI 365
>gi|325123435|gb|ADY82958.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queuosine
biosynthesis protein ) [Acinetobacter calcoaceticus
PHEA-2]
Length = 345
Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 135/366 (36%), Positives = 192/366 (52%), Gaps = 36/366 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP IA P+ R ++RL+ +L DH+ +D+ D +V
Sbjct: 1 MQLSDFSFELPDELIARYPLESRSASRLL----HLDSKGQYHDHMFTDIIDLFEEGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCH------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
N+TKV+ A+L G R + R + H++ S NS K D
Sbjct: 57 LNDTKVMKARLKGKRSTGGAIEILVERMLNHTTAYCHIK-SSNS-----------PKADA 104
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLV-FSISGIELERQISLVGTIPLPPYIARKRPID 173
F D VI + + +V FS + + Q G +P+PPY R+ +
Sbjct: 105 ELFVGADN-----IPVIVRGRHENLFVVEFSQPILPVLEQ---YGQLPIPPYFNRE--AE 154
Query: 174 ARDYVDYQTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK 231
D YQT + + SVAAPTA LHF LL++L ++ FVTLHVGAGTFMPV+
Sbjct: 155 EIDTERYQTVFHNPEKIASVAAPTASLHFDEELLAKLEQKNVQKSFVTLHVGAGTFMPVR 214
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWS 290
+D +H+MHSE + T + + K+RG ++++VGTT+ R LE+A G I W+
Sbjct: 215 TDDITNHVMHSEWCDVPQETIDLILATKARGNKVIAVGTTATRALESAAQAHGGKIAAWT 274
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G T IFI PGY F VD L++NFHLP+STLLMLVSA + Y+HA+ YRF+SY
Sbjct: 275 GDTQIFIYPGYEFCIVDRLITNFHLPESTLLMLVSALSNRDNILAAYEHAVKSRYRFFSY 334
Query: 351 GDTSLL 356
GD L+
Sbjct: 335 GDAMLI 340
>gi|124025170|ref|YP_001014286.1| queuosine biosynthesis protein [Prochlorococcus marinus str.
NATL1A]
gi|166216736|sp|A2C0L1|QUEA_PROM1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|123960238|gb|ABM75021.1| Queuosine biosynthesis protein [Prochlorococcus marinus str.
NATL1A]
Length = 365
Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 137/360 (38%), Positives = 202/360 (56%), Gaps = 13/360 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +++DLP IA P R A+LM++ L L + V D+ L D +V
Sbjct: 8 LLSSYNYDLPKDLIAQSPTRSRHDAKLMIIKDGLDDSLNLVHAKVWDIKDILKPADLLVV 67
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNT+V+ A+L +R E I + R W RP++ ++ GD L +
Sbjct: 68 NNTRVVKARLK-IRLSGGGAGELLI---MEPR-GDGRWLCLGRPARRMRGGDQL-WLDTS 121
Query: 122 GQSRLEATVIDK-WNTGEILLVFS---ISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+ L VIDK TG ++ FS S E+E + L G +PLPPYI + R +
Sbjct: 122 RDNSLILKVIDKDEKTGGRIIQFSNEFTSWTEMENLLDLCGEVPLPPYIDKDRSSGHEE- 180
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
+YQT +A G++AAPTAGLH + L+ L GI++ +TLHVG GTF P++ ED
Sbjct: 181 -NYQTRFASKPGAIAAPTAGLHLSDELIENLKIRGIRIAQITLHVGLGTFRPLEKEDLSQ 239
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWSGFTNIF 296
+HSE + T +A+ + K GG++ +VGTTS+R LE A + G + P+ G N+
Sbjct: 240 LHLHSEWIEVTEETIKAITTCKEEGGKVFAVGTTSVRALEAAYLSGRGALKPYEGKVNLV 299
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PG++F +D L++NFHLPKS+LL+LVSA G K+Y+HAIS+ YRF+SYGD L+
Sbjct: 300 IKPGFKFSVIDGLLTNFHLPKSSLLLLVSALIGRNRMLKLYKHAISNKYRFFSYGDAMLI 359
>gi|301166843|emb|CBW26420.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteriovorax marinus SJ]
Length = 348
Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 136/366 (37%), Positives = 201/366 (54%), Gaps = 29/366 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +DFDLP +A RP+ R +++L+V + +I +H +L +L + +V
Sbjct: 6 LTLSNYDFDLPKELVASRPIAGRHNSKLLVY--KVKSGEIIHEHFY-NLANYLPEDSLLV 62
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVS-PNSWSVYARPSKVIKK---GDILH 116
N +KV +L I ++ C + + S PNS Y K K GD
Sbjct: 63 LNQSKVFPCRL-------IGKKPTGGKCEVFLLESYPNSNGEYKSLIKTSSKKSVGDEF- 114
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
FF + +++E ID+ N S + L ++ IP+PPYI R D D
Sbjct: 115 FFEDELVAKIER--IDEGN-----FYISFNRENLAEYLNEYAKIPIPPYI-RNGESDELD 166
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT +AK GSVAAPTAGLHFT ++ L I+ +VTLHVG GTF PVK ++
Sbjct: 167 KSDYQTVFAKNIGSVAAPTAGLHFTEDVFKSLQEKNIERAYVTLHVGLGTFAPVKTDNLQ 226
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF--TN 294
DH MHSE FID + + S K I +VGTTSLR+LE++ + + T+
Sbjct: 227 DHKMHSENYFIDTENKEKILSKK----EIFAVGTTSLRVLESSHNGENFDIEANEIKETD 282
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IF+ PG +++ L++NFHLPKSTLLMLVS+ G E+T ++Y+ AI++ YRF+SYGD+
Sbjct: 283 IFLHPGVDVHSINGLITNFHLPKSTLLMLVSSLIGREKTLELYKEAIANEYRFFSYGDSM 342
Query: 355 LLFQKR 360
L+ + +
Sbjct: 343 LILRDQ 348
>gi|303325841|ref|ZP_07356284.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Desulfovibrio sp. 3_1_syn3]
gi|302863757|gb|EFL86688.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Desulfovibrio sp. 3_1_syn3]
Length = 376
Score = 206 bits (524), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 137/371 (36%), Positives = 193/371 (52%), Gaps = 28/371 (7%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDH-LVSDLPAFLNSNDAIVFNN 63
+ FDLPP +IA P R ++RL+V+ S P H + DLP L N I+ NN
Sbjct: 13 YRFDLPPEQIAQFPPEERGASRLLVLPRKGASDPRPELRHGMFGDLPDCLPENALIIANN 72
Query: 64 TKVITAQLNGVR----------------FCHINRREKEISCTLHMRVSPNSWSVYARPSK 107
++V+ A+L G R R +K + R
Sbjct: 73 SRVLQARLLGSRGTGGKVEFLLLTPLPLVMERARPDKRLGGAGGAEAFSAEAEGLVRCGG 132
Query: 108 VIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIA 167
+++G+ F + + TV++ G+ + + G +L + + G IPLPPYI
Sbjct: 133 SVREGETFAF-----GAGISVTVLESGPFGQRRVRLAWQG-DLAKAFAATGHIPLPPYI- 185
Query: 168 RKRPIDARDYVDYQTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAG 225
KR D YQT YA+ GSVAAPTAGLHFT + +L G + VTL+VG G
Sbjct: 186 -KRADGEEDLSRYQTVYARSDKTGSVAAPTAGLHFTPAMREKLADRGFEWAEVTLYVGYG 244
Query: 226 TFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI 285
TF PV+ ED H MH E + TA A+ K++G +V+VGTTS+R LE G
Sbjct: 245 TFSPVRCEDIRSHRMHREYVEVPEATAAAIARAKAQGRPVVAVGTTSVRTLEGVAELCGR 304
Query: 286 INPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAY 345
+ P++G+T+IF+ PG FR VD +++NFHLP+S+LLMLVSAF G E Y A++ Y
Sbjct: 305 VQPYTGWTDIFLYPGRSFRVVDAVLTNFHLPESSLLMLVSAFAGRERMLAAYAEAVTRGY 364
Query: 346 RFYSYGDTSLL 356
RF+SYGD L+
Sbjct: 365 RFFSYGDAMLI 375
>gi|188994845|ref|YP_001929097.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas gingivalis ATCC 33277]
gi|188594525|dbj|BAG33500.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas gingivalis ATCC 33277]
Length = 405
Score = 206 bits (524), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 147/408 (36%), Positives = 194/408 (47%), Gaps = 65/408 (15%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+ LP RIA + RD+ +L+V I D + S L L S +V N
Sbjct: 9 IADYDYPLPEERIAKHALPQRDACKLLVYDKG-----EIKDAVFSRLSEVLPSGSMLVRN 63
Query: 63 NTKVITAQL-----NGVR---FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NT+VI A+L G FC + +L R S W +K + GD+
Sbjct: 64 NTRVIRARLLFHKSTGATIEVFCLEPVSPAQYELSLTARGS-CVWHCMVGNAKRWRSGDL 122
Query: 115 -LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
+ S G S L D G I + + + G +P+PPY+ R +
Sbjct: 123 QMEIPSPQGGSILLTASHDPAADGCIRFSWENDHYTFGEILEMAGILPIPPYL--NRDTE 180
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT YAK QGSVAAPTAGLHFT RL + G V VTLHVGAGTF PVK E
Sbjct: 181 EEDLETYQTVYAKNQGSVAAPTAGLHFTEEEFERLRAQGTPVIDVTLHVGAGTFRPVKSE 240
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-------------AT 280
+H MH E+ I+ + +AL + GRIV+VGTTS+R LE+ +
Sbjct: 241 TIGEHRMHRELIVIERSSLEALRDWQ---GRIVAVGTTSVRTLESLYWLGRSLSTASHTS 297
Query: 281 TEDGIINPWSGFTN-------------------------------IFITPGYRFRAVDIL 309
E +N W + N I I PGYR+R VD +
Sbjct: 298 QESLKVNQWEAYENEDAALSRSEAIRIILAWMDEQGVETLIFPTKILIAPGYRYRMVDAM 357
Query: 310 MSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
++NFH P+STLL+LVSAF G E+ K +Y HA+ YRF SYGD SLL
Sbjct: 358 ITNFHQPRSTLLLLVSAFIG-EDWKAVYHHALESGYRFLSYGDGSLLI 404
>gi|194335961|ref|YP_002017755.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Pelodictyon
phaeoclathratiforme BU-1]
gi|238693403|sp|B4SEZ1|QUEA_PELPB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|194308438|gb|ACF43138.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Pelodictyon
phaeoclathratiforme BU-1]
Length = 341
Score = 206 bits (524), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 134/360 (37%), Positives = 194/360 (53%), Gaps = 30/360 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD++L +IA P R S RL+V++ + S +V + + DL FL D +V
Sbjct: 1 MRTGDFDYELSEEKIAKYPPAERGSTRLLVLNRH-SGAVVHASYASLDL--FLQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L + I L + V R +KKGD L Q
Sbjct: 58 LNNTRVLRARLYASKSTGAR-----IELMLLEKHQEEQNRVLYRGK--LKKGDKLMAHDQ 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLV----GTIPLPPYIARKRPIDARD 176
E V D + G + ++ G ER +S + G +P+PPY+ KR + D
Sbjct: 111 ------ELLVTDIVDHG--IARIAVCG---ERSLSDLFERFGGVPIPPYL--KRDAEEVD 157
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT +A++ GSVAAPTA L+ TS LL L G+ + +TLHVG GTF+PV+ + +
Sbjct: 158 RERYQTVFAELPGSVAAPTASLNMTSELLDTLRRKGVDMVTLTLHVGLGTFLPVRADALE 217
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN---PWSGFT 293
+H+MH E I A + + VK+ GGR+++VGTT R LE A P +G
Sbjct: 218 EHVMHREYYSIPATLVEKIRKVKTTGGRVIAVGTTVTRALEHAGERMETFTGDAPLTGEA 277
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PGY+FR +D L++NFH P+ST+LML +AF G + + YQ A+ YRF SYGD+
Sbjct: 278 DIFIYPGYQFRIIDCLLTNFHAPRSTVLMLTAAFAGPDHLRNAYQKALEEGYRFLSYGDS 337
>gi|294101858|ref|YP_003553716.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Aminobacterium colombiense DSM 12261]
gi|293616838|gb|ADE56992.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Aminobacterium colombiense DSM 12261]
Length = 349
Score = 206 bits (524), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 131/356 (36%), Positives = 191/356 (53%), Gaps = 17/356 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ + +DLP RIA P PR+ +RL+V+ N S ++ S +L FL D IV N
Sbjct: 8 IESYAYDLPEGRIAQTPASPRNHSRLLVLDKN-SGTMIHSRFY--ELHRFLKEGDVIVLN 64
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+VI A+L GV+ R EI + W RP + ++ G I+ +D
Sbjct: 65 DTRVIPARLFGVKEKGSAR--AEILLLKPLDGLWKRWEALVRPGRRLRPGSIV-IVREDI 121
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+++ + D + +V + + VG IP PPYI +DYQT
Sbjct: 122 PVQVQEALADG-----VRVVRFPEECNVLSLLEEVGEIPFPPYIKST----TATALDYQT 172
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISI-GIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
+AK GS AAPTA LHFT N L L GI +VTLHVG GTF PV+ ED H++H
Sbjct: 173 VFAKRNGSSAAPTASLHFTENQLRDLEDKHGITFAWVTLHVGLGTFRPVQEEDIRQHVIH 232
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITPG 300
E + TA + K G RI++ GTT R LE+ AT ++ ++ T++FI P
Sbjct: 233 EEYCEVPEETAALIRKAKEEGRRIIASGTTVARTLESMATHDENVVQYGRKNTSLFIYPA 292
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F +D L++NFHLP+STLLMLV+A G + ++Y+ A+ YRF+S+GD L+
Sbjct: 293 YQFSVIDGLITNFHLPRSTLLMLVAALAGYDNIMEVYETAVKMGYRFFSFGDAMLI 348
>gi|325282154|ref|YP_004254696.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Odoribacter
splanchnicus DSM 20712]
gi|324313963|gb|ADY34516.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Odoribacter
splanchnicus DSM 20712]
Length = 408
Score = 206 bits (524), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 143/408 (35%), Positives = 210/408 (51%), Gaps = 63/408 (15%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++++ ++LP RIA P+ R++++L++ I + S++ L + +VFN
Sbjct: 13 IEDYTYNLPDERIAKFPLAEREASKLLIYRGER-----IEESRFSEVRHLLRAGQMLVFN 67
Query: 63 NTKVITAQLNGVR--------FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NTKVI A+L + FC + + R S WS K K+G I
Sbjct: 68 NTKVIHARLFFRKATGAVIEVFCLEPYLPVDYAQNFAARDSCE-WSCMVGNLKKWKEGSI 126
Query: 115 -LHFFSQDGQSRLEATVIDKWNTGEILLVFSISG-IELERQISLVGTIPLPPYIARKRPI 172
F + RL A + + GE+++ FS +G + + G IP+PPY+ R+
Sbjct: 127 ACDFTYGEATYRLTAEKVRQ-QEGELIIRFSWTGGLSFSEVLEGCGRIPIPPYLNRES-- 183
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+A D V YQT Y+K +GSVAAPTAGLHFT +L+ L G+ V +TLHVGAGTF PVK
Sbjct: 184 EASDEVRYQTVYSKEEGSVAAPTAGLHFTRAILNDLKEKGVHVRELTLHVGAGTFRPVKA 243
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET---------ATTED 283
E DH MH+E I + + + +K + G IV+VGTTS+R LE+ A ED
Sbjct: 244 ETIGDHDMHTEHLVI---SRELVEQLKEKTGDIVAVGTTSVRTLESLYWMGVKRLAGQED 300
Query: 284 GI-INPWSGF------------------------------TNIFITPGYRFRAVDILMSN 312
+ W + T I I PGYR+R +D + +N
Sbjct: 301 FFTLGQWEAYTLPQDYSLREAMEALCGWFDTACQELLKARTTIIIVPGYRYRVIDAMFTN 360
Query: 313 FHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
FH P+STLL+LV A G E+ K+Y +A++H +RF SYGD+SLL K+
Sbjct: 361 FHQPQSTLLLLVGAAVG-EDWHKIYDYALTHDFRFLSYGDSSLLEVKK 407
>gi|262377446|ref|ZP_06070669.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter lwoffii SH145]
gi|262307676|gb|EEY88816.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter lwoffii SH145]
Length = 344
Score = 206 bits (523), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 136/375 (36%), Positives = 206/375 (54%), Gaps = 46/375 (12%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F+FDLP IA P+ R ++RL+ +L DH +D+ L D ++
Sbjct: 1 MQLSDFNFDLPDELIARYPLETRSASRLL----HLDTQGQYHDHQFTDILDLLEDGDLLI 56
Query: 61 FNNTKVITAQLNGVRFCH------INRREKEISCTLHMRVS--PNSWS-VYARPS--KVI 109
N+TKV+ A+L G R + R + H++ S P + + ++ P KVI
Sbjct: 57 LNDTKVMKARLKGKRASGGAVEVLVERMQDRFIAYCHIKASNTPKAGAELFIGPDAVKVI 116
Query: 110 KKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARK 169
+G + F ++ FS +++ Q G +P+PPY R+
Sbjct: 117 VQGRHENLF---------------------IVKFSQPILDVLDQ---YGALPIPPYFNRE 152
Query: 170 RPIDARDYVDYQTTY---AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGT 226
+ D YQT + K+ SVAAPTA LHF ++LL++L + GI+ FVTLHVGAGT
Sbjct: 153 --AEEIDTERYQTVFNDPTKL-ASVAAPTASLHFDADLLAKLEAKGIQKTFVTLHVGAGT 209
Query: 227 FMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGI 285
F+PV+ +D +HIMHSE + + + K+RG +++SVGTT+ R +E+A +G
Sbjct: 210 FLPVRTDDIQNHIMHSEWCDVPETAVEMIRQTKARGNKVISVGTTATRAVESAAQAHNGE 269
Query: 286 INPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAY 345
+ W+G T IFI PGY+F+ VD L++NFHLP+STLLMLVSA + Y+HA+ Y
Sbjct: 270 LAAWTGDTQIFIYPGYQFKVVDRLITNFHLPESTLLMLVSALSNRDNILNAYKHAVDSKY 329
Query: 346 RFYSYGDTSLLFQKR 360
RF+SYGD L+ Q +
Sbjct: 330 RFFSYGDAMLIDQAK 344
>gi|193212984|ref|YP_001998937.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Chlorobaculum parvum NCIB 8327]
gi|193086461|gb|ACF11737.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Chlorobaculum parvum NCIB 8327]
Length = 346
Score = 206 bits (523), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 122/359 (33%), Positives = 194/359 (54%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F + LP +RIA P PRD+ +LMV++ I + +D+ ++ D +V
Sbjct: 1 MRLSNFRYTLPKTRIADHPESPRDACKLMVLNRRKKD---IEHKVFTDIVSYFKKGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
NN++V A++ F + + +I L ++ + W V P++ ++ G+ ++F
Sbjct: 58 VNNSRVFPAKI----FGQKEKTDAKIEVFLLRELNKEAGLWDVLVDPARKVRVGNKIYF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ + A V+D + + F I++ + + +G +PLPPY RK P D+ D
Sbjct: 113 ----EDDVVAEVVDNTTSRGRTIRFLNPDIDVFKMVEKIGQVPLPPYFTRK-PKDS-DRT 166
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT YA G+V AP GLHFT LL ++ +G+K+ +TLH TF ++VED H
Sbjct: 167 DYQTVYASQTGAVVAPMGGLHFTMPLLEQIQKVGVKILPITLHPSLSTFNAIEVEDVSKH 226
Query: 239 IMHSEIGFIDAPTAQALNSVK-SRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
M SE I TA +N K ++ GR+ VGTT+ R LE T +G I G+T+ FI
Sbjct: 227 KMDSEYFNIPYQTAMEINETKVNKSGRVFVVGTTTCRALEANATVEGKIKFGQGWTDKFI 286
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
P Y F+ D L++NF P++TL+M+VSAF Y+ A+ + YRF +YGD+ L+
Sbjct: 287 YPPYNFKVTDALITNFQQPETTLMMVVSAFAEHRLLMDAYKTALKNNYRFLAYGDSMLI 345
>gi|72383576|ref|YP_292931.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prochlorococcus marinus str. NATL2A]
gi|91207392|sp|Q46H06|QUEA_PROMT RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|72003426|gb|AAZ59228.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase
[Prochlorococcus marinus str. NATL2A]
Length = 365
Score = 206 bits (523), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 136/360 (37%), Positives = 201/360 (55%), Gaps = 13/360 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +++DLP IA P R A+LM+V L L + V D+ L D +V
Sbjct: 8 LLSSYNYDLPNELIAQSPTKSRHDAKLMIVKDGLDDSLNLVHAKVWDIKDILKPADLLVV 67
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNT+V+ A+L +R E L W RP++ ++ GD L +
Sbjct: 68 NNTRVVKARLK-IRLSGGGAGE----LLLMEPRGDGRWLCLGRPARRMRGGDQL-WLDMS 121
Query: 122 GQSRLEATVIDK-WNTGEILLVFS---ISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+ L VIDK TG ++ FS S E+E + L G +PLPPYI + + D +
Sbjct: 122 RDNSLILKVIDKDERTGGRIIQFSNEFTSWTEMENILDLCGEVPLPPYIDKDKSSDHEE- 180
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT +A G++AAPTAGLH + L+ L + GIK+ +TLHVG GTF P++ ED
Sbjct: 181 -SYQTRFASKPGAIAAPTAGLHLSDELIENLKTRGIKIAQITLHVGLGTFRPLEKEDLSQ 239
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWSGFTNIF 296
+HSE + T +A+ + K GG++ +VGTTS+R LE A + G + P+ G ++
Sbjct: 240 LHLHSEWIEVTEETIKAITNCKEDGGKVFAVGTTSVRALEAAYLSGRGALKPYEGKVDLV 299
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PG++F +D L++NFHLPKS+LL+LVSA G + K+Y+ AIS+ YRF+SYGD L+
Sbjct: 300 IKPGFKFSVIDGLLTNFHLPKSSLLLLVSALIGRKRMLKLYKQAISNKYRFFSYGDAMLI 359
>gi|51598284|ref|YP_072472.1| S-adenosylmethionine: tRNA ribosyltransferase-isomerase [Borrelia
garinii PBi]
gi|81610282|sp|Q662Z1|QUEA_BORGA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|51572855|gb|AAU06880.1| S-adenosylmethionine: tRNA ribosyltransferase-isomerase [Borrelia
garinii PBi]
Length = 346
Score = 206 bits (523), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 136/368 (36%), Positives = 200/368 (54%), Gaps = 38/368 (10%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF F+LP S IA P R S+RLMV+ P L + ++ V+++ ++NS+ I+
Sbjct: 1 MKTKEFHFNLPYSLIAQYPSEKRGSSRLMVLDPKLQK--IYHENSVNNILKYINSDTFII 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHM----RVSPNSWSVYARPSKVIKKGDILH 116
FNN+KV +++ E E+ + R+ + ++ SK G++
Sbjct: 59 FNNSKVRKSRMYA---------ESELGNNIEFLILDRIGTDLFTALISKSKKQIVGNVYK 109
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
F L ++ K N EI+L F + ++ E G +P+PPYI KR D D
Sbjct: 110 F-----PEGLMGEILSK-NNSEIVLKFD-NNVD-EDYFEKHGFVPIPPYI--KRDYDKID 159
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT Y+K GS A+ TAGLHF+ +L S I+ F+TLHVG GTF+PV+ + +
Sbjct: 160 EDRYQTVYSKYVGSAASATAGLHFSRDLFSTFEKNNIEYDFITLHVGLGTFLPVRSKKVE 219
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF---- 292
+H MH E I+ A L + K G +I+S+GTT+LR LE++ N F
Sbjct: 220 EHNMHFETFLIEDCVATRLENAKFLGKKILSIGTTTLRALESSYD-----NKLKKFKTGQ 274
Query: 293 --TNIFITPG--YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
TN+FI PG Y F+ VD+L +NFH P+STLLMLVS+F G + Y+ AI+ Y+F+
Sbjct: 275 QSTNLFIYPGKNYCFKFVDMLFTNFHTPQSTLLMLVSSFAGKDFVFSSYEEAINKGYKFF 334
Query: 349 SYGDTSLL 356
SYGD L+
Sbjct: 335 SYGDAMLV 342
>gi|293611107|ref|ZP_06693406.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292826759|gb|EFF85125.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 345
Score = 206 bits (523), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 132/360 (36%), Positives = 191/360 (53%), Gaps = 24/360 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP IA P+ R ++RL+ L DH+ +D+ D +V
Sbjct: 1 MQLSDFSFELPDELIARYPLESRSASRLL----QLDSKGQYHDHMFTDIIDLFEEGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G R I + ++ + + + S K G L F
Sbjct: 57 LNDTKVMKARLKGKR-----STGGAIEILVERMLNHTTAYCHIKSSNSPKAGAEL-FVGA 110
Query: 121 DGQSRLEATVIDKWNTGEILLV-FSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
D VI + + +V FS + + Q G +P+PPY R+ + D
Sbjct: 111 DN-----IPVIVRGRHENLFVVEFSQPILPVLEQ---YGQLPIPPYFNRE--AEEIDTER 160
Query: 180 YQTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT + + SVAAPTA LHF LL++L ++ FVTLHVGAGTFMPV+ +D +
Sbjct: 161 YQTVFHNPEKIASVAAPTASLHFDEELLAKLEQKNVQKSFVTLHVGAGTFMPVRTDDITN 220
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIF 296
H+MHSE + T + + K+RG +++++GTT+ R LE+A G I W+G T IF
Sbjct: 221 HVMHSEWCDVPQETIDLILATKARGNKVIAIGTTATRALESAAQAHGGKIAAWTGDTQIF 280
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY F VD L++NFHLP+STLLMLVSA + Y+HA+ YRF+SYGD L+
Sbjct: 281 IYPGYEFCIVDRLITNFHLPESTLLMLVSALSNRDNILAAYEHAVKSRYRFFSYGDAMLI 340
>gi|51246695|ref|YP_066579.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Desulfotalea psychrophila LSv54]
gi|81641194|sp|Q6AJA8|QUEA_DESPS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|50877732|emb|CAG37572.1| probable S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Desulfotalea psychrophila LSv54]
Length = 358
Score = 205 bits (522), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 121/349 (34%), Positives = 186/349 (53%), Gaps = 10/349 (2%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
+ + LP IA +P RD ++LMV++ + + + +++ ++N D ++ NNTK
Sbjct: 10 YYYHLPEENIAQKPADKRDHSKLMVLNTSTG---KVEHKIFNNVLEYINPGDMLIVNNTK 66
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSR 125
V A+L G + + ++R + + S+ K G L
Sbjct: 67 VFPARLTGHKESGGKVEVFLLELPTYIRPGVSESIALIKSSRKPKVGSTLTI-----NEA 121
Query: 126 LEATVIDKWNTGEILLVFSI-SGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTY 184
L V ++ G+ L +++ ++ +G IPLPPYI R+ D YQT Y
Sbjct: 122 LSCRVTEQLAGGKARLQLHYDKDVDVTEILAGIGEIPLPPYIKREEGTTPEDVTRYQTVY 181
Query: 185 AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEI 244
A + G+VAAPTAGLHFT LL L GI+ VTLHVG GTF PV+ E+ +H +H E
Sbjct: 182 ANVPGAVAAPTAGLHFTEELLQSLRENGIQFGEVTLHVGYGTFAPVRAENIVEHNIHEEF 241
Query: 245 GFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGYRF 303
+ T + + + GG+I +VGTT++R LE A + G I G+ ++I PG++F
Sbjct: 242 VSVGQETVDKIIATRKAGGKIWAVGTTTVRSLEFAAAQHGGQIAATEGWCALYIYPGFKF 301
Query: 304 RAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+ +D L++NFHLP S+L+ LVSA C E+ + YQ AI YRF+SYGD
Sbjct: 302 QVIDNLITNFHLPDSSLMFLVSALCRREKLLECYQMAIKEDYRFFSYGD 350
>gi|78184240|ref|YP_376675.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus sp. CC9902]
gi|123581889|sp|Q3AZ46|QUEA_SYNS9 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|78168534|gb|ABB25631.1| queuosine biosynthesis protein [Synechococcus sp. CC9902]
Length = 364
Score = 205 bits (522), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 137/358 (38%), Positives = 197/358 (55%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + + LPP RIA PV PR ARL++ V DL L S D +V
Sbjct: 7 QQLSSYAYHLPPERIAQAPVEPRHDARLLIAPGQTDGVQAARHQKVWDLLEELRSGDLLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS-WSVYARPSKVIKKGDILHFFS 119
N+T+V+ A++ + R +S L + + W ARP+K ++ GD+L
Sbjct: 67 VNDTRVLKARIK------VRRSGGGVSELLVLEPRGDGQWLCLARPAKRMRPGDLLTL-- 118
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSIS---GIELERQISLVGTIPLPPYIARKRPIDARD 176
DG + + + +G ++ F + +E ++ G +PLPPYI R P DA
Sbjct: 119 -DGTAITLRVLHEDPASGGRIVQFPLDCRDAESIEALLNQCGEVPLPPYIDRHDPGDAER 177
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
Y QT YA G+VAAPTAGLHF+ LL+ L G+ + +TLHVG GTF PV+ ED
Sbjct: 178 Y---QTRYADRPGAVAAPTAGLHFSDELLAALQGKGVGLARITLHVGLGTFRPVETEDLT 234
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-EDGIINPWSGFTNI 295
+HSE ++A +A+ + GR+++VGTTS+R LE A + G++ P++G N+
Sbjct: 235 QLELHSEWIEVNASVVEAIQQCR---GRVIAVGTTSVRALEGAAQLQGGVLKPFTGPVNL 291
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
I PGYRF V L++NFHLPKS+LL+LVSA G E+ +Y AI H YRF+SYGD
Sbjct: 292 VIQPGYRFAVVQGLLTNFHLPKSSLLLLVSALIGREKLLALYAEAIDHEYRFFSYGDA 349
>gi|262371071|ref|ZP_06064393.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter johnsonii SH046]
gi|262313957|gb|EEY95002.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter johnsonii SH046]
Length = 346
Score = 205 bits (522), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 140/368 (38%), Positives = 200/368 (54%), Gaps = 36/368 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F+FDLP IA P+ R ++RL+ +L D +D+ L++ D +V
Sbjct: 1 MQLSDFNFDLPDELIARYPLDTRSASRLL----HLDAQGQHHDFQFTDILDLLDTGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCH------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
N+TKV+ A+L G R + R + H++ S K G
Sbjct: 57 LNDTKVMKARLKGKRASGGAVEVLVERMQDAFIAHCHIKAS-----------NTPKAGAE 105
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
L G ++ TV+ + E L + S L + L G +P+PPY R+ +A
Sbjct: 106 LFI----GPDAVKVTVLGRH---ENLFIVEFSQPILTV-LDLYGQLPIPPYFNRE--AEA 155
Query: 175 RDYVDYQTTY---AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK 231
D YQT + K+ SVAAPTA LHF LL +L + GI+ FVTLHVGAGTF+PV+
Sbjct: 156 IDTERYQTVFNDPTKL-ASVAAPTASLHFDQKLLDQLEAKGIQKTFVTLHVGAGTFLPVR 214
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWS 290
D +HIMHSE + + + K+RG +++SVGTT+ R +E+A DG + W+
Sbjct: 215 TNDIANHIMHSEWCDVPEHAVELIRQTKARGNKVISVGTTATRAVESAAQAHDGELKAWT 274
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G T IFI PGY F+ VD L++NFHLP+STLLMLVSA + YQHA+++ YRF+SY
Sbjct: 275 GDTQIFIYPGYEFKVVDRLITNFHLPESTLLMLVSALSNRDNILAAYQHAVANQYRFFSY 334
Query: 351 GDTSLLFQ 358
GD L+ Q
Sbjct: 335 GDAMLVDQ 342
>gi|242281282|ref|YP_002993411.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Desulfovibrio salexigens DSM 2638]
gi|242124176|gb|ACS81872.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfovibrio salexigens DSM 2638]
Length = 366
Score = 205 bits (522), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 138/360 (38%), Positives = 197/360 (54%), Gaps = 21/360 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+K +DF+LP +IA P R ++LMV+ + + +D+ L +V N
Sbjct: 15 LKSYDFELPEEQIAQCPAVMRHGSKLMVLDQKTGETEIKN---FTDIVDLLPEGALLVAN 71
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHM-RVSPNSWSVYA------RPSKVIKKGDIL 115
N+KV+ A++ G + R E + L + + P S A R SK K GDI+
Sbjct: 72 NSKVVPARIFGKKPTG-GRVEFLLLTPLPLIKAEPTSDGYKAQARGLLRASKGPKTGDII 130
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
+F DG +L TV+ K G + SG +L++ G IPLPPYI +R D
Sbjct: 131 YF---DGGLKL--TVLGKGKFGLSEVELEWSG-DLKKIFEECGKIPLPPYI--RRAADET 182
Query: 176 DYVDYQTTYA--KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT YA + GSVAAPTAGLHF+ + +L + I+ VTL+VG GTF PV+ E
Sbjct: 183 DNDRYQTLYACDEKAGSVAAPTAGLHFSEEINEKLKAKNIERAEVTLYVGYGTFSPVRAE 242
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
D DH MH E I TA A+ K G +++VGTTS R LE A + G I + G T
Sbjct: 243 DIRDHEMHHEYIEIPEETAAAVIKAKEEGRPVIAVGTTSARTLEGAFQQTGEICEFKGET 302
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
NIFI PG+ F+ VD +++NFHLP+S+L++++SA G Y A+ + +RF+SYGD+
Sbjct: 303 NIFIYPGFEFKVVDRMITNFHLPESSLVIMISALAGRINVLNAYTEAVDNKFRFFSYGDS 362
>gi|111114843|ref|YP_709461.1| S-adenosylmethionine: tRNA ribosyltransferase- isomerase [Borrelia
afzelii PKo]
gi|216264010|ref|ZP_03436004.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein QueA) [Borrelia afzelii ACA-1]
gi|123145808|sp|Q0SPE3|QUEA_BORAP RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|110890117|gb|ABH01285.1| S-adenosylmethionine: tRNA ribosyltransferase- isomerase [Borrelia
afzelii PKo]
gi|215980054|gb|EEC20876.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein QueA) [Borrelia afzelii ACA-1]
Length = 346
Score = 205 bits (522), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 137/370 (37%), Positives = 199/370 (53%), Gaps = 42/370 (11%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF F+LP S IA P R S+RLMV+ P L + ++ V+++ ++NS+ IV
Sbjct: 1 MKTKEFHFNLPYSLIAQYPSEKRGSSRLMVLDPKLQK--IYHENSVNNILKYINSDTFIV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHM----RVSPNSWSVYARPSKVIKKGDILH 116
FNN+KV +++ E E+ + R+ + ++ SK G++
Sbjct: 59 FNNSKVRKSRMYA---------ESEMGSNVEFLILDRIGTDLFTALISKSKKQIVGNVYK 109
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIE--LERQISLVGTIPLPPYIARKRPIDA 174
F L ++ K N+ EI+L F+ E E+ G +P+PPYI KR D
Sbjct: 110 F-----PEGLMGKILSK-NSSEIVLKFNDDVREDYFEKH----GFVPIPPYI--KRDYDK 157
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D YQT Y+K GS A+ TAGLHF+ +L S I+ F+TLHVG GTF+PV+ +
Sbjct: 158 IDEDRYQTIYSKYVGSAASATAGLHFSRDLFSAFEKNNIEYDFITLHVGLGTFLPVRSKK 217
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF-- 292
++H MH E I A L + K G +++S+GTT+LR LE++ N F
Sbjct: 218 VEEHNMHFETFLIKDCVANRLENAKFLGKKVLSIGTTTLRALESSYD-----NKLKKFKT 272
Query: 293 ----TNIFITPG--YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYR 346
TN+FI PG Y F+ VD+L +NFH P+STLLMLVSAF G + Y+ I+ Y+
Sbjct: 273 GQQSTNLFIYPGKNYCFKFVDMLFTNFHTPQSTLLMLVSAFAGKDFVFSSYEEGINKGYK 332
Query: 347 FYSYGDTSLL 356
F+SYGD L+
Sbjct: 333 FFSYGDAMLV 342
>gi|193213085|ref|YP_001999038.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Chlorobaculum parvum NCIB 8327]
gi|238692648|sp|B3QPI5|QUEA_CHLP8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|193086562|gb|ACF11838.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Chlorobaculum parvum NCIB 8327]
Length = 340
Score = 205 bits (521), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 132/356 (37%), Positives = 184/356 (51%), Gaps = 23/356 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V+EFD+ LP RIA P R S RL+V+ I+ + + L L D +V
Sbjct: 1 MRVEEFDYTLPEERIATYPPAERGSTRLIVLDRAADS---ITHSVYASLHERLRPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN+KVI A+L I + L + A +K GD L
Sbjct: 58 LNNSKVIRARL-------IANKPTGGRIELMLLEKHEGVQNLALYRGRLKVGDRLLAHGA 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
E TV + G + S L G++P+PPY+ KR + D Y
Sbjct: 111 ------ELTVEALPDHG--VARLSCDTANLTELFEAHGSVPIPPYL--KRDAEEVDRERY 160
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A++ GSVAAPTA L+ T LL ++ + G+ V +TLHVG GTF+P++ E ++H+M
Sbjct: 161 QTVFAELPGSVAAPTASLNLTDELLEKIKAKGVDVVHITLHVGLGTFLPIRSETFEEHVM 220
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT---TEDGIINPWSGFTNIFI 297
H E I +A + K+RGGR+V+VGTT R LE A + SG +IFI
Sbjct: 221 HREFYNIPESSAHKIGEAKARGGRVVAVGTTVTRALEHAAPRLLDSDFSQEVSGEADIFI 280
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
PGY FR +D L++NFH P+ST+LML +AF G E ++ YQ A+ YRF SYGD+
Sbjct: 281 YPGYEFRIIDALLTNFHAPRSTVLMLTAAFAGKELLRRAYQEALERDYRFLSYGDS 336
>gi|33865206|ref|NP_896765.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus sp. WH 8102]
gi|46576935|sp|Q7U8E8|QUEA_SYNPX RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|33638890|emb|CAE07187.1| Queuosine biosynthesis protein [Synechococcus sp. WH 8102]
Length = 366
Score = 205 bits (521), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 141/358 (39%), Positives = 197/358 (55%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +D+ LP RIA P PR SAR+++V P +V DL L D +V
Sbjct: 7 LQLSSYDYPLPQERIAQVPAEPRHSARMLMVPPATQALEAARHGVVWDLLEELQPGDLLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV-SPNSWSVYARPSKVIKKGDILHFFS 119
NNT+V+ A+L + R +S L + W ARP+K ++ GD+L
Sbjct: 67 VNNTRVLKARLK------VRRSGGGLSELLVLEPRGEGRWLCLARPAKRMRPGDVLTI-- 118
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLV---GTIPLPPYIARKRPIDARD 176
DG S + D +G L+ F + E +L+ G +PLPPYI R P D
Sbjct: 119 -DGTSIGLTVLEDDAASGGRLVQFPTDCRDAETIETLLNQWGEVPLPPYIDRHDPDDVER 177
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
Y QT YA G+VAAPTAGLHF+ LL+ L G+++ +TLHVG GTF PV+ D
Sbjct: 178 Y---QTRYADRPGAVAAPTAGLHFSDELLAGLQLKGVELARITLHVGLGTFRPVETNDLT 234
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDG-IINPWSGFTNI 295
+HSE + A +A+ + GR+++VGTTS+R LE A ++G ++ P++G N+
Sbjct: 235 RLELHSEWVEVSAAVVEAIQRCR---GRVIAVGTTSVRALEGAAQQNGGVLQPFTGPVNL 291
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
I PGYRF V LM+NFHLPKS+LL+LVSA G E+ +Y AI YRF+SYGD
Sbjct: 292 VIQPGYRFAVVQGLMTNFHLPKSSLLLLVSALIGREKLLAIYTEAIERNYRFFSYGDA 349
>gi|262281067|ref|ZP_06058849.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter calcoaceticus RUH2202]
gi|262257298|gb|EEY76034.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter calcoaceticus RUH2202]
Length = 345
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 133/360 (36%), Positives = 192/360 (53%), Gaps = 24/360 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP IA P+ R ++RL+ +L DH+ +D+ D +V
Sbjct: 1 MQLSDFSFELPDELIARYPLESRSASRLL----HLDSKGQYHDHMFTDIIDLFEDGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G R I + ++ + + + S K G L F
Sbjct: 57 LNDTKVMKARLKGKR-----STGGAIEILVERMLNHTTAYCHIKSSNSPKAGAEL-FVGA 110
Query: 121 DGQSRLEATVIDKWNTGEILLV-FSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
D VI + + +V FS + + Q G +P+PPY R+ + D
Sbjct: 111 DN-----IPVIVRGRHENLFVVEFSEPILPVLEQ---YGQLPIPPYFNRE--AEEIDTER 160
Query: 180 YQTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT + + SVAAPTA LHF LL +L ++ FVTLHVGAGTFMPV+ +D +
Sbjct: 161 YQTVFHNPEKIASVAAPTASLHFDEVLLEKLEQKNVQKTFVTLHVGAGTFMPVRTDDITN 220
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIF 296
HIMHSE + T + + K+RG +++++GTT+ R LE+A G I W+G T IF
Sbjct: 221 HIMHSEWCDVPQETIDLILATKARGNKVIAIGTTATRALESAAQAHSGKIAAWTGDTQIF 280
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+F VD L++NFHLP+STLLMLVSA + Y+HA+ YRF+SYGD L+
Sbjct: 281 IYPGYQFCIVDRLITNFHLPESTLLMLVSALSNRDNILAAYEHAVKSRYRFFSYGDAMLI 340
>gi|203283951|ref|YP_002221691.1| S-adenosylmethionine-tRNA ribosyltransferase-isomerase (queuine
synthetase) [Borrelia duttonii Ly]
gi|201083394|gb|ACH92985.1| S-adenosylmethionine-tRNA ribosyltransferase-isomerase (queuine
synthetase) [Borrelia duttonii Ly]
Length = 352
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 138/366 (37%), Positives = 196/366 (53%), Gaps = 34/366 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF FDLP IA P R A+LMV+ + C + V+D+ ++ SN +V
Sbjct: 7 METKEFYFDLPHHLIAQYPSERRGLAKLMVL--DSICQKIYHTDSVNDILKYIGSNTFLV 64
Query: 61 FNNTKVITAQL-------NGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGD 113
FN+++V +++ V F +NR ++ ++++ +K K G
Sbjct: 65 FNDSRVRKSRIYAKTDYDGNVEFLILNR------------LTGDTFTSLISKAKRQKVGK 112
Query: 114 ILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
+ F QD L A +I K + E + F+ E G IPLPPYI KR D
Sbjct: 113 VYRF-PQD----LSAQIISKLD-NEFTIKFN--RYVDESYFEQYGFIPLPPYI--KRDYD 162
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT Y+K GS A+ TAGLHF+ L S+ I+ F+TLHVG GTF+PV+ +
Sbjct: 163 KEDEDRYQTIYSKYIGSSASATAGLHFSEELFSKFAQNNIEYDFITLHVGLGTFLPVRTK 222
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWSGF 292
+ H MH E I A L KS G +I++VGTT+LR LE+A + G
Sbjct: 223 TIEKHKMHFESFSIRDSVACRLERAKSLGKKILAVGTTTLRALESAYDKQKGRFTRGEQK 282
Query: 293 TNIFITPG--YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
TN+FI PG Y+F++VD+L +NFH P+STLLMLVS+F G + Y+ A++ YRF+SY
Sbjct: 283 TNLFIYPGKNYKFKSVDMLFTNFHTPESTLLMLVSSFGGKDFVFNAYREAVTMNYRFFSY 342
Query: 351 GDTSLL 356
GD +L
Sbjct: 343 GDATLF 348
>gi|283853697|ref|ZP_06370927.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfovibrio sp. FW1012B]
gi|283570907|gb|EFC18937.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfovibrio sp. FW1012B]
Length = 368
Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 137/364 (37%), Positives = 191/364 (52%), Gaps = 21/364 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ + FDLP RIA RP RD+ RLM V+ + D + +DLP L +V
Sbjct: 14 LLAAYHFDLPEDRIANRPCARRDACRLMTVNRATGA---VGDAVFADLPDLLPEGALLVA 70
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN---SWSVYA-----RPSKVIKKGD 113
NNTKV +L G + ++ +R + + W+ R S+ + GD
Sbjct: 71 NNTKVAPVRLLGRKPTGGAAEFLLVTPIALLRATTDPATGWTSAPAAGLLRVSRPPRPGD 130
Query: 114 ILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
+ F L T + G +V S G L + +G +PLPPYI +R D
Sbjct: 131 RIDFAPD-----LCITATRRGAFGHTEVVLSWQG-SLPAVMDRIGHVPLPPYI--RRADD 182
Query: 174 ARDYVDYQTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK 231
A D YQT YA GS AAPTAGLHFT +LL RL + G VT HVG GTF PV+
Sbjct: 183 AADRETYQTVYASDDKLGSAAAPTAGLHFTEDLLERLRARGFGFATVTCHVGIGTFSPVR 242
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSG 291
V D +H MH E + A A+ + K+ G +V+VGTT+ R LE E G + P++G
Sbjct: 243 VADIREHAMHREWIEVPQEAATAVLAAKAAGRPVVAVGTTAARTLEGVVREAGEVRPFAG 302
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T+IFI PG+ F+ VD +++NFHLP S+L+++++A G E Y AI+ YRF+SYG
Sbjct: 303 ETDIFIRPGHAFQVVDGMVTNFHLPGSSLVIMLAALVGRENLLAAYARAIASGYRFFSYG 362
Query: 352 DTSL 355
D L
Sbjct: 363 DAML 366
>gi|203287494|ref|YP_002222509.1| S-adenosylmethionine-tRNA ribosyltransferase-isomerase (queuine
synthetase) [Borrelia recurrentis A1]
gi|201084714|gb|ACH94288.1| S-adenosylmethionine-tRNA ribosyltransferase-isomerase (queuine
synthetase) [Borrelia recurrentis A1]
Length = 352
Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 138/366 (37%), Positives = 196/366 (53%), Gaps = 34/366 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF FDLP IA P R A+LMV+ + C + V+D+ ++ SN +V
Sbjct: 7 METKEFYFDLPHHLIAQYPSERRGLAKLMVL--DSICQKIYHTDSVNDILKYIGSNTFLV 64
Query: 61 FNNTKVITAQL-------NGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGD 113
FN+++V +++ V F +NR ++ ++++ +K K G
Sbjct: 65 FNDSRVRKSRIYAKTDYDGNVEFLILNR------------LTGDTFTSLISKAKRQKVGK 112
Query: 114 ILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
+ F QD L A +I K + E + F+ E G IPLPPYI KR D
Sbjct: 113 VYRF-PQD----LSAQIISKLD-NEFTIKFN--RYVDESYFEQYGFIPLPPYI--KRDYD 162
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT Y+K GS A+ TAGLHF+ L S+ I+ F+TLHVG GTF+PV+ +
Sbjct: 163 KEDEDRYQTIYSKYIGSSASATAGLHFSEELFSKFAQNNIEYDFITLHVGLGTFLPVRTK 222
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWSGF 292
+ H MH E I A L KS G +I++VGTT+LR LE+A + G
Sbjct: 223 TIEKHKMHFESFSIRDSVACRLERAKSLGKKILAVGTTTLRALESAYDKQKGRFTRGEQK 282
Query: 293 TNIFITPG--YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
TN+FI PG Y+F++VD+L +NFH P+STLLMLVS+F G + Y+ A++ YRF+SY
Sbjct: 283 TNLFIYPGKNYKFKSVDMLFTNFHTPESTLLMLVSSFGGKDFVFDAYREAVTMNYRFFSY 342
Query: 351 GDTSLL 356
GD +L
Sbjct: 343 GDATLF 348
>gi|189346056|ref|YP_001942585.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Chlorobium
limicola DSM 245]
gi|238692192|sp|B3EGG9|QUEA_CHLL2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|189340203|gb|ACD89606.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Chlorobium
limicola DSM 245]
Length = 343
Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 133/361 (36%), Positives = 189/361 (52%), Gaps = 26/361 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +FD+ LP IA P R + RL+V+ P ++H + L FL D +
Sbjct: 1 MKVSDFDYTLPEDMIARYPPAERGTTRLLVLDPATGE----TEHSRYAHLADFLKPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
+ NN+KV+ A++ ++ S L + +KKGD L S
Sbjct: 57 LLNNSKVVRARM-------FASKKTGASIELMLLEKHEGVQNLVLYRGRLKKGDRLIAHS 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSIS-GIELERQISLVGTIPLPPYIARKRPIDARDYV 178
++ ++ + TG+ + S S G +L +P+PPY+ KR +A D
Sbjct: 110 EE--------LLVEEITGQGVARLSASDGSDLPHLFERHAEVPIPPYL--KREAEAVDAE 159
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT +A+ GSVAAPTA L+ T+ LL+ L GI VTLHVG GTF+P++VE ++H
Sbjct: 160 RYQTVFAEQPGSVAAPTASLNMTAGLLAELGQKGIDTATVTLHVGLGTFLPIRVESFEEH 219
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED---GIINPWSGFTNI 295
+MH E I T + K+ GGR+V+VGTT R LE A + P SG +I
Sbjct: 220 VMHREYYSIPFRTIDKIRRTKAGGGRVVAVGTTVTRALEHAAGSSCWGTSVAPASGEADI 279
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGYRFR +D L++NFH P+ST+LML +AF G + Y AI YRF SYGD+ L
Sbjct: 280 FIYPGYRFRVIDALLTNFHAPRSTVLMLTAAFAGQQNLLSAYHEAIEKQYRFLSYGDSML 339
Query: 356 L 356
+
Sbjct: 340 I 340
>gi|189500747|ref|YP_001960217.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Chlorobium
phaeobacteroides BS1]
gi|189496188|gb|ACE04736.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Chlorobium
phaeobacteroides BS1]
Length = 341
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 133/362 (36%), Positives = 200/362 (55%), Gaps = 28/362 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V ++ + LP S IA+ P R + RL V+ I+ L +DL F+ D +V
Sbjct: 1 MKVSDYAYLLPESSIAIYPPRDRGATRLEVLDRRTGA---ITHALYADLDRFVGPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN+KV+ A+L F + + L + + V R +K GD+L SQ
Sbjct: 58 LNNSKVVNARL----FAQKTTGAR-VELVLLEKHGEHQELVMYRGR--LKSGDVL--LSQ 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSIS-GIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ +E+ GE + S S G + + G +P+PPY+ KR ++ D
Sbjct: 109 GCRLFVESV------EGEGVARISCSDGRTVPDFFAEHGEVPIPPYL--KRDVEEVDRER 160
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A+I GSVAAPTA L+ T LL+ L S G+++ +VTLHVG GTF+P++ +D + H+
Sbjct: 161 YQTVFAEIPGSVAAPTASLNMTGQLLNSLQSKGVELAYVTLHVGLGTFLPIRGDDLEAHV 220
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPW-----SGFTN 294
MH E ++ + T + + +VK GGR+++VGTT R LE A + GI P +G +
Sbjct: 221 MHREHYYLPSETVRKIQNVKKEGGRVIAVGTTVTRSLEHAAS--GINAPGDPKEITGEAD 278
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PG F +D L++N+H P+ST+LML +AF G + KK Y A+ YRF SYGD+
Sbjct: 279 IFIYPGCSFSVIDGLLTNYHAPRSTVLMLTAAFAGWDNLKKAYDEALEKGYRFLSYGDSM 338
Query: 355 LL 356
L+
Sbjct: 339 LI 340
>gi|78186439|ref|YP_374482.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Chlorobium
luteolum DSM 273]
gi|91207390|sp|Q3B5E2|QUEA_PELLD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|78166341|gb|ABB23439.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Chlorobium
luteolum DSM 273]
Length = 341
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 126/367 (34%), Positives = 189/367 (51%), Gaps = 36/367 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD+ LP RIA P R S RL+V+ +S +L FL D +V
Sbjct: 1 MRVADFDYPLPEERIAKYPPLQRGSTRLLVICREGGT---VSHARYRELDTFLRKGDLLV 57
Query: 61 FNNTKVITAQL-------NGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGD 113
NNT+V+ A+L + + + +E S L +K+GD
Sbjct: 58 LNNTRVVKARLMAEKSTGAAIELMLLEKHGQEQSLVLF--------------RGRVKQGD 103
Query: 114 ILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
L G L ++D + + G ++ +P+PPY+ +RP +
Sbjct: 104 RLR---SHGHEFLVEEIVDHG----VARLSLPEGRSIQPVFEAHAEVPIPPYL--RRPAE 154
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT +A+ GSVAAPTA L+ T LL RL G++ +TLHVG GTF+P++V+
Sbjct: 155 PVDRERYQTVFAEHAGSVAAPTASLNMTPELLLRLRDGGVETSSITLHVGLGTFLPIRVD 214
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT---TEDGIINPWS 290
++H+MH E I A T + + + K+ GGRI+++GTT R LE A + P
Sbjct: 215 SMEEHVMHREFYSIPAATIEKIRATKASGGRIIALGTTVTRALEHAALSLSGHSGPGPLE 274
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G +IFI PG FR +D L++NFH P+ST+LML +AF G + ++ Y+ A+ YRF SY
Sbjct: 275 GEADIFIYPGCSFRLIDALLTNFHAPRSTVLMLTAAFAGPDLLRRAYREALDKEYRFLSY 334
Query: 351 GDTSLLF 357
GD++L+
Sbjct: 335 GDSTLIL 341
>gi|329960192|ref|ZP_08298634.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides fluxus YIT 12057]
gi|328532865|gb|EGF59642.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides fluxus YIT 12057]
Length = 409
Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 140/418 (33%), Positives = 212/418 (50%), Gaps = 84/418 (20%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ EF++ LP RIA P+ RD ++L++ +S+ + + LP +L+S ++FN
Sbjct: 10 ISEFNYPLPDKRIAKFPLPLRDQSKLLIYRHG-----EVSEDVFTSLPGYLSSGSLMIFN 64
Query: 63 NTKVITAQLNGVR--------FCH---------INRREKEISCTLHMRVSPNSWSVYARP 105
NTKVI A+L+ + FC +N ++ E + L M + W
Sbjct: 65 NTKVIQARLHFRKETGALIEVFCLEPIQPNDYVLNFQQTEHAAWLCMIGNLKKWKEGVLI 124
Query: 106 SKVIKKGDILHFFSQDGQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPP 164
++ KG L ++ G+ R + +D +WN EI + + I + + G +P+PP
Sbjct: 125 REMTVKGKPLTLTAERGECRGTSHWVDFRWNNPEI----TFADI-----LEVFGELPIPP 175
Query: 165 YIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
Y+ R+ D YQT Y+KI+GSVAAPTAGLHFT +L L G+ + +TLHVGA
Sbjct: 176 YLNRE--TQESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALKEKGVDLEELTLHVGA 233
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET------ 278
GTF PVK E+ + H MH+E +I T L + + G+ ++VGTTS+R LE+
Sbjct: 234 GTFKPVKSEEIEGHEMHTE--YISV-TRNTLKKLIAHEGKAIAVGTTSVRTLESLYHIGV 290
Query: 279 -------ATTEDGIINPWSGF---------------------------------TNIFIT 298
AT E+ + W + T I I
Sbjct: 291 TLYNTPDATEEELHVRQWQPYEMTGESTAIPATDALQAILRYLDRHGMETLHTSTQIIIA 350
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY +R V +++NFH P+STLL+LVSAF + KK+Y +A+ H +RF SYGD+SLL
Sbjct: 351 PGYEYRIVKAMVTNFHQPQSTLLLLVSAFVH-GDWKKIYDYALGHDFRFLSYGDSSLL 407
>gi|224534863|ref|ZP_03675432.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
spielmanii A14S]
gi|224513803|gb|EEF84128.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
spielmanii A14S]
Length = 346
Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 138/369 (37%), Positives = 200/369 (54%), Gaps = 40/369 (10%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF F+LP S IA P R S+RLMV+ P L + ++ V+++ ++NS+ IV
Sbjct: 1 MKTKEFHFNLPYSLIAQYPSEKRGSSRLMVLDPKLQE--IYHENSVNNILKYINSDTFIV 58
Query: 61 FNNTKVITAQL-------NGVRFCHINRREKEISCTLHMRVSPN-SWSVYARPSKVIKKG 112
FNN+KV +++ + V F +++ + ++ L + SVY P +I G
Sbjct: 59 FNNSKVRKSRIYAESELGSDVEFLILDKIDTDLFTALISKSKKQIVGSVYKFPEGLI--G 116
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGEILLVFS--ISGIELERQISLVGTIPLPPYIARKR 170
IL S++G EI+L F + E+ G +P+PPYI KR
Sbjct: 117 KIL---SKNG--------------SEIVLKFDNDVGEDYFEKH----GFVPIPPYI--KR 153
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
D D YQT Y+K GS A+ TAGLHF+ +L + I+ F+TLHVG GTF+PV
Sbjct: 154 DYDKIDEDRYQTIYSKYVGSAASATAGLHFSRDLFTFFEKNNIEYDFITLHVGLGTFLPV 213
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPW 289
+ + ++H MH E I A L K G +I+S+GTT+LR LE++ ++
Sbjct: 214 RSKKVEEHNMHFETFLIKDCVADRLEKAKFLGKKILSIGTTTLRALESSYDDELKKFKTG 273
Query: 290 SGFTNIFITPG--YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
TN+FI PG Y F+ VD+L +NFH P+STLLMLVSAF G + Y+ AI Y+F
Sbjct: 274 QQSTNLFIYPGKNYCFKFVDMLFTNFHTPQSTLLMLVSAFAGKDFVFSSYEEAIKKGYKF 333
Query: 348 YSYGDTSLL 356
+SYGD L+
Sbjct: 334 FSYGDAMLV 342
>gi|226954457|ref|ZP_03824921.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Acinetobacter sp. ATCC 27244]
gi|226834806|gb|EEH67189.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Acinetobacter sp. ATCC 27244]
Length = 349
Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 136/359 (37%), Positives = 195/359 (54%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F FDLP IA P+ R ++RL+ ++ DH +D+ L D +V
Sbjct: 6 MQLSDFSFDLPDELIARYPLESRSASRLL----HIDTQGQYHDHAFTDILDLLEDGDLLV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G R I + + ++ + + S K G L+
Sbjct: 62 LNDTKVMKARLKGKRAT-----GGAIEVLVERMLDTHTAHCHIKSSNSPKAGAELYI--- 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ + TV + E L V S L + G +P+PPY R+ + D Y
Sbjct: 114 -GEDAVPVTVQGRH---ENLFVVKFSQPILSV-LDQYGQLPIPPYFNRE--AEEIDTERY 166
Query: 181 QTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
QT + + SVAAPTA LHF +LL +L + G++ FVTLHVGAGTFMPV+ D +H
Sbjct: 167 QTVFHDPEKIASVAAPTASLHFDQSLLEKLATKGVQKTFVTLHVGAGTFMPVRTTDITNH 226
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFI 297
IMHSE + T + + K+RG ++++VGTT+ R LE+A + G I W+G T IFI
Sbjct: 227 IMHSEWCDVPQATIDLILATKARGNKVIAVGTTATRALESAAQANQGQIAAWTGDTQIFI 286
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+F VD L++NFHLP+STLLMLVSA + Y+HA+ YRF+SYGD L+
Sbjct: 287 YPGYQFCIVDRLITNFHLPESTLLMLVSALSNRDNILAAYKHAVEQRYRFFSYGDAMLI 345
>gi|304413742|ref|ZP_07395186.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Candidatus Regiella insecticola LSR1]
gi|304283833|gb|EFL92227.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Candidatus Regiella insecticola LSR1]
Length = 413
Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 139/413 (33%), Positives = 204/413 (49%), Gaps = 72/413 (17%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + I+ + +D+ L + D +V
Sbjct: 1 MRVDDFSFELPGSLIAHYPHTQRSGCRLLSLDGQNGN---ITHGVFTDVLDKLQAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + ++ + + + + + SK K G L Q
Sbjct: 58 FNDTRVIPARLFGKKAS-----GGKLEILVERLLDKHRVLAHIKASKAPKPGTQL----Q 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARKRPIDARD 176
G + E T I + +F + + +R + +G IPLPPYI P + D
Sbjct: 109 LGDDKSEHTAIQATVLARLDNLFELR-FDDQRDVLTILRAIGHIPLPPYI--DSPDEKSD 165
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT Y++ G+VAAPTAGLHF LL L GI++ FVTLHVGAGTF P++V++ +
Sbjct: 166 RELYQTVYSQRPGAVAAPTAGLHFDQPLLDALRKKGIEMAFVTLHVGAGTFQPIRVKNIE 225
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-------------- 282
+H MH+E + +A+ + K+RG R+++VGTTS+R LE+A +
Sbjct: 226 EHSMHAEYAEVPQTVVEAVLACKARGKRVIAVGTTSVRSLESAAMQRAEKNENIPFAFEA 285
Query: 283 ---------------------------------------DGIINPWSGFTNIFITPGYRF 303
+ +I P+ G T IFI PGY +
Sbjct: 286 AALLAADIRPNHVVDLRSSGRTPWPPSGNFKDCGYNPGSNALIMPFFGDTRIFIYPGYHY 345
Query: 304 RAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ VD L++NFHLPKSTL+MLV+AF G + T YQ AI YRF+SYGD +
Sbjct: 346 QIVDGLITNFHLPKSTLIMLVAAFAGYKNTMAAYQLAIEKEYRFFSYGDAMFI 398
>gi|116071115|ref|ZP_01468384.1| queuosine biosynthesis protein [Synechococcus sp. BL107]
gi|116066520|gb|EAU72277.1| queuosine biosynthesis protein [Synechococcus sp. BL107]
Length = 364
Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 136/358 (37%), Positives = 196/358 (54%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +D+ LPP RIA PV PR ARL++ + V +L L D +V
Sbjct: 7 QQLSSYDYHLPPERIAQAPVEPRHDARLLISPGQADGVRAVRHQKVWNLLEELRPGDLLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV-SPNSWSVYARPSKVIKKGDILHFFS 119
N+T+V+ A+L + R S L + W ARP+K ++ GD+L
Sbjct: 67 VNDTRVLKARLK------VRRSGGGASELLVLEPRGEGQWLCLARPAKRMRPGDLLTI-- 118
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSIS---GIELERQISLVGTIPLPPYIARKRPIDARD 176
+G + + + +G ++ F + +E ++ G +PLPPYI R P DA
Sbjct: 119 -EGTAITLRVLHEDPASGGRIVQFPLDCRDAESIEALLNQCGEVPLPPYIDRHDPADAER 177
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
Y QT YA G+VAAPTAGLHF+ LL+ L G+ + +TLHVG GTF PV+ ED
Sbjct: 178 Y---QTRYADRPGAVAAPTAGLHFSDELLAGLQRKGVGLARITLHVGLGTFRPVETEDLT 234
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-EDGIINPWSGFTNI 295
+HSE ++A +A+ + GR+++VGTTS+R LE A + G++ P++G N+
Sbjct: 235 QLELHSEWIEVNASVVEAIQQCR---GRVIAVGTTSVRALEGAAQLQGGVLKPFTGPVNL 291
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
I PGYRF V L++NFHLPKS+LL+LVSA G E+ +Y AI H YRF+SYGD
Sbjct: 292 VIQPGYRFAVVQGLLTNFHLPKSSLLLLVSALIGREKLLALYAEAIDHEYRFFSYGDA 349
>gi|110598218|ref|ZP_01386494.1| Queuosine biosynthesis protein [Chlorobium ferrooxidans DSM 13031]
gi|110340133|gb|EAT58632.1| Queuosine biosynthesis protein [Chlorobium ferrooxidans DSM 13031]
Length = 346
Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 124/360 (34%), Positives = 194/360 (53%), Gaps = 19/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F + LP ++IA +P PRD RLMV++ I + D+ ++ D ++
Sbjct: 1 MRLSNFRYTLPKTKIADQPTEPRDKCRLMVLNRRKKD---IDHKMFDDIVSYFKKGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV---SPNSWSVYARPSKVIKKGDILHF 117
NN++V A++ F + + +I L +RV W V P++ ++ G+ ++F
Sbjct: 58 LNNSRVFPAKI----FGQKEKTDAKIEVFL-LRVLNKEAGLWDVLVDPARKVRVGNKIYF 112
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+ + A V+D + + F I++ + +G IPLPPY R P+++ D
Sbjct: 113 -----EEDVVAEVVDNTTSRGRTIRFLNPEIDVFSLVERIGNIPLPPYFTRP-PVES-DK 165
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
+YQT YA G+V AP AGLHFT LL ++ IG+K+ +TLH TF ++VED
Sbjct: 166 ENYQTVYASQTGAVVAPMAGLHFTMPLLQKIQKIGVKILPITLHPSLSTFNAIEVEDVSK 225
Query: 238 HIMHSEIGFIDAPTAQALNSVK-SRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I TA +N K ++ GRI++VGTT+ R+LE T DG I G+T+ F
Sbjct: 226 HKMDSEYFNIPYQTAMEINETKVNKTGRIIAVGTTTCRVLEANATVDGKIKFGRGWTDKF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y+F+ D L++NF P++TLLM VSAF + Y+ A+ Y+F +YGD +
Sbjct: 286 IYPPYQFKVTDALLTNFQQPETTLLMAVSAFAEHRLLMEAYKTALKGDYQFLAYGDAMFI 345
>gi|315187237|gb|EFU20994.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Spirochaeta thermophila DSM 6578]
Length = 337
Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 136/356 (38%), Positives = 189/356 (53%), Gaps = 20/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +K+F FDLP IA P R+ ARLMVVH I V +LP L + +V
Sbjct: 1 MKLKDFYFDLPEDLIAQHPSQRREDARLMVVHRETGR---IEHSYVRELPLILPPS-CLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+V +++ R ++ L V P+ W ++ + G +
Sbjct: 57 FNDTRVRKSRILATR----RDSGGKVEILLLEEVEPSLWKALVSRTRRQRAGVVY----- 107
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D EA ++ + L + IS E + G +PLPPYI KR D Y
Sbjct: 108 DLPGGREAEIV---GMEDGLRLVRISPPIDEAYLDRHGHVPLPPYI--KRADLPEDEERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ GS AAPTAGLHFT L+ L S V F+TLHVG GTF PV+ E+ ++H M
Sbjct: 163 QTVFARHPGSAAAPTAGLHFTPALMDELKSRHT-VTFLTLHVGLGTFQPVRTENVEEHRM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E I TA+ + S KSR + +VGTTS R LE+A + W T+++I PG
Sbjct: 222 HTERFHISEETARVIESAKSRHIPVCAVGTTSTRALESAWEHGRLKRGWQE-TSLYIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+ +D L +NFH P S+L++LVSAF G + + Y+ AI H YRF+SYGD L+
Sbjct: 281 YTFKVIDHLFTNFHTPGSSLILLVSAFLGKDLLLEAYRKAIEHRYRFFSYGDAMLI 336
>gi|119357442|ref|YP_912086.1| queuosine biosynthesis protein [Chlorobium phaeobacteroides DSM
266]
gi|119354791|gb|ABL65662.1| Queuosine biosynthesis protein [Chlorobium phaeobacteroides DSM
266]
Length = 346
Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 121/360 (33%), Positives = 196/360 (54%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F + LP ++IA +P PRDS RLMV++ I D+ + D +V
Sbjct: 1 MRLSNFRYILPKTKIAEKPASPRDSCRLMVLNRRKKE---IDHKNFEDISGYFKKGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
NN++V A++ G + + + +I L ++ ++ W V P++ ++ G+ ++F
Sbjct: 58 VNNSRVFPAKIFGQK----EKTDAKIEVFLLRVLNKDAGLWDVLVDPARKVRVGNKIYF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ A V+D + + F +++ + +G +PLPPY R P+D+ D
Sbjct: 113 ----DEDIVAEVVDNTTSRGRTIRFLNPEVDVFSLVERIGHVPLPPYFTR-LPVDS-DKE 166
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT YA G+V AP AG+HFT LL ++ +G+K+ +TLH TF ++VED H
Sbjct: 167 DYQTVYASQTGAVVAPMAGMHFTMPLLQKIQKMGVKILPITLHPSLSTFNAIEVEDVSKH 226
Query: 239 IMHSEIGFIDAPTAQALNSVK-SRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
M SE I TA +N K ++ GR+++VGT++ R+LE T DG I SG+T+ FI
Sbjct: 227 KMDSEYFNIPYQTAMEINETKINKTGRVIAVGTSTCRVLEANATVDGKIKFGSGWTDKFI 286
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
P Y+F+ D L++NF P++TLLM+VSAF Y+ A+ Y+F +YGD ++
Sbjct: 287 YPPYQFKVTDALITNFQQPETTLLMVVSAFAEHRLLMDAYKVALKSEYQFLAYGDAMFIY 346
>gi|227874424|ref|ZP_03992605.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Oribacterium sinus F0268]
gi|227839740|gb|EEJ50189.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Oribacterium sinus F0268]
Length = 207
Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 100/207 (48%), Positives = 134/207 (64%), Gaps = 5/207 (2%)
Query: 146 SGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLL 205
SGI E + +G +PLPPYI K D Y T YAK +GS AAPTAGLH+T LL
Sbjct: 1 SGI-FEEVLDQLGEMPLPPYITHK----LEDRTRYNTVYAKEEGSAAAPTAGLHWTKELL 55
Query: 206 SRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRI 265
+ + G+++ +TLHVG GTF PVK+E+ + H MHSE + A+ + + K RGGR+
Sbjct: 56 EQCEAKGVEILRITLHVGLGTFRPVKMEEVEKHHMHSEYYSVSQEVAEKIEASKKRGGRV 115
Query: 266 VSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVS 325
+ GTTS R LE+A E G I SG+T+IFI PG+ F+ +D L++NFHLP+STLLMLVS
Sbjct: 116 ICTGTTSCRALESAARESGKIEAKSGWTDIFIYPGFSFKVMDALITNFHLPESTLLMLVS 175
Query: 326 AFCGIEETKKMYQHAISHAYRFYSYGD 352
A E+ Y+ A+ YRF+S+GD
Sbjct: 176 ALSSREKILHAYEEAVKEKYRFFSFGD 202
>gi|78187173|ref|YP_375216.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Chlorobium
luteolum DSM 273]
gi|78167075|gb|ABB24173.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Chlorobium
luteolum DSM 273]
Length = 346
Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 123/360 (34%), Positives = 190/360 (52%), Gaps = 19/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F + LP ++IA P PRDS ++MV++ I + D+ ++ D ++
Sbjct: 1 MRLSNFRYTLPKTKIADHPADPRDSCKMMVLNRRKKD---IEHKVFEDIASYFKKGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV---SPNSWSVYARPSKVIKKGDILHF 117
NN++V A++ F + + +I L +RV W V P++ ++ G+ ++F
Sbjct: 58 LNNSRVFPAKI----FGQKEKTDAKIEVFL-LRVLNREAGLWDVLVDPARKVRVGNKIYF 112
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+ A V+D + + F I++ + +G +PLPPY RK D
Sbjct: 113 -----DEDVVAEVVDNTTSRGRTIRFLNPEIDVFSLVDRIGNVPLPPYFTRKS--KDSDK 165
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
+YQT YA GSV AP AGLHFT LL ++ IG+KV +TLH TF ++VED
Sbjct: 166 ENYQTVYANQTGSVVAPMAGLHFTMPLLQKIQKIGVKVLPITLHPSLSTFNAIEVEDVSK 225
Query: 238 HIMHSEIGFIDAPTAQALNSVK-SRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I TA +N K + GR+++VGTT+ R+LE T DG I G+T+ F
Sbjct: 226 HKMDSEYFNIPYQTAMEINETKMKKSGRVIAVGTTTCRVLEANATVDGKIKFGQGWTDKF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y+F+ D L++NF P++TLLM+VSAF Y+ A+ + Y+F +YGD +
Sbjct: 286 IYPPYQFKVTDALVTNFQQPETTLLMVVSAFAEHRLLMDAYKVALKNDYKFLAYGDAMFI 345
>gi|257461414|ref|ZP_05626510.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter gracilis RM3268]
gi|257441137|gb|EEV16284.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter gracilis RM3268]
Length = 339
Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 141/361 (39%), Positives = 193/361 (53%), Gaps = 32/361 (8%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+V +D++LP IA PV P+ SARL++ I+ DL L D I+F
Sbjct: 6 LVGSYDYELPSELIASAPVMPKQSARLLIYD---RAKQQITHAHFGDLADALPPCD-IIF 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+VI A+L F H N K I L+ + N +S Y R S +K G L F
Sbjct: 62 NDTRVIKARL----FGHKNSGGK-IELLLNSPLEGNKFSAYIRGS--VKVGSELKF---- 110
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQ-----ISLVGTIPLPPYIARKRPIDARD 176
QS LEA V + G ++ F G L +G +PLPPYI KR +D
Sbjct: 111 -QSGLEARVCELMEGGLRIVQFECGGKALNTHDVFEICERIGHVPLPPYI--KRADTKQD 167
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQ+ +A+ QG+VAAPTA LHF +L+ L ++YF+TLHVGAGTF PV+V D
Sbjct: 168 VSWYQSIFAREQGAVAAPTASLHFNDAMLNDLRKRH-EIYFITLHVGAGTFKPVEVADLR 226
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+H MH E+ I T Q L S + +I+ VGTT R +E SG +F
Sbjct: 227 EHKMHGELYSIPPQTTQILKSER----KILGVGTTVTRTIENFARN----GQSSGICELF 278
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ PG + L++NFHLPKSTL+MLV++F G+E T ++Y+ A+ YRFYSYGD L+
Sbjct: 279 LHPGNPPIRQNFLLTNFHLPKSTLIMLVASFIGLERTLELYRIAVEKRYRFYSYGDGMLV 338
Query: 357 F 357
Sbjct: 339 L 339
>gi|317486110|ref|ZP_07944957.1| tRNA ribosyltransferase-isomerase [Bilophila wadsworthia 3_1_6]
gi|316922633|gb|EFV43872.1| tRNA ribosyltransferase-isomerase [Bilophila wadsworthia 3_1_6]
Length = 365
Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 136/367 (37%), Positives = 193/367 (52%), Gaps = 26/367 (7%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ + ++LPP RIA P R ++RL+V+ + I H S L +L ++
Sbjct: 12 LLSSYRYELPPERIAQHP-GERGASRLLVL--DRETGKRIHSHF-SHLLEYLPKGTLLIA 67
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCT----LHMRVSPNSWSVYA-----RPSKVIKKG 112
NN++V+ A++ G R + + + T L + W +P+K + G
Sbjct: 68 NNSRVVPARMIGQRPS--GGKMEFLLLTPMPLLEQHGEGDGWHCAEADGLIKPAKNARIG 125
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
D L F D L V+ K G + +G ++ G +PLPPYI R+
Sbjct: 126 DYL-VFGDD----LRVEVLAKGEFGRHRVRLHWTG-DIRALFESRGHLPLPPYIKREDTK 179
Query: 173 DARDYVDYQTTYAK--IQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
D R YQT YA+ GSVAAPTAGLHFT L +++ S G++ VTLHVG GTF PV
Sbjct: 180 DDRG--TYQTVYARDDKAGSVAAPTAGLHFTPELRAQMASAGVEWAEVTLHVGYGTFSPV 237
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE-TATTEDGIINPW 289
+ ED +H+MH E + T A+ K+ G +++VGTTS R LE A G +
Sbjct: 238 RCEDIREHVMHEEFVEVPQATVDAIGKAKAEGRPVIAVGTTSARTLEGVAGAHGGELTAH 297
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
G+ N FI PGYRF +D L++NFHLP+STLLMLVSA G E + Y A+ YRF+S
Sbjct: 298 QGWINCFIWPGYRFHVLDGLITNFHLPESTLLMLVSALTGRERMLETYTEAVKMEYRFFS 357
Query: 350 YGDTSLL 356
YGD L+
Sbjct: 358 YGDAMLI 364
>gi|222823668|ref|YP_002575242.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter lari RM2100]
gi|222538890|gb|ACM63991.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter lari RM2100]
Length = 342
Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 133/361 (36%), Positives = 201/361 (55%), Gaps = 32/361 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+++ +D++LP IA P+ P+++A+L+V C IS DL L + I+
Sbjct: 8 LLLSSYDYNLPNELIANFPILPKENAKLLVYE---RCKDQISHLHFKDLAKILPPCE-II 63
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI A++ G + +I ++ + N + V R +K+G IL+F
Sbjct: 64 FNDTKVIKARIYGNK-----ESGSKIELFINHPLKNNDFLVQIRGK--VKEGQILYF--- 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQ-----ISLVGTIPLPPYIARKRPIDAR 175
++ L+A + + G + F EL + +G IPLPPYI KR +A+
Sbjct: 114 --ENSLKAKIKKLHDDGTREVEFFNDEKELNHHEVFEILEKIGHIPLPPYI--KRADEAQ 169
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D ++YQ+ +AK QG+VAAPTA LHF +++ L ++ +TLHVGAGTF V+ ED
Sbjct: 170 DNINYQSIFAKNQGAVAAPTASLHFDETMINELKK-NHNIHTITLHVGAGTFKGVECEDI 228
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+H MHSE ID T ++S K +I+ VGTT R +E + GF ++
Sbjct: 229 RNHKMHSEFFHIDDETCVLIDSSK----KILGVGTTVTRCIEYYHRK----KIKEGFCDL 280
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
F+ P + +D L++NFHLPKSTL+MLV+AF G E+T K+Y AI + YRFYSYGD L
Sbjct: 281 FLHPQNTPQRLDYLLTNFHLPKSTLIMLVAAFIGREKTLKLYHEAIENNYRFYSYGDGML 340
Query: 356 L 356
+
Sbjct: 341 I 341
>gi|298531020|ref|ZP_07018421.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfonatronospira thiodismutans ASO3-1]
gi|298509043|gb|EFI32948.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfonatronospira thiodismutans ASO3-1]
Length = 360
Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 123/363 (33%), Positives = 198/363 (54%), Gaps = 21/363 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D++L P+RIA P R +RL+++ + + ++ L +V N
Sbjct: 9 LENYDYELDPARIASWPTPDRSESRLLMLDRQGG---ELQEDRFENIDQHLEPGSLLVVN 65
Query: 63 NTKVITAQLNG-------VRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
N+KV+ A+L G V F + IS + R R S+ + GD +
Sbjct: 66 NSKVLPARLMGHKESSGSVEFLLLTPLPL-ISPAMENREKKARVECLVRASRRPRPGDWV 124
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
+F+++ + RL + G++ + + G +PLPPYI KR + +
Sbjct: 125 -YFAENVRFRLVQDLDQGRAKGDLFWTGDLGDFFVR-----YGHVPLPPYI--KRQDEPQ 176
Query: 176 DYVDYQTTYA--KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT YA QGSVAAPTAG+HFT L RL +G V L+VG GTF PVK
Sbjct: 177 DVNRYQTVYAHPDKQGSVAAPTAGMHFTPKLCHRLEDLGCMWAEVCLYVGYGTFSPVKSA 236
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
D H+MH E + + A+++ + +++G ++V+VGTT++R LE+ G + P++G++
Sbjct: 237 DIRQHVMHPEYIEVGSQAAESIRAARAQGRKVVAVGTTTVRTLESVCRMKGRVEPFTGWS 296
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+++I PG++F AVD L++NFHLPKS+LL++VSAF G + YQ+A +RF+SYGD
Sbjct: 297 DLYIYPGFKFEAVDQLITNFHLPKSSLLIMVSAFAGRRKILHSYQYAREKGFRFFSYGDA 356
Query: 354 SLL 356
+
Sbjct: 357 MFI 359
>gi|212550785|ref|YP_002309102.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Azobacteroides pseudotrichonymphae genomovar. CFP2]
gi|226736729|sp|B6YR69|QUEA_AZOPC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|212549023|dbj|BAG83691.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Azobacteroides pseudotrichonymphae genomovar. CFP2]
Length = 354
Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 125/363 (34%), Positives = 191/363 (52%), Gaps = 17/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP IAL P RD +RLMVV+ + + D+ + N D +
Sbjct: 1 MRLSKFKFHLPQELIALFPSVDRDESRLMVVYHKTGR---VEHVIFKDIIQYFNEKDTFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FN+T VI A+LNG + + + L + P W V P++ I+ G+ L+F
Sbjct: 58 FNDTSVIPARLNGNK----EKTGARVEVFLLRELDPIQRIWDVLVDPARKIRIGNKLYFE 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
++D + + A +ID + ++ F G ++ + +G +P+P Y+ RK + D
Sbjct: 114 NEDSDT-IVAEIIDNTTSRGRIIRFLYDGPYESFKKILYNLGNMPIPDYLDRK--VTKED 170
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+V AP AGLHF+ L+ RL G ++ F+T+H G G F + VED
Sbjct: 171 RERYQTIYAKNEGAVVAPAAGLHFSHELMKRLELKGCELTFITVHSGMGNFRAIDVEDLF 230
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLL---ETATTEDGIINPWSGFT 293
+ SE I+ TA +N K +I +VGT+ LR + E T G +NP++G+T
Sbjct: 231 KYKSESERIVINTETATKINQAKQNRKQICAVGTSVLRTIEDRENVVTSQGYLNPFTGWT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
N FI P Y F L++ FHLP S++L+ V+AF G + +Y+ AI YRF YGD
Sbjct: 291 NKFIFPPYNFITSTSLITGFHLPLSSMLLQVAAFGGFDLIMDVYKQAIEAKYRFGVYGDA 350
Query: 354 SLL 356
L+
Sbjct: 351 MLI 353
>gi|167765254|ref|ZP_02437367.1| hypothetical protein BACSTE_03642 [Bacteroides stercoris ATCC
43183]
gi|167696882|gb|EDS13461.1| hypothetical protein BACSTE_03642 [Bacteroides stercoris ATCC
43183]
Length = 409
Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 138/418 (33%), Positives = 212/418 (50%), Gaps = 84/418 (20%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ EF++ LP RIA P+ RD ++L++ +++ + + LP +L +N ++FN
Sbjct: 10 ISEFNYPLPDERIAKFPLPVRDQSKLLLYRHG-----EVTEDIFTSLPDYLPANSLMIFN 64
Query: 63 NTKVITAQLNGVR--------FC---------HINRREKEISCTLHMRVSPNSWSVYARP 105
NTKVI A+L+ + FC +N ++ E + L M + W A
Sbjct: 65 NTKVIQARLHFHKETGALIEVFCLEPIQPNDYALNFQQTEHAAWLCMIGNLKKWKEGALK 124
Query: 106 SKVIKKGDILHFFSQDGQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPP 164
++ KG L ++ G + +D +WN EI + + I + + G +P+PP
Sbjct: 125 REITVKGKPLTLTAERGACHGTSHWVDFRWNNPEI----TFADI-----LEVFGELPIPP 175
Query: 165 YIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
Y+ R+ D YQT Y+KI+GSVAAPTAGLHFT +L L G+ + +TLHVGA
Sbjct: 176 YLNRE--TQESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALREKGVALEELTLHVGA 233
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET------ 278
GTF PVK E+ + H MH+E ++ T L + + G+ ++VGTTS+R LE+
Sbjct: 234 GTFKPVKSEEIEGHEMHTEYISVNRST---LEKLVAHEGKAIAVGTTSVRTLESLYHIGV 290
Query: 279 -------ATTEDGIINPWSGF---------------------------------TNIFIT 298
AT ED + W + T I I
Sbjct: 291 TLLHNPNATEEDLHVKQWQPYETALETAATPAVDALQAIIAYLDRHHMETLHSSTQIIIA 350
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY +R V +++NFH P+STLL+LVSAF + +K+Y +A++H +RF SYGD+SLL
Sbjct: 351 PGYEYRIVKAMVTNFHQPQSTLLLLVSAFLH-GDWRKIYDYALAHDFRFLSYGDSSLL 407
>gi|189347014|ref|YP_001943543.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Chlorobium
limicola DSM 245]
gi|189341161|gb|ACD90564.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Chlorobium
limicola DSM 245]
Length = 346
Score = 202 bits (514), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 126/360 (35%), Positives = 197/360 (54%), Gaps = 19/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F + LP ++IA PV PRDS +LMV++ I + D+ ++ D +V
Sbjct: 1 MRLSNFRYTLPKTKIADHPVSPRDSCKLMVLNRRKKE---IEHKVFEDIVSYFKKGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV---SPNSWSVYARPSKVIKKGDILHF 117
NN++V A++ G + + + +I L +RV W V P++ ++ G+ + +
Sbjct: 58 VNNSRVFPAKIFGQK----EKTDAKIEVFL-LRVLNKEAGLWDVLVDPARKVRVGNKI-Y 111
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
F +D + A V+D + + F I++ + +G +PLPPY RK P + D
Sbjct: 112 FDED----VVAEVVDNTTSRGRTIRFLNPEIDVFSLVERIGHVPLPPYFTRK-PKET-DK 165
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
+YQT YA G+V AP AGLHFT LL ++ IG+K+ +TLH TF ++VED
Sbjct: 166 ENYQTVYASQTGAVVAPMAGLHFTMPLLQKIQKIGVKILPITLHPSLSTFNAIEVEDVSK 225
Query: 238 HIMHSEIGFIDAPTAQALNSVK-SRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I TA +N K ++ GR+++VGTT+ R+LE T DG I G+T+ F
Sbjct: 226 HKMDSEYFNIPYQTAMEINETKINKTGRVIAVGTTTCRVLEANATVDGKIKFGRGWTDKF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y+F+ D L++NF P++TLLM+VSAF + Y+ A+ Y+F +YGD +
Sbjct: 286 IYPPYQFKVTDALLTNFQQPETTLLMVVSAFAEHRLLMEAYKTAMKSDYQFLAYGDAMFI 345
>gi|148238920|ref|YP_001224307.1| S-adenosylmethionine:tRNA-ribosyltransferase-isom erase
[Synechococcus sp. WH 7803]
gi|166218751|sp|A5GJ95|QUEA_SYNPW RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|147847459|emb|CAK23010.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
[Synechococcus sp. WH 7803]
Length = 370
Score = 202 bits (514), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 139/358 (38%), Positives = 197/358 (55%), Gaps = 14/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +D++LP +RIA RPV PR +A+L++V P + L V D L S D +V
Sbjct: 7 LQLSAYDYELPEARIAQRPVEPRHAAKLLMVPPLEASSLQGRHGTVWDWQNELRSGDLLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGD--ILHFF 118
N+T+V+ A+L R + R W ARP K ++ GD L
Sbjct: 67 VNDTRVLQARLRVRRSGGGLGELLVLEPRGEGR-----WLCLARPGKKLRPGDQVWLEAL 121
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFS--ISGIELERQISLVGTIPLPPYIARKRPIDARD 176
QD L+ D + G I+ + + +E + G +PLPPYI D D
Sbjct: 122 EQDPLP-LQVLASDPASGGRIVQFPPAFVDAMAIEALLQRYGEVPLPPYITCH---DDSD 177
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YA G+VAAPTAGLH + +LL + + G+++ VTLHVG GTF PV+ ED
Sbjct: 178 QERYQTRYASRPGAVAAPTAGLHLSDDLLQAIRARGVQMSSVTLHVGLGTFRPVETEDLS 237
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-INPWSGFTNI 295
+ +HSE + +A+ + + RGGR+++VGTTS+R LE A G + P G ++
Sbjct: 238 ELSLHSEWVEVSTQLVEAVQACRQRGGRVIAVGTTSVRALEGAAAAGGGDLQPLKGPVDL 297
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
I PGY+FR VD L++NFHLPKS+LL+LVSA G E +Y AI++ YRFYSYGD
Sbjct: 298 VIQPGYQFRVVDGLLTNFHLPKSSLLLLVSALIGRERLLDLYALAIANDYRFYSYGDA 355
>gi|291514902|emb|CBK64112.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Alistipes
shahii WAL 8301]
Length = 336
Score = 202 bits (514), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 128/344 (37%), Positives = 187/344 (54%), Gaps = 12/344 (3%)
Query: 15 IALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGV 74
+A P RD +RLMV++ I + D+ + + D VFN+TKV A+L G
Sbjct: 2 LAKYPADNRDESRLMVIN---RAKGTIEHRIFKDIIEYFDEKDLFVFNDTKVFPARLYGN 58
Query: 75 RFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKW 134
+ E EI + W V P++ I+ G+ L+F D L A VID
Sbjct: 59 K--EKTGAEIEIFLLRELNRELRLWDVLVDPARKIRIGNKLYFGDDD---LLVAEVIDNT 113
Query: 135 NT-GEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVA 192
+ G L +F S E + + +G PLP ++ K ++ D YQT +A+ +G+VA
Sbjct: 114 TSRGRTLRFLFDGSYEEFKHALFALGETPLPKWVREK--VEPEDAERYQTIFAEKEGAVA 171
Query: 193 APTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTA 252
APTAG+HF+ +L+ R+ GI FVTLHVG G F V VED H M SE F++ A
Sbjct: 172 APTAGMHFSKHLMKRMEIKGIDKTFVTLHVGLGNFRTVDVEDLSKHKMDSEQFFVEEAAA 231
Query: 253 QALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSN 312
+A+N+ K + ++V++GTT +R +ETA + +G+I P G+TN FI Y F D +++N
Sbjct: 232 EAVNAAKRQERKVVAIGTTVMRTIETAVSTNGMIKPMEGWTNKFIFAPYEFTVADAMVTN 291
Query: 313 FHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
HLP ST LM+V+AF G E Y+ A YRF +YGD L+
Sbjct: 292 LHLPYSTQLMMVAAFGGYETVMNAYKVAKEEGYRFGTYGDAMLI 335
>gi|261415143|ref|YP_003248826.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|261371599|gb|ACX74344.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|302327078|gb|ADL26279.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 348
Score = 202 bits (514), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 131/362 (36%), Positives = 186/362 (51%), Gaps = 29/362 (8%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLN---SNDAIVF 61
+++F+ P IA R +A H L CP + + P ++ D +V
Sbjct: 7 DYNFEFPKELIASR------TAGKGKTHI-LYCPKNGGERRIMKAPEIVDLFRPGDCLVV 59
Query: 62 NNTKVITAQLNG-VRFCHINRREKEISCTLHMRVSPNS-----WSVYARPSKVIKKGDIL 115
NNTKVI A+L G +F ++ L ++P+ + P K + G L
Sbjct: 60 NNTKVIPARLYGETQFG------GQVEVLLVQALNPSEAGEARFEAKVHPGKAFQVGREL 113
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
G V ++ G +L F + E+E ++ G +PLPPYI RP D
Sbjct: 114 KL---AGVRTFVEEVHEE--DGNRVLRFEKTPAEMEEVMNKEGHVPLPPYI--DRPDDED 166
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT +AK G+VAAPTA LHF+ +L L + G+ V VTLHVG GTF + VED
Sbjct: 167 DKKAYQTIFAKYAGAVAAPTASLHFSEQMLEDLKAKGVYVAEVTLHVGPGTFQNISVEDF 226
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
H MH E + A +N K GGRIV+VGTTS R++ET +G + P G T
Sbjct: 227 TQHKMHGEHYELTKENADIINKAKREGGRIVTVGTTSTRVIETVADANGFLKPQKGVTYA 286
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
F PGY+++ VD L++NFH PKS+L++LVSAF G E T Y+ A+ + + +SYGD L
Sbjct: 287 FFYPGYKYKIVDGLLTNFHWPKSSLILLVSAFYGRENTLDAYKMAVENKLKLFSYGDGML 346
Query: 356 LF 357
+
Sbjct: 347 IL 348
>gi|21674139|ref|NP_662204.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Chlorobium
tepidum TLS]
gi|21647298|gb|AAM72546.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Chlorobium
tepidum TLS]
Length = 346
Score = 202 bits (514), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 124/359 (34%), Positives = 193/359 (53%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F + LP +RIA PRD+ +LMV++ I + +D+ ++ D +V
Sbjct: 1 MRLSNFRYTLPKTRIADHLESPRDACKLMVLNRRKKE---IEHKVFTDIVSYFKKGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
NN++V A++ F + + +I L ++ + W V P++ ++ G+ ++F
Sbjct: 58 VNNSRVFPAKI----FGQKEKTDAKIEVFLLRELNKEAGLWDVLVDPARKVRVGNKIYF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ + A V+D + + F I++ + + +G +PLPPY RK P + D
Sbjct: 113 ----EDDVVAEVVDNTTSRGRTIRFLNPDIDVFQMVEKIGHVPLPPYFTRK-PKET-DRT 166
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT YA G+V AP AGLHFT LL +L IG+K+ +TLH TF ++VED H
Sbjct: 167 DYQTVYASQTGAVVAPMAGLHFTIPLLQQLQKIGVKILPLTLHPSLSTFNAIEVEDVSKH 226
Query: 239 IMHSEIGFIDAPTAQALNSVK-SRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
M SE I TA +N K ++ GR+ VGTT+ R LE T DG I G+T+ FI
Sbjct: 227 KMDSEYFNIPYQTAMEINETKVNKSGRVFVVGTTTCRALEANATVDGKIKFGQGWTDKFI 286
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
P Y F+ D L++NF P++TL+M+VSAF + Y+ A+ + YRF +YGD L+
Sbjct: 287 YPPYNFKVTDALITNFQQPETTLMMVVSAFAEHRLLMEAYKTALKNNYRFLAYGDAMLI 345
>gi|313203716|ref|YP_004042373.1| s-adenosylmethionine/tRNA-ribosyltransferase isomerase
[Paludibacter propionicigenes WB4]
gi|312443032|gb|ADQ79388.1| S-adenosylmethionine/tRNA-ribosyltransferase isomerase
[Paludibacter propionicigenes WB4]
Length = 349
Score = 202 bits (513), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 125/358 (34%), Positives = 181/358 (50%), Gaps = 12/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP IA P RD +RLMVVH I D+ + N ND +
Sbjct: 1 MKLSKFKFKLPDELIAQYPSKHRDESRLMVVHRKTGE---IEHRAFKDVLEYFNENDLFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKV A+L G + + E+ + W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK--EKTGAQIEVFLLRELNHEMRLWDVLVEPARKIRIGNKLYFGED 115
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDARDYV 178
D + A VID + L F G E ++ + +G PLP I R+ ++ D
Sbjct: 116 DS---IVAEVIDNTTSRGRTLRFLFDGTHDEFKKGLYSLGETPLPRNITRE--VEPEDAD 170
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
+QT +AK +G+V+AP AG+HF+ LL R+ GI +VT H+ G F + VED H
Sbjct: 171 RFQTIFAKNEGAVSAPAAGMHFSRELLKRMEIKGIDSAYVTSHMSLGNFREIDVEDLTKH 230
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
M SE + T + +N + I +VG T +R LET +G I P+ G+TN FI
Sbjct: 231 KMDSEQMSVSVETVKKVNEAQLANRNICAVGVTVMRALETVVGTEGKIKPYDGWTNKFIF 290
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
P Y F + +++NFHLP STL+ML +AF + K Y+ A+ YRF YGD L+
Sbjct: 291 PPYDFTVANSMITNFHLPYSTLIMLTAAFGDYDLIMKAYEIAVKEEYRFGVYGDAMLI 348
>gi|110639383|ref|YP_679592.1| S-adenosylmethionine/tRNA ribosyltransferase-isomerase [Cytophaga
hutchinsonii ATCC 33406]
gi|110282064|gb|ABG60250.1| S-adenosylmethionine/tRNA ribosyltransferase-isomerase [Cytophaga
hutchinsonii ATCC 33406]
Length = 413
Score = 202 bits (513), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 139/412 (33%), Positives = 197/412 (47%), Gaps = 67/412 (16%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +++DLP RIA P+ RD ++L+V + ISD S + L N +VFN
Sbjct: 8 IETYNYDLPVERIAEYPLAERDQSKLLVYKDDH-----ISDKTFSSIVDELPRNTLLVFN 62
Query: 63 NTKVITAQL-------NGVRFCHINRREKEISCTLHMRVSPNS-WSVYARPSKVIKKGDI 114
NT+V+ A+ V + E M W + +K K+ ++
Sbjct: 63 NTRVVQARFLFQTPTGATVEIFSLEPAEGHGGPAESMSARGKVIWKCFVGNAKRWKQPEL 122
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLV---FSISGIELERQISLVGTIPLPPYIARKRP 171
+ + S L + L+ +++ I SL+G +PLPPY+ RK
Sbjct: 123 IREVQLENGSMLSFHARQIEQKADYYLIGFSWNLEDITFSEIFSLLGDLPLPPYMKRK-- 180
Query: 172 IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK 231
+A D YQT YAK +GSVAAPTAGLHFT ++ RL GI+ VTLHVGAGTF PVK
Sbjct: 181 TEASDKERYQTVYAKHEGSVAAPTAGLHFTDAIMQRLAEKGIQKQEVTLHVGAGTFKPVK 240
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET------------- 278
+ +H MHSE ++ T + L + + ++ VGTTS+R LE+
Sbjct: 241 TDSIKEHTMHSEYIHVNRATVELLKNADNL--QVTPVGTTSMRTLESLYWLGCKLCSKAA 298
Query: 279 --------------------------------ATTEDGIINPWSGFTNIFITPGYRFRAV 306
T+ D N S T + I PGY F+
Sbjct: 299 LTGKLLELTQWDAYELPALSLREAMEELLKYINTSSDK--NALSAKTALLIKPGYEFKVC 356
Query: 307 DILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
D +++NFH PKSTLL LVSAF GIE K+Y A+ + YRF SYGD+SLLF+
Sbjct: 357 DAIITNFHQPKSTLLCLVSAFIGIESMNKVYHFALENDYRFLSYGDSSLLFK 408
>gi|145219855|ref|YP_001130564.1| queuosine biosynthesis protein [Prosthecochloris vibrioformis DSM
265]
gi|145206019|gb|ABP37062.1| Queuosine biosynthesis protein [Chlorobium phaeovibrioides DSM 265]
Length = 346
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 120/360 (33%), Positives = 190/360 (52%), Gaps = 19/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F + LP +RIA PV PRDS ++MV++ + D+ ++ D ++
Sbjct: 1 MRLSNFRYTLPKTRIADHPVEPRDSCKMMVLNRRKKE---VEHKTFEDIASYFKKGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV---SPNSWSVYARPSKVIKKGDILHF 117
NN+KV A++ G + + + +I L +RV W V P++ ++ G+ ++F
Sbjct: 58 LNNSKVFPAKIFGQK----EKTDAKIEVFL-LRVLNREAGLWDVLVDPARKVRVGNKIYF 112
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+ + A V+D + + F ++ + +G +PLPPY RK D
Sbjct: 113 -----EEDVVAEVVDNTTSRGRTIRFLNPETDVFSLVDRIGNVPLPPYFTRKS--KETDK 165
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
+YQT YA G+V AP AG+HFT L+ ++ +G+K+ +TLH TF ++VED
Sbjct: 166 ENYQTVYASQTGAVVAPMAGMHFTMPLIQKIQKLGVKILPITLHPSLSTFHAIEVEDVSK 225
Query: 238 HIMHSEIGFIDAPTAQALNSVK-SRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I TA +N K + GR+++VGTT+ R+LE T DG I G+T+ F
Sbjct: 226 HKMDSEYFNIPYQTAMEINETKIKKNGRVIAVGTTTCRVLEANATVDGKIKFGQGWTDKF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y+F+ D L++NF P++TLLM+VSAF Y+ A+ YRF +YGD +
Sbjct: 286 IYPPYQFKVTDALITNFQQPETTLLMVVSAFAEHRFLMDSYKTALKSDYRFLAYGDAMFI 345
>gi|323699683|ref|ZP_08111595.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfovibrio sp. ND132]
gi|323459615|gb|EGB15480.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfovibrio desulfuricans ND132]
Length = 360
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 131/359 (36%), Positives = 192/359 (53%), Gaps = 19/359 (5%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
+D+ LP RIA P RD +RL+V+ ++ +DL +L + +V NN++
Sbjct: 12 YDYPLPEDRIAQEPAARRDGSRLLVLD---RAARSLTPARFTDLLDYLPDDCLLVANNSR 68
Query: 66 VITAQLNGVR--FCHINRREKEISCTLHMRVSPNSWSVYA----RPSKVIKKGDILHFFS 119
VI A++ G + + L +V A R SK K G + F
Sbjct: 69 VIPARVFGRKPTGGQVEFLLLTPLPLLTPEERDGWLTVRAEGLLRASKGPKPGATVTFAD 128
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ LEA +W E+ ++ + + +G +PLPPYI KRP D
Sbjct: 129 DFSLTALEAGEFGRWQV-ELRWKGDLTAL-----FNSLGHLPLPPYI--KRPDVEADRER 180
Query: 180 YQTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQTTYA GSVAAPTAGLHFT L R+ + GI+ VTL+VG GTF PV+ D D
Sbjct: 181 YQTTYADRSKTGSVAAPTAGLHFTPELRERIRAKGIQWAEVTLYVGYGTFSPVRCPDIRD 240
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+E + TA+A+ K+ G +++VGTTS R LE E G I + G T+IFI
Sbjct: 241 HRMHAEYIEVSEETAEAVRGAKAEGRPVIAVGTTSARTLEGMVREAGSIRQFRGETDIFI 300
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+PGY F+ +D +++NFHLP+S+L++++SA G + Y A+ + +RF+SYGD L+
Sbjct: 301 SPGYTFKVIDGILTNFHLPESSLIIMISALAGRKTILDAYAFALENDFRFFSYGDAMLI 359
>gi|116075044|ref|ZP_01472304.1| Queuosine biosynthesis protein [Synechococcus sp. RS9916]
gi|116067241|gb|EAU72995.1| Queuosine biosynthesis protein [Synechococcus sp. RS9916]
Length = 371
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 140/357 (39%), Positives = 194/357 (54%), Gaps = 12/357 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +D+ LP RIA PV PR +ARL++V P + + V D L + D +V
Sbjct: 7 LQLGSYDYVLPEERIAQSPVEPRHAARLLMVPPADAPLEQVRHQQVWDWQQELRAGDLLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L + E+ L R W ARP+K ++ GD +
Sbjct: 67 VNDTRVLRARLR---VRRSGGGQAEL-LVLEPR-GEGQWLCLARPAKKLRPGDQVWLEGL 121
Query: 121 DGQS-RLEATVIDKWNTGEILLVFS--ISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+ +S L+ +D+ G ++ S + +E + G +PLPPYIAR DA D
Sbjct: 122 EQESVALQVVAVDQATGGRVMQFPSGCDDAVAIEGLLQRYGEVPLPPYIARH---DADDQ 178
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YA G+VAAPTAGLH + LL L G+ + VTLHVG GTF PV+ ED
Sbjct: 179 TRYQTRYASKPGAVAAPTAGLHLSDALLDCLREKGVTIAHVTLHVGLGTFRPVETEDLTQ 238
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE-TATTEDGIINPWSGFTNIF 296
+HSE + +A+ + RGGR+++VGTTS+R LE A G + P G ++
Sbjct: 239 LTLHSEWVEVTPEVVRAVEECRQRGGRVMAVGTTSVRALEGAAQAGGGQLQPLKGSVDLV 298
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
I PGYRF V L++NFHLPKS+LL+LVSA G E +Y AI AYRFYSYGD
Sbjct: 299 IQPGYRFAVVQGLLTNFHLPKSSLLLLVSALIGRERLLALYGVAIEEAYRFYSYGDA 355
>gi|329957188|ref|ZP_08297755.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides clarus YIT 12056]
gi|328523456|gb|EGF50555.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides clarus YIT 12056]
Length = 409
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 138/418 (33%), Positives = 212/418 (50%), Gaps = 84/418 (20%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ EF++ LP RIA P+ RD ++L++ +S+ + + LP +L +N ++FN
Sbjct: 10 ISEFNYPLPDERIAKFPLPVRDQSKLLLYRHG-----EVSEDVFTSLPDYLPANSLMIFN 64
Query: 63 NTKVITAQLNGVR--------FC---------HINRREKEISCTLHMRVSPNSWSVYARP 105
NTKVI A+L+ + FC +N ++ E + L M + W
Sbjct: 65 NTKVIQARLHFHKETGALIEVFCLEPIRPNDYALNFQQTEHAAWLCMIGNLKKWKEGTLK 124
Query: 106 SKVIKKGDILHFFSQDGQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPP 164
+++ KG L ++ G + +D +WN EI + + I + + G +P+PP
Sbjct: 125 REMVVKGKPLTLTAERGACHGTSHWVDFRWNNPEI----TFADI-----LEVFGELPIPP 175
Query: 165 YIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
Y+ R+ D YQT Y+KI+GSVAAPTAGLHFT +L L G++ +TLHVGA
Sbjct: 176 YLNRE--TQESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALRGKGVEPEELTLHVGA 233
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET------ 278
GTF PVK E+ + H MH+E ++ T L + + G+ ++VGTTS+R LE+
Sbjct: 234 GTFKPVKSEEIEGHEMHTEYISVNRST---LEKLVAHEGKAIAVGTTSVRTLESLYHIGV 290
Query: 279 -------ATTEDGIINPWSGF---------------------------------TNIFIT 298
AT ED + W + T I I
Sbjct: 291 TLLNNPDATEEDLHVKQWQPYEMTPETAATPAVDALRAIIAYLDRHHMETLHTSTQIIIA 350
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY +R V +++NFH P+STLL+LVSAF + +K+Y +A++H +RF SYGD+SLL
Sbjct: 351 PGYEYRIVKAMVTNFHQPQSTLLLLVSAFLH-GDWRKIYDYALAHDFRFLSYGDSSLL 407
>gi|307718815|ref|YP_003874347.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Spirochaeta thermophila DSM 6192]
gi|306532540|gb|ADN02074.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Spirochaeta thermophila DSM 6192]
Length = 351
Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 135/356 (37%), Positives = 188/356 (52%), Gaps = 20/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +K+F FDLP IA P R+ ARLMVVH I V +LP L + +V
Sbjct: 15 MKLKDFYFDLPEELIAQHPAQRREDARLMVVHRETGR---IEHAHVRELPWILPPS-CLV 70
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+V ++L R ++ L V P+ W ++ + G + +
Sbjct: 71 FNDTRVRKSRLLATR----RDSGGKVEILLLEEVEPSLWKAVVSRARRQRPGVV---YEL 123
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G E ++ E L + IS E + G +PLPPYI KR D Y
Sbjct: 124 PGGREAEIVGME-----EGLRLVRISPPIDEVYLDRHGHVPLPPYI--KRSDLPEDEERY 176
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ GS AAPTAGLHFT L+ L S V F+TLHVG GTF PV+ E+ ++H M
Sbjct: 177 QTVFARHPGSAAAPTAGLHFTPALMDELKSRHT-VTFLTLHVGLGTFQPVRTENVEEHRM 235
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E +I TA+ + KS+ + +VGTT+ R LE+A + W T+++I PG
Sbjct: 236 HKERFYIPEETARVIEGAKSQHIPVCAVGTTTTRALESAWEHGRLKRGWQE-TSLYIYPG 294
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y FR +D L +NFH P S+L++LVSAF G + + Y+ AI H YRF+SYGD L+
Sbjct: 295 YTFRVIDRLFTNFHTPGSSLVLLVSAFLGKDLLLEAYRKAIEHRYRFFSYGDAMLI 350
>gi|189219693|ref|YP_001940334.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Methylacidiphilum infernorum V4]
gi|189186551|gb|ACD83736.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Methylacidiphilum infernorum V4]
Length = 337
Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 129/363 (35%), Positives = 187/363 (51%), Gaps = 37/363 (10%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ + FDLP IAL P+ RD +LMVV H +L FL+ D +V
Sbjct: 3 FIDHYSFDLPSELIALDPLPSRDGCKLMVVDRKTQ---RFYHHRFYELALFLSKEDLLVL 59
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF--S 119
NN+KVI A +++ + + P W V A P K +K G I+ +
Sbjct: 60 NNSKVIPAFFQSA--------DEKTTFLFVQSLDPLHWKVMASPGKHLKMGSIIPIKCPT 111
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRP------ID 173
Q+ S + A + K + +L F + E ++ +G PLPPYI + R I+
Sbjct: 112 QNPNSPITARLSSKLQSAYYVLEF-----DEEPKLEWLGLPPLPPYIRKLRKKKNRVEIE 166
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
+D YQT +A+ GS+AAPTAGLHF+ +L + + F+TLHVG GTF P+ E
Sbjct: 167 QKDREYYQTVFAQHPGSIAAPTAGLHFSKEMLEQFSTA-----FITLHVGPGTFRPLSTE 221
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
+ +E ID+ +L G RIV+VGTT +R+LET + P G+T
Sbjct: 222 QLATGRLEAEYYSIDS----SLKEKYKPGRRIVAVGTTVVRVLETIKN----LEPQQGWT 273
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
++FI P + F+ + L++NFHLP+S+L +L AF G E KK Y AI +YRFYSYGD
Sbjct: 274 DLFIFPPFTFKRTNALITNFHLPRSSLFLLTCAFAGTELLKKAYAEAIQKSYRFYSYGDA 333
Query: 354 SLL 356
L+
Sbjct: 334 MLI 336
>gi|152990890|ref|YP_001356612.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Nitratiruptor sp. SB155-2]
gi|166216732|sp|A6Q446|QUEA_NITSB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|151422751|dbj|BAF70255.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Nitratiruptor sp. SB155-2]
Length = 340
Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 137/362 (37%), Positives = 195/362 (53%), Gaps = 31/362 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ V +D+ LPP IA PV P D A+L++ I+ + +LP FL IV
Sbjct: 5 LKVDSYDYHLPPHLIAKEPVQPADRAKLLIYDRKTDT---ITHTIFKNLPQFLPQKTHIV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI A++ F H + K I ++ + ++V+ R +K G LHF SQ
Sbjct: 62 FNDTKVIKARI----FGHKSSGGK-IELLINRPLENERFNVFIRGK--VKVGTTLHF-SQ 113
Query: 121 DGQSRLEATVIDKWNTGEILLVF-----SISGIELERQISLVGTIPLPPYIARKRPIDAR 175
Q+ +E + D G ++ F +S EL + +G+IPLPPYI R
Sbjct: 114 GLQAIVEELIED----GTRIVTFYHDEKRLSFHELLPILDTIGSIPLPPYI--DRAAKKE 167
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D +YQ +AK G+VAAPTA LHFT +L+ + +FVTLHVGAGTF PV+
Sbjct: 168 DETNYQPIFAKKAGAVAAPTASLHFTEQMLNSMAK-EFPFHFVTLHVGAGTFKPVEANLI 226
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+H MHSE I T + + S ++++VGTT R +E G ++
Sbjct: 227 TEHAMHSEYYEIPKDTIEVIES----DEKVLAVGTTVTRTIEYYVRTKKSF----GECDL 278
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
F+ P + VD L++NFHLPKSTL+MLV++F G+E TK++YQ AI YRFYSYGD L
Sbjct: 279 FLNPLNPPKRVDHLLTNFHLPKSTLIMLVASFIGLETTKRVYQEAIEKEYRFYSYGDAML 338
Query: 356 LF 357
+
Sbjct: 339 IL 340
>gi|88809266|ref|ZP_01124775.1| Queuosine biosynthesis protein [Synechococcus sp. WH 7805]
gi|88787208|gb|EAR18366.1| Queuosine biosynthesis protein [Synechococcus sp. WH 7805]
Length = 374
Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 138/364 (37%), Positives = 191/364 (52%), Gaps = 14/364 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+++ +D+ LP IA RPV PR +ARL++V + V D + L D +V
Sbjct: 7 LLLSAYDYQLPAECIAQRPVEPRHAARLLMVPALEESSSQVRHATVWDWQSELQPGDLLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGD--ILHFF 118
N+T+V+ A+L R + R W ARP+K ++ GD L
Sbjct: 67 VNDTRVLQARLRVRRSGGGLGELLVLEPRGEGR-----WLCLARPAKKLRPGDQVWLEAL 121
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSI--SGIELERQISLVGTIPLPPYIARKRPIDARD 176
QD L+ D + G I+ I +E + G +PLPPYI R D D
Sbjct: 122 EQDSLP-LQVLASDSASGGRIVQFPPTYNDAIAIEALLQRYGEVPLPPYITRH---DDSD 177
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YA G+VAAPTAGLH + +LL + + G+ + VTLHVG GTF PV+ ED
Sbjct: 178 QERYQTRYASRPGAVAAPTAGLHLSDDLLQAIRARGVTIASVTLHVGLGTFRPVETEDLR 237
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE-TATTEDGIINPWSGFTNI 295
D +HSE + + A+ + RGGR+++VGTTS+R LE A G + P G ++
Sbjct: 238 DLSLHSEWVEVSSELVAAVEACHRRGGRVIAVGTTSVRALEGAAQAGGGKLQPLKGPVDL 297
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
I PGYRF V L++NFHLPKS+LL+LVSA G E +Y A+ + YRFYSYGD
Sbjct: 298 VIQPGYRFSVVQGLLTNFHLPKSSLLLLVSALIGRERLLSLYAQAVENHYRFYSYGDAMW 357
Query: 356 LFQK 359
+ K
Sbjct: 358 IAPK 361
>gi|256827668|ref|YP_003151627.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Cryptobacterium curtum DSM 15641]
gi|256583811|gb|ACU94945.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Cryptobacterium curtum DSM 15641]
Length = 358
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 125/360 (34%), Positives = 183/360 (50%), Gaps = 15/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+DLP RIA P RD +++V+ + D + D+ ++N D +V
Sbjct: 1 MKTSDFDYDLPEERIAQEPAPIRDKCKMLVMD---RITGALEDKIFCDIIDYINPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTL---HMRVSPNSWSVYARPSKVIKKGDILHF 117
N T+V+ A+L G + E + L + + W V RP K +K G I+ F
Sbjct: 58 ANETRVLPARLLGAKRTTGGAAEVFLLRPLPHGQQNNTQSDWEVLVRPGKRLKPGAIIDF 117
Query: 118 FSQDGQSRLEATVID--KWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDA 174
S +G + L A ++ + GE + S L+ + VG PLPPYI +
Sbjct: 118 PSTNGSTALTAEIVGFVESGKGERIARLSTEAYSTLDEALHAVGHTPLPPYIKQY----V 173
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D YQT Y+ + S AAPTAGLHFT L+ + + G + V L VG TF V +D
Sbjct: 174 GDEEMYQTVYSNRETSAAAPTAGLHFTPELIEAIKAKGARWETVELQVGIDTFRIVDEDD 233
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGF 292
+H MH+E + A N RGGR+++VGTTS R LE+A ++
Sbjct: 234 PRNHAMHTETYTVPQRVVDACNEAHQRGGRVIAVGTTSTRSLESAWDVETHQLVARDQAQ 293
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T +F+ PG F +D L++NFH+P+STL+MLVSAF + Y+HAI + YR S+GD
Sbjct: 294 TALFLLPGSNFHVIDALITNFHVPRSTLMMLVSAFSSRDAIMAAYRHAIDNKYRMLSFGD 353
>gi|34541200|ref|NP_905679.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas gingivalis W83]
gi|34397516|gb|AAQ66578.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas gingivalis W83]
Length = 350
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 124/358 (34%), Positives = 182/358 (50%), Gaps = 12/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP IAL P RD +R+MVVH I + D+ + + D V
Sbjct: 1 MKLSKFKFNLPEELIALEPTKFRDESRMMVVHRRTG---EIEHRVFKDILEYFDKGDTFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+V A+L G + + E+ + W V P++ I+ G+ L+F +
Sbjct: 58 FNNTRVFPARLYGNK--EKTGAQIEVFLLRELNERLKLWDVLVDPARKIRIGNKLYFGND 115
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ L A VID + L F G E + + +G PLP YI R ++ D
Sbjct: 116 E---ELVAEVIDNTTSRGRTLRFLYDGSHDEFKELLFQLGQTPLPKYI--DRDVNKEDPE 170
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQ+ +AK++G+V AP A LHF+ L+ RL ++T+H G + + VED H
Sbjct: 171 RYQSIFAKVEGAVVAPAASLHFSRELMKRLEIKDCHFSYITVHHALGAYRDIDVEDLTKH 230
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
M SE +I + +N +I +VGT+ LR LETA + DG + P+ G+TN FI
Sbjct: 231 KMDSEEMYITEESCININRSWDEEKKICAVGTSILRALETAVSTDGHLKPFEGWTNRFIF 290
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
P Y F L++NFH+P STLLM+ +AF G E Y A+ YRF +YGD L+
Sbjct: 291 PPYEFHLPSALVTNFHMPLSTLLMMTAAFGGHELIMSAYDLAVKEKYRFGAYGDAMLI 348
>gi|239994274|ref|ZP_04714798.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Alteromonas
macleodii ATCC 27126]
Length = 227
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/205 (47%), Positives = 135/205 (65%), Gaps = 8/205 (3%)
Query: 158 GTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYF 217
G +PLPPYI RP ++ D YQT Y + G+VAAPTAGLHF +L+ L G+ + F
Sbjct: 22 GHMPLPPYI--DRPDESSDKERYQTVYNQKPGAVAAPTAGLHFDDAILAALKEKGVNLAF 79
Query: 218 VTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE 277
VTLHVGAGTF PV+V++ +H MH+E + A+ + K+ G R+++VGTTS+R LE
Sbjct: 80 VTLHVGAGTFQPVRVDNIQEHKMHAEFAEVPQDVVDAVLTTKANGKRVIAVGTTSVRSLE 139
Query: 278 TATT------EDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIE 331
+A ++ +I P++ T IFI PG+ F+ VD + +NFHLP+STL+ML+SAF G E
Sbjct: 140 SAAKASAERGDEEVIAPFNEDTEIFIYPGFEFKVVDAMFTNFHLPESTLMMLISAFAGKE 199
Query: 332 ETKKMYQHAISHAYRFYSYGDTSLL 356
K YQ AI YRF+SYGD+ +
Sbjct: 200 NVMKAYQEAIEKEYRFFSYGDSMFI 224
>gi|254672411|emb|CBA05734.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis alpha275]
Length = 312
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 127/313 (40%), Positives = 177/313 (56%), Gaps = 18/313 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P++ + D + DLP ++ + D +V
Sbjct: 11 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPDMP----LQDRVFGDLPDYVEAGDVLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 67 FNNTKVMKARLFGQKDSG-----GRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 119 --EGGIRAVMVGR--EGELFCLRFEGGETVYELLEQNGHLPLPPYI--ERAADADDDSRY 172
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 173 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 232
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + TA A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 233 HSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 292
Query: 301 YRFRAVDILMSNF 313
YRF VD L++NF
Sbjct: 293 YRFNVVDRLVTNF 305
>gi|34540718|ref|NP_905197.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas gingivalis W83]
gi|34397032|gb|AAQ66096.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase, putative
[Porphyromonas gingivalis W83]
Length = 405
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 145/408 (35%), Positives = 192/408 (47%), Gaps = 65/408 (15%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+ LP RIA + RD+ +L+V I D + S L L S +V N
Sbjct: 9 IADYDYPLPEERIAKHALPQRDACKLLVYDKG-----EIKDAVFSQLSEVLPSGSMLVRN 63
Query: 63 NTKVITAQL-----NGVR---FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NT+VI A+L G FC + +L R S +W +K + D+
Sbjct: 64 NTRVIRARLLFRKSTGATIEVFCLEPVSPAQYELSLTARGS-CTWHCMVGNAKRWRSDDL 122
Query: 115 -LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
+ S G S L D G I L + + + G +P+PPY+ R +
Sbjct: 123 QMEIPSPQGGSILLTASHDPAADGCIRLSWENDHYTFGEILEMAGILPIPPYL--NRDTE 180
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT YAK GSVAAPTAGLHFT RL + G V VTLHVGAGTF PVK E
Sbjct: 181 EEDLETYQTVYAKNLGSVAAPTAGLHFTEEEFERLRAQGTPVVDVTLHVGAGTFRPVKSE 240
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-------------AT 280
+H MH E+ I+ + +AL + G IV+VGTTS+R LE+ +
Sbjct: 241 TIGEHRMHRELIVIERSSLEALRDWQ---GSIVAVGTTSVRTLESLYWLGRSLSSASHTS 297
Query: 281 TEDGIINPWSGFTN-------------------------------IFITPGYRFRAVDIL 309
E +N W + N I I PGYR+R VD +
Sbjct: 298 QESLKVNQWEAYENEDVALSRSETIRIILDWMDEQGVETLIFPTEILIAPGYRYRMVDAM 357
Query: 310 MSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
++NFH P+STLL+LVSAF G E K +Y HA+ YRF SYGD SLL
Sbjct: 358 ITNFHQPRSTLLLLVSAFIG-ENWKAVYHHALESGYRFLSYGDGSLLI 404
>gi|258648186|ref|ZP_05735655.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
tannerae ATCC 51259]
gi|260852070|gb|EEX71939.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
tannerae ATCC 51259]
Length = 349
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 125/362 (34%), Positives = 185/362 (51%), Gaps = 20/362 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F+F LP +IA P RD R+MV+ I +L + + D V
Sbjct: 1 MKLSQFNFKLPAEKIAKYPSPLRDDCRMMVLDKTTG---KIEHRKFDELLDYFDEKDLFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRRE----KEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
FN+TKV A+L G + R E +E++ L + W V P++ I+ G+ L
Sbjct: 58 FNDTKVFPARLYGNKEKTGARIEVFLLRELNQELRL------WDVLVDPARKIRIGNKL- 110
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDA 174
+F +D + + A VID + L F G E +R + +G P+P I RP +
Sbjct: 111 YFGED--NSIVAEVIDNTTSRGRTLRFLYDGDHEEFKRSLYALGEAPIPREI--NRPTEP 166
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D +QT +A+ +G+V AP AGLHF+ ++ ++ GI ++TLH G G + VED
Sbjct: 167 EDLERFQTIFARNEGAVTAPGAGLHFSKVMMKKMELKGIDAAYLTLHCGLGNYRTTDVED 226
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
H M SE F+DA + +NS + +I++VG+T +R LE DG I + G+TN
Sbjct: 227 LTKHKMESEQMFVDAKCCRHVNSAQDANRKILAVGSTVMRALEVCVGPDGHIKEFEGWTN 286
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
FI P Y F D ++ NF P STLLML SAF G ++ Y+ AI Y F YGD
Sbjct: 287 KFIFPPYEFSVADAMLVNFQFPYSTLLMLASAFGGYDQVMGAYKEAIKGEYMFGPYGDAM 346
Query: 355 LL 356
L+
Sbjct: 347 LI 348
>gi|258404231|ref|YP_003196973.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Desulfohalobium retbaense DSM 5692]
gi|257796458|gb|ACV67395.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Desulfohalobium retbaense DSM 5692]
Length = 363
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 129/361 (35%), Positives = 192/361 (53%), Gaps = 21/361 (5%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
+ F+LP +IA P RD++RL+++ + + DL L +V N ++
Sbjct: 13 YQFELPADQIAQHPHPQRDASRLLILDRSSGQRQHAT---FRDLVDTLPDGALLVANTSR 69
Query: 66 VITAQLNG--------VRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
V+ A+L G V F + L + S R SK + G F
Sbjct: 70 VLPARLKGQKRATGGKVEFLLLTPLPLVTPQPLADGRNEGFVSGLLRSSKPLAVGQKADF 129
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+E TVI++ G + + SG ++ G +PLPPYI R+ DA D+
Sbjct: 130 -----PGGIELTVIEREEFGRVQVRLCWSG-DMAEVFQAYGHMPLPPYIQRED--DATDH 181
Query: 178 VDYQTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
YQT YA GSVAAPTAGLHFT ++L L GI+ VTL+VG GTF P++ D
Sbjct: 182 GRYQTVYADSAKTGSVAAPTAGLHFTDDVLHALRDKGIQWAEVTLYVGYGTFSPLRCRDI 241
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+H MH E +DA A+ ++ ++ G +V+VGTT++R LE+ G I P++G+T+I
Sbjct: 242 REHHMHPEYIELDAANAETISRAQAEGRPVVAVGTTTVRTLESIAHHCGRIQPFAGWTDI 301
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PG+ FR VD L++NFHLP S+L+++V+AF G + Y+ A+ YRF+SYGD
Sbjct: 302 FIYPGFSFRVVDHLLTNFHLPGSSLILMVAAFAGRRLVLEAYEEAVDEGYRFFSYGDAMF 361
Query: 356 L 356
+
Sbjct: 362 I 362
>gi|42523695|ref|NP_969075.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bdellovibrio bacteriovorus HD100]
gi|39575902|emb|CAE80068.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bdellovibrio bacteriovorus HD100]
Length = 346
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 134/367 (36%), Positives = 187/367 (50%), Gaps = 45/367 (12%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + + DF P IA PV P +R+M V L + L+S +PA D +V
Sbjct: 1 MKLTDLDFSYPEELIATSPVRP---SRVMWVEGELEPQEISLQDLLSRIPA----GDVLV 53
Query: 61 FNNTKVITAQLNGVRFCHINRR--EKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
NNT+V+ RR ++ +++ W V PSK K G +L
Sbjct: 54 VNNTRVL------------KRRVFSGDVEILFLKQINATDWEVLF-PSKKFKIGSVLEL- 99
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
++ T+ K + L +S E V +PLPPYI + R + R V
Sbjct: 100 ----PLGVQMTLQQKGRPQTVRLSQEVS----EDYFQKVAELPLPPYIQKAR--EQRHTV 149
Query: 179 D-----YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT + K GS AAPTA LHF++ + L S G+KV VTLHVG GTF+PV E
Sbjct: 150 DADESWYQTAWNKNPGSFAAPTASLHFSAEDIEGLKSRGVKVLEVTLHVGLGTFLPVTAE 209
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINP----- 288
D +DH MH E I A T A+ K+ G +I S+GTT+ R LE+A G++
Sbjct: 210 DLNDHDMHEEYVEISAATWSAVQKAKAEGRKIWSLGTTTSRSLESAA--QGLLGAMSETG 267
Query: 289 WSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
+SGFT + I PGY+++ VD LM+NFH P+STL+ LV+ F + K YQ AI +R +
Sbjct: 268 FSGFTKLLIQPGYQYKVVDCLMTNFHQPQSTLVALVAGFSSLNRVKACYQWAIERKFRLF 327
Query: 349 SYGDTSL 355
SYGD ++
Sbjct: 328 SYGDLTV 334
>gi|226736734|sp|A8Z6M6|QUEA_CAMC1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|158604995|gb|ABW74807.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter concisus 13826]
Length = 340
Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 127/361 (35%), Positives = 199/361 (55%), Gaps = 35/361 (9%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +D+ LP IA PV P++ ARL+V L I + DL + + + A++FN
Sbjct: 7 ISSYDYFLPEMLIAKEPVLPKEEARLLVY---LKKTKEIKHYKFKDLASLIPDDAAVIFN 63
Query: 63 NTKVITAQLNGVRFCHINRREKEISCT--LHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NTKVI A++ G ++ +C L+ + N +SVY R + G +L+F
Sbjct: 64 NTKVIKARILG-------HKQSGGACEVMLNQPLGDNKFSVYVRGR--VSVGSVLNF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGI-----ELERQISLVGTIPLPPYIARKRPIDAR 175
++ V++ + G ++ F+ +G+ +L ++ +G +PLPPYI R D
Sbjct: 112 --ADDIKVNVLELNDDGSRVVNFTKNGVILDTAQLFSELEKIGHVPLPPYIKRADTKDDE 169
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
+ YQ+ +AK G+VAAPTA LHF+ +L R I + ++TLHVGAGTF V+ ++
Sbjct: 170 SW--YQSIFAKNSGAVAAPTASLHFSEQMLER-IKAKHDIAYITLHVGAGTFKGVECQNI 226
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+DH MHSE + + ++S K I+ VGTT R +E E SGF +
Sbjct: 227 NDHKMHSEFYELSEKAQEIISSNKP----ILGVGTTVTRCVE----EFARSKQSSGFCKL 278
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
F+ + + L++NFHLPKSTL+MLV++F G+EET ++Y+ A+S YRFYSYGD L
Sbjct: 279 FLNLNNKPIRQNYLLTNFHLPKSTLIMLVTSFIGLEETMRIYETAVSEKYRFYSYGDGML 338
Query: 356 L 356
+
Sbjct: 339 V 339
>gi|188994433|ref|YP_001928685.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas gingivalis ATCC 33277]
gi|188594113|dbj|BAG33088.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas gingivalis ATCC 33277]
Length = 350
Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 123/358 (34%), Positives = 182/358 (50%), Gaps = 12/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP IAL P RD +R+MVVH I + D+ + + D V
Sbjct: 1 MKLSKFKFNLPEELIALEPTKFRDESRMMVVHRRTG---EIEHRVFKDILEYFDKGDTFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+V A+L G + + E+ + W V P++ I+ G+ L+F +
Sbjct: 58 FNNTRVFPARLYGNK--EKTGAQIEVFLLRELNERLKLWDVLVDPARKIRIGNKLYFGND 115
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ L A VID + L F G E + + +G PLP YI R ++ D
Sbjct: 116 E---ELVAEVIDNTTSRGRTLRFLYDGSHDEFKELLFQLGQTPLPKYI--DRDVNKEDPE 170
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQ+ +A+++G+V AP A LHF+ L+ RL ++T+H G + + VED H
Sbjct: 171 RYQSIFAEVEGAVVAPAASLHFSRELMKRLEIKDCHFSYITVHHALGAYRDIDVEDLTKH 230
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
M SE +I + +N +I +VGT+ LR LETA + DG + P+ G+TN FI
Sbjct: 231 KMDSEEMYITEESCININRSWDEEKKICAVGTSILRALETAVSTDGHLKPFEGWTNRFIF 290
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
P Y F L++NFH+P STLLM+ +AF G E Y A+ YRF +YGD L+
Sbjct: 291 PPYEFHLPSALVTNFHMPLSTLLMMTAAFGGHELIMNTYDLAVKEKYRFGAYGDAMLI 348
>gi|154175322|ref|YP_001408005.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter curvus 525.92]
gi|112803352|gb|EAU00696.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter curvus 525.92]
Length = 343
Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 134/362 (37%), Positives = 199/362 (54%), Gaps = 35/362 (9%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHL-VSDLPAFLNSNDAIVF 61
+ +D+DLP IA PV P++ ARL+V +HL DL + + A+VF
Sbjct: 10 ISSYDYDLPKELIANEPVLPKEQARLLVYFRQTGN----IEHLKFKDLCELIPGDTAVVF 65
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKVI A++ G + R L+ + +S Y + + G IL F D
Sbjct: 66 NDTKVIKARILGHK-----RSGGACEVMLNQPLGDAKFSCYVKGR--VSAGKILEF--AD 116
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELE-----RQISLVGTIPLPPYIARKRPIDARD 176
G S A +++ + G ++ FS +G+ L+ +++ +G IPLPPYI KR D
Sbjct: 117 GVS---AEILELNSDGTRIVEFSKNGVSLDTAMLFKELEKIGHIPLPPYI--KRADTKED 171
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQ+ +A G+VAAPTA LHF+ ++L R+ + Y +TLHVGAGTF V+ ED
Sbjct: 172 ESWYQSVFAAHSGAVAAPTASLHFSEDMLKRIKAKHESAY-LTLHVGAGTFKGVECEDIR 230
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNI 295
H+MHSE I T + +NS K +I+ VGTT R +E A +++ SGF +
Sbjct: 231 SHVMHSEFYEIPQDTQELINSDK----KILGVGTTVTRCVEEFARSKNA-----SGFCKL 281
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
F+ + L++NFHLPKSTL+MLV++F G++ET ++Y+ AI YRFYSYGD L
Sbjct: 282 FLNLNNPPIRQNYLLTNFHLPKSTLIMLVTSFIGLDETMRIYKAAIEEKYRFYSYGDGML 341
Query: 356 LF 357
+
Sbjct: 342 VL 343
>gi|312129239|ref|YP_003996579.1| s-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Leadbetterella byssophila DSM 17132]
gi|311905785|gb|ADQ16226.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Leadbetterella byssophila DSM 17132]
Length = 350
Score = 199 bits (507), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 124/359 (34%), Positives = 188/359 (52%), Gaps = 13/359 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F FDLP S IA P RD AR+MV+H I D+ + D +V
Sbjct: 1 MKLSSFKFDLPDSLIAQHPYEDRDGARMMVLHRKTGK---IEHKQFRDIIEYFGDGDVMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV A+L G + + E+ + W V P++ I+ G+ L+F
Sbjct: 58 ANDTKVFPARLYGSK--EKTGAKIEVFLLRELNREMRLWDVLVDPARKIRVGNKLYF--- 112
Query: 121 DGQSRLEATVIDKWNTG--EILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
G S L A VID + I +F + E+ + I +G P+P I ++ D D
Sbjct: 113 -GDSDLVAEVIDNTTSRGRTIRFLFDGNHEEMMQAIYELGETPIPKDILQREVADY-DEE 170
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
+QT +AK +G+VAAP AG+HFT N++ R+ G+ +TLH+G GTF V+VED H
Sbjct: 171 RFQTIFAKNEGAVAAPIAGIHFTKNIVRRMEINGVDFAPLTLHIGIGTFRQVEVEDLTKH 230
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPW-SGFTNIFI 297
SE FI T +N R+ ++G+TSLR +E++ + + + P + +T+ FI
Sbjct: 231 KTDSENFFIPEATCNIVNRALDENKRVCAIGSTSLRAMESSVSANNRLKPLDNAWTDKFI 290
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
P + F+ + L++NFHLP+S LLM AF G + + YQ AI Y+F++YGD L+
Sbjct: 291 FPPFDFKIANALLTNFHLPESILLMTTCAFGGYDTVMEAYQVAIKEKYKFFTYGDAMLI 349
>gi|149921269|ref|ZP_01909725.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Plesiocystis pacifica SIR-1]
gi|149817929|gb|EDM77391.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Plesiocystis pacifica SIR-1]
Length = 365
Score = 199 bits (506), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 138/367 (37%), Positives = 198/367 (53%), Gaps = 26/367 (7%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNS-------N 56
++DF+LP +IA P R +AR+ V+ +S H V L A L+
Sbjct: 6 DYDFELPTEQIAQAPASERSAARMFVLA---EAGAAVSTHSRVGALEAVLDGVAEARGQR 62
Query: 57 DAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSW-SVYARPSKVIKKGDIL 115
IV N+++V+ A+++ R E+ + P + +AR ++ +++G++L
Sbjct: 63 PLIVVNDSRVVPARIHVFRATGGR---VELLVVDPAALGPGARVRAWARGARRLREGEVL 119
Query: 116 HFFSQDGQSRL-EATVIDKWNTGEIL----LVFSISGIELERQISLVGTIPLPPYIARKR 170
G++ L E + GE VF I +L + VG +PLPPYIAR
Sbjct: 120 RLPGAHGETALLELRYLGAEGEGEAADSRARVFEIVRGQLLDALEAVGELPLPPYIARPE 179
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
DA D YQT YA+ +GSVAAPTAGLHF + +L RL +V +TLHVG GTF+P+
Sbjct: 180 GPDAADRERYQTLYARHRGSVAAPTAGLHFDAAMLERL-----EVAPITLHVGPGTFLPM 234
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPW 289
ED H + SE I +A + + ++ G I++VGTT+ R LE+ A G I P
Sbjct: 235 DTEDVRAHRVGSERYSISEASAARIEAARAEGRPILAVGTTATRTLESVALANGGAIVPG 294
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
SG T + ITPGYRF VD+L++NFHLP+S+LLMLV G E Y A++ YRFYS
Sbjct: 295 SGRTELVITPGYRFSVVDLLLTNFHLPRSSLLMLVCCLGGRERVLAAYAEAVAAGYRFYS 354
Query: 350 YGDTSLL 356
YGD L+
Sbjct: 355 YGDCMLV 361
>gi|187735219|ref|YP_001877331.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Akkermansia
muciniphila ATCC BAA-835]
gi|187425271|gb|ACD04550.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Akkermansia
muciniphila ATCC BAA-835]
Length = 329
Score = 199 bits (506), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 132/354 (37%), Positives = 190/354 (53%), Gaps = 34/354 (9%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+FD+ LP IA RP+ R ++R+MV+H + +I DLP ++ D + N+T
Sbjct: 9 DFDYPLPEELIADRPLPDRSASRMMVIHRDTG---MIEHRHFCDLPEYVREGDHFILNDT 65
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQS 124
+V+ A+ + I ++P W RP + +K G + G++
Sbjct: 66 RVVPARYFS--------NDGSIEIVRAEVLNPLLWKCMVRPGRKMKLGRTVAV----GEA 113
Query: 125 RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTY 184
ID+ G L+ F + E G + LP Y+ R+ D D YQT Y
Sbjct: 114 VGTVEGIDE--EGYRLIRF-----DREVDEEKYGRLALPHYMNRES--DPSDRERYQTVY 164
Query: 185 AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEI 244
A+ +G++AAPTAGLHFT LL+ + F+TLHVG GTF PVK + +DH MH+E
Sbjct: 165 ARHEGAIAAPTAGLHFTPELLA-----SVPHDFLTLHVGVGTFRPVKADRIEDHQMHTEH 219
Query: 245 GFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-INPWSGFTNIFITPGYRF 303
F+ +A + R+++VGTTS+R+LE T +G+ + SG TNIFI P Y +
Sbjct: 220 FFL----PEAAARAVNNARRVIAVGTTSVRVLEHVATAEGLPLRECSGSTNIFIYPPYNY 275
Query: 304 RAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ VD L++NFHLP+STLLMLVSAF G E K Y AI YRF+SYGD L+
Sbjct: 276 KVVDALITNFHLPQSTLLMLVSAFAGRELVMKAYLEAIRERYRFFSYGDCMLIL 329
>gi|154149256|ref|YP_001406649.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter hominis ATCC BAA-381]
gi|153805265|gb|ABS52272.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter hominis ATCC BAA-381]
Length = 340
Score = 199 bits (506), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 137/361 (37%), Positives = 202/361 (55%), Gaps = 32/361 (8%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+V+ +D++LP IA PV P+++ARL+V + IS DL L + AI+F
Sbjct: 7 LVESYDYELPRELIANAPVMPKEAARLLVYN---RANGEISHLHFGDLAEIL-PDCAIIF 62
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKVI A++ F H + K I L+ + +SVY R S +K G IL F
Sbjct: 63 NDTKVIKARI----FGHKDSGGK-IELLLNSPLGEGKFSVYVRGS--VKIGAILEF---- 111
Query: 122 GQSRLEATVIDKWNTGEILLVFS-----ISGIELERQISLVGTIPLPPYIARKRPIDARD 176
L+A +++ ++ G + FS + EL + + +G +PLPPYI R D
Sbjct: 112 -DKNLKAEILELFDDGLRVARFSQNSHILETHELFKILDEIGHVPLPPYIKRADTKDDES 170
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+ YQT +AK +G+VAAPTA LHF+ +L+ L + +Y++TLHVGAGTF PV+V +
Sbjct: 171 W--YQTIFAKNEGAVAAPTASLHFSDEMLADLKAKH-DIYYLTLHVGAGTFKPVEVANIK 227
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
DH MH E I TA+ L+S + I+ VGTT R +E I G +F
Sbjct: 228 DHKMHGEYYSIPERTAKLLDSER----EILGVGTTCTRTIEFYARTHKI----GGICELF 279
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ P + L++NFHLPKSTL+MLV++F G+E+T ++Y+ A+ YRFYSYGD L+
Sbjct: 280 LHPNNPPIRQNHLLTNFHLPKSTLIMLVASFIGLEKTLELYKIAVEKKYRFYSYGDGMLI 339
Query: 357 F 357
Sbjct: 340 L 340
>gi|318042183|ref|ZP_07974139.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus sp. CB0101]
Length = 372
Score = 199 bits (505), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 139/356 (39%), Positives = 198/356 (55%), Gaps = 22/356 (6%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
+ FDLP + IA PV PR +ARL+VV P P DL L D +V NNT+
Sbjct: 13 YVFDLPETFIAQSPVEPRHAARLLVVDPGQ--PSGCRHRTAWDLQDELKPGDLLVVNNTR 70
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSP---NSWSVYARPSKVIKKGDILHFFSQDG 122
V+ A+L RR S L + + P + W ARP+K +K G++L G
Sbjct: 71 VLKARLQA-------RRPSGGSVEL-LVLEPAGESDWLCLARPAKRLKPGELLQL-EHHG 121
Query: 123 QSR--LEATVIDKWNTGEILLV--FSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
Q LE ID+ G ++ S +E ++ G++PLPPYI ++ + D
Sbjct: 122 QPAIGLEIVAIDEETGGRVVRFPEECTSPEAIETLLARYGSMPLPPYIQQQ---NDDDDT 178
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YA G+VAAPTAGLH + L++ + + G+++ VTLHVG GTF PV+ ED +
Sbjct: 179 RYQTRYASRPGAVAAPTAGLHLSDELIAAIRARGVEMAEVTLHVGLGTFRPVETEDLNQL 238
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFI 297
+HSE + +A+ + ++RGGR+++VGTTS+R LE A G + +G N+ I
Sbjct: 239 ELHSEWVEVSPVLVEAVAACRARGGRVIAVGTTSVRSLEAVAQLHGGTLQSHAGPVNLVI 298
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
PGYRF V L++NFHLPKS+LL+LVSA G +Y+ A + YRF+SYGD
Sbjct: 299 QPGYRFAVVQGLLTNFHLPKSSLLLLVSALIGRTRLLDLYEQAKAEGYRFFSYGDA 354
>gi|119356633|ref|YP_911277.1| queuosine biosynthesis protein [Chlorobium phaeobacteroides DSM
266]
gi|166216712|sp|A1BEM6|QUEA_CHLPD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|119353982|gb|ABL64853.1| Queuosine biosynthesis protein [Chlorobium phaeobacteroides DSM
266]
Length = 341
Score = 199 bits (505), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 132/364 (36%), Positives = 188/364 (51%), Gaps = 30/364 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD++LP S IA P R S RL+V+ + I + L FL D +V
Sbjct: 1 MKVSDFDYELPESHIARYPPDERGSTRLLVLQRSTGE---IMHSRYAGLHGFLRKGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGD-ILHFFS 119
NN++V+ A R +I L + V R S +KKGD +L +
Sbjct: 58 LNNSRVVKA-----RMFAFKPTGGKIELVLLEKHGDEQNLVLYRGS--LKKGDALLAYGC 110
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQI-SLVGTIPLPPYIARKRPIDARDYV 178
+ G L G+ + V S+ G + + +P+PPY+ KR + D
Sbjct: 111 EFGVEEL---------VGQGVAVLSVKGEGTVQDVFERYAAMPIPPYL--KREAEEIDRE 159
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT +A+ GSVAAPTA L+ T L L G+ + +TLHVG GTF+P++V+ D+H
Sbjct: 160 RYQTVFAEQPGSVAAPTASLNMTGELFDSLRQKGVSIASMTLHVGLGTFLPIRVDHFDEH 219
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN-----PWSGFT 293
+MH E I T + + K+ GGR+++VGTT R LE A D + N SG
Sbjct: 220 VMHREFYVIPDETIALIRTTKNNGGRVIAVGTTVTRALEHAA--DVVFNSNGNGSVSGEA 277
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PGYRFR +D L++NFH P+ST+LML +AF G E+ Y A+ Y F SYGD+
Sbjct: 278 DIFIYPGYRFRVIDALLTNFHAPRSTVLMLTAAFAGAEKLFHAYAEALRWEYDFLSYGDS 337
Query: 354 SLLF 357
L+
Sbjct: 338 MLIL 341
>gi|160890857|ref|ZP_02071860.1| hypothetical protein BACUNI_03302 [Bacteroides uniformis ATCC 8492]
gi|317479715|ref|ZP_07938837.1| queuosine biosynthesis protein [Bacteroides sp. 4_1_36]
gi|156859856|gb|EDO53287.1| hypothetical protein BACUNI_03302 [Bacteroides uniformis ATCC 8492]
gi|316904085|gb|EFV25917.1| queuosine biosynthesis protein [Bacteroides sp. 4_1_36]
Length = 409
Score = 199 bits (505), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 138/418 (33%), Positives = 211/418 (50%), Gaps = 84/418 (20%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ EF++ LP RIA P+ RD ++L++ +S+ + LP +L S ++FN
Sbjct: 10 ISEFNYPLPDERIAKFPLSVRDQSKLLLYRHG-----EVSEDRFTSLPEYLPSGSLMIFN 64
Query: 63 NTKVITAQLNGVR--------FC---------HINRREKEISCTLHMRVSPNSWSVYARP 105
NTKVI A+L+ + FC +N ++ E + L M + W
Sbjct: 65 NTKVIQARLHFRKETGALIEVFCLEPIQPNDYALNFQQTEHAAWLCMVGNLKKWKEGMLR 124
Query: 106 SKVIKKGDILHFFSQDGQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPP 164
++ KG L ++ G+ + I+ +WN E+ + + I + + G +P+PP
Sbjct: 125 REMTVKGKSLTLTAERGECHGTSHWINFRWNNPEV----TFADI-----LEVFGELPIPP 175
Query: 165 YIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
Y+ R+ D YQT Y+KI+GSVAAPTAGLHFT +L L + G+++ +TLHVGA
Sbjct: 176 YLNRE--TQESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALRNKGVELEELTLHVGA 233
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET------ 278
GTF PVK E+ + H MH+E + T L + GG+ V+VGTTS+R LE+
Sbjct: 234 GTFKPVKSEEIEGHEMHTEYISVSRNT---LEKLIVHGGKAVAVGTTSVRTLESLYHIGV 290
Query: 279 -------ATTEDGIINPWSGF---------------------------------TNIFIT 298
AT ED ++ W + T I I
Sbjct: 291 TLLNNPEATEEDLHVHQWQPYEMSAKATATSAVEALQAIAAYLDRHSMEALHTSTQIIIA 350
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY ++ V +++NFH P+STLL+LVSAF + K+Y +A++H +RF SYGD+SLL
Sbjct: 351 PGYEYKIVKAMVTNFHQPQSTLLLLVSAFVH-GDWPKIYNYALAHDFRFLSYGDSSLL 407
>gi|254457318|ref|ZP_05070746.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacterales bacterium GD 1]
gi|207086110|gb|EDZ63394.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacterales bacterium GD 1]
Length = 342
Score = 199 bits (505), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 134/362 (37%), Positives = 197/362 (54%), Gaps = 30/362 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
++ +DF LP IA P PRD A+L+V N + H D ++ + A++
Sbjct: 6 LLTSSYDFILPDELIATHPASPRDHAKLLVY--NRRTNEIKHCHFY-DFEKYIPKDCALI 62
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI A+L G + +I ++ + N+ +VY R KV + IL F +
Sbjct: 63 FNDTKVIKARLYGHKLS-----GGKIELLINKPLDANNINVYIR-GKVKDETKIL--FDE 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQ-----ISLVGTIPLPPYIARKRPIDAR 175
D LEA V+ + G ++ F L + I +G IPLPPYI R+ +A
Sbjct: 115 D----LEAVVLKLNDDGSRVVNFFQKNKLLRFEDILPIIDRIGHIPLPPYIQRED--NAE 168
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D +YQ+ +A+ +G+VAAPTA LHFT R+ F+TLHVG+GTF PV+ +
Sbjct: 169 DASEYQSVFARQEGAVAAPTASLHFTEEQHERVCKNHDHA-FITLHVGSGTFKPVEAQTI 227
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
DH MHSE I + L+S K I+S+GTTS R +E + G N+
Sbjct: 228 TDHPMHSEYYEISNKAKELLDSDKP----ILSIGTTSTRTVEFYARHKEM---QRGEANL 280
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
F+ P + V+ L++NFHLPKSTLLMLV++F G+E+ +++Y +AI + YRFYSYGD L
Sbjct: 281 FLHPNNKPIRVNYLLTNFHLPKSTLLMLVASFVGVEKAQQLYANAIKNNYRFYSYGDAML 340
Query: 356 LF 357
+
Sbjct: 341 IL 342
>gi|189913086|ref|YP_001964975.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase (queuosine
synthetase) [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|189913420|ref|YP_001964649.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Leptospira
biflexa serovar Patoc strain 'Patoc 1 (Paris)']
gi|167777762|gb|ABZ96062.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase (queuosine
synthetase) [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167781488|gb|ABZ99785.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Leptospira
biflexa serovar Patoc strain 'Patoc 1 (Paris)']
Length = 346
Score = 199 bits (505), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 136/372 (36%), Positives = 186/372 (50%), Gaps = 44/372 (11%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ EFDF LP +IA P RD +RL++V + + D+ +L D +V+
Sbjct: 3 FLNEFDFHLPEEQIARFPAKNRDESRLLLV--DRANETFKEAPFFRDIRNWLKPGDVLVY 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRV---SPNSWSVYARPSKVIKKGDILHFF 118
N TKV R ++ I + + + N WS + ++ G+ L
Sbjct: 61 NETKV------SYRRVYLQVESGRIHEAIFLDTLEDNANIWSCILKNRAKLRLGENL--- 111
Query: 119 SQDGQSRLEATVIDKWNTG--EILLVFSISGIEL-----ERQIS-----LVGTIPLPPYI 166
W G E V+ EL ER I+ + GTIP+PPY+
Sbjct: 112 ---------------WPVGFKEFPFVYESKDNELSLLRSERTITDLDFEVFGTIPIPPYL 156
Query: 167 ARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGT 226
RK D D YQT +AK GSVAAPTAGLHFT +L LI +GI+ V L VG GT
Sbjct: 157 KRKAIED--DKFRYQTIFAKKSGSVAAPTAGLHFTDSLKLELIQLGIQFVPVNLQVGYGT 214
Query: 227 FMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGI 285
F P+ E +H E I +A LNS K G RI++VGTTSLR+LET ++
Sbjct: 215 FRPLTTEQWQTKTLHKERYEITDESASQLNSAKKEGRRIIAVGTTSLRVLETVFDSQQQK 274
Query: 286 INPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAY 345
G T+IF++PG +V L++NFHLPKS+LL+LVSAF YQ+A+ + +
Sbjct: 275 FKVGLGQTDIFLSPGDNIESVHGLITNFHLPKSSLLLLVSAFANSRLVMNAYQYALQNQF 334
Query: 346 RFYSYGDTSLLF 357
RFYSYGD+ LF
Sbjct: 335 RFYSYGDSMFLF 346
>gi|262195614|ref|YP_003266823.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase [Haliangium
ochraceum DSM 14365]
gi|262078961|gb|ACY14930.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase [Haliangium
ochraceum DSM 14365]
Length = 368
Score = 198 bits (504), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 137/380 (36%), Positives = 195/380 (51%), Gaps = 50/380 (13%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
++ FDLP +IA P RD +RL+++ + D D+ L ++ +V N+T
Sbjct: 6 DYHFDLPDGQIAQLPSAQRDDSRLLLLRAGAA----AEDRGFRDIIDLLPADAVLVVNDT 61
Query: 65 KVITAQL-------NGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+V+ A+L V + R E +R W R SK +++G L
Sbjct: 62 RVLPARLRARKHSGGAVELLFLERVE--------VRGVSEQWRCMGRSSKPLREGAQLRV 113
Query: 118 FSQDGQSRLEAT------VIDKWNTGEILLVFSISG-IELERQISLVGTIPLPPYIARKR 170
+ D + L T ++ G +L+ + G + LER G +PLPPYIAR
Sbjct: 114 LASDAEGVLAETGDTVSIAGERGEDGTLLVDIAGDGRLLLER----AGELPLPPYIARPE 169
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
+ D YQT +A+ G+VAAPTAGLHFT +L L + G + +TLHVG GTF+PV
Sbjct: 170 GPETLDSERYQTIFARAPGAVAAPTAGLHFTPAILDALQAKGAAIAPLTLHVGPGTFLPV 229
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDG------ 284
+ E+ H MH E + TA + S G +V+VGTT +R LE+A
Sbjct: 230 RTEEIAAHHMHLERYEVPETTAALVAS----GRPVVAVGTTCVRALESAARAAARDQDRD 285
Query: 285 --------IINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKM 336
+ P G T++FITPGYRFRAVD +++NFHLP+STLLMLV AF G
Sbjct: 286 RDDGARRLAVGP--GQTDLFITPGYRFRAVDWMVTNFHLPESTLLMLVCAFAGYRRVLDS 343
Query: 337 YQHAISHAYRFYSYGDTSLL 356
Y+HA+ YRF+SYGD L+
Sbjct: 344 YRHAVDAGYRFFSYGDAMLV 363
>gi|224531909|ref|ZP_03672541.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
valaisiana VS116]
gi|224511374|gb|EEF81780.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
valaisiana VS116]
Length = 346
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 135/365 (36%), Positives = 193/365 (52%), Gaps = 32/365 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF F+LP S IA P R S+RLMV+ P L + ++ V+++ ++NS+ I+
Sbjct: 1 MKTKEFHFNLPHSLIAQYPSEKRGSSRLMVLDPKLQK--IYHENSVNNILKYINSDTFII 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHM----RVSPNSWSVYARPSKVIKKGDILH 116
FNN+KV +++ E EI + R+ ++ SK ++
Sbjct: 59 FNNSKVRKSRMYA---------ESEIGSNVEFLILDRIGTAMFTALISKSKKQIVDNVYK 109
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIE--LERQISLVGTIPLPPYIARKRPIDA 174
F L ++ K N EI+L F E E+ G +P+PPYI KR D
Sbjct: 110 F-----PEGLIGKILSK-NGSEIVLKFDADVGEDYFEKH----GFVPIPPYI--KRDYDK 157
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D YQT Y+K GS AA TAGLHF +L S I+ FVTLHVG GTF+PV+ +
Sbjct: 158 IDEDRYQTVYSKYIGSAAAATAGLHFGKDLFSVFEKNNIEYDFVTLHVGLGTFLPVRSKR 217
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFT 293
++H MH E I A L + K G +I+S+GTT+LR LE++ T
Sbjct: 218 IEEHKMHFETFLIKDSVADRLENAKFLGKKILSIGTTTLRALESSYDHKLRKFKTGQQST 277
Query: 294 NIFITP--GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
N+FI P Y F+ VD+L +NFH P+STLLMLVS+F G + Y+ A++ +Y+F+SYG
Sbjct: 278 NLFIYPDQNYCFKFVDMLFTNFHTPQSTLLMLVSSFAGKDFVFNSYKEAVNQSYKFFSYG 337
Query: 352 DTSLL 356
D L+
Sbjct: 338 DAMLV 342
>gi|153853722|ref|ZP_01995078.1| hypothetical protein DORLON_01069 [Dorea longicatena DSM 13814]
gi|149753472|gb|EDM63403.1| hypothetical protein DORLON_01069 [Dorea longicatena DSM 13814]
Length = 194
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 97/197 (49%), Positives = 126/197 (63%), Gaps = 4/197 (2%)
Query: 160 IPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVT 219
+PLPPYI + D YQT YA GS AAPTAGLHFT LL + G+ + VT
Sbjct: 1 MPLPPYITHQ----LEDKNRYQTVYATHTGSAAAPTAGLHFTPELLEEIKEKGVDIARVT 56
Query: 220 LHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA 279
LHVG GTF PVKV++ +H MHSE ID A+ +N K G R++ VGTTS R +E+A
Sbjct: 57 LHVGLGTFRPVKVDEITEHHMHSEFFMIDEEAAEKINRAKETGHRVICVGTTSCRTVESA 116
Query: 280 TTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQH 339
E+G + SG+T IFI PGY+F+ +D L++NFHLP+STL+MLVSA G E Y+
Sbjct: 117 ADENGHLEAKSGWTQIFIYPGYKFKVLDCLITNFHLPESTLIMLVSALAGREHVLAAYEE 176
Query: 340 AISHAYRFYSYGDTSLL 356
A+ YRF+S+GD +
Sbjct: 177 AVKERYRFFSFGDAMFI 193
>gi|270295861|ref|ZP_06202061.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. D20]
gi|270273265|gb|EFA19127.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. D20]
Length = 409
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 137/418 (32%), Positives = 211/418 (50%), Gaps = 84/418 (20%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ EF++ LP RIA P+ RD ++L++ +S+ + LP +L S ++FN
Sbjct: 10 ISEFNYPLPDERIAKFPLSVRDQSKLLLYRHG-----EVSEDRFTSLPEYLPSGSLMIFN 64
Query: 63 NTKVITAQLNGVR--------FC---------HINRREKEISCTLHMRVSPNSWSVYARP 105
NTKVI A+L+ + FC +N ++ E + L M + W
Sbjct: 65 NTKVIQARLHFRKETGALIEVFCLEPIQPNDYALNFQQTEHTAWLCMVGNLKKWKEGMLR 124
Query: 106 SKVIKKGDILHFFSQDGQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPP 164
++ KG L ++ G+ + ++ +WN E+ + + I + + G +P+PP
Sbjct: 125 REMTVKGKPLTLTAERGECHGTSHWVNFRWNNPEV----TFADI-----LEVFGELPIPP 175
Query: 165 YIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
Y+ R+ D YQT Y+KI+GSVAAPTAGLHFT +L L + G+++ +TLHVGA
Sbjct: 176 YLNRE--TQESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALRNKGVELEELTLHVGA 233
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET------ 278
GTF PVK E+ + H MH+E + T L + GG+ V+VGTTS+R LE+
Sbjct: 234 GTFKPVKSEEIEGHEMHTEYISVSRNT---LEKLIVHGGKAVAVGTTSVRTLESLYHIGV 290
Query: 279 -------ATTEDGIINPWSGF---------------------------------TNIFIT 298
AT ED ++ W + T I I
Sbjct: 291 TLLNNPEATEEDLHVHQWQPYEMSAKATATSAVEALQAIVAYLDRHSMEALHTSTQIIIA 350
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY ++ V +++NFH P+STLL+LVSAF + K+Y +A++H +RF SYGD+SLL
Sbjct: 351 PGYEYKIVKAMVTNFHQPQSTLLLLVSAFVH-GDWPKIYNYALAHDFRFLSYGDSSLL 407
>gi|21673380|ref|NP_661445.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Chlorobium
tepidum TLS]
gi|34222900|sp|Q8KEY7|QUEA_CHLTE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|21646477|gb|AAM71787.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Chlorobium
tepidum TLS]
Length = 340
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 131/372 (35%), Positives = 188/372 (50%), Gaps = 55/372 (14%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD+ LP RIA P R S RL+V++ I+ + L L D +V
Sbjct: 1 MKVSDFDYALPEERIACYPPAKRGSTRLIVLNRATGS---ITHSAYASLHEELRPGDLLV 57
Query: 61 FNNTKVITAQL-----NGVR--FCHINRREKEISCTLH---MRVSPN------SWSVYAR 104
NN++VI A+L G R + + E+ + L+ +R+ SV A
Sbjct: 58 LNNSRVIRARLIAHKPTGARIELMLLEKHEEAQNLALYRGRLRIGDRLLAHGVELSVEAL 117
Query: 105 PSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPP 164
PS DG +RL TG + +F G ++P+PP
Sbjct: 118 PS--------------DGIARLSCA------TGNLADLFDAHG-----------SVPIPP 146
Query: 165 YIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
Y+ KR + D YQT +A++ GSVAAPTA L+ T LL ++ + G+ + VTLHVG
Sbjct: 147 YL--KRDAEELDRERYQTVFAELPGSVAAPTASLNLTDELLDKINAKGVGIAHVTLHVGL 204
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT---T 281
GTF+P++ E ++H+MH E I A+ + K+ GGR+V+ GTT R LE A
Sbjct: 205 GTFLPIRSERFEEHVMHREFYNIPQTAARKIGETKASGGRVVAAGTTVTRALEHAAPKLI 264
Query: 282 EDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAI 341
E G S +IFI PGY FR +D L++NFH P+ST+LML +AF E + Y A+
Sbjct: 265 ESGFTQEVSSEADIFIYPGYEFRIIDALITNFHAPRSTVLMLTAAFAEKELLMRAYHEAL 324
Query: 342 SHAYRFYSYGDT 353
+ YRF SYGD+
Sbjct: 325 DNGYRFLSYGDS 336
>gi|256027761|ref|ZP_05441595.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. D11]
gi|289765718|ref|ZP_06525096.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. D11]
gi|289717273|gb|EFD81285.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. D11]
Length = 313
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 122/311 (39%), Positives = 183/311 (58%), Gaps = 23/311 (7%)
Query: 52 FLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHM----RVSPNSWSVYARPSK 107
+L D +V N TKVI A++ F H K+ L + R++ ++W +P+K
Sbjct: 21 YLQKGDVLVRNATKVIPARI----FGH-----KDTGGVLEILLIKRITLDTWECLLKPAK 71
Query: 108 VIKKGDILHFFSQDGQSR-LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYI 166
+K G L+ G+++ L A +++ G +L F G E + +G++PLPPYI
Sbjct: 72 KLKLGQKLYI----GENKELIAELLEIKKDGNRILKFYHEG-SFEEILDKLGSMPLPPYI 126
Query: 167 ARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGT 226
RK ++ +D YQT YA+ SVAAPTAGLHFT LL +++ G+++ + L VG GT
Sbjct: 127 TRK--LENKD--RYQTVYAQRGESVAAPTAGLHFTEELLKKILDKGVEIVDIFLEVGLGT 182
Query: 227 FMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII 286
F PV+ + +H MH E I A+ +N K+ G RI+SVGTT+ R LE++ E+G +
Sbjct: 183 FRPVQTVNVLEHKMHEESFEISEKAAKIINEAKTEGRRIISVGTTATRALESSVDENGKL 242
Query: 287 NPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYR 346
T IFI PGY+F+ VD L++NFHLPKSTLLMLVSAF E+ ++Y A+ Y
Sbjct: 243 IGQEKDTGIFIYPGYKFKIVDALITNFHLPKSTLLMLVSAFYDREKMLEIYNLAVKEKYH 302
Query: 347 FYSYGDTSLLF 357
F+S+GD+ ++
Sbjct: 303 FFSFGDSMFIY 313
>gi|298373549|ref|ZP_06983538.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroidetes oral taxon 274 str. F0058]
gi|298274601|gb|EFI16153.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroidetes oral taxon 274 str. F0058]
Length = 351
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 125/360 (34%), Positives = 187/360 (51%), Gaps = 16/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F FDLP IA RD +L+V+H + + D+ ++ + D V
Sbjct: 1 MKLSQFKFDLPEKSIAQYLPKNRDDCKLLVLHKKSE---KVEHKKLIDILSYFDDKDLFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
FNNT+V A + G++ + E I L ++P + W V P++ I+ G+ L+F
Sbjct: 58 FNNTQVFPALMTGIK----EKTEAVIEVFLLRELNPLTKLWDVLVDPARKIRVGNKLYF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDARD 176
+ QS L A VID + L F G E ++ + +G LP YI KRP++ D
Sbjct: 113 -GEDQS-LVAEVIDNTTSRGRTLRFLYDGTHEEFKKALFALGRTSLPAYI--KRPVEDAD 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT +A +G+V AP G+HF+ L+ ++ GI+ F+TLH F + VED
Sbjct: 169 TEAYQTVFASEEGAVVAPFTGIHFSRELMKKMQIKGIEAGFITLHCSLSMFRSIDVEDLQ 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H + SE + AQ N + G +I ++GT+ L LETA T G I +SG+TN F
Sbjct: 229 KHKLDSEQMEVKPEFAQLFNKKSAEGRKICAIGTSVLLTLETAATVPGKIKEYSGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F+ V L+S FHLP ST+LM ++F G + T + Y AI Y+F +GD L+
Sbjct: 289 IFPPYEFQTVGSLLSTFHLPYSTMLMNQASFAGYDLTMQTYNTAIKKGYKFGCFGDLLLI 348
>gi|323344442|ref|ZP_08084667.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
oralis ATCC 33269]
gi|323094569|gb|EFZ37145.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
oralis ATCC 33269]
Length = 388
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 126/392 (32%), Positives = 196/392 (50%), Gaps = 43/392 (10%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVHPNLSC----- 37
M + +F F LP ++AL P V RD +RLMV+H
Sbjct: 1 MKLSQFKFKLPEEQVALYPHSFERKFKNEDGTKETFRVTRRDESRLMVLHKKTQAIEMFK 60
Query: 38 -----PLVISDHL-VSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLH 91
+ D+L ++ + + D +FN+TKV A+L G + + + +I L
Sbjct: 61 KDKKGKPIEGDYLDFRNILDYFDEGDTFIFNDTKVFPARLYGTK----EKTDAKIEVFLL 116
Query: 92 MRVSPNS--WSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNT-GEIL-LVFSISG 147
++ W V P++ I+ G+ L F D S + A VID + G L ++
Sbjct: 117 RELNEEMRLWDVLVEPARKIRIGNKLFF---DDTSTMVAEVIDNTTSRGRTLRFLYDCPH 173
Query: 148 IELERQISLVGTIPLPPYIARKRPID---ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNL 204
E +R++ +G PLP YI R D ++Q +AK +G+V AP GLHF+ L
Sbjct: 174 EEFKRELFALGEAPLPRYIIDNRENHHAVKEDLENFQCIFAKHEGAVTAPATGLHFSREL 233
Query: 205 LSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGR 264
+ R+ GI F+TLH G G F ++VED H M SE IDA + +N+ K G R
Sbjct: 234 MKRMEIRGINFAFITLHCGLGNFHEIEVEDLTKHKMDSEQMIIDAEACEVVNATKKGGHR 293
Query: 265 IVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLV 324
I +VGT+ ++ ETA DG++ +SG+TN FI P Y F + +++NF+ P STLLM
Sbjct: 294 ICAVGTSVVKATETAVGTDGMLKEFSGWTNKFIFPPYDFGLANTMIANFYHPLSTLLMQT 353
Query: 325 SAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+AF G + + Y+ A+ + Y+F +GD+ L+
Sbjct: 354 AAFGGYDLVMQAYEMAVENGYKFGCFGDSLLI 385
>gi|169830865|ref|YP_001716847.1| queuosine biosynthesis protein [Candidatus Desulforudis audaxviator
MP104C]
gi|169637709|gb|ACA59215.1| Queuosine biosynthesis protein [Candidatus Desulforudis audaxviator
MP104C]
Length = 339
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 127/351 (36%), Positives = 191/351 (54%), Gaps = 23/351 (6%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
F++ LP IA +P PRDS+RL+V+ +S+ + S + +L D +V N+TK
Sbjct: 11 FNYHLPWELIAQQPATPRDSSRLLVMD---RGSREVSETVFSAVVNWLEPGDVLVINDTK 67
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSR 125
V+ A+L G + ++ L + + W +P KG +L G S
Sbjct: 68 VMKARLFGKKPTG-----GKLEIFLLHPLGDSRWEALLKP---YPKGGVLLL----GDS- 114
Query: 126 LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYA 185
+ V++K +L F +E + G PLPPYI K P+ +D YQT A
Sbjct: 115 VRVQVLEKTARSTFVLQFPTPEAAVE-AMGKWGETPLPPYI--KEPLADQD--RYQTVLA 169
Query: 186 KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIG 245
K+ GS AAPTA LHFT LL R+ G++V TLH+G G+F P+K E DH + E
Sbjct: 170 KVHGSSAAPTAALHFTPELLQRVRDKGVQVVNFTLHMGVGSFRPIKTEYVADHNLPLEFY 229
Query: 246 FIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRA 305
+ T A+ K +G R+V+ GT ++R LE+A ++ P SG+T++FITPGYRF+
Sbjct: 230 HLPEETVVAVQQAKRQGSRVVACGTDAVRALESAALKE--FRPGSGWTDLFITPGYRFQV 287
Query: 306 VDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
VD +++N HLP S+ L+LVSAF E + Y +A+ +RF S+GD +L+
Sbjct: 288 VDRIITNLHLPCSSHLVLVSAFASREFALQAYAYAVREKFRFLSFGDATLI 338
>gi|194336675|ref|YP_002018469.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Pelodictyon
phaeoclathratiforme BU-1]
gi|194309152|gb|ACF43852.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Pelodictyon
phaeoclathratiforme BU-1]
Length = 346
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 120/360 (33%), Positives = 189/360 (52%), Gaps = 19/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F + LP ++IA P PR ++MV++ I + D+ ++ D +V
Sbjct: 1 MRLSNFRYTLPKTKIADEPASPRGKCKMMVLNRRKKD---IEHKVFEDIVSYFKKGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV---SPNSWSVYARPSKVIKKGDILHF 117
NN++V A++ F + + +I L +RV W V P++ ++ G+ ++F
Sbjct: 58 LNNSRVFPAKI----FGQKEKTDAKIEVFL-LRVLNKEAGLWDVLVDPARKVRVGNKIYF 112
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+ + A V+D + + F I++ + +G IPLPPY R P D
Sbjct: 113 -----EEDVVAEVVDNTTSRGRTIRFLNPDIDVFSLVERIGNIPLPPYFTR--PPRESDK 165
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
+YQT YA G+V AP AGLHFT +L ++ IG+K+ +TLH TF ++VED
Sbjct: 166 ENYQTVYASETGAVVAPMAGLHFTMPILQKIQKIGVKILPITLHPSLSTFNAIEVEDVSK 225
Query: 238 HIMHSEIGFIDAPTAQALNSVK-SRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I TA +N K ++ GR+++VGTT+ R+LE T DG I G+T+ F
Sbjct: 226 HKMDSEYFNIPYQTAMEINETKVNKTGRVIAVGTTTCRVLEANATVDGKIKFGRGWTDKF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y+F+ D L++NF P++TLLM VSAF + Y+ A+ Y+F +YGD +
Sbjct: 286 IYPPYQFKVTDALLTNFQQPETTLLMTVSAFAEHRLLMEAYKTALKEDYQFLAYGDAMFI 345
>gi|282895700|ref|ZP_06303825.1| Queuosine biosynthesis protein [Raphidiopsis brookii D9]
gi|281199394|gb|EFA74259.1| Queuosine biosynthesis protein [Raphidiopsis brookii D9]
Length = 316
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 125/307 (40%), Positives = 170/307 (55%), Gaps = 34/307 (11%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHP---NLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+D++LPP IA PV PRD++RLMV++P L+ PL DH+ DLP L D +V N
Sbjct: 13 YDYELPPELIAQNPVVPRDNSRLMVINPPAGTLTPPL---DHIFRDLPELLKPGDLLVMN 69
Query: 63 NTKVITAQL-----NGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
NT+VI A+L G R + EK+ +C W +P K G + F
Sbjct: 70 NTRVIPARLYGRKSTGARVEVLLLEEKQHNC----------WLALVKPGKYFNIGTEIIF 119
Query: 118 FSQDGQS------RLEATVIDK-WNTGEILLVFSIS-GIELERQISLVGTIPLPPYIARK 169
Q S +L ATVI++ NTG LL F + + L + +G IPLPPYI
Sbjct: 120 DDQGLSSVNKLIPQLTATVIERDENTGGRLLRFDLPINVSLLHFLHKLGKIPLPPYINNS 179
Query: 170 RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
++ + YQT YAK G+VAAPTAGLHFT LL +L GI+ F+TLHVG GTF P
Sbjct: 180 HALEEQ----YQTVYAKHDGAVAAPTAGLHFTPELLVKLRESGIQQEFLTLHVGVGTFRP 235
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPW 289
V+VED H MH E + + + + K+ GGRI++VGTT +R LE A + G + P+
Sbjct: 236 VEVEDVTTHQMHEEWIEVSGDLVEKIYATKNAGGRIIAVGTTVVRALEGA-AQSGSLQPY 294
Query: 290 SGFTNIF 296
+G N+F
Sbjct: 295 TGKVNLF 301
>gi|317155024|ref|YP_004123072.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfovibrio aespoeensis Aspo-2]
gi|316945275|gb|ADU64326.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfovibrio aespoeensis Aspo-2]
Length = 364
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 133/369 (36%), Positives = 193/369 (52%), Gaps = 29/369 (7%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ + + LP RIA P RD +RL+V+ S L+ LP + +V
Sbjct: 9 LSSYHYTLPEERIAQTPADRRDGSRLLVLDRAGESLRAASFASLMDHLP----PDALLVA 64
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN-------SWSVYA-----RPSKVI 109
NN++VI A++ G + R + + T + P W R SK
Sbjct: 65 NNSRVIPARVFGTK--DTGGRVEFLMLTPLPLMEPQEGTGALTGWRTARAEGLLRASKSP 122
Query: 110 KKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARK 169
K G ++ F + LE +W ++ L + +L+ + +G +PLPPYI
Sbjct: 123 KPGAMVTFADDFQLTALEGGPFGRW---QVELAWRG---DLKDRFEALGHLPLPPYI--H 174
Query: 170 RPIDARDYVDYQTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
RP D YQTTY+ GSVAAPTAGLHFTS+L S L + G +TL+VG GTF
Sbjct: 175 RPDSEADRERYQTTYSDTAKAGSVAAPTAGLHFTSDLRSGLAARGFGWAEITLYVGYGTF 234
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN 287
PV+ D +H MHSE + TA A+ K+ G +V+VGTTS R LE E G I
Sbjct: 235 SPVRCADIREHRMHSEYIEVPEATALAVQQAKAEGRPVVAVGTTSARSLEGMVRESGRIG 294
Query: 288 PWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
+ G T+IFITPGYRF+ VD +++NFHLP+S+L+++++A G + Y A+ + +RF
Sbjct: 295 EFRGETDIFITPGYRFQVVDAMITNFHLPESSLIIMIAALAGRKTVLSAYDFALENGFRF 354
Query: 348 YSYGDTSLL 356
+SYGD L+
Sbjct: 355 FSYGDAMLI 363
>gi|218128584|ref|ZP_03457388.1| hypothetical protein BACEGG_00154 [Bacteroides eggerthii DSM 20697]
gi|217989308|gb|EEC55622.1| hypothetical protein BACEGG_00154 [Bacteroides eggerthii DSM 20697]
Length = 409
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 136/418 (32%), Positives = 212/418 (50%), Gaps = 84/418 (20%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ EF++ LP RIA P+ RD ++L++ +S+ + + LP +L ++ ++FN
Sbjct: 10 ISEFNYPLPDERIAKFPLPVRDQSKLLLYRHG-----EVSEDVFTSLPDYLPADSLMIFN 64
Query: 63 NTKVITAQLNGVR--------FC---------HINRREKEISCTLHMRVSPNSWSVYARP 105
NTKVI A+L+ + FC +N ++ E + L M + W
Sbjct: 65 NTKVIQARLHFHKETGALIEVFCLEPIRPNDYALNFQQTEHAAWLCMIGNLKKWKEGVLK 124
Query: 106 SKVIKKGDILHFFSQDGQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPP 164
+++ KG L ++ G + +D +WN EI + + I + + G +P+PP
Sbjct: 125 REMVVKGKPLTLTAERGACHGTSHWVDFRWNNPEI----TFADI-----LEVFGELPIPP 175
Query: 165 YIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
Y+ R+ D YQT Y+KI+GSVAAPTAGLHFT +L L G+++ +TLHVGA
Sbjct: 176 YLNRE--TQESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALRKKGVELEELTLHVGA 233
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET------ 278
GTF PVK E+ + H MH+E + T L + + G+ V+VGTTS+R LE+
Sbjct: 234 GTFKPVKSEEIEGHEMHTEYISVSRNT---LEKLIAHEGKAVAVGTTSVRTLESLYHIGV 290
Query: 279 -------ATTEDGIINPWSGF---------------------------------TNIFIT 298
AT E+ + W + T I I
Sbjct: 291 TLLNSPDATEEELHVKQWQPYELTPEMASVSPVDALQAIVAYLNRHNMETLHTSTQIIIA 350
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY ++ V +++NFH P+STLL+LVSAF + +K+Y +A++H +RF SYGD+SLL
Sbjct: 351 PGYEYKIVKAIVTNFHQPQSTLLLLVSAFLR-GDWRKIYDYALAHDFRFLSYGDSSLL 407
>gi|313158857|gb|EFR58237.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Alistipes sp. HGB5]
Length = 403
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 141/408 (34%), Positives = 205/408 (50%), Gaps = 64/408 (15%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ EFD+DLP RIA P+ R +++L+V I + +D+ L +VFN
Sbjct: 8 INEFDYDLPDGRIAKFPLAERSASKLLVYRGG-----EIGEAHFADIGDVLPEGQLLVFN 62
Query: 63 NTKVITAQL-----NGVR---FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NTKVI A++ +G R FC + + V WS K K+G +
Sbjct: 63 NTKVIRARIIMHKPSGARIEVFCLEPHDPADYERAFAV-VGRCEWSCIVGNLKKWKEGYV 121
Query: 115 LHFFSQDGQ-SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
F +G+ L A +++ + + + + + +G IP+PPY+ R+ +
Sbjct: 122 EINFEHEGRPEHLRAWLVENRGREHTVRFEWSAAMTFGQLLEYLGRIPIPPYLNRES--E 179
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
DY YQT Y+K +GSVAAPTAGLHFT L+ + + G VTLHVGAGTF+PVK +
Sbjct: 180 EIDYTRYQTVYSKFEGSVAAPTAGLHFTPELIEGMKARGFGFEEVTLHVGAGTFLPVKDD 239
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE----------TATTED 283
D H MH+E + A A+ + + GRI +VGTTS+R LE TA T D
Sbjct: 240 DAARHPMHTE--HFEVRRA-AVARLLEKWGRITAVGTTSVRTLESLTALAWRIRTAGTPD 296
Query: 284 G--IINPWSGF------------------------------TNIFITP-GYRFRAVDILM 310
++ W + T I ITP GY FR V ++
Sbjct: 297 AERVVGQWELYDVPAEFSGREALETLLKYMDEKGLERIKAATQIMITPLGYEFRIVRNIV 356
Query: 311 SNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+NFH PKSTLL+LVSAF G + K++Y++A+ H +RF SYGD+S+L +
Sbjct: 357 TNFHQPKSTLLLLVSAFVG-GDWKRIYEYALGHGFRFLSYGDSSVLMR 403
>gi|285808237|gb|ADC35771.1| queuosine biosynthesis protein [uncultured bacterium 293]
Length = 310
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 127/315 (40%), Positives = 178/315 (56%), Gaps = 14/315 (4%)
Query: 48 DLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEI-----SCTLHMRVSP-NSWSV 101
DLPA L D +V N ++VI A+L+G R + E+ + R P SW
Sbjct: 3 DLPALLQPGDLLVLNRSRVIPARLHGRRASG---QPAEVLLLQPADGEKARGGPRESWHA 59
Query: 102 YARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIP 161
RP K ++ GD + D +E + LV + +E + I G +P
Sbjct: 60 LLRPGKRLRAGDSISI-GDDLTLHVEDAPAQADGRRRVTLVAARGTVE--QAIERDGHVP 116
Query: 162 LPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLH 221
LPPYI +R D + YQT YA+ +GSVAAPTAGLH + + + L + G++ V LH
Sbjct: 117 LPPYI--RRGDTPADRLRYQTIYARERGSVAAPTAGLHLSERVFTALRARGVEWTEVLLH 174
Query: 222 VGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT 281
VG GTF PV+ E +DH + E I A A+ + ++RGGR+V+VGTT++R LE+A
Sbjct: 175 VGPGTFQPVRAEQVEDHRLPPEPAVIPEEAAAAVAAARARGGRVVAVGTTAVRALESAAG 234
Query: 282 EDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAI 341
+DG + P + T++ I PGYRFR VD L++NFHLP+S+LL+LV+AF E Y HA+
Sbjct: 235 DDGRLRPGARETDLVIVPGYRFRVVDALLTNFHLPRSSLLLLVAAFTSRERVLDAYAHAV 294
Query: 342 SHAYRFYSYGDTSLL 356
YRFYSYGD LL
Sbjct: 295 RAGYRFYSYGDAMLL 309
>gi|224373166|ref|YP_002607538.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Nautilia
profundicola AmH]
gi|223589238|gb|ACM92974.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Nautilia
profundicola AmH]
Length = 336
Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 137/369 (37%), Positives = 200/369 (54%), Gaps = 48/369 (13%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
MV +D++LP + IA PV PRDSA+L+V I+ + ++ F+ + +F
Sbjct: 1 MVSSYDYNLPENLIARYPVTPRDSAKLLVYDRKTDR---ITHTVFRNILDFVGES-HFIF 56
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHM---RVSPNSWSVYARPSKVIKKGDILHFF 118
NNTKVI A++ G KE + + R + + VY R +K G L F
Sbjct: 57 NNTKVIKARIFGT---------KETGGKVELLLNRPYRDGYLVYIRGK--VKPGSRLFF- 104
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG-----------IELERQISLVGTIPLPPYIA 167
L A V++ + G ++ F + ++L + + +G +PLPPYI
Sbjct: 105 ----DKGLMAEVVELLDDGSRVVKFKVKSEKCKTEKEIDFLQLVKILEEIGHVPLPPYI- 159
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
KR + D +YQT +AK +G+VAAPTA LHFT LL+++ K ++TLHVGAGTF
Sbjct: 160 -KREDEKIDEKEYQTVFAKKEGAVAAPTASLHFTDELLNKID----KKSYLTLHVGAGTF 214
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN 287
PV VED +H MHSE I TA+ L+ + IV+VGTT R +E
Sbjct: 215 KPVDVEDIREHKMHSEFFEIPEDTARVLDGSEE----IVAVGTTVTRTVEYYAR----TG 266
Query: 288 PWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
SG ++F+ P V+ L++NFHLPKSTL+MLV+AF G ++T ++Y+ AI + YRF
Sbjct: 267 KLSGECDLFLNPLNPPIRVNHLLTNFHLPKSTLIMLVAAFIGRKKTLELYEEAIKNEYRF 326
Query: 348 YSYGDTSLL 356
YSYGD L+
Sbjct: 327 YSYGDAMLI 335
>gi|116329699|ref|YP_799418.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase (queuosine
synthetase) [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116332583|ref|YP_802300.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase (queuosine
synthetase) [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116122592|gb|ABJ80485.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase (queuosine
synthetase) [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116127450|gb|ABJ77542.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase (queuosine
synthetase) [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 347
Score = 196 bits (498), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 136/361 (37%), Positives = 193/361 (53%), Gaps = 22/361 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+KEF+F L RIA P RD +RLMV+ N+ + S+ +L ++L D +V N
Sbjct: 6 LKEFEFTLSEERIARYPAANRDESRLMVLDVNVGN--IFSESSFKNLVSYLKEGDVLVAN 63
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKV ++ + R E T+ + W R SK +K G L S +
Sbjct: 64 HTKVSKRRV----YLKTQIRTHE---TMFLEEKELLWKCKIRNSKKLKVGTKL---SDEK 113
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
R+ TV K GE + + ++ E +G IP+PPY KR D +D + YQT
Sbjct: 114 TQRISFTVEKK--EGEFVFLKPEQTLQ-EEDFQQIGEIPIPPYF--KRNPDPKDEIRYQT 168
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
+AK GSVAAPTAGLHF+ ++ L I+ + L VG GTF P+ E+ + +H
Sbjct: 169 LFAKTPGSVAAPTAGLHFSESIFQTLKEKKIRFCTLELKVGYGTFQPLTEENFQNQKLHR 228
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPW---SGFTNIFITP 299
E F++ + + LN K G RI S+GTT+LR LE+A D N + G T +FI P
Sbjct: 229 EEFFLEKSSTEILNLAKKEGRRIFSIGTTTLRALESAY--DYATNSFRSGRGATELFIQP 286
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
R ++ + L++NFHLP S+LL+LVSAF G E K YQ AI +RF+SYGD L+ K
Sbjct: 287 EDRLKSCECLITNFHLPSSSLLLLVSAFAGKELVLKAYQKAIQEKFRFHSYGDAMLILGK 346
Query: 360 R 360
R
Sbjct: 347 R 347
>gi|294055283|ref|YP_003548941.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Coraliomargarita akajimensis DSM 45221]
gi|293614616|gb|ADE54771.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Coraliomargarita akajimensis DSM 45221]
Length = 361
Score = 196 bits (497), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 141/372 (37%), Positives = 195/372 (52%), Gaps = 36/372 (9%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
FDF LP IA P RD++RLMV+ N S V H +D+ FL +N NN
Sbjct: 6 FDFHLPNECIAQEPAATRDASRLMVI--NRSTREVNHVHF-ADIGGFLPTNARFFRNNAA 62
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPN-SWSVYARPSKVIKKGDILHFFSQDGQS 124
V+ A++ G R ++ C L +W RP K + F DG+
Sbjct: 63 VLKARIYGQR-----PSGGKVECLLLQPAEDALTWWCLLRPGKKAAQTG----FEMDGEY 113
Query: 125 RLEATVIDKWNTGEILLVFSISGIELERQIS-LVGTIPLPPYIARKR--PIDARDYVDYQ 181
R E V++ + G + F + E +S +G +PLPPYIAR++ P A D YQ
Sbjct: 114 RAE--VLEAGSNGNYKVRFHLERNETVTDLSERLGIMPLPPYIAREQDDPRRAADNERYQ 171
Query: 182 TTYAKIQG--SVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
T YA +VAAPTAGLHFT L+ +L G + + +TL VG GTF P++VE +DH
Sbjct: 172 TVYADYAKRVAVAAPTAGLHFTPELIDQLSQAGAEFHDLTLQVGIGTFHPIQVEQIEDHN 231
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE-----TATTEDGIINPWSGF-- 292
+H E + + P+A + S G V+VGTTS+R +E T + + + P
Sbjct: 232 IHHE--WYEIPSAAFQSLQDSSSGPRVAVGTTSVRSIEDALSRTQQSPESCLTPTGSVQA 289
Query: 293 -TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFC------GIEETKKMYQHAISHAY 345
+IFI P +F AVD +++NFHLPKSTLL LVSAF GI+ K++Y AI+ Y
Sbjct: 290 EADIFIYPPAKFAAVDHMITNFHLPKSTLLCLVSAFLTPGSTDGIDWLKELYADAIARKY 349
Query: 346 RFYSYGDTSLLF 357
RFYSYGD L+
Sbjct: 350 RFYSYGDAMLIL 361
>gi|297183447|gb|ADI19579.1| s-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [uncultured Acidobacteria bacterium
HF0770_27F21]
Length = 355
Score = 196 bits (497), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 131/366 (35%), Positives = 189/366 (51%), Gaps = 22/366 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLM-VVHPNLSCPLVISDHLVSDLPAFLNSNDAI 59
M ++ FD+ LP IA P RD +RL+ ++ P S++ +++P L D +
Sbjct: 1 MRIELFDYHLPADLIAQSPPERRDESRLLSLIRGVTDKP---SEYRFAEVPELLREGDVL 57
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS----WSVYARPSKVIKKGDIL 115
+ N+ V +L R EI S S W R K ++ G+IL
Sbjct: 58 IVNDAMVAPQRLYAQR---TTGGAVEILLLDDAGASVGSQGSVWEAMIRGGKRLRPGEIL 114
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
+ D + L VI LV + E + G +PLPPYI R R D
Sbjct: 115 YL--DDCATHL---VIHGETKKGRHLVELPANYRAEEVLDRWGQMPLPPYIRRYRG-DEH 168
Query: 176 DYVD---YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+D YQT YA+ G+VAAPTAGLHFT LL ++ G+K+ +TL VG GTF PV+V
Sbjct: 169 GTIDRERYQTVYAREPGAVAAPTAGLHFTQALLEKIERDGVKIETLTLKVGTGTFQPVRV 228
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE-TATTEDGIIN-PWS 290
+H M SE + A+ + K++ GR++ VGTT +R LE A DGI N +
Sbjct: 229 GQVAEHRMESESYVLPDQCVSAIVAAKAKQGRVIGVGTTVVRTLEHAARASDGIENAAGA 288
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G +IFI PG+RF VD +++NFHLP+ST +++ +AF G E + Y+ A+ +RFYSY
Sbjct: 289 GKADIFIYPGFRFHVVDAMLTNFHLPRSTPILMAAAFAGRERLLQAYEFAVRQRFRFYSY 348
Query: 351 GDTSLL 356
GD L+
Sbjct: 349 GDAMLI 354
>gi|319899927|ref|YP_004159655.1| Queuosine biosynthesis protein [Bacteroides helcogenes P 36-108]
gi|319414958|gb|ADV42069.1| Queuosine biosynthesis protein [Bacteroides helcogenes P 36-108]
Length = 409
Score = 195 bits (496), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 135/419 (32%), Positives = 209/419 (49%), Gaps = 86/419 (20%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ EF++ LP RIA P+ RD ++L++ H N +S+ + LP +L + ++F
Sbjct: 10 ISEFNYPLPDERIAKFPLSVRDQSKLLIYRHGN------VSEDTFTSLPEYLTAGSLMIF 63
Query: 62 NNTKVITAQLNGVR--------FC---------HINRREKEISCTLHMRVSPNSWSVYAR 104
NNTKVI A+L+ + FC +N ++ E + L M + W
Sbjct: 64 NNTKVIQARLHFRKDTGALIEVFCLEPIEPNDYALNFQQTEHAAWLCMIGNLKKWKEGVL 123
Query: 105 PSKVIKKGDILHFFSQDGQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLP 163
++ KG ++ ++ G+ + +D +W+ E+ + + I + + G +P+P
Sbjct: 124 KREMEVKGKMITLTAERGECHGTSHWVDFRWDNPEV----TFADI-----LEVFGELPIP 174
Query: 164 PYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVG 223
PY+ R+ D YQT Y+KI+GSVAAPTAGLHFT +L L GI+ +TLHVG
Sbjct: 175 PYLNRE--TQESDKETYQTVYSKIKGSVAAPTAGLHFTPQVLDALRDKGIETEELTLHVG 232
Query: 224 AGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET----- 278
AGTF PVK E+ + H MH+E + T L + + G+ ++VGTTS+R LE+
Sbjct: 233 AGTFKPVKSEEIEGHEMHTEYISVSRNT---LKRLIAHEGKAIAVGTTSVRTLESLYHIG 289
Query: 279 --------ATTEDGIINPWSGF---------------------------------TNIFI 297
A D + W + T I I
Sbjct: 290 VTLLNNPDAKETDLHVKQWQPYEIPAEATPILATDALQAIIRYLDRHDMETLHTSTQIII 349
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY +R V +++NFH P+STLL+LVSAF + +K+Y +A+ H +RF SYGD+SLL
Sbjct: 350 APGYEYRIVKAMVTNFHQPQSTLLLLVSAFVH-GDWRKVYNYALEHNFRFLSYGDSSLL 407
>gi|123967993|ref|YP_001008851.1| queuosine biosynthesis protein [Prochlorococcus marinus str.
AS9601]
gi|229619923|sp|A2BPN3|QUEA_PROMS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|123198103|gb|ABM69744.1| Queuosine biosynthesis protein [Prochlorococcus marinus str.
AS9601]
Length = 374
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 124/354 (35%), Positives = 189/354 (53%), Gaps = 14/354 (3%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
+D+ L PS IA +P R ++RLM+V + +++ ++L D +V NNTK
Sbjct: 17 YDYLLDPSLIASKPSAIRHASRLMIVRNSFLEEDCLTNKFTNNLLDEFREGDLVVVNNTK 76
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQS- 124
V+ A+L V +K + + R W A+P+K +K L S Q
Sbjct: 77 VMKARLK-VEL----ENKKLVELLVLERSHECVWLCLAKPAKKLKINRKLKLKSPLEQEI 131
Query: 125 RLEATVIDKWNTGE-ILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
L +D+ G I +I+ + + + G IPLPPYI D+ YQT
Sbjct: 132 NLIVDGVDEETGGRFIKFPENITCLNSMNELLDKYGEIPLPPYIKNSEE-DSFHEKSYQT 190
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA G+VAAPTAGLH + +L+S L G+ + +TLHVG GTF P+ ED + +H
Sbjct: 191 EYATNPGAVAAPTAGLHLSKSLISNLKKKGVIILPITLHVGYGTFKPIDQEDLSNLKLHK 250
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN---PWSGFTNIFITP 299
E ++ + +K +I+++GTTS+R LE+ + + IN P + + N+ I P
Sbjct: 251 EWVSVNKEVVNEIKRIKKTDRKIIAIGTTSVRALESCYSHE--INDFIPIAKYVNLVIKP 308
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
GY+F+ VD L++NFHLPKS+LL+LVSA G E ++Y+ AI +RF+SYGD
Sbjct: 309 GYKFKVVDGLLTNFHLPKSSLLLLVSAMIGRERLLELYKKAIKEKFRFFSYGDA 362
>gi|124002643|ref|ZP_01687495.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Microscilla
marina ATCC 23134]
gi|123991871|gb|EAY31258.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Microscilla
marina ATCC 23134]
Length = 415
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 139/411 (33%), Positives = 203/411 (49%), Gaps = 75/411 (18%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
++++ LP RIA P+ RD ++L+V I DLP L ++ +VFNNT
Sbjct: 16 DYNYTLPEERIAKSPLMQRDQSKLLVYQSG-----NIQHQHFYDLPQHLPADTMLVFNNT 70
Query: 65 KVITAQLNGVR--------FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
KVI A+L + F EI+ +H + W + KG IL
Sbjct: 71 KVIPARLYFQKPTGALIEVFLLKPEAPHEIAAAMHTG-NGCIWHCMIGNKRKWNKGLILE 129
Query: 117 FFSQDGQSRLEATVID---KWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
+G L+A + D +W + ++ S + +++ G +PLPPY+ RK
Sbjct: 130 QVLPNGLV-LKAELTDSEKQW----VRFEWNNSHVSFAEVLAMTGELPLPPYLKRK--AT 182
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
+D YQT Y+K +G+VAAPTAGLHFT ++S+L GI+ F+TLHV AGTF PVKVE
Sbjct: 183 QKDADQYQTVYSKFEGAVAAPTAGLHFTPEVISQLQDKGIQTEFLTLHVSAGTFQPVKVE 242
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-------TTEDGII 286
+ +H MHSE I Q + + G IV+VGTTS+R+LE+ E+ +
Sbjct: 243 NVIEHDMHSEQLVIH---KQNIEHLLHHSGNIVAVGTTSMRVLESVYWLGVRLLKENYEL 299
Query: 287 NP-------------WS---------------------------GFTNIFITPGYRFRAV 306
P W G T IFI P Y F+
Sbjct: 300 LPGTPFQIDKLLPYQWENNDLPTRQEALQAILNYMNRQELGKLWGATEIFIFPRYEFKMC 359
Query: 307 DILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
L++N+HLPK+TL++LV+AF G + +K+Y A++ YRF SYGD+SLL+
Sbjct: 360 KGLITNYHLPKTTLILLVAAFVG-NDWEKIYNEALAKDYRFLSYGDSSLLW 409
>gi|78778786|ref|YP_396898.1| queuosine biosynthesis protein [Prochlorococcus marinus str. MIT
9312]
gi|123554578|sp|Q31CD3|QUEA_PROM9 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|78712285|gb|ABB49462.1| queuosine biosynthesis protein [Prochlorococcus marinus str. MIT
9312]
Length = 378
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 125/355 (35%), Positives = 189/355 (53%), Gaps = 16/355 (4%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
+D+ L PS IA +P R +RLM+V ++ +++ +L D +V NNTK
Sbjct: 17 YDYFLDPSLIASKPSAIRHESRLMIVRNSVLEEDCLTNKFTKNLLDEFREGDLVVVNNTK 76
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQS- 124
V+ A+L + R + + R W A+P+K +K L S Q
Sbjct: 77 VMKARLK----VELENRTL-VELLVLERSDECVWLCLAKPAKKLKINRKLKLKSPSEQDI 131
Query: 125 RLEATVIDKWNTGEILLVFSISGIELERQISLV---GTIPLPPYIARKRPIDARDYVDYQ 181
L +D+ TG + F + +L +L+ G IPLPPYI ++ YQ
Sbjct: 132 NLMVDGVDE-ETGGRFIKFPENITDLNSMNNLLDKYGEIPLPPYIKNSEE-ESFHENSYQ 189
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YA G+VAAPTAGLH + +L+S L G+ + +TLHVG GTF P+ ED + +H
Sbjct: 190 TEYAINPGAVAAPTAGLHLSKSLISNLKKKGVIILPITLHVGYGTFKPIDQEDLTNLKLH 249
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN---PWSGFTNIFIT 298
E ++ + + +K RI+++GTTS+R LE+ + + IN P + + ++ I
Sbjct: 250 KEWVSVNKEVVEEIKRIKKTDRRIIAIGTTSVRALESCYSHE--INDFIPIAKYVDLVIK 307
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
PGY+FR VD L++NFHLPKS+LL+LVSA G E +Y+ AI +RF+SYGD
Sbjct: 308 PGYKFRVVDGLLTNFHLPKSSLLLLVSAMIGRERLLDLYKKAIKEKFRFFSYGDA 362
>gi|315638562|ref|ZP_07893738.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter upsaliensis JV21]
gi|315481406|gb|EFU72034.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter upsaliensis JV21]
Length = 339
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 131/362 (36%), Positives = 199/362 (54%), Gaps = 32/362 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +D+ LP IA P P+++ARL++ I+ ++L FL + AI
Sbjct: 5 LKLSNYDYFLPKELIATHPAQPKEAARLLIYEREKD---KITHSTFANLEQFL-PDCAIF 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI A++ G + +I LH VS ++ R +KKG+ILHF
Sbjct: 61 FNDTKVIKARIYGKK-----ESGGKIELFLHSSVSECEFNAQIRGR--VKKGEILHF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFS-----ISGIELERQISLVGTIPLPPYIARKRPIDAR 175
+ L A +++ + G + F ++ +L + +G IPLPPYI KR +
Sbjct: 111 --KEGLSAEILELYADGLRKVCFKQDENLLNTPKLYALLEKIGHIPLPPYI--KRADTLK 166
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D DYQ+ +AK G+VAAPTA LHF+ +L L +++ +TLH+GAGTF V+ ED
Sbjct: 167 DTQDYQSIFAKNLGAVAAPTASLHFSEAMLKSLKKRH-EIHTITLHIGAGTFKSVECEDI 225
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+H MHSE I+ ++S K+ I+ VGTT+ R +E G+ SG ++
Sbjct: 226 REHQMHSEFFHINEAAKACIDSKKA----ILGVGTTATRSIEY-YARTGL---CSGACDL 277
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
F+ P + + L++NFHLPKSTL+MLVS+F G E+T +Y+ A+S YRFYSYGD L
Sbjct: 278 FLHPFNKPLRQNFLLTNFHLPKSTLIMLVSSFIGREKTLALYKEAVSLRYRFYSYGDAML 337
Query: 356 LF 357
+
Sbjct: 338 IL 339
>gi|311746512|ref|ZP_07720297.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Algoriphagus sp. PR1]
gi|311302533|gb|EFQ79227.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Algoriphagus sp. PR1]
Length = 405
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 139/415 (33%), Positives = 210/415 (50%), Gaps = 81/415 (19%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHL-VSDLPAFLNSNDAIVF 61
+K +++ LP RIA P+ RDS++L++ + N S HL ++P + S +V+
Sbjct: 10 LKAYEYTLPEDRIAKFPLEKRDSSKLLL-YKNKSI-----QHLQFYNIPELIPSESLLVY 63
Query: 62 NNTKVITAQL-----NGVR---FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGD 113
N+TKVI A+L G R F + + + P +W +K K+G+
Sbjct: 64 NDTKVIPARLIFQRVTGARIEIFLLQPVAPTTVIPEIMLAKHPVTWETMIGNAKKWKEGE 123
Query: 114 ILHFFSQ--DGQSRLEATVIDK--------WNTGEILLVFSISGIELERQISLVGTIPLP 163
LH D +L A ++DK W+ EI V + G G +PLP
Sbjct: 124 TLHGLVTLGDKNIKLSAQLVDKNQRRVTFSWDDPEISFVDVVEG---------SGEVPLP 174
Query: 164 PYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVG 223
PY+ RK P++ D YQT Y++ +G+VAAPTAGLHFT+ +LS+L G++ VTLHV
Sbjct: 175 PYLNRK-PVE-DDKNRYQTVYSEKEGAVAAPTAGLHFTNEILSKLKEKGVQTEQVTLHVS 232
Query: 224 AGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET----- 278
AGTF P+K E +H MHSE + P N +K G+I++VGTTS+R LE+
Sbjct: 233 AGTFQPIKAEKITEHPMHSEQ--VHIPIGAIKNFIK-HAGQIIAVGTTSVRTLESLYWFG 289
Query: 279 ------------------------------------ATTEDGIINPWSGFTNIFITPGYR 302
E ++ G T IFI PGY+
Sbjct: 290 VRLIRKETLEFFIPKLYPYENIENLPSSVEAFQSILEHMEKHNLDTLVGSTEIFIFPGYQ 349
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
++ V L++NFH P STL++L++ G ++ KK+Y+ A+++ YRF SYGD+SLL+
Sbjct: 350 YKVVKGLITNFHQPGSTLILLIATILG-DDWKKVYEEALNNNYRFLSYGDSSLLW 403
>gi|123965702|ref|YP_001010783.1| queuosine biosynthesis protein [Prochlorococcus marinus str. MIT
9515]
gi|229892796|sp|A2BV65|QUEA_PROM5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|123200068|gb|ABM71676.1| Queuosine biosynthesis protein [Prochlorococcus marinus str. MIT
9515]
Length = 373
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 127/357 (35%), Positives = 194/357 (54%), Gaps = 20/357 (5%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
+D+ L S IA +P R +RLM+V + ++ DL A L D +V N+TK
Sbjct: 17 YDYCLDESLIAGKPSKVRHESRLMIVRDSSLKEDYSTNKYTKDLLAELREGDLVVINDTK 76
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNS-WSVYARPSKVIKKGDILHF---FSQD 121
V+ A+L + ++ L + S S W A+P+K +K L+ F++D
Sbjct: 77 VMKARLK------VELENGQLVELLVLEKSDQSTWLCLAKPAKKLKINKQLNLKSPFAKD 130
Query: 122 GQSRLEATVIDKWNTGE-ILLVFSISG-IELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+L+ + ID G I +I+ I + + + + G IP+PPYI ++
Sbjct: 131 --IKLKISGIDDETGGRFIKFPENINDLISMNKLLDIFGEIPIPPYIKSSEE-ESFHENS 187
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA G+VAAPTAGLH + +L+S L GI V +TLHVG GTF P+ ED D
Sbjct: 188 YQTEYACNPGAVAAPTAGLHLSKSLISNLKKKGILVMPITLHVGYGTFKPIDQEDLSDLK 247
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT---EDGIINPWSGFTNIF 296
+H E + + + +K R++++GTTS+R LE+ + +D I P + + ++
Sbjct: 248 LHKEWVSVSKKVVEEIKRIKKTDRRVIAIGTTSVRALESCYSYAMKDFI--PIAKYVDLV 305
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
I PGY+F+AVD L++NFHLPKS+LL+LVSA G E +Y+ A +RF+SYGD
Sbjct: 306 IKPGYKFKAVDGLLTNFHLPKSSLLLLVSAMIGRERLLDLYKKATKEKFRFFSYGDA 362
>gi|308233810|ref|ZP_07664547.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Atopobium
vaginae DSM 15829]
gi|328943700|ref|ZP_08241165.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Atopobium
vaginae DSM 15829]
gi|327491669|gb|EGF23443.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Atopobium
vaginae DSM 15829]
Length = 389
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 129/403 (32%), Positives = 199/403 (49%), Gaps = 60/403 (14%)
Query: 1 MMVKEFDFD--LPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDA 58
M+V+ DFD LP RIA P+ PRD+ +L+V+H I D+ ++ D
Sbjct: 1 MIVRTDDFDYVLPQERIAQHPIEPRDACKLLVLHRTTG---EIEHRHFRDIADYMQEGDL 57
Query: 59 IVFNNTKVITAQLNGVRF-----CH---INRREKEISCTLHMRVSPNSWSVYARPSKVIK 110
IV N T+V+ A+L G++ C + RRE + + W P K +K
Sbjct: 58 IVANKTRVLPARLVGLKHGGSAACETLLLKRRED-------LDPMGSVWECLVNPGKRLK 110
Query: 111 KGDILHFFS------QDGQSRLEATVID--KWNTGEILLVFS-ISGIELERQISLVGTIP 161
G + + + L A ++D + N G L+ F+ G+ L+ I G +P
Sbjct: 111 LGACIDYRAGGLHAPATADVVLRAEIMDYLENNRGGRLVKFTPAQGLSLDEAIHQAGHVP 170
Query: 162 LPPYIARKRPIDARDYVDYQTTYA-KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTL 220
LPPYI D YQT Y+ K + S A+PTAGLHFT L+ R+ G++ V L
Sbjct: 171 LPPYITNYEG----DPEKYQTVYSMKEEHSAASPTAGLHFTPELIERIKQKGVQWKTVEL 226
Query: 221 HVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA- 279
VG TF V+ +D H+MH+E + A+++ K+ G +++++GTTS+R LE+A
Sbjct: 227 EVGIDTFRLVEEDDPTQHVMHTERYHVSQDVVDAVHATKAAGHKVIAIGTTSVRSLESAF 286
Query: 280 -------------------------TTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFH 314
T I+ + T+++I PGY + VD +++NFH
Sbjct: 287 DCNATCSEPALCALNFEHAQDSCLLTHRGDIVKRENATTDLYIMPGYTWHVVDCMVTNFH 346
Query: 315 LPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+P+STL+M+VS+F E K YQ AI H YRF S+GD ++
Sbjct: 347 VPRSTLMMMVSSFASRELIMKAYQEAIEHEYRFLSFGDAMIML 389
>gi|119952827|ref|YP_945036.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Borrelia turicatae 91E135]
gi|119861598|gb|AAX17366.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Borrelia turicatae 91E135]
Length = 345
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 130/368 (35%), Positives = 193/368 (52%), Gaps = 39/368 (10%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF FDLP IA P R +RLMV+ + + + ++D+ ++NSN +V
Sbjct: 1 MDTKEFYFDLPCKLIAQYPSEKRGLSRLMVL--DSGNQKIYHNDSINDIFKYINSNTFLV 58
Query: 61 FNNTKVITAQL-------NGVRFCHINRRE-KEISCTLHMRVSPNSWSVYARPSKVIKKG 112
FN+++V +++ + F ++R E + + N VY P ++
Sbjct: 59 FNDSRVRKSRIYAKTEHGGSIEFLILDRLAGDEFTSLISKAKKQNIGKVYMFPQGLL--- 115
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGEILLVFS--ISGIELERQISLVGTIPLPPYIARKR 170
A +I K + E ++ F+ +S E+ G IPLPPYI KR
Sbjct: 116 ---------------AQIISKTDN-EFIIKFNKCVSESYFEQH----GLIPLPPYI--KR 153
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
D D Y+T Y+K GS A+ TAGLHF+ L S+L I+ F+TLHVG GTF+PV
Sbjct: 154 NYDRADEERYRTIYSKYIGSSASATAGLHFSEELFSKLDENNIEYDFITLHVGLGTFLPV 213
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWS 290
+ + ++H MH E I A L K+ G +I+++GTT+LR LE+A +
Sbjct: 214 RTKTIEEHKMHFESFSIKNSVALRLEESKALGKKILAIGTTTLRALESAYDKQKGFVRGE 273
Query: 291 GFTNIFITP--GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
TN+FI P GY F+ VD+L +NFH P+STLLMLVS+F G + Y+ A+ Y+F+
Sbjct: 274 QKTNLFIYPGKGYEFKFVDMLFTNFHTPESTLLMLVSSFGGKDFVFSAYREAVKMNYKFF 333
Query: 349 SYGDTSLL 356
SYGD +L
Sbjct: 334 SYGDATLF 341
>gi|317475610|ref|ZP_07934871.1| queuosine biosynthesis protein [Bacteroides eggerthii 1_2_48FAA]
gi|316908180|gb|EFV29873.1| queuosine biosynthesis protein [Bacteroides eggerthii 1_2_48FAA]
Length = 409
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 135/418 (32%), Positives = 211/418 (50%), Gaps = 84/418 (20%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ EF++ LP RIA P+ RD ++L++ + + + + LP +L ++ ++FN
Sbjct: 10 ISEFNYLLPDERIAKFPLPVRDQSKLLLYRHG-----EVFEDVFTSLPDYLPADSLMIFN 64
Query: 63 NTKVITAQLNGVR--------FC---------HINRREKEISCTLHMRVSPNSWSVYARP 105
NTKVI A+L+ + FC +N ++ E + L M + W
Sbjct: 65 NTKVIQARLHFHKETGALIEVFCLEPIRPNDYALNFQQTEHAAWLCMIGNLKKWKEGVLK 124
Query: 106 SKVIKKGDILHFFSQDGQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPP 164
+++ KG L ++ G + +D +WN EI + + I + + G +P+PP
Sbjct: 125 REMVVKGKPLTLTAERGACHGTSHWVDFRWNNPEI----TFADI-----LEVFGELPIPP 175
Query: 165 YIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
Y+ R+ D YQT Y+KI+GSVAAPTAGLHFT +L L G+++ +TLHVGA
Sbjct: 176 YLNRE--TQESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALRKKGVELEELTLHVGA 233
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET------ 278
GTF PVK E+ + H MH+E + T L + + G+ V+VGTTS+R LE+
Sbjct: 234 GTFKPVKSEEIEGHEMHTEYISVSRNT---LEKLIAHEGKAVAVGTTSVRTLESLYHIGV 290
Query: 279 -------ATTEDGIINPWSGF---------------------------------TNIFIT 298
AT E+ + W + T I I
Sbjct: 291 TLLNSPDATEEELHVKQWQPYELTPEMASVSPVDALQAIVAYLNRHNMETLHTSTQIIIA 350
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY ++ V +++NFH P+STLL+LVSAF + +K+Y +A++H +RF SYGD+SLL
Sbjct: 351 PGYEYKIVKAIVTNFHQPQSTLLLLVSAFLR-GDWRKIYDYALAHDFRFLSYGDSSLL 407
>gi|317502932|ref|ZP_07961027.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
salivae DSM 15606]
gi|315665966|gb|EFV05538.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
salivae DSM 15606]
Length = 422
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 140/428 (32%), Positives = 213/428 (49%), Gaps = 91/428 (21%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
+ + ++D++LP RIA P+ RD ++L++ H + IS+ L +LP +L +
Sbjct: 12 IKINDYDYNLPEERIAKFPLANRDHSKLLIYKHGD------ISEDLFYNLPNYLPKQSLM 65
Query: 60 VFNNTKVITAQLNGVRFCHINRREKE--ISCTLHMRVSPN------------SWSVYARP 105
VFNNTKVI A+++ R+E I L SP+ SW
Sbjct: 66 VFNNTKVIQARIHF-------RKETGALIEIFLMEPASPSDYELMFQTKGHCSWLCMVGN 118
Query: 106 SKVIKKGDILHFFSQDGQSRLEATVIDKWNTGE--------ILLVFSISGIELERQISLV 157
K K+G + +F G+S+ + + K T + + + + + +V
Sbjct: 119 LKKWKEGSLKRYFVIAGKSQTLSASLHKEKTNQSSTGTNYWVDFDWDNDNVNFAEILEVV 178
Query: 158 GTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYF 217
G +P+PPY+ R+ D YQT Y+KI+GSVAAPTAGLHFT+ +L + GI+
Sbjct: 179 GELPIPPYLNRE--TQDSDKKTYQTVYSKIKGSVAAPTAGLHFTNEVLHAIDEHGIEREE 236
Query: 218 VTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE 277
+TLHVGAGTF PVK E+ D H MH+E +I +N +K G ++VGTTS+R LE
Sbjct: 237 LTLHVGAGTFKPVKSEEIDQHEMHTE--YIVVHRHTLINLLK-YGCNAIAVGTTSVRTLE 293
Query: 278 T-------------ATTEDGIINPWS---------------------------------- 290
+ A+ ++ +N W
Sbjct: 294 SLYYIGVKLEQNPDASEDELHVNQWEPYEQSHDGGLVKDITAERSLQNIIDWLDKSDVKV 353
Query: 291 --GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
G T I I PGY+++ V +L++NFH P+STLL+LVSAF + K +Y +A++H +RF
Sbjct: 354 LHGSTQIIIAPGYKYKIVKMLITNFHQPQSTLLLLVSAFVN-GDWKCIYDYALTHDFRFL 412
Query: 349 SYGDTSLL 356
SYGD+SLL
Sbjct: 413 SYGDSSLL 420
>gi|159899314|ref|YP_001545561.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Herpetosiphon aurantiacus ATCC 23779]
gi|159892353|gb|ABX05433.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Herpetosiphon aurantiacus ATCC 23779]
Length = 346
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 127/361 (35%), Positives = 202/361 (55%), Gaps = 24/361 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FD+ LPP RIA P+ PRD +RL+V+ + + + H ++ +L D +V N
Sbjct: 4 IADFDYHLPPERIAQTPIEPRDHSRLLVL--DRATGQLEHRHFY-EIGRYLRPGDLLVAN 60
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+++V+ A+L G + + L + W + + G L G
Sbjct: 61 DSRVLPARLYGQKASG-----GKTELLLLKQRDAQRWEALIKGKVAV--GTRLIITGHRG 113
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
++++ATV + +G ++ F + ++ +G++P PPYI P+ D YQT
Sbjct: 114 -AQVQATVEELLESGSRIICFEQP---INDRLPELGSMPTPPYITA--PLT--DPERYQT 165
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
Y+ GS AAPTAGLH+T L+ ++ ++G+ VTLHVG TF PV+ E+ DH +HS
Sbjct: 166 VYSAQAGSAAAPTAGLHWTPALIEQVKALGVGWASVTLHVGLDTFRPVQTENALDHQIHS 225
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED------GIINPWSGFTNIF 296
E + A TAQA+N+ ++ GGRI++VGTTS R+LET + G I +G+++I+
Sbjct: 226 EWYELSAETAQAINATRAAGGRIITVGTTSTRVLETVSQSQDVSLTAGEIQAAAGWSSIY 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y +R V+ L++NFHLPKSTLL+LVSA + + Y A+ YRF+S+GD L+
Sbjct: 286 IYPPYEYRVVNSLITNFHLPKSTLLLLVSALASRDLIMQAYAEAVERQYRFFSFGDAMLI 345
Query: 357 F 357
Sbjct: 346 I 346
>gi|78188896|ref|YP_379234.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Chlorobium
chlorochromatii CaD3]
gi|78171095|gb|ABB28191.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Chlorobium
chlorochromatii CaD3]
Length = 346
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 123/357 (34%), Positives = 187/357 (52%), Gaps = 21/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F ++LP +IA PRD+ +LMV++ I D+ ++L D +V
Sbjct: 1 MRLSNFRYNLPRHKIANELCEPRDNCKLMVLNRRKK---EIEHKQFEDIASYLKKGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV---SPNSWSVYARPSKVIKKGDILHF 117
NN+KV A++ G + + + +I L +RV W V P++ ++ G+ ++F
Sbjct: 58 LNNSKVFPAKIFGQK----EKTDAKIEVFL-LRVLNKEAGLWDVLVDPARKVRVGNKIYF 112
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARK-RPIDARD 176
+ + A V+D + + F I + + +GTIPLPPY R RP D
Sbjct: 113 -----EEDVVAEVVDNTTSRGRTIRFLNPDINVFELVDRIGTIPLPPYFNRAPRPSDKEH 167
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
Y QT +A G+V AP AGLHFT L + +G+K+ +TLH TF ++VED
Sbjct: 168 Y---QTVFASEIGAVVAPMAGLHFTMPQLQAIQKMGVKILPITLHPSLSTFSAIEVEDVS 224
Query: 237 DHIMHSEIGFIDAPTAQALNSVK-SRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
H M SE I TA +N K S+ GR+++VGTT+ R+LE T DG I G+T+
Sbjct: 225 KHKMDSEYFHIPYQTAMEINETKLSKSGRVIAVGTTTCRVLEANATVDGKIKFGKGWTDK 284
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
FI P Y+F+ D L++ F LP++TL+M VSAF Y+ A+ Y+F +YGD
Sbjct: 285 FIYPPYQFKVTDCLLTTFQLPETTLMMAVSAFADHRLLMDAYKIALKEDYQFLAYGD 341
>gi|302342503|ref|YP_003807032.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Desulfarculus baarsii DSM 2075]
gi|301639116|gb|ADK84438.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Desulfarculus baarsii DSM 2075]
Length = 365
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 127/361 (35%), Positives = 183/361 (50%), Gaps = 20/361 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHL-VSDLPAFLNSNDAIVF 61
+ ++D+DLPP +A +P R ARLM + + + HL V+ L L D +V
Sbjct: 17 LADYDYDLPPELVAQKPAPRRVQARLMALGRDGGP----ARHLRVAHLCKLLRPGDILVL 72
Query: 62 NNTKVITAQL------NGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
N+TKV+ A+L G + + + R R + ++ G L
Sbjct: 73 NDTKVVPARLLVGKESGGRAEVFLLNPALPLERLVDGR---ERHQALVRAHRPVRPGQRL 129
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
DG V+++ G+ ++ + L ++ G PLPPYI R
Sbjct: 130 SLAGADGPWIF---VLERGQRGQAVVELPSGALGLAQRF---GQAPLPPYIRRPNGPSDD 183
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT YA G+VAAPTAGLH + LL+ L G+ + +TLHVG GTF ED
Sbjct: 184 DVRRYQTVYAAKAGAVAAPTAGLHLSHELLAALQRRGVNIARLTLHVGYGTFAEPAPEDL 243
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+H+E ID QA+ + ++ GGR+++VGTTS+R LE G P G+ +I
Sbjct: 244 ARGRLHAEWVEIDEAACQAVATARAAGGRVIAVGTTSMRALEWLAGPGGAPRPRRGWCDI 303
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
I PG+RFRA D L++NFHLP++TLLMLV+A G E Y A+ YRFYS+GD L
Sbjct: 304 LIQPGHRFRAADGLLTNFHLPRTTLLMLVAALIGRERVLAAYAEAVRQRYRFYSFGDGML 363
Query: 356 L 356
+
Sbjct: 364 I 364
>gi|78777854|ref|YP_394169.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sulfurimonas denitrificans DSM 1251]
gi|91207333|sp|Q30PZ7|QUEA_SULDN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|78498394|gb|ABB44934.1| Queuosine biosynthesis protein [Sulfurimonas denitrificans DSM
1251]
Length = 342
Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 133/367 (36%), Positives = 193/367 (52%), Gaps = 40/367 (10%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
++ +DF LP IA +P PRDSA+L+V IS D F+ N A++
Sbjct: 6 LLTSSYDFTLPEELIATQPANPRDSAKLLVYD---RASDEISHVHFYDFEKFIPKNCALI 62
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF--- 117
FN+TKVI A+L G + +I ++ + ++ V+ R +K G + F
Sbjct: 63 FNDTKVIKARLFGQK-----ESGGKIELLINRALDAHNIHVFTRGK--VKIGTKISFGLE 115
Query: 118 -------FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKR 170
+DG + V++ + IL I I I +G IPLPPYI R+
Sbjct: 116 LFAKIIELLEDG-----SRVVNFYKNDSILRFEEILPI-----IDKIGHIPLPPYIQRED 165
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
D D ++YQ+ +AK +G+VAAPTA LHFT R+ + Y +TLHVG+GTF PV
Sbjct: 166 NKD--DEIEYQSVFAKEEGAVAAPTASLHFTKEQHERVCTKFTHAY-ITLHVGSGTFKPV 222
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWS 290
+ E +H MHSE I + L+S S I+SVGTTS R +E
Sbjct: 223 ECEKILEHTMHSEYYDISDRAKELLDSKVS----ILSVGTTSTRTIEFYARNK---EHQR 275
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G N+F+ P + VD +++NFHLPKSTLLMLV++F G+++ +++Y+ AI YRFYSY
Sbjct: 276 GEANLFLHPKNKPLRVDHILTNFHLPKSTLLMLVASFVGVDKAQELYKIAIEKEYRFYSY 335
Query: 351 GDTSLLF 357
GD L+
Sbjct: 336 GDAMLIL 342
>gi|33860963|ref|NP_892524.1| queuosine biosynthesis protein [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
gi|46576939|sp|Q7V2R3|QUEA_PROMP RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|33639695|emb|CAE18865.1| Queuosine biosynthesis protein [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
Length = 374
Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 125/360 (34%), Positives = 193/360 (53%), Gaps = 22/360 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D+ L + IA +P R +RLM+V + ++ +L L D +V N
Sbjct: 14 LEAYDYILDETLIANKPSKVRHESRLMIVRDSSLEEDFTTNKYTKNLLDELRKGDLVVVN 73
Query: 63 NTKVITAQL-----NGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+TKV+ A+L NG K + + + ++W ARP+K +K L+
Sbjct: 74 DTKVMKARLKVELENG----------KLVELLVLEKADQSTWLCLARPAKKLKINSQLNL 123
Query: 118 FSQDGQS-RLEATVIDKWNTGEILLVF--SISG-IELERQISLVGTIPLPPYIARKRPID 173
S + +L + DK TG + F +I+ I + + + G PLPPYI +
Sbjct: 124 KSSLAKDIKLHISGTDK-ETGGRFIKFPENINDLISMNNLLDIYGETPLPPYIKSAEE-E 181
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
+ YQT YA G+VAAPTAGLH + +L+S L GI V +TLHVG GTF P+ E
Sbjct: 182 SFHENSYQTEYASNPGAVAAPTAGLHLSKSLISNLKKKGILVMPITLHVGYGTFKPIDQE 241
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWSGF 292
D + +H E + + + + VK R++++GTTS+R LE+ + E G + P +
Sbjct: 242 DLSNLKLHKEWVRVSSEVVEEIKRVKKTDRRVIAIGTTSVRALESCYSYEMGDLIPIDKY 301
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
++ I PGY+F+ VD L++NFHLPKS+LL+LVSA G E +Y+ AI +RF+SYGD
Sbjct: 302 VDLVIKPGYKFKVVDGLLTNFHLPKSSLLLLVSAMIGRERLLNLYKKAIREKFRFFSYGD 361
>gi|159902945|ref|YP_001550289.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prochlorococcus marinus str. MIT 9211]
gi|238687195|sp|A9BE25|QUEA_PROM4 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|159888121|gb|ABX08335.1| Queuosine biosynthesis protein [Prochlorococcus marinus str. MIT
9211]
Length = 375
Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 138/361 (38%), Positives = 201/361 (55%), Gaps = 20/361 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +D++L IA +P+ PR ARLMVV + L +S V +L L + D +V
Sbjct: 8 LSLSSYDYELDSKLIAQKPLNPRHDARLMVVSKDNGPNLCVSHLKVWNLLDELRAGDLLV 67
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS---WSVYARPSKVIKKGDILHF 117
NNT+V+ A+L VR K + + + P+ W A+P+K GD +
Sbjct: 68 INNTRVLKARLR-VRL-------KSGAMAELLLLEPHGDGRWLCLAKPAKKFLPGDYVWM 119
Query: 118 FSQDGQS-RLEATVIDKWNTGEILLV---FSISGIELERQISLVGTIPLPPYIARKRPID 173
+ + +S +L+ D G I+ FS + +E + G +PLPPYI + P D
Sbjct: 120 EALEQESLKLQVLTKDLETGGRIVQFPQEFS-NRKSIENLLERYGEVPLPPYIRQHDPSD 178
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
A Y QT +A GSVAAPTAGLH + +L+ LI GI+ VTLHVG GTF P++ E
Sbjct: 179 ADRY---QTRFASTPGSVAAPTAGLHLSDEILNALIQRGIEKASVTLHVGLGTFRPIEEE 235
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWSGF 292
D + +HSE + A+ + +SRGGRI +VGTT++R LE + G + + G
Sbjct: 236 DLTNLKLHSEWVEVGEEVVSAVQACRSRGGRIFAVGTTTVRSLEASFLLGGGSMKAFQGL 295
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
++ I PGY+F V+ L++NFHLPKS+LL+LVSA G E ++YQ AI YRF+SYGD
Sbjct: 296 VDLVIKPGYQFGVVNGLLTNFHLPKSSLLLLVSALIGRERLLELYQEAIERKYRFFSYGD 355
Query: 353 T 353
Sbjct: 356 A 356
>gi|57168187|ref|ZP_00367326.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter coli RM2228]
gi|57020561|gb|EAL57230.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter coli RM2228]
Length = 341
Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 135/364 (37%), Positives = 198/364 (54%), Gaps = 33/364 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+++ +D+ LP IA PV P++ A+L+V + IS +L FL + A+
Sbjct: 4 LLLSSYDYTLPNELIATYPVHPKEDAKLLVFERKNN---QISHTTFKNLQDFL-PDCALF 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVY-ARPSKVIKKGDILHFFS 119
FN+TKVI A++ G + +I LH + S++ A+ +KK +IL F
Sbjct: 60 FNDTKVIKARIYGNK-----SSGGKIELFLHQPCLDSQDSLFLAQIKGRVKKDEILSF-- 112
Query: 120 QDGQSRLEATVIDKWNTGEILLVF-----SISGIELERQISLVGTIPLPPYIARKRPIDA 174
+ L+ VI+ + G + F ++ +L + +G IPLPPYI KR +
Sbjct: 113 ---EQNLKVKVIELLDDGLRKVQFFQNDEVLNTFKLYELLDTIGHIPLPPYI--KRSDEK 167
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D DYQ+ +AK G+VAAPTA LHF+ N+L L ++Y +TLHVGAGTF V+ E+
Sbjct: 168 SDLEDYQSIFAKNLGAVAAPTASLHFSENMLENLKKRH-EIYHLTLHVGAGTFKSVECEN 226
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFT 293
++H MHSE I +A++S K +I+ VGTT R +E A T+ GF
Sbjct: 227 LENHKMHSEFFDIPKKACEAIDSQK----KILGVGTTVTRTIEYYARTKQN-----QGFC 277
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
++F+ P D L++NFHLPKSTL+MLVSAF G + K+Y AI YRFYSYGD
Sbjct: 278 DLFLHPHNPPLRQDYLLTNFHLPKSTLIMLVSAFIGRQNCLKLYDIAIKEKYRFYSYGDA 337
Query: 354 SLLF 357
L+
Sbjct: 338 MLIL 341
>gi|288929542|ref|ZP_06423386.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
sp. oral taxon 317 str. F0108]
gi|288329047|gb|EFC67634.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
sp. oral taxon 317 str. F0108]
Length = 388
Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 127/394 (32%), Positives = 192/394 (48%), Gaps = 43/394 (10%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVHP--------- 33
M + +F+F LP IAL P + RD RLMV+H
Sbjct: 1 MKLSQFNFKLPQELIALYPNSVYHEIKNEKGEKEMSRLTRRDECRLMVLHKKSGTIDLFR 60
Query: 34 -NLSCPLVISDHL-VSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLH 91
+ + D L D+ + + D +FN+TKV A+L G++ + + +I L
Sbjct: 61 KDKKGKPIKGDFLQFRDVIDYFDEGDTFIFNDTKVFPARLYGMK----EKTDAKIEVFLL 116
Query: 92 MRVSPNS--WSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNT-GEIL-LVFSISG 147
++ W V P++ I+ G+ L F D + A VID + G L ++
Sbjct: 117 RELNQEMRLWDVLVEPARKIRIGNKLFF---DDSGTMVAEVIDNTTSRGRTLRFLYDCDH 173
Query: 148 IELERQISLVGTIPLPPYIARKRPID---ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNL 204
E +R + +G PLP YI KR D D+QT YA +G+V AP GLHF+ L
Sbjct: 174 DEFKRSLFALGESPLPRYIIDKRENHHGTEEDMEDFQTIYAANEGAVTAPATGLHFSREL 233
Query: 205 LSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGR 264
L R+ GI F+TLH G G F ++VED H + SE I A +N K+ G R
Sbjct: 234 LKRMEIRGINSAFITLHCGLGNFHDIEVEDLTKHKVDSESMHIGAEACAIVNKTKAEGRR 293
Query: 265 IVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLV 324
+ ++GT+ ++ ETA DG++ ++G+TN FI P Y F D +M+NF+ P STLLM
Sbjct: 294 VCAIGTSVVKATETAVGTDGMLKEYTGWTNRFIFPPYDFGLADTMMANFYHPLSTLLMST 353
Query: 325 SAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+AF G + + Y+ A+ + Y+F +GD L+
Sbjct: 354 AAFGGYDLVMEAYRLAVENEYKFGCFGDALLILN 387
>gi|33239854|ref|NP_874796.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
[Prochlorococcus marinus subsp. marinus str. CCMP1375]
gi|46576945|sp|Q7VDH4|QUEA_PROMA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|33237380|gb|AAP99448.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
[Prochlorococcus marinus subsp. marinus str. CCMP1375]
Length = 370
Score = 192 bits (488), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 134/357 (37%), Positives = 196/357 (54%), Gaps = 14/357 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D++L S IA P+ PR +AR++ V L V DL A L + D +V
Sbjct: 9 LLSSYDYELNSSLIAQEPIEPRHNARMLHVSKRSGEGLKAFHLKVWDLLAELRAGDLLVM 68
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L VR R + L W A+P+K ++ GD + +
Sbjct: 69 NDTRVLKARLK-VRL----RNGTFVELFLLEPKGQGRWLCLAKPAKKLRAGDCI-WMESS 122
Query: 122 GQSRLEATVIDK-WNTGEILLVFS---ISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
G+ + +ID+ +TG ++ F ++E + G IPLPPYI R D +D
Sbjct: 123 GEESIPLKIIDQDISTGGRIVQFPELFSDRRKIEPLLEKFGEIPLPPYINR---CDFKDV 179
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YA G+VAAPTAGLH + L L GIK VTLHVG GTF P+ E+ +
Sbjct: 180 NRYQTRYASTPGAVAAPTAGLHLSDQFLEALSQQGIKDAKVTLHVGLGTFRPLVEENLAN 239
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWSGFTNIF 296
+HSE + A+ + RGGR++++GTT++R LE + DG + P+ G ++
Sbjct: 240 LHLHSEWVEVKEEVVSAIKECRDRGGRVIAIGTTTVRSLEASFLAGDGCLKPFKGEVDLV 299
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
I PGY+F VD L++NFHLPKS+LL+LVSA G E ++Y+ AI YRF+SYGD
Sbjct: 300 IKPGYKFGIVDGLLTNFHLPKSSLLLLVSALIGRENLLELYKEAIDQKYRFFSYGDA 356
>gi|32395561|gb|AAP58353.1| QueA [Pseudomonas syringae]
Length = 299
Score = 192 bits (488), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 132/330 (40%), Positives = 179/330 (54%), Gaps = 42/330 (12%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R S+RL+ L P ++ +DL L D +
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLL----TLDGPTGALAHRQFTDLLEHLRPGDLM 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDIL-HFF 118
VFNNT+VI A+L G +K L + V +V+ +L H
Sbjct: 57 VFNNTRVIPARLFG---------QKASGGKLEILVE-----------RVLDSHRVLAHVR 96
Query: 119 SQDGQSRLEATVIDKWNTGEILL----VFSISGIE-----LERQISLVGTIPLPPYIARK 169
S + +ID E++ +F + E LER VG +PLPPYI
Sbjct: 97 SSKSPKPGSSILIDGGGEAEMVARHDALFELRFAEEVLPLLER----VGHMPLPPYI--D 150
Query: 170 RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
RP + D YQT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF P
Sbjct: 151 RPDEGADRERYQTVYAQRAGAVAAPTAGLHFDQPLLEAIAAKGVETAFVTLHVGAGTFQP 210
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPW 289
V+VE +DH MHSE + A+ + ++RGGR+V+VGTTS+R LE+A DG + P+
Sbjct: 211 VRVEQIEDHHMHSEWLEVGQDVVDAVAACRARGGRVVAVGTTSVRSLESA-ARDGELKPF 269
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKST 319
SG T+IFI PG VD L++NFHLP+ST
Sbjct: 270 SGDTDIFIYPGRPSHVVDALVTNFHLPEST 299
>gi|313681725|ref|YP_004059463.1| s-adenosylmethionine/ tRNA-ribosyltransferase-isomerase
[Sulfuricurvum kujiense DSM 16994]
gi|313154585|gb|ADR33263.1| S-adenosylmethionine/ tRNA-ribosyltransferase-isomerase
[Sulfuricurvum kujiense DSM 16994]
Length = 340
Score = 192 bits (487), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 130/362 (35%), Positives = 192/362 (53%), Gaps = 31/362 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
++ +++ LP IA P+ PRD ARL+V + I+ L +FL N I+
Sbjct: 5 LLTSSYEYTLPEELIATHPIHPRDHARLLVYN---RSDKTITHARFDALESFLPENCGII 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI A+L G ++E + L + +++++ +K G IL F
Sbjct: 62 FNDTKVIKARLYG-------KKESGGAIELLINRPHDAYAINVYIKGRVKTGTILLF--- 111
Query: 121 DGQSRLEATVIDKWNTG--EILLVFSISGIELERQISL---VGTIPLPPYIARKRPIDAR 175
L A VI + G E+ + I E + + +G IPLPPY+ R+ D+
Sbjct: 112 --DDTLHAKVIQLHDDGSREVNFYHHENLIRFEELLPILEKIGHIPLPPYLGRED--DSE 167
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D +YQ+ +A +G+VAAPTA LHFT L + S FVTLHVG+GTF PV+ E
Sbjct: 168 DEREYQSVFAHHEGAVAAPTASLHFTDELFDAVCSSHPHA-FVTLHVGSGTFKPVEAEVI 226
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
DH MHSE I + A N ++S ++ +GTTS R +E G N+
Sbjct: 227 TDHPMHSEYFHI---STDAQNLIRS-DLPLLCIGTTSTRTVEYHVR----AKETQGEANL 278
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
F+ P ++ L++NFHLP+STLLMLV++F G+EET ++Y+ AI YRF+SYGD L
Sbjct: 279 FLHPNNPPLRINHLLTNFHLPQSTLLMLVASFVGLEETHRIYREAIDQNYRFFSYGDAML 338
Query: 356 LF 357
+
Sbjct: 339 IL 340
>gi|83815574|ref|YP_445772.1| queuosine biosynthesis protein [Salinibacter ruber DSM 13855]
gi|294507669|ref|YP_003571727.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Salinibacter ruber M8]
gi|83756968|gb|ABC45081.1| Queuosine biosynthesis protein [Salinibacter ruber DSM 13855]
gi|294343997|emb|CBH24775.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Salinibacter ruber M8]
Length = 349
Score = 192 bits (487), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 123/357 (34%), Positives = 193/357 (54%), Gaps = 18/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M EF +D+P +A P P DS+R+MV+ + + D DLP + + D +V
Sbjct: 1 MKRSEFSYDVPEELVAEYPADPPDSSRMMVL--DRESHDINHDKHFHDLPEYFSEGDVLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
N+TKV A+L G + + +I L ++P S W V P++ I+ G+ L+F
Sbjct: 59 VNDTKVYPARLYGQK----KKTGADIQVFLLRELNPESRLWDVVVDPARKIRIGNKLYF- 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIE--LERQISLVGTIPLPPYIARKRPIDARD 176
L A VID + + FS + L ++I +G PLPPYI R+ + RD
Sbjct: 114 ----DDDLIAEVIDNTTSRGRTIRFSFDDVNEALYQKIRDIGETPLPPYIDREVEEEDRD 169
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT +A+ +G+VAAP + LHFT ++L RL G+ V +TLH+G G PV VED
Sbjct: 170 R--YQTIFAENRGAVAAPKSTLHFTEDVLERLKEKGVHVVPITLHIGRGKSKPVDVEDLS 227
Query: 237 DHIMHSEIGFIDAPTAQALN-SVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
H SE I TA+A+N ++ S + + GTT R LE++ + D + P +T++
Sbjct: 228 KHRTDSEEYDIPEETAEAVNRALASDENTVTACGTTVARALESSLSADETVKPDHSWTDL 287
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
F+ P Y F+ V+ +++NFH P+S L+M+ +AF G + + Y+ A YR +++GD
Sbjct: 288 FVYPEYEFKIVERMITNFHRPESMLMMMGAAFAGYDFLFEAYEEAFEEEYRLFAFGD 344
>gi|29349381|ref|NP_812884.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
thetaiotaomicron VPI-5482]
gi|298384910|ref|ZP_06994469.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 1_1_14]
gi|29341290|gb|AAO79078.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
thetaiotaomicron VPI-5482]
gi|298262054|gb|EFI04919.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 1_1_14]
Length = 406
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 137/415 (33%), Positives = 207/415 (49%), Gaps = 81/415 (19%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ E+++ LP RIA P+ RD ++L+V +S+ + + LP +L +VFN
Sbjct: 10 ISEYNYPLPDERIAKFPLAVRDQSKLLVYRHG-----EVSEDVFTSLPDYLPKGSLMVFN 64
Query: 63 NTKVITAQLNGVR--------FCH---------INRREKEISCTLHMRVSPNSWSVYARP 105
NTKVI A+L+ + FC +N ++ E + L M + W A
Sbjct: 65 NTKVIQARLHFRKETGALIEVFCLEPIQPNDYVLNFQQTEHAAWLCMIGNLKKWKDGALK 124
Query: 106 SKVIKKGDILHFFSQDGQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPP 164
++ KG + + G+ R + ID W+ E+ + + I + + G +P+PP
Sbjct: 125 REMTVKGFPITLTATRGECRGTSHWIDFSWDNPEV----TFADI-----LEVFGELPIPP 175
Query: 165 YIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
Y+ R + D YQT Y+KI+GSVAAPTAGLHFT +L L GI + +TLHVGA
Sbjct: 176 YLNRD--TEESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLEALQEKGIDLEELTLHVGA 233
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET------ 278
GTF PVK E+ + H MH+E ++ T + L G V+VGTTS+R LE+
Sbjct: 234 GTFKPVKSEEIEGHEMHTEYISVNRATIKKL---IDHDGCAVAVGTTSVRTLESLYHIGV 290
Query: 279 -------ATTEDGIINPWSGF------------------------------TNIFITPGY 301
AT E+ + W + T I I PGY
Sbjct: 291 TLAENPDATEEELHVKQWQPYEKYDQIPPVVALQKILGYLDRNGLEALHSSTQIIIAPGY 350
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+++ V +++NFH P+STLL+LVSAF + +Y +A++H +RF SYGD+SLL
Sbjct: 351 QYKIVKAMVTNFHQPQSTLLLLVSAFVK-GNWRTIYDYALAHDFRFLSYGDSSLL 404
>gi|57242389|ref|ZP_00370328.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter upsaliensis RM3195]
gi|57017069|gb|EAL53851.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter upsaliensis RM3195]
Length = 339
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 128/362 (35%), Positives = 198/362 (54%), Gaps = 32/362 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +D+ LP IA P P+++ARL++ ++ ++L FL + AI
Sbjct: 5 LQLSNYDYTLPKELIATHPAQPKEAARLLIYEREKD---RVTHSTFANLEQFL-PDCAIF 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI A++ G + +I LH VS ++ R +KKG+ILHF
Sbjct: 61 FNDTKVIKARIYGTK-----ESGGKIELFLHSSVSECEFNAQIRGK--VKKGEILHF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFS-----ISGIELERQISLVGTIPLPPYIARKRPIDAR 175
+ L A +++ + G + F ++ L + +G IPLPPYI KR +
Sbjct: 111 --KEGLSAKILELYADGLRKVCFKQDENLLNTPTLYALLEKIGHIPLPPYI--KRADTLK 166
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D DYQ+ +AK G+VAAPTA LHF+ +L L +++ +TLH+GAGTF V+ ED
Sbjct: 167 DTQDYQSIFAKNLGAVAAPTASLHFSEAMLESLKKRH-EIHTITLHIGAGTFKSVECEDI 225
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+H MHSE I+ ++S K+ I+ VGTT+ R +E G+ SG ++
Sbjct: 226 REHQMHSEFFHINQVAKACIDSKKA----ILGVGTTATRSIEY-YARTGL---CSGACDL 277
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
F+ P + + L++NFHLPKSTL+MLVS+F G ++T +Y+ A++ YRFYSYGD L
Sbjct: 278 FLHPFNKPLRQNFLLTNFHLPKSTLIMLVSSFIGRKKTLALYKEAVTLRYRFYSYGDAML 337
Query: 356 LF 357
+
Sbjct: 338 IL 339
>gi|289809483|ref|ZP_06540112.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
Length = 195
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 94/192 (48%), Positives = 132/192 (68%), Gaps = 4/192 (2%)
Query: 154 ISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGI 213
++ +G +PLPPYI RP + D YQT Y++ G+VAAPTAGLHF LL+ L G+
Sbjct: 5 LNAIGHMPLPPYI--DRPDEDADRELYQTVYSEKPGAVAAPTAGLHFDEPLLAALREKGV 62
Query: 214 KVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSL 273
++ FVTLHVGAGTF PV+V+ +DHIMHSE + A+ + K+RG R+++VGTTS+
Sbjct: 63 EMAFVTLHVGAGTFQPVRVDTIEDHIMHSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSV 122
Query: 274 RLLETA--TTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIE 331
R LE+A + +I P+ G T IFI PGY+++ +D L++NFHLP+STL+MLVSAF G +
Sbjct: 123 RSLESAAQAAKSDLIEPFFGDTQIFIYPGYQYKVIDALITNFHLPESTLIMLVSAFAGYQ 182
Query: 332 ETKKMYQHAISH 343
T Y+ A+
Sbjct: 183 HTMNAYKTAVEQ 194
>gi|317969076|ref|ZP_07970466.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus sp. CB0205]
Length = 340
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 130/337 (38%), Positives = 180/337 (53%), Gaps = 18/337 (5%)
Query: 22 PRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINR 81
PR +ARL+ + C S V +L L D +V NNT+V+ A+L R
Sbjct: 3 PRHAARLLALEGPEGC----SHQTVWELQQLLKPGDLLVVNNTRVLKARLQARRPSG--- 55
Query: 82 REKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQ--SRLEATVIDKWNTGEI 139
+ + V + W A+P+K +K G+IL GQ LE ID G +
Sbjct: 56 --GAVELLVLEPVEGSDWLCLAKPAKRLKPGEILQM-EHPGQPLQPLEIVAIDAETGGRV 112
Query: 140 LL--VFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAG 197
+ + +E ++ G IPLPPYI + + D YQT YA G+VAAPTAG
Sbjct: 113 VRFPAECTTPEAIEALLARYGEIPLPPYIHQH---SSEDDSRYQTRYASRPGAVAAPTAG 169
Query: 198 LHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNS 257
LH + LL L + G++ VTLHVG GTF PV+ ED +HSE + A +A+
Sbjct: 170 LHLSDALLEALEARGVQRTTVTLHVGLGTFRPVETEDLTQLELHSEWVEVSAAAVEAVAQ 229
Query: 258 VKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLP 316
++RGGR+++VGTTS+R LE A G + P +G N+ I PGYRF V L++NFHLP
Sbjct: 230 CRARGGRVIAVGTTSVRSLEAVAQLHGGELQPHAGPVNLVIQPGYRFAVVQGLLTNFHLP 289
Query: 317 KSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
KS+LL+LVSA G +Y+ A + YRF+SYGD
Sbjct: 290 KSSLLLLVSALVGRRRLLDLYEEAKAEGYRFFSYGDA 326
>gi|126642933|ref|YP_001085917.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baumannii ATCC 17978]
Length = 305
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 122/316 (38%), Positives = 171/316 (54%), Gaps = 20/316 (6%)
Query: 45 LVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYAR 104
+ +D+ D +V N+TKV+ A+L G R I + ++ + + +
Sbjct: 1 MFTDIIDLFEEGDLLVLNDTKVMKARLKGKRATG-----GAIEILVERMLNHTTAYCHIK 55
Query: 105 PSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLV-FSISGIELERQISLVGTIPLP 163
S K G L F D VI + + +V FS + + Q G +P+P
Sbjct: 56 ASNSPKAGAEL-FVGADN-----IPVIVRGRHENLFVVEFSQPILPVLEQ---YGQLPIP 106
Query: 164 PYIARKRPIDARDYVDYQTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLH 221
PY R+ + D YQT + + SVAAPTA LHF LL++L G+K FVTLH
Sbjct: 107 PYFNRE--AEEIDTERYQTVFHNPEKIASVAAPTASLHFDEELLAKLDQKGVKKTFVTLH 164
Query: 222 VGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT- 280
VGAGTFMPV+ +D +H+MHSE + T + + K+RG ++++VGTT+ R LE+A
Sbjct: 165 VGAGTFMPVRTDDITNHVMHSEWCDVPQETIDLILATKARGNKVIAVGTTATRALESAAQ 224
Query: 281 TEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHA 340
G I W+G T IFI PGY F VD L++NFHLP+STLLMLVSA E Y+HA
Sbjct: 225 AHGGKIAAWTGDTQIFIYPGYEFCIVDRLITNFHLPESTLLMLVSALSNRENILAAYEHA 284
Query: 341 ISHAYRFYSYGDTSLL 356
+ YRF+SYGD L+
Sbjct: 285 VKDRYRFFSYGDAMLI 300
>gi|313204024|ref|YP_004042681.1| s-adenosylmethionine/tRNA-ribosyltransferase isomerase
[Paludibacter propionicigenes WB4]
gi|312443340|gb|ADQ79696.1| S-adenosylmethionine/tRNA-ribosyltransferase isomerase
[Paludibacter propionicigenes WB4]
Length = 410
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 139/413 (33%), Positives = 204/413 (49%), Gaps = 67/413 (16%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + E+D+ LP RIA P+ RDS++L++ I + S + FL N +V
Sbjct: 10 IYIDEYDYSLPDERIAKYPLAQRDSSKLLLYKNG-----NIGESQFSKIADFLPENALLV 64
Query: 61 FNNTKVITAQL-----NGVR---FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKG 112
+NNT+VI A+L G R FC + + +L S W K K+G
Sbjct: 65 YNNTRVIQARLIFHKNTGARIEVFCLEPLNPADYAQSLGA-TSECVWKCMVGNLKKWKEG 123
Query: 113 DILHFFSQDGQS-RLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKR 170
+ + DG++ EA ++ + NT I + + I + G +P+PPY+ RK
Sbjct: 124 LLSKTIAFDGKTCTFEAELLHTEGNTHSIHFRWDNADIHFADILEKAGELPIPPYLHRK- 182
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
+ D YQT Y+KI+GSVAAPTAGLHFT + L I+ +TLHVGAGTF PV
Sbjct: 183 -TEESDLTSYQTVYSKIKGSVAAPTAGLHFTPEVFESLKPKLIETEELTLHVGAGTFQPV 241
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE------------- 277
K D +H MH+EI + T + ++ + G I++VGTTS+R LE
Sbjct: 242 KTRDIAEHHMHTEIISVKRST---IVHLQQKLGNIIAVGTTSVRTLESLYFIGAMLQQDA 298
Query: 278 -TATTEDGIINP-WSGF------------------------------TNIFITPGYRFRA 305
+ E G P W+ + T I I PGY F
Sbjct: 299 VSEIAEKGFHVPQWAPYEGKMEISTYDALQNILDYLDKNKLTTLHADTQIMIKPGYEFHL 358
Query: 306 VDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+D +++NFH PKSTLL+LVSAF +++Y +A+S+ +RF SYGD+SLL +
Sbjct: 359 IDGMVTNFHQPKSTLLLLVSAFVN-GNWREIYHYALSNNFRFLSYGDSSLLMK 410
>gi|255012412|ref|ZP_05284538.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides sp. 2_1_7]
Length = 404
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 139/411 (33%), Positives = 206/411 (50%), Gaps = 70/411 (17%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++++++ LP RIA P+ RD ++L++ IS+ + + +L N +VFN
Sbjct: 8 IEDYNYSLPDERIAKFPLPKRDESKLLLYRNG-----EISESIFKHITDYLPQNSLMVFN 62
Query: 63 NTKVITAQL-----NGVR---FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NT+VI A+L G R FC + E + SW+ K K+G +
Sbjct: 63 NTRVIQARLLFQKETGARIEIFC-LEPIEPHDYALIFQETRRCSWTCLVGNLKKWKEGTL 121
Query: 115 LH-FFSQDGQSRLEATVIDKWNTGEILLV---FSISGIELERQISLVGTIPLPPYIARKR 170
F +D L A K + G+ L+ + + G +P+PPY+ R+
Sbjct: 122 SKTIFIKDQPVVLTAD--KKKSHGDTHLIEFTWDNETYTFADILDAAGVLPIPPYLHRE- 178
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
+ D YQT Y+KI+GSVAAPTAGLHFTS +L+ + + GI VTLHVGAGTF PV
Sbjct: 179 -TEKSDLQTYQTVYSKIKGSVAAPTAGLHFTSEVLADIDARGIGREEVTLHVGAGTFKPV 237
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET------------ 278
K + + H MH+E FI + ++ +KS G I++VGTTS+R LE+
Sbjct: 238 KSDTIEGHEMHTE--FISVRRS-SIERIKSNLGNIIAVGTTSVRTLESLYYMGVILDNNP 294
Query: 279 -ATTEDGIINPWSGF-------------------------------TNIFITPGYRFRAV 306
AT+ED ++ W + T I I PGY F+ V
Sbjct: 295 EATSEDLVVKQWMPYDMNNNRLTAERSLQNILDYLDKHDADTLVTATQIIIAPGYEFKIV 354
Query: 307 DILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+++NFH PKSTLL+L+SAF K +Y++A+ H +RF SYGD+SLL
Sbjct: 355 KGIVTNFHQPKSTLLLLISAFVK-GNWKSIYEYALEHDFRFLSYGDSSLLL 404
>gi|254527222|ref|ZP_05139274.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prochlorococcus marinus str. MIT 9202]
gi|221538646|gb|EEE41099.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prochlorococcus marinus str. MIT 9202]
Length = 374
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 125/362 (34%), Positives = 190/362 (52%), Gaps = 24/362 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D+ L PS IA +P R +RLM+V ++ +++ +L D +V N
Sbjct: 14 LEAYDYFLDPSLIASKPCAIRHESRLMIVRNSVLEENCLTNKFTKNLLDEFRKGDLLVVN 73
Query: 63 NTKVITA----QLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
NTKV+ A QL + E+ C W A+P+K +K +
Sbjct: 74 NTKVMKARLKVQLENRTLVELLVLERSHECV---------WLCLAKPAKKLKINRKIILK 124
Query: 119 SQDGQS-RLEATVIDKWNTGEILLVFSISGIELERQISLV---GTIPLPPYIARKRPIDA 174
S Q L +D+ TG + F + +L L+ G IPLPPYI ++
Sbjct: 125 SPSAQDINLMVDGVDE-ETGGRFIKFPENITDLNSMNDLLNKYGEIPLPPYIKNSEE-ES 182
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
YQT YA G+VAAPTAGLH + +L+S L G+ + +TLHVG GTF P+ ED
Sbjct: 183 FHENSYQTEYATNPGAVAAPTAGLHLSKSLISNLKKKGVIILPITLHVGYGTFKPIDQED 242
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN---PWSG 291
D +H E ++ + + +K RI+++GTTS+R LE+ +++ IN P +
Sbjct: 243 LSDLKLHKEWVSVNEEVVEEIKKIKKTDRRIIAIGTTSVRALESCYSKE--INDFIPIAK 300
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
+ ++ I PGY+F+ VD L++NFHLPKS+LL+LVSA G E +Y+ AI +RF+SYG
Sbjct: 301 YVDLVIKPGYKFKVVDGLLTNFHLPKSSLLLLVSAMIGRERLLDLYKKAIKEKFRFFSYG 360
Query: 352 DT 353
D
Sbjct: 361 DA 362
>gi|152992047|ref|YP_001357768.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Sulfurovum
sp. NBC37-1]
gi|151423908|dbj|BAF71411.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Sulfurovum
sp. NBC37-1]
Length = 350
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 136/367 (37%), Positives = 191/367 (52%), Gaps = 36/367 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
++ K +D++LP IA PV PRD A+L+V N + HL+ LP + I
Sbjct: 10 LLTKNYDYELPEGFIATEPVHPRDEAKLLVYDRRNDTVTHTTFRHLLDFLPQTCD----I 65
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
N+T+VI A++ G + + ++ + + + + V R +K G L F
Sbjct: 66 FLNDTRVIKARIFGHKLSTDGQGGGKVELLFNKPLDAHHYLVLIRGK--VKTGTQLLF-- 121
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQ-----ISLVGTIPLPPYIARKRPIDA 174
L ATV G ++ F+ G E+ + + +G IPLPPY+ R+ A
Sbjct: 122 ---DDSLMATVTTLNKDGSRIVTFTRHGKEIRFEELVQILDEIGHIPLPPYMQRED--KA 176
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D DYQT +AK G+VAAPTA LHFT L L K + VTLHVGAGTF PV+ E
Sbjct: 177 EDEKDYQTLFAKNAGAVAAPTASLHFTPELFETLQQRH-KTHKVTLHVGAGTFKPVEAEK 235
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE----TATTEDGIINPWS 290
DH MHSE I A+ L+S I+++GTT R +E T TE
Sbjct: 236 ILDHPMHSEYFDIPPEAAKVLDS----DTEILAIGTTVTRTIEYYVRTGKTE-------- 283
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G ++F+ P + V L++NFHLPKSTL+MLVSAF G E+T ++Y+ AI YRF+SY
Sbjct: 284 GECDLFLNPHNPPQRVTHLLTNFHLPKSTLIMLVSAFIGREKTLQLYKEAIEKNYRFFSY 343
Query: 351 GDTSLLF 357
GD L+
Sbjct: 344 GDAMLIL 350
>gi|323345330|ref|ZP_08085553.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
oralis ATCC 33269]
gi|323093444|gb|EFZ36022.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
oralis ATCC 33269]
Length = 404
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 136/413 (32%), Positives = 207/413 (50%), Gaps = 77/413 (18%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++++ LP RIA P+ RD ++L+V +SD L +LP +L +VFN
Sbjct: 8 ISDYNYQLPDERIAKFPISQRDHSKLLVYKHG-----EVSDDLFYNLPEYLPKGALMVFN 62
Query: 63 NTKVITAQLNGVRFCHINRRE--KEISCTLHMRVSPNSWSVYARPS------------KV 108
NTKVI A+++ R+E +I L V P + + + S K
Sbjct: 63 NTKVIQARIHF-------RKETGAQIEVFLLEPVDPTDYELMFQTSEHCSWLCMIGNLKK 115
Query: 109 IKKGDILHFFSQDGQS-RLEATVIDKWNTGE-ILLVFSISGIELERQISLVGTIPLPPYI 166
K+G + F +G L A +++ TG + ++ + + + VG +P+PPY+
Sbjct: 116 WKEGILKRDFEINGHRLTLIAARKEEYGTGHWVDFSWNNNKVSFAEILETVGELPIPPYL 175
Query: 167 ARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGT 226
R D YQT Y+KI+GSVAAPTAGLHFT ++L L + GI +TLHVGAGT
Sbjct: 176 --NRDTQESDKTTYQTVYSKIKGSVAAPTAGLHFTDSVLKDLDTHGIDREELTLHVGAGT 233
Query: 227 FMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-------- 278
F PVK ++ + H MH+E + Q L + + ++VGTTS+R LE+
Sbjct: 234 FKPVKSDEIEGHKMHTEYICVH---RQTLEKLLKHDCQAIAVGTTSVRTLESLYYMGVYL 290
Query: 279 -----ATTEDGIINPWSGF------------------------------TNIFITPGYRF 303
AT E+ + W+ + T I I PGY +
Sbjct: 291 AAHPDATEEELHVGQWTPYETKAMLTPMEAIKNVLSYLDRNGLSALHSSTQIIIAPGYEY 350
Query: 304 RAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ V +L++NFH P+STLL+LVSAF + + +Y +A+SH +RF SYGD+SLL
Sbjct: 351 KIVKMLVTNFHQPQSTLLLLVSAFV-YGDWRTIYNYALSHDFRFLSYGDSSLL 402
>gi|257457753|ref|ZP_05622914.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Treponema
vincentii ATCC 35580]
gi|257444803|gb|EEV19885.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Treponema
vincentii ATCC 35580]
Length = 354
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 135/348 (38%), Positives = 178/348 (51%), Gaps = 23/348 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M K+FDFDLP IA P R + RL+V++ ++D + SDLP FL + +V
Sbjct: 1 MFTKDFDFDLPKELIAQYPSAERGNDRLLVLNRRTG---ALTDAVFSDLPDFLPPDCLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS----WSVYARPSKVIKKGDILH 116
FNNTKV A+L + E E + + P W + +K ++G
Sbjct: 58 FNNTKVRHARL----YARTGSGEAEF-----LLIEPLDEGFVWKTIVKRAKRQREGKEYI 108
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVF-SISGIELERQISLVGTIPLPPYIARKRPIDAR 175
F D +R N E + +R + G IPLPPYI KR
Sbjct: 109 F---DDGTRAVLIPPPSPNAAEADCKYIRFDRCIDDRWLEANGHIPLPPYI--KRGDTDE 163
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT YAK GSVAAPTAGLHFT +L L I VTLHVG GTF+PV+ E
Sbjct: 164 DAERYQTVYAKNTGSVAAPTAGLHFTEPILQELDKRHIARTAVTLHVGLGTFLPVRTEVV 223
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTN 294
++H MHSE FI TA A+ I++VGTTS+R LE+A D ++ T+
Sbjct: 224 EEHTMHSEKFFISDETAAAVEEAHRTEKTILAVGTTSVRTLESAWKSDTQQLSRGMHATD 283
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAIS 342
IFI PG+RF L++NFH P+S+L+MLVSAF G + Y+HAI
Sbjct: 284 IFIYPGFRFGLTGALLTNFHTPQSSLVMLVSAFAGRDNIFAAYRHAIE 331
>gi|256839172|ref|ZP_05544682.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Parabacteroides sp. D13]
gi|298374718|ref|ZP_06984676.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 3_1_19]
gi|256740091|gb|EEU53415.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Parabacteroides sp. D13]
gi|298269086|gb|EFI10741.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 3_1_19]
Length = 404
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 139/410 (33%), Positives = 206/410 (50%), Gaps = 70/410 (17%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++++++ LP RIA P+ RD ++L++ IS+ + + +L N +VFN
Sbjct: 8 IEDYNYSLPDERIAKFPLPKRDESKLLLYRNG-----EISESIFKHITDYLPQNSLMVFN 62
Query: 63 NTKVITAQL-----NGVR---FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NT+VI A+L G R FC + E + SW+ K K+G +
Sbjct: 63 NTRVIQARLLFQKETGARIEIFC-LEPIEPHDYALIFQETRRCSWTCLVGNLKKWKEGTL 121
Query: 115 LH-FFSQDGQSRLEATVIDKWNTGEILLV---FSISGIELERQISLVGTIPLPPYIARKR 170
F +D L A K + G+ L+ + + G +P+PPY+ R+
Sbjct: 122 SKTIFIKDQPVVLTAD--KKKSHGDTHLIEFTWDNETYTFADILDAAGVLPIPPYLHRE- 178
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
+ D YQT Y+KI+GSVAAPTAGLHFTS +L+ + + GI VTLHVGAGTF PV
Sbjct: 179 -TEKSDLQTYQTVYSKIKGSVAAPTAGLHFTSEVLADIDARGIGREEVTLHVGAGTFKPV 237
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET------------ 278
K + + H MH+E FI + ++ +KS G I++VGTTS+R LE+
Sbjct: 238 KSDTIEGHEMHTE--FISVRRS-SIERIKSNLGNIIAVGTTSVRTLESLYYMGVILDNNP 294
Query: 279 -ATTEDGIINPWSGF-------------------------------TNIFITPGYRFRAV 306
AT+ED ++ W + T I I PGY F+ V
Sbjct: 295 EATSEDLVVKQWMPYDMNNNRLTAERSLQNILDYLDKHDADTLVTATQIIIAPGYEFKIV 354
Query: 307 DILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+++NFH PKSTLL+L+SAF K +Y++A+ H +RF SYGD+SLL
Sbjct: 355 KGIVTNFHQPKSTLLLLISAFVK-GNWKSIYEYALEHDFRFLSYGDSSLL 403
>gi|305431668|ref|ZP_07400837.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter coli JV20]
gi|304445263|gb|EFM37907.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter coli JV20]
Length = 341
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 133/364 (36%), Positives = 198/364 (54%), Gaps = 33/364 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+++ +D+ LP IA PV P++ A+L+V + IS +L FL + A+
Sbjct: 4 LLLSSYDYTLPNELIATYPVHPKEDAKLLVFEQKNN---QISHTTFKNLQDFL-PDCALF 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVY-ARPSKVIKKGDILHFFS 119
FN+TKVI A++ G + +I LH + S++ A+ +KK +IL F
Sbjct: 60 FNDTKVIKARIYGNK-----SSGGKIELFLHQPCLDSQDSLFLAQIKGRVKKDEILSF-- 112
Query: 120 QDGQSRLEATVIDKWNTGEILLVF-----SISGIELERQISLVGTIPLPPYIARKRPIDA 174
+ L+A VI+ + G + F ++ +L + +G +PLPPYI KR +
Sbjct: 113 ---EQNLKAKVIELLDDGLRKVQFFQNDEVLNTFKLYELLDTIGHVPLPPYI--KRSDEK 167
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D DYQ+ +AK G+VAAPTA LHF+ N+L L ++Y +TLHVGAGTF V+ E+
Sbjct: 168 SDLEDYQSIFAKNLGAVAAPTASLHFSENMLENLKKRH-EIYHLTLHVGAGTFKSVECEN 226
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFT 293
++H +HSE I + ++S K +I+ VGTT R +E A T+ GF
Sbjct: 227 LENHKIHSEFFDIPKKACEVIDSQK----KILGVGTTVTRTIEYYARTKQN-----QGFC 277
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
++F+ P D L++NFHLPKSTL+MLVSAF G + K+Y AI YRFYSYGD
Sbjct: 278 DLFLHPHNPPLRQDYLLTNFHLPKSTLIMLVSAFIGRQNCLKLYDIAIKEKYRFYSYGDA 337
Query: 354 SLLF 357
L+
Sbjct: 338 MLIL 341
>gi|168699707|ref|ZP_02731984.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Gemmata
obscuriglobus UQM 2246]
Length = 341
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 139/357 (38%), Positives = 187/357 (52%), Gaps = 24/357 (6%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
FD+ LP IA P RD+ARL+VV + I H+ DLP L+ D +V N+T+
Sbjct: 4 FDYHLPEHLIAQHPAAERDAARLLVVRRDTQ---RIQHHIFRDLPELLSPGDLVVLNDTR 60
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNS-WSVYARPSKVIKKGDILHFFSQDGQS 124
V+ A++ G R + E L +R + W + A+ + G + F D
Sbjct: 61 VLPARVVGRREATGGKWEG-----LFLRATETGLWEMLAQTRGYPEVGTV---FVTDTGL 112
Query: 125 RL---EATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
RL T W L+ G E +S G IPLPPYI + R DA D YQ
Sbjct: 113 RLVLRGRTADRHW-----LMQPEAEGTPPE-ILSTYGHIPLPPYIRKGRE-DAGDRERYQ 165
Query: 182 TTYAKIQGSVAA-PTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
T YA A PTAGLHFT + RL + GI VTLHVG GTF PVK +D H +
Sbjct: 166 TVYAGAAAGSVAAPTAGLHFTPAVFDRLTARGIGTARVTLHVGLGTFAPVKEDDPTKHAI 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + T + K+RGGR+V++GTT+ R LE+A DG + + G T +FI
Sbjct: 226 HHEWCAVPQGTVDTIRDTKARGGRVVAIGTTTTRTLESAARPDG-LRSFCGETGLFIHEP 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ FRAVD L++NFHLP++TLL+LV A G E + Y A++ YRF+SYGD L+
Sbjct: 285 FEFRAVDALVTNFHLPRTTLLLLVGALAGDELLARAYAEAVTCEYRFFSYGDAMLVL 341
>gi|255321392|ref|ZP_05362552.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter showae RM3277]
gi|255301545|gb|EET80802.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter showae RM3277]
Length = 342
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 130/356 (36%), Positives = 197/356 (55%), Gaps = 32/356 (8%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
+D+DLPP IA P FP+++ARL+V IS DLP L D I+FN+TK
Sbjct: 13 YDYDLPPELIANFPTFPKENARLLVYE---RASEKISHLKFGDLPKILPPCD-IIFNDTK 68
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSR 125
V+ A++ G + E L+ ++ +SVY + ++ G IL+F G++
Sbjct: 69 VVKARIFGKK-----DSGGETELLLNSPLADAKFSVYIKGK--VRAGSILNF----GEN- 116
Query: 126 LEATVIDKWNTGEILLVFSISGIELE-----RQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A V + + G + FS +G L+ + +S +G +PLPPYI R D + Y
Sbjct: 117 LTAEVCELFEDGSRTVKFSQNGELLDTAALYKILSHIGHVPLPPYIKRSDTKDDESW--Y 174
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
Q+ +AK +G+VAAPTA LHF+ +++RL ++ ++TLHVGAGTF V+ ED H M
Sbjct: 175 QSVFAKNEGAVAAPTASLHFSDEMIARLAK-DREIAYLTLHVGAGTFKGVESEDITQHKM 233
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E F D P Q ++ I+ VGTT R +E E SG +F+
Sbjct: 234 HAE--FYDIP--QDTQNLIRSNRPILGVGTTVTRCVE----EFARSGKSSGECRLFLNLN 285
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ + L++NFHLPKSTL+MLV++F G+ +T ++Y+ A+ Y+FYSYGD L+
Sbjct: 286 NKPIRQNYLLTNFHLPKSTLIMLVTSFVGLRQTMRIYKTAVEQKYKFYSYGDAMLV 341
>gi|325300339|ref|YP_004260256.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
salanitronis DSM 18170]
gi|324319892|gb|ADY37783.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
salanitronis DSM 18170]
Length = 406
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 130/417 (31%), Positives = 205/417 (49%), Gaps = 79/417 (18%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +++++LP RIA P+ RD ++L+V IS+ + LP ++ ++FN
Sbjct: 9 ISDYNYNLPDERIAKFPLPVRDQSKLLVYRNG-----DISETRFTSLPDYVEPGTLMIFN 63
Query: 63 NTKVITAQLNGVR--------FC---------HINRREKEISCTLHMRVSPNSWSVYARP 105
NTKVI A+L+ + FC +N ++ E + L M + W
Sbjct: 64 NTKVIQARLHFRKETGALIEIFCLEPIQPNDYALNFQQTEHAAWLCMIGNLKKWKEGTLT 123
Query: 106 SKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPY 165
++ KG + + G++R + +D + G+ + + G +P+PPY
Sbjct: 124 RRMTVKGQDITLAATRGEARGTSHWVD--------FTWDNPGVTFADILEMFGELPIPPY 175
Query: 166 IARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAG 225
+ R+ D YQT Y+KI+GSVAAPTAGLHFT +L L + G + VTLHVGAG
Sbjct: 176 LNRE--TQESDKETYQTVYSKIKGSVAAPTAGLHFTQRVLDALRAKGADLEEVTLHVGAG 233
Query: 226 TFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET------- 278
TF PVK E+ + H MH+E +I ++ + + G+ ++VGTTS+R LE+
Sbjct: 234 TFKPVKSEEIEGHEMHTE--YISVSKG-SIEKLIAHEGKALAVGTTSVRTLESLYYIGVT 290
Query: 279 ------ATTEDGIINPWSGF------------------------------TNIFITPGYR 302
A D + W + T I I PGY
Sbjct: 291 LSQHPDAQEADLHVRQWQPYETHPTLSTTEALKHILHYMERHRLDALHTSTQIIIAPGYE 350
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
++ V +++NFH P+STLL+LVSAF + K++Y +A+SH +RF SYGD+SLL +
Sbjct: 351 YKVVKRMITNFHQPQSTLLLLVSAFVK-GDWKRIYDYALSHDFRFLSYGDSSLLINE 406
>gi|304382535|ref|ZP_07365030.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
marshii DSM 16973]
gi|304336366|gb|EFM02607.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
marshii DSM 16973]
Length = 406
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 136/412 (33%), Positives = 201/412 (48%), Gaps = 75/412 (18%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++++ LP RIA PV PRD ++L+V I++ LP L +V+N
Sbjct: 10 IADYNYLLPEERIAKYPVTPRDHSKLLVYRHG-----AITEEKFYRLPQLLPQGALMVYN 64
Query: 63 NTKVITAQLNGVRFCHINRRE-KEISCTLHMRVSPN------------SWSVYARPSKVI 109
NTKVI A++ H + +I L ++P +W K
Sbjct: 65 NTKVIQARI------HFRKDTGAQIEVFLLEPLTPADYELMFQSRRRCTWLCLVGNLKKW 118
Query: 110 KKGDILHFFSQDGQS-RLEATVIDKWNTGE-ILLVFSISGIELERQISLVGTIPLPPYIA 167
K+G + S G+ L AT + +G I + + + VG +P+PPY+
Sbjct: 119 KEGTLTRTLSIQGEPFTLTATREEAMRSGHRITFEWDNPRVSFAEILEAVGELPIPPYL- 177
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R D YQT Y+KI+GSVAAPTAGLHFT+++L L + GI+ VTLHVGAGTF
Sbjct: 178 -NRATQESDKQTYQTVYSKIKGSVAAPTAGLHFTNDVLQALDTAGIEREEVTLHVGAGTF 236
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK E+ + H MH+E + T + L K G ++VGTTS+R LE+
Sbjct: 237 KPVKAEEIEGHEMHTEYICVHQETLEKLIMHK---GHAIAVGTTSVRTLESLYYIGLKLK 293
Query: 279 ----ATTEDGIINPWSGF------------------------------TNIFITPGYRFR 304
+ E+ +N W + T I I PGY ++
Sbjct: 294 ANPQLSEEELHVNQWEPYEQEATLTPVEAIIRVLDYLYRNQLKTLHTSTQIIIAPGYEYK 353
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
V +L++NFH P+STLL+LVSAF + +++Y +A+ H +RF SYGD+SLL
Sbjct: 354 IVKMLITNFHQPQSTLLLLVSAFVK-GDWRRIYDYALDHDFRFLSYGDSSLL 404
>gi|150010325|ref|YP_001305068.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Parabacteroides distasonis ATCC 8503]
gi|149938749|gb|ABR45446.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Parabacteroides distasonis ATCC 8503]
Length = 404
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 139/411 (33%), Positives = 205/411 (49%), Gaps = 72/411 (17%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++++++ LP RIA P+ RD ++L++ IS+ + + +L N +VFN
Sbjct: 8 IEDYNYSLPDERIAKFPLPKRDESKLLLYRNG-----EISESIFKHITDYLPQNSLMVFN 62
Query: 63 NTKVITAQL-----NGVR---FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NT+VI A+L G R FC + E + SW+ K K+G +
Sbjct: 63 NTRVIQARLLFQKETGARIEIFC-LEPIEPHDYALIFQETRRCSWTCLVGNLKKWKEGTL 121
Query: 115 LH-FFSQDGQSRLEATVIDK----WNTGEILLVFSISGIELERQISLVGTIPLPPYIARK 169
F +D L A DK +T I ++ + G +P+PPY+ R+
Sbjct: 122 SKTIFIKDEPVVLTA---DKKKSHGDTHLIEFIWDNEAYTFADILDAAGVLPIPPYLHRE 178
Query: 170 RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
+ D YQT Y+KI+GSVAAPTAGLHFT +L+ + + GI VTLHVGAGTF P
Sbjct: 179 --TEKSDLQTYQTVYSKIKGSVAAPTAGLHFTPEVLADIDARGIGREEVTLHVGAGTFKP 236
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET----------- 278
VK + + H MH+E FI + ++ +KS G I++VGTTS+R LE+
Sbjct: 237 VKSDTIEGHEMHTE--FISVRRS-SIERIKSNLGNIIAVGTTSVRTLESLYYMGVILDNN 293
Query: 279 --ATTEDGIINPWSGF-------------------------------TNIFITPGYRFRA 305
AT+ED ++ W + T I I PGY F+
Sbjct: 294 PEATSEDLVVKQWMPYDMNNNRLTAERSLQNILDYLDKHDADTLVTATQIIIAPGYEFKI 353
Query: 306 VDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
V +++NFH PKSTLL+L+SAF K +Y++A+ H +RF SYGD+SLL
Sbjct: 354 VKGIVTNFHQPKSTLLLLISAFVK-GNWKSIYEYALEHDFRFLSYGDSSLL 403
>gi|255690464|ref|ZP_05414139.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides finegoldii DSM 17565]
gi|260623913|gb|EEX46784.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides finegoldii DSM 17565]
Length = 406
Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 134/415 (32%), Positives = 206/415 (49%), Gaps = 81/415 (19%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ E+++ LP RIA P+ RD ++L++ +++ + + LP +L ++FN
Sbjct: 10 ISEYNYPLPDERIAKFPLPVRDQSKLLIYRHG-----EVNEDIFTSLPDYLPKGSLMIFN 64
Query: 63 NTKVITAQLNGVR--------FCH---------INRREKEISCTLHMRVSPNSWSVYARP 105
NTKVI A+L+ + FC +N ++ E + L M + W
Sbjct: 65 NTKVIQARLHFRKETGALIEVFCLEPIQPNDYVLNFQQTEHAAWLCMIGNLKKWKDGELK 124
Query: 106 SKVIKKGDILHFFSQDGQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPP 164
++ KG + + G+ R + +D WN E+ + + I + + G +P+PP
Sbjct: 125 REMTVKGFPITLTATRGECRGTSHWVDFTWNNAEV----TFADI-----LEVFGELPIPP 175
Query: 165 YIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
Y+ R + D YQT Y+KI+GSVAAPTAGLHFT +L L GI++ +TLHVGA
Sbjct: 176 YLNRN--TEESDKETYQTVYSKIKGSVAAPTAGLHFTPQVLDALQEKGIELEELTLHVGA 233
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET------ 278
GTF PVK E+ + H MH+E ++ T + L G V+VGTTS+R LE+
Sbjct: 234 GTFKPVKSEEIEGHEMHTEYISVNRSTIKKL---IDHDGCAVAVGTTSVRTLESLYHIGV 290
Query: 279 -------ATTEDGIINPWSGF------------------------------TNIFITPGY 301
AT E+ + W + T I I PGY
Sbjct: 291 TLAENPDATEEELHVRQWQPYEKYDQIPPVVALQKILGYLDRHGMETLHTSTQIIIAPGY 350
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
++ V +++NFH P+STLL+LVSAF + +Y +A+SH +RF SYGD+SLL
Sbjct: 351 DYKIVKAMVTNFHQPQSTLLLLVSAFVK-GNWRTIYDYALSHDFRFLSYGDSSLL 404
>gi|189463863|ref|ZP_03012648.1| hypothetical protein BACINT_00196 [Bacteroides intestinalis DSM
17393]
gi|189438813|gb|EDV07798.1| hypothetical protein BACINT_00196 [Bacteroides intestinalis DSM
17393]
Length = 409
Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 136/418 (32%), Positives = 205/418 (49%), Gaps = 84/418 (20%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ EF++ LP RIA P+ RD ++L+V +S+ + LP++L + ++FN
Sbjct: 10 ISEFNYPLPDERIAKFPLPVRDQSKLLVYRHG-----EVSEDRFTSLPSYLPAGSLMIFN 64
Query: 63 NTKVITAQLNGVR--------FCH---------INRREKEISCTLHMRVSPNSWSVYARP 105
NTKVI A+L+ + FC +N ++ E + L M + W
Sbjct: 65 NTKVIQARLHFRKDTGALIEVFCLEPIEPNDYVLNFQQTEHAAWLCMIGNLKKWKEGTLK 124
Query: 106 SKVIKKGDILHFFSQDGQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPP 164
++ KG + + G+ + +D +WN EI + + I + + G +P+PP
Sbjct: 125 REMTVKGQPITLTATRGECHGTSHWVDFRWNNPEI----TFADI-----LEVFGELPIPP 175
Query: 165 YIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
Y+ R D YQT Y+KI+GSVAAPTAGLHFT +L L GI + +TLHVGA
Sbjct: 176 YL--NRDTQESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALKEKGIDLEELTLHVGA 233
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET------ 278
GTF PVK E+ + H MH+E + T + L + G+ ++VGTTS+R LE+
Sbjct: 234 GTFKPVKSEEIEGHEMHTEYISVSRGTIEKL---IAHDGKAIAVGTTSVRTLESLYHIGV 290
Query: 279 -------ATTEDGIINPWSGF---------------------------------TNIFIT 298
AT E+ + W + T I I
Sbjct: 291 TLLKNPDATEEELHVRQWQPYETAEEAANITSVKALQAILDYLNHHKMETLHTSTQIIIA 350
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY ++ V +++NFH P+STLL+LVSAF +K+Y A+ H +RF SYGD+SLL
Sbjct: 351 PGYDYKIVCAMVTNFHQPQSTLLLLVSAFVK-GNWRKIYDFALGHDFRFLSYGDSSLL 407
>gi|8247949|sp|O51053|QUEA_BORBU RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
Length = 343
Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 133/365 (36%), Positives = 196/365 (53%), Gaps = 35/365 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF F+L S I P R S+RL+V+ P L + + V+++ ++NSN +
Sbjct: 1 MKTKEFHFNLSHSLIEQYPSEKRGSSRLIVLDPQLQK--IYHKNSVNNILKYINSN---I 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHM----RVSPNSWSVYARPSKVIKKGDILH 116
FNN+K +++ E E+S + R+ N ++ SK G+
Sbjct: 56 FNNSKARKSRIYA---------ESEMSSNVEFLILDRIDTNLFTALVSKSKKQIIGNFYK 106
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIE--LERQISLVGTIPLPPYIARKRPIDA 174
F +G L ++ K N+ E++L F+ + E E+ +PLP YI KR D
Sbjct: 107 F--PEG---LMDEILSK-NSSEVVLKFNNNVGEDYFEKHC----FVPLPSYI--KRDYDK 154
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D YQT Y+K GS A+ TAGLHF+ +L S + I+ F+TLHVGAGTF+PV+ +
Sbjct: 155 IDEDRYQTIYSKYVGSTASATAGLHFSRDLFSAFENNNIEYDFITLHVGAGTFLPVRSKK 214
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFT 293
++H MH E I A L + K G RI+S+ TT+LR LE++ + T
Sbjct: 215 VEEHNMHFETFLIKDFVAVRLQNAKLLGKRILSIVTTTLRALESSYDNNLKKFKTGQQST 274
Query: 294 NIFITPG--YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
N+FI PG Y F+ VD+L +NFH P+STLLMLVS+F G + Y+ AI+ Y+F+SYG
Sbjct: 275 NLFIYPGKNYCFKFVDMLFTNFHTPQSTLLMLVSSFAGKDFVFSFYEEAINKGYKFFSYG 334
Query: 352 DTSLL 356
D L+
Sbjct: 335 DAMLI 339
>gi|258647281|ref|ZP_05734750.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
tannerae ATCC 51259]
gi|260852936|gb|EEX72805.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
tannerae ATCC 51259]
Length = 409
Score = 189 bits (481), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 139/417 (33%), Positives = 206/417 (49%), Gaps = 77/417 (18%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +K++++ LP RIA PV PRD ++L++ +S+ +LP +L +V
Sbjct: 7 IQIKDYNYTLPEDRIAKYPVAPRDHSKLLLYRDGR-----VSEDSFYNLPTYLKPGALMV 61
Query: 61 FNNTKVITAQLNGVR--------FC---HINRREKEISCTLHMRVSPNSWSVYARPSKVI 109
FNNTKVI A+L+ + FC H ++ S RV+ W+ K
Sbjct: 62 FNNTKVIFARLHFQKATGALIEIFCLEPHTPADYQQ-SFAATRRVT---WTCLVGNMKKW 117
Query: 110 KKGDILHFFSQDGQSRLEATVIDKWNTG---EILLVFSISGIELERQISLVGTIPLPPYI 166
K+G L + G L T K G EI + + + +G +P+PPY+
Sbjct: 118 KEGR-LERTVKVGDRELLLTAEHKGPAGTGFEIAFDWGDDAVSFSEVLDAIGELPIPPYL 176
Query: 167 ARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGT 226
R+ + D +YQT Y+KI+GSVAAPTAGLHFT ++L RL GI +TLHVGAGT
Sbjct: 177 NRQ--TEQSDLNNYQTVYSKIEGSVAAPTAGLHFTDDVLRRLDEAGIVREEITLHVGAGT 234
Query: 227 FMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-------- 278
F PVK E+ + H MH+E +I A + Q + + + ++VGTTS+R LE+
Sbjct: 235 FKPVKSEEIEGHTMHAE--WI-AVSRQNIEHLLAHDCSCIAVGTTSVRTLESLYYIGVLI 291
Query: 279 -----ATTEDGIINPWSGF----------------------------------TNIFITP 299
ED + W + T I I P
Sbjct: 292 HRNPHVAPEDLHVPQWLPYEYETSTEEKLTPEAALREILAYLDRNRMSVLHTATQIIIAP 351
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY ++ V +++NFH P+STLL+LVSAF G + +Y +A++H +RF SYGD+SLL
Sbjct: 352 GYTYKIVKTMVTNFHQPQSTLLLLVSAFVG-GNWRTIYDYALAHDFRFLSYGDSSLL 407
>gi|126695763|ref|YP_001090649.1| queuosine biosynthesis protein [Prochlorococcus marinus str. MIT
9301]
gi|229892795|sp|A3PBC3|QUEA_PROM0 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|126542806|gb|ABO17048.1| Queuosine biosynthesis protein [Prochlorococcus marinus str. MIT
9301]
Length = 374
Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 122/358 (34%), Positives = 187/358 (52%), Gaps = 22/358 (6%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
+D+ L PS IA +P R +RLM+V + +++ +L D ++ NNTK
Sbjct: 17 YDYLLDPSLIASKPSAIRHESRLMIVRNSFLEEDCLTNKFTKNLLDEFREGDLVIVNNTK 76
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNS----WSVYARPSKVIKKGDILHFFSQD 121
V+ A+L + E E + + V S W A+P+K +K L S
Sbjct: 77 VMKARL---------KVELENKTLVELLVLERSHECIWLCLAKPAKKLKINRKLKLKSPL 127
Query: 122 GQS-RLEATVIDKWNTGE-ILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYV 178
Q L +D+ G I +I+ + + + G IPLPPYI ++
Sbjct: 128 AQDINLIVDGVDEETGGRFIKFPENITCLNSMNELLDKYGEIPLPPYIKNSEE-ESFHEK 186
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YA G+VAAPTAGLH + +L+S L G+ + +TLHVG GTF P+ ED +
Sbjct: 187 SYQTEYATNPGAVAAPTAGLHLSKSLISNLKKKGVIILPITLHVGYGTFKPIDQEDLSNL 246
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN---PWSGFTNI 295
+H E ++ + + +K +I+++GTTS+R LE+ + + IN P + + ++
Sbjct: 247 KLHKEWVSVNKEVVEEIKRIKKTDRKIIAIGTTSVRALESCYSHE--INDFIPIAKYVDL 304
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
I PGY F+ VD L++NFHLPKS+LL+LVSA G E +Y+ AI +RF+SYGD
Sbjct: 305 VIKPGYEFKVVDGLLTNFHLPKSSLLLLVSAMIGRERLLDLYKKAIKEKFRFFSYGDA 362
>gi|193214235|ref|YP_001995434.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Chloroherpeton thalassium ATCC 35110]
gi|193087712|gb|ACF12987.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Chloroherpeton thalassium ATCC 35110]
Length = 339
Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 130/360 (36%), Positives = 185/360 (51%), Gaps = 24/360 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD+ LP +IA P R + +L+ ++ + L L AFL D +V
Sbjct: 1 MNVSDFDYTLPDEQIAKYPPKERGTTKLLALNRKTGE---VQHSLYRSLDAFLEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L + + L P +Y IK G+ L +
Sbjct: 58 LNNTKVIKARLQANKPTGASVE----LLLLEKHEGPQQIVMYGGK---IKAGNTL-LVGE 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D E V + G L + + L + G +P+PPY+ RK + D + Y
Sbjct: 110 D-----EVLVEEILGNG---LAKVSAAVPLLSLVEKYGNVPIPPYLNRK--AEKSDEMRY 159
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +AK QGSVAAPTA L+FT +L +L G+++ F+TLHVG GTFMP++ E H M
Sbjct: 160 QTVFAKEQGSVAAPTASLNFTESLEKKLKEKGVQLAFLTLHVGLGTFMPIRTETLSAHEM 219
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINP--WSGFTNIFIT 298
H E I TA A+ K+ R+V++GTT R +E A+ P +G +IFI
Sbjct: 220 HREFYHISHETAAAIRLAKAEKRRVVALGTTVTRAIEHASARLLAHEPAELAGEADIFIY 279
Query: 299 P-GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
P GY F+ VD L++NFH P+ST+LML +AF G K Y+ A+ + Y F SYGD+ +F
Sbjct: 280 PGGYEFQIVDALLTNFHAPRSTVLMLAAAFAGAAHLKAAYEAALQNDYHFLSYGDSMFIF 339
>gi|294775846|ref|ZP_06741346.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides vulgatus PC510]
gi|294450306|gb|EFG18806.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides vulgatus PC510]
Length = 405
Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 137/421 (32%), Positives = 203/421 (48%), Gaps = 89/421 (21%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + EF++ LP RIA P+ RD ++L+V +S+ + + LP +L S + ++
Sbjct: 7 IKISEFNYPLPDERIAKFPLATRDQSKLLVYRHG-----EVSEDIFTSLPHYLESGELMI 61
Query: 61 FNNTKVITAQLNGVRFCHINRREK----EISCTLHMRVSPN------------SWSVYAR 104
FNNTKVI A+L+ R+E E+ C V PN SW
Sbjct: 62 FNNTKVIQARLHF-------RKETGALIEVFCL--EPVQPNDYVLNFQQTRQCSWLCMIG 112
Query: 105 PSKVIKKGDILHFFSQDGQ------SRLEATVIDKWNTGEILLVFSISGIELERQISLVG 158
K K+G + + G+ +R E W I + I + + G
Sbjct: 113 NLKKWKEGTLSRIVNVKGKQIVLSATRGECKGTSHW----IDFSWDDDTITFADLLEVAG 168
Query: 159 TIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFV 218
+P+PPY+ R+ D YQT Y+KI+GSVAAPTAGLHFT +L+ L GI +
Sbjct: 169 ELPIPPYLNRE--TQESDKETYQTVYSKIKGSVAAPTAGLHFTERVLAALDERGIDREEL 226
Query: 219 TLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET 278
TLHVGAGTF PVK E+ + H MH+E + T + L + G+ ++VGTTS+R LE+
Sbjct: 227 TLHVGAGTFKPVKSEEIEGHEMHTEYISVSKHTIEKL---IAHNGKAIAVGTTSVRTLES 283
Query: 279 -------------ATTEDGIINPWSGF------------------------------TNI 295
AT ++ + W + T I
Sbjct: 284 LYYIGVLISHNPDATQDELHVQQWMPYEDKNDLTPVEALQQILDYLNRHEMEALHSSTQI 343
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
I PGY ++ V +++NFH P+STLL+LVSAF +++Y +A+ H +RF SYGD+SL
Sbjct: 344 IIAPGYTYKIVKKMVTNFHQPQSTLLLLVSAFVK-GNWRRIYDYALGHDFRFLSYGDSSL 402
Query: 356 L 356
L
Sbjct: 403 L 403
>gi|224026756|ref|ZP_03645122.1| hypothetical protein BACCOPRO_03513 [Bacteroides coprophilus DSM
18228]
gi|224019992|gb|EEF77990.1| hypothetical protein BACCOPRO_03513 [Bacteroides coprophilus DSM
18228]
Length = 405
Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 131/415 (31%), Positives = 207/415 (49%), Gaps = 81/415 (19%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++++ LP RIA P+ RD ++L+V +S+ + LP +L + + ++FN
Sbjct: 9 ISDYNYPLPDERIAKFPLPVRDQSKLLVYRHG-----EVSETRFTSLPDYLEAGELMIFN 63
Query: 63 NTKVITAQLNGVR--------FCH---------INRREKEISCTLHMRVSPNSWSVYARP 105
NTKVI A+L+ + FC +N ++ + L M + W +
Sbjct: 64 NTKVIQARLHFRKETGALIEIFCLEPIQPNDYVLNFQQTSHAAWLCMIGNLKKWKEGSLH 123
Query: 106 SKVIKKGDILHFFSQDGQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPP 164
++ KG + + G+ R + +D W+ EI + + I + + G +P+PP
Sbjct: 124 KEMNVKGHTITLTATRGECRGTSHWVDFTWDNPEI----TFADI-----LEVFGELPIPP 174
Query: 165 YIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
Y+ R+ D YQT Y+KI+GSVAAPTAGLHFT +L L G+ + VTLHVGA
Sbjct: 175 YLNRE--TQESDKETYQTVYSKIKGSVAAPTAGLHFTERVLQALRDKGVDLEEVTLHVGA 232
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET------ 278
GTF PVK E+ + H MH+E ++ Q + + + GG+ ++VGTTS+R LE+
Sbjct: 233 GTFKPVKSEEIEGHEMHTEYISVN---RQTIEKLIAHGGKAIAVGTTSVRTLESLYYIGV 289
Query: 279 -------ATTEDGIINPWSGF------------------------------TNIFITPGY 301
A E+ + W + T I I PGY
Sbjct: 290 TIASHPDAGQEELHVRQWQPYETHPTMTTVESLQQILDYMKRHELEALHTSTQIIIAPGY 349
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ V +++NFH P+STLL+LVSAF + +Y +A++H +RF SYGD+SLL
Sbjct: 350 TYHIVQKMVTNFHQPQSTLLLLVSAFVK-GNWRTIYDYALAHDFRFLSYGDSSLL 403
>gi|149193933|ref|ZP_01871031.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Caminibacter mediatlanticus TB-2]
gi|149135886|gb|EDM24364.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Caminibacter mediatlanticus TB-2]
Length = 340
Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 134/368 (36%), Positives = 195/368 (52%), Gaps = 45/368 (12%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
++V +D+DLP IA P+ PRD A+L+V + + D + +
Sbjct: 5 LLVSNYDYDLPEELIAKYPITPRDEAKLLVYDRKKDKIIHTKFKNILDFVG----DKRFI 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHM-RVSPNSWSVYARPSKVIKKGDILHF-- 117
FN+TKVI A++ G ++E L + R N + VY R +K+G L F
Sbjct: 61 FNDTKVIKARIFG-------KKESGGRVELLLNRPFNNDFLVYIRGK--VKRGTKLFFDR 111
Query: 118 --------FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARK 169
+DG ++ + ++ +IL + + I + +G IPLPPYI RK
Sbjct: 112 GLVAEVKELLEDGSRVVDFKLRMEYGEWKILDFYELVNI-----LEEIGHIPLPPYIKRK 166
Query: 170 -RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFM 228
ID ++Y QT +AK +G+VAAPTA LHFT NLL ++ K ++TLHVGAGTF
Sbjct: 167 DEEIDEKEY---QTIFAKKEGAVAAPTASLHFTKNLLDKIE----KKAYLTLHVGAGTFK 219
Query: 229 PVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINP 288
PV+VED H MHSE I TA+ L+S IV+VGTT+ R +E +
Sbjct: 220 PVEVEDIRFHKMHSEFFEIPKNTAEILDS----NEEIVAVGTTATRTIEYYARTKKL--- 272
Query: 289 WSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
G +F+ P V+ L++NFHLPKSTL+MLV++F G ++T ++Y+ A YRFY
Sbjct: 273 -KGECGLFLNPLNPPIRVNHLITNFHLPKSTLIMLVASFIGRKKTLEIYEIAKKEKYRFY 331
Query: 349 SYGDTSLL 356
SYGD L+
Sbjct: 332 SYGDAMLI 339
>gi|332177835|gb|AEE13525.1| Queuosine biosynthesis protein [Porphyromonas asaccharolytica DSM
20707]
Length = 425
Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 139/445 (31%), Positives = 204/445 (45%), Gaps = 124/445 (27%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+ LP RIA P+ RD RL++ + DH ++LP L + ++ N
Sbjct: 15 INDYDYPLPDERIAEHPLAERDQCRLLMSDATGR----LEDHTFAELPQLLPPHALLIRN 70
Query: 63 NTKVITAQL-----NGVRF--------------------------CHIN-----RREKEI 86
NT+VI A++ G R C + R E+ I
Sbjct: 71 NTRVIKARIFFVKATGARIEILCLDPYRPVSYEESLSSLGSCSWHCLVGNSKKWRPEQTI 130
Query: 87 SCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSIS 146
SCTL + ++ + S+ ++ D++ F D GEIL
Sbjct: 131 SCTLPL---AGGQTITLQASRAVETPDVVTFSWSDETKSF----------GEIL------ 171
Query: 147 GIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLS 206
L G +P+PPY+ R+ ++ D DYQT YA+I+GSVAAPTAGLHFT L
Sbjct: 172 --------ELCGQLPIPPYLNRE--TESSDLTDYQTVYARIEGSVAAPTAGLHFTPELDD 221
Query: 207 RLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIV 266
RL++ G ++ +TLHVGAGTF+PVK +H MHSE + PTA ++ V
Sbjct: 222 RLLAEGHRITELTLHVGAGTFLPVKGRQVAEHQMHSE--YCSVPTATLETLLEHIDSPFV 279
Query: 267 SVGTTSLRLLET----------ATTEDGII------NPWSGF------------------ 292
+GTTS+R LE+ A E G + + W +
Sbjct: 280 PIGTTSVRTLESLYWYAVALQQAAQEGGDVAEPFHLDQWYSYRMRQSCGAALPSRREALE 339
Query: 293 -----------------TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKK 335
T + I PGY++ VDIL++NFH PKSTLL+LVSA G +
Sbjct: 340 ILLCYARHRGLGRLTFSTALLIAPGYQYHMVDILVTNFHQPKSTLLLLVSALIG-PRWRT 398
Query: 336 MYQHAISHA-YRFYSYGDTSLLFQK 359
+Y+HA++ YRF SYGD LL+++
Sbjct: 399 LYEHALADVQYRFLSYGDACLLYRQ 423
>gi|315637225|ref|ZP_07892445.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Arcobacter
butzleri JV22]
gi|315478497|gb|EFU69210.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Arcobacter
butzleri JV22]
Length = 340
Score = 189 bits (479), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 129/356 (36%), Positives = 196/356 (55%), Gaps = 31/356 (8%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
+D++LP ++IA PV P DSA+L++ N S +I D+ FL ++ +I N+TK
Sbjct: 10 YDYNLPKNQIATYPVTPADSAKLLIF--NRSTNTIIHSTF-KDILEFLPNDLSIFLNDTK 66
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSR 125
VI A++ GV+ +I L+ + + + V R ++ G L F
Sbjct: 67 VIKARIFGVK-----DSGGQIELLLNKPLFMDRYLVMIRGK--VRVGTKLLF-----DEN 114
Query: 126 LEATVIDKWNTGEILLVF-----SISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A V + G ++ F + + L ++ +G +PLPPY+ R+ + +D +Y
Sbjct: 115 LSAIVEEVNEDGSRIVEFFQDEKKLDFLSLVEILNKIGHLPLPPYMNRED--EKQDEQNY 172
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +AK G+VAAPTA LHFT LL L + ++TLHVGAGTF PV VED H M
Sbjct: 173 QTLFAKNYGAVAAPTASLHFTPELLKNLEE-KYGLNYLTLHVGAGTFKPVDVEDILSHPM 231
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I + L+ + ++++VGTT R +E + I G ++F+ P
Sbjct: 232 HSEYFEIGIDAKKNLD----KANKVLAVGTTVTRTIEYYARTNKI----QGECDLFLNPA 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ VD L++NFHLPKSTL+MLV++F G+E+T ++Y+ AI YRFYSYGD L+
Sbjct: 284 NKPIKVDYLLTNFHLPKSTLIMLVASFIGLEKTLEIYETAIKENYRFYSYGDGMLI 339
>gi|212690635|ref|ZP_03298763.1| hypothetical protein BACDOR_00122 [Bacteroides dorei DSM 17855]
gi|237725170|ref|ZP_04555651.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. D4]
gi|265754309|ref|ZP_06089498.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 3_1_33FAA]
gi|212666735|gb|EEB27307.1| hypothetical protein BACDOR_00122 [Bacteroides dorei DSM 17855]
gi|229436436|gb|EEO46513.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
dorei 5_1_36/D4]
gi|263235018|gb|EEZ20573.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 3_1_33FAA]
Length = 405
Score = 189 bits (479), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 136/421 (32%), Positives = 202/421 (47%), Gaps = 89/421 (21%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + EF++ LP RIA P+ RD ++L+V +++ + + LP +L S + ++
Sbjct: 7 IKISEFNYPLPDERIAKFPLATRDQSKLLVYRHG-----EVNEDVFTSLPQYLESGELMI 61
Query: 61 FNNTKVITAQLNGVRFCHINRREK----EISCTLHMRVSPN------------SWSVYAR 104
FNNTKVI A+L+ R+E E+ C + PN SW
Sbjct: 62 FNNTKVIQARLHF-------RKETGALIEVFCL--EPIQPNDYVLSFQQTRRCSWLCMIG 112
Query: 105 PSKVIKKGDILHFFSQDGQ------SRLEATVIDKWNTGEILLVFSISGIELERQISLVG 158
K KKG + G+ +R E W I + I + ++G
Sbjct: 113 NLKKWKKGTLSRVVDVKGKQIVLSATRGECRGTSHW----IDFSWDDDSITFADLLEVIG 168
Query: 159 TIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFV 218
+P+PPY+ R+ D YQT Y+KI+GSVAAPTAGLHFT +L+ L GI +
Sbjct: 169 ELPIPPYLNRE--TQESDKETYQTVYSKIKGSVAAPTAGLHFTERVLAALDERGIDREEL 226
Query: 219 TLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET 278
TLHVGAGTF PVK E+ + H MH+E + T + L + G+ ++VGTTS+R LE+
Sbjct: 227 TLHVGAGTFKPVKSEEIEGHEMHTEYISVSKHTIEKL---IAHNGKAIAVGTTSVRTLES 283
Query: 279 -------------ATTEDGIINPWSGF------------------------------TNI 295
A + + W + T I
Sbjct: 284 LYYIGVLIHHNPDAAQNELHVQQWMPYEDKNELTPVEALQQILDYLHRHEMEALHSSTQI 343
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
I PGY+++ V +++NFH P+STLL+LVSAF +K+Y +A+ H +RF SYGD+SL
Sbjct: 344 IIAPGYQYKIVRKMVTNFHQPQSTLLLLVSAFVR-GNWRKIYDYALEHDFRFLSYGDSSL 402
Query: 356 L 356
L
Sbjct: 403 L 403
>gi|315586376|gb|ADU40757.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori 35A]
Length = 345
Score = 188 bits (478), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 126/359 (35%), Positives = 196/359 (54%), Gaps = 25/359 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D+DLP IA P+ P++ A+L+V I+ + F N +V N
Sbjct: 6 LESYDYDLPKELIANYPILPKEKAKLLVYERRSQK---ITHTTFEHVLDFFPKNALVVLN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKVI A+L G + + + E+ R N+ ++ K IK GD + F
Sbjct: 63 DTKVIKARLFGSKHAFLPSKTTEV---FFHRFFKNNTALTQIKGK-IKVGDKIFF----- 113
Query: 123 QSRLEATVIDKWNTGEILLVF-----SISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+ A V++ + G+ L+ F ++ + + + G +PLPPYI KR ++ D
Sbjct: 114 DANYYAEVLELLHNGQRLIAFYNNKTPLNQASILKLLEQYGHMPLPPYI--KRADESLDA 171
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
+YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+ +D +
Sbjct: 172 HEYQSVFAKHMGAVAAPTASLHFSQNTLEKLLK-DFKHAFLTLHVGAGTFLGVETKDIRE 230
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H +H+E+ I + + L + I+ VGTT+LR +E + N + +IF+
Sbjct: 231 HQIHTEVLRIPKKSQEIL----QKSQEILCVGTTALRSVEYFKRLENP-NQEAFECDIFL 285
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
V+ L++NFHLPKS+LLMLVSA G+E+TK++YQ AI YRFYSYGD L+
Sbjct: 286 HLANPILHVNYLLTNFHLPKSSLLMLVSAMVGLEKTKEIYQIAIEKKYRFYSYGDGMLI 344
>gi|157737500|ref|YP_001490183.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Arcobacter
butzleri RM4018]
gi|167016402|sp|A8EU90|QUEA_ARCB4 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|157699354|gb|ABV67514.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Arcobacter
butzleri RM4018]
Length = 340
Score = 188 bits (478), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 129/356 (36%), Positives = 195/356 (54%), Gaps = 31/356 (8%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
+D++LP ++IA PV P DSA+L++ N S +I D+ FL ++ +I N+TK
Sbjct: 10 YDYNLPKNQIATYPVTPADSAKLLIF--NRSTNTIIHSTF-KDILEFLPNDLSIFLNDTK 66
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSR 125
VI A++ GV+ +I L+ + + + V R ++ G L F
Sbjct: 67 VIKARIFGVK-----DSGGQIELLLNKPLFMDRYLVMIRGK--VRVGTKLLF-----DEN 114
Query: 126 LEATVIDKWNTGEILLVF-----SISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A V + G ++ F + + L ++ +G +PLPPY+ R+ + +D +Y
Sbjct: 115 LSAIVEEVDEDGSRIVEFFQDEKKLDFLSLVEILNKIGHLPLPPYMNRED--EKQDEQNY 172
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +AK G+VAAPTA LHFT LL L + ++TLHVGAGTF PV VED H M
Sbjct: 173 QTLFAKNYGAVAAPTASLHFTPELLKNLEE-KYGLNYLTLHVGAGTFKPVDVEDILSHPM 231
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I + L+ + ++++VGTT R +E N G ++F+ P
Sbjct: 232 HSEYFEIGIDAKKNLD----KANKVLAVGTTVTRTIEYYAR----TNKIQGECDLFLNPA 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ VD L++NFHLPKSTL+MLV++F G+E+T ++Y+ AI YRFYSYGD L+
Sbjct: 284 NKPIKVDYLLTNFHLPKSTLIMLVASFIGLEKTLEIYETAIKENYRFYSYGDGMLI 339
>gi|325854969|ref|ZP_08171685.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella denticola CRIS 18C-A]
gi|327313347|ref|YP_004328784.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella denticola F0289]
gi|325483947|gb|EGC86887.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella denticola CRIS 18C-A]
gi|326946042|gb|AEA21927.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella denticola F0289]
Length = 394
Score = 188 bits (478), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 123/400 (30%), Positives = 196/400 (49%), Gaps = 49/400 (12%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVHPNLSCPLVIS 42
M + +F F+LP ++AL P V RD RLMV+H +
Sbjct: 1 MKLSQFKFNLPKEQVALYPHSSDRVLTRSDGSTQTFTVTRRDEGRLMVLHRTSGKIDMFK 60
Query: 43 DHL-----------VSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLH 91
+ D+ ++ + DA +FN+TKV A+L G + + + +I L
Sbjct: 61 GEVKGEPKETDFIRFKDVLSYFDEGDAFIFNDTKVFPARLYGTK----EKTDAKIEVFLL 116
Query: 92 MRVSPNS--WSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNT-GEIL-LVFSISG 147
++ W V P++ I+ G+ L FF + G + A VID + G L ++
Sbjct: 117 RELNQEMRLWDVLVEPARKIRIGNKL-FFDESGT--MVAEVIDNTTSRGRTLRFLYDCPH 173
Query: 148 IELERQISLVGTIPLPPYIARKRPID---------ARDYVDYQTTYAKIQGSVAAPTAGL 198
E +R++ +G PLP YI RP + A D ++Q+ +AK +G+V+AP +
Sbjct: 174 DEFKRELYALGEAPLPRYIIDNRPKEKGEEFAHATADDMENFQSVFAKNEGAVSAPGTNI 233
Query: 199 HFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSV 258
HF+ +++ + GIK F+TLH G GTF ++VED H M SE I+A + NS
Sbjct: 234 HFSEHMMKMMDIRGIKKAFITLHCGLGTFHDIEVEDLTKHKMDSEEMHINADACRIANSA 293
Query: 259 KSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKS 318
K G + +VG + ++ ETA DG++ + G+TN FI P Y F D ++ NF+ P S
Sbjct: 294 KQAGHHLCAVGASVVKATETAVGTDGMLKEYDGWTNEFIFPPYNFGFADSMLVNFYHPYS 353
Query: 319 TLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
TLLM +AF G + + Y A+ + Y F +GD+ L+
Sbjct: 354 TLLMETAAFGGYDLVMEAYDKAVKNGYMFGCFGDSLLILN 393
>gi|187917904|ref|YP_001883467.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
hermsii DAH]
gi|119860752|gb|AAX16547.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
hermsii DAH]
Length = 348
Score = 188 bits (478), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 129/366 (35%), Positives = 191/366 (52%), Gaps = 35/366 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF FDLP + IA P R +RLMV+ + + + ++D+ +++SN +V
Sbjct: 4 MDTKEFYFDLPHNLIAQYPSEKRGLSRLMVL--DSGKQKIYHNDSINDIFKYIDSNTFLV 61
Query: 61 FNNTKVITAQL-------NGVRFCHINRREKEISCTLHMRVSPNSWS-VYARPSKVIKKG 112
FN+++V +++ V ++R + +L + S VY P ++
Sbjct: 62 FNDSRVRKSRIYAKTDHGGSVEVLILDRLTGDTFTSLISKAKKQSIGRVYTLPQGLL--- 118
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
A +I K + E L F+ E G IPLPPYI KR
Sbjct: 119 ---------------AQIISK-SGNEFTLKFN--KCVDESYFEQHGLIPLPPYI--KRNY 158
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D D Y+T Y+K GS A+ TAGLHF+ L S+L I+ F+TLHVG GTF+PV+
Sbjct: 159 DREDEDRYRTIYSKYIGSSASATAGLHFSEELFSKLDEKNIEYDFITLHVGLGTFLPVRT 218
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+ ++H MH E I A L K+ G +I++VGTT+LR LE+A + +
Sbjct: 219 KTIEEHKMHFESFSIKDSVALRLEEAKALGKKILAVGTTTLRALESAYYKQRGLIRGDQK 278
Query: 293 TNIFITP--GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
TN+FI P GY F+ +D+L +NFH P+STLLMLVS+F G + Y+ A+ Y+F+SY
Sbjct: 279 TNLFIYPGKGYEFKFIDMLFTNFHTPESTLLMLVSSFGGKDFVFTAYREAVKMNYKFFSY 338
Query: 351 GDTSLL 356
GD +L
Sbjct: 339 GDATLF 344
>gi|262382395|ref|ZP_06075532.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 2_1_33B]
gi|262295273|gb|EEY83204.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 2_1_33B]
Length = 413
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 138/411 (33%), Positives = 205/411 (49%), Gaps = 70/411 (17%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++++++ LP RIA P+ RD ++L++ IS+ + + +L N +VFN
Sbjct: 17 IEDYNYSLPDERIAKFPLPKRDESKLLLYRNE-----EISESIFKHITDYLPQNTLMVFN 71
Query: 63 NTKVITAQL-----NGVR---FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NT+VI A+L G R FC + E + SW+ K K+G +
Sbjct: 72 NTRVIQARLLFQKETGARIEIFC-LEPIEPHDYALIFQETRRCSWTCLVGNLKKWKEGTL 130
Query: 115 LH-FFSQDGQSRLEATVIDKWNTGEILLV---FSISGIELERQISLVGTIPLPPYIARKR 170
F +D L A K + G+ L+ + + G +P+PPY+ R+
Sbjct: 131 SKTIFIKDQPVVLTAD--KKKSHGDTHLIEFTWDNETYTFADILDAAGVLPIPPYLHRE- 187
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
+ D YQT Y+KI+GSVAAPTAGLHFT +L+ + + GI VTLHVGAGTF PV
Sbjct: 188 -TEKSDLQTYQTVYSKIKGSVAAPTAGLHFTPEVLADIDARGIGREEVTLHVGAGTFKPV 246
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET------------ 278
K + + H MH+E FI + ++ +KS G I++VGTTS+R LE+
Sbjct: 247 KSDTIEGHEMHTE--FISVRRS-SIERIKSNLGNIIAVGTTSVRTLESLYYMGVILDNNP 303
Query: 279 -ATTEDGIINPWSGF-------------------------------TNIFITPGYRFRAV 306
AT+ED ++ W + T I I PGY F+ V
Sbjct: 304 EATSEDLVVKQWMPYDTNNNRLTAERSLQNILDYLDKHDADTLVTATQIIIAPGYEFKIV 363
Query: 307 DILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+++NFH PKSTLL+L+SAF K +Y++A+ H +RF SYGD+SLL
Sbjct: 364 KGIVTNFHQPKSTLLLLISAFVK-GNWKSIYEYALEHDFRFLSYGDSSLLL 413
>gi|301308401|ref|ZP_07214355.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 20_3]
gi|300833871|gb|EFK64487.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 20_3]
Length = 404
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 138/411 (33%), Positives = 205/411 (49%), Gaps = 70/411 (17%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++++++ LP RIA P+ RD ++L++ IS+ + + +L N +VFN
Sbjct: 8 IEDYNYSLPDERIAKFPLPKRDESKLLLYRNG-----EISESIFKHITDYLPQNTLMVFN 62
Query: 63 NTKVITAQL-----NGVR---FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NT+VI A+L G R FC + E + SW+ K K+G +
Sbjct: 63 NTRVIQARLLFQKETGARIEIFC-LEPIEPHDYALIFQETRRCSWTCLVGNLKKWKEGTL 121
Query: 115 LH-FFSQDGQSRLEATVIDKWNTGEILLV---FSISGIELERQISLVGTIPLPPYIARKR 170
F +D L A K + G+ L+ + + G +P+PPY+ R+
Sbjct: 122 SKTIFIKDQPVVLTAD--KKKSHGDTHLIEFTWDNETYTFADILDAAGVLPIPPYLHRE- 178
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
+ D YQT Y+KI+GSVAAPTAGLHFT +L+ + + GI VTLHVGAGTF PV
Sbjct: 179 -TEKSDLQTYQTVYSKIKGSVAAPTAGLHFTPEVLADIDARGIGREEVTLHVGAGTFKPV 237
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET------------ 278
K + + H MH+E FI + ++ +KS G I++VGTTS+R LE+
Sbjct: 238 KSDTIEGHEMHTE--FISVRRS-SIERIKSNLGNIIAVGTTSVRTLESLYYMGVILDNNP 294
Query: 279 -ATTEDGIINPWSGF-------------------------------TNIFITPGYRFRAV 306
AT+ED ++ W + T I I PGY F+ V
Sbjct: 295 EATSEDLVVKQWMPYDTNNNRLTAERSLQNILNYLDKHDADTLVTATQIIIAPGYEFKIV 354
Query: 307 DILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+++NFH PKSTLL+L+SAF K +Y++A+ H +RF SYGD+SLL
Sbjct: 355 KGIVTNFHQPKSTLLLLISAFVK-GNWKSIYEYALEHDFRFLSYGDSSLLL 404
>gi|254884703|ref|ZP_05257413.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 4_3_47FAA]
gi|319642373|ref|ZP_07997027.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 3_1_40A]
gi|254837496|gb|EET17805.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 4_3_47FAA]
gi|317385988|gb|EFV66913.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 3_1_40A]
Length = 405
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 137/421 (32%), Positives = 202/421 (47%), Gaps = 89/421 (21%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + EF++ LP RIA P+ RD ++L+V +S+ + + LP +L S + ++
Sbjct: 7 IKISEFNYPLPDERIAKFPLATRDQSKLLVYRHG-----EVSEDIFTSLPHYLESGELMI 61
Query: 61 FNNTKVITAQLNGVRFCHINRREK----EISCTLHMRVSPN------------SWSVYAR 104
FNNTKVI A+L+ R+E E+ C V PN SW
Sbjct: 62 FNNTKVIQARLHF-------RKETGALIEVFCL--EPVQPNDYVLNFQQTRQCSWLCMIG 112
Query: 105 PSKVIKKGDILHFFSQDGQ------SRLEATVIDKWNTGEILLVFSISGIELERQISLVG 158
K K+G + + G+ +R E W I + I + + G
Sbjct: 113 NLKKWKEGTLSRIVNVKGKQIVLSATRGECKGTSHW----IDFSWDDDTITFADLLEVAG 168
Query: 159 TIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFV 218
+P+PPY+ R+ D YQT Y+KI+GSVAAPTAGLHFT +L+ L GI +
Sbjct: 169 ELPIPPYLNRE--TQESDKETYQTVYSKIKGSVAAPTAGLHFTERVLAALDERGIDREEL 226
Query: 219 TLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET 278
TLHVGAGTF PVK E+ + H MH+E + T + L + G ++VGTTS+R LE+
Sbjct: 227 TLHVGAGTFKPVKSEEIEGHEMHTEYISVSKHTIEKL---IAHNGEAIAVGTTSVRTLES 283
Query: 279 -------------ATTEDGIINPWSGF------------------------------TNI 295
AT ++ + W + T I
Sbjct: 284 LYYIGVLISHNPDATQDELHVQQWMPYEDKNDLTPVEALQQILDYLNRHEMEALHSSTQI 343
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
I PGY ++ V +++NFH P+STLL+LVSAF +++Y +A+ H +RF SYGD+SL
Sbjct: 344 IIAPGYTYKIVKKMVTNFHQPQSTLLLLVSAFVK-GNWRRIYDYALGHDFRFLSYGDSSL 402
Query: 356 L 356
L
Sbjct: 403 L 403
>gi|253570272|ref|ZP_04847681.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 1_1_6]
gi|251840653|gb|EES68735.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 1_1_6]
Length = 406
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 136/415 (32%), Positives = 206/415 (49%), Gaps = 81/415 (19%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ E+++ L RIA P+ RD ++L+V +S+ + + LP +L +VFN
Sbjct: 10 ISEYNYPLSDERIAKFPLAVRDQSKLLVYRHG-----EVSEDVFTSLPDYLPKGSLMVFN 64
Query: 63 NTKVITAQLNGVR--------FCH---------INRREKEISCTLHMRVSPNSWSVYARP 105
NTKVI A+L+ + FC +N ++ E + L M + W A
Sbjct: 65 NTKVIQARLHFRKETGALIEVFCLEPIQPNDYVLNFQQTEHAAWLCMIGNLKKWKDGALK 124
Query: 106 SKVIKKGDILHFFSQDGQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPP 164
++ KG + + G+ R + ID W+ E+ + + I + + G +P+PP
Sbjct: 125 REMTVKGFPITLTATRGECRGTSHWIDFSWDNPEV----TFADI-----LEVFGELPIPP 175
Query: 165 YIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
Y+ R + D YQT Y+KI+GSVAAPTAGLHFT +L L GI + +TLHVGA
Sbjct: 176 YL--NRDTEESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLEALQEKGIDLEELTLHVGA 233
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET------ 278
GTF PVK E+ + H MH+E ++ T + L G V+VGTTS+R LE+
Sbjct: 234 GTFKPVKSEEIEGHEMHTEYISVNRATIKKL---IDHDGCAVAVGTTSVRTLESLYHIGV 290
Query: 279 -------ATTEDGIINPWSGF------------------------------TNIFITPGY 301
AT E+ + W + T I I PGY
Sbjct: 291 TLAENPDATEEELHVKQWQPYEKYDQIPPVVALQKILGYLDRNGLEALHSSTQIIIAPGY 350
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+++ V +++NFH P+STLL+LVSAF + +Y +A++H +RF SYGD+SLL
Sbjct: 351 QYKIVKAMVTNFHQPQSTLLLLVSAFVK-GNWRTIYDYALAHDFRFLSYGDSSLL 404
>gi|304382488|ref|ZP_07364983.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
marshii DSM 16973]
gi|304336319|gb|EFM02560.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
marshii DSM 16973]
Length = 439
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 125/404 (30%), Positives = 188/404 (46%), Gaps = 53/404 (13%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVHPN-------L 35
M + +F+F L ++AL P V RD +LMV+H
Sbjct: 42 MKLSQFNFKLTDDKVALYPHTDEHRVTNAEGKKSVFKVKRRDECKLMVLHRKSQKIDMYK 101
Query: 36 SCPLVISDHLVSDLPAFLN---------SNDAIVFNNTKVITAQLNGVRFCHINRREKEI 86
+ P FL+ DA +FN+TKV A+L G + + + +I
Sbjct: 102 TDKDGKPLKDKKKKPVFLDFRNILDYFDEGDAFIFNDTKVFPARLYGTK----EKTDAKI 157
Query: 87 SCTL--HMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNT-GEIL-LV 142
L + W V P++ I+ G+ L F D + A VID + G L +
Sbjct: 158 EVFLLRELNAEMRLWDVLVEPARKIRIGNKLFF---DDSGTMVAEVIDNTTSRGRTLRFL 214
Query: 143 FSISGIELERQISLVGTIPLPPYIAR--------KRPIDARDYVDYQTTYAKIQGSVAAP 194
+ E +R++ +G PLP YI RP D+ D+Q +AK +G+V AP
Sbjct: 215 YDCPHEEFKRELYALGEAPLPRYIIDHKDKDGNPDRPTLEEDFEDFQCVFAKNEGAVTAP 274
Query: 195 TAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQA 254
GLHF+ L+ R+ GI F+TLH G G F ++VED H M SE +I A +
Sbjct: 275 ATGLHFSRELMKRMEIKGINFAFITLHCGLGNFNNIEVEDLTKHKMESEQMYIGAEACRT 334
Query: 255 LNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFH 314
+N K G RI +VG++ ++ ETA DG + + G+T+ FI P Y F D +++NF+
Sbjct: 335 VNEAKKTGHRICAVGSSVIKATETAVGPDGQLKEYDGWTSKFIFPPYEFGLADTMVANFY 394
Query: 315 LPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
P STLLM +AF G + + Y A+ + Y+F YGD L+
Sbjct: 395 HPLSTLLMATAAFGGYDLVMEAYDLALKNDYKFGCYGDAMLILN 438
>gi|281422487|ref|ZP_06253486.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
copri DSM 18205]
gi|281403470|gb|EFB34150.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
copri DSM 18205]
Length = 394
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 126/404 (31%), Positives = 196/404 (48%), Gaps = 59/404 (14%)
Query: 1 MMVKEFDFDLPPSRIALRP-----------------VFPRDSARLMVVHP-NLSCPLVIS 42
M + +F+F LP ++AL P + RD +RLMV+H + + +
Sbjct: 1 MKLSQFNFKLPKDQVALYPHKAKHVVKTASGERTFEITRRDESRLMVLHKKSETIEMYKK 60
Query: 43 DHLVSDL------PAFLN---------SNDAIVFNNTKVITAQLNGVRFCHINRREKEIS 87
D D+ P FL D +FNNTKV A+L G + + + +I
Sbjct: 61 DENGKDMVDADGNPVFLQFKDIVNYFEEGDTFIFNNTKVFPARLYGTK----EKTDAKIE 116
Query: 88 CTLHMRVSPNS--WSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNT-GEIL-LVF 143
L ++P W V P++ I+ G+ L F D + + A VID + G L ++
Sbjct: 117 VFLLRELNPEMRLWDVLVEPARKIRIGNKLFF---DDVNEMVAEVIDNTTSRGRTLRFLY 173
Query: 144 SISGIE--LERQISLVGTIPLPPYIARKRPIDAR--------DYVDYQTTYAKIQGSVAA 193
G +R + +G PLP Y+ IDAR D D+Q +A+++G+V A
Sbjct: 174 DEDGNHDVFKRSLFALGEAPLPRYV-----IDAREDHHATEDDMDDFQCVFAEVEGAVTA 228
Query: 194 PTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQ 253
P GLHF+ L+ R+ GI ++TLH G G F ++VED H M SE I
Sbjct: 229 PATGLHFSRELMKRMEINGINEAYITLHCGLGNFHDIEVEDLTKHKMDSEQMMISQEACD 288
Query: 254 ALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNF 313
+N K G R+ ++GT+ ++ ETA DG++ + G+TN FI P Y F D ++NF
Sbjct: 289 LVNKTKLAGHRVCAIGTSVMKATETAVGTDGMMKAFDGWTNKFIFPPYDFGLADCAVANF 348
Query: 314 HLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ P+STL+M +AF G + + Y+ A+ + Y F YGD+ L+
Sbjct: 349 YHPESTLMMSTAAFGGYDLVYEAYKMAVKNGYMFGCYGDSLLML 392
>gi|291515347|emb|CBK64557.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Alistipes shahii WAL 8301]
Length = 403
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 140/410 (34%), Positives = 207/410 (50%), Gaps = 66/410 (16%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ FD+DLP RIA P+ R +++L+V I++ +D+ L + + +VFN
Sbjct: 7 ISRFDYDLPDERIAKFPLAERSASKLLVWRGG-----EIAEKRFADIGDVLPAGELLVFN 61
Query: 63 NTKVITAQL-----NGVR---FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NTKVI A++ +G R FC + + +WS K K+G +
Sbjct: 62 NTKVIRARIVMHKPSGARIEVFCLEPHDPADYERAFAV-TGGCTWSCIVGNRKKWKEGYV 120
Query: 115 LHFFSQDG-QSRLEATVIDKWNTGEILLVFSISG-IELERQISLVGTIPLPPYIARKRPI 172
F + G L A +++ + E ++ F + + + + +G IP+PPY+ R+
Sbjct: 121 EINFERGGCAEHLRAWIVED-HGRECVVRFEWTAPMTFGQLLEYLGRIPIPPYLNRES-- 177
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+ D YQT Y+K +GSVAAPTAGLHFT L+ + + G VTLHVGAGTF+PVK
Sbjct: 178 EEIDNTRYQTVYSKFEGSVAAPTAGLHFTPELIGEMKARGFAFEEVTLHVGAGTFLPVKD 237
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE----------TATTE 282
ED H MH+E + T L + G I +VGTTS+R LE TA T
Sbjct: 238 EDAARHPMHTEHFEVRRATVVRL---LEKWGHITAVGTTSVRTLESLAALAWRIRTAGTP 294
Query: 283 DG--IINPW------------------SGF------------TNIFITP-GYRFRAVDIL 309
D ++ W SG+ T I ITP Y FR V +
Sbjct: 295 DAGRVVGQWELYDIPAEFSGREALQELSGYMEREGLDRLKASTQIMITPLDYEFRIVHNI 354
Query: 310 MSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
++NFH PKSTLL+LVSAF G + +++Y +A+ H +RF SYGD+S+L ++
Sbjct: 355 VTNFHQPKSTLLLLVSAFVG-DGWRRIYDYALGHGFRFLSYGDSSVLLRE 403
>gi|89099002|ref|ZP_01171882.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
sp. NRRL B-14911]
gi|89086406|gb|EAR65527.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
sp. NRRL B-14911]
Length = 269
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 113/278 (40%), Positives = 152/278 (54%), Gaps = 16/278 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V+ FDF LP IA P+ R S+RLMV+ + +LP +LN D +V
Sbjct: 1 MKVEMFDFHLPEELIAQTPLEDRTSSRLMVLDKEDGA---LQHETFKNLPEYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + +I L + + W +P+K +K+G + F
Sbjct: 58 LNDTRVLPARLFGAK----EGTGAKIEVLLLKQQEGDVWETLIKPAKRVKEGTRIEF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L A G LL F+ GI E + +G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGLLSAVCTGTEEQGGRLLKFNYEGIFYE-VLEQLGEMPLPPYI--KEQLDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL + G+ + F+TLHVG GTF PV VED +H M
Sbjct: 165 QTVYAKERGSAAAPTAGLHFTEELLDEIREKGVHIAFITLHVGLGTFRPVSVEDIHEHSM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET 278
H+E + TA+ LN V+ GGRI++VGTTS R LET
Sbjct: 225 HAEYYQVTEGTARLLNEVRENGGRIITVGTTSTRTLET 262
>gi|282877728|ref|ZP_06286543.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella buccalis ATCC 35310]
gi|281300300|gb|EFA92654.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella buccalis ATCC 35310]
Length = 388
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 124/393 (31%), Positives = 192/393 (48%), Gaps = 43/393 (10%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVH---------- 32
M + +F F+LP +AL P + RD +RLMV+H
Sbjct: 1 MKLSQFKFNLPEELVALYPHSVYHEIVDDKGEKHLSRMTRRDESRLMVLHRKSQTIDMFQ 60
Query: 33 PNLSCPLVISDHL-VSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTL- 90
N V +L + + + D +FN+TKV A+L G + + + +I L
Sbjct: 61 KNKKGKPVEGQYLEFRHVLDYFDEGDTFIFNDTKVFPARLYGTK----EKTDAKIEVFLL 116
Query: 91 -HMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNT-GEIL-LVFSISG 147
+ W V P++ I+ G+ L FF + G + A VID + G L ++
Sbjct: 117 RELNREMRLWDVLVEPARKIRIGNKL-FFDESGT--MVAEVIDNTTSRGRTLRFLYDCPH 173
Query: 148 IELERQISLVGTIPLPPYIARKRPI---DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNL 204
E +R++ +G PLP YI +R + DA D D+QT +AK +G+V A GLH + +
Sbjct: 174 EEFKRELFALGEAPLPRYILNQREVPHADAHDMEDFQTIFAKNEGAVTAAATGLHVSREM 233
Query: 205 LSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGR 264
+ R+ GI ++TLH G F ++VED H M SE IDA + +N K G R
Sbjct: 234 MKRMEIKGIHFAYITLHCGLSAFNNIEVEDLTKHKMDSEPMKIDAQACKIVNKAKQEGHR 293
Query: 265 IVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLV 324
+ +VGT+ ++ ETA DG++ + G+T+ FI P Y F D +++NF+ S LLM
Sbjct: 294 VCAVGTSVVKATETAVGTDGLLKEYDGWTSKFIFPPYDFGLADTMIANFYHSMSPLLMET 353
Query: 325 SAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+AF G E + Y A+ H Y+F YGD+ L+
Sbjct: 354 AAFGGYELVMEAYNLAVKHGYKFGCYGDSLLIL 386
>gi|218887143|ref|YP_002436464.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218758097|gb|ACL08996.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 417
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 141/391 (36%), Positives = 192/391 (49%), Gaps = 43/391 (10%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVH----PNLSCPLVISDHLVSDLPAFLNSNDA 58
++ + F LP +IA P R +RL+V+ S + H +DL L
Sbjct: 34 LESYRFHLPEDQIAQHPAPERGGSRLLVLDRRTMEKGSAAALTHAHF-ADLCDHLPEGCL 92
Query: 59 IVFNNTKVITAQLNGVR---------------------FCHINRREKEISCTLHMRVSPN 97
+V NN+KV+ A+L G+R S +R
Sbjct: 93 LVANNSKVLPARLLGLRPTGGKVEFLLLTPLPLLEELARSDAGAGSGRPSTGNGLRDEGA 152
Query: 98 SW-SVYA----RPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELER 152
W SV A R SK I+ GD++ F L VI + G + G +L +
Sbjct: 153 GWRSVPAEGLLRASKKIRPGDVMDFGPH-----LRVEVIQPGDFGRSAVRLHWMG-DLRQ 206
Query: 153 QISLVGTIPLPPYIARKRPIDARDYVD----YQTTYAKIQ--GSVAAPTAGLHFTSNLLS 206
G +PLPPYI R+ + + D + YQT YA GSVAAPTAGLHFT +L +
Sbjct: 207 LFLQQGHLPLPPYIRRETGVSSSDAQEDRDRYQTVYADDSRLGSVAAPTAGLHFTDDLRA 266
Query: 207 RLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIV 266
RL + K VTL+VG GTF PV+ D H MH E + TA A+ + K+ G +V
Sbjct: 267 RLAATDRKWAEVTLYVGYGTFSPVRCADIRQHAMHREYIEVSEATAAAIRAAKAEGRPVV 326
Query: 267 SVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSA 326
+VGTTS R LE G + ++G+T+IFI PGYRF D +++NFHLP+S+LLMLVSA
Sbjct: 327 TVGTTSTRTLEGTVRACGEVRAFTGWTDIFIKPGYRFTVADHIITNFHLPESSLLMLVSA 386
Query: 327 FCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F G Y A++ YRF+SYGD LL
Sbjct: 387 FAGRTRVLSAYAEAVARGYRFFSYGDAMLLL 417
>gi|218249453|ref|YP_002374555.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein QueA) [Borrelia burgdorferi ZS7]
gi|226322064|ref|ZP_03797589.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi Bol26]
gi|218164641|gb|ACK74702.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein QueA) [Borrelia burgdorferi ZS7]
gi|226232654|gb|EEH31408.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi Bol26]
Length = 343
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 130/365 (35%), Positives = 193/365 (52%), Gaps = 35/365 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF F+LP S I P R S+RL+V+ P L + + V+++ ++NSN +
Sbjct: 1 MKTKEFHFNLPHSLIEQYPSEKRGSSRLIVLDPQLQK--IYHKNSVNNILKYINSN---I 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHM----RVSPNSWSVYARPSKVIKKGDILH 116
FNN+K +++ E E+S + R+ N ++ SK G+
Sbjct: 56 FNNSKARKSRIYA---------ESEMSSNVEFLILDRIGTNLFTALVSKSKKQIIGNFYK 106
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFS--ISGIELERQISLVGTIPLPPYIARKRPIDA 174
F L ++ K N+ E++L F+ + E+ +PLP YI KR D
Sbjct: 107 F-----PEGLMGEILSK-NSSEVVLKFNNDVGEDYFEKHC----FVPLPSYI--KRDYDK 154
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D YQT Y+K GS A+ TAGLHF+ +L S + I+ F+TLHVG GTF+PV+ +
Sbjct: 155 IDEDRYQTIYSKYVGSAASATAGLHFSIDLFSVFENNNIEYDFITLHVGLGTFLPVRSKK 214
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFT 293
++H MH E I A L + K G +I+S+ TT+LR LE++ + T
Sbjct: 215 VEEHNMHFETFLIKDFVAVRLQNAKLLGKKILSIVTTTLRALESSYDNNLKKFKTGQQST 274
Query: 294 NIFITPG--YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
N+FI PG Y F+ VD+L +NFH P+STLLMLVS+F G + Y+ AI+ Y+F+SYG
Sbjct: 275 NLFIYPGKNYCFKFVDMLFTNFHTPQSTLLMLVSSFAGKDFVFSFYEEAINKGYKFFSYG 334
Query: 352 DTSLL 356
D L+
Sbjct: 335 DAMLI 339
>gi|313141463|ref|ZP_07803656.1| ribosyltransferase-isomerase [Helicobacter canadensis MIT 98-5491]
gi|313130494|gb|EFR48111.1| ribosyltransferase-isomerase [Helicobacter canadensis MIT 98-5491]
Length = 342
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 127/369 (34%), Positives = 191/369 (51%), Gaps = 42/369 (11%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVS-----DLPAFLNSN 56
M++ +D+DLP IAL P+ P+++ARL+V DH ++ D FL
Sbjct: 1 MLESYDYDLPKELIALNPIMPQENARLLVYDR--------KDHSITHTTFRDFAKFLPKE 52
Query: 57 DAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
+VFN+TKVI A++ G + +I H + N + + + +K G+I+
Sbjct: 53 TLLVFNDTKVIPARIYGKKLQKEALGGGKIEALFHKEIMENLYLMQLKGR--LKIGNIVE 110
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVF---SISGIELERQ-----ISLVGTIPLPPYIAR 168
F + A ++ G + F + L RQ + G IPLPPYI
Sbjct: 111 FVG------VFAKILKDCGMGFKEVSFFRDEKCLLPLSRQEFFDFLEQFGHIPLPPYI-- 162
Query: 169 KRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFM 228
KR + D V+Y + +AK G++AAPTA LHF L + FVTLHVGAGTF+
Sbjct: 163 KREDNQEDRVNYNSVFAKNVGAIAAPTASLHFNQEAFKAL-QRDFESAFVTLHVGAGTFI 221
Query: 229 PVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIIN 287
V E+ +H MH E I + + + V I ++GTT+ R++E A T+
Sbjct: 222 GVSTENILEHKMHQETFVIPKESVEKIKKV----SHITAIGTTATRVVEYFARTKQ---- 273
Query: 288 PWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
G ++F+ P + + L++NFHLPK+TLLMLV++F G+EETK++Y+ AI YRF
Sbjct: 274 -TQGECDLFLHPQNKPIITNALLTNFHLPKTTLLMLVASFVGLEETKRIYKQAIEEKYRF 332
Query: 348 YSYGDTSLL 356
YSYGD L+
Sbjct: 333 YSYGDGMLV 341
>gi|257784681|ref|YP_003179898.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Atopobium
parvulum DSM 20469]
gi|257473188|gb|ACV51307.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Atopobium
parvulum DSM 20469]
Length = 387
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 127/400 (31%), Positives = 195/400 (48%), Gaps = 56/400 (14%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD++LP RIA P PRDS RL+V+H I +D+ +L+ D +V
Sbjct: 1 MRTDDFDYNLPEERIAQTPAEPRDSCRLLVLHREDGR---IEHKRFTDIVEYLDPGDLVV 57
Query: 61 FNNTKVITAQL-------NGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGD 113
N T+V+ A+L GV + +R ++I + W P K +K G
Sbjct: 58 VNQTRVMPARLVGKKQNTGGVSETLLLKRREDIDAL------GSVWECLVNPGKRLKPGA 111
Query: 114 ILHFFS------QDGQSRLEATVID--KWNTGEILLVFSISGIE-LERQISLVGTIPLPP 164
++ + + L T++D N G L+ F G L+ I G +PLPP
Sbjct: 112 VIEYRAGGLHAPDSAPVVLTGTIVDFVDDNRGGRLVRFEAQGERTLDEAIHEAGHVPLPP 171
Query: 165 YIARKRPIDARDYVDYQTTYA-KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVG 223
YI + D YQT YA + + S AAPTAGLHFT L+ + + G++ V L VG
Sbjct: 172 YITQYE----GDPEKYQTVYAMQDEHSAAAPTAGLHFTPKLIETIKAKGVQWASVELEVG 227
Query: 224 AGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET----- 278
TF V +D H++H+E + +A+ + K+ G +++++GTTS+R LE+
Sbjct: 228 IDTFRLVTEDDPTKHVIHTERYHVAPEVVEAVKATKAAGHKVIAIGTTSVRSLESTWDSQ 287
Query: 279 --------------------ATTEDG-IINPWSGFTNIFITPGYRFRAVDILMSNFHLPK 317
A T G ++ + TN+++ PG F VD +++NFH+P+
Sbjct: 288 LPADEPPVVAHRFEEAEDSAAVTHKGDMVARENATTNLYLMPGSTFHVVDTMVTNFHVPR 347
Query: 318 STLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
STL+MLVSAF E+ YQ AI YRF S+GD ++
Sbjct: 348 STLMMLVSAFATREQIMNAYQSAIDEKYRFLSFGDAMIII 387
>gi|319956387|ref|YP_004167650.1| s-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Nitratifractor salsuginis DSM 16511]
gi|319418791|gb|ADV45901.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Nitratifractor salsuginis DSM 16511]
Length = 343
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 137/366 (37%), Positives = 194/366 (53%), Gaps = 41/366 (11%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ + +D+ LPP +IA +PV P D+AR++V I DL FL S A+
Sbjct: 9 LTQSYDYTLPPKQIATQPVEPPDAARMLVFDRRDGS---IHHARFRDLERFLPSETALFL 65
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+VI A+L G + + L+ + N + R +++G L F +
Sbjct: 66 NDTRVIKARLYGTKATG-----GRVELLLNKPLPDNEYLAMIR--GRVREGTRLSF-DEG 117
Query: 122 GQSRLEATVID-----KWNTGEILLVFSISGIELERQISLVGTIPLPPYIARK-RPIDAR 175
Q+ + A + D ++ + L FS LER +G +PLPPY+ R+ P D R
Sbjct: 118 LQAEVRALLPDGARRVRFYQEDKELDFSRLVEILER----IGHVPLPPYMNREDTPEDTR 173
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
Y Q+ +A+ G+VAAPTA LHFT L RL S Y +TLHVGAGTF PV+ E
Sbjct: 174 HY---QSLFAREAGAVAAPTASLHFTPEQLERLKSTH-PCYTLTLHVGAGTFKPVESEKI 229
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE----TATTEDGIINPWSG 291
+H MHSE I A+ L +++VGTT R +E T+ TE G
Sbjct: 230 LEHPMHSEYFRIPPEAAEYLRG----DAPLLAVGTTVTRTVEYFARTSRTE--------G 277
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
++F+ PG R V+ L++NFHLPKSTL+MLVSAF G E+T ++Y+ AI YRFYSYG
Sbjct: 278 ECDLFLHPGNPPRRVNHLLTNFHLPKSTLIMLVSAFIGREKTLELYREAIREGYRFYSYG 337
Query: 352 DTSLLF 357
D L+
Sbjct: 338 DAMLIL 343
>gi|237709677|ref|ZP_04540158.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 9_1_42FAA]
gi|229456313|gb|EEO62034.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 9_1_42FAA]
Length = 405
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 136/419 (32%), Positives = 201/419 (47%), Gaps = 89/419 (21%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ EF++ LP RIA P+ RD ++L+V +++ + + LP +L S + ++FN
Sbjct: 9 ISEFNYPLPDERIAKFPLATRDQSKLLVYRHG-----EVNEDVFTSLPQYLESGELMIFN 63
Query: 63 NTKVITAQLNGVRFCHINRREK----EISCTLHMRVSPN------------SWSVYARPS 106
NTKVI A+L+ R+E E+ C + PN SW
Sbjct: 64 NTKVIQARLHF-------RKETGALIEVFCL--EPIQPNDYVLSFQQTRRCSWLCMIGNL 114
Query: 107 KVIKKGDILHFFSQDGQ------SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTI 160
K KKG + G+ +R E W I + I + ++G +
Sbjct: 115 KKWKKGMLSRVVDVKGKQIVLSATRGECRGTSHW----IDFSWDDDSITFADLLEVIGEL 170
Query: 161 PLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTL 220
P+PPY+ R+ D YQT Y+KI+GSVAAPTAGLHFT +L+ L GI +TL
Sbjct: 171 PIPPYLNRE--TQESDKETYQTVYSKIKGSVAAPTAGLHFTERVLAALDERGIDREELTL 228
Query: 221 HVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-- 278
HVGAGTF PVK E+ + H MH+E + T + L + G+ ++VGTTS+R LE+
Sbjct: 229 HVGAGTFKPVKSEEIEGHEMHTEYISVSKHTIEKL---IAHNGKAIAVGTTSVRTLESLY 285
Query: 279 -----------ATTEDGIINPWSGF------------------------------TNIFI 297
A + + W + T I I
Sbjct: 286 YIGVLIHHNPDAAQNELHVQQWMPYEDKNELTPVEALQQILDYLHRHEMEALHSNTQIII 345
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+++ V +++NFH P+STLL+LVSAF +K+Y +A+ H +RF SYGD+SLL
Sbjct: 346 APGYQYKIVRKMVTNFHQPQSTLLLLVSAFVR-GNWRKIYDYALEHDFRFLSYGDSSLL 403
>gi|195941761|ref|ZP_03087143.1| S-adenosylmethionine: tRNA ribosyltransferase- isomerase [Borrelia
burgdorferi 80a]
Length = 343
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 133/365 (36%), Positives = 195/365 (53%), Gaps = 35/365 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF F+L S I P R S+RL+V+ P L + + V+++ ++NSN V
Sbjct: 1 MKTKEFHFNLSYSLIEQYPSEKRGSSRLIVLDPQLQK--IYHKNSVNNILKYINSN---V 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHM----RVSPNSWSVYARPSKVIKKGDILH 116
FNN+K +++ E E+S + R+ N ++ SK G+
Sbjct: 56 FNNSKARKSRIYA---------ESEMSSNVEFLILDRIDTNLFTALVSKSKKQIIGNFYK 106
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIE--LERQISLVGTIPLPPYIARKRPIDA 174
F +G L ++ K N+ E++L F+ + E E+ +PLP YI KR D
Sbjct: 107 F--PEG---LMDEILSK-NSSEVVLKFNNNVGEDYFEKHC----FVPLPSYI--KRDYDK 154
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D YQT Y+K GS A+ TAGLHF+ +L S + I+ F+TLHVG GTF+PV+ +
Sbjct: 155 IDEDRYQTIYSKYVGSTASATAGLHFSRDLFSAFENNNIEYDFITLHVGLGTFLPVRSKK 214
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFT 293
++H MH E I A L + K G RI+S+ TT+LR LE++ + T
Sbjct: 215 VEEHNMHFETFLIKDFVAVRLQNAKLLGKRILSIVTTTLRALESSYDNNLKKFKTGQQST 274
Query: 294 NIFITPG--YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
N+FI PG Y F+ VD+L +NFH P+STLLMLVS+F G + Y+ AI+ Y+F+SYG
Sbjct: 275 NLFIYPGKNYCFKFVDMLFTNFHTPQSTLLMLVSSFAGKDFVFSFYEEAINKGYKFFSYG 334
Query: 352 DTSLL 356
D L+
Sbjct: 335 DAMLI 339
>gi|167752859|ref|ZP_02424986.1| hypothetical protein ALIPUT_01120 [Alistipes putredinis DSM 17216]
gi|167659928|gb|EDS04058.1| hypothetical protein ALIPUT_01120 [Alistipes putredinis DSM 17216]
Length = 405
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 139/412 (33%), Positives = 201/412 (48%), Gaps = 72/412 (17%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ FD+DLP RIA P+ R +++L+V IS+ D+ L +VFN
Sbjct: 10 IDRFDYDLPDERIAKYPLEERSASKLLVYERG-----EISERRFRDIGDILPEGTLLVFN 64
Query: 63 NTKVITAQL-----NGVR---FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NTKVI A++ +G R FC + ++ S WS K K+G +
Sbjct: 65 NTKVIRARIIMHKPSGARIEVFCLEPHDPADYERAFAVKGSCR-WSCIVGNLKKWKEGPL 123
Query: 115 LHFFSQDGQSRLEATVIDKWNTGE-----ILLVFSISGIELERQISLVGTIPLPPYIARK 169
+ F +G+ A + W GE I+ + + + + +G IP+PPY+ R+
Sbjct: 124 VIDFEYEGR----AERMLAWREGEGGREQIVRFEWTADLTFGQLLEHLGRIPIPPYLNRE 179
Query: 170 RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
D YQT Y+K +GSVAAPTAGLHFT L+ R+ + G VTLHVGAGTF+P
Sbjct: 180 S--QEIDNTRYQTVYSKFEGSVAAPTAGLHFTPELIERMRTQGFSFEEVTLHVGAGTFLP 237
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-------- 281
VK D H MH+E I + + L + I +VGTTS+R LE+ T
Sbjct: 238 VKDRDAAAHPMHTEHFEIRRSSVERL---LEKWDNITAVGTTSVRTLESLTALAWRIRTS 294
Query: 282 ----EDGIINPWSGF------------------------------TNIFITP-GYRFRAV 306
+I W + T I ITP GYRFR V
Sbjct: 295 GAPDASRVIGQWELYDLPEVFTGREALQVLSDYMVREGIEKLKAATQIMITPLGYRFRIV 354
Query: 307 DILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+++NFH PKSTLL+LVSA+ G ++ ++Y +A++H +RF SYGD+S+L +
Sbjct: 355 RNIVTNFHQPKSTLLLLVSAYVG-DDWHRIYDYALTHDFRFLSYGDSSVLMR 405
>gi|150002930|ref|YP_001297674.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
vulgatus ATCC 8482]
gi|149931354|gb|ABR38052.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
vulgatus ATCC 8482]
Length = 405
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 137/421 (32%), Positives = 202/421 (47%), Gaps = 89/421 (21%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + EF++ LP RIA P+ RD ++L+V +S+ + + LP +L S + ++
Sbjct: 7 IKISEFNYPLPDERIAKFPLATRDQSKLLVYRHG-----EVSEDIFTSLPHYLESGELMI 61
Query: 61 FNNTKVITAQLNGVRFCHINRREK----EISCTLHMRVSPN------------SWSVYAR 104
FNNTKVI A+L+ R+E E+ C V PN SW
Sbjct: 62 FNNTKVIQARLHF-------RKETGALIEVFCL--EPVQPNDYVLNFQQTRQCSWLCMIG 112
Query: 105 PSKVIKKGDILHFFSQDGQ------SRLEATVIDKWNTGEILLVFSISGIELERQISLVG 158
K K+G + + G+ +R E W I + I + + G
Sbjct: 113 NLKKWKEGTLSRIVNVKGKQIVLSATRGECKGTSHW----IDFSWDDDTITFADLLEVAG 168
Query: 159 TIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFV 218
+P+PPY+ R+ D YQT Y+KI+GSVAAPTAGLHFT +L+ L GI +
Sbjct: 169 ELPIPPYLNRE--TQESDKETYQTVYSKIKGSVAAPTAGLHFTERVLAALDERGIDREEL 226
Query: 219 TLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET 278
TLHVGAGTF PVK E+ + H MH+E + T + L + G ++VGTTS+R LE+
Sbjct: 227 TLHVGAGTFKPVKSEEIEGHEMHTEYISVSKHTIEKL---IAHHGEAIAVGTTSVRTLES 283
Query: 279 -------------ATTEDGIINPWSGF------------------------------TNI 295
AT ++ + W + T I
Sbjct: 284 LYYIGVLISHNPDATQDELHVQQWMPYEDKNDLTPVEALQQILDYLNRHEMEALHSSTQI 343
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
I PGY ++ V +++NFH P+STLL+LVSAF +++Y +A+ H +RF SYGD+SL
Sbjct: 344 IIAPGYTYKIVKKMVTNFHQPQSTLLLLVSAFVK-GNWRRIYDYALGHDFRFLSYGDSSL 402
Query: 356 L 356
L
Sbjct: 403 L 403
>gi|303232835|ref|ZP_07319519.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Atopobium
vaginae PB189-T1-4]
gi|302481025|gb|EFL44101.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Atopobium
vaginae PB189-T1-4]
Length = 387
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 127/400 (31%), Positives = 199/400 (49%), Gaps = 56/400 (14%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD++LP IA PV PRDS +L+V+H + I D+ + + D IV
Sbjct: 1 MRTDDFDYELPEDHIAQAPVTPRDSCKLLVLHRDTG---EIEHKHFFDIIDYFDEGDLIV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISC-TLHMR----VSPNS--WSVYARPSKVIKKGD 113
N T+V+ A+L G ++ I+C TL +R + P W P + +K G
Sbjct: 58 ANKTRVLPARLIG------KKKPSGITCETLLLRRREDLDPMGSIWECLVNPGRRMKPGV 111
Query: 114 ILHFFS------QDGQSRLEATVID--KWNTGEILLVFS-ISGIELERQISLVGTIPLPP 164
L + L A ++D + N G L+ F+ +G+ L+ I G +PLPP
Sbjct: 112 CLEYREGGLHAPDSAPVVLTARMLDFIEENRGGRLVKFTPAAGLSLDSAIHKAGHVPLPP 171
Query: 165 YIARKRPIDARDYVDYQTTYA-KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVG 223
YI R D YQT Y+ + S A+PTAGLHFT+ L+ R+ G++ V L VG
Sbjct: 172 YITRYE----GDPEKYQTVYSMHEEHSAASPTAGLHFTNELIERIKQKGVQWKTVELEVG 227
Query: 224 AGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA---- 279
TF V+ +D H MH+E + A+++ K+ G R++++GTTS+R LE+A
Sbjct: 228 IDTFRLVEEDDPTQHEMHTERYHVPQDVVDAVHATKAAGKRVIAIGTTSVRSLESAFDTT 287
Query: 280 ----------------------TTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPK 317
I+ + T+++I PGY + VD +++NFH+P+
Sbjct: 288 CACATPPVCAQRFESCPDAAAVCGHGDIVACANATTSLYIMPGYTWHVVDCMVTNFHVPR 347
Query: 318 STLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
STL+M+VS+F ++ Y +AI H YRF S+GD ++
Sbjct: 348 STLMMMVSSFASRDQIMDAYANAIEHNYRFLSFGDAMIML 387
>gi|254442307|ref|ZP_05055783.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Verrucomicrobiae bacterium DG1235]
gi|198256615|gb|EDY80923.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Verrucomicrobiae bacterium DG1235]
Length = 357
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 146/373 (39%), Positives = 194/373 (52%), Gaps = 42/373 (11%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
F + LP RIA P RD++RL+VVH I SDLP FL + D+I NN +
Sbjct: 6 FAYHLPDERIAQEPASARDASRLLVVH---RSERRIEHRRFSDLPEFLGARDSIFRNNAR 62
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPN---SWSVYARPSKVIKKGDILHFFSQDG 122
V+ A+L R + + C L +R + N W RP K + G F++DG
Sbjct: 63 VLPARLYAQR-----QTGGAVECLL-LRPASNDGLEWWTLIRPGKKLPVGST---FARDG 113
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISL------VGTIPLPPYIARKRPIDARD 176
A+V++K E + FS LER S+ +G +PLPPYIAR + D D
Sbjct: 114 F--FSASVVEKNEKAEYRVRFS-----LERHASVPALADELGKMPLPPYIARDKSDDRDD 166
Query: 177 YVD--YQTTYAKIQGSVAA--PTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
YQT YA SVAA PTAGLHFT ++ +L + G + + LHVG GTF P++
Sbjct: 167 SDKERYQTVYAAADKSVAAAAPTAGLHFTPAIVEKLAAQGATFHDLALHVGMGTFKPIQC 226
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINP--WS 290
E +DH +H EI I T A+ + SR R V VGTTS+R +E + I +
Sbjct: 227 ERVEDHQIHREIYEIPESTQNAIRTPNSR--RRVCVGTTSVRSIEDYLAKSTTIQTGNFV 284
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFC------GIEETKKMYQHAISHA 344
G +IFI P FR VD L++NFH P STLL LVS+F GI K++Y AI+
Sbjct: 285 GEADIFIYPPRDFRGVDALITNFHQPHSTLLCLVSSFLDPNGTDGIAWLKEIYAEAINMK 344
Query: 345 YRFYSYGDTSLLF 357
YRF SYGD L+
Sbjct: 345 YRFLSYGDAMLIL 357
>gi|198276273|ref|ZP_03208804.1| hypothetical protein BACPLE_02465 [Bacteroides plebeius DSM 17135]
gi|198270715|gb|EDY94985.1| hypothetical protein BACPLE_02465 [Bacteroides plebeius DSM 17135]
Length = 422
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 133/415 (32%), Positives = 204/415 (49%), Gaps = 81/415 (19%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++++ LP RIA P+ RD ++L+V IS+ + LP +L ++FN
Sbjct: 26 ISDYNYPLPDERIAKFPLPVRDQSKLLVYQHG-----QISETHFTSLPDYLEPGTLMIFN 80
Query: 63 NTKVITAQLNGVR--------FCH---------INRREKEISCTLHMRVSPNSWSVYARP 105
NTKVI A+L+ + FC +N ++ + + L M + W
Sbjct: 81 NTKVIQARLHFRKETGALIEIFCLEPIKPNDYVLNFQQTQHAAWLCMIGNLKKWKEGPLH 140
Query: 106 SKVIKKGDILHFFSQDGQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPP 164
++ KG L + G+ + ID W+ E+ + + I + G +P+PP
Sbjct: 141 KEMTVKGKTLTLTATRGECHGTSHWIDFTWDNPEV----TFADI-----LEFFGELPIPP 191
Query: 165 YIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
Y+ R+ D YQT Y+KI+GSVAAPTAGLHFT +L+ L G+ + VTLHVGA
Sbjct: 192 YLNRE--TQESDKETYQTVYSKIKGSVAAPTAGLHFTERVLNALKEKGVDLEEVTLHVGA 249
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET------ 278
GTF PVK E+ + H MH+E ++ T + L + GG V+VGTTS+R LE+
Sbjct: 250 GTFKPVKSEEIEGHEMHTEYISVNRGTIEKL---LAHGGEAVAVGTTSVRTLESLYYIGV 306
Query: 279 -------ATTEDGIINPWSGF------------------------------TNIFITPGY 301
A+ ++ + W + T I I PGY
Sbjct: 307 TLSQHPDASQQELHVQQWQPYETHPELSTTEALQQILDYMNRNQLDALHTSTQIIIAPGY 366
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ V +++NFH P+STLL+LVSAF + +Y +A++H +RF SYGD+SLL
Sbjct: 367 NYHIVKKMVTNFHQPQSTLLLLVSAFVK-GNWRPIYDYALAHDFRFLSYGDSSLL 420
>gi|308063247|gb|ADO05134.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori Sat464]
Length = 345
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 124/359 (34%), Positives = 194/359 (54%), Gaps = 25/359 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D+DLP IA P+ P++ A+L+V I+ + F N +V N
Sbjct: 6 LESYDYDLPKELIANYPILPKEKAKLLVYERRSQK---ITHTTFEHVLDFFPKNALVVLN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKVI A+L G + + + E+ H N+ + IK GD + F
Sbjct: 63 DTKVIKARLFGSKHAFLPSKTTEV--FFHRFFKDNTALTQIKGK--IKVGDKIFF----- 113
Query: 123 QSRLEATVIDKWNTGEILLVF-----SISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+ A V++ + G+ L+ F ++ + + + G +PLPPYI KR ++ D
Sbjct: 114 DAHYHAEVLELLHNGQRLIAFYGNKTPLNQANILKLLEQYGHMPLPPYI--KRADESLDA 171
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
+YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+ +D +
Sbjct: 172 HEYQSVFAKHMGAVAAPTASLHFSQNTLEKLLK-DFKHAFLTLHVGAGTFLGVETKDIRE 230
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H +H+E+ I + + L + I+ +GTT+LR +E + N + +IF+
Sbjct: 231 HQIHTEVLRIPKKSQEIL----QKSQEILCIGTTALRSVEYFKRLENP-NQEAFECDIFL 285
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
V+ L++NFHLPKS+LLMLVSA G+E+TK++YQ AI YRFYSYGD L+
Sbjct: 286 HLANPILHVNYLLTNFHLPKSSLLMLVSAMVGLEKTKEIYQIAIEKKYRFYSYGDGMLI 344
>gi|313886934|ref|ZP_07820637.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas asaccharolytica PR426713P-I]
gi|312923631|gb|EFR34437.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas asaccharolytica PR426713P-I]
Length = 425
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 138/445 (31%), Positives = 203/445 (45%), Gaps = 124/445 (27%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+ LP RIA P+ RD RL++ + DH ++LP L + ++ N
Sbjct: 15 INDYDYPLPDERIAEHPLAERDQCRLLLSDATGR----LEDHTFAELPQLLPPHALLIRN 70
Query: 63 NTKVITAQL-----NGVRF--------------------------CHIN-----RREKEI 86
NT+VI A++ G R C + R E+ I
Sbjct: 71 NTRVIKARIFFVKATGARIEILCLDPYRPVSYEESLSSLGSCSWHCLVGNSKKWRPEQTI 130
Query: 87 SCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSIS 146
SCTL + ++ + S+ ++ D++ F D GEIL
Sbjct: 131 SCTLPL---AGGQTITLQASRAVETPDVVTFSWSDETKSF----------GEIL------ 171
Query: 147 GIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLS 206
L G +P+PPY+ R+ ++ D DYQT YA+I+GSVAAPTAGLHFT L
Sbjct: 172 --------ELCGQLPIPPYLNRE--TESSDLTDYQTVYARIEGSVAAPTAGLHFTPELDD 221
Query: 207 RLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIV 266
RL++ G ++ +TLHVGAGTF+PVK +H MHSE + PT ++ V
Sbjct: 222 RLLAEGHRITELTLHVGAGTFLPVKGRQVAEHQMHSE--YCSVPTVTLETLLEHIDSPFV 279
Query: 267 SVGTTSLRLLET----------ATTEDGII------NPWSGF------------------ 292
+GTTS+R LE+ A E G + + W +
Sbjct: 280 PIGTTSVRTLESLYWYAVALQQAAQEGGDVAEPFHLDQWYSYRMRQSCGAALPSRREALE 339
Query: 293 -----------------TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKK 335
T + I PGY++ VDIL++NFH PKSTLL+LVSA G +
Sbjct: 340 ILLRYARHRGLDRLTFSTALLIAPGYQYHMVDILVTNFHQPKSTLLLLVSALIG-PRWRT 398
Query: 336 MYQHAISHA-YRFYSYGDTSLLFQK 359
+Y+HA++ YRF SYGD LL+++
Sbjct: 399 LYEHALADVQYRFLSYGDACLLYRQ 423
>gi|224417922|ref|ZP_03655928.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter canadensis MIT 98-5491]
Length = 346
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 126/370 (34%), Positives = 192/370 (51%), Gaps = 42/370 (11%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVS-----DLPAFLNS 55
++++ +D+DLP IAL P+ P+++ARL+V DH ++ D FL
Sbjct: 4 LLLESYDYDLPKELIALNPIMPQENARLLVYDR--------KDHSITHTTFRDFAKFLPK 55
Query: 56 NDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
+VFN+TKVI A++ G + +I H + N + + + +K G+I+
Sbjct: 56 ETLLVFNDTKVIPARIYGKKLQKEALGGGKIEALFHKEIMENLYLMQLKGR--LKIGNIV 113
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVF---SISGIELERQ-----ISLVGTIPLPPYIA 167
F + A ++ G + F + L RQ + G IPLPPYI
Sbjct: 114 EFVG------VFAKILKDCGMGFKEVSFFRDEKCLLPLSRQEFFDFLEQFGHIPLPPYI- 166
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
KR + D V+Y + +AK G++AAPTA LHF L + FVTLHVGAGTF
Sbjct: 167 -KREDNQEDRVNYNSVFAKNVGAIAAPTASLHFNQEAFKAL-QRDFESAFVTLHVGAGTF 224
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGII 286
+ V E+ +H MH E I + + + V I ++GTT+ R++E A T+
Sbjct: 225 IGVSTENILEHKMHQETFVIPKESVEKIKKV----SHITAIGTTATRVVEYFARTKQ--- 277
Query: 287 NPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYR 346
G ++F+ P + + L++NFHLPK+TLLMLV++F G+EETK++Y+ AI YR
Sbjct: 278 --TQGECDLFLHPQNKPIITNALLTNFHLPKTTLLMLVASFVGLEETKRIYKQAIEEKYR 335
Query: 347 FYSYGDTSLL 356
FYSYGD L+
Sbjct: 336 FYSYGDGMLV 345
>gi|253827261|ref|ZP_04870146.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase
[Helicobacter canadensis MIT 98-5491]
gi|253510667|gb|EES89326.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase
[Helicobacter canadensis MIT 98-5491]
Length = 351
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 126/370 (34%), Positives = 192/370 (51%), Gaps = 42/370 (11%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVS-----DLPAFLNS 55
++++ +D+DLP IAL P+ P+++ARL+V DH ++ D FL
Sbjct: 9 LLLESYDYDLPKELIALNPIMPQENARLLVYDR--------KDHSITHTTFRDFAKFLPK 60
Query: 56 NDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
+VFN+TKVI A++ G + +I H + N + + + +K G+I+
Sbjct: 61 ETLLVFNDTKVIPARIYGKKLQKEALGGGKIEALFHKEIMENLYLMQLKGR--LKIGNIV 118
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVF---SISGIELERQ-----ISLVGTIPLPPYIA 167
F + A ++ G + F + L RQ + G IPLPPYI
Sbjct: 119 EFVG------VFAKILKDCGMGFKEVSFFRDEKCLLPLSRQEFFDFLEQFGHIPLPPYI- 171
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
KR + D V+Y + +AK G++AAPTA LHF L + FVTLHVGAGTF
Sbjct: 172 -KREDNQEDRVNYNSVFAKNVGAIAAPTASLHFNQEAFKAL-QRDFESAFVTLHVGAGTF 229
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGII 286
+ V E+ +H MH E I + + + V I ++GTT+ R++E A T+
Sbjct: 230 IGVSTENILEHKMHQETFVIPKESVEKIKKV----SHITAIGTTATRVVEYFARTKQ--- 282
Query: 287 NPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYR 346
G ++F+ P + + L++NFHLPK+TLLMLV++F G+EETK++Y+ AI YR
Sbjct: 283 --TQGECDLFLHPQNKPIITNALLTNFHLPKTTLLMLVASFVGLEETKRIYKQAIEEKYR 340
Query: 347 FYSYGDTSLL 356
FYSYGD L+
Sbjct: 341 FYSYGDGMLV 350
>gi|221194651|ref|ZP_03567708.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Atopobium
rimae ATCC 49626]
gi|221185555|gb|EEE17945.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Atopobium
rimae ATCC 49626]
Length = 387
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/399 (32%), Positives = 192/399 (48%), Gaps = 56/399 (14%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+DLP IA P PRDS RL+V+H + I D+ +L+ D IV
Sbjct: 1 MRTDDFDYDLPDELIAQTPAEPRDSCRLLVLHRDDGS---IEHRHFRDIVEYLDPGDLIV 57
Query: 61 FNNTKVITAQL-------NGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGD 113
N T+V+ A+L GV + +R +++ H+ W P K +K G
Sbjct: 58 ANKTRVMPARLVGRKRETGGVSETLLLKRREDLDPLGHL------WECLVSPGKRLKPGA 111
Query: 114 ILHFFSQDGQSRLEATVI--------DKWNTGEILLVFSISGIE-LERQISLVGTIPLPP 164
I+ + + + L + V+ + + G L+ F G + L+ I G +PLPP
Sbjct: 112 IIEYRAGGLHAPLTSPVVLCGEIVDFVEGSKGGRLVRFEAPGTQALDEAIHAAGHVPLPP 171
Query: 165 YIARKRPIDARDYVDYQTTYA-KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVG 223
YI D YQT YA + + S AAPTAGLHFT L+ + + GI V L VG
Sbjct: 172 YITDYEG----DPEKYQTVYAMQDEHSAAAPTAGLHFTPELIEDIKTHGITWESVELEVG 227
Query: 224 AGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED 283
TF V+ +D H++H+E + A+ + K+ G R++++GTTS+R LE+A D
Sbjct: 228 IDTFRLVEEDDPTQHVIHTERYHVSQGVIDAIRTTKAEGHRVIAIGTTSVRSLESAWDGD 287
Query: 284 GII-NPW-------------------------SGFTNIFITPGYRFRAVDILMSNFHLPK 317
NP + TN+++ PG F VD +++NFH+P+
Sbjct: 288 ACASNPAITARYFEDASGSARITKTGDLVARENATTNLYLMPGSTFHVVDAMVTNFHVPR 347
Query: 318 STLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
STL+MLVSAF E Y AI YRF S+GD L+
Sbjct: 348 STLMMLVSAFASRESIMSAYDAAIKERYRFLSFGDAMLI 386
>gi|256371731|ref|YP_003109555.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Acidimicrobium ferrooxidans DSM 10331]
gi|256008315|gb|ACU53882.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Acidimicrobium ferrooxidans DSM 10331]
Length = 349
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 122/358 (34%), Positives = 190/358 (53%), Gaps = 32/358 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ V FD+DLP IA P+ PR +ARL+V P ++ V+DL L D +V
Sbjct: 16 LSVDAFDYDLPAEAIAHDPIEPRRAARLLVA--RRGAP--VAHARVADLARLLEPGDLVV 71
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN-SWSVYARPSKVIKKGDILHFFS 119
N + V+ A+L H+ R L +R P+ + RP++ ++ G+ L
Sbjct: 72 VNESAVVPARL------HLQRSSGGAVEVLLLRQLPDGTAEALVRPNRRVRAGERL---L 122
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKR-PIDARDYV 178
DG +E V E + + ++ ++ ER ++ +G PLPPY+ R+ P++
Sbjct: 123 ADGVEVVE--VGGALEAVEGMTIRAVRVLDPER-VASIGVAPLPPYLGRQDIPLE----- 174
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT +A+ GSVAAPTAGLH +L+ L + GI V + LHVG GTF PV H
Sbjct: 175 RYQTVFARRPGSVAAPTAGLHLDEVVLADLAARGIDVVRIVLHVGLGTFWPVTAATLAGH 234
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E +D T + K R+V++GTT +R LET + +G + + I
Sbjct: 235 PMHAESYEVDPATWARIEGAK----RVVAIGTTVVRTLETVA----LTGELAGESRLLIA 286
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PG+R + VD +++NFH P+STL+ LV+A G + +++Y A++ YRF S+GD L+
Sbjct: 287 PGFRLQVVDTVLTNFHQPRSTLIALVAAMVG-DRWRELYSVALAEGYRFLSFGDAMLV 343
>gi|261837818|gb|ACX97584.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori 51]
Length = 345
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 127/361 (35%), Positives = 195/361 (54%), Gaps = 29/361 (8%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D+DLP IA P+ P++ A+L+V I+ + F N +V N
Sbjct: 6 LESYDYDLPKELIANYPILPKEKAKLLVYERRSQK---ITHTTFEQVLDFFPKNALVVLN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKVI A+L G + + + E+ H N+ + IK GD + F
Sbjct: 63 DTKVIKARLFGSKHAFLPSKTTEV--FFHRFFKDNTALTQIKGK--IKVGDKIFF----- 113
Query: 123 QSRLEATVIDKWNTGEILLVF-----SISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+ A V++ + G+ L+ F ++ + + + G +PLPPYI KR ++ D
Sbjct: 114 DANYHAEVLELLHNGQRLIAFYDNKTPLNQANILKLLEQHGHMPLPPYI--KRADESLDT 171
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
+YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+ +D +
Sbjct: 172 HEYQSVFAKHMGAVAAPTASLHFSQNTLEKLLK-DFKHAFLTLHVGAGTFLGVETKDIRE 230
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINP-WSGFT-NI 295
H +H+EI I + + L + I+ +GTT+LR +E + NP F +I
Sbjct: 231 HQIHTEILRIPKKSQEIL----QKSQEILCIGTTALRSVEYFKR---LKNPNQEAFECDI 283
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
F+ V+ L++NFHLPKS+LLMLVSA G+E+TK++YQ AI YRFYSYGD L
Sbjct: 284 FLHLANPILHVNYLLTNFHLPKSSLLMLVSAMIGLEKTKEIYQIAIEKKYRFYSYGDGML 343
Query: 356 L 356
+
Sbjct: 344 I 344
>gi|260171863|ref|ZP_05758275.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. D2]
Length = 417
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 131/416 (31%), Positives = 206/416 (49%), Gaps = 81/416 (19%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ E+++ LP RIA P+ RD ++L++ +S+ + + LP +L ++FN
Sbjct: 21 ISEYNYPLPDERIAKFPLPTRDQSKLLIYRRG-----EVSEDIFTSLPEYLPQGSLMIFN 75
Query: 63 NTKVITAQLNGVR--------FC---------HINRREKEISCTLHMRVSPNSWSVYARP 105
NTKVI A+L+ + FC +N ++ E + L M + W
Sbjct: 76 NTKVIQARLHFRKETGALIEVFCLEPIQPNDYALNFQQTEHAAWLCMIGNLKKWKDGELK 135
Query: 106 SKVIKKGDILHFFSQDGQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPP 164
++ KG + + G+ + + +D W+ E+ + + I + + G +P+PP
Sbjct: 136 REMTVKGFPITLTAVRGECKGTSHWVDFSWDNPEV----TFADI-----LEVFGELPIPP 186
Query: 165 YIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
Y+ R + D YQT Y+KI+GSVAAPTAGLHFT +L L GI + +TLHVGA
Sbjct: 187 YLNRD--TEESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALQEKGIDLEELTLHVGA 244
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET------ 278
GTF PVK E+ + H MH+E ++ T + L G ++VGTTS+R LE+
Sbjct: 245 GTFKPVKSEEIEGHEMHTEYISVNRSTIKKL---IDHDGCAIAVGTTSVRTLESLYHIGV 301
Query: 279 -------ATTEDGIINPWSGF------------------------------TNIFITPGY 301
AT E+ + W + T I I PGY
Sbjct: 302 ILADHPDATEEELHVKQWQPYEKYDQIPPVVALQKILGYLDRNGLEALHTSTQIIIAPGY 361
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+++ V +++NFH P+STLL+LVSAF + +Y +A++H +RF SYGD+SLL
Sbjct: 362 QYKIVKAMVTNFHQPQSTLLLLVSAFVK-GNWRAIYDYALAHDFRFLSYGDSSLLM 416
>gi|300726827|ref|ZP_07060257.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
bryantii B14]
gi|299775940|gb|EFI72520.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
bryantii B14]
Length = 387
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 122/393 (31%), Positives = 186/393 (47%), Gaps = 42/393 (10%)
Query: 1 MMVKEFDFDLPPSRIALRP-----------------VFPRDSARLMVVHP-NLSCPLVIS 42
M + +F F LP +IAL P V RD +LMV+H + + +
Sbjct: 1 MKLSQFKFKLPQDQIALYPHQVEKTIKTSSGEKTFTVTRRDECKLMVLHKKSETIDIFKK 60
Query: 43 DHLVSDLPA----------FLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHM 92
D +D+ + + D V N+TKV A+L G + + + +I L
Sbjct: 61 DSNGNDIQGEYLDFRNVLDYFDDGDTFVLNDTKVFPARLYGTK----EKTDAKIEVFLLR 116
Query: 93 RVSPNS--WSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNT-GEIL-LVFSISGI 148
++ W V P++ I+ G+ L F D + A VID + G L ++
Sbjct: 117 ELNEEMRLWDVLVEPARKIRIGNKLFF---DDSGSMVAEVIDNTTSRGRTLRFLYDSPHE 173
Query: 149 ELERQISLVGTIPLPPYIARKRP---IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLL 205
E ++ + +G PLP Y+ R D D+Q +AK +G+V AP GLHF+ L+
Sbjct: 174 EFKQNLYALGEAPLPRYVIDSREDHHATVDDLDDFQCVFAKNEGAVTAPATGLHFSRELM 233
Query: 206 SRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRI 265
R+ GI F+TLH G G F ++VED H M SE I +N K G R+
Sbjct: 234 KRMEIKGINTAFITLHCGLGNFHDIEVEDLTKHKMDSEQMIIGREACDLVNDTKKAGHRV 293
Query: 266 VSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVS 325
+VGT+ ++ ETA DG + + G+TN FI P Y F D +++NF+ P+STLLM +
Sbjct: 294 CAVGTSVVKATETAVGTDGFLKEYDGWTNKFIFPPYDFGLADSMLANFYHPESTLLMETA 353
Query: 326 AFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
AF G + + Y A+ + Y+F YGD L+
Sbjct: 354 AFGGYDLVMEAYHKALENGYKFGCYGDAMLILN 386
>gi|91070343|gb|ABE11260.1| queuosine biosynthesis protein [uncultured Prochlorococcus marinus
clone HF10-88F10]
Length = 374
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 121/358 (33%), Positives = 187/358 (52%), Gaps = 22/358 (6%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
+D+ L PS IA +P R +RLM+V + +++ +L D ++ NNTK
Sbjct: 17 YDYLLDPSLIASKPSAIRHESRLMIVRNSFLEEDCLTNKFTKNLLDEFREGDLVIVNNTK 76
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNS----WSVYARPSKVIKKGDILHFFSQD 121
V+ A+L + E E + + V S W A+P+K +K L S
Sbjct: 77 VMKARL---------KVELENKTLVELLVLERSHECVWLCLAKPAKKLKINRKLKLKSPL 127
Query: 122 GQS-RLEATVIDKWNTGE-ILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYV 178
Q L +D+ G I +I+ + + + G IPLPPYI ++
Sbjct: 128 AQDINLIVDGVDEETGGRFIKFPENITCLNSMNELLDKYGEIPLPPYIKNSEE-ESFHEK 186
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YA G+VAAPTAGLH + +L+ L G+ + +TLHVG GTF P+ ED +
Sbjct: 187 SYQTEYATNPGAVAAPTAGLHLSKSLIFNLKKKGVIILPITLHVGYGTFKPIDQEDLSNL 246
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT---EDGIINPWSGFTNI 295
+H E ++ + + +K +I+++GTTS+R LE+ + +D I P + + ++
Sbjct: 247 KLHKEWVSVNKEVVEEIKRIKKTDRKIIAIGTTSVRALESCYSYEIDDFI--PIAKYVDL 304
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
I PGY+F+ VD L++NFHLPKS+LL+LVSA G E +Y+ AI +RF+SYGD
Sbjct: 305 VIKPGYKFKVVDGLLTNFHLPKSSLLLLVSAMIGRERLLNLYKKAIKEKFRFFSYGDA 362
>gi|153807380|ref|ZP_01960048.1| hypothetical protein BACCAC_01658 [Bacteroides caccae ATCC 43185]
gi|149129742|gb|EDM20954.1| hypothetical protein BACCAC_01658 [Bacteroides caccae ATCC 43185]
Length = 406
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 132/415 (31%), Positives = 206/415 (49%), Gaps = 81/415 (19%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ E+++ LP RIA P+ RD ++L+V +++ + + LP +L ++FN
Sbjct: 10 ISEYNYPLPDERIAKFPLPVRDQSKLLVYRHG-----EVTEDIFTSLPEYLPKGSLMIFN 64
Query: 63 NTKVITAQLNGVR--------FCH---------INRREKEISCTLHMRVSPNSWSVYARP 105
NTKVI A+L+ + FC +N ++ E + L M + W
Sbjct: 65 NTKVIQARLHFRKETGALIEVFCLEPIQPNDYVLNFQQTEHAAWLCMIGNLKKWKDGTLK 124
Query: 106 SKVIKKGDILHFFSQDGQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPP 164
++ KG + + G+ + + +D WN E+ + + I + + G +P+PP
Sbjct: 125 REMTVKGFPITLTATRGECKGTSHWVDFAWNNPEV----TFADI-----LEVFGELPIPP 175
Query: 165 YIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
Y+ R + D YQT Y+KI+GSVAAPTAGLHFT +L L GI + +TLHVGA
Sbjct: 176 YLNRN--TEESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLEALQEKGIDLEELTLHVGA 233
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET------ 278
GTF PVK E+ + H MH+E ++ T + L G ++VGTTS+R LE+
Sbjct: 234 GTFKPVKSEEIEGHEMHTEYISVNRNTIKKL---IDHDGCAIAVGTTSVRTLESLYHIGV 290
Query: 279 -------ATTEDGIINPWSGF------------------------------TNIFITPGY 301
AT ++ + W + T I I PGY
Sbjct: 291 TLADHPDATEQELHVRQWQPYEKYDQIPPVVSLQKILGYLDRNGLEALHTSTQIIIAPGY 350
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+++ V +++NFH P+STLL+LVSAF + +Y +A+SH +RF SYGD+SLL
Sbjct: 351 QYKIVKAMVTNFHQPQSTLLLLVSAFVK-GNWRTIYDYALSHDFRFLSYGDSSLL 404
>gi|317503918|ref|ZP_07961926.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
salivae DSM 15606]
gi|315664944|gb|EFV04603.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
salivae DSM 15606]
Length = 388
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 123/392 (31%), Positives = 191/392 (48%), Gaps = 43/392 (10%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVHP--------- 33
M + +F F+L ++AL P V RD RLMV+H
Sbjct: 1 MKLSQFKFNLAKEQVALYPHSFTRVFENEDGTKGSFQVTRRDECRLMVLHKRSGQIDMFK 60
Query: 34 -NLSCPLVISDHL-VSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLH 91
+ + ++L ++ + + D +FN+TKV A+L G + + + +I L
Sbjct: 61 KDADGNPIEGEYLDFRNILDYFDKGDTFIFNDTKVFPARLYGTK----EKTDAKIEVFLL 116
Query: 92 MRVSPNS--WSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNT-GEIL-LVFSISG 147
++ W V P++ I+ G+ L FF + G + A VID + G L ++
Sbjct: 117 RELNQEMRLWDVLVEPARKIRIGNKL-FFDETGS--MVAEVIDNTTSRGRTLRFLYDCDH 173
Query: 148 IELERQISLVGTIPLPPYIARKRP---IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNL 204
E +R++ +G PLP Y+ R D VD+QT +AK +G+V AP GLHF+ L
Sbjct: 174 EEFKRELFALGEAPLPRYVIDNRTEPHATPDDLVDFQTVFAKKEGAVTAPATGLHFSREL 233
Query: 205 LSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGR 264
+ R+ GI ++TLH G G F ++VED H M SE IDA +N K G
Sbjct: 234 MKRMEIRGIHDAYLTLHCGLGNFNSIEVEDLTKHKMDSEQMVIDAEACAKVNQAKREGHH 293
Query: 265 IVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLV 324
+++VG + ++ ETA DG++ + G+TN FI P Y F D +++NF+ P STLLM
Sbjct: 294 VLAVGVSVVKATETAVGTDGMLKEYDGWTNKFIFPPYDFHLADSMVANFYHPYSTLLMTT 353
Query: 325 SAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+AF G + + Y A + Y F YGD L+
Sbjct: 354 AAFGGYDAVMECYNLASENGYMFGCYGDALLI 385
>gi|288926585|ref|ZP_06420502.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
buccae D17]
gi|288336662|gb|EFC75031.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
buccae D17]
Length = 393
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 126/397 (31%), Positives = 190/397 (47%), Gaps = 48/397 (12%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVHP--------- 33
M + +F F L +IAL P V R+ +RLMV+H
Sbjct: 1 MKLSQFKFKLSEEQIALYPHTAEHVITRKDGTQSTFHVTRREESRLMVLHKKSERIDMYK 60
Query: 34 --NLSCPLVISDH-----LVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEI 86
PL ++ D+ + D +FN+TKV A+L G + + + +I
Sbjct: 61 TDETGEPLKDAEGRPQYIQFRDIVDYFGDGDTFIFNDTKVFPARLYGTK----EKTDAKI 116
Query: 87 SCTLHMRVSPNS--WSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNT-GEIL-LV 142
L ++ W V P++ I+ G+ L F D S + A VID + G L +
Sbjct: 117 EVFLLRELNEEMRLWDVLVEPARKIRIGNKLFF---DDTSTMVAEVIDNTTSRGRTLRFL 173
Query: 143 FSISGIELERQISLVGTIPLPPYIARKRP---IDARDYVDYQTTYAKIQGSVAAPTAGLH 199
+ S E ++ + +G PLP YI +R D D+QT +AK +G+V AP GLH
Sbjct: 174 YDSSHDEFKQNLYALGESPLPRYIIDRRESHHATPEDMDDFQTVFAKNEGAVTAPATGLH 233
Query: 200 FTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVK 259
F+ LL R+ GI ++TLH G G F ++VED H M SE I A + +N K
Sbjct: 234 FSRELLKRMEIYGINFAYITLHCGLGNFHDIEVEDLTKHKMDSEQMKISAEACKVVNEAK 293
Query: 260 SRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKST 319
G I +VGT+ ++ ETA DG++ + G+TN FI P Y F D +++NF+ P ST
Sbjct: 294 RAGNHICAVGTSVVKATETAVGTDGMLKEFDGWTNKFIFPPYDFGLADCMVANFYHPLST 353
Query: 320 LLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
LLM +AF G + + Y A + Y+F +GD+ L+
Sbjct: 354 LLMSTAAFGGYDMVMECYNRAAADGYKFGCFGDSLLI 390
>gi|189502170|ref|YP_001957887.1| hypothetical protein Aasi_0780 [Candidatus Amoebophilus asiaticus
5a2]
gi|226736728|sp|B3ESF6|QUEA_AMOA5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|189497611|gb|ACE06158.1| hypothetical protein Aasi_0780 [Candidatus Amoebophilus asiaticus
5a2]
Length = 348
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 119/358 (33%), Positives = 180/358 (50%), Gaps = 13/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F F LP IA PV R+ ARLMVVH I DL +L ND +V
Sbjct: 1 MKLSSFKFTLPSKLIASHPVENREDARLMVVHKRTGQ---IEHKTFKDLIDYLGENDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+ K+ ++L G + + E+ + + W P++ I+ G+ L+F
Sbjct: 58 LNDAKIFPSKLYGSK--EKTGAQIEVFLLRELESGEHLWDTLVEPARKIRVGNKLYF--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDARDYV 178
G L A V+D + L F G E + +G +PLP + RK + R+
Sbjct: 113 -GDGELVAEVLDNTTSRGRTLKFLFEGTREEFYEIVDQLGFVPLPNQLKRKPETEDRE-- 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YA+ G+V P AGLHF+++LL RL G+ + +TLH+G + + VED +
Sbjct: 170 RYQTVYAQHIGAVVPPFAGLHFSAHLLKRLELKGVHITPLTLHIGLNSMKIIDVEDLTKY 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
+ SE I T +N+ ++ +VGT++++ LET+ + G + P G+TN I
Sbjct: 230 RIGSEQFLIPDNTVTTVNTALDDKKQVCAVGTSTIKALETSVSVAGRLKPAQGWTNKLIF 289
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
P Y F+ L++NFHLP+S L+ +AF G E + YQ AI YRF+ YGD L+
Sbjct: 290 PPYDFKVCTSLITNFHLPESLPLVNAAAFGGYELMMEAYQIAIKEKYRFFVYGDAMLI 347
>gi|281420090|ref|ZP_06251089.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
copri DSM 18205]
gi|281405890|gb|EFB36570.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
copri DSM 18205]
Length = 424
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 135/436 (30%), Positives = 207/436 (47%), Gaps = 103/436 (23%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++++DLP RIA P+ RD ++L+V +SD + LP +L ++FN
Sbjct: 8 ISDYNYDLPDERIAKFPIAQRDHSKLLVYKHG-----EVSDDVFHHLPTYLPQGALMIFN 62
Query: 63 NTKVITAQLNGVR-------------------------------FCHIN--RREKEISCT 89
NTKVI A+L+ + C I ++ KE S
Sbjct: 63 NTKVIQARLHFRKETGALIEVFLMEPAEPTDYELMFQTTGHCSWLCMIGNLKKWKEGSLK 122
Query: 90 LHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIE 149
+ + ++ S +++GD L +Q ++ T + W + + +
Sbjct: 123 RDFEIKGHKLTL----SATMRRGDALGSEAQKMVAKGGGT--NYW----VDFDWDNDKVS 172
Query: 150 LERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLI 209
+ VG +P+PPY+ RK + D YQT Y+K++GSVAAPTAGLHFT +L L
Sbjct: 173 FAEILEAVGELPIPPYLNRK--TEESDKTTYQTVYSKVKGSVAAPTAGLHFTDAVLKDLD 230
Query: 210 SIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVG 269
+ GI VTLHVGAGTF PVK + + H MH+E + ++L + R+++VG
Sbjct: 231 AHGIDREEVTLHVGAGTFKPVKSLEIEGHQMHTEYIVVH---RRSLEKLIKHECRVIAVG 287
Query: 270 TTSLRLLET-------------ATTEDGIINPWSGF------------------------ 292
TTS+R +E+ A ED +N W +
Sbjct: 288 TTSVRTIESLYYMGVHLLKHPEANEEDLHVNQWDPYELSEDGNLVDGITPMQAIQAIIDY 347
Query: 293 ------------TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHA 340
T I I PGY+++ V +L++NFH P+STLL+LVSAF + KK+Y +A
Sbjct: 348 LDRNGLEALHSSTQIIIAPGYQYKIVKMLVTNFHQPQSTLLLLVSAFLK-GDWKKVYDYA 406
Query: 341 ISHAYRFYSYGDTSLL 356
+SH +RF SYGD+SLL
Sbjct: 407 LSHDFRFLSYGDSSLL 422
>gi|109947703|ref|YP_664931.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter acinonychis str. Sheeba]
gi|123362591|sp|Q17WP4|QUEA_HELAH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|109714924|emb|CAJ99932.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter acinonychis str. Sheeba]
Length = 345
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 126/361 (34%), Positives = 198/361 (54%), Gaps = 29/361 (8%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D+ LP IA P+ P++ A+L++ + I+ + F N +V N
Sbjct: 6 LESYDYHLPKELIANYPILPKEKAKLLIYERHSQK---ITHTTFEHVLDFFPKNTLVVLN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKVI A+L G ++ + + E+ R N+ ++ K IK GD + FF ++
Sbjct: 63 DTKVIKARLFGSKYAFLPSKTTEV---FFHRFLKNNTALTQIKGK-IKVGDKI-FFDENH 117
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQ-----ISLVGTIPLPPYIARKRPIDARDY 177
A V++ N G+ L+ F + L++ + G +PLPPYI KR ++ D
Sbjct: 118 Y----AEVLELLNNGQRLIAFYDNKTPLDQASILKLLEQYGHMPLPPYI--KRADESLDT 171
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
++YQ+ +AK G+VAAPTA LHF+ N L L+ K F+TLHVGAGTF V+ +D +
Sbjct: 172 LEYQSVFAKHIGAVAAPTASLHFSQNTLENLLK-DFKHTFLTLHVGAGTFASVETKDIRE 230
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINP-WSGFT-NI 295
H +H+E+ I + + L + I+ +GTT+LR +E + P F +I
Sbjct: 231 HQIHTEVLHIPKKSQEILQ----KSQEILCIGTTALRSVEYFKR---LKTPKQEAFECDI 283
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
F+ + + L++NFHLPKS+LLMLVSA G+E+TK++YQ AI YRFYSYGD L
Sbjct: 284 FLHLANPIQHANYLLTNFHLPKSSLLMLVSAMIGLEKTKEIYQIAIEKKYRFYSYGDGML 343
Query: 356 L 356
+
Sbjct: 344 I 344
>gi|315920175|ref|ZP_07916415.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. D2]
gi|313694050|gb|EFS30885.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. D2]
Length = 406
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 131/416 (31%), Positives = 206/416 (49%), Gaps = 81/416 (19%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ E+++ LP RIA P+ RD ++L++ +S+ + + LP +L ++FN
Sbjct: 10 ISEYNYPLPDERIAKFPLPTRDQSKLLIYRRG-----EVSEDIFTSLPEYLPQGSLMIFN 64
Query: 63 NTKVITAQLNGVR--------FC---------HINRREKEISCTLHMRVSPNSWSVYARP 105
NTKVI A+L+ + FC +N ++ E + L M + W
Sbjct: 65 NTKVIQARLHFRKETGALIEVFCLEPIQPNDYALNFQQTEHAAWLCMIGNLKKWKDGELK 124
Query: 106 SKVIKKGDILHFFSQDGQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPP 164
++ KG + + G+ + + +D W+ E+ + + I + + G +P+PP
Sbjct: 125 REMTVKGFPITLTAVRGECKGTSHWVDFSWDNPEV----TFADI-----LEVFGELPIPP 175
Query: 165 YIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
Y+ R + D YQT Y+KI+GSVAAPTAGLHFT +L L GI + +TLHVGA
Sbjct: 176 YLNRD--TEESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALQEKGIDLEELTLHVGA 233
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET------ 278
GTF PVK E+ + H MH+E ++ T + L G ++VGTTS+R LE+
Sbjct: 234 GTFKPVKSEEIEGHEMHTEYISVNRSTIKKL---IDHDGCAIAVGTTSVRTLESLYHIGV 290
Query: 279 -------ATTEDGIINPWSGF------------------------------TNIFITPGY 301
AT E+ + W + T I I PGY
Sbjct: 291 ILADHPDATEEELHVKQWQPYEKYDQIPPVVALQKILGYLDRNGLEALHTSTQIIIAPGY 350
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+++ V +++NFH P+STLL+LVSAF + +Y +A++H +RF SYGD+SLL
Sbjct: 351 QYKIVKAMVTNFHQPQSTLLLLVSAFVK-GNWRAIYDYALAHDFRFLSYGDSSLLM 405
>gi|302345240|ref|YP_003813593.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella melaninogenica ATCC 25845]
gi|302149702|gb|ADK95964.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella melaninogenica ATCC 25845]
Length = 394
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 123/398 (30%), Positives = 196/398 (49%), Gaps = 49/398 (12%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVH---------- 32
M + +F F+LP ++AL P V RD RLMV+H
Sbjct: 1 MKLSQFKFNLPKEQVALYPHSSERVLTRTDGSTQTFTVTRRDEGRLMVLHRKSGKIDMFK 60
Query: 33 PNLSCPLVISDHL-VSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLH 91
++ D++ D+ + + DA +FN+TKV A+L G + + + +I L
Sbjct: 61 GEINGEPKEEDYIRFKDVFNYFDEGDAFIFNDTKVFPARLYGTK----EKTDAKIEVFLL 116
Query: 92 MRVSPNS--WSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNT-GEIL-LVFSISG 147
++ W V P++ I+ G+ L FF + G + A VID + G L ++
Sbjct: 117 RELNQEMRLWDVLVEPARKIRIGNKL-FFDESGT--MVAEVIDNTTSRGRTLRFLYDCPH 173
Query: 148 IELERQISLVGTIPLPPYIARKRPID---------ARDYVDYQTTYAKIQGSVAAPTAGL 198
E +R++ +G PLP YI RP + A D +Q+ +AK +G+V+AP +
Sbjct: 174 DEFKRELFALGEAPLPRYIIDNRPKEDGEEFAHATADDMEHFQSVFAKNEGAVSAPGTNI 233
Query: 199 HFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSV 258
HF+ +++ + GIK F+TLH G G F ++VED H M SE I+A + N
Sbjct: 234 HFSEHMMKMMDIKGIKKAFITLHCGLGNFHDIEVEDLTKHKMDSEEMHINADACRIANGA 293
Query: 259 KSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKS 318
K G R+ +VG + ++ ETA DG++ + G+TN FI P Y F D ++ NF+ P S
Sbjct: 294 KQAGHRLCAVGASVVKATETAVGTDGMLKEYDGWTNEFIFPPYNFGFADSMLVNFYHPYS 353
Query: 319 TLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
TLLM +AF G + + Y A+ + Y F +GD+ L+
Sbjct: 354 TLLMETAAFGGYDLVMEAYDKAVKNGYMFGCFGDSLLI 391
>gi|308061736|gb|ADO03624.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori Cuz20]
Length = 345
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 124/359 (34%), Positives = 194/359 (54%), Gaps = 25/359 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D+DLP IA P+ P++ A+L+V I+ + F N +V N
Sbjct: 6 LESYDYDLPKELIANYPILPKEKAKLLVYERRSQK---ITHTTFEHVLDFFPKNALVVLN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKVI A+L G + + + E+ H N+ + IK GD + F
Sbjct: 63 DTKVIKARLFGSKHAFLPSKTTEV--FFHRFFKDNTALTQIKGK--IKVGDKIFF----- 113
Query: 123 QSRLEATVIDKWNTGEILLVF-----SISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+ A V++ + G+ L+ F ++ + + + G +PLPPYI KR ++ D
Sbjct: 114 DANYHAEVLELLHNGQRLIAFYGNKTPLNQANILKLLEQYGHMPLPPYI--KRADESLDT 171
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
+YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+ +D +
Sbjct: 172 HEYQSVFAKHMGAVAAPTASLHFSQNTLEKLLK-DFKHAFLTLHVGAGTFLGVETKDIRE 230
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H +H+E+ I + + L + I+ +GTT+LR +E + N + +IF+
Sbjct: 231 HQIHTEVLRIPKKSQEILQKTQE----ILCIGTTALRSVEYFKRLENP-NQEAFECDIFL 285
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
V+ L++NFHLPKS+LLMLVSA G+E+TK++YQ AI YRFYSYGD L+
Sbjct: 286 HLANPILHVNYLLTNFHLPKSSLLMLVSAMIGLEKTKEIYQIAIEKKYRFYSYGDGMLI 344
>gi|288803047|ref|ZP_06408483.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
melaninogenica D18]
gi|288334564|gb|EFC73003.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
melaninogenica D18]
Length = 394
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 123/398 (30%), Positives = 196/398 (49%), Gaps = 49/398 (12%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVH---------- 32
M + +F F+LP ++AL P V RD RLMV+H
Sbjct: 1 MKLSQFKFNLPKEQVALYPHSSERVLTRTDGSTQTFTVTRRDEGRLMVLHRKSGKIDMFK 60
Query: 33 PNLSCPLVISDHL-VSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLH 91
++ D++ D+ + + DA +FN+TKV A+L G + + + +I L
Sbjct: 61 GEINGEPKEEDYIRFKDVFNYFDEGDAFIFNDTKVFPARLYGTK----EKTDAKIEVFLL 116
Query: 92 MRVSPNS--WSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNT-GEIL-LVFSISG 147
++ W V P++ I+ G+ L FF + G + A VID + G L ++
Sbjct: 117 RELNQEMRLWDVLVEPARKIRIGNKL-FFDESGT--MVAEVIDNTTSRGRTLRFLYDCPH 173
Query: 148 IELERQISLVGTIPLPPYIARKRPID---------ARDYVDYQTTYAKIQGSVAAPTAGL 198
E +R++ +G PLP YI RP + A D +Q+ +AK +G+V+AP +
Sbjct: 174 DEFKRELFTLGEAPLPRYIIDNRPKEEGEEFAHATADDMEHFQSVFAKNEGAVSAPGTNI 233
Query: 199 HFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSV 258
HF+ +++ + GIK F+TLH G G F ++VED H M SE I+A + N
Sbjct: 234 HFSEHMMKMMDIKGIKKAFITLHCGLGNFHDIEVEDLTKHKMDSEEMHINADACRIANGA 293
Query: 259 KSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKS 318
K G R+ +VG + ++ ETA DG++ + G+TN FI P Y F D ++ NF+ P S
Sbjct: 294 KQAGHRLCAVGASVVKATETAVGTDGMLKEYDGWTNEFIFPPYNFGFADSMLVNFYHPYS 353
Query: 319 TLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
TLLM +AF G + + Y A+ + Y F +GD+ L+
Sbjct: 354 TLLMETAAFGGYDLVMEAYDKAVKNGYMFGCFGDSLLI 391
>gi|189463178|ref|ZP_03011963.1| hypothetical protein BACCOP_03889 [Bacteroides coprocola DSM 17136]
gi|189430157|gb|EDU99141.1| hypothetical protein BACCOP_03889 [Bacteroides coprocola DSM 17136]
Length = 405
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 131/415 (31%), Positives = 207/415 (49%), Gaps = 81/415 (19%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++++ LP RIA P+ RD ++L+V +S+ + + LP ++ +VFN
Sbjct: 9 ISDYNYPLPDERIAKFPLPVRDQSKLLVYRHG-----EVSETVFTSLPDYMEPGMLMVFN 63
Query: 63 NTKVITAQLNGVR--------FCH---------INRREKEISCTLHMRVSPNSWSVYARP 105
NTKVI A+L+ + FC +N ++ + L M + W
Sbjct: 64 NTKVIQARLHFRKETGALIEIFCLEPIQPNDYVLNFQQTHHAAWLCMIGNLKKWKEGPLH 123
Query: 106 SKVIKKGDILHFFSQDGQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPP 164
++ KG + + G+ + +D W+ E+ + + I + + G +P+PP
Sbjct: 124 KEMTVKGKTITLTATRGECHGTSHWVDFTWDNPEV----TFADI-----LEVFGELPIPP 174
Query: 165 YIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
Y+ R+ D YQT Y+KI+GSVAAPTAGLHFT +L+ L G+ + VTLHVGA
Sbjct: 175 YLDRE--TQESDKETYQTVYSKIKGSVAAPTAGLHFTERVLASLKEKGVDLEEVTLHVGA 232
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET------ 278
GTF PVK E+ + H MH+E ++ T + L + + G V+VGTTS+R LE+
Sbjct: 233 GTFKPVKSEEIEGHEMHTEYISVNKSTIEKLIAHR---GEAVAVGTTSVRTLESLYYIGV 289
Query: 279 -------ATTEDGIINPWSGF------------------------------TNIFITPGY 301
A+ E+ + W + T I I PGY
Sbjct: 290 TISQNPDASQEELHVKQWQPYESDVTLSTIESLQCILDYMNRHNLDALHTSTQIIIAPGY 349
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
++ V +++NFH P+STLL+LVSAF + K+Y +A++H +RF SYGD+SLL
Sbjct: 350 EYKIVKRMVTNFHQPQSTLLLLVSAFVK-GDWHKIYDYALAHDFRFLSYGDSSLL 403
>gi|188527195|ref|YP_001909882.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori Shi470]
gi|238691904|sp|B2USM0|QUEA_HELPS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|188143435|gb|ACD47852.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori Shi470]
Length = 345
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 123/359 (34%), Positives = 194/359 (54%), Gaps = 25/359 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D+DLP IA P+ P++ A+L+V I+ + F N +V N
Sbjct: 6 LESYDYDLPKELIANYPILPKEKAKLLVYERRSQK---ITHTTFEHVLDFFPKNALVVLN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKVI A++ G + + + E+ H N+ + IK GD + F
Sbjct: 63 DTKVIKARIFGSKHAFLPSKTTEV--FFHRFFKDNTALTQIKGK--IKVGDKIFF----- 113
Query: 123 QSRLEATVIDKWNTGEILLVF-----SISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+ A V++ + G+ L+ F ++ + + + G +PLPPYI KR ++ D
Sbjct: 114 DAHYHAEVLELLHNGQRLIAFYGNKTPLNQANILKLLEQYGHMPLPPYI--KRADESLDA 171
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
+YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+ +D +
Sbjct: 172 HEYQSVFAKHMGAVAAPTASLHFSQNTLEKLLK-DFKHAFLTLHVGAGTFLGVETKDIRE 230
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H +H+E+ I + + L + I+ +GTT+LR +E + N + +IF+
Sbjct: 231 HQIHTEVLRIPKKSQEIL----QKSQEILCIGTTALRSVEYFKRLENP-NQEAFECDIFL 285
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
V+ L++NFHLPKS+LLMLVSA G+E+TK++YQ AI YRFYSYGD L+
Sbjct: 286 HLANPILHVNYLLTNFHLPKSSLLMLVSAMVGLEKTKEIYQIAIEKKYRFYSYGDGMLI 344
>gi|317180719|dbj|BAJ58505.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori F32]
Length = 345
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 125/359 (34%), Positives = 194/359 (54%), Gaps = 25/359 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D+DLP IA P+ P++ A+L+V I+ + F N +V N
Sbjct: 6 LESYDYDLPKELIANYPILPKEKAKLLVYERRSQK---ITHTTFEHVLDFFPKNALVVLN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKVI A+L G + + + E+ H N+ + IK GD + F
Sbjct: 63 DTKVIKARLFGSKHAFLPSKTTEV--FFHRFFKDNTALTQIKGK--IKVGDKIFF----- 113
Query: 123 QSRLEATVIDKWNTGEILLVF-----SISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+ A V++ + G+ L+ F ++ + + + G +PLPPYI KR ++ D
Sbjct: 114 DAHYYAEVLELLHNGQRLIAFYGNKTPLNQANILKLLEQYGHMPLPPYI--KRADESLDA 171
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
+YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+ +D +
Sbjct: 172 HEYQSVFAKHMGAVAAPTASLHFSQNTLEKLLK-DFKHAFLTLHVGAGTFLGVETKDIRE 230
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H +H+E+ I + + L + I+ VGTT+LR +E + N + +IF+
Sbjct: 231 HQIHTEVLRIPKKSQEIL----QKSQEILCVGTTALRSVEYFKRLENP-NQEAFECDIFL 285
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
V+ L++NFHLPKS+LLMLVSA G+E+TK++YQ AI YRFYSYGD L+
Sbjct: 286 HLANPILHVNHLLTNFHLPKSSLLMLVSAMVGLEKTKEIYQIAIEKKYRFYSYGDGMLI 344
>gi|283954143|ref|ZP_06371668.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni 414]
gi|283794422|gb|EFC33166.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni 414]
Length = 342
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 136/364 (37%), Positives = 196/364 (53%), Gaps = 33/364 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+++ +D+ LP IA P P++ ARL+V + I +L FL N AI
Sbjct: 5 LLLSNYDYTLPNKLIANYPANPKEDARLLVFNRKNK---QIFHTTFKNLQDFL-PNCAIF 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMR-VSPNSWSVYARPSKVIKKGDILHFFS 119
FN+TKVI A++ G + +I LH ++ S + +KK +ILHF
Sbjct: 61 FNDTKVIKARIYGNK-----ASGGKIELFLHQPFLNSKSPLFLVQIKGRVKKDEILHF-- 113
Query: 120 QDGQSRLEATVIDKWNTGEILLVFS-----ISGIELERQISLVGTIPLPPYIARKRPIDA 174
+ L+A +++ + G + F + L + +G IPLPPYI KR +
Sbjct: 114 ---KQNLKAQIVELLDDGLRKVQFFQNDKILDTSNLYNLLDKIGHIPLPPYI--KREDEK 168
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D DYQ+ +AK G+VAAPTA LHF+ +L L ++Y +TLHVGAGTF V+ E+
Sbjct: 169 SDLKDYQSIFAKNLGAVAAPTASLHFSKTMLENLRKKH-EIYHLTLHVGAGTFKSVECEN 227
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFT 293
+H MHSE F + P QA + S+ I+ VGTT R +E A T+ SGF
Sbjct: 228 IQEHKMHSE--FFNIP-QQACEIIDSKQA-ILGVGTTVTRTIEYYARTKTK-----SGFC 278
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
++F+ P + + L++NFHLPKSTL+MLVSAF G E+ K+Y+ AI YRFYSYGD
Sbjct: 279 DLFLYPQNQPIRQNHLLTNFHLPKSTLIMLVSAFIGREQCLKLYELAIKEKYRFYSYGDA 338
Query: 354 SLLF 357
L+
Sbjct: 339 MLIL 342
>gi|325269367|ref|ZP_08135984.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
multiformis DSM 16608]
gi|324988288|gb|EGC20254.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
multiformis DSM 16608]
Length = 394
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 123/398 (30%), Positives = 195/398 (48%), Gaps = 49/398 (12%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVH---------- 32
M + +F F+LP ++AL P V RD RLM++H
Sbjct: 1 MKLSQFKFNLPKEQVALYPHSSDRVLTRSDGSTQTFTVTRRDEGRLMILHRKSGRIDMFK 60
Query: 33 PNLSCPLVISDHL-VSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLH 91
++ D + D+ + + DA +FN+TKV A+L G + + + +I L
Sbjct: 61 GDVKGEPKEEDFIRFKDVLDYFDEGDAFIFNDTKVFPARLYGTK----EKTDAKIEVFLL 116
Query: 92 MRVSPNS--WSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNT-GEIL-LVFSISG 147
++ W V P++ I+ G+ L FF + G + A VID + G L ++
Sbjct: 117 RELNQEMRLWDVLVEPARKIRIGNKL-FFDESGT--MVAEVIDNTTSRGRTLRFLYDCPH 173
Query: 148 IELERQISLVGTIPLPPYIARKRPID---------ARDYVDYQTTYAKIQGSVAAPTAGL 198
E +R++ +G PLP YI RP + A D ++Q+ +AK +G+V+AP +
Sbjct: 174 DEFKRELYALGEAPLPRYIIDNRPKEKGAEFAHASADDMENFQSVFAKNEGAVSAPGTNI 233
Query: 199 HFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSV 258
HF+ ++ + GIK F+TLH G GTF ++VED H M SE I+A + N
Sbjct: 234 HFSEQMMKMMDIRGIKKAFITLHCGLGTFHDIEVEDLTKHKMDSEEMHINADACRIANGA 293
Query: 259 KSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKS 318
K G + +VG + ++ ETA DG++ + G+TN FI P Y F D ++ NF+ P S
Sbjct: 294 KQAGHHLCAVGASVVKATETAVGTDGMMKEYDGWTNEFIFPPYNFGFADSMLVNFYHPYS 353
Query: 319 TLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
TLLM +AF G E + Y A+ + Y F +GD+ L+
Sbjct: 354 TLLMETAAFGGYELVMEAYDKAVKNGYMFGCFGDSLLI 391
>gi|308182554|ref|YP_003926681.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori PeCan4]
gi|308064739|gb|ADO06631.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori PeCan4]
Length = 345
Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 124/359 (34%), Positives = 194/359 (54%), Gaps = 25/359 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D+DLP IA P+ P++ A+L+V I+ + F N +V N
Sbjct: 6 LESYDYDLPKELIANYPILPKEKAKLLVYERRSQK---ITHTTFEHVLDFFPKNALVVLN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKVI A+L G + + + E+ H N+ + IK GD + F
Sbjct: 63 DTKVIKARLFGSKHAFLPSKTTEV--FFHRFFKDNTALTQIKGK--IKVGDKIFF----- 113
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQ-----ISLVGTIPLPPYIARKRPIDARDY 177
+ A V++ + G+ L+ F + L ++ + G +PLPPYI KR ++ D
Sbjct: 114 DAHYHAEVLELLHNGQRLIAFYGNKTPLNQENILKLLEQYGHMPLPPYI--KRADESLDT 171
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
+YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+ +D +
Sbjct: 172 HEYQSVFAKHIGAVAAPTASLHFSQNTLEKLLK-DFKHAFLTLHVGAGTFLSVETKDIRE 230
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H +H+E+ I + + L I+ +GTT+LR +E + N + +IF+
Sbjct: 231 HQIHTEVLRIPKKSQEILQE----SQEILCIGTTALRSVEYFKRLENP-NQEAFECDIFL 285
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ V+ L++NFHLPKS+LLMLVSA G+E+TK++Y+ AI YRFYSYGD L+
Sbjct: 286 HLANPIQHVNYLLTNFHLPKSSLLMLVSAMIGLEKTKEIYKIAIEKKYRFYSYGDGMLI 344
>gi|328955738|ref|YP_004373071.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Coriobacterium glomerans PW2]
gi|328456062|gb|AEB07256.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Coriobacterium glomerans PW2]
Length = 403
Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 127/408 (31%), Positives = 196/408 (48%), Gaps = 64/408 (15%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLV-------ISDHLVSDLPAFL 53
M +FD+DLP IA PV PRDS R++V+H ++ I SD+ +L
Sbjct: 1 MRTDDFDYDLPEELIAQAPVEPRDSCRMLVMHRRVASAAAAADARGDIEHRRFSDIIDYL 60
Query: 54 NSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN------SWSVYARPSK 107
D +V N T+V+ A+L G + R ++ TL ++ + W P +
Sbjct: 61 APGDLLVANETRVMPARLVGTK-----RETGGVAETLLLKRREDLDALGSVWECLVSPGR 115
Query: 108 VIKKGDILHFFSQDGQSRLEA--------TVIDKWNTGEILLVFSISGIE-------LER 152
++ G ++ + + + ++A + + G L+ F G E L+
Sbjct: 116 RLRPGSVIEYRAGGLHAPVQAPPVLIGQIEAFVENSKGGRLVRFHPVGSEALDGPCTLDA 175
Query: 153 QISLVGTIPLPPYIARKRPIDARDYVDYQTTYA-KIQGSVAAPTAGLHFTSNLLSRLISI 211
I G +PLPPYI D +YQT Y+ + + S AAPTAGLHFT L+ RL +
Sbjct: 176 AIHAAGHVPLPPYITSYEG----DPENYQTVYSMREEHSAAAPTAGLHFTEELIDRLRAK 231
Query: 212 GIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTT 271
G+ V L VG TF V+ +D DH+MH+E + A +A+ + K+ GGR+V+VGTT
Sbjct: 232 GVGWKTVELEVGIDTFRLVQEDDPTDHVMHTERYHVSADVIEAVRATKAGGGRVVAVGTT 291
Query: 272 SLRLLETA--------------------------TTEDGIINPWSGFTNIFITPGYRFRA 305
++R LE+A ++ T++++ PG F
Sbjct: 292 AVRSLESAFDTMRPASQPPVVARLFENAPDSAAVCCAGDLVERRDATTSLYLMPGSTFHV 351
Query: 306 VDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
VD L++NFH+P+STL+MLVSAF E+ Y A+ YRF S+GD
Sbjct: 352 VDALITNFHVPRSTLMMLVSAFASREQIMDAYAQAVRERYRFLSFGDA 399
>gi|281423716|ref|ZP_06254629.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
oris F0302]
gi|299141219|ref|ZP_07034356.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
oris C735]
gi|281402268|gb|EFB33099.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
oris F0302]
gi|298577179|gb|EFI49048.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
oris C735]
Length = 388
Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 124/392 (31%), Positives = 189/392 (48%), Gaps = 43/392 (10%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVHP--------- 33
M + +F F+L ++AL P V RD RLMV+H
Sbjct: 1 MKLSQFKFNLAEEQVALYPHSFTRVFENEDGTKDSFQVTRRDECRLMVLHKRSGQIEMFK 60
Query: 34 --NLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLH 91
+ P+ ++ + D +FN+TKV A+L G + + + +I L
Sbjct: 61 KDSKGNPIEGEYLDFRNILDYFGEGDTFIFNDTKVFPARLYGTK----EKTDAKIEVFLL 116
Query: 92 MRVSPNS--WSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNT-GEIL-LVFSISG 147
++P W V P++ I+ G+ L FF + G + A VID + G L ++
Sbjct: 117 RELNPEMRLWDVLVEPARKIRIGNKL-FFDETGT--MVAEVIDNTTSRGRTLRFLYDCDH 173
Query: 148 IELERQISLVGTIPLPPYI--ARKRP-IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNL 204
E +R++ +G PLP YI R+ P D D+QT +AK +G+V AP GLHF+ L
Sbjct: 174 EEFKRELFALGEAPLPRYIIDNREEPHATPEDLEDFQTVFAKNEGAVTAPATGLHFSREL 233
Query: 205 LSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGR 264
+ R+ GI ++TLH G G F ++VED H M SE + A Q +N K
Sbjct: 234 MKRMEIRGIHDAYITLHCGLGNFNSIEVEDLTKHKMDSEQMIVSAEACQRVNQTKRERHH 293
Query: 265 IVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLV 324
+++VG + ++ ETA DG++ + G+TN FI P Y F D +++NF+ P STLLM
Sbjct: 294 VLAVGVSVVKATETAVGTDGMLKEYDGWTNKFIFPPYDFDLADSMVANFYHPYSTLLMTT 353
Query: 325 SAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+AF G E + Y A + Y F YGD L+
Sbjct: 354 AAFGGYEAVMECYNLAAENGYMFGCYGDALLI 385
>gi|218515259|ref|ZP_03512099.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhizobium
etli 8C-3]
Length = 128
Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 86/126 (68%), Positives = 100/126 (79%)
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
DTDDH MH E G++ A A LN+VK+RGGRIV VGTTSLRL+E+A EDG I W+G T
Sbjct: 1 DTDDHKMHLESGYVSAEIAARLNAVKARGGRIVCVGTTSLRLIESAAGEDGKIKHWAGAT 60
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFITPGYRF+AVD+LM+NFHLP+STL MLVSAF G E + Y+HAIS YRFYSYGD
Sbjct: 61 GIFITPGYRFKAVDMLMTNFHLPRSTLFMLVSAFSGFETMRAAYEHAISTGYRFYSYGDA 120
Query: 354 SLLFQK 359
SLLF+K
Sbjct: 121 SLLFRK 126
>gi|268680076|ref|YP_003304507.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Sulfurospirillum deleyianum DSM 6946]
gi|268618107|gb|ACZ12472.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Sulfurospirillum deleyianum DSM 6946]
Length = 308
Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 122/310 (39%), Positives = 175/310 (56%), Gaps = 28/310 (9%)
Query: 52 FLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKK 111
FL + ++ N+T+V+ A++ G + EI L+ + N +SVY + +KK
Sbjct: 21 FLPEDIGVLLNDTRVVKARIFGKK-----ESGGEIELLLNAPLQENLYSVYIKGR--VKK 73
Query: 112 GDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQ-----ISLVGTIPLPPYI 166
G L FF D LEA +I+ G L+ F L + + ++G IPLPPYI
Sbjct: 74 GMRL-FFDAD----LEAELIELKEDGTRLVAFFRKNEALHTKALFDILEIIGHIPLPPYI 128
Query: 167 ARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGT 226
KR D VDYQT +AK QG+VAAPTA LHFT ++ L + +F+TLHVGAGT
Sbjct: 129 --KREDQEEDSVDYQTVFAKEQGAVAAPTASLHFTDSMFEALKK-RYETHFLTLHVGAGT 185
Query: 227 FMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII 286
F PV+ E +H+MHSEI I T + + S K +++VGTT R +E
Sbjct: 186 FKPVEAEHILEHVMHSEIYTIPELTCKLIESKKP----LLAVGTTVTRTVEYYAR----T 237
Query: 287 NPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYR 346
N G ++F+ P V+ L++NFHLPKSTL+MLV++F GIE+T ++Y+ A+ YR
Sbjct: 238 NIPVGKCDLFLHPNNPPLRVNHLLTNFHLPKSTLIMLVASFIGIEKTLELYEEAVKEKYR 297
Query: 347 FYSYGDTSLL 356
F+SYGD L+
Sbjct: 298 FFSYGDAMLI 307
>gi|154493611|ref|ZP_02032931.1| hypothetical protein PARMER_02951 [Parabacteroides merdae ATCC
43184]
gi|154086821|gb|EDN85866.1| hypothetical protein PARMER_02951 [Parabacteroides merdae ATCC
43184]
Length = 427
Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 131/409 (32%), Positives = 203/409 (49%), Gaps = 66/409 (16%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+++FD+ LP RIA P+ RD ++L++ +S+ + + +L +VFN
Sbjct: 31 IEDFDYPLPDERIAKFPLPKRDESKLLLYKEG-----KVSESIFKHITDYLPEGSLMVFN 85
Query: 63 NTKVITAQL-----NGVR---FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NT+VI A+L G + FC + E + + W+ K K+G +
Sbjct: 86 NTRVIQARLLFQKETGAKIEIFC-LEPVEPHDYALVFQQTECCRWTCLVGNLKKWKEGLL 144
Query: 115 LHFFSQDGQSR-LEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPI 172
DG++ L+A + ++ + + G +P+PPY+ R+
Sbjct: 145 KKEVQLDGETVILKAEKLQTCGDSYLIEFTWDHPTCTFADLLDAAGVLPIPPYLNRE--T 202
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+ D YQT Y+KI+GSVAAPTAGLHFT +L+ + ++GI +TLHVGAGTF PVK
Sbjct: 203 EKSDLQTYQTVYSKIKGSVAAPTAGLHFTPEVLAAIDALGIGREELTLHVGAGTFKPVKS 262
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-------------A 279
E + H MH+E FI + ++ +K+ G+I++VGTTS+R LE+ A
Sbjct: 263 ETIEGHEMHTE--FISVRRS-SIERIKNNLGKIIAVGTTSVRTLESLYYMGVTLASNPDA 319
Query: 280 TTEDGIINPWSGF-------------------------------TNIFITPGYRFRAVDI 308
T ++ I+ W + T I I PGY F+ V
Sbjct: 320 TADELIVKQWMPYEETNNRLTADEALQNILDYLDRHQADKLVTATRIIIAPGYEFKIVRG 379
Query: 309 LMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+++NFH PKSTLL+L+SAF K +Y +A+ H +RF SYGD+SLL
Sbjct: 380 IVTNFHQPKSTLLLLISAFVK-GNWKNIYDYALRHDFRFLSYGDSSLLL 427
>gi|157412818|ref|YP_001483684.1| queuosine biosynthesis protein [Prochlorococcus marinus str. MIT
9215]
gi|238686829|sp|A8G3B7|QUEA_PROM2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|157387393|gb|ABV50098.1| Queuosine biosynthesis protein [Prochlorococcus marinus str. MIT
9215]
Length = 374
Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 123/362 (33%), Positives = 189/362 (52%), Gaps = 24/362 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D+ L PS IA +P R +RLM+V ++ +++ +L D +V N
Sbjct: 14 LEAYDYFLDPSLIASKPCAIRHESRLMIVRNSVLEENCLTNKFTKNLLDEFRKGDLLVVN 73
Query: 63 NTKVITA----QLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
NTKV+ A QL + E+ C W A+P+K +K +
Sbjct: 74 NTKVMKARLKVQLENRTLVELLVLERSHECV---------WLCLAKPAKKLKINRKIILK 124
Query: 119 SQDGQS-RLEATVIDKWNTGEILLVFSISGIELERQISLV---GTIPLPPYIARKRPIDA 174
S Q L +D+ TG + F + +L L+ G IPLPPYI ++
Sbjct: 125 SPYAQDINLMVDGVDE-ETGGRFIKFPENITDLNSMNDLLNKYGEIPLPPYIKNSEE-ES 182
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
YQT YA G+VAAPTAGLH + +L+S L G+ + +TLHVG GTF P+ ED
Sbjct: 183 FHEKSYQTEYATNPGAVAAPTAGLHLSKSLISNLKKKGVIILPITLHVGYGTFKPIDQED 242
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN---PWSG 291
+ +H E ++ + + +K +I+++GTTS+R LE+ + + IN P +
Sbjct: 243 LSNLKLHKEWVSVNEEVVEEIKRIKKTDRKIIAIGTTSVRALESCYSHE--INDYVPIAK 300
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
+ ++ I PGY+F+ VD L++NFHLPKS+LL+LVSA G E +Y+ AI +RF+SYG
Sbjct: 301 YVDLVIKPGYKFKVVDGLLTNFHLPKSSLLLLVSAMIGRERLLDLYKKAIKEKFRFFSYG 360
Query: 352 DT 353
D
Sbjct: 361 DA 362
>gi|217033322|ref|ZP_03438753.1| hypothetical protein HP9810_9g75 [Helicobacter pylori 98-10]
gi|216944263|gb|EEC23688.1| hypothetical protein HP9810_9g75 [Helicobacter pylori 98-10]
Length = 345
Score = 186 bits (471), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 124/359 (34%), Positives = 194/359 (54%), Gaps = 25/359 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D+DLP IA P+ P++ A+L+V I+ + F N IV N
Sbjct: 6 LESYDYDLPKELIANYPILPKEKAKLLVYERRSQK---ITHTTFKHVLDFFPKNALIVLN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKVI A+L G + + + E+ H N+ + IK GD + F
Sbjct: 63 DTKVIKARLFGSKHAFLPSKTTEV--FFHRFFKDNTALTQIKGK--IKVGDKIFF----- 113
Query: 123 QSRLEATVIDKWNTGEILLVF-----SISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+ A V++ + G+ L+ F ++ + + + G +PLPPYI KR ++ D
Sbjct: 114 DAHYYAEVLELLHNGQRLIAFYNNKTPLNQANILKLLEQYGHMPLPPYI--KRADESLDA 171
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
+YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+ +D +
Sbjct: 172 HEYQSVFAKHMGAVAAPTASLHFSQNTLEKLLK-DFKHAFLTLHVGAGTFLGVETKDIRE 230
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H +H+E+ I + + L + ++ +GTT+LR +E + N + +IF+
Sbjct: 231 HQIHTEVLRIPKKSQEIL----QKSQEVLCIGTTALRSVEYFKRLENP-NQEAFECDIFL 285
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
V+ L++NFHLPKS+LLMLVSA G+E+TK++YQ AI YRFYSYGD L+
Sbjct: 286 HLANPILHVNHLLTNFHLPKSSLLMLVSAMVGLEKTKEIYQIAIEKKYRFYSYGDGMLI 344
>gi|228470155|ref|ZP_04055064.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas uenonis 60-3]
gi|228308293|gb|EEK17148.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas uenonis 60-3]
Length = 425
Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 138/433 (31%), Positives = 206/433 (47%), Gaps = 98/433 (22%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+ LP RIA P+ RD RL++ + DH ++LP L + ++ N
Sbjct: 15 INDYDYPLPDERIAAHPLAERDQCRLLLSDATGR----LEDHTFAELPKLLPPHALLIRN 70
Query: 63 NTKVITAQL-----NGVR---FCHINRR----EKEIS----CTLHMRV-SPNSWSVYARP 105
NT+VI A++ G R C + E+ +S C+ H V + W RP
Sbjct: 71 NTRVIKARIFFVKATGARIEILCLDPYKPVSYEESLSSLGSCSWHCLVGNSKKW----RP 126
Query: 106 SKVIK------KGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGT 159
+ I G + Q+ EA D + +S + L G
Sbjct: 127 EQTISCTLPLAGGQTITL-----QANREADTPDV-----VTFSWSDETKSFGEILELCGQ 176
Query: 160 IPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVT 219
+P+PPY+ R+ ++ D DYQT YA+I+GSVAAPTAGLHFT L +L++ G ++ +T
Sbjct: 177 LPIPPYLNRE--TESSDLTDYQTVYARIEGSVAAPTAGLHFTPELDDQLLAEGHRITELT 234
Query: 220 LHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET- 278
LHVGAGTF+PVK DH MHSE + PTA ++ V +GTTS+R LE+
Sbjct: 235 LHVGAGTFLPVKGRQVADHQMHSE--YCSVPTATLETLLEHIDSPFVPIGTTSVRTLESL 292
Query: 279 --------ATTEDGI-------INPWSGF------------------------------- 292
++G ++ W +
Sbjct: 293 YWFAVALQQAEQEGRDVAEPFHLDQWYSYRMHQSCGASLPSRREALEILLRYVRHKGLDR 352
Query: 293 ----TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHA-YRF 347
T + I PGY+++ VDIL++NFH PKSTLL+LVSA G + +Y+HA++ A YRF
Sbjct: 353 LTFSTALLIAPGYQYQMVDILVTNFHQPKSTLLLLVSALIG-PHWRTLYEHALADAHYRF 411
Query: 348 YSYGDTSLLFQKR 360
SYGD LL+++
Sbjct: 412 LSYGDACLLYRRE 424
>gi|15645676|ref|NP_207853.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori 26695]
gi|3914525|sp|O25702|QUEA_HELPY RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|2314205|gb|AAD08102.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queA)
[Helicobacter pylori 26695]
Length = 345
Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 126/359 (35%), Positives = 194/359 (54%), Gaps = 25/359 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D+ LP IA PV P++ A+L+V I+ + F N IV N
Sbjct: 6 LESYDYYLPKELIASYPVLPKEKAKLLVYERRSQK---ITHTTFEHVLDFFPKNALIVLN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKVI A+L G + + + E+ R N+ ++ K IK GD + F
Sbjct: 63 DTKVIKARLFGSKHAFLPSKTTEV---FFHRFFKNNTALTQIKGK-IKVGDKIFF----- 113
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQ-----ISLVGTIPLPPYIARKRPIDARDY 177
+ A V++ + G+ L+ F + L ++ + G +PLPPYI KR ++ D
Sbjct: 114 DANYHAEVLELLHNGQRLIAFYDNKTPLNQENILKLLEQYGHMPLPPYI--KRADESLDA 171
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
+YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+ +D +
Sbjct: 172 HEYQSVFAKHMGAVAAPTASLHFSQNTLEKLLK-DFKHAFLTLHVGAGTFLSVETKDIRE 230
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H +H+E+ I + + L + I+ VGTT+LR +E + N + +IF+
Sbjct: 231 HQIHTEVLRIPKKSQEIL----QKSQEILCVGTTALRSVEYFKRLENP-NQEAFECDIFL 285
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
V+ L++NFHLPKS+LLMLVS G+E+TK++Y+ AI YRFYSYGD L+
Sbjct: 286 HFANPILHVNYLLTNFHLPKSSLLMLVSTMIGLEKTKEIYKTAIEKKYRFYSYGDGMLI 344
>gi|288799662|ref|ZP_06405121.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
sp. oral taxon 299 str. F0039]
gi|288332910|gb|EFC71389.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
sp. oral taxon 299 str. F0039]
Length = 388
Score = 185 bits (470), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 122/392 (31%), Positives = 192/392 (48%), Gaps = 43/392 (10%)
Query: 1 MMVKEFDFDLPPSRIALRP-VFPR-----------------DSARLMVVHPNL-SCPLVI 41
M + +F F LP ++AL P F R D +RLMV+H + L
Sbjct: 1 MKLSQFKFKLPAEQVALYPHCFEREYTDKDGKKETFKITRQDESRLMVLHKKSGTIDLFQ 60
Query: 42 SDH----------LVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLH 91
D ++ + + D +FN+TKV A+L G + + + +I L
Sbjct: 61 KDENGNPIEGKYIEFRNIVEYFDEGDTFIFNDTKVFPARLYGTK----EKTDAKIEVFLL 116
Query: 92 MRVSPNS--WSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNT-GEIL-LVFSISG 147
++ W V P++ I+ G+ L FF + G + A VID + G L ++
Sbjct: 117 RELNQEMRLWDVLVEPARKIRIGNKL-FFDESGS--MVAEVIDNTTSRGRTLRFLYDCPH 173
Query: 148 IELERQISLVGTIPLPPYIARKRP---IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNL 204
E ++++ +G PLP YI R D ++Q +AK +G+V AP GLHF+ L
Sbjct: 174 EEFKKELYALGESPLPRYIIDNREETHATQEDLENFQCIFAKNEGAVTAPATGLHFSREL 233
Query: 205 LSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGR 264
L R+ GI ++TLH G G F ++VED H M SE ++A + +N K G +
Sbjct: 234 LKRMEIKGINNAYITLHCGLGCFNDIEVEDLTKHKMDSEQMVVNAEACKIVNDTKRNGKK 293
Query: 265 IVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLV 324
+ +VGT+ ++ ETA DG++ + G+TN FI P Y F + +++NF+ P STLLM
Sbjct: 294 VCAVGTSVVKATETAVGTDGMLKEFEGWTNKFIFPPYDFGLSNTMVTNFYHPYSTLLMET 353
Query: 325 SAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+AF G E + Y A+ H Y F +GD+ L+
Sbjct: 354 AAFGGYELVMEAYDLAVKHGYMFGCFGDSLLI 385
>gi|282858550|ref|ZP_06267721.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella bivia JCVIHMP010]
gi|282588675|gb|EFB93809.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella bivia JCVIHMP010]
Length = 394
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 121/401 (30%), Positives = 196/401 (48%), Gaps = 51/401 (12%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVHPNLSCPLVIS 42
M + +F F+LP ++AL P V RD RLMVVH S + +
Sbjct: 1 MKLSQFKFNLPEEQVALYPHSSERVLKRADGSEQKFTVVRRDEGRLMVVHRK-SGKIDMF 59
Query: 43 DHLVSDLPA------------FLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTL 90
++D P + D +FN+TKV A+L G + + + +I L
Sbjct: 60 KGDITDKPKEEDYIRFRDVLDYFGEGDTFIFNDTKVFPARLYGTK----EKTDAKIEVFL 115
Query: 91 --HMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNT-GEIL-LVFSIS 146
+ W V P++ I+ G+ L FF + G + A VID + G L ++
Sbjct: 116 LRELNAEMRLWDVLVEPARKIRIGNKL-FFDESGT--MVAEVIDNTTSRGRTLRFLYDCD 172
Query: 147 GIELERQISLVGTIPLPPYIARKRPID---------ARDYVDYQTTYAKIQGSVAAPTAG 197
E +R++ +G PLP YI RP + A D ++Q+ +AK +G+V+AP
Sbjct: 173 HEEFKRELFALGEAPLPRYIIDNRPKEEGEEFAHATADDLENFQSVFAKNEGAVSAPGTN 232
Query: 198 LHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNS 257
+HF+ +++ + G+K FVTLH G G+F ++VED H M SE I+A + +N
Sbjct: 233 IHFSEHMMKMMEIKGLKSAFVTLHCGLGSFHDIEVEDLTKHKMDSEEMHINAEACEIVNK 292
Query: 258 VKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPK 317
K G ++ +VG + ++ E++ DG++ + G+TN FI P Y F D ++ NF+ P
Sbjct: 293 TKLGGHKLCAVGASVVKACESSVGTDGLLKEYDGWTNKFIFPPYNFGLADSMLVNFYHPY 352
Query: 318 STLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
S LLM +AF G + + Y A+ + Y F S+GD+ L+
Sbjct: 353 SVLLMETAAFGGYDLIMEAYDLAVKNGYMFGSFGDSMLILN 393
>gi|260909536|ref|ZP_05916239.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
sp. oral taxon 472 str. F0295]
gi|260636384|gb|EEX54371.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
sp. oral taxon 472 str. F0295]
Length = 388
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 127/399 (31%), Positives = 190/399 (47%), Gaps = 53/399 (13%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVHPNLSCPLVIS 42
M + +F+F LP IAL P + RD RLMV+H + +
Sbjct: 1 MKLSQFNFKLPQELIALYPHSVYHEIENEKGEKEMSRLTRRDECRLMVLHKKSNTIDLFK 60
Query: 43 DHLVS-----------DLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLH 91
D+ + + D +FN+TKV A+L G++ + + +I L
Sbjct: 61 KDKKGKPIKGEFIQFRDIIDYFDEGDTFIFNDTKVFPARLYGMK----EKTDAKIEVFLL 116
Query: 92 MRVSPNS--WSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNT-GEIL-LVFSISG 147
++ W V P++ I+ G+ L F D + A VID + G L ++
Sbjct: 117 RELNQEMRLWDVLVEPARKIRIGNKLFF---DDSGTMVAEVIDNTTSRGRTLRFLYDCDH 173
Query: 148 IELERQISLVGTIPLPPYIARKRPIDAR--------DYVDYQTTYAKIQGSVAAPTAGLH 199
E +R + +G PLP YI IDAR D D+QT YA +G+V AP GLH
Sbjct: 174 DEFKRSLFALGESPLPRYI-----IDARENHHGTEEDMEDFQTIYAANEGAVTAPATGLH 228
Query: 200 FTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVK 259
F+ LL R+ GI +TLH G G F ++VED H + SE I + +N K
Sbjct: 229 FSRELLKRMEIRGINSAAITLHCGLGNFHDIEVEDLTKHKVDSESMHIGSEACAIVNKAK 288
Query: 260 SRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKST 319
S G I +VGT+ ++ ETA DG++ +SG+TN FI P Y F D +++NF+ P ST
Sbjct: 289 SEGKHICAVGTSVVKATETAVGTDGMLKEYSGWTNRFIFPPYDFGLADTMVANFYHPLST 348
Query: 320 LLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
LLM +AF G + + Y+ A+ + Y+F +GD L+
Sbjct: 349 LLMSTAAFGGYDLVMEAYRLAVENEYKFGCFGDALLILN 387
>gi|282880083|ref|ZP_06288803.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella timonensis CRIS 5C-B1]
gi|281305956|gb|EFA97996.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella timonensis CRIS 5C-B1]
Length = 388
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 122/393 (31%), Positives = 189/393 (48%), Gaps = 43/393 (10%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVHPNLSCPLVIS 42
M + +F F+LP IAL P + RD +RLMV+H +
Sbjct: 1 MKLSQFKFNLPEELIALYPHSVYHEIKNAHGKKEISRMTRRDESRLMVLHRKSQTIDMFQ 60
Query: 43 DHLVSDLPA-----------FLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLH 91
+ + D +FN+TKV A+L G + + + +I L
Sbjct: 61 KDKKGKDIKGQYLEFRHVLDYFDEGDTFIFNDTKVFPARLYGTK----EKTDAKIEVFLL 116
Query: 92 MRVSPNS--WSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNT-GEIL-LVFSISG 147
++ W V P++ I+ G+ L FF + G + A VID + G L ++
Sbjct: 117 RELNQEMRLWDVLVEPARKIRIGNKL-FFDESGT--MVAEVIDNTTSRGRTLRFLYDCPH 173
Query: 148 IELERQISLVGTIPLPPYIARKRPI---DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNL 204
E + ++ +G PLP YI +R + DA D DYQT +AK +G+V AP+ GLHF+ +
Sbjct: 174 DEFKHELFALGETPLPRYIINRREVPHADAHDQEDYQTIFAKHEGAVRAPSTGLHFSREM 233
Query: 205 LSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGR 264
L R+ GI ++TLH F ++VED H M SE IDA + +N K G
Sbjct: 234 LKRMEIKGIHDTYITLHCSLSAFNSIEVEDLTKHKMDSEQMKIDAKVCEIVNRTKQEGHH 293
Query: 265 IVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLV 324
+ +VGT+ ++ ETA DG++ + G+T+ FI P Y F D +++NF+ S LLM
Sbjct: 294 VCAVGTSVVKATETAVGTDGLLKEYDGWTSKFIFPPYDFGLADTMIANFYHSMSPLLMET 353
Query: 325 SAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+AF G E + Y A+ + Y+F YGD+ L+
Sbjct: 354 AAFGGYELVMEAYDLAVKNGYKFGCYGDSMLIL 386
>gi|261839233|gb|ACX98998.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori 52]
Length = 345
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 124/359 (34%), Positives = 196/359 (54%), Gaps = 25/359 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D+DLP IA P+ P++ A+L+V I+ + F N +V N
Sbjct: 6 LESYDYDLPKELIANYPILPKEKAKLLVYERRSQK---ITHTTFEHVLDFFPKNALVVLN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKVI A+L G + + + E+ R N+ ++ K IK GD + F
Sbjct: 63 DTKVIKARLFGSKHAFLPSKTTEV---FFHRFFENNRALTQIKGK-IKVGDKIFF----- 113
Query: 123 QSRLEATVIDKWNTGEILLVF-----SISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+ A V++ + G+ L+ F ++ + + + G +PLPPYI KR ++ D
Sbjct: 114 DTHYYAEVLELLHNGQRLIAFYDNKTPLNQANILKLLEQHGHMPLPPYI--KRADESLDT 171
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
+YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+ +D +
Sbjct: 172 HEYQSVFAKHMGAVAAPTASLHFSQNTLEKLLK-DFKHAFLTLHVGAGTFLGVETKDIRE 230
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H +H+E+ I + + L + I+ +GTT+LR +E + N + +IF+
Sbjct: 231 HQIHTEMLRIPKKSQEIL----QKSQEILCIGTTALRSVEYFKRLENP-NQEAFECDIFL 285
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
V+ L++NFHLPKS+LLMLVSA G+E+TK++Y+ AI YRFYSYGD L+
Sbjct: 286 HLANPILHVNYLLTNFHLPKSSLLMLVSAMVGLEKTKEIYKIAIEKKYRFYSYGDGMLI 344
>gi|302335516|ref|YP_003800723.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Olsenella
uli DSM 7084]
gi|301319356|gb|ADK67843.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Olsenella
uli DSM 7084]
Length = 387
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 123/399 (30%), Positives = 191/399 (47%), Gaps = 56/399 (14%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LP S IA P PRD+ RL+V+ + +DL +L D +V
Sbjct: 1 MRTDDFDYPLPDSLIAQVPCEPRDACRLLVLDRKDGS---VEHRRFTDLVDYLEPGDLLV 57
Query: 61 FNNTKVITAQL-------NGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGD 113
N T+V+ A+L GV + R +++ H+ W +P K +K+G
Sbjct: 58 ANRTRVLPARLMGHKRGTGGVSETLLLARREDVDALGHV------WECLVKPGKRLKQGA 111
Query: 114 ILHFFSQDGQSRLEATVI---------DKWNTGEILLVFSISGIELERQISLVGTIPLPP 164
++ + + ++ V+ D+ G ++ + G+ L+ I G +PLPP
Sbjct: 112 VVEYREGGIHAPMDWPVVLTGEVIDYVDESRGGRLVRFEPVGGLSLDEAIHRAGHVPLPP 171
Query: 165 YIARKRPIDARDYVDYQTTYA-KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVG 223
YI R YQT Y+ + + S AAPTAGLHFT L+ R+ I V L VG
Sbjct: 172 YITDYEGDPER----YQTVYSMREEHSAAAPTAGLHFTPELIKRIRGRDIDFRTVELEVG 227
Query: 224 AGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED 283
TF V+ +D H MH+E + A+++ K+ G R+++VGTTS+R LE+A D
Sbjct: 228 IDTFRLVEEDDPTQHAMHTERYHVGRGVVDAVHATKAAGHRVIAVGTTSVRSLESAFDPD 287
Query: 284 --------------------------GIINPWSGFTNIFITPGYRFRAVDILMSNFHLPK 317
I+ T++++ PG F VD +++NFH+P+
Sbjct: 288 VPAWGTPVCARRFEGARDSARLLGRGDIVERVDATTDLYLMPGSTFHVVDAMITNFHVPR 347
Query: 318 STLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
STL+MLVSAF E+ YQ A++ YRF S+GD L+
Sbjct: 348 STLMMLVSAFATREQIMGAYQAAMNEGYRFLSFGDAMLI 386
>gi|317179221|dbj|BAJ57009.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori F30]
Length = 345
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 125/359 (34%), Positives = 193/359 (53%), Gaps = 25/359 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D+DLP IA P+ P++ A+L+V I+ + F N +V N
Sbjct: 6 LESYDYDLPKELIANYPILPKEKAKLLVYERRSQ---KITHTTFEHVLDFFPKNALVVLN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKVI A+L G + + + E+ H N+ + IK D + F
Sbjct: 63 DTKVIKARLFGSKHAFLPSKTTEV--FFHRFFKDNTALTQIKGK--IKVEDKIFF----- 113
Query: 123 QSRLEATVIDKWNTGEILLVF-----SISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+ A V++ + G+ L+ F ++ + + + G +PLPPYI KR ++ D
Sbjct: 114 DAHYYAEVLELLHNGQRLIAFYNNKTPLNQANILKLLEQYGHMPLPPYI--KRADESLDT 171
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
+YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+ +D D
Sbjct: 172 HEYQSVFAKHMGAVAAPTASLHFSQNTLEKLLK-DFKHAFLTLHVGAGTFLGVETKDIRD 230
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H +H+E+ I + + L + I+ VGTT+LR +E + N + +IF+
Sbjct: 231 HQIHTEVLCIPKKSQEIL----QKSQEILCVGTTALRSVEYFKRLENP-NQETFECDIFL 285
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
V+ L++NFHLPKS+LLMLVSA G+E+TK++YQ AI YRFYSYGD L+
Sbjct: 286 HLANPILHVNHLLTNFHLPKSSLLMLVSAMIGLEKTKEIYQIAIEKKYRFYSYGDGMLI 344
>gi|160886607|ref|ZP_02067610.1| hypothetical protein BACOVA_04618 [Bacteroides ovatus ATCC 8483]
gi|156107018|gb|EDO08763.1| hypothetical protein BACOVA_04618 [Bacteroides ovatus ATCC 8483]
Length = 406
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 131/415 (31%), Positives = 204/415 (49%), Gaps = 81/415 (19%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ E+ + LP RIA P+ RD ++L++ +S+ + + LP +L ++FN
Sbjct: 10 ISEYSYPLPDERIAKFPLPTRDQSKLLIYRRG-----EVSEDVFTSLPEYLPQGSLMIFN 64
Query: 63 NTKVITAQLNGVR--------FCH---------INRREKEISCTLHMRVSPNSWSVYARP 105
NTKVI A+L+ + FC +N ++ + L M + W
Sbjct: 65 NTKVIQARLHFRKETGALIEVFCLEPIQPNDYVLNFQQTAHAAWLCMIGNLKKWKDRQLK 124
Query: 106 SKVIKKGDILHFFSQDGQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPP 164
++ KG + + G+ + + +D W+ E+ + + I + + G +P+PP
Sbjct: 125 REMTVKGFPITLTATRGECKGTSHWVDFAWDNPEV----TFADI-----LEVFGELPIPP 175
Query: 165 YIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
Y+ R + D YQT Y+KI+GSVAAPTAGLHFTS +L L GI + +TLHVGA
Sbjct: 176 YLNRD--TEESDKETYQTVYSKIKGSVAAPTAGLHFTSRVLDALQEKGIDLEELTLHVGA 233
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET------ 278
GTF PVK E+ + H MH+E ++ T + L G ++VGTTS+R LE+
Sbjct: 234 GTFKPVKSEEIEGHEMHTEYISVNRSTIKKL---IDHDGCAIAVGTTSVRTLESLYHIGV 290
Query: 279 -------ATTEDGIINPWSGF------------------------------TNIFITPGY 301
AT E+ + W + T I I PGY
Sbjct: 291 TLAENPYATEEELRVKQWQPYEKYDQIPPVVALQKILGYLDRNGLETLHTSTQIIIAPGY 350
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
++ V +++NFH P+STLL+LVSAF + +Y +A++H +RF SYGD+SLL
Sbjct: 351 NYKIVKAMVTNFHQPQSTLLLLVSAFVK-GNWRTIYDYALAHDFRFLSYGDSSLL 404
>gi|303235950|ref|ZP_07322553.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella disiens FB035-09AN]
gi|302483823|gb|EFL46815.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella disiens FB035-09AN]
Length = 394
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 123/400 (30%), Positives = 191/400 (47%), Gaps = 49/400 (12%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVHPNLSCPLVIS 42
M + +F F+LP ++AL P V RD ARLMV+H + +
Sbjct: 1 MKLSQFKFNLPKEQVALYPHSSERVLNRADGTSQVFKVTRRDEARLMVLHKKSGTIDMYN 60
Query: 43 DHL-----------VSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLH 91
+ D+ + + D VFN+TKV A+L G + + + +I L
Sbjct: 61 KEVKGEPTEEDYIRFKDVVNYFDEGDTFVFNDTKVFPARLYGTK----EKTDAKIEVFLL 116
Query: 92 MRVSPNS--WSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNT-GEIL-LVFSISG 147
++ W V P++ I+ G+ L FF + G + A VID + G L ++
Sbjct: 117 RELNQEMRLWDVLVEPARKIRIGNKL-FFDESGS--MVAEVIDNTTSRGRTLRFLYDCPH 173
Query: 148 IELERQISLVGTIPLPPYIARKRP---------IDARDYVDYQTTYAKIQGSVAAPTAGL 198
E ++++ +G PLP YI R DA D ++QT +AK +G+V AP L
Sbjct: 174 EEFKKELYALGEAPLPRYIIDNREKEAGEDFAHADAADLENFQTVFAKHEGAVTAPGTNL 233
Query: 199 HFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSV 258
HF+ +L+ L GI F+TLH G G F ++VED H M SE I+A Q +N
Sbjct: 234 HFSEHLMKMLEIKGIHSAFITLHCGLGNFHNIEVEDLTKHKMDSEEMHINAEACQIVNDT 293
Query: 259 KSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKS 318
K R+ ++G + ++ ETA DG++ + G+TN FI P Y F + ++ NF+ P S
Sbjct: 294 KLANHRVCAIGASVVKATETAVGTDGMLKEYDGWTNKFIFPPYDFGLANSMLVNFYHPYS 353
Query: 319 TLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
TLLM +AF G + + Y A+ Y+F +GD L+
Sbjct: 354 TLLMETAAFGGYDLVMEAYDKAVKGGYQFGCFGDALLILN 393
>gi|297379606|gb|ADI34493.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori v225d]
Length = 345
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 123/359 (34%), Positives = 193/359 (53%), Gaps = 25/359 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D+DLP IA P+ P++ A+L+V I+ + F N +V N
Sbjct: 6 LESYDYDLPKKLIANYPILPKEKAKLLVYERRSQK---ITHTTFEHVLDFFPKNALVVLN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKVI A+L G + + + E+ H N+ + IK GD + F
Sbjct: 63 DTKVIKARLFGSKHAFLPSKTTEV--FFHRFFKDNTALTQIKGK--IKVGDKIFF----- 113
Query: 123 QSRLEATVIDKWNTGEILLVF-----SISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+ A V++ + G+ L+ F ++ + + + G +PLPPYI KR ++ D
Sbjct: 114 DAHYHAEVLELLHNGQRLIAFYGNKNPLNQANILKLLEQYGHMPLPPYI--KRADESLDT 171
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
+YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+ +D +
Sbjct: 172 HEYQSVFAKHMGAVAAPTASLHFSQNTLEKLLK-DFKHAFLTLHVGAGTFLGVETKDIRE 230
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H +H+E+ I + + L + I+ +GTT+LR +E + N + +IF+
Sbjct: 231 HQIHTEVLRIPKKSQEIL----QKSQEILCIGTTALRSVEYFKRLENP-NQEAFECDIFL 285
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
V+ L++NFHLPKS+LLMLVSA G+E+ K++YQ AI YRFYSYGD L+
Sbjct: 286 HLANPILHVNYLLTNFHLPKSSLLMLVSAMVGLEKIKEIYQIAIEKKYRFYSYGDGMLI 344
>gi|261879604|ref|ZP_06006031.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
bergensis DSM 17361]
gi|270333753|gb|EFA44539.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
bergensis DSM 17361]
Length = 397
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 121/400 (30%), Positives = 194/400 (48%), Gaps = 49/400 (12%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVH---------- 32
M + +F F LP +AL P V RD +RLMV+H
Sbjct: 1 MKLSQFKFKLPEELVALYPHSFMREFTNDDGTKGSIRVTRRDESRLMVLHRTTGEIEMYR 60
Query: 33 PNLSCPLVISDHL-VSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLH 91
+ + ++L +L + + +D + N+TKV A+L G + + E+
Sbjct: 61 KDAKGNPIEGEYLDFRNLLDYFDEHDTFILNDTKVFPARLYGTK--EKTDAKIEVFILRE 118
Query: 92 MRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNT-GEIL-LVFSISGIE 149
+ + W V P++ I+ G+ L FF + G + A V D + G L ++ S +
Sbjct: 119 LNRETHLWDVLVEPARKIRIGNKL-FFDEVGT--MVAEVYDNTTSRGRSLRFLYDCSHEQ 175
Query: 150 LERQISLVGTIPLPPYIARKRP---------IDAR----DYVDYQTTYAKIQGSVAAPTA 196
+ +G +PLP YI RP + +R D +Q YAK +G+V AP
Sbjct: 176 FREDLFALGEMPLPTYILNGRPEHPEMKGMHVRSRALPEDSEYFQCVYAKNEGAVTAPAT 235
Query: 197 GLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALN 256
GLHF+ L+ R+ GI F+TLH G G F P++VED H M SE I +N
Sbjct: 236 GLHFSRELMKRMEIKGIHTAFITLHCGLGNFTPIEVEDLTKHKMDSEQMIITKKACDIVN 295
Query: 257 SVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLP 316
+ G R+ ++GT+ L+ ETA DG++ ++G+T+ FI P Y F D +++NF+ P
Sbjct: 296 RTRKEGHRLCAIGTSVLKATETAVGTDGMLKEYNGWTSKFIFPKYDFGLADSMVANFYHP 355
Query: 317 KSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ST++M +AF G E+ + Y A+ H Y+F +GD+ L+
Sbjct: 356 ESTMVMATAAFGGYEKVMECYDLAVKHGYKFGCFGDSLLI 395
>gi|260592515|ref|ZP_05857973.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
veroralis F0319]
gi|260535561|gb|EEX18178.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
veroralis F0319]
Length = 423
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 133/424 (31%), Positives = 198/424 (46%), Gaps = 82/424 (19%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ ++++ LP RIA P+ RD ++L++ H + +S+ + +LP +L +VF
Sbjct: 10 ISDYNYPLPDERIAKFPLTERDHSKLLLYKHGD------VSEDIFYNLPEYLPKGALMVF 63
Query: 62 NNTKVITAQLNGVR----FCHINRREKEISCTLHMRVSPN---SWSVYARPSKVIKKGDI 114
NNTKVI A+++ + + E + N +W K K+G +
Sbjct: 64 NNTKVIQARMHFRKETGALIEVFLMEPAQPTDYELMFQTNHECAWLCMVGNLKKWKEGAL 123
Query: 115 LHFFSQDGQSRLEATVIDKWNTGE--------ILLVFSISGIELERQISLVGTIPLPPYI 166
F GQ +D+ E I + + I + VG +P+PPY+
Sbjct: 124 KRAFEIKGQKLTLTATMDRSKVQEQAGGTNHWIQFEWDNTNISFAEILEAVGELPIPPYL 183
Query: 167 ARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGT 226
R + D YQT Y+KI+GSVAAPTAGLHFT +L L G+ +TLHVGAGT
Sbjct: 184 --NRATEESDKETYQTVYSKIKGSVAAPTAGLHFTDKVLKALDEHGVDREELTLHVGAGT 241
Query: 227 FMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-------- 278
F PVK + + H MH+E + Q L + R ++VGTTS+R LE+
Sbjct: 242 FKPVKSHEIEGHNMHTEFIIV---RRQTLIKLLKHKCRAIAVGTTSVRTLESLYYMGVKL 298
Query: 279 -----ATTEDGIINPWSGF----------------------------------------- 292
AT +D +N W +
Sbjct: 299 VSNNNATEDDLHVNQWEPYDLPHNSDGLVKVNGKVISVEESIQNLLDYLDRDGLNALHSS 358
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T I I PGY ++ V L++NFH P+STLL+LVSAF + +K+Y +A+SH +RF SYGD
Sbjct: 359 TQIIIAPGYTYKIVKALITNFHQPQSTLLLLVSAFVK-GDWRKIYDYALSHDFRFLSYGD 417
Query: 353 TSLL 356
+SLL
Sbjct: 418 SSLL 421
>gi|317013828|gb|ADU81264.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori Gambia94/24]
Length = 345
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 126/359 (35%), Positives = 196/359 (54%), Gaps = 25/359 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D+ LP IA PV P++ A+L+V I+ + F N +V N
Sbjct: 6 LESYDYHLPKELIANYPVLPKEKAKLLVYERRSQK---ITHTTFEHVLDFFPKNALVVLN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKVI A+L G + + + E+ H N+ + + IK GD + FF ++
Sbjct: 63 DTKVIKARLFGSKHAFLPSKTTEV--FFHRFFKGNTALIQIKGK--IKAGDKI-FFDEN- 116
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQ-----ISLVGTIPLPPYIARKRPIDARDY 177
A V++ + G+ L+ F + L ++ + G +PLPPYI KR ++ D
Sbjct: 117 ---YYAEVLELLHNGQRLIAFYDNQTPLNQENILKLLEQYGHMPLPPYI--KRADESLDA 171
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
+YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+ +D +
Sbjct: 172 HEYQSVFAKHIGAVAAPTASLHFSQNTLEKLLK-DFKHAFLTLHVGAGTFLGVETKDIRE 230
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H +H+E+ I + + L + I+ +GTT+LR +E N S +IF+
Sbjct: 231 HQIHTEVLHIPKKSQEILQESQE----ILCIGTTALRSVEYFKRLKNP-NQESFECDIFL 285
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ V+ L++NFHLPKS+LLMLVSA G+E+TK++Y+ AI YRFYSYGD L+
Sbjct: 286 HLANPIQHVNHLLTNFHLPKSSLLMLVSAMIGLEKTKEIYKIAIEKKYRFYSYGDGMLI 344
>gi|218262646|ref|ZP_03477020.1| hypothetical protein PRABACTJOHN_02699 [Parabacteroides johnsonii
DSM 18315]
gi|218223259|gb|EEC95909.1| hypothetical protein PRABACTJOHN_02699 [Parabacteroides johnsonii
DSM 18315]
Length = 406
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 133/410 (32%), Positives = 200/410 (48%), Gaps = 68/410 (16%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+++FD+ LP RIA P+ RD ++L++ +S+ + + +L +VFN
Sbjct: 10 IEDFDYPLPDERIAKFPLSKRDESKLLLYKEG-----KVSESIFKHITDYLPDGSLMVFN 64
Query: 63 NTKVITAQL-----NGVR---FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
NT+VI A+L G + FC + E + + W+ K K+G +
Sbjct: 65 NTRVIQARLLFQKETGAKIEIFC-LEPVEPHDYALVFQQTECCRWTCLVGNLKKWKEG-V 122
Query: 115 LHFFSQDGQSRLEATVIDKWNTGE---ILLVFSISGIELERQISLVGTIPLPPYIARKRP 171
L Q G + G+ I + + G +P+PPY+ R+
Sbjct: 123 LKKEVQFGDETVILKAEKLQTCGDSHLIEFTWDHPTCTFADLLDAAGVLPIPPYLNRE-- 180
Query: 172 IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK 231
+ D YQT Y+KI+GSVAAPTAGLHFT +L+ + + GI +TLHVGAGTF PVK
Sbjct: 181 TEKSDLQTYQTVYSKIKGSVAAPTAGLHFTPEVLAAIDARGIGREELTLHVGAGTFKPVK 240
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET------------- 278
E + H MH+E FI + ++ +K+ G+I++VGTTS+R LE+
Sbjct: 241 SETIEGHEMHTE--FISVRRS-SIERIKNNLGKIIAVGTTSVRTLESLYYMGGTLASNPD 297
Query: 279 ATTEDGIINPWSGF-------------------------------TNIFITPGYRFRAVD 307
AT E+ I+ W + T I I PGY F+ V
Sbjct: 298 ATAEELIVKQWMPYDEMNNKLTAGEALQNILDYLDRHQADKLVTATRIIIAPGYEFKIVR 357
Query: 308 ILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+++NFH PKSTLL+L+SAF + K +Y +A+ H +RF SYGD+SLL
Sbjct: 358 GIVTNFHQPKSTLLLLISAFVK-GDWKNIYDYALGHEFRFLSYGDSSLLL 406
>gi|307721623|ref|YP_003892763.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Sulfurimonas autotrophica DSM 16294]
gi|306979716|gb|ADN09751.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Sulfurimonas autotrophica DSM 16294]
Length = 342
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 134/362 (37%), Positives = 192/362 (53%), Gaps = 30/362 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
++ +DF LP IA P PRD A+L+V I+ +L FL A++
Sbjct: 6 LLTSSYDFTLPDELIASYPASPRDHAKLLVYD---RATDTITHTFFYNLEEFLPKECALI 62
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI A+L G + +I ++ ++ +VY R KV +I FF
Sbjct: 63 FNDTKVIKARLFGQK-----PSGGKIELLINRALNACDVNVYIR-GKVKAGSEI--FFED 114
Query: 121 DGQSRLEATVID-----KWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
+ ++++ D + + LL F +L I +G IPLPPYI +R +
Sbjct: 115 NLKAKVTKLNDDGSREVNFYQNDTLLRFE----DLLPIIDKIGHIPLPPYI--QRADEDE 168
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D +YQ+ +A +G+VAAPTA LHFT R I K +VTLHVG+GTF PV+ +
Sbjct: 169 DANEYQSVFACQEGAVAAPTASLHFTPAQHER-ICKNHKHAYVTLHVGSGTFKPVEADII 227
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+H MHSE I +P AQA + IVSVGTTS R +E G N+
Sbjct: 228 TEHPMHSEYYDI-SPQAQA---ILDSNIPIVSVGTTSTRTIEFYARHK---EQTKGEANL 280
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
F+ P + V+ L++NFHLPKSTLLMLV++F G+++T+++Y AI YRFYSYGD L
Sbjct: 281 FLHPNNKPLRVNHLLTNFHLPKSTLLMLVASFVGLQKTQELYAEAIKEKYRFYSYGDAML 340
Query: 356 LF 357
+
Sbjct: 341 IL 342
>gi|260592691|ref|ZP_05858149.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
veroralis F0319]
gi|260535461|gb|EEX18078.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
veroralis F0319]
Length = 394
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/398 (30%), Positives = 196/398 (49%), Gaps = 49/398 (12%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVH---------- 32
M + +F F+LP ++AL P + RD +RLMVVH
Sbjct: 1 MKLSQFKFNLPKEQVALYPHSSKRVLTRSDGSTQTFTITRRDESRLMVVHRKSGKIDMFK 60
Query: 33 PNLSCPLVISDHL-VSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLH 91
++ D++ D+ + DA +FN+TKV A+L G + + + +I L
Sbjct: 61 GEVNGDPTEDDYIRFKDVFDYFEEGDAFIFNDTKVFPARLYGTK----EKTDAKIEVFLL 116
Query: 92 MRVSPNS--WSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNT-GEIL-LVFSISG 147
++ W V P++ I+ G+ L FF + G + A VID + G L ++
Sbjct: 117 RELNQEMRLWDVLVEPARKIRIGNKL-FFDESGT--MVAEVIDNTTSRGRTLRFLYDCPH 173
Query: 148 IELERQISLVGTIPLPPYIARKRPIDA---------RDYVDYQTTYAKIQGSVAAPTAGL 198
E +R++ +G PLP YI RP + D ++Q+ +A+ +G+V+AP +
Sbjct: 174 EEFKRELFALGEAPLPRYIIDNRPKEEGEEFAHATKEDMENFQSVFARNEGAVSAPGTNI 233
Query: 199 HFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSV 258
HF+ +++ + GIK F+TLH G G F ++VED H M SE I+A + N+
Sbjct: 234 HFSEHMMKMMEIRGIKKSFITLHCGLGNFHDIEVEDLTKHKMDSEEMHINAEACEIANNA 293
Query: 259 KSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKS 318
K G + +VG + ++ ETA DG++ + G+TN FI P Y F D ++ NF+ P S
Sbjct: 294 KKAGHHLCAVGASVVKATETAVGTDGMLKEYDGWTNEFIFPPYNFGFADSMLVNFYQPYS 353
Query: 319 TLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
TLLM +AF G + + Y A+ + Y F +GD+ L+
Sbjct: 354 TLLMETAAFGGYDLIMEAYDKAVKNGYMFGCFGDSLLI 391
>gi|307565541|ref|ZP_07628021.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella amnii CRIS 21A-A]
gi|307345700|gb|EFN91057.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella amnii CRIS 21A-A]
Length = 394
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/400 (30%), Positives = 197/400 (49%), Gaps = 49/400 (12%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVH---------- 32
M + +F F LP ++AL P V RD RLMVVH
Sbjct: 1 MKLSQFKFSLPEDQVALYPHSSERILKRADGSEQKFTVVRRDEGRLMVVHRKSGKIDMFK 60
Query: 33 PNLSCPLVISDHL-VSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLH 91
++ D++ D+ + + DA +FN+TKV A+L G + + + +I L
Sbjct: 61 GEVTGEPKEEDYIRFRDVLNYFDDGDAFIFNDTKVFPARLYGTK----EKTDAKIEVFLL 116
Query: 92 MRVSPNS--WSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNT-GEIL-LVFSISG 147
++ + W V P++ I+ G+ L FF + G + A VID + G L ++
Sbjct: 117 RELNADMRLWDVLVEPARKIRIGNKL-FFDESGT--MVAEVIDNTTSRGRTLRFLYDCDH 173
Query: 148 IELERQISLVGTIPLPPYIARKRPI-DARDYVD--------YQTTYAKIQGSVAAPTAGL 198
E +R++ +G PLP YI RP + D+ +Q+ +AK +G+V+AP +
Sbjct: 174 DEFKRELFSLGEAPLPRYIIDNRPKKEGEDFAHATEDDLEYFQSVFAKNEGAVSAPGTNI 233
Query: 199 HFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSV 258
HF+ +++ + GIK F+TLH G+F ++VED H M SE I+A +NS
Sbjct: 234 HFSEHMMKMMEIKGIKSAFITLHCALGSFHDIEVEDLTKHKMDSEEMHINAEACAVVNST 293
Query: 259 KSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKS 318
K G ++ +VG + ++ ETA DG++ + G+TN FI P Y+F D ++ NF+ P S
Sbjct: 294 KKDGHKVCAVGASVVKACETAVGTDGLLKEYDGWTNKFIFPPYKFGLADSMLVNFYHPYS 353
Query: 319 TLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
LLM +AF G + + Y A+ + Y F +GD+ L+
Sbjct: 354 VLLMETAAFGGYDLIMQAYDLAVKNGYMFGCFGDSMLILD 393
>gi|223039644|ref|ZP_03609930.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter rectus RM3267]
gi|222879027|gb|EEF14122.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter rectus RM3267]
Length = 342
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 126/356 (35%), Positives = 190/356 (53%), Gaps = 32/356 (8%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
+D++LP IA P P++ ARL+V IS DLP L D I+FN+TK
Sbjct: 13 YDYELPQGLIANFPTLPKEDARLLVYE---RAGEKISHLKFGDLPEILPPCD-IIFNDTK 68
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSR 125
V+ A++ G + + E L+ ++ +SVY + ++ G IL+F
Sbjct: 69 VVKARIFGKK-----QSGGETELLLNSPLADGKFSVYIKGK--VRAGSILNF-----SEN 116
Query: 126 LEATVIDKWNTGEILLVFSISG-----IELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A V + + G + FS +G L + +S +G +PLPPYI R D + Y
Sbjct: 117 LTAEVCELFKDGSRTVKFSQNGRLLDAAALYKILSHIGHVPLPPYIKRSDTKDDESW--Y 174
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
Q+ +AK +G+VAAPTA LHF+ +++ L ++ ++TLHVGAGTF V+ ED H M
Sbjct: 175 QSVFAKNEGAVAAPTASLHFSDEMIAGLAK-DREIAYLTLHVGAGTFKGVESEDITRHKM 233
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E I T +NS K ++ VGTT R +E E SG +F+
Sbjct: 234 HAEFYDIPQDTQNLINSDKP----LLGVGTTVTRCVE----EFARSGKASGECRLFLNLN 285
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
R + L++NFHLPKSTL+MLV++F G+ +T ++Y+ A+ Y+FYSYGD L+
Sbjct: 286 NRPIRQNYLLTNFHLPKSTLIMLVTSFVGLRQTMRIYKTAVEQKYKFYSYGDAMLV 341
>gi|317181727|dbj|BAJ59511.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori F57]
Length = 345
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 123/359 (34%), Positives = 195/359 (54%), Gaps = 25/359 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D+DLP IA P+ P++ A+L+V I+ + F N +V N
Sbjct: 6 LESYDYDLPKELIANYPILPKEKAKLLVYERRSQK---ITHTTFEHVLDFFPKNALVVLN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKVI A+L G + + + E+ R N+ ++ K IK GD + F
Sbjct: 63 DTKVIKARLFGSKHAFLPSKTTEV---FFHRFFKNNTALTQIKGK-IKVGDKIFF----- 113
Query: 123 QSRLEATVIDKWNTGEILLVF-----SISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+ A V++ + G+ L+ F ++ + + + G +PLPPYI KR ++ D
Sbjct: 114 DAHYYAEVLELLHNGQRLIAFYGNKTPLNQANILKLLEQYGHMPLPPYI--KRADESLDA 171
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
+YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+ +D +
Sbjct: 172 HEYQSVFAKHIGAVAAPTASLHFSQNTLEKLLK-DFKHAFLTLHVGAGTFLGVETKDIRE 230
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H +H+E+ I + + L + ++ +GTT+LR +E + N + +IF+
Sbjct: 231 HQIHTEVLRIPKKSQEIL----QKSQEVLCIGTTALRSVEYFKRLENP-NQEAFECDIFL 285
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
V+ L++NFHLPKS+LLMLVS G+E+TK++YQ AI YRFYSYGD L+
Sbjct: 286 HLANPILHVNHLLTNFHLPKSSLLMLVSTMVGLEKTKEIYQIAIEKKYRFYSYGDGMLI 344
>gi|317010661|gb|ADU84408.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori SouthAfrica7]
Length = 345
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 129/361 (35%), Positives = 192/361 (53%), Gaps = 29/361 (8%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D+ LP IA P+ P++ A+L+V + I+ + F N IV N
Sbjct: 6 LESYDYHLPKELIANYPILPKEKAKLLVYERHSQT---ITHTTFEHVLDFFPKNALIVLN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKV+ A+L G + + + E+ H NS A+ IK GD + F DG
Sbjct: 63 DTKVMKARLFGSKHAFLPSKTTEV--FFHRFFKDNS--ALAQIKGKIKVGDRIFF---DG 115
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQ-----ISLVGTIPLPPYIAR-KRPIDARD 176
A V++ + G+ L+ F L++ + G +PLPPYI R +DAR+
Sbjct: 116 SHY--AEVLELLHNGQRLIAFYDHKTPLDQASILKLLEQYGHMPLPPYIKRADESLDARE 173
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
Y Q+ +AK G+VAAPTA LHF+ N L L+ K F+TLHVGAGTF V+ +D
Sbjct: 174 Y---QSVFAKHIGAVAAPTASLHFSQNTLENLLK-DFKHTFLTLHVGAGTFASVETKDIR 229
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT-NI 295
+H +H+E+ I + + L + I+ +GTT+LR +E I F +I
Sbjct: 230 EHQIHTEVLHIPKKSQEILQ----KSQEILCIGTTALRSVEYFKRLK--IPKQEAFECDI 283
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
F+ + + L++NFHLPKS+LLMLVSA G+E+TK++YQ AI YRFYSYGD L
Sbjct: 284 FLHLANPIQHANYLLTNFHLPKSSLLMLVSAMIGLEKTKEIYQIAIEKKYRFYSYGDGML 343
Query: 356 L 356
+
Sbjct: 344 I 344
>gi|315606288|ref|ZP_07881304.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
buccae ATCC 33574]
gi|315251979|gb|EFU31952.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
buccae ATCC 33574]
Length = 393
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 125/397 (31%), Positives = 189/397 (47%), Gaps = 48/397 (12%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVHP--------- 33
M + +F F L +IAL P V R+ +RLMV+H
Sbjct: 1 MKLSQFKFKLSEEQIALYPHTAEHVITRKDGTQSTFHVTRREESRLMVLHKKSERIDMYK 60
Query: 34 --NLSCPLVISDH-----LVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEI 86
PL ++ D+ + D +FN+TKV A+L G + + + +I
Sbjct: 61 TDETGEPLKDAEGRPQYIQFRDIVDYFGDGDTFIFNDTKVFPARLYGTK----EKTDAKI 116
Query: 87 SCTLHMRVSPNS--WSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNT-GEIL-LV 142
L ++ W V P++ I+ G+ L F D S + A VID + G L +
Sbjct: 117 EVFLLRELNEEMRLWDVLVEPARKIRIGNKLFF---DDTSTMVAEVIDNTTSRGRTLRFL 173
Query: 143 FSISGIELERQISLVGTIPLPPYIARKRP---IDARDYVDYQTTYAKIQGSVAAPTAGLH 199
+ E ++ + +G PLP YI +R D D+QT +AK +G+V AP GLH
Sbjct: 174 YDSPHDEFKQNLYALGESPLPRYIIDRRESHHATPEDMDDFQTVFAKNEGAVTAPATGLH 233
Query: 200 FTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVK 259
F+ LL R+ GI ++TLH G G F ++VED H M SE I A + +N K
Sbjct: 234 FSRELLKRMEIYGINFAYITLHCGLGNFHDIEVEDLTKHKMDSEQMKISAEACKVVNEAK 293
Query: 260 SRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKST 319
G I +VGT+ ++ ETA DG++ + G+TN FI P Y F D +++NF+ P ST
Sbjct: 294 RAGNHICAVGTSVVKATETAVGTDGMLKEFDGWTNKFIFPPYDFGLADCMVANFYHPLST 353
Query: 320 LLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
LLM +AF G + + Y A + Y+F +GD+ L+
Sbjct: 354 LLMSTAAFGGYDMVMECYNRAAADGYKFGCFGDSLLI 390
>gi|210635246|ref|ZP_03298458.1| hypothetical protein COLSTE_02389 [Collinsella stercoris DSM 13279]
gi|210158464|gb|EEA89435.1| hypothetical protein COLSTE_02389 [Collinsella stercoris DSM 13279]
Length = 413
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 133/417 (31%), Positives = 201/417 (48%), Gaps = 71/417 (17%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVH------PNLSCPLVISDHLVS------- 47
M +FD++LP IA P PRDS RL+V++ P + V H S
Sbjct: 6 MRTDDFDYNLPDELIAQAPAEPRDSCRLLVLNRELEGGPARAVDAVALAHGGSVEHRHFY 65
Query: 48 DLPAFLNSNDAIVFNNTKVITAQL------NGVRFCHINRREKEISCTLHMRVSPNSWSV 101
D+ +L D +V N T+V+ A+L GV + RR ++I H+ W
Sbjct: 66 DIIDYLEPGDLLVANQTRVMPARLIGKKPTGGVAETLLLRRREDIDALGHV------WEC 119
Query: 102 YARPSKVIKKGDILHF-----FSQDGQSR-LEATVID--KWNTGEILLVFSISGIE---- 149
P K +K G+++ + + +G L A ++D + G L+ F G
Sbjct: 120 LVNPGKRLKPGNVVEYRAGGLLAPEGSPVVLRAEIVDFVDDSKGGRLVRFEPVGANEQGE 179
Query: 150 ---LERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYA-KIQGSVAAPTAGLHFTSNLL 205
L+ I G +PLPPYI D YQT YA + S AAPTAGLHFT L+
Sbjct: 180 PRTLDEAIHAAGHVPLPPYITGYE----GDPEKYQTVYAMSEEHSAAAPTAGLHFTPELI 235
Query: 206 SRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRI 265
R+ + G V L VG TF V+ +D +H+MH+E + A +A+++ K+ G R+
Sbjct: 236 ERIKAKGCGWATVELEVGIDTFRLVEEDDPTEHVMHTERYHVPAEVVEAVHAAKAAGRRV 295
Query: 266 VSVGTTSLRLLETA------------------TTEDG--------IINPWSGFTNIFITP 299
++VGTT++R LE+A EDG I+ TN+++ P
Sbjct: 296 IAVGTTAVRSLESAWDANAAASVPPVTARGFEGREDGADMCGAGDIVTREDATTNLYLMP 355
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
G + VD L++NFH+P+STL+MLVSA ++ Y+ A+ YRF+S+GD L+
Sbjct: 356 GSTYHVVDALITNFHVPRSTLMMLVSALATRDQVIDAYEEAVRERYRFFSFGDAMLI 412
>gi|87125598|ref|ZP_01081443.1| Queuosine biosynthesis protein [Synechococcus sp. RS9917]
gi|86166898|gb|EAQ68160.1| Queuosine biosynthesis protein [Synechococcus sp. RS9917]
Length = 373
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 140/361 (38%), Positives = 193/361 (53%), Gaps = 22/361 (6%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAIV 60
++ +D+ LP RIA PV PR +ARL++V P + P+ + H V D L D +V
Sbjct: 8 LLSSYDYQLPEERIAQAPVEPRHAARLLMV-PPVDAPVEEARHRQVWDWQNALQPKDLLV 66
Query: 61 FNNTKVITAQL----NGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
N+T+V+ A+L +G + L R W A+P K + GD +
Sbjct: 67 VNDTRVLRARLRVRRSGGGMAEL--------LVLEPR-GEGQWLCLAKPGKKLNPGDQVW 117
Query: 117 FFSQDGQS-RLEATVIDKWNTGEILLV--FSISGIELERQISLVGTIPLPPYIARKRPID 173
+Q + L+ D + G I+ I +E + G +PLPPYI R D
Sbjct: 118 LEAQVQEPLPLQVLASDAASGGRIVQFPPGCEDAIAIEALLERYGEVPLPPYIDRH---D 174
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
A D YQT YA G+VAAPTAGLH + LL L GI + VTLHVG GTF PV+ E
Sbjct: 175 ASDQERYQTRYAARPGAVAAPTAGLHLSDELLEALRGRGIALATVTLHVGLGTFRPVETE 234
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-INPWSGF 292
D + +HSE + +A+ + ++RGGR+++VGTTS+R LE A G + P
Sbjct: 235 DLSELSLHSEWVEVSPALVEAVAACRARGGRVIAVGTTSVRALEGAAAAGGGSLIPIRQP 294
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
++ I PGYRF V L++NFHLPKS+LL+LVSA G E ++Y AI YRFYSYGD
Sbjct: 295 VDLVIQPGYRFAVVQGLLTNFHLPKSSLLLLVSALIGRERLLQLYDAAIEQRYRFYSYGD 354
Query: 353 T 353
Sbjct: 355 A 355
>gi|237752961|ref|ZP_04583441.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter winghamensis ATCC BAA-430]
gi|229375228|gb|EEO25319.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter winghamensis ATCC BAA-430]
Length = 361
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 124/375 (33%), Positives = 195/375 (52%), Gaps = 37/375 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +++ LP IA P+ P+++A+L+V + C +I+ + FL + +V
Sbjct: 4 LSLSSYNYTLPKECIATEPITPKEAAKLLVFNRK-DC--IITHSTFRNFANFLPKDTLLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREK-----EISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
FNNTKV+ A++ G + + + +I H +S N + + + +K G I+
Sbjct: 61 FNNTKVLPARIYGKKILQNLKNDSNLCGAKIEALFHKEISENRYLMQFKGR--LKAGSII 118
Query: 116 HFFSQDGQSRLEATVID---KWNTGEILLVFSISGIELERQ-----ISLVGTIPLPPYIA 167
F S +R+ + + + E ++ I L R + G IPLPPYI
Sbjct: 119 SFGSV--YARILGNLANIGIGFKEAEFFILKENKEIPLSRDAFFAFLEHSGHIPLPPYI- 175
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYF----VTLHVG 223
KR D DYQ+ +AK G++AAPTA LHF+ L K +F +TLH G
Sbjct: 176 -KRDDTQADKQDYQSVFAKHLGAIAAPTASLHFSKEAYKYL-----KEHFSTTEITLHTG 229
Query: 224 AGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED 283
AGTF+ V E+ +H MH+E FI +A+ + I ++GTT+ R +ET +
Sbjct: 230 AGTFLGVNTENILEHKMHTESFFIPQDSAKKMKV----ASHITAIGTTAARTIETYARSE 285
Query: 284 GIIN--PWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAI 341
SG ++F+ P +A L++NFHLPK+TLLMLV++F G+E+T K+YQ AI
Sbjct: 286 AFKEGKALSGECDLFLHPQNPPKATSALLTNFHLPKTTLLMLVASFIGLEQTLKLYQEAI 345
Query: 342 SHAYRFYSYGDTSLL 356
+ YRFYSYGD L+
Sbjct: 346 AKNYRFYSYGDGMLI 360
>gi|293372292|ref|ZP_06618677.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides ovatus SD CMC 3f]
gi|292632734|gb|EFF51327.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides ovatus SD CMC 3f]
Length = 406
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 130/415 (31%), Positives = 203/415 (48%), Gaps = 81/415 (19%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ E+ + LP RIA P+ RD ++L++ +S+ + + LP +L ++FN
Sbjct: 10 ISEYSYPLPDERIAKFPLPTRDQSKLLIYRRG-----EVSEDVFTSLPEYLPQGSLMIFN 64
Query: 63 NTKVITAQLNGVR--------FCH---------INRREKEISCTLHMRVSPNSWSVYARP 105
NTKVI A+L+ + FC +N ++ + L M + W
Sbjct: 65 NTKVIQARLHFRKETGALIEVFCLEPIQPNDYVLNFQQTAHAAWLCMIGNLKKWKDRQLK 124
Query: 106 SKVIKKGDILHFFSQDGQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPP 164
++ KG + + G+ + + +D W+ E+ + + I + + G +P+PP
Sbjct: 125 REMTVKGFPITLTATRGECKGTSHWVDFAWDNPEV----TFADI-----LEVFGELPIPP 175
Query: 165 YIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
Y+ R + D YQT Y+KI+GSVAAPTAGLHFT +L L GI + +TLHVGA
Sbjct: 176 YLNRD--TEESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALQEKGINLEELTLHVGA 233
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET------ 278
GTF PVK E+ + H MH+E ++ T + L G ++VGTTS+R LE+
Sbjct: 234 GTFKPVKSEEIEGHEMHTEYISVNRSTIKKL---IDHDGCAIAVGTTSVRTLESLYHIGV 290
Query: 279 -------ATTEDGIINPWSGF------------------------------TNIFITPGY 301
AT E+ + W + T I I PGY
Sbjct: 291 TLAENPYATEEELRVKQWQPYEKYDQIPPVVALQKILGYLDRNGLETLHTSTQIIIAPGY 350
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
++ V +++NFH P+STLL+LVSAF + +Y +A++H +RF SYGD+SLL
Sbjct: 351 NYKIVKAMVTNFHQPQSTLLLLVSAFVK-GNWRTIYDYALAHDFRFLSYGDSSLL 404
>gi|229495188|ref|ZP_04388923.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas endodontalis ATCC 35406]
gi|229317631|gb|EEN83529.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas endodontalis ATCC 35406]
Length = 445
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 140/429 (32%), Positives = 203/429 (47%), Gaps = 107/429 (24%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D+ LP RIA P+ R + RL+V +IS + F+ + ++ N
Sbjct: 49 IESYDYPLPDERIARYPLEDRAACRLLVYRSGE----IISSQF-RQITDFIPEHSLLIRN 103
Query: 63 NTKVITAQLNGVRFCHINR---REKEISC------TLHMRV----SPNSWSVYARPSKVI 109
NT+VI A++ H+ + + EI C + R S SW ++
Sbjct: 104 NTRVIRARI------HVQKPSGAQIEIMCLEPASPAQYERALSATSGCSWHCLVGNARRW 157
Query: 110 KKGDILHFFSQDGQS--------RLEATVID-KWNT-----GEILLVFSISGIELERQIS 155
K+G + + G++ R E VI WN+ GE+L S
Sbjct: 158 KEGALETLVTLPGETDPILFRIERGEGDVIHFSWNSDHCTFGELL--------------S 203
Query: 156 LVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKV 215
+VG +P+PPY+ +R + D ++YQT YA+ GSVAAPTAGLHFT L L G+ +
Sbjct: 204 VVGILPIPPYL--RRETEESDNINYQTVYAQCDGSVAAPTAGLHFTPELFEALKEKGVSL 261
Query: 216 YFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGR---IVSVGTTS 272
+TLHVGAGTFMPVK DH MH E+ ++ L GG I++VGTTS
Sbjct: 262 GEITLHVGAGTFMPVKTSKIGDHRMHQEVCRVERGIVAQLA-----GGSYSPIIAVGTTS 316
Query: 273 LRLLET-----------ATTEDGI--INPWSGF--------------------------- 292
+R LE+ ED + + W +
Sbjct: 317 VRTLESLYLLALNHIDELGQEDHLPFVTQWEPYETDYPEASMPQVMAALLSKMDSLSLEE 376
Query: 293 ----TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
T + I PGY FR V +++NFH PKSTLL+++SAF G EE +++Y +A+SH YRF
Sbjct: 377 VVFSTALLIAPGYTFRVVGGMVTNFHQPKSTLLLMISAFLG-EEWERIYDYALSHDYRFL 435
Query: 349 SYGDTSLLF 357
SYGD SLL
Sbjct: 436 SYGDGSLLL 444
>gi|317009031|gb|ADU79611.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori India7]
Length = 345
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 125/361 (34%), Positives = 196/361 (54%), Gaps = 29/361 (8%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D+ LP IA P+ P++ A+L+V I+ + F N +V N
Sbjct: 6 LESYDYHLPKELIANYPILPKEKAKLLVYERRSQK---ITHTTFEHVLDFFPKNALVVLN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKV+ A+L G + + + E+ R N+ ++ K IK GD + F
Sbjct: 63 DTKVMKAKLFGSKHAFLPSKTTEV---FFHRFFKNNTALTQIKGK-IKVGDKIFF----- 113
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQ-----ISLVGTIPLPPYIARKRPIDARDY 177
+ A V++ + G+ L+ F + L ++ + G +PLPPYI KR ++ D
Sbjct: 114 DANYYAEVLELLHNGQRLIAFYDNQTPLNQENILKLLEQYGHMPLPPYI--KRADESLDA 171
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
+YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+ +D +
Sbjct: 172 HEYQSVFAKHTGAVAAPTASLHFSQNTLEKLLK-DFKHAFLTLHVGAGTFLSVETKDIRE 230
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINP-WSGFT-NI 295
H +H+E+ I + + L I+ +GTT+LR +E + NP F +I
Sbjct: 231 HQIHTEVLRIPKKSQKIL----QESQEILCIGTTALRSVEYFKR---LKNPNQEAFECDI 283
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
F+ + V+ L++NFHLPKS+LLMLVSA G+E+TK++Y+ AI YRFYSYGD L
Sbjct: 284 FLHLANPIQHVNHLLTNFHLPKSSLLMLVSAMIGLEKTKEIYKIAIEKKYRFYSYGDGML 343
Query: 356 L 356
+
Sbjct: 344 I 344
>gi|226321149|ref|ZP_03796690.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi 29805]
gi|226233441|gb|EEH32181.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi 29805]
Length = 343
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 128/365 (35%), Positives = 194/365 (53%), Gaps = 35/365 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF F+LP S I P R S+RL+V+ P L + + V+++ ++NSN +
Sbjct: 1 MKTKEFHFNLPHSLIEQYPSEKRGSSRLIVLDPQLQK--IYHKNSVNNILKYINSN---I 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHM----RVSPNSWSVYARPSKVIKKGDILH 116
FNN+K +++ E E+S + R+ N ++ SK G+
Sbjct: 56 FNNSKARKSRIYA---------ESEMSSNVEFLILDRIGTNLFTALVSKSKKQIIGNFYK 106
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFS--ISGIELERQISLVGTIPLPPYIARKRPIDA 174
F +G L ++ K N+ E++L F+ + E+ +PLP YI KR D
Sbjct: 107 F--PEG---LMGEILSK-NSSEVVLKFNNDVGEDYFEKHC----FVPLPSYI--KRDYDK 154
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D YQT Y+K GS A+ TA LHF+ +L S + I+ F+TLHVG GTF+PV+ +
Sbjct: 155 IDEDRYQTIYSKYVGSAASATAELHFSIDLFSVFENNNIEYDFITLHVGLGTFLPVRSKK 214
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFT 293
++H MH E I A L + K G +I+S+ TT+LR LE++ + T
Sbjct: 215 VEEHNMHFETFLIKDFVAVRLQNAKLLGKKILSIVTTTLRALESSYDNNLKKFKTGKQST 274
Query: 294 NIFITPG--YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
N+FI PG Y F+ D+L +NFH+P+STLLMLVS+F G + Y+ A++ Y+F+SYG
Sbjct: 275 NLFIYPGKNYCFKFFDMLFTNFHIPQSTLLMLVSSFAGKDFVFSSYEEAVNKGYKFFSYG 334
Query: 352 DTSLL 356
D L+
Sbjct: 335 DAMLI 339
>gi|15611431|ref|NP_223082.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori J99]
gi|7674181|sp|Q9ZM60|QUEA_HELPJ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|4154891|gb|AAD05941.1| S-ADENOSYLMETHIONINE TRNA RIBOSYLTRANSFERASE-ISOMERASE
[Helicobacter pylori J99]
Length = 345
Score = 183 bits (464), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 124/359 (34%), Positives = 192/359 (53%), Gaps = 25/359 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D+ LP IA PV P++ A+L+V I+ + F N +V N
Sbjct: 6 LESYDYHLPKELIANYPVLPKEKAKLLVYERRSQT---ITHTTFEHVLDFFPKNALVVLN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKVI A+L G + + + E+ H N+ + IK GD + F
Sbjct: 63 DTKVIKARLFGSKHAFLPSKTTEV--FFHRFFKGNTALTQIKGK--IKVGDKIFF----- 113
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQ-----ISLVGTIPLPPYIARKRPIDARDY 177
+ A V++ + G+ L+ F + L ++ + G +PLPPYI KR ++ D
Sbjct: 114 DANYYAEVLELLHNGQRLIAFYDNQTPLNQENILKLLEQYGHMPLPPYI--KRADESLDA 171
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
+YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+ +D +
Sbjct: 172 HEYQSVFAKHIGAVAAPTASLHFSQNALEKLLK-DFKHAFLTLHVGAGTFLSVETKDIRE 230
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H +H+E+ I + + L ++ +GTT+LR +E N S +IF+
Sbjct: 231 HQIHTEVLHIPKKSQEIL----QESQEVLCIGTTALRSVEYFKRLKNP-NQESFECDIFL 285
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ V+ L++NFHLPKS+LLMLVSA G+E+TK++Y+ AI YRFYSYGD L+
Sbjct: 286 HLANPIQHVNHLLTNFHLPKSSLLMLVSAMIGLEKTKEIYKIAIEKKYRFYSYGDGMLI 344
>gi|298480286|ref|ZP_06998484.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. D22]
gi|298273567|gb|EFI15130.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. D22]
Length = 406
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 130/415 (31%), Positives = 203/415 (48%), Gaps = 81/415 (19%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ E+ + LP RIA P+ RD ++L++ +S+ + + LP +L ++FN
Sbjct: 10 ISEYSYPLPDERIAKFPLPTRDQSKLLIYRRE-----EVSEDVFTSLPEYLPQGSLMIFN 64
Query: 63 NTKVITAQLNGVR--------FCH---------INRREKEISCTLHMRVSPNSWSVYARP 105
NTKVI A+L+ + FC +N ++ + L M + W
Sbjct: 65 NTKVIQARLHFRKETGALIEVFCLEPIQPNDYVLNFQQTAHAAWLCMIGNLKKWKDGQLK 124
Query: 106 SKVIKKGDILHFFSQDGQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPP 164
++ KG + + G+ + + +D W+ E+ + + I + + G +P+PP
Sbjct: 125 REMTVKGFPITLTATRGECKGTSHWVDFAWDNPEV----TFADI-----LEVFGELPIPP 175
Query: 165 YIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
Y+ R + D YQT Y+KI+GSVAAPTAGLHFT +L L GI + +TLHVGA
Sbjct: 176 YLNRD--TEESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALQEKGIDLEELTLHVGA 233
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET------ 278
GTF PVK E+ + H MH+E ++ T + L G ++VGTTS+R LE+
Sbjct: 234 GTFKPVKSEEIEGHEMHTEYISVNRSTIKKL---IDHDGCAIAVGTTSVRTLESLYHIGV 290
Query: 279 -------ATTEDGIINPWSGF------------------------------TNIFITPGY 301
AT E+ + W + T I I PGY
Sbjct: 291 TLAENPYATEEELRVKQWQPYEKYDQIPPVVALQKILGYLDRNGLETLHTSTQIIIAPGY 350
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
++ V +++NFH P+STLL+LVSAF + +Y +A++H +RF SYGD+SLL
Sbjct: 351 NYKIVKAMVTNFHQPQSTLLLLVSAFVK-GNWRTIYDYALAHDFRFLSYGDSSLL 404
>gi|260912482|ref|ZP_05919018.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
sp. oral taxon 472 str. F0295]
gi|260633401|gb|EEX51555.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
sp. oral taxon 472 str. F0295]
Length = 407
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 140/417 (33%), Positives = 202/417 (48%), Gaps = 82/417 (19%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+K++++DLP RIA P+ RD ++L+V + +S + S++ +L +VFN
Sbjct: 8 IKDYNYDLPDERIAKFPLPERDKSKLLVYNHG-----EVSQDVFSNITRYLPQGALMVFN 62
Query: 63 NTKVITAQLNGVR----FCHINRREKEISC---TLHMRVSPNSWSVYARPSKVIKKGDIL 115
NTKVI A+L+ + I E + + SW K K G +
Sbjct: 63 NTKVIQARLHFRKETGSLIEIFLLEPALPADYEQMFQTTGACSWYCLVGNLKKWKSGPLT 122
Query: 116 HFFSQDGQSRLE-----------ATVID-KWNTGEILLVFSISGIELERQISLVGTIPLP 163
GQ ++ A ID KW TG+ L F+ EL I VG +P+P
Sbjct: 123 TTVEMPGQPSVQLSAERDMSCETALKIDFKW-TGDDKLSFA----EL---IDKVGELPIP 174
Query: 164 PYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVG 223
PY+ R D YQT Y+KI+GSVAAPTAGLHFT +L+ + GI +TLHVG
Sbjct: 175 PYLNRN--TQESDKTTYQTVYSKIKGSVAAPTAGLHFTQKVLADIDQHGIDREELTLHVG 232
Query: 224 AGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET----- 278
AGTF PVK E+ + H MH+E I T L + V+VGTTS+R LE+
Sbjct: 233 AGTFKPVKSEEIEGHAMHTEYVCIRRST---LEKLLQHNCEAVAVGTTSVRTLESLYYMG 289
Query: 279 --------ATTEDGIINPWSGF-------------------------------TNIFITP 299
+ + +N W + T I I P
Sbjct: 290 CKVKANPNVSLDQLHVNQWEPYASTTTTITPAEAIGELIAYMDRNNLPSLHSSTQIIIAP 349
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+++ V L++NFH P+STLL+LVSAF G + K +Y++A+ + +RF SYGD+S+L
Sbjct: 350 GYQYKIVKRLITNFHQPQSTLLLLVSAFVG-GDWKSIYRYALDNDFRFLSYGDSSIL 405
>gi|317177197|dbj|BAJ54986.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori F16]
Length = 345
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 122/360 (33%), Positives = 194/360 (53%), Gaps = 25/360 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D++LP IA P+ P++ A+L+V I+ + F N +V N
Sbjct: 6 LESYDYNLPKELIANYPILPKEKAKLLVYERRSQK---ITHTTFEHVLDFFPKNALVVLN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKVI A+L G + + + E+ H N+ + IK GD + F
Sbjct: 63 DTKVIKARLFGSKHALLPSKTTEV--FFHRFFKDNTALTQIKGK--IKVGDKIFF----- 113
Query: 123 QSRLEATVIDKWNTGEILLVF-----SISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+ A V++ + G+ L+ F ++ + + + G +PLPPYI KR ++ D
Sbjct: 114 DAHYYAEVLELLHNGQRLIAFYGNKTPLNQANILKLLEQYGHMPLPPYI--KRADESLDA 171
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
+YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+ +D +
Sbjct: 172 HEYQSVFAKHMGAVAAPTASLHFSQNTLEKLLK-DFKHAFLTLHVGAGTFLGVETKDIRE 230
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H +H+E+ I + + L + ++ +GTT+LR +E + N + +IF+
Sbjct: 231 HQIHTEVLRIPKKSQEIL----QKSQEVLCIGTTALRSVEYFKRLENP-NQEAFECDIFL 285
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
V+ L++NFHLPKS+LLMLVSA G+E+TK++YQ AI YRFYSYGD L+
Sbjct: 286 HLANPILHVNHLLTNFHLPKSSLLMLVSAMIGLEKTKEIYQIAIEKKYRFYSYGDGMLIL 345
>gi|317012224|gb|ADU82832.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori Lithuania75]
Length = 345
Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 125/359 (34%), Positives = 192/359 (53%), Gaps = 25/359 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D+ LP IA P+ P++ A+L+V I+ + F N IV N
Sbjct: 6 LESYDYYLPKELIANYPILPKEKAKLLVYERRSQK---ITHTTFEHVLDFFPKNALIVLN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKVI A+L G + + + E+ R N+ ++ K IK GD + F
Sbjct: 63 DTKVIKARLFGSKHAFLPSKTTEV---FFHRFFKNNTALTQIKGK-IKVGDKIFF----- 113
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQ-----ISLVGTIPLPPYIARKRPIDARDY 177
+ A V++ + G+ L+ F L ++ + G +PLPPYI KR ++ D
Sbjct: 114 DTNYHAEVLELLHNGQRLIAFYDHKTPLNQENILKLLEQYGHMPLPPYI--KRADESLDA 171
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
+YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+ +D +
Sbjct: 172 HEYQSVFAKHMGAVAAPTASLHFSQNTLEKLLK-DFKHAFLTLHVGAGTFLGVETKDIRE 230
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H +H+E+ I + + L I+ +GTT+LR +E N S +IF+
Sbjct: 231 HQIHTEVLHIPKKSQEIL----QESQEILCIGTTALRSVEYFKRLKNP-NQESFECDIFL 285
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
V+ L++NFHLPKS+LLMLVSA G+++TK++Y+ AI YRFYSYGD L+
Sbjct: 286 HLANPILHVNYLLTNFHLPKSSLLMLVSAMIGLDKTKEIYKIAIEKKYRFYSYGDGMLI 344
>gi|288800160|ref|ZP_06405619.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
sp. oral taxon 299 str. F0039]
gi|288333408|gb|EFC71887.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
sp. oral taxon 299 str. F0039]
Length = 404
Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 129/410 (31%), Positives = 197/410 (48%), Gaps = 71/410 (17%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+K+++++LP RIA P RD +++++ + I + + ++ FL +VFN
Sbjct: 8 IKDYNYELPDERIAKFPKSERDHSKILIYNKG-----DIVEDIFYNIVNFLPEKALMVFN 62
Query: 63 NTKVITAQLN-------GVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
NTKVI A+L+ + + E + R W K K+G +
Sbjct: 63 NTKVIQARLHFQKQSGAHIEIFLLEPAEPFDYELMFQRKEQCVWVCMIGNLKKWKEGVLT 122
Query: 116 HFFSQDGQS------RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARK 169
+G S RLE + ++ L + + + I ++G +P+PPY+
Sbjct: 123 KEIEINGHSVTIKVERLEQV----GASHKVCLSWDDTSLSFAELIDVIGELPIPPYL--N 176
Query: 170 RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
R D YQT Y+KI+GSVAAPTAGLHFT ++LS + GI +TLHVGAGTF P
Sbjct: 177 RDTQESDKTTYQTVYSKIKGSVAAPTAGLHFTKDVLSEIDKKGIVREELTLHVGAGTFKP 236
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET----------- 278
VK E +H MH+E + T L +++ ++VGTTS+R LE+
Sbjct: 237 VKSELISEHDMHTEYISVSKST---LETLRKFNASAIAVGTTSVRTLESLYYIGLKLHKN 293
Query: 279 --ATTEDGIINPWSGF------------------------------TNIFITPGYRFRAV 306
E+ + W + T I I PGY ++ V
Sbjct: 294 PHLIDEELAVKQWEPYEQTTNVTALEAINAIIKYLDENDLDTLHSSTQIMIAPGYEYKIV 353
Query: 307 DILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+L++NFH P+STLL+LVSAF G + K+Y +A+ H +RF SYGD+SLL
Sbjct: 354 KMLVTNFHQPQSTLLLLVSAFIG-DNWHKVYNYALEHDFRFLSYGDSSLL 402
>gi|303235656|ref|ZP_07322263.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella disiens FB035-09AN]
gi|302484103|gb|EFL47091.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella disiens FB035-09AN]
Length = 430
Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 132/423 (31%), Positives = 202/423 (47%), Gaps = 80/423 (18%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+ LP RIA P+ RD ++L++ +S+ + +LP +L + +VFN
Sbjct: 17 ISDYDYPLPDERIAKFPLNQRDQSKLLLYKHG-----EVSEDVFCNLPKYLPNGALMVFN 71
Query: 63 NTKVITAQLNGVR----FCHINRREKEISCTLHMRVSPNS---WSVYARPSKVIKKGDIL 115
NTKVI A+++ + I E + NS W K K+G++
Sbjct: 72 NTKVIQARMHFRKETGALIEIFLMEPAQPTDYELMFQTNSECSWLCMIGNLKKWKEGELR 131
Query: 116 HFFSQDGQSRLEATVIDKWNTGEIL--------LVFSISGIELERQISLVGTIPLPPYIA 167
F +G + +D+ ++ + + + + VG +P+PPY+
Sbjct: 132 RSFEINGNKLVLTVSVDRSKASDLAGGTNHWVDFKWDNAKVSFAEILEAVGELPIPPYLN 191
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R+ D YQT Y+KI+GSVAAPTAGLHFT +L +L GI +TLHVGAGTF
Sbjct: 192 RE--TQESDKETYQTVYSKIKGSVAAPTAGLHFTDAVLEQLDKAGILRDELTLHVGAGTF 249
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK + + H MH+E + T L ++ S ++VGTTS+R LE+
Sbjct: 250 KPVKSSEIEGHNMHTEYIVVHRHT---LENLLSHDCSAIAVGTTSVRTLESLYYMGVKLE 306
Query: 279 ----ATTEDGIINPW---------SGF--------------------------------T 293
AT +D +N W GF T
Sbjct: 307 RNANATEDDLHVNQWEPYDENVTEEGFIKVNGQVVTAQKAIQNLLDYLKKDDLEALHSST 366
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
I I PG++++ V +L++NFH P+STLL+LVSAF + K+Y +A+ H +RF SYGD+
Sbjct: 367 QIIIAPGFQYKIVKMLVTNFHQPQSTLLLLVSAFLH-GDWHKVYDYALQHDFRFLSYGDS 425
Query: 354 SLL 356
SLL
Sbjct: 426 SLL 428
>gi|307637081|gb|ADN79531.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori 908]
gi|325995672|gb|ADZ51077.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori 2018]
gi|325997268|gb|ADZ49476.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori 2017]
Length = 345
Score = 182 bits (462), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 125/359 (34%), Positives = 194/359 (54%), Gaps = 25/359 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D+ LP IA PV P++ A+L+V I+ + F N +V N
Sbjct: 6 LESYDYHLPKELIANYPVLPKEKAKLLVYERRSQT---ITHTTFEHVLDFFPKNALVVLN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKVI A+L G + + + E+ H N+ + IK GD + FF ++
Sbjct: 63 DTKVIKARLFGSKHAFLPSKTTEV--FFHRFFKGNTALTQIKGK--IKAGDKI-FFDEN- 116
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQ-----ISLVGTIPLPPYIARKRPIDARDY 177
A V++ + G+ L+ F + L ++ + G +PLPPYI KR ++ D
Sbjct: 117 ---YYAEVLELLHNGQRLIAFYDNQTPLTQENILKLLEQYGHMPLPPYI--KRADESLDV 171
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
+YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+ +D +
Sbjct: 172 HEYQSVFAKHIGAVAAPTASLHFSQNTLEKLLK-DFKHAFLTLHVGAGTFLSVETKDIRE 230
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H +H+E+ I + + L I+ +GTT+LR +E N S +IF+
Sbjct: 231 HQIHTEVLHIPKKSQEILQE----SQEILCIGTTALRSVEYFKRLKNP-NQESFECDIFL 285
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ V+ L++NFHLPKS+LL+LVSA G+E+TK++Y+ AI YRFYSYGD L+
Sbjct: 286 HLANPIQHVNHLLTNFHLPKSSLLILVSAMIGLEKTKEIYKIAIEKKYRFYSYGDGMLI 344
>gi|182413854|ref|YP_001818920.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Opitutus
terrae PB90-1]
gi|177841068|gb|ACB75320.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Opitutus
terrae PB90-1]
Length = 398
Score = 182 bits (462), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 134/396 (33%), Positives = 194/396 (48%), Gaps = 56/396 (14%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
FD++LPP IA P RD +RL+V+ ++ H ++LP FL + D + NN
Sbjct: 15 FDYELPPRLIAQTPAERRDRSRLLVID---RATRKLAHHTFAELPKFLRAGDTLFRNNAA 71
Query: 66 VITAQLNGVR------FCHINRRE----------------KEISCTLHMRVSPNSWSVYA 103
V+ A+L+ R C + ++E + I + R W
Sbjct: 72 VLPARLHARRPTGGEVECFLLQQEPTAGSGTGVPPVIQPAEAIQSSRAGRPCHEIWRCLI 131
Query: 104 RPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLV----GT 159
+P + + G F+ ++ +++K G + F+ S R I+ V G
Sbjct: 132 KPGRRLAVGAT---FAHPSKA-FTGEILEKHADGTAQVRFTTSD---HRPITAVANELGD 184
Query: 160 IPLPPYIARK--RPIDAR----DYVDYQTTYAKI--QGSVAAPTAGLHFTSNLLSRLISI 211
+PLPPYI R P R D YQT YA Q +VAAPTAGLHFT LL+ L ++
Sbjct: 185 VPLPPYIERDPHAPDHDRQRQLDLSRYQTVYANAARQVAVAAPTAGLHFTPELLAALTAM 244
Query: 212 GIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTT 271
G++ VTLHVG GTF P+ ++H +H E+ I A T +AL + GR ++VGTT
Sbjct: 245 GVRTADVTLHVGLGTFQPISTATIEEHRIHRELYEIPASTQRALFPPLT--GRRIAVGTT 302
Query: 272 SLRLLETATTEDGIINPWSGF----TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAF 327
S+R +E ++ P IFI P F VD L++NFH P+STLL LVSAF
Sbjct: 303 SVRTIEDFLSQHSTPRPEEAAHVAEAGIFIYPPREFCGVDALITNFHQPRSTLLCLVSAF 362
Query: 328 C------GIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GI +++Y AI+ YRF+SYGD L+
Sbjct: 363 LTPGSTDGIAWIREIYAEAIAREYRFFSYGDAMLIL 398
>gi|237714439|ref|ZP_04544920.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. D1]
gi|262408269|ref|ZP_06084816.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 2_1_22]
gi|294645388|ref|ZP_06723097.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides ovatus SD CC 2a]
gi|294806152|ref|ZP_06765004.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides xylanisolvens SD CC 1b]
gi|229445603|gb|EEO51394.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. D1]
gi|262353821|gb|EEZ02914.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 2_1_22]
gi|292639280|gb|EFF57589.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides ovatus SD CC 2a]
gi|294446666|gb|EFG15281.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides xylanisolvens SD CC 1b]
Length = 406
Score = 182 bits (462), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 131/415 (31%), Positives = 203/415 (48%), Gaps = 81/415 (19%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ E+ + LP RIA P+ RD ++L++ IS+ + + LP +L ++FN
Sbjct: 10 ISEYSYPLPDERIAKFPLPTRDQSKLLIYRRG-----EISEDVFTSLPEYLLQGSLMIFN 64
Query: 63 NTKVITAQLNGVR--------FCH---------INRREKEISCTLHMRVSPNSWSVYARP 105
NTKVI A+L+ + FC +N ++ + L M + W
Sbjct: 65 NTKVIQARLHFRKETGALIEVFCLEPIQPNDYVLNFQQTAHAAWLCMIGNLKKWKDGQLK 124
Query: 106 SKVIKKGDILHFFSQDGQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPP 164
++ KG + + G+ + + +D W+ E+ + + I + + G +P+PP
Sbjct: 125 REMTVKGFPITLTATRGECKGTSHWVDFAWDNPEV----TFADI-----LEVFGELPIPP 175
Query: 165 YIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
Y+ R + D YQT Y+KI+GSVAAPTAGLHFT +L L GI + +TLHVGA
Sbjct: 176 YLNRD--TEESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALQEKGIDLEELTLHVGA 233
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET------ 278
GTF PVK E+ + H MH+E ++ T + L G ++VGTTS+R LE+
Sbjct: 234 GTFKPVKSEEIEGHEMHTEYISVNRSTIKKL---IDHDGCAIAVGTTSVRTLESLYHIGV 290
Query: 279 -------ATTEDGIINPWSGF------------------------------TNIFITPGY 301
AT E+ + W + T I I PGY
Sbjct: 291 TLAENPYATEEELRVKQWQPYEKYDQIPPVVALQKILGYLDRNGLETLHTSTQIIIAPGY 350
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
++ V +++NFH P+STLL+LVSAF + +Y +A++H +RF SYGD+SLL
Sbjct: 351 NYKIVKAMVTNFHQPQSTLLLLVSAFVK-GNWRTIYDYALAHDFRFLSYGDSSLL 404
>gi|313149103|ref|ZP_07811296.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
fragilis 3_1_12]
gi|313137870|gb|EFR55230.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
fragilis 3_1_12]
Length = 406
Score = 182 bits (462), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 132/415 (31%), Positives = 203/415 (48%), Gaps = 81/415 (19%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ E+++ LP RIA P+ RD ++L++ +S+ + + LP L + ++FN
Sbjct: 10 ISEYNYSLPDERIAKFPLPMRDQSKLLIYRHG-----EVSEDVFTSLPEHLPAGSLMIFN 64
Query: 63 NTKVITAQLNGVR--------FCH---------INRREKEISCTLHMRVSPNSWSVYARP 105
NTKVI A+L+ + FC +N ++ E + L M + W
Sbjct: 65 NTKVIQARLHFRKETGALIEVFCLEPIQPNDYVLNFQQTEHAAWLCMIGNLKKWKDGPLR 124
Query: 106 SKVIKKGDILHFFSQDGQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPP 164
++ KG + + G+ R + ID W+ E+ + + I + + G +P+PP
Sbjct: 125 REMTVKGFPITLTATRGECRGTSHWIDFNWDNPEV----TFADI-----LEVFGELPIPP 175
Query: 165 YIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
Y+ R + D YQT Y+KI+GSVAAPTAGLHFT +L L GI + +TLHVGA
Sbjct: 176 YLNRD--TEESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALTEKGIDLEELTLHVGA 233
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET------ 278
GTF PVK E+ + H MH+E +I + + + ++VGTTS+R LE+
Sbjct: 234 GTFKPVKSEEIEGHEMHTE--YISV-SRSIIKKLIDHDACAIAVGTTSVRTLESLYHIGV 290
Query: 279 -------ATTEDGIINPWSGF------------------------------TNIFITPGY 301
AT E + W + T I I PGY
Sbjct: 291 TLANNPEATEEQLRVKQWQPYETECDVRPVVALQKILGYLDRHGMEALHTSTQIIIAPGY 350
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
++ V +++NFH P+STLL+LVSAF + +Y +A+SH +RF SYGD+SLL
Sbjct: 351 EYKIVKAMVTNFHQPQSTLLLLVSAFVK-GNWRTIYDYALSHDFRFLSYGDSSLL 404
>gi|255011292|ref|ZP_05283418.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides fragilis 3_1_12]
Length = 407
Score = 182 bits (462), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 132/415 (31%), Positives = 203/415 (48%), Gaps = 81/415 (19%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ E+++ LP RIA P+ RD ++L++ +S+ + + LP L + ++FN
Sbjct: 11 ISEYNYSLPDERIAKFPLPMRDQSKLLIYRHG-----EVSEDVFTSLPEHLPAGSLMIFN 65
Query: 63 NTKVITAQLNGVR--------FCH---------INRREKEISCTLHMRVSPNSWSVYARP 105
NTKVI A+L+ + FC +N ++ E + L M + W
Sbjct: 66 NTKVIQARLHFRKETGALIEVFCLEPIQPNDYVLNFQQTEHAAWLCMIGNLKKWKDGPLR 125
Query: 106 SKVIKKGDILHFFSQDGQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPP 164
++ KG + + G+ R + ID W+ E+ + + I + + G +P+PP
Sbjct: 126 REMTVKGFPITLTATRGECRGTSHWIDFNWDNPEV----TFADI-----LEVFGELPIPP 176
Query: 165 YIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
Y+ R + D YQT Y+KI+GSVAAPTAGLHFT +L L GI + +TLHVGA
Sbjct: 177 YL--NRDTEESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALTEKGIDLEELTLHVGA 234
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET------ 278
GTF PVK E+ + H MH+E +I + + + ++VGTTS+R LE+
Sbjct: 235 GTFKPVKSEEIEGHEMHTE--YISV-SRSIIKKLIDHDACAIAVGTTSVRTLESLYHIGV 291
Query: 279 -------ATTEDGIINPWSGF------------------------------TNIFITPGY 301
AT E + W + T I I PGY
Sbjct: 292 TLANNPEATEEQLRVKQWQPYETECDVRPVVALQKILGYLDRHGMEALHTSTQIIIAPGY 351
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
++ V +++NFH P+STLL+LVSAF + +Y +A+SH +RF SYGD+SLL
Sbjct: 352 EYKIVKAMVTNFHQPQSTLLLLVSAFVK-GNWRTIYDYALSHDFRFLSYGDSSLL 405
>gi|139439012|ref|ZP_01772472.1| Hypothetical protein COLAER_01478 [Collinsella aerofaciens ATCC
25986]
gi|133775723|gb|EBA39543.1| Hypothetical protein COLAER_01478 [Collinsella aerofaciens ATCC
25986]
Length = 403
Score = 182 bits (462), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 131/412 (31%), Positives = 196/412 (47%), Gaps = 66/412 (16%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLS---CPL----VISDHLVSDLPAFL 53
M +FD++LP IA P PRDS RL+VV S PL + + D+ ++
Sbjct: 1 MRTDDFDYNLPEELIAQAPAEPRDSCRLLVVDRKGSQAGTPLEHGGTVEHRIFRDIIDYI 60
Query: 54 NSNDAIVFNNTKVITAQL-------NGVRFCHINRREKEISCTLHMRVSPNSWSVYARPS 106
D +V N T+V+ A+L GV + +R +++ H+ W +P
Sbjct: 61 EPGDVLVINQTRVMPARLIGRKTGSGGVVETLLLKRREDVDPLGHV------WECLVKPG 114
Query: 107 KVIKKGDILHFFSQDGQSR------LEATVID--KWNTGEILLVFSISGIE-------LE 151
K +K G + + + + L A V+D + G L+ F +G L+
Sbjct: 115 KRLKPGAQIEYRAGGAHAPEGAPVVLTAEVVDFVTDSRGGRLVRFEPAGCNAAGDPRTLD 174
Query: 152 RQISLVGTIPLPPYIARKRPIDARDYVDYQTTYA-KIQGSVAAPTAGLHFTSNLLSRLIS 210
I G +PLPPYI D YQT YA K + S AAPTAGLHFT L++ + +
Sbjct: 175 EAIHAAGHVPLPPYITDYE----GDPEKYQTVYAMKEEHSAAAPTAGLHFTPELMAAIEA 230
Query: 211 IGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGT 270
G K V L VG TF V+ +D H+MH+E + A++ K+ G R+++VGT
Sbjct: 231 KGAKFAAVELEVGIDTFRLVEEDDPTQHVMHTERYHVSQEVVDAVHKAKAEGHRVIAVGT 290
Query: 271 TSLRLLETA------------------TTEDG--------IINPWSGFTNIFITPGYRFR 304
T++R LE+A EDG I+ S T +++ PG +
Sbjct: 291 TAVRSLESAFDTDAPVSDPAVTARYFEGREDGADTLGRGDIVVRESATTQLYLMPGSTYH 350
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
VD L++NFH+P+STL+MLVSA ++ Y AI YRF+S+GD L+
Sbjct: 351 VVDALITNFHVPRSTLMMLVSALATRDQIMDAYAAAIEERYRFFSFGDAMLI 402
>gi|217031611|ref|ZP_03437116.1| hypothetical protein HPB128_21g169 [Helicobacter pylori B128]
gi|298736674|ref|YP_003729202.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori B8]
gi|216946811|gb|EEC25407.1| hypothetical protein HPB128_21g169 [Helicobacter pylori B128]
gi|298355866|emb|CBI66738.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori B8]
Length = 345
Score = 182 bits (461), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 124/359 (34%), Positives = 195/359 (54%), Gaps = 25/359 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D+DLP IA P+ P++ A+L+V I+ + F N +V N
Sbjct: 6 LESYDYDLPKELIANYPILPKEKAKLLVYERRSQ---KITHTTFEHVLDFFPKNALVVLN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKVI A+L G + + + E+ R N+ ++ K IK GD + F
Sbjct: 63 DTKVIKARLFGSKHAFLPSKTTEV---FFHRFFKNNTALTQIKGK-IKVGDKIFF----- 113
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQ-----ISLVGTIPLPPYIARKRPIDARDY 177
+ A V++ + G+ L+ F + L ++ + G +PLPPYI KR ++ D
Sbjct: 114 DANYYAEVLELLHNGQRLIAFYDNQTPLNQENILKLLEQYGHMPLPPYI--KRADESLDA 171
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
+YQ+ +AK G+VAAPTA LHF+ + L +L+ K F+TLHVGAGTF+ V+ +D +
Sbjct: 172 HEYQSVFAKHIGAVAAPTASLHFSQHCLEKLLK-DFKHAFLTLHVGAGTFLGVETKDIRE 230
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H +H+E+ I + + L + I+ +GTT+LR +E N S +IF+
Sbjct: 231 HQIHTEVLHIPKKSQEILRESQE----ILCIGTTALRSVEYFKRLKNP-NQESFECDIFL 285
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
V+ L++NFHLPKS+LLMLVSA G+++TK++Y+ AI YRFYSYGD L+
Sbjct: 286 HLANPILHVNYLLTNFHLPKSSLLMLVSAMIGLDKTKEIYKIAIEKKYRFYSYGDGMLI 344
>gi|224535925|ref|ZP_03676464.1| hypothetical protein BACCELL_00789 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522453|gb|EEF91558.1| hypothetical protein BACCELL_00789 [Bacteroides cellulosilyticus
DSM 14838]
Length = 409
Score = 182 bits (461), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 131/418 (31%), Positives = 205/418 (49%), Gaps = 84/418 (20%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ EF++ LP RIA P+ RD ++L+V +S+ + LP++L + ++FN
Sbjct: 10 ISEFNYPLPDERIAKFPLPVRDQSKLLVYRHG-----EVSEDRFTSLPSYLPTGSLMIFN 64
Query: 63 NTKVITAQLNGVR--------FCH---------INRREKEISCTLHMRVSPNSWSVYARP 105
NTKVI A+L+ + FC +N ++ E + L M + W
Sbjct: 65 NTKVIQARLHFRKETGALIEVFCLEPIEPNDYVLNFQQTEHAAWLCMIGNLKKWKEGTLK 124
Query: 106 SKVIKKGDILHFFSQDGQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPP 164
++ K + + G+ + +D +W+ EI + + I + + G +P+PP
Sbjct: 125 REMTVKEQPITLTATRGECHGTSHWVDFRWDNPEI----TFADI-----LEVFGELPIPP 175
Query: 165 YIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
Y+ R D YQT Y+KI+GSVAAPTAGLHFT +L+ L G+ + +TLHVGA
Sbjct: 176 YL--NRDTQESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLNALKEKGVDLEELTLHVGA 233
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET------ 278
GTF PVK + + H MH+E + T + L G+ ++VGTTS+R LE+
Sbjct: 234 GTFKPVKSAEIEGHEMHTEYISVSRGTIENL---IVHNGKAIAVGTTSVRTLESLYHIGV 290
Query: 279 -------ATTEDGIINPWSGF---------------------------------TNIFIT 298
AT E+ ++ W + T I I
Sbjct: 291 TLLKNPNATEEELHVHQWQPYETAEETASITSVKALQAILDYLNRHDMEALHTSTQIIIA 350
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY ++ V+ +++NFH P+STLL+LVSAF + +Y A++H +RF SYGD+SLL
Sbjct: 351 PGYDYKIVNTMVTNFHQPQSTLLLLVSAFVK-GNWRNIYDFALNHDFRFLSYGDSSLL 407
>gi|108562810|ref|YP_627126.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori HPAG1]
gi|122386664|sp|Q1CUC0|QUEA_HELPH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|107836583|gb|ABF84452.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori HPAG1]
Length = 345
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 124/359 (34%), Positives = 191/359 (53%), Gaps = 25/359 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D+ LP IA PV P++ A+L+V I+ + F N +V N
Sbjct: 6 LESYDYYLPKELIANYPVLPKEKAKLLVYERRSQK---ITHTTFEHVLDFFPKNALVVLN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKV+ A+L G + + + E+ H N+ + IK GD + F
Sbjct: 63 DTKVMKARLFGSKHALLPSKTTEV--FFHRFFKDNTALTQIKGK--IKAGDKIFF----- 113
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQ-----ISLVGTIPLPPYIARKRPIDARDY 177
+ A V++ + G+ L+ F L ++ + G +PLPPYI KR ++ D
Sbjct: 114 DANYHAEVLELLHNGQRLIAFYNHKTPLNQENILKLLEQYGHMPLPPYI--KRTDESLDA 171
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
+YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+ +D +
Sbjct: 172 HEYQSVFAKHIGAVAAPTASLHFSQNTLEKLLK-DFKHAFLTLHVGAGTFLGVETKDIRE 230
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H +H+EI I + + L ++ +GTT+LR +E N S +IF+
Sbjct: 231 HQIHTEILHIPKKSQEILRE----SQEVLCIGTTALRSVEYFKRLKNS-NQESFECDIFL 285
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ V+ L++NFHLPKS+LLMLVSA G+E+TK++Y+ AI YRFYSYGD L+
Sbjct: 286 HLANPIQHVNYLLTNFHLPKSSLLMLVSAMIGLEKTKEIYKIAIEKKYRFYSYGDGMLI 344
>gi|296273412|ref|YP_003656043.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase [Arcobacter
nitrofigilis DSM 7299]
gi|296097586|gb|ADG93536.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase [Arcobacter
nitrofigilis DSM 7299]
Length = 345
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 130/356 (36%), Positives = 192/356 (53%), Gaps = 30/356 (8%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
+D+ LP IA +P++P DSARL+V + N I+ L FL N I N+TK
Sbjct: 14 YDYFLPKELIASKPLYPADSARLLVYNRNSDT---ITHTTYKYLLDFLPENLDIFLNDTK 70
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSR 125
VI A++ G + + E + L M + + V + ++KG L F
Sbjct: 71 VIKARIYGKKDSG-GKTELLFNKPLFM----DRYQVMIKGK--VQKGTKLFFDENLSAEV 123
Query: 126 LEATVID-----KWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
LE D K+ E L F +S I++ ++ +G +PLP Y+ R+ + D DY
Sbjct: 124 LELNNEDGTRTVKFFKDEKQLDF-LSLIDI---LNKIGHLPLPHYMNRED--EKEDEKDY 177
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +AK G+VAAPTA LHFT LL +L + + ++TLHVGAGTF PV ED +H M
Sbjct: 178 QTLFAKNYGAVAAPTASLHFTDELLEKLHNKH-NINYLTLHVGAGTFKPVDAEDILNHPM 236
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I + +AL + ++VGTT R +E N G ++F+ P
Sbjct: 237 HSEYFEISRESLEAL----KEKNKTLAVGTTVTRTIEYYAR----TNKIQGECDLFLNPA 288
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ VD L++NFHLPKSTL+ML+++F G+E+T ++Y+ A+ YRF+SYGD L+
Sbjct: 289 NKPIKVDHLLTNFHLPKSTLIMLIASFVGLEKTLEIYETAVKDKYRFFSYGDGMLI 344
>gi|237719212|ref|ZP_04549693.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 2_2_4]
gi|229451591|gb|EEO57382.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 2_2_4]
Length = 406
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 130/415 (31%), Positives = 203/415 (48%), Gaps = 81/415 (19%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ E+ + LP RIA P+ RD ++L++ +S+ + + LP +L ++FN
Sbjct: 10 ISEYSYPLPDERIAKFPLPTRDQSKLLIYRRG-----EVSEDVFTSLPEYLPQGSLMIFN 64
Query: 63 NTKVITAQLNGVR--------FCH---------INRREKEISCTLHMRVSPNSWSVYARP 105
NTKVI A+L+ + FC +N ++ + L M + W
Sbjct: 65 NTKVIQARLHFRKETGALIEVFCLEPIQPNDYVLNFQQTVHAAWLCMIGNLKKWKDGQLK 124
Query: 106 SKVIKKGDILHFFSQDGQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPP 164
++ KG + + G+ + + +D W+ E+ + + I + + G +P+PP
Sbjct: 125 REMTVKGFPITLTATRGECKGTSHWVDFAWDNPEV----TFADI-----LEVFGELPIPP 175
Query: 165 YIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
Y+ R + D YQT Y+KI+GSVAAPTAGLHFT +L L GI + +TLHVGA
Sbjct: 176 YLNRD--TEESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALQEKGIDLEELTLHVGA 233
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET------ 278
GTF PVK E+ + H MH+E ++ T + L G ++VGTTS+R LE+
Sbjct: 234 GTFKPVKSEEIEGHEMHTEYISVNRSTIKKL---IDHDGCAIAVGTTSVRTLESLYHIGV 290
Query: 279 -------ATTEDGIINPWSGF------------------------------TNIFITPGY 301
AT E+ + W + T I I PGY
Sbjct: 291 TLAENPYATEEELRVKQWQPYEKYDQIPPVVALQKILGYLDRNGLETLHTSTQIIIAPGY 350
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
++ V +++NFH P+STLL+LVSAF + +Y +A++H +RF SYGD+SLL
Sbjct: 351 NYKIVKAMVTNFHQPQSTLLLLVSAFVK-GNWRTIYDYALAHDFRFLSYGDSSLL 404
>gi|302346566|ref|YP_003814864.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella melaninogenica ATCC 25845]
gi|302150780|gb|ADK97041.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella melaninogenica ATCC 25845]
Length = 423
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 131/424 (30%), Positives = 196/424 (46%), Gaps = 82/424 (19%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ ++++ LP RIA P+ RD ++L++ H + +S+ + +LP +L +VF
Sbjct: 10 ISDYNYPLPDERIAKFPLTERDHSKLLLYKHGD------VSEDIFYNLPEYLPKGALMVF 63
Query: 62 NNTKVITAQLNGVR----FCHINRREKEISCTLHMRVSPN---SWSVYARPSKVIKKGDI 114
NNTKVI A+++ + + E + N +W K K+G +
Sbjct: 64 NNTKVIQARMHFRKETGALIEVFLMEPAQPTDYELMFQTNHECAWLCMVGNLKKWKEGAL 123
Query: 115 LHFFSQDGQSRLEATVIDKWNTGE--------ILLVFSISGIELERQISLVGTIPLPPYI 166
F GQ +D+ E I + + I + VG +P+PPY+
Sbjct: 124 KRAFEIKGQKLTLTATMDRSKVQEQAGGTNHWIQFEWDNTNISFAEILEAVGELPIPPYL 183
Query: 167 ARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGT 226
R + D YQT Y+KI+GSVAAPTAGLHFT +L L G+ +TLHVGAGT
Sbjct: 184 --NRATEESDKETYQTVYSKIKGSVAAPTAGLHFTDKVLKALDEHGVDREELTLHVGAGT 241
Query: 227 FMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-------- 278
F PVK ++ + H MH+E + Q L + V+VGTTS+R LE+
Sbjct: 242 FKPVKSQEIEGHNMHTEFVVV---RRQTLEKLLKHNCHAVAVGTTSVRTLESLYYMGVKL 298
Query: 279 -----ATTEDGIINPWSGF----------------------------------------- 292
+D +N W +
Sbjct: 299 VLSPETAEKDLHVNQWEPYDLPHNEEGLVVVNGKVITAEDSIRHLLAYLDKDGLNVLHSS 358
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T I I PGY ++ V L++NFH P+STLL+LVSAF + +K+Y +A+SH +RF SYGD
Sbjct: 359 TQIIIAPGYTYKIVKALVTNFHQPQSTLLLLVSAFLK-GDWRKVYDYALSHDFRFLSYGD 417
Query: 353 TSLL 356
+SLL
Sbjct: 418 SSLL 421
>gi|308184187|ref|YP_003928320.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori SJM180]
gi|308060107|gb|ADO02003.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori SJM180]
Length = 345
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 123/359 (34%), Positives = 195/359 (54%), Gaps = 25/359 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D+ LP IA PV P++ A+L+V I+ + F N +V N
Sbjct: 6 LESYDYYLPKELIANYPVLPKEKAKLLVYERRSQT---ITHTTFEHVLDFFPKNALVVLN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKV+ A+L G + + + E+ R N+ ++ K IK GD + F
Sbjct: 63 DTKVMKARLFGSKHAFLPSKTTEV---FFHRFFKNNTALTQIKGK-IKVGDKIFF----- 113
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQ-----ISLVGTIPLPPYIARKRPIDARDY 177
+ A V++ + G+ L+ F + L ++ + G +PLPPYI KR ++ D
Sbjct: 114 DANYHAEVLELLHNGQRLIAFYDNQTPLNQENILKLLEQYGHMPLPPYI--KRADESLDA 171
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
+YQ+ +AK G+VAAPTA LHF+ + L +L+ K F+TLHVGAGTF+ V+ +D +
Sbjct: 172 HEYQSVFAKHIGAVAAPTASLHFSQHSLEKLLK-DFKHAFLTLHVGAGTFLSVETKDIRE 230
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H +H+E+ I + + L + I+ +GTT+LR +E + N + +IF+
Sbjct: 231 HQIHTEVLRIPKKSQEIL----QKSQEILCIGTTALRSVEYFKRLENP-NQEAFECDIFL 285
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
V+ L++NFHLPKS+LLMLVSA G+E+TK++Y+ AI YRFYSYGD L+
Sbjct: 286 HLANPILHVNYLLTNFHLPKSSLLMLVSAMIGLEKTKEIYKIAIEKKYRFYSYGDGMLI 344
>gi|60683103|ref|YP_213247.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides fragilis NCTC 9343]
gi|60494537|emb|CAH09336.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides fragilis NCTC 9343]
gi|301164615|emb|CBW24174.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides fragilis 638R]
Length = 407
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 131/415 (31%), Positives = 203/415 (48%), Gaps = 81/415 (19%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ E+++ LP RIA P+ RD ++L++ +S+ + + LP +L + ++FN
Sbjct: 11 ISEYNYPLPDERIAKFPLPVRDQSKLLIYRHG-----EVSEDVFTSLPEYLPAGSLMIFN 65
Query: 63 NTKVITAQLNGVR--------FCH---------INRREKEISCTLHMRVSPNSWSVYARP 105
NTKVI A+L+ + FC +N ++ E + L M + W
Sbjct: 66 NTKVIQARLHFRKETGALIEVFCLEPIQPNDYVLNFQQTEHAAWLCMVGNLKKWKDGPLC 125
Query: 106 SKVIKKGDILHFFSQDGQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPP 164
++ KG + + G+ R + ID +W+ E+ + + I + + G +P+PP
Sbjct: 126 REMTVKGFPITLTATRGECRGTSHWIDFRWDNPEV----TFADI-----LEVFGELPIPP 176
Query: 165 YIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
Y+ R + D YQT Y+KI+GSVAAPTAGLHFT +L L GI + +TLHVGA
Sbjct: 177 YLNRD--TEESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALTEKGIDLEELTLHVGA 234
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET------ 278
GTF PVK E+ + H MH+E +I + + + ++VGTTS+R LE+
Sbjct: 235 GTFKPVKSEEIEGHEMHTE--YISV-SRSIIKKLIDHDACAIAVGTTSVRTLESLYHIGV 291
Query: 279 -------ATTEDGIINPWSGF------------------------------TNIFITPGY 301
AT E + W + T I I PGY
Sbjct: 292 TLANNPEATEEQLHVKQWQPYETECDVRPVVALQKILGYLDRHGMEALHTSTQIIIAPGY 351
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
++ V +++NFH P+STLL+LVSAF +Y +A+ H +RF SYGD+SLL
Sbjct: 352 DYKIVKAMVTNFHQPQSTLLLLVSAFVK-GNWHTIYDYALGHDFRFLSYGDSSLL 405
>gi|330996657|ref|ZP_08320535.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Paraprevotella xylaniphila YIT 11841]
gi|329572729|gb|EGG54362.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Paraprevotella xylaniphila YIT 11841]
Length = 431
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 136/423 (32%), Positives = 201/423 (47%), Gaps = 79/423 (18%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +K+F+++LP RIA P+ RD ++L+V + + + LP +L +V
Sbjct: 19 IQIKDFNYNLPEERIAKFPLTERDQSKLLVYRHG-----TVGEDTFTSLPDYLPQGALMV 73
Query: 61 FNNTKVITAQLNGVR--------FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKG 112
FNNTKVI A+L+ + FC R + + + + SW K K G
Sbjct: 74 FNNTKVIQARLHFHKDTGALIEVFCLEPVRPHDYAL-MFQQTGRCSWLCLVGNLKKWKSG 132
Query: 113 DILHFFSQDGQS-RLEATVIDKWNTGE-ILLVFSISGIELERQISLVGTIPLPPYIARKR 170
+ G+S L+AT + T I + + VG +P+PPY+ R+
Sbjct: 133 SLSCPVEIGGRSITLKATRGENRGTSHWIDFEWDDEQTTWAEILEAVGELPIPPYLNRE- 191
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
D YQT Y+KI+GSVAAPTAGLHFT +L+ L + GI VTLHVGAGTF PV
Sbjct: 192 -TQESDKTTYQTVYSKIKGSVAAPTAGLHFTERVLADLDAHGIDREEVTLHVGAGTFKPV 250
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET------------ 278
K E+ H MH+E + T + L + GG ++VGTTS+R LE+
Sbjct: 251 KSEEIAGHEMHTEYICVHRSTIEKL---LAHGGACIAVGTTSVRTLESLYYIGVALNGNP 307
Query: 279 -ATTEDGIINPWSGF--------------------------------------------T 293
A+ E+ + W + T
Sbjct: 308 DASEEELHVPQWMPYEYAARTRPVGSPDNGHPEALTTLQALQNVLDYLDRHGLTALHTST 367
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
I I PGY + V ++++NFH P+STLL+LVSAF + + +Y +A++H +RF SYGD+
Sbjct: 368 QIIIAPGYEYHIVRMMVTNFHQPQSTLLLLVSAFVH-GDWRTIYDYALAHDFRFLSYGDS 426
Query: 354 SLL 356
SLL
Sbjct: 427 SLL 429
>gi|86149907|ref|ZP_01068136.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni CF93-6]
gi|88597013|ref|ZP_01100249.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni 84-25]
gi|218562228|ref|YP_002344007.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni NCTC 11168]
gi|21263926|sp|Q9PHT9|QUEA_CAMJE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|85839725|gb|EAQ56985.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni CF93-6]
gi|88190702|gb|EAQ94675.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni 84-25]
gi|112359934|emb|CAL34723.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni NCTC 11168]
gi|284925838|gb|ADC28190.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni IA3902]
gi|315927313|gb|EFV06657.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni DFVF1099]
gi|315928649|gb|EFV07936.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni 305]
Length = 342
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 134/364 (36%), Positives = 193/364 (53%), Gaps = 33/364 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
+++ +D+ L IA P P++ ARL+V N +L LP N AI
Sbjct: 5 LLLSSYDYTLANELIANYPTNPKEDARLLVFDRKNKEIFHTTFKNLQDFLP-----NCAI 59
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMR-VSPNSWSVYARPSKVIKKGDILHFF 118
FN+TKVI A++ G + +I LH ++ ++ A+ IKK +IL+F
Sbjct: 60 FFNDTKVIKARIYGNK-----ASGGKIELFLHQPFLNSHNPLFLAQIKGRIKKDEILYF- 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVF-----SISGIELERQISLVGTIPLPPYIARKRPID 173
+ L+ V++ N G + F ++ L + +G IPLPPYI KR +
Sbjct: 114 ----KEDLKVRVVELLNDGLRKVQFFQNDKTLDTSNLYNLLDKIGHIPLPPYI--KREDE 167
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D DYQ+ +AK G+VAAPTA LHF+ +L L ++Y +TLHVGAGTF V+ E
Sbjct: 168 KSDLKDYQSIFAKNLGAVAAPTASLHFSETMLENLRKKH-EIYHLTLHVGAGTFKSVECE 226
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
+ +H MHSE F + P QA + S+ I+ VGTT R +E T +GF
Sbjct: 227 NIQEHKMHSE--FFNIP-QQACEIIDSKQA-ILGVGTTVTRTIEYYTR----TKTKNGFC 278
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
++F+ P + L++NFHLPKSTL+MLVSAF G E+ K+Y+ AI YRFYSYGD
Sbjct: 279 DLFLHPQNPPIRQNHLLTNFHLPKSTLIMLVSAFIGREQCLKLYELAIKEKYRFYSYGDA 338
Query: 354 SLLF 357
L+
Sbjct: 339 MLIL 342
>gi|253566303|ref|ZP_04843757.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 3_2_5]
gi|251945407|gb|EES85845.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 3_2_5]
Length = 406
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 131/415 (31%), Positives = 203/415 (48%), Gaps = 81/415 (19%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ E+++ LP RIA P+ RD ++L++ +S+ + + LP +L + ++FN
Sbjct: 10 ISEYNYPLPDERIAKFPLPVRDQSKLLIYRHG-----EVSEDVFTSLPEYLPAGSLMIFN 64
Query: 63 NTKVITAQLNGVR--------FCH---------INRREKEISCTLHMRVSPNSWSVYARP 105
NTKVI A+L+ + FC +N ++ E + L M + W
Sbjct: 65 NTKVIQARLHFRKETGALIEVFCLEPIQPNDYVLNFQQTEHAAWLCMVGNLKKWKDGPLC 124
Query: 106 SKVIKKGDILHFFSQDGQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPP 164
++ KG + + G+ R + ID +W+ E+ + + I + + G +P+PP
Sbjct: 125 REMTVKGFPITLTATRGECRGTSHWIDFRWDNPEV----TFADI-----LEVFGELPIPP 175
Query: 165 YIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
Y+ R + D YQT Y+KI+GSVAAPTAGLHFT +L L GI + +TLHVGA
Sbjct: 176 YLNRD--TEESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALTEKGIDLEELTLHVGA 233
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET------ 278
GTF PVK E+ + H MH+E +I + + + ++VGTTS+R LE+
Sbjct: 234 GTFKPVKSEEIEGHEMHTE--YISV-SRSIIKKLIDHDACAIAVGTTSVRTLESLYHIGV 290
Query: 279 -------ATTEDGIINPWSGF------------------------------TNIFITPGY 301
AT E + W + T I I PGY
Sbjct: 291 TLANNPEATEEQLHVKQWQPYETECDVRPVVALQKILGYLDRHGMEALHTSTQIIIAPGY 350
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
++ V +++NFH P+STLL+LVSAF +Y +A+ H +RF SYGD+SLL
Sbjct: 351 DYKIVKAMVTNFHQPQSTLLLLVSAFVK-GNWHTIYDYALGHDFRFLSYGDSSLL 404
>gi|205355427|ref|ZP_03222198.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni CG8421]
gi|205346661|gb|EDZ33293.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni CG8421]
Length = 342
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 134/364 (36%), Positives = 193/364 (53%), Gaps = 33/364 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
+++ +D+ L IA P P++ ARL+V N +L LP N AI
Sbjct: 5 LLLSSYDYTLANELIANYPTNPKEDARLLVFDRKNKEIFHTTFKNLQDFLP-----NCAI 59
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMR-VSPNSWSVYARPSKVIKKGDILHFF 118
FN+TKVI A++ G + +I LH ++ ++ A+ IKK +IL+F
Sbjct: 60 FFNDTKVIKARIYGNK-----ASGGKIELFLHQPFLNSHNPLFLAQIKGRIKKDEILYF- 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVF-----SISGIELERQISLVGTIPLPPYIARKRPID 173
+ L+ V++ N G + F ++ L + +G IPLPPYI KR +
Sbjct: 114 ----KDDLKVRVVELLNDGLRKVQFFQNDKTLDTSNLYNLLDKIGHIPLPPYI--KREDE 167
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D DYQ+ +AK G+VAAPTA LHF+ +L L ++Y +TLHVGAGTF V+ E
Sbjct: 168 KSDLKDYQSIFAKNLGAVAAPTASLHFSETMLENLRKKH-EIYHLTLHVGAGTFKSVECE 226
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
+ +H MHSE F + P QA + S+ I+ VGTT R +E T +GF
Sbjct: 227 NIQEHKMHSE--FFNIP-QQACEIIDSKQA-ILGVGTTVTRTIEYYTR----TKTKNGFC 278
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
++F+ P + L++NFHLPKSTL+MLVSAF G E+ K+Y+ AI YRFYSYGD
Sbjct: 279 DLFLHPQNPPIRQNHLLTNFHLPKSTLIMLVSAFIGREQCLKLYELAIKEKYRFYSYGDA 338
Query: 354 SLLF 357
L+
Sbjct: 339 MLIL 342
>gi|206603316|gb|EDZ39796.1| Putative queuosine biosynthesis protein [Leptospirillum sp. Group
II '5-way CG']
Length = 385
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 124/360 (34%), Positives = 179/360 (49%), Gaps = 32/360 (8%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
E+D+DLP RI L P R +RL+V P + + D FL D +V N++
Sbjct: 40 EYDYDLPEDRIRLYPPPTRGESRLLVAGRESGVPYFGT---MEDFSRFLFPGDLLVLNDS 96
Query: 65 KVITAQL-----NGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
+V+ A++ G + + ++ S + S S + P K DIL+
Sbjct: 97 RVLPARVFLRAPTGRKIELLFLNPQDPSPVRFLGKGIGSSSTLSLPGGG-KVRDILYLPK 155
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
E + E LL + LE G +PLPPYI + R D
Sbjct: 156 -------EGCFQGIYEGEEGLLSW------LESH----GEMPLPPYIRKARDHHPSDRDR 198
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +++ GSVAAPTAGLHFT LL +L G++ VTLHVG GTF P+ D H+
Sbjct: 199 YQTVFSRHPGSVAAPTAGLHFTETLLEKLKDKGVETATVTLHVGIGTFRPLGPGGIDQHV 258
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED--GIINPWSGFTNIFI 297
MH+E + T+Q + + RG R+ +VGTT +R LET + W T +FI
Sbjct: 259 MHAERFLVPEETSQKIEDARRRGNRVFAVGTTVMRTLETWGQHPVRAAVPTW---TRLFI 315
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIE-ETKKMYQHAISHAYRFYSYGDTSLL 356
PG+ FR VD L++NFH P+STL++LV +F G + +Y+ A+ + F SYGD L+
Sbjct: 316 RPGFPFRVVDGLLTNFHQPRSTLVVLVDSFLGGRGRWRSLYRQALEEGFMFLSYGDAMLI 375
>gi|295086575|emb|CBK68098.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Bacteroides xylanisolvens XB1A]
Length = 406
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 130/415 (31%), Positives = 202/415 (48%), Gaps = 81/415 (19%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ E+ + LP RIA P+ RD ++L++ +S+ + + LP +L ++FN
Sbjct: 10 ISEYSYPLPDERIAKFPLPTRDQSKLLIYRRG-----EVSEDVFTSLPEYLPQGSLMIFN 64
Query: 63 NTKVITAQLNGVR--------FCH---------INRREKEISCTLHMRVSPNSWSVYARP 105
NTKVI A+L+ + FC +N ++ + L M + W
Sbjct: 65 NTKVIQARLHFRKETGALIEVFCLEPIQPNDYVLNFQQTAHAAWLCMIGNLKKWKDGQLK 124
Query: 106 SKVIKKGDILHFFSQDGQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPP 164
++ KG + + G+ + + +D W+ E+ + + I + + G +P+PP
Sbjct: 125 REMTVKGFPITLTATRGECKGTSHWVDFAWDNPEV----TFADI-----LEVFGELPIPP 175
Query: 165 YIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
Y+ R + D YQT Y+KI+GSVAAPTAGLHFT +L L GI + +TLHVGA
Sbjct: 176 YLNRD--TEESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALQKKGIDLEELTLHVGA 233
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET------ 278
GTF PVK E+ + H MH+E ++ T + L G ++VGTTS+R LE+
Sbjct: 234 GTFKPVKSEEIEGHEMHTEYISVNRSTIKKL---IDHDGCAIAVGTTSVRTLESLYHIGV 290
Query: 279 -------ATTEDGIINPWSGF------------------------------TNIFITPGY 301
AT E+ + W + T I I PGY
Sbjct: 291 TLAENPYATEEELRVKQWQPYEKYDQIPPVVALQKILGYLDRNGLETLHTSTQIIIAPGY 350
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
++ V +++NFH P+STLL+LVSAF +Y +A++H +RF SYGD+SLL
Sbjct: 351 NYKIVKAIVTNFHQPQSTLLLLVSAFVK-GNWHTIYDYALAHDFRFLSYGDSSLL 404
>gi|224438516|ref|ZP_03659436.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter cinaedi CCUG 18818]
gi|313144943|ref|ZP_07807136.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter cinaedi CCUG 18818]
gi|313129974|gb|EFR47591.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter cinaedi CCUG 18818]
Length = 373
Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 133/374 (35%), Positives = 192/374 (51%), Gaps = 33/374 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISD-HLVSDLPAFLNSNDAI 59
++ +D+ LP S IA P PR+SA+L+V + S + SD + SD F+ + +
Sbjct: 14 FLLSSYDYALPQSAIAQSPSIPRESAKLLV-YERKSDKITHSDFYHFSD---FIPKDTLL 69
Query: 60 VFNNTKVITAQLNGVRF-CHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
VFNNTKVI A++ + K + H + +S+ + +K GD L
Sbjct: 70 VFNNTKVINARIYAHKLNSQAKPNPKRMEIFFHKAL--DSFRFLVQIKGRVKSGDRLILE 127
Query: 119 SQDGQSR-LEATVIDKWNTGEILLVFSISGIELERQISLV-------------GTIPLPP 164
S +R + A V++ G ++ F S Q + + G IPLPP
Sbjct: 128 SHKAFTRPIIAQVLECCEDGMRIVEFMESTKTHSSQENRILNDKEVFELFNNHGYIPLPP 187
Query: 165 YIARKRPID--ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHV 222
YI R D V YQ+ +AK GSVAAPTA LHF+ L L + FVTLH+
Sbjct: 188 YIKRDEANQNLQEDSVFYQSVFAKELGSVAAPTASLHFSKQSLESL-QKSFQTCFVTLHI 246
Query: 223 GAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE 282
GAGTF+ V+ ED +H +H E I + +A+A+ K +++ VGTTS R +E
Sbjct: 247 GAGTFINVESEDIRNHAIHKEYFSISSSSAKAITHAK----KVLCVGTTSARCVEYMMR- 301
Query: 283 DGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAIS 342
G +IF+ PG F+ VD L++NFHLPKSTL+MLVSA G E+ ++Y A+
Sbjct: 302 ---YKVLCGECDIFLYPGVEFKRVDYLLTNFHLPKSTLIMLVSAMVGREKCLELYNIALE 358
Query: 343 HAYRFYSYGDTSLL 356
Y+FYSYGD L+
Sbjct: 359 KGYKFYSYGDGILI 372
>gi|325268978|ref|ZP_08135599.1| queuine tRNA-ribosyltransferase [Prevotella multiformis DSM 16608]
gi|324988599|gb|EGC20561.1| queuine tRNA-ribosyltransferase [Prevotella multiformis DSM 16608]
Length = 423
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 130/425 (30%), Positives = 194/425 (45%), Gaps = 80/425 (18%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + ++ + LP SRIA P+ RD ++L++ +S+ LP +L +V
Sbjct: 8 ICISDYSYPLPDSRIAKFPLAERDHSKLLLYRHG-----EVSEDTFYRLPEYLPEGALMV 62
Query: 61 FNNTKVITAQLNGVR----FCHINRREKEISCTLHMRVSPN---SWSVYARPSKVIKKGD 113
FNNTKVI A+++ + + E + N +W K K+G
Sbjct: 63 FNNTKVIQARMHFRKETGALIEVFLMEPARPTDYELMFQTNHACAWLCMVGNLKKWKEGS 122
Query: 114 ILHFFSQDGQSRLEATVIDKWNTGE--------ILLVFSISGIELERQISLVGTIPLPPY 165
+ F G +D+ E I + + + + VG +P+PPY
Sbjct: 123 LKRVFEIKGHRLTLTAAMDRSREQELAGGTHHWISFEWDNTNVSFAEILEAVGELPIPPY 182
Query: 166 IARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAG 225
+ R + D YQT Y+K++GSVAAPTAGLHFT +L L GI +TLHVGAG
Sbjct: 183 L--NRATEESDKETYQTVYSKVKGSVAAPTAGLHFTDKVLKSLDGHGIDREELTLHVGAG 240
Query: 226 TFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET------- 278
TF PVK + + H MH+E + Q L + G ++VGTTS+R LE+
Sbjct: 241 TFKPVKSREIEGHSMHTEFVVV---RRQTLEKLLKHGCCAIAVGTTSVRTLESLYYMGVK 297
Query: 279 ------ATTEDGIINPWSGF---------------------------------------- 292
A +D ++ W +
Sbjct: 298 LVSDPDAAEKDLHVDQWEPYDLPHNAEGLVEVDGRAVTVEDAVRQLLAYLDRDGLDVLHS 357
Query: 293 -TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T I I PGY ++ V IL++NFH P+STLL+LVSAF + +K+Y +A+SH +RF SYG
Sbjct: 358 STQIIIAPGYDYKIVKILVTNFHQPQSTLLLLVSAFVK-GDWRKIYDYALSHEFRFLSYG 416
Query: 352 DTSLL 356
D+SLL
Sbjct: 417 DSSLL 421
>gi|242309356|ref|ZP_04808511.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pullorum MIT 98-5489]
gi|239523927|gb|EEQ63793.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pullorum MIT 98-5489]
Length = 347
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 125/365 (34%), Positives = 188/365 (51%), Gaps = 31/365 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
++ +D++LP IA +P+ P++ A+L+V + I D FL +V
Sbjct: 4 LLSTSYDYELPKELIATQPITPKEDAKLLVYNRKDRS---IIHSTFRDFMQFLPKETLLV 60
Query: 61 FNNTKVITAQLNGVR-FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
FN+TKVI A++ GV+ F + + +I H + N + + R +K+G + F
Sbjct: 61 FNDTKVIPARIYGVKIFQNTQQEGGKIEALFHKEIGENLYLMQFRGR--LKEGSRVKF-- 116
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIE--LERQ-----ISLVGTIPLPPYIARKRPI 172
+ + A +I G F E L++Q + G PLPPYI KR
Sbjct: 117 ---EGGIFAKIIKDCGMGFKEASFFRIDDESPLDKQEFFGFLDSCGHTPLPPYI--KREA 171
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+D +Y + +AK G++AAPTA LHF+ +L FVTLHVGAGTF+ V V
Sbjct: 172 SQQDREEYNSVFAKNLGAIAAPTASLHFSQESFQQL-QREFNNAFVTLHVGAGTFLGVSV 230
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSG 291
E+ +H MH E I + Q + I ++GTT+ R +E A T+ G
Sbjct: 231 ENILEHKMHKESFIIPQESIQKIQEAT----HITAIGTTAARTIEYFARTKQA-----QG 281
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
++F+ + D L++NFHLPK+TLLMLV++F G+EETK++YQ AI YRFYSYG
Sbjct: 282 ECDLFLHLQNKPILTDALLTNFHLPKTTLLMLVASFVGLEETKRIYQEAIKKKYRFYSYG 341
Query: 352 DTSLL 356
D L+
Sbjct: 342 DGMLV 346
>gi|265766996|ref|ZP_06094825.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 2_1_16]
gi|263253373|gb|EEZ24849.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 2_1_16]
Length = 406
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 131/415 (31%), Positives = 202/415 (48%), Gaps = 81/415 (19%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ E+++ LP RIA P+ RD ++L++ +S+ + + LP +L + ++FN
Sbjct: 10 ISEYNYPLPDERIAKFPLPVRDQSKLLIYRHG-----EVSEDVFTSLPEYLPAGSLMIFN 64
Query: 63 NTKVITAQLNGVR--------FCH---------INRREKEISCTLHMRVSPNSWSVYARP 105
NTKVI A+L+ + FC +N ++ E + L M + W
Sbjct: 65 NTKVIQARLHFRKETGALIEVFCLEPIQPNDYVLNFQQMEHAAWLCMVGNLKKWKDGPLC 124
Query: 106 SKVIKKGDILHFFSQDGQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPP 164
++ KG + + G+ R + ID +W+ E+ + + I + + G +P+PP
Sbjct: 125 REMTVKGFPITLTATRGECRGTSHWIDFRWDNPEV----TFADI-----LEVFGELPIPP 175
Query: 165 YIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
Y+ R + D YQT Y+KI+GSVAAPTAGLHFT +L L GI + +TLHVGA
Sbjct: 176 YLNRD--TEESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALTEKGIDLEELTLHVGA 233
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET------ 278
GTF PVK E+ + H MH+E +I + + + +VGTTS+R LE+
Sbjct: 234 GTFKPVKSEEIEGHEMHTE--YISV-SRSIIKKLIDHDACATAVGTTSVRTLESLYHIGV 290
Query: 279 -------ATTEDGIINPWSGF------------------------------TNIFITPGY 301
AT E + W + T I I PGY
Sbjct: 291 TLANNPEATEEQLHVKQWQPYETECDVRPVVALQKILGYLDRHGMEALHTSTQIIIAPGY 350
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
++ V +++NFH P+STLL+LVSAF +Y +A+ H +RF SYGD+SLL
Sbjct: 351 DYKIVKAMVTNFHQPQSTLLLLVSAFVK-GNWHTIYDYALGHDFRFLSYGDSSLL 404
>gi|157414859|ref|YP_001482115.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni 81116]
gi|229598023|sp|A8FL01|QUEA_CAMJ8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|157385823|gb|ABV52138.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni 81116]
gi|307747496|gb|ADN90766.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni M1]
Length = 342
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 133/364 (36%), Positives = 192/364 (52%), Gaps = 33/364 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
+++ +D+ L IA P P++ ARL+V N +L LP N AI
Sbjct: 5 LLLSSYDYTLANELIANYPTNPKEDARLLVFDRKNKEIFHTTFKNLQDFLP-----NCAI 59
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMR-VSPNSWSVYARPSKVIKKGDILHFF 118
FN+TKVI A++ G + +I LH ++ ++ A+ +KK +IL+F
Sbjct: 60 FFNDTKVIKARIYGNKVS-----GGKIELFLHQPFLNSHNPLFLAQIKGRVKKDEILYF- 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVF-----SISGIELERQISLVGTIPLPPYIARKRPID 173
+ L+ V++ N G + F ++ L + +G IPLPPYI KR +
Sbjct: 114 ----KKDLKIRVVELLNDGLRKVQFFQNDKTLDTSNLYNLLDKIGHIPLPPYI--KREDE 167
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D DYQ+ +AK G+VAAPTA LHF+ +L L ++Y +TLHVGAGTF V+ E
Sbjct: 168 KSDLKDYQSIFAKNLGAVAAPTASLHFSETMLENLRKKH-EIYHLTLHVGAGTFKSVECE 226
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
+ +H MHSE F + P QA + S+ I+ VGTT R +E SGF
Sbjct: 227 NIQEHKMHSE--FFNIP-QQACEIIDSKQA-ILGVGTTVTRTIEYYAR----TKTKSGFC 278
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
++F+ P + L++NFHLPKSTL+MLVSAF G E+ K+Y+ AI YRFYSYGD
Sbjct: 279 DLFLHPQNPPIRQNHLLTNFHLPKSTLIMLVSAFIGREQCLKLYELAIKEKYRFYSYGDA 338
Query: 354 SLLF 357
L+
Sbjct: 339 MLIL 342
>gi|313674814|ref|YP_004052810.1| s-adenosylmethionine/tRNA-ribosyltransferase isomerase [Marivirga
tractuosa DSM 4126]
gi|312941512|gb|ADR20702.1| S-adenosylmethionine/tRNA-ribosyltransferase isomerase [Marivirga
tractuosa DSM 4126]
Length = 406
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 134/410 (32%), Positives = 198/410 (48%), Gaps = 71/410 (17%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++ ++LP RIA P+ RD ++L+V I D+ + L N +++FN
Sbjct: 12 LNKYQYELPEERIAKFPLEKRDHSQLLVYQKG-----NIQHQHFYDIKSHLPENSSLIFN 66
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS-----------WSVYARPSKVIKK 111
NTKVI A+ + F + + EI + +P W K K
Sbjct: 67 NTKVIPAR---IHFQKQSGAKIEIFLLSPLEPTPEVAQAMLAKKKCIWHCMVGNRKRWKI 123
Query: 112 GDILH--FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARK 169
D L F ++ G+ ++ AT D + I + + + L+GT PLPPY+
Sbjct: 124 QDQLERFFETEYGKIQVTATYAD-YEQNHIQFEWDNDAVPFVEIVELMGTTPLPPYL--N 180
Query: 170 RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
R D YQT Y+K +G+VAAPTAGLHFT +L + I ++ +TLHVGAGTF P
Sbjct: 181 RTATDEDKPRYQTVYSKNEGAVAAPTAGLHFTDTIL-KDIQKSHSIHELTLHVGAGTFQP 239
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA---------- 279
+K E+ +H MH E ID T + L ++ I +VGTTS+R LE+A
Sbjct: 240 IKAENVLEHDMHCEQIQIDKSTIEFLAQSEN---PITAVGTTSIRSLESAYWFGVQLINK 296
Query: 280 -----------TTEDGI---------------------INPWSGFTNIFITPGYRFRAVD 307
E G + G T IFI PGY F+ V+
Sbjct: 297 EARTFHITKLYPYEKGFDELPRRKESFQAILNYMKAENVESLHGDTEIFIFPGYEFQVVN 356
Query: 308 ILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
L++NFH P+STL++L++AF G E+ +K+Y A+ + YRF SYGD+SLL
Sbjct: 357 GLITNFHQPESTLILLIAAFIG-EKWQKVYDEALKNDYRFLSYGDSSLLL 405
>gi|288802174|ref|ZP_06407614.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella melaninogenica D18]
gi|288335141|gb|EFC73576.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella melaninogenica D18]
Length = 423
Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 129/423 (30%), Positives = 194/423 (45%), Gaps = 80/423 (18%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++++ LP RIA P+ RD ++L++ +S+ + +LP +L ++FN
Sbjct: 10 ISDYNYPLPDERIAKFPLTERDHSKLLLYKHG-----EVSEDIFYNLPEYLPKGALMIFN 64
Query: 63 NTKVITAQLNGVR----FCHINRREKEISCTLHMRVSPN---SWSVYARPSKVIKKGDIL 115
NTKVI A+++ + + E + N +W K K+G +
Sbjct: 65 NTKVIQARMHFRKETGALIEVFLMEPAQPTDYELMFQTNHECAWLCMVGNLKKWKEGALK 124
Query: 116 HFFSQDGQSRLEATVIDKWNTGE--------ILLVFSISGIELERQISLVGTIPLPPYIA 167
F G +D+ E I + + I + VG +P+PPY+
Sbjct: 125 RAFEIKGHKLTLTATMDRSKVQEQAGGTNHWIQFEWDNTNISFAEILEAVGELPIPPYL- 183
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R + D YQT Y+KI+GSVAAPTAGLHFT +L L G+ +TLHVGAGTF
Sbjct: 184 -NRATEESDKETYQTVYSKIKGSVAAPTAGLHFTDKVLKALDEHGVDREELTLHVGAGTF 242
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK ++ + H MH+E + T + L K V+VGTTS+R LE+
Sbjct: 243 KPVKSQEIEGHNMHTEFVVVRRQTLEKLLKHKCHA---VAVGTTSVRTLESLYYMGVKLV 299
Query: 279 ----ATTEDGIINPWSGF-----------------------------------------T 293
+D +N W + T
Sbjct: 300 LSPETAEKDLHVNQWEPYDLPHNEEGLVVVNGKVITAEESIRHLLAYLDKDGLNVLHSST 359
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
I I PGY ++ V L++NFH P+STLL+LVSAF + +K+Y +A+SH +RF SYGD+
Sbjct: 360 QIIIAPGYTYKIVKALVTNFHQPQSTLLLLVSAFLK-GDWRKVYDYALSHDFRFLSYGDS 418
Query: 354 SLL 356
SLL
Sbjct: 419 SLL 421
>gi|208434332|ref|YP_002265998.1| S-adenosyl methionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori G27]
gi|226713842|sp|B5ZAF2|QUEA_HELPG RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|208432261|gb|ACI27132.1| S-adenosyl methionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori G27]
Length = 345
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 124/359 (34%), Positives = 195/359 (54%), Gaps = 25/359 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D+ LP IA PV P++ A+L+V I+ + F N IV N
Sbjct: 6 LESYDYYLPKELIANYPVLPKEKAKLLVYERRSQT---ITHTTFEHVLDFFPKNALIVLN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKV+ A+L G + + + E+ H N+ + IK GD + FF ++
Sbjct: 63 DTKVMKARLFGSKHAFLPSKTTEV--FFHRFFKDNTALTQIKGK--IKVGDKI-FFDEN- 116
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQ-----ISLVGTIPLPPYIARKRPIDARDY 177
A V++ + G+ L+ F + L ++ + G +PLPPYI KR ++ D
Sbjct: 117 ---YYAEVLELLHNGQRLIAFYDNQTPLNQENILKLLEQYGHMPLPPYI--KRADESLDA 171
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
+YQ+ +AK G+VAAPTA LHF+ + L +L+ K F+TLHVGAGTF+ V+ +D +
Sbjct: 172 HEYQSVFAKHTGAVAAPTASLHFSQHGLEKLLK-DFKHAFLTLHVGAGTFLGVETKDIRE 230
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H +H+E+ I + + L + I+ +GTT+LR +E + N + +IF+
Sbjct: 231 HQIHTEVLRIPKKSQEIL----QKSQEILCIGTTALRSVEYFKRLENP-NQEAFECDIFL 285
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
V+ L++NFHLPKS+LLMLVSA G+E+TK++Y+ AI YRFYSYGD L+
Sbjct: 286 HLANPILHVNYLLTNFHLPKSSLLMLVSAMIGLEKTKEIYKIAIEKKYRFYSYGDGMLI 344
>gi|53715168|ref|YP_101160.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
fragilis YCH46]
gi|52218033|dbj|BAD50626.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
fragilis YCH46]
Length = 406
Score = 179 bits (454), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 131/415 (31%), Positives = 202/415 (48%), Gaps = 81/415 (19%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ E+++ LP RIA P+ RD ++L++ + S+ + + LP +L + ++FN
Sbjct: 10 ISEYNYPLPDERIAKFPLPVRDQSKLLIYRHGEA-----SEDVFTSLPEYLPAGSLMIFN 64
Query: 63 NTKVITAQLNGVR--------FCH---------INRREKEISCTLHMRVSPNSWSVYARP 105
NTKVI A+L+ + FC +N ++ E + L M + W
Sbjct: 65 NTKVIQARLHFRKETGALIEVFCLEPIQPNDYVLNFQQTEHAAWLCMVGNLKKWKDGPLC 124
Query: 106 SKVIKKGDILHFFSQDGQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPP 164
++ KG + + G+ R + ID +W+ E+ + + I + + G +P+PP
Sbjct: 125 REMTVKGFPITLTATRGECRGTSHWIDFRWDNPEV----TFADI-----LEVFGELPIPP 175
Query: 165 YIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
Y+ R + D YQT Y+KI+GSVAAPTAGLHFT +L L GI + +TLHVGA
Sbjct: 176 YLNRD--TEESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALTEKGIDLEELTLHVGA 233
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET------ 278
GTF PVK E+ + H MH+E +I + + + +VGTTS+R LE+
Sbjct: 234 GTFKPVKSEEIEGHEMHTE--YISV-SRSIIKKLIDHDACATAVGTTSVRTLESLYHIGV 290
Query: 279 -------ATTEDGIINPWSGF------------------------------TNIFITPGY 301
AT E + W + T I I PGY
Sbjct: 291 TLANNPEATEEQLHVKQWQPYETECDVRPVVALQKILGYLDRHGMEALHTSTQIIIAPGY 350
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
++ V +++NFH P+STLL+LVSAF +Y +A+ H +RF SYGD+SLL
Sbjct: 351 DYKIVKAMVTNFHQPQSTLLLLVSAFVK-GNWHTIYDYALGHDFRFLSYGDSSLL 404
>gi|114778172|ref|ZP_01453059.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Mariprofundus ferrooxydans PV-1]
gi|114551590|gb|EAU54144.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Mariprofundus ferrooxydans PV-1]
Length = 342
Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 114/303 (37%), Positives = 166/303 (54%), Gaps = 18/303 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V ++DFDLP IA +P+ RD++RL+ + ++D + DLP + D V
Sbjct: 1 MRVSDYDFDLPEKSIASQPLRQRDASRLLTLSGEDG---QLTDRWIRDLPQLVEPGDVWV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G + + K L + W + + +K +K G ++ F
Sbjct: 58 VNDTRVIPARLIGQK----SSGGKVEVLLLEPSDKTDVWRAWGKSNKPLKAGTVITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A V+ + G+ +LV ++ ++ I G +PLPPYI RP D Y
Sbjct: 111 --TNTFSALVLSR--DGKDILVHLLAD-DVPAAIEAHGHMPLPPYI--NRPDSEEDKQRY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLH T+ L++ + G VTLHVG GTF PV+VE+ D+H+M
Sbjct: 164 QTVFARHAGAVAAPTAGLHLTTELMAAMEEAGAVFAHVTLHVGPGTFQPVQVENLDEHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + TA +N +S+G RIV+VGTTSLR LE A G + S T+IFITPG
Sbjct: 224 HEEGYIVPEETATLVNMARSQGRRIVAVGTTSLRTLEAAGAS-GELLAGSDRTSIFITPG 282
Query: 301 YRF 303
Y F
Sbjct: 283 YHF 285
>gi|327313510|ref|YP_004328947.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella denticola F0289]
gi|326944593|gb|AEA20478.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella denticola F0289]
Length = 436
Score = 179 bits (453), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 128/425 (30%), Positives = 193/425 (45%), Gaps = 80/425 (18%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + ++++ LP +RIA P+ RD ++L++ +S+ LP +L +V
Sbjct: 21 ICISDYNYPLPDARIAKFPLSERDHSKLLLYKHG-----EVSEDKFYQLPEYLPKGALMV 75
Query: 61 FNNTKVITAQLNGVR----FCHINRREKEISCTLHMRVSPN---SWSVYARPSKVIKKGD 113
FNNTKVI A+++ + + E + N +W K K+G
Sbjct: 76 FNNTKVIQARMHFRKETGALIEVFLMEPAQPTDYELMFQTNHACAWLCMVGNLKKWKEGA 135
Query: 114 ILHFFSQDGQSRLEATVIDKWNTGE--------ILLVFSISGIELERQISLVGTIPLPPY 165
+ F G +D+ E + + + + + VG +P+PPY
Sbjct: 136 LRRTFEIKGHKLTLTATMDRSKVQEQAGGTNHWVNFEWDNTNVSFAEILEAVGELPIPPY 195
Query: 166 IARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAG 225
+ R + D YQT Y+KI+GSVAAPTAGLHFT +L L GI +TLHVGAG
Sbjct: 196 L--NRATEESDKETYQTVYSKIKGSVAAPTAGLHFTDKVLEALDEHGIDREELTLHVGAG 253
Query: 226 TFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET------- 278
TF PVK + + H MH+E + Q L + G R ++VGTTS+R LE+
Sbjct: 254 TFKPVKSHEIEGHSMHTEFIVV---RRQTLEKLLKHGCRAIAVGTTSVRTLESLYYMGVK 310
Query: 279 ------ATTEDGIINPWSGF---------------------------------------- 292
+D +N W +
Sbjct: 311 LVSDPETAEKDLHVNQWEPYDLPHNAEGLVETDGKVITVEDAVRHLLAYLDRDGLNALHS 370
Query: 293 -TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T I I PGY ++ V L++NFH P+STLL+LVSAF + +K+Y +A+ H +RF SYG
Sbjct: 371 STQIIIAPGYTYKLVKALVTNFHQPQSTLLLLVSAFVK-GDWRKIYDYALGHDFRFLSYG 429
Query: 352 DTSLL 356
D+SLL
Sbjct: 430 DSSLL 434
>gi|325860315|ref|ZP_08173437.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella denticola CRIS 18C-A]
gi|325482194|gb|EGC85205.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella denticola CRIS 18C-A]
Length = 423
Score = 179 bits (453), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 128/425 (30%), Positives = 193/425 (45%), Gaps = 80/425 (18%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + ++++ LP +RIA P+ RD ++L++ +S+ LP +L +V
Sbjct: 8 ICISDYNYPLPDARIAKFPLSERDHSKLLLYKHG-----EVSEDKFYQLPEYLPKGALMV 62
Query: 61 FNNTKVITAQLNGVR----FCHINRREKEISCTLHMRVSPN---SWSVYARPSKVIKKGD 113
FNNTKVI A+++ + + E + N +W K K+G
Sbjct: 63 FNNTKVIQARMHFRKETGALIEVFLMEPAQPTDYELMFQTNHACAWLCMVGNLKKWKEGA 122
Query: 114 ILHFFSQDGQSRLEATVIDKWNTGE--------ILLVFSISGIELERQISLVGTIPLPPY 165
+ F G +D+ E + + + + + VG +P+PPY
Sbjct: 123 LRRAFEIKGHKLTLTATMDRSKVQEQAGGTNHWVNFEWDNTNVSFAEILEAVGELPIPPY 182
Query: 166 IARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAG 225
+ R + D YQT Y+KI+GSVAAPTAGLHFT +L L GI +TLHVGAG
Sbjct: 183 L--NRATEESDKETYQTVYSKIKGSVAAPTAGLHFTDKVLEALDEHGIDREELTLHVGAG 240
Query: 226 TFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET------- 278
TF PVK + + H MH+E + Q L + G R ++VGTTS+R LE+
Sbjct: 241 TFKPVKSHEIEGHSMHTEFIVV---RRQTLEKLLKHGCRAIAVGTTSVRTLESLYYMGVK 297
Query: 279 ------ATTEDGIINPWSGF---------------------------------------- 292
+D +N W +
Sbjct: 298 LVSDPETAEKDLHVNQWEPYDLPHNAEGLVETDGKVITVEDAVRHLLAYLDRDGLNALHS 357
Query: 293 -TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T I I PGY ++ V L++NFH P+STLL+LVSAF + +K+Y +A+ H +RF SYG
Sbjct: 358 STQIIIAPGYTYKIVKALVTNFHQPQSTLLLLVSAFVK-GDWRKIYDYALGHNFRFLSYG 416
Query: 352 DTSLL 356
D+SLL
Sbjct: 417 DSSLL 421
>gi|255037056|ref|YP_003087677.1| Queuosine biosynthesis protein [Dyadobacter fermentans DSM 18053]
gi|254949812|gb|ACT94512.1| Queuosine biosynthesis protein [Dyadobacter fermentans DSM 18053]
Length = 410
Score = 179 bits (453), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 143/407 (35%), Positives = 196/407 (48%), Gaps = 65/407 (15%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ + +DLP RIA P+ RD ++LMV L +D + S+LP +VFN
Sbjct: 11 LQSYTYDLPDDRIAKYPMEVRDQSKLMVYRGGELGHLRFTD-ISSELP----EKTLLVFN 65
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--------WSVYARPSKVIKKGDI 114
+TKVI A+ + + + L RV ++ W K K GD
Sbjct: 66 DTKVIPARAHFKKETGAIIELLLLHPELPTRVINDAMLVTHACVWECMIGNKKRWKAGDS 125
Query: 115 LHFFSQ-DG-QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
L Q +G + L+ + D + + L + +G+ + +G IPLPPY+ R
Sbjct: 126 LSNVIQVNGFEVHLQVSYHD-YERNLVRLTWD-AGVTFLDLVKALGEIPLPPYL--NRDT 181
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+ D YQT YA G+VAAPTAGLHFT + L GI F+TLHVGAGTF P+KV
Sbjct: 182 EEPDKETYQTVYANHDGAVAAPTAGLHFTPRVFDELEKKGIGKAFLTLHVGAGTFQPIKV 241
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET----------ATTE 282
E +H MHSE T + +N + IV VGTTSLR LE+ T
Sbjct: 242 EKVTEHRMHSEQVVF---TRELINDLVQSVDHIVPVGTTSLRSLESLYWYGVKLFAGETT 298
Query: 283 DGIIN-----PWS---------------------------GFTNIFITPGYRFRAVDILM 310
D I PW G T IFI PGYRFR ++
Sbjct: 299 DFHIEKLYPYPWRETELPTAAQSLQAIADHMDAGGLHEIVGETEIFIFPGYRFRLCRGII 358
Query: 311 SNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+N+H P STL++LV+AF G + KK+Y A+S+ YRF SYGD+SLL+
Sbjct: 359 TNYHQPGSTLILLVAAFVG-NDWKKIYSEALSNDYRFLSYGDSSLLW 404
>gi|299140490|ref|ZP_07033628.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
oris C735]
gi|298577456|gb|EFI49324.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
oris C735]
Length = 416
Score = 179 bits (453), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 135/429 (31%), Positives = 209/429 (48%), Gaps = 97/429 (22%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ E+D+ LP RIA P+ RD ++L++ +SD + +LP +L + +V+N
Sbjct: 8 ISEYDYVLPDERIAKFPLPQRDHSKLLIYEHG-----KVSDDVFFNLPKYLPQHALMVYN 62
Query: 63 NTKVITAQLNGVRFCHINRREKE--ISCTLHMRVSPN------------SWSVYARPSKV 108
NT+VI A+++ R+E I L +P SW K
Sbjct: 63 NTRVIQARMHF-------RKETGALIEVFLMEPAAPTDYELMFQTKGQCSWLCMIGNLKK 115
Query: 109 IKKGDILHFFSQDGQ------------SRLEATVIDKWNTGEILLVFSISGIELERQISL 156
K+G + F G+ S AT + W + + + I + +
Sbjct: 116 WKEGSLKRDFDIKGEHLTLSVLLNYEKSAHGATGTNYW----VDFSWDNANINFAEILEV 171
Query: 157 VGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVY 216
VG +P+PPY+ R+ + D + YQT Y+KI+GSVAAPTAGLHFT ++L + + GI+
Sbjct: 172 VGELPIPPYLNRE--TEESDKLTYQTVYSKIKGSVAAPTAGLHFTDDVLRAIEARGIERE 229
Query: 217 FVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLL 276
VTLHVGAGTF PVK ++ H MH+E +I +N +K + ++VGTTS+R L
Sbjct: 230 EVTLHVGAGTFKPVKSKEIYGHEMHTE--YIVVHRHTLVNLIKYE-CKAIAVGTTSVRTL 286
Query: 277 ET-------------ATTEDGIINPWSGF------------------------------- 292
E+ AT E+ ++ W +
Sbjct: 287 ESLYYMGVKLENNPDATEEELHVSQWEPYEREREGGLINGITPVHAIQNLIDWLDKAGVE 346
Query: 293 -----TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
T I I PGY ++ V +L++NFH P+STLL+LVSAF + +K+Y +A+++ +RF
Sbjct: 347 VLHSSTQILIAPGYEYKIVKMLVTNFHQPQSTLLLLVSAFVK-GDWRKIYDYALANNFRF 405
Query: 348 YSYGDTSLL 356
SYGD+SLL
Sbjct: 406 LSYGDSSLL 414
>gi|210134580|ref|YP_002301019.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori P12]
gi|226713841|sp|B6JKW1|QUEA_HELP2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|210132548|gb|ACJ07539.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori P12]
Length = 345
Score = 178 bits (452), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 123/359 (34%), Positives = 195/359 (54%), Gaps = 25/359 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D+ LP IA PV P++ A+L+V I+ + F N +V N
Sbjct: 6 LESYDYYLPKELIANYPVLPKEKAKLLVYDRRSQ---TITHTTFEHVLDFFPKNALVVLN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKV+ A+L G + + + E+ H N+ + IK GD + FF ++
Sbjct: 63 DTKVMKARLFGSKHAFLPSKTTEV--FFHRFFKDNTALTQIKGK--IKAGDKI-FFDEN- 116
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQ-----ISLVGTIPLPPYIARKRPIDARDY 177
A V++ + G+ L+ F + L ++ + G +PLPPYI KR ++ D
Sbjct: 117 ---YCAEVLELLHNGQRLIAFYDNQTPLNQENILKLLEQYGHMPLPPYI--KRADESLDA 171
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
+YQ+ +AK G+VAAPTA LHF+ + L +L+ K F+TLHVGAGTF+ V+ +D +
Sbjct: 172 HEYQSVFAKHIGAVAAPTASLHFSQHTLEKLLK-DFKHAFLTLHVGAGTFLGVETKDIRE 230
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H +H+E+ I + + L + I+ +GTT+LR +E + N + +IF+
Sbjct: 231 HQIHTEVLRIPKKSQEIL----QKSQEILCIGTTALRSVEYFKRLENP-NQEAFECDIFL 285
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
V+ L++NFHLPKS+LLMLVSA G+E+TK++Y+ AI YRFYSYGD L+
Sbjct: 286 HLANPILHVNYLLTNFHLPKSSLLMLVSAMIGLEKTKEIYKIAIEKKYRFYSYGDGMLI 344
>gi|254779075|ref|YP_003057180.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori B38]
gi|254000986|emb|CAX28930.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein queA) [Helicobacter pylori B38]
Length = 345
Score = 178 bits (452), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 124/359 (34%), Positives = 191/359 (53%), Gaps = 25/359 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D+ LP IA PV P++ A+L+V I+ + F N IV N
Sbjct: 6 LESYDYYLPKELIANYPVLPKEKAKLLVYERRSQT---ITHTTFEHVLDFFPKNALIVLN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKVI A+L G + + + E+ H N+ + IK GD + F
Sbjct: 63 DTKVIKARLFGSKHAFLPSKMTEV--FFHRFFKDNTALTQIKGK--IKVGDKIFF----- 113
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQ-----ISLVGTIPLPPYIARKRPIDARDY 177
+ A V++ + G+ L+ F L ++ + G +PLPPYI KR ++ D
Sbjct: 114 DANYYAEVLELLHNGQRLIAFYDHKTPLNQENILKLLEQYGHMPLPPYI--KRADESLDA 171
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
+YQ+ +AK G+VAAPTA LHF+ + L +L+ K F+TLHVGAGTF+ V+ +D +
Sbjct: 172 HEYQSVFAKHIGAVAAPTASLHFSQHGLEKLLK-DFKHAFLTLHVGAGTFLGVETKDIRE 230
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H +H+E+ I + + L + I+ +GTT+LR +E N S +IF+
Sbjct: 231 HQIHTEVLHIPKKSQEILQESQE----ILCIGTTALRSVEYFKRLKNP-NQESFECDIFL 285
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ + L++NFHLPKS+LLMLVSA G+E+TK++Y+ AI YRFYSYGD L+
Sbjct: 286 HLANPIQHANYLLTNFHLPKSSLLMLVSAMIGLEKTKEIYKIAIEKKYRFYSYGDGMLI 344
>gi|299148283|ref|ZP_07041345.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides sp. 3_1_23]
gi|298513044|gb|EFI36931.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides sp. 3_1_23]
Length = 406
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 129/415 (31%), Positives = 202/415 (48%), Gaps = 81/415 (19%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ E+ + L RIA P+ RD ++L++ +S+ + + LP +L ++FN
Sbjct: 10 ISEYSYPLLDERIAKFPLPTRDQSKLLIYRRG-----EVSEDVFTSLPEYLPQGSLMIFN 64
Query: 63 NTKVITAQLNGVR--------FCH---------INRREKEISCTLHMRVSPNSWSVYARP 105
NTKVI A+L+ + FC +N ++ + L M + W
Sbjct: 65 NTKVIQARLHFRKETGALIEVFCLEPIQPNDYVLNFQQTAHAAWLCMIGNLKKWKDGQLK 124
Query: 106 SKVIKKGDILHFFSQDGQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPP 164
++ KG + + G+ + + +D W+ E+ + + I + + G +P+PP
Sbjct: 125 REMTVKGFPITLTATRGECKGTSHWVDFAWDNPEV----TFADI-----LEVFGELPIPP 175
Query: 165 YIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
Y+ R + D YQT Y+KI+GSVAAPTAGLHFT +L L GI + +TLHVGA
Sbjct: 176 YLNRD--TEESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALQEKGIDLEELTLHVGA 233
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET------ 278
GTF PVK E+ + H MH+E ++ T + L G ++VGTTS+R LE+
Sbjct: 234 GTFKPVKSEEIEGHEMHTEYISVNRSTIKKL---IDHDGCAIAVGTTSVRTLESLYHIGV 290
Query: 279 -------ATTEDGIINPWSGF------------------------------TNIFITPGY 301
AT E+ + W + T I I PGY
Sbjct: 291 TLAENPYATEEELRVKQWQPYEKYDQIPPVVALQKILGYLDRNGLETLHTSTQIIIAPGY 350
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
++ V +++NFH P+STLL+LVSAF + +Y +A++H +RF SYGD+SLL
Sbjct: 351 NYKIVKAMVTNFHQPQSTLLLLVSAFVK-GNWRTIYDYALAHDFRFLSYGDSSLL 404
>gi|284036021|ref|YP_003385951.1| Queuosine biosynthesis protein [Spirosoma linguale DSM 74]
gi|283815314|gb|ADB37152.1| Queuosine biosynthesis protein [Spirosoma linguale DSM 74]
Length = 409
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 133/419 (31%), Positives = 205/419 (48%), Gaps = 81/419 (19%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+++ EF +DLP RIA P+ RD+++L++ V+S + +DLP+ L N +V
Sbjct: 7 LLLSEFQYDLPDDRIARFPLPQRDASKLLLYKGG-----VVSHNRFTDLPSLLLPNSFLV 61
Query: 61 FNNTKVITAQLNGVRFCH------------INRREKEISCTLHMRVSPNS-WSVYARPSK 107
FN+TKVI A+L+ + I + +L M + + W K
Sbjct: 62 FNDTKVIPARLHFTKPTGALIELFLLNPFPIEPGGEPAPISLAMEETGTAIWQGMIGNRK 121
Query: 108 VIKKGDIL--HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPY 165
K+ + L F + +G+ L A+ D ++ + L + + + + + +G IPLPPY
Sbjct: 122 RWKQDEPLVTTFPTPEGEVILTASWHD-YDQSAVRLSWQPAELTFAQLVQYIGEIPLPPY 180
Query: 166 IARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAG 225
+ KR A D YQT Y+K +G+VAAPTAGLHFT+ + L + I ++TLHVGAG
Sbjct: 181 L--KREATATDRETYQTVYSKQEGAVAAPTAGLHFTAAVFEALANNNINHDYLTLHVGAG 238
Query: 226 TFMPVKVEDTDDHIMHSE-IGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE------- 277
TF P+K +D H MH+E + + A L + + +V+VGTTS+R LE
Sbjct: 239 TFQPIKTDDVRQHHMHTEQVVYTQANVRNLLAHLDT----VVAVGTTSMRALESLYWIGT 294
Query: 278 ----------------------------------------TATTEDGIINPWSGFTNIFI 297
TA E + + T I+I
Sbjct: 295 KLVRKEPNPFQLDQQYAYQLPDDQQPSVADALNAVLDYLVTANKESVVAH-----TGIYI 349
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
TPGYR R L++NFH P STL++L++ G + K +Y+ A+ + YRF SYGD+SLL
Sbjct: 350 TPGYRIRLCKGLVTNFHQPGSTLILLIATLIG-DSWKNVYKEALENDYRFLSYGDSSLL 407
>gi|57238227|ref|YP_178692.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni RM1221]
gi|81557544|sp|Q5HVJ3|QUEA_CAMJR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|57167031|gb|AAW35810.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni RM1221]
gi|315057991|gb|ADT72320.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni S3]
Length = 342
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 132/364 (36%), Positives = 191/364 (52%), Gaps = 33/364 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
+++ +D+ L IA P P++ ARL+V N +L LP N AI
Sbjct: 5 LLLSSYDYTLANELIANYPTNPKEDARLLVFDRKNKEIFHTTFKNLQDFLP-----NCAI 59
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVY-ARPSKVIKKGDILHFF 118
FN+TKVI A++ G + +I LH + ++ A+ +KK +IL+F
Sbjct: 60 FFNDTKVIKARIYGNK-----ASGGKIELFLHQPFLNSHDPLFLAQIKGRVKKDEILYF- 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVF-----SISGIELERQISLVGTIPLPPYIARKRPID 173
+ L+ V++ N G + F ++ L + +G IPLPPYI KR +
Sbjct: 114 ----KDDLKVRVVELLNDGLRKVQFFQNDKTLDTSNLYNLLDKIGHIPLPPYI--KREDE 167
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D DYQ+ +AK G+VAAPTA LHF+ +L L ++Y +TLHVGAGTF V+ E
Sbjct: 168 KSDLKDYQSIFAKNLGAVAAPTASLHFSETMLENLRKKH-EIYHLTLHVGAGTFKSVECE 226
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
+ +H MHSE F + P QA + S+ I+ VGTT R +E +GF
Sbjct: 227 NIQEHKMHSE--FFNIP-QQACEIIDSKQA-ILGVGTTVTRTIEYYAR----TKTKNGFC 278
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
++F+ P + L++NFHLPKSTL+MLVSAF G E+ K+Y+ AI YRFYSYGD
Sbjct: 279 DLFLHPQNPPIRQNHLLTNFHLPKSTLIMLVSAFIGREQCLKLYELAIKEKYRFYSYGDA 338
Query: 354 SLLF 357
L+
Sbjct: 339 MLIL 342
>gi|86151533|ref|ZP_01069747.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni 260.94]
gi|86153214|ref|ZP_01071418.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni HB93-13]
gi|121612914|ref|YP_001000278.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni 81-176]
gi|167005231|ref|ZP_02270989.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni 81-176]
gi|315124097|ref|YP_004066101.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni ICDCCJ07001]
gi|229598024|sp|A1VYT7|QUEA_CAMJJ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|85841162|gb|EAQ58410.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni 260.94]
gi|85842940|gb|EAQ60151.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni HB93-13]
gi|87250015|gb|EAQ72973.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni 81-176]
gi|315017819|gb|ADT65912.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni ICDCCJ07001]
Length = 342
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 132/362 (36%), Positives = 191/362 (52%), Gaps = 31/362 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+++ +D+ L IA P P++ ARL+V I +L FL + AI
Sbjct: 5 LLLSSYDYTLANELIANYPANPKEDARLLVFDRKNK---EIFHTTFKNLKDFL-PDCAIF 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVY-ARPSKVIKKGDILHFFS 119
FN+TKVI A++ G + +I LH + ++ A+ +KK +IL+F
Sbjct: 61 FNDTKVIKARIYGNK-----ASGGKIELFLHQPFLNSHNPLFLAQIKGRVKKDEILYF-- 113
Query: 120 QDGQSRLEATVIDKWNTGEILLVF-----SISGIELERQISLVGTIPLPPYIARKRPIDA 174
+ L+A V++ + G + F ++ L + +G IPLPPYI KR +
Sbjct: 114 ---KEDLKARVVELLDDGLRKVQFFQNDKTLDTSNLYNLLDKIGHIPLPPYI--KREDEK 168
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D DYQ+ +AK G+VAAPTA LHF+ + L K+Y +TLHVGAGTF V+ E+
Sbjct: 169 SDLKDYQSIFAKNLGAVAAPTASLHFSETMFENLRKKH-KIYHLTLHVGAGTFKGVECEN 227
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
+H MHSE F + P QA + S+ I+ VGTT R +E SGF +
Sbjct: 228 IQEHKMHSE--FFNIPQ-QACEIIDSKQA-ILGVGTTVTRTIEYYAR----TKTKSGFCD 279
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
+F+ P + L++NFHLPKSTL+MLVSAF G E+ K+Y+ AI YRFYSYGD
Sbjct: 280 LFLHPQNPPIRQNHLLTNFHLPKSTLIMLVSAFIGREQCLKLYKLAIKEKYRFYSYGDAM 339
Query: 355 LL 356
L+
Sbjct: 340 LI 341
>gi|313887406|ref|ZP_07821096.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas asaccharolytica PR426713P-I]
gi|312923174|gb|EFR33993.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas asaccharolytica PR426713P-I]
gi|332177882|gb|AEE13572.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Porphyromonas asaccharolytica DSM 20707]
Length = 357
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/353 (32%), Positives = 174/353 (49%), Gaps = 9/353 (2%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
FD+ LP IA P RD +R+MV+H I D+ + D VFN+TK
Sbjct: 10 FDYKLPEELIAQYPTTFRDQSRMMVLHRTDGS---IEHKNFVDIIDYFGEKDTFVFNDTK 66
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSR 125
V A+L G++ N+ + E+ + S W V P++ I+ G+ L F + G
Sbjct: 67 VFPARLYGLK--EKNQAKIEVFLLRELNESLRLWDVLVDPARKIRIGNKLEFGEEGGAPV 124
Query: 126 LEATVIDKW-NTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTT 183
L A VID + G IL ++ S + + + +G PLP I KRP + D YQ+
Sbjct: 125 LVAEVIDNTISRGRILRFLYDGSHEDFLKDLYSLGEAPLPEEI--KRPAEPSDLERYQSV 182
Query: 184 YAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSE 243
+AK G+V AP A LHF+ +L +L G + F+TLH ++ ++VE + + +E
Sbjct: 183 FAKHIGAVCAPAASLHFSDIILHKLRLQGCNLAFLTLHHNLSSYQEIEVEAISKYKVENE 242
Query: 244 IGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRF 303
+I A +N + +IV+VG T +R LET + DG + +SG+TN FI P Y
Sbjct: 243 EMYISAECCDIVNQARDDKAQIVAVGATVMRALETGVSTDGYLKEFSGWTNEFIYPPYHI 302
Query: 304 RAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+++NF+ PKS LM + G + A+ YRF YGD L+
Sbjct: 303 HLPTAMLTNFNAPKSINLMCAATMGGEKNVMNAMNVAVKEKYRFGCYGDALLI 355
>gi|281423270|ref|ZP_06254183.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
oris F0302]
gi|281402606|gb|EFB33437.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
oris F0302]
Length = 416
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 133/429 (31%), Positives = 208/429 (48%), Gaps = 97/429 (22%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ E+D+ LP RIA P+ RD ++L++ +SD + +LP +L + +V+N
Sbjct: 8 ISEYDYVLPDERIAKFPLPQRDHSKLLMYEHG-----KVSDDVFFNLPKYLPQHALMVYN 62
Query: 63 NTKVITAQLNGVRFCHINRREKE--ISCTLHMRVSPN------------SWSVYARPSKV 108
NT+VI A+++ R+E I L +P SW K
Sbjct: 63 NTRVIQARMHF-------RKETGALIEVFLMEPAAPTDYELMFQTKGQCSWLCMIGNLKK 115
Query: 109 IKKGDILHFFSQDGQ------------SRLEATVIDKWNTGEILLVFSISGIELERQISL 156
K+G + F G+ S AT + W + + + I + +
Sbjct: 116 WKEGSLKRDFDIKGEHLTLSVLLNYEKSAHRATGTNYW----VDFSWDNANINFAEILEV 171
Query: 157 VGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVY 216
G +P+PPY+ R+ + D + YQT Y+KI+GSVAAPTAGLHFT ++L + + GI+
Sbjct: 172 AGELPIPPYLNRE--TEESDKLTYQTVYSKIKGSVAAPTAGLHFTDDVLRAIEARGIERE 229
Query: 217 FVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLL 276
VTLH+GAGTF PVK ++ H MH+E +I +N +K + ++VGTTS+R L
Sbjct: 230 EVTLHIGAGTFKPVKSKEIYGHEMHTE--YIVVHRHTLVNLIKYE-CKAIAVGTTSVRTL 286
Query: 277 ET-------------ATTEDGIINPWSGF------------------------------- 292
E+ AT E+ ++ W +
Sbjct: 287 ESLYYMGVKLENNPDATEEELHVSQWEPYEKAREGGLINGITPVHAIQNLIDWLDKAGVE 346
Query: 293 -----TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
T I I PGY ++ V +L++NFH P+STLL+LVSAF + +K+Y +A+++ +RF
Sbjct: 347 VLHSSTQILIAPGYEYKIVKMLVTNFHQPQSTLLLLVSAFVK-GDWRKIYDYALANNFRF 405
Query: 348 YSYGDTSLL 356
SYGD+SLL
Sbjct: 406 LSYGDSSLL 414
>gi|153951843|ref|YP_001398182.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. doylei 269.97]
gi|152939289|gb|ABS44030.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. doylei 269.97]
Length = 343
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 129/364 (35%), Positives = 192/364 (52%), Gaps = 33/364 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
+++ +D+ L IA P P++ ARL+V N +L LP N AI
Sbjct: 6 LLLSSYDYTLANELIANYPTNPKEDARLLVFDRKNKEIFHTTFKNLQDFLP-----NCAI 60
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMR-VSPNSWSVYARPSKVIKKGDILHFF 118
FN+TKVI A++ G + +I LH ++ ++ A+ +KK +IL+F
Sbjct: 61 FFNDTKVIKARIYGNK-----ASGGKIELFLHQPFLNSHNPLFLAQIKGRVKKDEILYF- 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVF-----SISGIELERQISLVGTIPLPPYIARKRPID 173
+ L+A +++ N G + F ++ L + +G IPLPPYI KR +
Sbjct: 115 ----KEDLKAYIVELLNEGLRKVQFFQNDKTLDTSNLYNLLDKIGHIPLPPYI--KREDE 168
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D DYQ+ +AK G+VAAPTA LHF+ +L L ++Y +TLHVGAGTF V+ E
Sbjct: 169 KSDLKDYQSIFAKNLGAVAAPTASLHFSEIMLENLRKKH-EIYHLTLHVGAGTFKGVECE 227
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
+ +H MHSE I + ++S ++ I+ VGTT R +E +GF
Sbjct: 228 NIQEHKMHSEFFNIPKRACEIIDSKQA----ILGVGTTVTRTIEYYAR----TKTKNGFC 279
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
++F+ P + L++NFHLPKSTL+MLVSAF G E+ K+Y+ AI YRFYSYGD
Sbjct: 280 DLFLHPQNPPIRQNHLLTNFHLPKSTLIMLVSAFIGREQCLKLYELAIKEKYRFYSYGDA 339
Query: 354 SLLF 357
L+
Sbjct: 340 MLIL 343
>gi|34557262|ref|NP_907077.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Wolinella
succinogenes DSM 1740]
gi|34482978|emb|CAE09977.1| RIBOSYLTRANSFERASE-ISOMERASE [Wolinella succinogenes]
Length = 343
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 122/358 (34%), Positives = 186/358 (51%), Gaps = 32/358 (8%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
+D++LP IA P+ P++ ARL+V N ++ H S+ F+ IVFN+TK
Sbjct: 12 YDYELPEELIASHPIHPKNQARLLVY--NRKDGSILHTHF-SEFERFIPQEALIVFNDTK 68
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSR 125
VI A+ G ++E L + + +K G L ++ +++
Sbjct: 69 VIKARFFG-------KKESGGGVELLYHKPLGVERFWVQIKGRVKLGQTL-LLAEGWRAQ 120
Query: 126 LEA------TVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ A + W+ + + + + LERQ G +PLPPYI KR A D V+
Sbjct: 121 ILALGEGGFREVSFWDERGVKVELAQLLLFLERQ----GHVPLPPYI--KRTDTALDEVE 174
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQ+ +AK +G++AAPTA LHF + RL FVTLHVGAGTF+ V+ ED +H
Sbjct: 175 YQSVFAKHEGAIAAPTASLHFEETDMVRLKE-RFDHAFVTLHVGAGTFLGVESEDIRNHS 233
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH E FI +AQ + + +I+++GTT+ R +E + G ++F+ P
Sbjct: 234 MHKERYFISESSAQKIK----QASQILAIGTTAARTIEYYVR----TSKKEGECDLFLHP 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
G L++NFHLP+STLLMLVSAF +E +++Y A+ YRF+SYGD L+
Sbjct: 286 GNPPLKTTALLTNFHLPQSTLLMLVSAFITPKECQRVYAQALKERYRFFSYGDGMLIL 343
>gi|288928463|ref|ZP_06422310.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella sp. oral taxon 317 str. F0108]
gi|288331297|gb|EFC69881.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella sp. oral taxon 317 str. F0108]
Length = 407
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 132/427 (30%), Positives = 201/427 (47%), Gaps = 102/427 (23%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+K++++DLP RIA P+ RD ++L+V + +S S++ +L +VFN
Sbjct: 8 IKDYNYDLPDERIAKFPLPQRDKSKLLVYNHG-----EVSQDEFSNITRYLPQGALMVFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NTKVI A+L+ R++ S + P ++ A ++ + D ++ G
Sbjct: 63 NTKVIQARLH--------FRKETGSLIEIFLLEP---ALPADYEQMFQTTDACSWYCMVG 111
Query: 123 QSRLEATVIDKWNTGEILLVFSISG------IELERQISL-------------------- 156
+ KW G + I+G + ER +S
Sbjct: 112 N-------LKKWKGGPLTTTVEIAGQPAAVQLTAERDMSCETALKIDFKWTGNKLSFAEL 164
Query: 157 ---VGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGI 213
G +P+PPY+ R D YQT Y+KI+GSVAAPTAGLHFT +L+ + GI
Sbjct: 165 LDKAGELPIPPYLNRN--TQESDKTTYQTVYSKIKGSVAAPTAGLHFTQRVLADIDQHGI 222
Query: 214 KVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSL 273
+TLHVGAGTF PVK E+ + H MH+E I T L + + ++VGTTS+
Sbjct: 223 DREELTLHVGAGTFKPVKSEEIEGHSMHTEYVCIRRTT---LEKLLQHNCQAIAVGTTSV 279
Query: 274 RLLET-------------ATTEDGIINPWSGF---------------------------- 292
R LE+ + E +N W +
Sbjct: 280 RTLESLYYMGCKVKANPNVSLEQLHVNQWEPYEPTPTNITPTEAIGELIAYMDRNNLPSL 339
Query: 293 ---TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
T I I PGY+++ V L++NFH P+STLL+LVSAF G + K +Y++A+ + +RF S
Sbjct: 340 HSSTQIIIAPGYQYKIVKRLVTNFHQPQSTLLLLVSAFVG-GDWKSIYRYALDNDFRFLS 398
Query: 350 YGDTSLL 356
YGD+S+L
Sbjct: 399 YGDSSIL 405
>gi|261880535|ref|ZP_06006962.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
bergensis DSM 17361]
gi|270332758|gb|EFA43544.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
bergensis DSM 17361]
Length = 421
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 133/423 (31%), Positives = 197/423 (46%), Gaps = 80/423 (18%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +++++L RIA P+ RD ++L++ + +SD + +LP +L +V N
Sbjct: 8 ISDYNYELADERIAKFPLTQRDHSKLLLYNKG-----KVSDDVFYNLPNYLPEGALLVCN 62
Query: 63 NTKVITAQLNGVR----FCHINRREKEISCTLHMRVSPN---SWSVYARPSKVIKKGDIL 115
NT+VI A+++ + + E + SW K K+G +
Sbjct: 63 NTRVIQARMHFRKETGALIEVFLMEPALPADYEQMFQSTGRCSWLCMVGNLKKWKEGTLE 122
Query: 116 HFFSQDGQSRLEATVIDKWNTGE--------ILLVFSISGIELERQISLVGTIPLPPYIA 167
F G +D+ T E I V+ S + + VG +P+PPY+
Sbjct: 123 RDFQIKGHRLTLTASMDRDRTQEQSGGTNYWIDFVWDNSEVNFADILETVGELPIPPYLN 182
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R+ D YQT Y+KI GSVAAPTAGLHFT +L + + GI VTLHVGAGTF
Sbjct: 183 RE--AQESDKTTYQTVYSKINGSVAAPTAGLHFTDEVLQAIDAKGITRDEVTLHVGAGTF 240
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE---------- 277
PVK E D H MH+E I T Q L + ++VGTTS+R LE
Sbjct: 241 RPVKSETIDGHSMHTEYVVIHRHTLQRL---LEHDCQAIAVGTTSVRTLESLYYMGVKLS 297
Query: 278 --TATTEDGI-INPWSGF-----------------------------------------T 293
+ TED + +N W + T
Sbjct: 298 QCSDLTEDQLHVNQWEPYDLPHDAEGLVLVEDKAVTVRSAIQNLLDYLDRDNLDTLHSST 357
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
I I PGY ++ V +L++NFH P+STLL+LVSAF + +K+Y +A+++ +RF SYGD+
Sbjct: 358 QIIIAPGYTYKIVKMLITNFHQPQSTLLLLVSAFLK-GDWRKVYDYALANDFRFLSYGDS 416
Query: 354 SLL 356
SLL
Sbjct: 417 SLL 419
>gi|283955989|ref|ZP_06373478.1| LOW QUALITY PROTEIN: S-adenosylmethionine:tRNA
ribosyltransferase-isomerase [Campylobacter jejuni
subsp. jejuni 1336]
gi|283792465|gb|EFC31245.1| LOW QUALITY PROTEIN: S-adenosylmethionine:tRNA
ribosyltransferase-isomerase [Campylobacter jejuni
subsp. jejuni 1336]
Length = 342
Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 131/364 (35%), Positives = 191/364 (52%), Gaps = 33/364 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
+++ +D+ L IA P P++ ARL+V N +L LP N AI
Sbjct: 5 LLLSSYDYTLANELIANYPANPKEDARLLVFDRKNKEIFHTTFKNLQDFLP-----NCAI 59
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMR-VSPNSWSVYARPSKVIKKGDILHFF 118
FN+TKVI A++ G + +I LH ++ ++ A+ +KK +IL+F
Sbjct: 60 FFNDTKVIKARIYGNK-----ASGGKIELFLHQPFLNSHNPLFLAQIKGRVKKDEILYF- 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVF-----SISGIELERQISLVGTIPLPPYIARKRPID 173
+ L+ V++ + G + F ++ L + +G IPLPPYI KR +
Sbjct: 114 ----REDLKVRVVELLDDGLRKVQFFQNDKTLDTSNLYNLLDKIGHIPLPPYI--KREDE 167
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D DYQ+ +AK G+VAAPTA LHF+ +L L ++Y +TLHVGAGTF V+ E
Sbjct: 168 KSDLKDYQSIFAKNLGAVAAPTASLHFSETMLENLRKKH-EIYHLTLHVGAGTFKSVECE 226
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
+ H MHSE F + P QA + S+ I+ VGTT R +E +GF
Sbjct: 227 NIQKHKMHSE--FFNIP-QQACEIIDSKQA-ILGVGTTVTRTIEYYAR----TKTKNGFC 278
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
++F+ P + L++NFHLPKSTL+MLVSAF G E+ K+Y+ AI YRFYSYGD
Sbjct: 279 DLFLHPQNPPIRQNHLLTNFHLPKSTLIMLVSAFIGREQCLKLYELAIKEKYRFYSYGDA 338
Query: 354 SLLF 357
L+
Sbjct: 339 MLIL 342
>gi|118475238|ref|YP_892279.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter fetus subsp. fetus 82-40]
gi|261885962|ref|ZP_06010001.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter fetus subsp. venerealis str. Azul-94]
gi|226736735|sp|A0RPZ6|QUEA_CAMFF RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|118414464|gb|ABK82884.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter fetus subsp. fetus 82-40]
Length = 339
Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 123/359 (34%), Positives = 189/359 (52%), Gaps = 38/359 (10%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVIS-DHLVSDLPAFLNSNDAIVFNNT 64
+D+ LP IA P P++ ARL+V + +L LP AI+FN+T
Sbjct: 10 YDYKLPQDLIATAPTMPKEEARLLVYDRQKDSVFHLKFKNLSEILPEC-----AIIFNDT 64
Query: 65 KVITAQLNGVRFCHINRREK--EISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
KVI A++ G R++ EI L+ + + +S Y R +K G L F
Sbjct: 65 KVIKARIYG-------RKDSGAEIQMLLNQPLQNSLFSCYIRGK--VKVGTKLKF----- 110
Query: 123 QSRLEATVIDKWNTGEILLVFS-----ISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+EA V++ + ++ F ++ E+ +S +G +PLPPYI R+ D D
Sbjct: 111 DLGVEAEVLELKDDSSRIVKFKKNEQILNTSEIYNILSHIGHVPLPPYIKREDTPD--DE 168
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
+ YQ+ +AK +G+VAAPTA LHF +L L + ++TLHVGAGTF V+ D +
Sbjct: 169 IWYQSIFAKNEGAVAAPTASLHFNDQMLDDLNKTH-DISYITLHVGAGTFKGVEHCDIRE 227
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MHSE I ++S +++ VGTT R +E GF ++F+
Sbjct: 228 HKMHSEFYCISKKAKNIIDS----DIKLLGVGTTVTRCIEYYYR----TKQPKGFCDLFL 279
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
P + D L++NFHLPKSTL+MLV++F G+E+T ++Y+ A+ + Y+FYSYGD L+
Sbjct: 280 HPDNKPLRQDFLLTNFHLPKSTLIMLVASFIGLEKTMEIYKQAVENRYKFYSYGDGMLI 338
>gi|124516476|gb|EAY57984.1| putative queuosine biosynthesis protein [Leptospirillum rubarum]
Length = 385
Score = 175 bits (444), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 124/362 (34%), Positives = 182/362 (50%), Gaps = 36/362 (9%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
E+D+DLP RI L P R +RL+VV + P + + + FL D +V N++
Sbjct: 40 EYDYDLPEDRIRLFPPKNRGESRLLVVGRDSGGPYFGT---MEEFSRFLFPGDLLVLNDS 96
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKG-DILHFFSQDGQ 123
+V+ A+ V R+ E+ + ++P S P + + KG S G
Sbjct: 97 RVLPAR---VFIRAPTGRKIEL-----LFLNPQDPS----PVRFLGKGIGSSSTLSLPGG 144
Query: 124 SRL--------EATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
R+ E + E LL + LE G +PLPPYI + R
Sbjct: 145 GRVRDIRYLPEEGCFQGVYEGEETLLSW------LESH----GEMPLPPYIRKARDHHPS 194
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT +++ GSVAAPTAGLHFT LL L G++ VTLHVG GTF P+
Sbjct: 195 DRERYQTVFSRHAGSVAAPTAGLHFTEALLEHLKDKGVETATVTLHVGIGTFRPLGPGGV 254
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
H+MH+E + T Q + + RG R+ +VGTT +R LET + + + +T +
Sbjct: 255 GQHVMHAERFLVPDETVQKIEDARRRGSRVFAVGTTVMRTLETW-GQHPVRDAVPAWTRL 313
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIE-ETKKMYQHAISHAYRFYSYGDTS 354
FI PG+ FR VD L++NFH P+STL++LV +F G + +Y+ A+ + F SYGD
Sbjct: 314 FIRPGFPFRVVDGLLTNFHQPRSTLVVLVDSFLGGNGRWRSLYRQALEEGFMFLSYGDAM 373
Query: 355 LL 356
L+
Sbjct: 374 LI 375
>gi|294673506|ref|YP_003574122.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella ruminicola 23]
gi|294472055|gb|ADE81444.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella ruminicola 23]
Length = 405
Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 130/405 (32%), Positives = 196/405 (48%), Gaps = 62/405 (15%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++++ LP RIA P+ RD ++L+V +S + +LP +L +VFN
Sbjct: 10 ISDYNYPLPDERIAKFPIAQRDHSKLLVYRQGQ-----VSHDVFYNLPEYLPKGALMVFN 64
Query: 63 NTKVITAQLN------GVRFCHINRREKEISCTLHMRVSPN-SWSVYARPSKVIKKGDIL 115
NTKVI A+++ + + + L + S +W K K+G +
Sbjct: 65 NTKVIQARMHFRKDTGALIEVFLLEPAQPSDYELIFQTSEKCAWYCLVGNLKKWKEGTLR 124
Query: 116 HFFSQDGQSRL-EATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
GQ + AT T + G I +G +P+PPY+ R+
Sbjct: 125 REIEIKGQQVVVTATRGPIHGTSHRIDFEWTGGFSFAEIIDAMGELPIPPYLNRE--TQE 182
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D YQT Y+KI+GSVAAPTAGLHFT +L+ + + GI+ +TLHVGAGTF PVK E+
Sbjct: 183 SDKTTYQTVYSKIKGSVAAPTAGLHFTPEVLAAVDAHGIEREELTLHVGAGTFKPVKSEE 242
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-------------ATT 281
H MH+E + T + L + G ++VGTTS+R LE+ A+
Sbjct: 243 IQGHEMHTEYISVRRDTIRKL---LAHDGCAIAVGTTSVRTLESLYYMGLKVMQNPEASE 299
Query: 282 EDGIINPWSGF------------------------------TNIFITPGYRFRAVDILMS 311
+D +N W + T I I PGY + V +L++
Sbjct: 300 DDLHVNQWEPYDTDTQVSTVESLTALGAWMDAHGLEVLHSSTQIIIAPGYNYHIVKMLVT 359
Query: 312 NFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
NFH P+STLL+LVSAF + K+Y +A+++ +RF SYGD+SLL
Sbjct: 360 NFHQPQSTLLLLVSAFVK-GDWHKIYDYALANDFRFLSYGDSSLL 403
>gi|228470898|ref|ZP_04055743.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas uenonis 60-3]
gi|228307295|gb|EEK16309.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas uenonis 60-3]
Length = 357
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/353 (32%), Positives = 173/353 (49%), Gaps = 9/353 (2%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
FD+ LP IA P RD +R+MV+H I D+ + D VFN+TK
Sbjct: 10 FDYKLPEELIAQYPTTFRDQSRMMVLHRTDGS---IEHKNFVDILDYFGEKDTFVFNDTK 66
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSR 125
V A+L G++ N+ + E+ + S W V P++ I+ G+ L F + G
Sbjct: 67 VFPARLYGLK--EKNQAKIEVFLLRELNESLRLWDVLVDPARKIRIGNKLEFGEEGGAPV 124
Query: 126 LEATVIDKW-NTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTT 183
L A VID + G IL ++ S + + + +G PLP I KRP + D YQ+
Sbjct: 125 LVAEVIDNTISRGRILRFLYDGSHEDFLKDLYSLGEAPLPQEI--KRPAEPSDLERYQSV 182
Query: 184 YAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSE 243
+AK G+V AP A LHF+ +L +L G + F+TLH ++ ++VE + + +E
Sbjct: 183 FAKHIGAVCAPAASLHFSDIILHKLRLQGCNLAFLTLHHNLSSYQEIEVEAISKYKVENE 242
Query: 244 IGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRF 303
+I +N + +IV+VG T +R LET + DG + +SG+TN FI P Y
Sbjct: 243 EMYIPLECCDIVNQARDDNAQIVAVGATVMRALETGVSTDGYLKEFSGWTNEFIYPPYHI 302
Query: 304 RAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+++NF+ PKS LM + G + A+ YRF YGD L+
Sbjct: 303 HLPTAMLTNFNAPKSINLMCAATMGGEKNVMNAMNVAVKEKYRFGCYGDALLI 355
>gi|322379073|ref|ZP_08053476.1| tRNA ribosyltransferase [Helicobacter suis HS1]
gi|322379937|ref|ZP_08054214.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter suis HS5]
gi|321147635|gb|EFX42258.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter suis HS5]
gi|321148565|gb|EFX43062.1| tRNA ribosyltransferase [Helicobacter suis HS1]
Length = 349
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 122/372 (32%), Positives = 193/372 (51%), Gaps = 62/372 (16%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
+ + LP IA P+ P++ A+LM+ + ++ + + F N IV N+TK
Sbjct: 20 YTYHLPKHLIASHPIKPKEEAKLMIYERARN---RLTHTTFAHIFEFFPKNALIVLNDTK 76
Query: 66 VITAQLNGVR----------------FCHINRREK-EISCTLHMRVSPNSWSVYARPSKV 108
VI A+L G + FC + R K + L + + + +V
Sbjct: 77 VIKARLFGRKKSGHLVEILIHHPKDNFCLVQIRGKVHVGLILQL-----DHGYFCQVLEV 131
Query: 109 IKKG-DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIA 167
+ G ++ FF + G +W +E+ + ++G +P+PPY+
Sbjct: 132 LSNGMRLVGFFKESGH-------FLEW-------------VEVLDMLEILGHMPIPPYL- 170
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
KR + +D DYQ+ +AK G++AAPTA LHF+ + + L+S K F+TLHVGAGTF
Sbjct: 171 -KRADEIKDLQDYQSVFAKNLGAIAAPTASLHFSESTKAYLLS-HFKHAFLTLHVGAGTF 228
Query: 228 MPVKVEDTDDHIMHSEIGFIDAP--TAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI 285
+ V+ ED +H MHSE F+D P T QAL+ I+ +GTT+LR +E + G
Sbjct: 229 LGVECEDIREHGMHSE--FVDIPLITQQALDHAPC----ILCIGTTALRAVEH--YKRGF 280
Query: 286 INPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAY 345
P N+F+ G + V L++NFHLP+STL+MLV++ G+++ ++Y+ AI H Y
Sbjct: 281 KTPHC---NLFLHAGNPVKHVQALLTNFHLPQSTLIMLVASMLGLDKCLELYKQAIKHHY 337
Query: 346 RFYSYGDTSLLF 357
RFYSYGD L+
Sbjct: 338 RFYSYGDGMLIL 349
>gi|237750185|ref|ZP_04580665.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter bilis ATCC 43879]
gi|229374079|gb|EEO24470.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter bilis ATCC 43879]
Length = 376
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 128/388 (32%), Positives = 202/388 (52%), Gaps = 59/388 (15%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
+DF LP IA P+ P+++A+L++ H I+ +L ++ + IV N+T+
Sbjct: 10 YDFTLPNDLIATEPIKPKENAKLLIYHNG-----KITHTTFYELFNYIPKDYLIVLNDTR 64
Query: 66 VITAQL--NGVRFCHINRRE----------------KEISCTLHM-------------RV 94
VI A+L N + +++ + K +S LH+ +
Sbjct: 65 VINARLFANKLSLESLHKTQILNDSILPTKREIFYHKHLSNNLHLVQIKGKAKLHDIFTL 124
Query: 95 SPNSWSVYARPSKVIKKG-DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQ 153
N+ +V+ + + G I+ FF+ S L+ ++ N E L E+
Sbjct: 125 QYNNTNVFIQVVDIKDDGYKIVSFFTLKDISALKQNLLQ--NHAEKL--------SQEKV 174
Query: 154 ISLV---GTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLIS 210
+SL+ G IPLPPY+ KR +D DYQ+ +A+ +GSVAAPTA LHF+ ++ + +
Sbjct: 175 LSLLQTCGNIPLPPYM--KRESTEKDSKDYQSIFARNEGSVAAPTASLHFSESMF-KYLK 231
Query: 211 IGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGT 270
FVTLHVGAGTF P+ E+ +H +H+E I AQ + K +I+ VGT
Sbjct: 232 ENYNHAFVTLHVGAGTFKPITCENILNHKIHTESCIIAKKEAQKILESK----KILCVGT 287
Query: 271 TSLRLLETATTED--GIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFC 328
T++R +E E+ I + G IF+ P + V L++NFHLPKS+LLMLVS+
Sbjct: 288 TAMRSVEWLIRENVAQIESDIMGENAIFLNPFNPPKKVKALLTNFHLPKSSLLMLVSSII 347
Query: 329 GIEETKKMYQHAISHAYRFYSYGDTSLL 356
G +ET ++Y+ AI++ YRFYSYGD L+
Sbjct: 348 GRKETLRIYEEAIANKYRFYSYGDGMLI 375
>gi|289677976|ref|ZP_06498866.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. syringae FF5]
Length = 179
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/161 (53%), Positives = 110/161 (68%), Gaps = 1/161 (0%)
Query: 196 AGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQAL 255
AG HF LL + + G++ FVTLHVGAGTF PV+VE +DH MHSE + A+
Sbjct: 2 AGRHFDQPLLEAIAAKGVETAFVTLHVGAGTFQPVRVEQIEDHHMHSEWLEVGQDVVDAV 61
Query: 256 NSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHL 315
+ ++RGGR+++VGTTS+R LE+A DG + P+SG T+IFI PG F VD L++NFHL
Sbjct: 62 AACRARGGRVIAVGTTSVRSLESAA-RDGELKPFSGDTDIFIYPGRPFHVVDALVTNFHL 120
Query: 316 PKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
P+STLLMLVSAF G ET Y AI H YRF+SYGD +
Sbjct: 121 PESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFSYGDAMFI 161
>gi|282877518|ref|ZP_06286336.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella buccalis ATCC 35310]
gi|281300342|gb|EFA92693.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella buccalis ATCC 35310]
Length = 432
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 139/445 (31%), Positives = 201/445 (45%), Gaps = 113/445 (25%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++ +DLP RIA P+ RD ++L++ + V HL LP ++FN
Sbjct: 8 ISDYQYDLPDDRIAKFPIAQRDHSKLLLYNQGKVGEDVFY-HLKDHLP----QGALMIFN 62
Query: 63 NTKVITAQL-----NGVR--------------------------FCHIN--RREKEISCT 89
NTKVI A++ G R +C I ++ KE S
Sbjct: 63 NTKVIQARMYFMKSTGARIEAFLMEPAAPTDYEQIFQTRGHCAWYCMIGNLKKWKEGSLA 122
Query: 90 LHMRVSPNSWSV-YARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGI 148
+ S ++ R S+ +K D +G +L A W I + I
Sbjct: 123 RSYEIKGRSLTLTITRKSQ--QKED-----QAEGNLQLSAPATHHW----IEFDWDAEDI 171
Query: 149 ELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRL 208
+ +G +P+PPY+ R+ D YQT Y+KI+GSVAAPTAGLHFT+++L L
Sbjct: 172 SFSEILEDMGELPIPPYLNRE--TQESDKTTYQTVYSKIKGSVAAPTAGLHFTNDVLKSL 229
Query: 209 ISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSV 268
GI VTLHVGAGTF PVK ++ +DH MH+E + Q L + ++V
Sbjct: 230 DEHGIDREEVTLHVGAGTFKPVKSQEIEDHDMHTEYICVH---QQTLEKLLRHDASAIAV 286
Query: 269 GTTSLRLLET---------------------------------ATTE-------DGI--- 285
GTTS+R LE+ TTE DGI
Sbjct: 287 GTTSVRTLESLYYMGVYLSEHPDASEAELHVSQWAPYERMREDGTTEQLDGGLIDGITSM 346
Query: 286 --------------INPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIE 331
+ T I I PGY ++ V +L++NFH P+STLL+LVSAF
Sbjct: 347 QAIQNVLDYLKRNQLGALHSSTQIIIAPGYEYKIVKMLITNFHQPQSTLLLLVSAFVH-G 405
Query: 332 ETKKMYQHAISHAYRFYSYGDTSLL 356
+ +K+Y +A++H +RF SYGD+SLL
Sbjct: 406 DWRKIYDYALAHDFRFLSYGDSSLL 430
>gi|307565267|ref|ZP_07627760.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella amnii CRIS 21A-A]
gi|307345936|gb|EFN91280.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella amnii CRIS 21A-A]
Length = 423
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 129/423 (30%), Positives = 196/423 (46%), Gaps = 80/423 (18%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++++ LP SRIA P+ RD+++L++ I++ + +LP +L S +V N
Sbjct: 10 ISDYNYHLPDSRIAKYPLAKRDNSKLLLYKQG-----KITEDVFYNLPKYLPSGGLMVCN 64
Query: 63 NTKVITAQLN------GVRFCHINRREKEISCTLHMRVSPN-SWSVYARPSKVIKKGDIL 115
NTKVI A+++ + + + L + + N SW K K G +
Sbjct: 65 NTKVIQARIHFRKETGALIEIFLLEPADPVDYELMFQTTHNCSWLCMVGNLKKWKDGKLK 124
Query: 116 HFFSQDGQSRLEATVIDKWNTGEIL--------LVFSISGIELERQISLVGTIPLPPYIA 167
F G+ ++K T L + + + +VG +P+PPY+
Sbjct: 125 RKFDIKGEKLTLIASLNKEKTLNTLGGTNHWIDFTWDNENVSFAEILEIVGELPIPPYL- 183
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R + D YQT Y+KI+GSVAAPTAGLHFT +L + GI +TLHVGAGTF
Sbjct: 184 -NRDTEESDKETYQTVYSKIKGSVAAPTAGLHFTPEVLKAIDECGIVRDELTLHVGAGTF 242
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK E+ + H MHSE + T L + ++VGTTS+R LE+
Sbjct: 243 KPVKSEEIEGHNMHSEYVVVQRHT---LEQLLLHDCSAIAVGTTSVRTLESLYYMGIHLE 299
Query: 279 ----ATTEDGIINPWSGF-----------------------------------------T 293
A+ D I W + T
Sbjct: 300 ENPNASEADLHIKQWEPYDLPHNEEGLVIIKGVAITVRKAIENILFYLKKDNLQALHSST 359
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
I I PGY ++ V L++NFH P+STL++LVSAF + + +Y +A++H +RF SYGD+
Sbjct: 360 QIIIAPGYTYKIVKALITNFHQPQSTLILLVSAFVK-GDWRNIYDYALNHDFRFLSYGDS 418
Query: 354 SLL 356
SLL
Sbjct: 419 SLL 421
>gi|328471546|gb|EGF42428.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus rhamnosus MTCC 5462]
Length = 167
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 84/167 (50%), Positives = 114/167 (68%), Gaps = 1/167 (0%)
Query: 192 AAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPT 251
AAPTAGLH+T LL ++ G+K+ ++TLHVG GTF PV E+ + H MHSE +
Sbjct: 1 AAPTAGLHWTKELLQKVQDKGVKLVYLTLHVGLGTFRPVVEENIEAHKMHSEFYRLTPEA 60
Query: 252 AQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGYRFRAVDILM 310
A LN V+ GGRI++ GTTS+R LE T+ DG I SG+T+IFI PGY+++ VD +
Sbjct: 61 AATLNEVRDNGGRIIATGTTSIRTLEAIGTKFDGAIKADSGWTDIFIKPGYQWKVVDAFI 120
Query: 311 SNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+NFHLPKSTL+MLV+AF G + Y+HAI YRF+S+GD ++
Sbjct: 121 TNFHLPKSTLVMLVAAFTGRDTILNAYKHAIEEKYRFFSFGDAMFIY 167
>gi|282858829|ref|ZP_06267974.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella bivia JCVIHMP010]
gi|282588398|gb|EFB93558.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella bivia JCVIHMP010]
Length = 423
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 134/431 (31%), Positives = 203/431 (47%), Gaps = 96/431 (22%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ ++++ LP RIA P+ RD+++L++ H + V+ D + +LP +L +VF
Sbjct: 10 ISDYNYLLPDERIAKFPLAKRDNSKLLLYKHGD-----VVED-IFYNLPKYLPKGGLMVF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKE--ISCTLHMRVSPN------------SWSVYARPSK 107
NNTKVI A+++ R+E I L +P SW K
Sbjct: 64 NNTKVIQARIHF-------RKETGALIEVFLLEPTAPTDYELMFQTTHTCSWLCMVGNLK 116
Query: 108 VIKKGDILHFFSQDGQSRLEATVIDKWNTGE--------ILLVFSISGIELERQISLVGT 159
K G + F G +++ T I + + + + +VG
Sbjct: 117 KWKDGVLKREFEIKGHKLTLIASLNRDKTANTPGGTNHWIDFSWDNANVSFAEILEMVGE 176
Query: 160 IPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVT 219
+P+PPY+ R+ + D YQT Y+KI+GSVAAPTAGLHFT +L L + GI +T
Sbjct: 177 LPIPPYLNRE--TEESDKETYQTVYSKIKGSVAAPTAGLHFTPEVLQALDASGIVRDELT 234
Query: 220 LHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET- 278
LHVGAGTF PVK E+ + H MH+E + T L ++ + ++VGTTS+R LE+
Sbjct: 235 LHVGAGTFKPVKSEEIEGHNMHTEYVVVHRHT---LENLLAHDCSAIAVGTTSVRTLESL 291
Query: 279 ------------ATTEDGIINPWSGF---------------------------------- 292
AT + +N W +
Sbjct: 292 YYMGVHLAINPDATEAELHVNQWEPYDLEHNEAGLVIINGKVITVASAIENILNYLKKDN 351
Query: 293 -------TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAY 345
T I I PG+ ++ V L++NFH P+STLL+LVSAF + +K+Y +A+SH +
Sbjct: 352 LQALHSSTQIIIAPGFTYKIVKALVTNFHQPQSTLLLLVSAFVK-GDWRKIYDYALSHDF 410
Query: 346 RFYSYGDTSLL 356
RF SYGD+SLL
Sbjct: 411 RFLSYGDSSLL 421
>gi|300727139|ref|ZP_07060558.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
bryantii B14]
gi|299775683|gb|EFI72274.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
bryantii B14]
Length = 424
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 132/435 (30%), Positives = 202/435 (46%), Gaps = 101/435 (23%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++ +DLP RIA P+ RD ++L++ +S+ + ++P L +V N
Sbjct: 8 ISDYSYDLPDERIAKFPLSQRDHSKLLLYKHG-----EVSEDVFYNIPNHLPKGALMVCN 62
Query: 63 NTKVITAQLNGVRFCHINRREKE-ISCTLHMRVSPNSWSVYARPS------------KVI 109
NT+VI A++ H + I L +P + + + + K
Sbjct: 63 NTRVIQARM------HFRKATGALIEVFLMEPAAPTDYELMFQTTGHCAWLCMIGNLKKW 116
Query: 110 KKGDILHFFSQDGQSRLEATVIDKWNTGEIL-------------------LVFSISGIEL 150
K+G + FS +G E T++ GE L ++ +
Sbjct: 117 KEGSLKRDFSINGH---EFTLVASLRRGEALTPEQEKLTTHSGGTNYWVDFEWNTEKVNF 173
Query: 151 ERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLIS 210
+ VG +P+PPY+ R+ D YQT Y+KI+GSVAAPTAGLHFT ++LS L
Sbjct: 174 AEILEAVGELPIPPYLNRE--TQESDKTTYQTVYSKIKGSVAAPTAGLHFTDSVLSDLDK 231
Query: 211 IGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGT 270
GI VTLHVGAGTF PVK + D H MH+E + T + L ++VGT
Sbjct: 232 HGIVRDEVTLHVGAGTFKPVKSVEIDGHEMHTEYIVVHRHTFERL---LEHDCSAIAVGT 288
Query: 271 TSLRLLET-------------ATTEDGIINPWSGF------------------------- 292
TS+R LE+ A+ ++ ++ W+ +
Sbjct: 289 TSVRTLESLYYMGVYLEHHPDASEDELHVHQWTPYDDGRDGKLVDGITAVKAMQNILDYL 348
Query: 293 -----------TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAI 341
T I I PGY ++ V +L++NFH P+STLL+LVSAF + +K+Y +A+
Sbjct: 349 DRNNLEALHSSTQIIIAPGYEYKIVKMLITNFHQPQSTLLLLVSAFLK-GDWRKVYDYAL 407
Query: 342 SHAYRFYSYGDTSLL 356
SH +RF SYGD+SLL
Sbjct: 408 SHEFRFLSYGDSSLL 422
>gi|32266986|ref|NP_861018.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter hepaticus ATCC 51449]
gi|46576948|sp|Q7VG37|QUEA_HELHP RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|32263038|gb|AAP78084.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Helicobacter hepaticus ATCC 51449]
Length = 365
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 119/363 (32%), Positives = 188/363 (51%), Gaps = 28/363 (7%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISD--HLVSDLPAFLNSNDAIVFNN 63
+D+ LP S IA P PR+ A+L++ + S ++ SD H +P + +VFN+
Sbjct: 18 YDYTLPFSAIAQNPANPRERAKLLIYQRD-SGRIIHSDFYHFCDFVP----KDTLLVFND 72
Query: 64 TKVITAQLNGVRF-CHINR-REKEISCTLHMRVSPNSWSV---YARPSKVIKKGDILHFF 118
T+VI A++ + C+ + +K H + S ++ + +K GD L
Sbjct: 73 TRVIKARIYAHKLDCNTQKLSDKTFEIFYHKPLQSTSSAIPLFLVQIKGRVKCGDKLLIN 132
Query: 119 SQDGQSRLEATVIDKWNTGEILLVF-----SISGIELERQISLVGTIPLPPYIARKRPID 173
+ L A V + + G ++ F ++ I++ + G PLPPYI KR
Sbjct: 133 TDSTNPFLIAQVQECLDNGLRVVSFMQNEHALEYIQVLDMLEKYGHTPLPPYI--KREDS 190
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
+D YQ+ ++K GS+AAPTA LHF+ + I + F+TLH+GAGTFM V+
Sbjct: 191 CQDAHFYQSVFSKQLGSIAAPTASLHFSKESIES-IKAQFETCFLTLHIGAGTFMNVESA 249
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
D H++H E + +A A+ + +++ +GTTS R +E G
Sbjct: 250 DIRHHLIHKEFFSLSPQSAAAIQN----AHKVLCIGTTSARCVEYYAR----YKILQGEC 301
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IF+ P F+ VD L++NFHLPKSTL+MLVSA G E+ ++Y+ A+ YRFYSYGD
Sbjct: 302 DIFLYPSKSFKRVDYLLTNFHLPKSTLMMLVSAMVGREKCLELYKLALEKGYRFYSYGDG 361
Query: 354 SLL 356
L+
Sbjct: 362 MLI 364
>gi|167860510|gb|ACA05032.1| S-adenosylmethionine: tRNA ribosyltransferase-isomerase
[Flammeovirga yaeyamensis]
Length = 255
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/250 (39%), Positives = 136/250 (54%), Gaps = 51/250 (20%)
Query: 154 ISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGI 213
IS G PLPPYI R D ++ YQT Y+K +G+VAAPTAGLHFT+ +L L + G+
Sbjct: 13 ISAAGNTPLPPYIKRTATEDDKE--TYQTVYSKNEGAVAAPTAGLHFTNEVLDVLKNQGV 70
Query: 214 KVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSL 273
VTLHV AGTF P+ + DH MH+E I +AL ++ VGTTS+
Sbjct: 71 DEQEVTLHVSAGTFKPITADKVTDHDMHNEQIIITKENVKAL----IEANKVACVGTTSM 126
Query: 274 RLLETA------------------------TTEDGIINP--------------------W 289
R LE++ E G+ P
Sbjct: 127 RTLESSYWYGVRLLLDNNSTFDIQKLEAYERMESGVTLPSRQESFGAILKHMEEHNLDTI 186
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
G T+IFI PGY+F+ +D L++NFHLP +TL++L++AF G E+ +K+YQ A+ + YRF S
Sbjct: 187 HGETSIFIMPGYQFQVIDTLVTNFHLPSTTLVLLIAAFIG-EDWRKVYQAALDNDYRFLS 245
Query: 350 YGDTSLLFQK 359
YGD+S+LF+K
Sbjct: 246 YGDSSILFRK 255
>gi|255019226|ref|ZP_05291352.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL F2-515]
Length = 174
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 88/179 (49%), Positives = 120/179 (67%), Gaps = 6/179 (3%)
Query: 129 TVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQ 188
T +++ G +L FS GI E + +G +PLPPYI + R YQT YAK
Sbjct: 1 TCLEELEHGGRILEFSYEGIFYEV-LEQLGEMPLPPYIKEQLADQDR----YQTVYAKEN 55
Query: 189 GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFID 248
GS AAPTAGLHFT +LL ++ + G+++ FVTLHVG GTF PV VEDT +H MHSE +
Sbjct: 56 GSAAAPTAGLHFTEDLLEQISAKGVEIIFVTLHVGLGTFRPVDVEDTTNHKMHSEFYRLT 115
Query: 249 APTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITPGYRFRAV 306
+A+ +N +K++GG++V+VGTTS+R LET A+ DG + SG+T IFI+PGY F+AV
Sbjct: 116 EESAERINKIKAQGGKVVAVGTTSIRTLETIASRHDGKLVAESGWTEIFISPGYTFQAV 174
>gi|282879642|ref|ZP_06288373.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella timonensis CRIS 5C-B1]
gi|281306590|gb|EFA98619.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella timonensis CRIS 5C-B1]
Length = 432
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 125/442 (28%), Positives = 196/442 (44%), Gaps = 107/442 (24%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++ ++LP RIA P+ RD ++L++ + + + + +L +L ++FN
Sbjct: 8 ISDYQYELPDERIAKFPIAQRDHSKLLIYNHG-----KVGEDVFYNLYEYLPQGALMIFN 62
Query: 63 NTKVITAQLNGVR-------------------------------FCHINRREKEISCTLH 91
NTKVI A+++ + +C I +K S +L
Sbjct: 63 NTKVIQARMHFKKDTGALIEVFLMEPAMPADYEQIFQSKRHCAWYCMIGNLKKWKSGSLT 122
Query: 92 MRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELE 151
N SV + ++ D Q Q W I + +
Sbjct: 123 RIYHINQKSVTLQVTRREPATDE----HQPAQGLHATPSTHHW----IDFDWDAEDVSFA 174
Query: 152 RQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISI 211
+ +G +P+PPY+ R+ D YQT Y+KI+GSVAAPTAGLHFT+++L L
Sbjct: 175 EILESIGELPIPPYLNRE--TQESDKTTYQTVYSKIKGSVAAPTAGLHFTNSVLQSLDEH 232
Query: 212 GIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTT 271
GI +TLHVGAGTF PVK E+ H MH+E + Q L + ++VGTT
Sbjct: 233 GIDREELTLHVGAGTFKPVKSEEIKGHAMHTEYICVH---RQTLEKLLRHNVEAIAVGTT 289
Query: 272 SLRLLET-------------ATTEDGIINPWSGF-------------------------- 292
S+R LE+ AT ++ + W+ +
Sbjct: 290 SVRTLESLYYMGVFLETHPDATEDELHVKQWAPYERLHTDGQVEHLDGGLIDNISPKQAI 349
Query: 293 ------------------TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETK 334
T I I PGY+++ V +L++NFH P+STLL+LVSAF + +
Sbjct: 350 QNVLDYLVRNELESLHSSTQIIIAPGYQYKIVKMLITNFHQPQSTLLLLVSAFVN-GDWR 408
Query: 335 KMYQHAISHAYRFYSYGDTSLL 356
+Y +A++H +RF SYGD+SLL
Sbjct: 409 TIYDYALAHQFRFLSYGDSSLL 430
>gi|312132235|ref|YP_003999575.1| s-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Leadbetterella byssophila DSM 17132]
gi|311908781|gb|ADQ19222.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Leadbetterella byssophila DSM 17132]
Length = 394
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 138/410 (33%), Positives = 188/410 (45%), Gaps = 76/410 (18%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+KE+ + L +IA P PRD ++L+V IS + + FL +V N
Sbjct: 5 IKEYTYPLIEEQIARFPHSPRDESKLLVYKDGQ-----ISHQIFKQIGDFLPDGAHLVLN 59
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS-------------WSVYARPSKVI 109
+TKVI A+L R + I L + P++ W K
Sbjct: 60 DTKVIPARLYFTR-----QTGALIEIFLLNPLQPSTVLPIVMDETREVVWHCVIGNKKKW 114
Query: 110 KKGDILHFFSQDGQSRLEATVIDKW-NTGE---ILLVFSISGIELERQISLVGTIPLPPY 165
K ++L +G+ LE W GE + L + + + G IPLPPY
Sbjct: 115 KADEVL-----EGKFTLEGRSYKLWAKQGEDNAVALTWE-GDWAFSKVVEAYGNIPLPPY 168
Query: 166 IARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAG 225
+ KR D DYQT Y++ +G+VAAPTAGLHFT + L G+K FVTLHVGAG
Sbjct: 169 L--KRESQESDLTDYQTVYSEHEGAVAAPTAGLHFTDAVFQDLEGRGVKKSFVTLHVGAG 226
Query: 226 TFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-----AT 280
TFMPVK E+ +H MHSE + + Q LN + ++ I+ VGTTS+R LE+
Sbjct: 227 TFMPVKEENALNHPMHSEQIIV---SRQFLNEILAQEDFIIPVGTTSMRSLESMYWWGVK 283
Query: 281 TEDGIINPWS---------------------------------GFTNIFITPGYRFRAVD 307
G P+S G T I I P Y FR
Sbjct: 284 LIKGEDQPFSIEKLYPYQDHPPITARESFEALLKEMGDEGQLVGNTEIMIFPSYTFRVCK 343
Query: 308 ILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
L++NFH P STLL+LV+A G E +K+Y A YRF S+GD+SLL
Sbjct: 344 GLITNFHQPTSTLLLLVAALVGEETWRKIYAEAGQQGYRFLSFGDSSLLL 393
>gi|293418471|ref|ZP_06660906.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli B088]
gi|291324999|gb|EFE64414.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli B088]
Length = 286
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/306 (37%), Positives = 165/306 (53%), Gaps = 27/306 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R S RL+ +L P H +DL LN D +
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLL----SLDGPTGALTHGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + R SK K G
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEVLVERMLDDKRILAHIRASKAPKPG--AELLL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQI----SLVGTIPLPPYIARKRPIDAR 175
D +S + AT+ + +F + ER + + +G +PLPPYI RP +
Sbjct: 110 GDDES-INATMTARHGA-----LFEVE-FNDERSVLDILNSIGHMPLPPYI--DRPDEDA 160
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+
Sbjct: 161 DRELYQTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTI 220
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFT 293
+DHIMHSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T
Sbjct: 221 EDHIMHSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDT 280
Query: 294 NIFITP 299
IFI P
Sbjct: 281 QIFIYP 286
>gi|288925762|ref|ZP_06419693.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella buccae D17]
gi|315608288|ref|ZP_07883278.1| possible queuine tRNA-ribosyltransferase [Prevotella buccae ATCC
33574]
gi|288337417|gb|EFC75772.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella buccae D17]
gi|315250069|gb|EFU30068.1| possible queuine tRNA-ribosyltransferase [Prevotella buccae ATCC
33574]
Length = 424
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 131/426 (30%), Positives = 195/426 (45%), Gaps = 83/426 (19%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +++++L RIA P+ PRD ++L++ V HL LP + +VFN
Sbjct: 8 ISDYNYELLEERIAKFPIVPRDHSKLLLYKHGEVGEDVFY-HLTDHLP----NRALMVFN 62
Query: 63 NTKVITAQLNGVR----FCHINRREKEISCTLHMRVSPN---SWSVYARPSKVIKKGDIL 115
NT+VI A+++ + + E + + + SW K K+G +
Sbjct: 63 NTRVIQARMHFRKETGALIEVFLMEPAMPTDYELMFQTSGHCSWLCMIGNLKKWKEGMLR 122
Query: 116 HFFSQDGQS-RLEATVIDKWNTGEILLVFSISG---------------IELERQISLVGT 159
F G L AT++ + ++ G + + VG
Sbjct: 123 RNFDIKGNRLTLTATMLRDEQLDDRQKNMTVHGGGTNYWVDFDWDNQQVSFAEILEAVGE 182
Query: 160 IPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVT 219
+P+PPY+ R D YQT Y+KI+GSVAAPTAGLHFT ++L+ + GI VT
Sbjct: 183 LPIPPYL--NRATQESDKTTYQTVYSKIKGSVAAPTAGLHFTDDVLADVDRHGIVRDEVT 240
Query: 220 LHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET- 278
LHVGAGTF PVK + H MH+E + T + L G ++VGTTS+R LE+
Sbjct: 241 LHVGAGTFKPVKSMEIAGHKMHAEYIVVHRHTFERL---LEYGCSAIAVGTTSVRTLESL 297
Query: 279 ------------ATTEDGIINPWSGFTN-------------------------------- 294
A+ ED + W + N
Sbjct: 298 YYIGLYLEHHPEASEEDLHVGQWDPYDNGRNGKTVEGITPEQAIRNILSYLDRNGLEALH 357
Query: 295 ----IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
I I PGY ++ V +L++NFH P+STLL+LVSAF + KK+Y +A+ H +RF SY
Sbjct: 358 SSTQIIIAPGYEYKIVKMLITNFHQPQSTLLLLVSAFLK-GDWKKVYDYALKHDFRFLSY 416
Query: 351 GDTSLL 356
GD+SLL
Sbjct: 417 GDSSLL 422
>gi|27462194|gb|AAO15370.1| tRNA ribosyltransferase [Helicobacter bizzozeronii]
Length = 308
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/311 (35%), Positives = 166/311 (53%), Gaps = 29/311 (9%)
Query: 52 FLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKK 111
F + +V N+TKVI A+L F H ++ + + LH SP + R ++
Sbjct: 22 FFPPHALVVLNDTKVIKARL----FAHTAQK-RPVEILLHHATSPTACLAQMRGK--VRP 74
Query: 112 GDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELE-----RQISLVGTIPLPPYI 166
G +L + G S V++ + G +L F G LE + L+G +PLPPY+
Sbjct: 75 GLVLGL--EGGYS---CEVLEVLDNGLRVLSFKHGGELLEWAGVLEMLELLGHVPLPPYL 129
Query: 167 ARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGT 226
KRP +A+D DYQ+ +AK G++AAPTA LHF+ + L+ K F+TLHVGAGT
Sbjct: 130 --KRPDEAQDLQDYQSVFAKYPGAIAAPTASLHFSQSAKDHLLK-NFKHVFITLHVGAGT 186
Query: 227 FMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII 286
F+ V+ ED +H MH+E L+ I+ VGTT+LR E G+
Sbjct: 187 FLSVQSEDIREHPMHAEFCRSLPQAGLTLDEAP----YILCVGTTALRATEHYKRGFGL- 241
Query: 287 NPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYR 346
P +F+ G + L++NFHLP+STL+MLV++ G+++ ++Y+ AI H YR
Sbjct: 242 KP----CELFLHLGNPVKHAQALLTNFHLPESTLIMLVASMVGLDKCLELYKIAIEHHYR 297
Query: 347 FYSYGDTSLLF 357
FYSYGD L+
Sbjct: 298 FYSYGDGMLIL 308
>gi|315453597|ref|YP_004073867.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter felis ATCC 49179]
gi|315132649|emb|CBY83277.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter felis ATCC 49179]
Length = 341
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 116/359 (32%), Positives = 185/359 (51%), Gaps = 31/359 (8%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ + +DLP IA P+ P + A+L+V I+ + + F + +V N
Sbjct: 10 LSSYHYDLPAEYIASTPLLPPERAKLLVYKRATG---RITHSTFAHVFDFFPQDALVVLN 66
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVY-ARPSKVIKKGDILHFFSQD 121
+TKVI A+L G + ++ +H +P+S + A+ + +G ++
Sbjct: 67 DTKVIKARLYGRK-----ASGGKVELLIH---NPHSLHHFNAQIKGRVPQGGLIEL---- 114
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELER---QISLVGTIPLPPYIARKRPIDARDYV 178
Q + N ++ ++ E + L+G +P+PPY+ KR D
Sbjct: 115 DQGYSCEVLTPPANLRQVCFYHHQHPLKWEEVLDMLELLGHMPIPPYL--KRADTPTDTQ 172
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQ+ +AK G++AAPTA LHF+ + L++ + F+TLHVGAGTF+ V+ ED H
Sbjct: 173 TYQSVFAKHAGAIAAPTASLHFSESAKEHLLA-HFQHAFLTLHVGAGTFVGVECEDIRQH 231
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE FI T +AL+ I+ VGTT+LR +E ++ P ++F+
Sbjct: 232 PMHSEALFIPEETQRALD----HAPYILCVGTTALRGVEH-YKRGNVLKP----CDLFLH 282
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG V L++NFHLPKSTL+MLV++ G+E+ ++Y+ AI H YRFYSYGD L+
Sbjct: 283 PGNPVSHVQALLTNFHLPKSTLIMLVASMVGLEKCLELYKIAIEHHYRFYSYGDGMLIL 341
>gi|323454146|gb|EGB10016.1| hypothetical protein AURANDRAFT_12238 [Aureococcus anophagefferens]
Length = 328
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 127/352 (36%), Positives = 178/352 (50%), Gaps = 33/352 (9%)
Query: 8 FDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVI 67
+ LP S IA P PR S+RL+V ++D L + L + ++ N+++V+
Sbjct: 1 YHLPQSSIAKYPASPRGSSRLLVAADG-----ELTDSRFEALTSHLPRDALVIVNDSRVV 55
Query: 68 TAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLE 127
A+L C E+ + ++P A PS ++ +GQ+
Sbjct: 56 RARLR----CAGPDGAFEV-----LLLAPADAD--ADPSPLVAA-------RAEGQAWRA 97
Query: 128 ATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAK 186
+ E + F G L + GT P+PPY+ R D D YQT YA
Sbjct: 98 MLRRSDADGVEADVAFGGCGARTLASLLDAHGTTPVPPYLDRP--DDDGDDDAYQTAYAA 155
Query: 187 IQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGF 246
GSVAAPTAGLHFT + ++ + + VTLHVGAGTF PV V +DH MH+E
Sbjct: 156 DAGSVAAPTAGLHFTDGHFA-AVAAAFETHAVTLHVGAGTFRPV-VGRVEDHAMHAERFA 213
Query: 247 IDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG--YRFR 304
+ +AL + G +V+VGTTS R LE+ T+ +S T++ ITP +RFR
Sbjct: 214 VSRACVEALAAAARDGRPVVAVGTTSARALESLATD---ATTFSASTSLCITPDGRWRFR 270
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
AVD L++NFH P STLL LV+AF G E K +Y HA++ YRF SYGD L
Sbjct: 271 AVDHLVTNFHHPDSTLLSLVAAFVGEEPAKDLYAHALAGGYRFLSYGDACYL 322
>gi|148925938|ref|ZP_01809625.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni CG8486]
gi|145844924|gb|EDK22028.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni CG8486]
Length = 339
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 126/353 (35%), Positives = 185/353 (52%), Gaps = 31/353 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+++ +D+ L IA P P++ ARL+V I +L FL N AI
Sbjct: 5 LLLSSYDYTLANELIANYPTNPKEDARLLVFDRKNK---EIFHTTFKNLHDFL-PNCAIF 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMR-VSPNSWSVYARPSKVIKKGDILHFFS 119
FN+TKVI A++ G + +I LH ++ ++ A+ +KK +IL+F
Sbjct: 61 FNDTKVIKARIYGNK-----ASGGKIELFLHQPFLNSHNPLFLAQIKGRVKKDEILYF-- 113
Query: 120 QDGQSRLEATVIDKWNTGEILLVF-----SISGIELERQISLVGTIPLPPYIARKRPIDA 174
+ L+A V++ N G + F ++ L + +G IPLPPYI KR +
Sbjct: 114 ---KEDLKARVVELLNDGLRKVHFFQNDKTLDTSNLYNLLDKIGHIPLPPYI--KREDEK 168
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D DYQ+ +AK G+VAAPTA LHF+ +L L ++Y +TLHVGAGTF V+ E+
Sbjct: 169 SDLKDYQSIFAKNLGAVAAPTASLHFSETMLENLRKKH-EIYHLTLHVGAGTFKSVECEN 227
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
+H MHSE F + P QA + S+ I+ VGTT R +E T +GF +
Sbjct: 228 IQEHKMHSE--FFNIP-QQACEIIDSKQA-ILGVGTTVTRTIEYYTR----TKTKNGFCD 279
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
+F+ P + L++NFHLPKSTL+MLVSAF G E+ K+Y+ AI F
Sbjct: 280 LFLHPQNPPIRQNHLLTNFHLPKSTLIMLVSAFIGREQCLKLYELAIKENIAF 332
>gi|87301163|ref|ZP_01084004.1| Queuosine biosynthesis protein [Synechococcus sp. WH 5701]
gi|87284131|gb|EAQ76084.1| Queuosine biosynthesis protein [Synechococcus sp. WH 5701]
Length = 316
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/312 (35%), Positives = 163/312 (52%), Gaps = 28/312 (8%)
Query: 60 VFNNTKVITAQLNGVR-------------FCHINRREKEISCTLHMRVSPNSWSVYARPS 106
+ N+T+V+ A+L R + RE ++ S + W RP
Sbjct: 1 MVNDTRVLKARLQARRASGGAVELLVLQPYDSAAPREAAVAS------SDSCWICLVRPG 54
Query: 107 KVIKKGDILHFFSQDGQSRL--EATVIDKWNTGEILLV--FSISGIELERQISLVGTIPL 162
K ++ G++L + GQ L E +D+ + G ++ I +E + G +PL
Sbjct: 55 KRVRPGEVLQLEAA-GQPPLPLEVVALDEASGGRVIRFPPGCIDASSIEALLQRYGAMPL 113
Query: 163 PPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHV 222
PPYI D YQT YA G+VAAPTAGLH + LL + + G+ + TLHV
Sbjct: 114 PPYIQHP---DPEQESRYQTRYAARPGAVAAPTAGLHLSDELLEAIRARGVAIATATLHV 170
Query: 223 GAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE-TATT 281
G GTF P++ ED +HSE I ++ + + RGGR++++GTTS+R LE A
Sbjct: 171 GIGTFRPLEEEDLSSLDLHSEWVEISQELVDSVAACRRRGGRVIAIGTTSVRSLEGVAAL 230
Query: 282 EDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAI 341
G + P+ G N+ I PG+RF+ V L++NFHLP+S+LL+LVSA G +Y+ A
Sbjct: 231 HGGSLVPFRGPVNLVIQPGFRFQLVQGLLTNFHLPRSSLLLLVSALIGRPRLLDLYEEAK 290
Query: 342 SHAYRFYSYGDT 353
S YRF+SYGD
Sbjct: 291 SQGYRFFSYGDA 302
>gi|330895867|gb|EGH28153.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. japonica str. M301072PT]
Length = 161
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/144 (54%), Positives = 101/144 (70%), Gaps = 1/144 (0%)
Query: 213 IKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTS 272
++ FVTLHVGAGTF PV+VE +DH MHSE + A+ + ++RGGR+++VGTTS
Sbjct: 1 METAFVTLHVGAGTFQPVRVEQIEDHHMHSEWLEVGQDVVDAVTACRARGGRVIAVGTTS 60
Query: 273 LRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEE 332
+R LE+A DG + P+SG T+IFI PG F VD L++NFHLP+STLLMLVSAF G E
Sbjct: 61 VRSLESAA-RDGELKPFSGDTDIFIYPGRPFHVVDALVTNFHLPESTLLMLVSAFAGYPE 119
Query: 333 TKKMYQHAISHAYRFYSYGDTSLL 356
T Y AI H YRF+SYGD +
Sbjct: 120 TMAAYAAAIEHGYRFFSYGDAMFI 143
>gi|291276348|ref|YP_003516120.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter mustelae 12198]
gi|290963542|emb|CBG39374.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter mustelae 12198]
Length = 342
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 121/363 (33%), Positives = 190/363 (52%), Gaps = 34/363 (9%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D+ LP IA P+ ++ ARL+V + + H + L F+ + +VFN
Sbjct: 6 LQSYDYALPQELIAKYPLERKEDARLLVY--DRKSGGITHTHFDA-LFDFIPRDFTLVFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKVI A++ G + +I H + P+ V R +K G+ +HF G
Sbjct: 63 DTKVIKARIFGEK-----GSGGKIELLYHKSL-PDGALVQIRGR--VKVGEHIHF--PHG 112
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISL---VGTIPLPPYIARKRPIDARDYVD 179
S A V + G ++ F G + L +G IPLPPY+ KR ++ D +
Sbjct: 113 YS---AKVCALLDHGMRIVEFLYHGRPIRDLAPLFESIGHIPLPPYL--KRADESADEQE 167
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVY---FVTLHVGAGTFMPVKVEDTD 236
YQ+ +A G++AAPTA LHF+ R+ ++ Y FVTLHVGAGTF+ V+ ED
Sbjct: 168 YQSVFATHHGAIAAPTASLHFSP----RMRDFALQHYPHAFVTLHVGAGTFLGVESEDIR 223
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINP--WSGFTN 294
H +HSE ++ A + K +I+ +GTT+LR +E + D + + G +
Sbjct: 224 GHEIHSEELWVSAANLSLIEGAK----KILCIGTTALRSVEFLSQRDLLRQEGDYVGDCD 279
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IF+ G + L++NFHLPKS+L+MLV++ G++ K +Y AI+ YRFYSYGD
Sbjct: 280 IFLHCGNPPKKASALLTNFHLPKSSLIMLVASMVGLDTCKNLYAEAIAKKYRFYSYGDGM 339
Query: 355 LLF 357
L+
Sbjct: 340 LIL 342
>gi|224533959|ref|ZP_03674544.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi CA-11.2a]
gi|224512962|gb|EEF83328.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi CA-11.2a]
Length = 232
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 89/200 (44%), Positives = 122/200 (61%), Gaps = 5/200 (2%)
Query: 160 IPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVT 219
+PLP YI KR D D Y+T Y+K GS A+ TAGLHF+ +L S + I+ F+T
Sbjct: 31 VPLPSYI--KRDYDKIDEDRYRTIYSKYVGSAASATAGLHFSRDLFSVFENNNIEYDFIT 88
Query: 220 LHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA 279
LHVG GTF+PV+ + ++H MH E I A L + K G RI+S+ TT+LR LE++
Sbjct: 89 LHVGLGTFLPVRSKKVEEHNMHFETFLIKDFVAVRLQNAKLLGKRILSIVTTTLRALESS 148
Query: 280 TTED-GIINPWSGFTNIFITPG--YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKM 336
+ TN+FI PG Y F+ VD+L +NFH P+STLLMLVS+F G +
Sbjct: 149 YNNNLKKFKTGQQSTNLFIYPGKNYCFKFVDMLFTNFHTPQSTLLMLVSSFAGKDFVFSF 208
Query: 337 YQHAISHAYRFYSYGDTSLL 356
Y+ AI+ Y+F+SYGD L+
Sbjct: 209 YEEAINKGYKFFSYGDAMLI 228
>gi|225549313|ref|ZP_03770286.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi 94a]
gi|225370171|gb|EEG99611.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi 94a]
Length = 232
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 89/200 (44%), Positives = 122/200 (61%), Gaps = 5/200 (2%)
Query: 160 IPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVT 219
+PLP YI KR D D Y+T Y+K GS A+ TAGLHF+ +L S + I+ F+T
Sbjct: 31 VPLPSYI--KRDYDKIDEDRYRTIYSKYVGSAASATAGLHFSRDLFSVFENNNIEYDFIT 88
Query: 220 LHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA 279
LHVG GTF+PV+ + ++H MH E I A L + K G RI+S+ TT+LR LE++
Sbjct: 89 LHVGLGTFLPVRSKKVEEHNMHFETFLIKDFVAVRLQNAKLLGKRILSIVTTTLRALESS 148
Query: 280 TTED-GIINPWSGFTNIFITPG--YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKM 336
+ TN+FI PG Y F+ VD+L +NFH P+STLLMLVS+F G +
Sbjct: 149 YNNNLKEFKTGQQSTNLFIYPGKNYCFKFVDMLFTNFHTPQSTLLMLVSSFAGKDFVFSF 208
Query: 337 YQHAISHAYRFYSYGDTSLL 356
Y+ AI+ Y+F+SYGD L+
Sbjct: 209 YEEAINKGYKFFSYGDAMLI 228
>gi|327389602|gb|EGE87947.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae GA04375]
Length = 316
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/276 (38%), Positives = 148/276 (53%), Gaps = 20/276 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETG---EMQDKHFHSIIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE SL G +PLPPYI K +D R+ Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLEVLESL-GEMPLPPYIHEK--LDDRER--Y 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLL 276
HSE + A L SVK ++V V + S LL
Sbjct: 225 HSEFYQLSEEAAATLRSVK----KMVVVSSLSEPLL 256
>gi|225549768|ref|ZP_03770733.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi 118a]
gi|225369728|gb|EEG99176.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi 118a]
Length = 232
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/200 (44%), Positives = 122/200 (61%), Gaps = 5/200 (2%)
Query: 160 IPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVT 219
+PLP YI KR D D Y+T Y+K GS A+ TAGLHF+ +L S + I+ F+T
Sbjct: 31 VPLPSYI--KRDYDKIDEDRYRTIYSKYVGSAASATAGLHFSRDLFSVFENNNIEYDFIT 88
Query: 220 LHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA 279
L+VG GTF+PV+ + ++H MH E I A L + K G RI+S+ TT+LR LE++
Sbjct: 89 LNVGLGTFLPVRSKKVEEHNMHFETFLIKDFVAVRLQNAKLLGKRILSIVTTTLRALESS 148
Query: 280 TTED-GIINPWSGFTNIFITPG--YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKM 336
+ TN+FI PG Y F+ VD+L +NFH P+STLLMLVS+F G +
Sbjct: 149 YNNNLKKFKTGQQSTNLFIYPGKNYCFKFVDMLFTNFHTPQSTLLMLVSSFAGKDFVFSF 208
Query: 337 YQHAISHAYRFYSYGDTSLL 356
Y+ AI+ Y+F+SYGD L+
Sbjct: 209 YEEAINKGYKFFSYGDAMLI 228
>gi|221217423|ref|ZP_03588894.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi 72a]
gi|221192701|gb|EEE18917.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi 72a]
Length = 232
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 88/200 (44%), Positives = 121/200 (60%), Gaps = 5/200 (2%)
Query: 160 IPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVT 219
+PLP YI KR D Y+T Y+K GS A+ TAGLHF+ +L S + I+ F+T
Sbjct: 31 VPLPSYI--KRDYYKIDEDRYRTIYSKYVGSAASATAGLHFSRDLFSVFENNNIEYDFIT 88
Query: 220 LHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA 279
LHVG GTF+PV+ + ++H MH E I A L + K G RI+S+ TT+LR LE++
Sbjct: 89 LHVGLGTFLPVRSKKVEEHNMHFETFLIKDFVAVRLQNAKLLGKRILSIVTTTLRALESS 148
Query: 280 TTED-GIINPWSGFTNIFITPG--YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKM 336
+ TN+FI PG Y F+ VD+L +NFH P+STLLMLVS+F G +
Sbjct: 149 YNNNLKKFKTGQQSTNLFIYPGKNYCFKFVDMLFTNFHTPQSTLLMLVSSFAGKDFVFSF 208
Query: 337 YQHAISHAYRFYSYGDTSLL 356
Y+ AI+ Y+F+SYGD L+
Sbjct: 209 YEEAINKGYKFFSYGDAMLI 228
>gi|223889136|ref|ZP_03623725.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi 64b]
gi|223885385|gb|EEF56486.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi 64b]
Length = 232
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/200 (43%), Positives = 120/200 (60%), Gaps = 5/200 (2%)
Query: 160 IPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVT 219
+PLP YI KR D D YQT Y+K GS A+ TAGLHF+ +L S + I+ F+T
Sbjct: 31 VPLPSYI--KRDYDKIDEDRYQTIYSKYVGSAASATAGLHFSRDLFSAFENNNIEYDFIT 88
Query: 220 LHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA 279
LHVG GTF+PV+ + ++ MH E I A L + K G RI+ + TT+LR LE++
Sbjct: 89 LHVGLGTFLPVRSKKVEERNMHFETFLIKDFVAVRLQNAKLLGKRILPIVTTTLRALESS 148
Query: 280 TTED-GIINPWSGFTNIFITPG--YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKM 336
+ TN+FI PG Y F+ D+L +NFH+P+STLLMLVS+F G +
Sbjct: 149 YDNNLKKFKTGQQSTNLFIYPGKNYCFKFFDMLFTNFHIPQSTLLMLVSSFAGKDFVFSS 208
Query: 337 YQHAISHAYRFYSYGDTSLL 356
Y+ A++ Y+F+SYGD L+
Sbjct: 209 YKEAVNKGYKFFSYGDAMLI 228
>gi|145240771|ref|XP_001393032.1| hypothetical protein ANI_1_2304074 [Aspergillus niger CBS 513.88]
gi|134077556|emb|CAK96700.1| unnamed protein product [Aspergillus niger]
Length = 356
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 113/380 (29%), Positives = 193/380 (50%), Gaps = 49/380 (12%)
Query: 1 MMVKEFDFDL-----PPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNS 55
M EF+FDL P + LR RDS +++V+ S I + S + +
Sbjct: 1 MKTAEFEFDLDYKVMPHDPVELRGK-TRDSGKMIVLDRESSK---IDHAIFSSIGEYFRP 56
Query: 56 NDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSV--YARPSKVIKKGD 113
D +V N++ +++ N + F H N+ +++ H P+ ++ +P K+
Sbjct: 57 GDLLVLNDSYMLS---NTLWFEHGNKDSLQLTVYGH---EPDGTTIVELKKPEVTFKRAQ 110
Query: 114 ILHFFSQDGQSRLEATVIDK-----WNTG----EILL-VFSISGIELERQISLVGTIPLP 163
L ++ +L+ T++D+ W E+LL G L+ I L
Sbjct: 111 TLTSLDEE---KLKCTLLDQQPDKLWKVQFTPTELLLPTLDQYGARLDENIHL------N 161
Query: 164 PYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVG 223
P +++P DA Y++ YAK GS+ P+AGLHF+ LL+ + + G+++ ++TLHVG
Sbjct: 162 PTYWKEKP-DA-----YRSVYAKKPGSLEIPSAGLHFSHELLAEISAKGVEIAYITLHVG 215
Query: 224 AGTFMPVK---VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT 280
A + V+ VE+ + H + SE + T+ LN +S G R+++VGTT +R LET T
Sbjct: 216 ATEILSVRHISVEEIEKHKVRSEYYEVSERTSAQLNRARSEGRRVIAVGTTVMRTLETIT 275
Query: 281 TE---DGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMY 337
E G I P G+T+++I PG+ F AVD+L++N H P+S+ ++L +AF G + + Y
Sbjct: 276 RETGRKGTIKPQHGWTDLYIYPGFEFNAVDVLLTNLHRPRSSHIVLTAAFAGTDFVMRSY 335
Query: 338 QHAISHA-YRFYSYGDTSLL 356
+ Y F +GD L+
Sbjct: 336 KEIQEKGDYEFDMFGDCMLI 355
>gi|213420137|ref|ZP_03353203.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
Length = 272
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/281 (38%), Positives = 150/281 (53%), Gaps = 17/281 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P R RL+ +L P H +DL LN D +
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLL----SLEGPTGALTHGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFNNT+VI A+L G + +I + + + R SK K G
Sbjct: 57 VFNNTRVIPARLFGRKASG-----GKIEVLVERMLDDKRILAHIRASKAPKPG--TELLL 109
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
D +S + AT+ + G + V + ++ +G +PLPPYI RP + D
Sbjct: 110 GDDES-IHATMTARH--GALFEVEFNDPRPVLDILNAIGHMPLPPYI--DRPDEDADREL 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y++ G+VAAPTAGLHF LL+ L G+++ FVTLHVGAGTF PV+V+ +DHI
Sbjct: 165 YQTVYSEKPGAVAAPTAGLHFDEPLLAALREKGVEMAFVTLHVGAGTFQPVRVDTIEDHI 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT 280
MHSE + A+ + K+RG R+++VGTTS+R LE+A
Sbjct: 225 MHSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAA 265
>gi|218512464|ref|ZP_03509304.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhizobium
etli 8C-3]
Length = 169
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 76/154 (49%), Positives = 99/154 (64%), Gaps = 6/154 (3%)
Query: 40 VISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSW 99
+SDH V DLP+FL + DA+VFN+TKVI AQL G+R +++S TLHMR+ P+ W
Sbjct: 14 ALSDHHVYDLPSFLRAGDALVFNDTKVIPAQLEGIRH-RDGAGGQQVSATLHMRIGPSRW 72
Query: 100 SVYARPSKVIKKGDILHFFSQDGQS----RLEATVIDKWNTGEILLVFSISGIELERQIS 155
+A+P K IK+GD + F G+S L+ATV +K GE+ L F ++G L+ I+
Sbjct: 73 KAFAKPGKRIKEGDRI-AFGHSGESCFLGALDATVEEKGEAGEVTLAFDLTGPALDEAIA 131
Query: 156 LVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQG 189
VG IPLPPYIA KRP D RD DYQT YA G
Sbjct: 132 AVGHIPLPPYIAAKRPEDERDRADYQTIYAPRGG 165
>gi|167895801|ref|ZP_02483203.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 7894]
Length = 267
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/280 (35%), Positives = 147/280 (52%), Gaps = 17/280 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
+ + +FDFDLPP IA + R ++RL+ V + N S P + D ++LPA + D +
Sbjct: 2 LTLSDFDFDLPPELIAQTALPERSASRLLEVDNTNPSAPPRLVDRRFAELPACVAPGDLL 61
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFN+TKV+ A+ G + +I + + R SK G L
Sbjct: 62 VFNDTKVLKARFFGRKASG-----GKIEVLIERVTGERTALAQIRASKSPPPGTTLTLAD 116
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ TV ++ L + +ER G +PLPPYI + DA D
Sbjct: 117 A-----FDVTVGERVEPFFTLHFPDDCLVLIERH----GRLPLPPYI--EHAPDAADETR 165
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H
Sbjct: 166 YQTVFAANPGAVAAPTAGLHFDDAVLAALEARGVERATLTLHVGAGTFQPVRVENLAEHR 225
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA 279
MHSE + + + + ++RGGR+++VGTTS+R LE A
Sbjct: 226 MHSESYELTDALVEKIAATRARGGRVIAVGTTSMRALEAA 265
>gi|167721138|ref|ZP_02404374.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei DM98]
Length = 301
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/283 (35%), Positives = 147/283 (51%), Gaps = 17/283 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
+ + +FDFDLPP IA + R ++RL+ V + N S P + D ++LPA + D +
Sbjct: 2 LTLSDFDFDLPPELIAQTALPERSASRLLEVDNTNPSAPPRLVDRRFAELPACVAPGDLL 61
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFN+TKV+ A RF +I + + R SK G L
Sbjct: 62 VFNDTKVLKA-----RFFGRKASGGKIEVLIERVTGERTALAQIRASKSPPPGTTLTLAD 116
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ TV ++ L + +ER G +PLPPYI + DA D
Sbjct: 117 A-----FDVTVGERVEPFFTLHFPDDCLVLIERH----GRLPLPPYI--EHAPDAADETR 165
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H
Sbjct: 166 YQTVFAANPGAVAAPTAGLHFDDAVLTALEARGVERATLTLHVGAGTFQPVRVENLAEHR 225
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE 282
MHSE + + + + ++RGGR+++VGTTS+R LE A +
Sbjct: 226 MHSESYELTDALVEKIAATRARGGRVIAVGTTSMRALEAAARD 268
>gi|149181032|ref|ZP_01859533.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase, queuosine
biosynthesis protein QueA [Bacillus sp. SG-1]
gi|148851316|gb|EDL65465.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase, queuosine
biosynthesis protein QueA [Bacillus sp. SG-1]
Length = 343
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 172/358 (48%), Gaps = 30/358 (8%)
Query: 8 FDLPPSRIALRPV----FPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNN 63
F++P S A P RD RLMV++ I S LP F+ D +VFNN
Sbjct: 8 FEIPQSLNAKVPAEQRGAGRDDVRLMVMNGE-----EIHHERFSSLPDFMEEGDLLVFNN 62
Query: 64 TKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQ 123
++ I A L G + C+ +E+ L ++ W + GD L +
Sbjct: 63 SRTIPAVLKG-KACN-----REMEIRLSRQLDDQRWEALIW-GGLFSAGDELEL-----K 110
Query: 124 SRLEATVIDKWNTGEILLV-FSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ ++A + N ++ + FSI G++L I G YI +D YQT
Sbjct: 111 NGVKAVITGTGNEKPLVTIDFSIGGVDLIDYIYSYGEPIRYEYIDSPWTLDV-----YQT 165
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA + GSV +AG F+ + +L G++ F+TLH G + + + H
Sbjct: 166 AYASVPGSVEMASAGRAFSWRMFEKLKEKGVRTAFLTLHTGLSYYGNDRWPNPQKH---P 222
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I TA+ +N+V+ + GR+++VGTT +R LETA E G ++ G TN++I Y+
Sbjct: 223 EAFHIPEETAKLINAVREKKGRVIAVGTTVVRALETAVDEKGYVSASKGITNLYIQKDYQ 282
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
+A+D L++ H P++T L +++AF Y+ A+ Y ++ +GD +L+F +R
Sbjct: 283 LKAIDGLVTGLHEPEATHLEMLAAFTYEHHLFDAYRQALKKGYLWHEFGDMNLIFAER 340
>gi|167817319|ref|ZP_02448999.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 91]
Length = 266
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/280 (35%), Positives = 146/280 (52%), Gaps = 17/280 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
+ + +FDFDLPP IA + R ++RL+ V + N S P + D ++LPA + D +
Sbjct: 2 LTLSDFDFDLPPELIAQTALPERSASRLLEVDNTNPSAPPRLVDRRFAELPACVAPGDLL 61
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFN+TKV+ A RF +I + + R SK G L
Sbjct: 62 VFNDTKVLKA-----RFFGRKASGGKIEVLIERVTGERTALAQIRASKSPPPGTTLTL-- 114
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ TV ++ L + +ER G +PLPPYI + DA D
Sbjct: 115 ---ADAFDVTVGERVEPFFTLHFPDDCLVLIERH----GRLPLPPYI--EHAPDAADETR 165
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H
Sbjct: 166 YQTVFAANPGAVAAPTAGLHFDDAVLTALEARGVERATLTLHVGAGTFQPVRVENLAEHR 225
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA 279
MHSE + + + + ++RGGR+++VGTTS+R LE A
Sbjct: 226 MHSESYELTDALVEKIAATRARGGRVIAVGTTSMRALEAA 265
>gi|167904189|ref|ZP_02491394.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei NCTC 13177]
Length = 267
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/280 (35%), Positives = 146/280 (52%), Gaps = 17/280 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
+ + +FDFDLPP IA + R ++RL+ V + N S P + D ++LPA + D +
Sbjct: 2 LTLSDFDFDLPPELIAQTALPERSASRLLEVDNTNPSAPPRLVDRRFAELPACVAPGDLL 61
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFN+TKV+ A RF +I + + R SK G L
Sbjct: 62 VFNDTKVLKA-----RFFGRKASGGKIEVLIERVTGERTALAQIRASKSPPPGTTLTL-- 114
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ TV ++ L + +ER G +PLPPYI + DA D
Sbjct: 115 ---ADAFDVTVGERVEPFFTLHFPDNCLVLIERH----GRLPLPPYI--EHAPDAADETR 165
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H
Sbjct: 166 YQTVFAANPGAVAAPTAGLHFDDAVLTALEARGVERATLTLHVGAGTFQPVRVENLAEHR 225
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA 279
MHSE + + + + ++RGGR+++VGTTS+R LE A
Sbjct: 226 MHSESYELTDALVEKIAATRARGGRVIAVGTTSMRALEAA 265
>gi|255031026|ref|ZP_05302977.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes LO28]
Length = 149
Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 74/145 (51%), Positives = 100/145 (68%), Gaps = 5/145 (3%)
Query: 154 ISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGI 213
+ +G +PLPPYI + R YQT YAK GS AAPTAGLHFT +LL ++ + G+
Sbjct: 9 LEQLGEMPLPPYIKEQLADQDR----YQTVYAKENGSAAAPTAGLHFTEDLLEQISAKGV 64
Query: 214 KVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSL 273
++ FVTLHVG GTF PV VEDT +H MHSE + +A+ +N +K++GG++V+VGTTS+
Sbjct: 65 EIIFVTLHVGLGTFRPVDVEDTTNHKMHSEFYRLTEESAERINKIKAQGGKVVAVGTTSI 124
Query: 274 RLLET-ATTEDGIINPWSGFTNIFI 297
R LET A+ DG + SG+T IFI
Sbjct: 125 RTLETIASRHDGKLVAESGWTEIFI 149
>gi|229814959|ref|ZP_04445297.1| hypothetical protein COLINT_02002 [Collinsella intestinalis DSM
13280]
gi|229809446|gb|EEP45210.1| hypothetical protein COLINT_02002 [Collinsella intestinalis DSM
13280]
Length = 298
Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 99/300 (33%), Positives = 147/300 (49%), Gaps = 46/300 (15%)
Query: 99 WSVYARPSKVIKKGDILHFFS------QDGQSRLEATVID--KWNTGEILLVFSISGIE- 149
W P K +K G+++ + + + L A ++D + G L+ F G
Sbjct: 2 WECLVNPGKRLKPGNVVEYRAGGLLAPEGAPVVLTAEILDFIDDSKGGRLVRFEPVGENE 61
Query: 150 ------LERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYA-KIQGSVAAPTAGLHFTS 202
L+ I G +PLPPYI D YQT YA + S AAPTAGLHFT
Sbjct: 62 GGVPRTLDEAIHAAGHVPLPPYITGYE----GDPEKYQTVYAMSEEHSAAAPTAGLHFTP 117
Query: 203 NLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRG 262
L+ R+ G V L VG TF V+ +D +H+MH+E + A +A+++ K+ G
Sbjct: 118 ELIQRIKDKGCGWATVELEVGIDTFRLVEEDDPTEHVMHTERYHVPAEVVEAVHATKAAG 177
Query: 263 GRIVSVGTTSLRLLETA------------------TTEDG--------IINPWSGFTNIF 296
R+++VGTT++R LE+A EDG I TN++
Sbjct: 178 HRVIAVGTTAVRSLESAWDAAAPASDPAVTARGFEGREDGADVRGEGDITVREDATTNLY 237
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ PG F VD L++NFH+P+STL+MLVSA ++ Y+ A+ YRF+S+GD L+
Sbjct: 238 LMPGSTFHVVDALITNFHVPRSTLMMLVSALATRDQIIDAYEEAVREKYRFFSFGDAMLI 297
>gi|167920403|ref|ZP_02507494.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei BCC215]
Length = 273
Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 99/278 (35%), Positives = 145/278 (52%), Gaps = 17/278 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
+ + +FDFDLPP IA + R ++RL+ V + N S P + D ++LPA + D +
Sbjct: 2 LTLSDFDFDLPPELIAQTALPERSASRLLEVDNTNPSAPPRLVDRRFAELPACVAPGDLL 61
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFN+TKV+ A RF +I + + R SK G L
Sbjct: 62 VFNDTKVLKA-----RFFGRKASGGKIEVLIERVTGERTALAQIRASKSPPPGTTLTLAD 116
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ TV ++ L + +ER G +PLPPYI + DA D
Sbjct: 117 A-----FDVTVGERVEPFFTLHFPDDCLVLIERH----GRLPLPPYI--EHAPDAADETR 165
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H
Sbjct: 166 YQTVFAANPGAVAAPTAGLHFDDAVLTALEARGVERATLTLHVGAGTFQPVRVENLAEHR 225
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE 277
MHSE + + + + ++RGGR+++VGTTS+R LE
Sbjct: 226 MHSESYELTDALVEKIAATRARGGRVIAVGTTSMRALE 263
>gi|145631080|ref|ZP_01786855.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae R3021]
gi|144983365|gb|EDJ90847.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae R3021]
Length = 267
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/264 (35%), Positives = 139/264 (52%), Gaps = 13/264 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R S RL+ ++ I SD+ ++ D ++
Sbjct: 1 MRVSDFNFDLPDELIARYPKTDRVSCRLLQLNGENG---EIFHRTFSDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + + R SK K+G L F +
Sbjct: 58 FNNTRVIPARMFGRK-----ASGGKIEVLVERMLDEHRFLAHIRSSKSPKEGAEL-FLGE 111
Query: 121 D--GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
D G++ V+ ++ + S L + +G +PLPPYI RP + D
Sbjct: 112 DKLGENNGIKAVMKARHSSLFEVELSDKSTALLDVLQTIGHMPLPPYI--DRPDEEADKE 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y+K+ G+VAAPTAGLHF NLL +L + G+ FVTLHVGAGTF PV+VE+ +DH
Sbjct: 170 CYQTVYSKVPGAVAAPTAGLHFDENLLEKLKAKGVNFEFVTLHVGAGTFQPVRVENIEDH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRG 262
+MH+E + A+ + K G
Sbjct: 230 VMHAEYVEVSQEVCNAIIATKKSG 253
>gi|167822431|ref|ZP_02453902.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 9]
Length = 262
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/277 (35%), Positives = 144/277 (51%), Gaps = 17/277 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
+ + +FDFDLPP IA + R ++RL+ V + N S P + D ++LPA + D +
Sbjct: 2 LTLSDFDFDLPPELIAQTALPERSASRLLEVDNTNPSAPPRLVDRRFAELPACVAPGDLL 61
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFN+TKV+ A RF +I + + R SK G L
Sbjct: 62 VFNDTKVLKA-----RFFGRKASGGKIEVLIERVTGERTALAQIRASKSPPPGTTLTL-- 114
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ TV ++ L + +ER G +PLPPYI + DA D
Sbjct: 115 ---ADAFDVTVGERVEPFFTLHFPDDCLVLIERH----GRLPLPPYI--EHAPDAADETR 165
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H
Sbjct: 166 YQTVFAANPGAVAAPTAGLHFDDAVLAALEARGVERATLTLHVGAGTFQPVRVENLAEHR 225
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLL 276
MHSE + + + + ++RGGR+++VGTTS+R L
Sbjct: 226 MHSESYELTDALVEKIAATRARGGRVIAVGTTSMRAL 262
>gi|167912448|ref|ZP_02499539.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 112]
Length = 262
Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/277 (35%), Positives = 144/277 (51%), Gaps = 17/277 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
+ + +FDFDLPP IA + R ++RL+ V + N S P + D ++LPA + D +
Sbjct: 2 LTLSDFDFDLPPELIAQTALPERSASRLLEVDNTNPSAPPRLVDRRFAELPACVAPGDLL 61
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFN+TKV+ A RF +I + + R SK G L
Sbjct: 62 VFNDTKVLKA-----RFFGRKASGGKIEVLIERVTGERTALAQIRASKSPPPGTTLTL-- 114
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ TV ++ L + +ER G +PLPPYI + DA D
Sbjct: 115 ---ADAFDVTVGERVEPFFTLHFPDDCLVLIERH----GRLPLPPYI--EHAPDAADETR 165
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H
Sbjct: 166 YQTVFAANPGAVAAPTAGLHFDDAVLTALEARGVERATLTLHVGAGTFQPVRVENLAEHR 225
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLL 276
MHSE + + + + ++RGGR+++VGTTS+R L
Sbjct: 226 MHSESYELTDALVEKIAATRARGGRVIAVGTTSMRAL 262
>gi|219685368|ref|ZP_03540187.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
garinii Far04]
gi|219673141|gb|EED30161.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
garinii Far04]
Length = 258
Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 97/278 (34%), Positives = 147/278 (52%), Gaps = 25/278 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF F+LP S IA P R S+RLMV+ P L + ++ V+++ ++NS+ I+
Sbjct: 1 MKTKEFHFNLPCSLIAQYPSEKRGSSRLMVLDPKLQK--IYHENSVNNILKYINSDTFII 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHM----RVSPNSWSVYARPSKVIKKGDILH 116
FNN+KV +++ E E+ + R+ + ++ SK G++
Sbjct: 59 FNNSKVRKSRMYA---------ESEMGNNIEFLILDRIGTDLFTALISKSKKQIVGNVYK 109
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
F L ++ K N EI+L F + ++ E G +P+PPYI KR D D
Sbjct: 110 F-----PEGLMGEILSK-NNSEIVLKFD-NNVD-EDYFEKHGFVPIPPYI--KRDYDKID 159
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT Y+K GS A+ TAGLHF+ +L S I+ F+TLHVG GTF+PV+ + +
Sbjct: 160 EDRYQTVYSKYVGSAASATAGLHFSRDLFSAFEKNNIEYDFITLHVGLGTFLPVRSKKVE 219
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLR 274
+H MH E I+ A L + K G +I+S+GTT+LR
Sbjct: 220 EHNMHFETFLIENSVAARLENAKFLGKKILSIGTTTLR 257
>gi|56964908|ref|YP_176639.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase, queuosine
biosynthesis protein QueA [Bacillus clausii KSM-K16]
gi|56911151|dbj|BAD65678.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase, queuosine
biosynthesis protein QueA [Bacillus clausii KSM-K16]
Length = 332
Score = 142 bits (358), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 112/359 (31%), Positives = 175/359 (48%), Gaps = 39/359 (10%)
Query: 4 KEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNN 63
K D D PP + RD RL+ + S +V S L L + D +VFNN
Sbjct: 7 KRLDADTPPEKRGQM----RDGVRLLTYWSD-SGRIVHGG--FSQLAHQLEAGDVLVFNN 59
Query: 64 TKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWS--VYARPSKVIKKGDILHFFSQD 121
++ I A+L V I L V +W + SK K + +H
Sbjct: 60 SRTIPAELKTV---------DGIRVRLSREVEDGTWDGLILGESSK---KLEFMHG---- 103
Query: 122 GQSRLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L+A V ++ LVFS S L R++ G + ++AR P+ DY
Sbjct: 104 ----LKALVTGPGTEPPLVRLVFSCSSSRLLRELYRQGDVIRYEHVARSWPLQ-----DY 154
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA I GSV P+AG FT +L+ L GI++ FVTLH G + K + +
Sbjct: 155 QTVYASIPGSVEMPSAGRAFTWRMLAHLQKHGIRLAFVTLHAGLSYYGDDKWPNP---AL 211
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I+ A +N K+ GGR+++VGTT +R LETA+ + II P +G T+++++
Sbjct: 212 HPEAFSIEDEQAAIINDAKANGGRVIAVGTTVVRALETASDGNTII-PQAGVTSLYLSRT 270
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
+ AVD L++ FH +++ + L+ F G E K +Y+ A++ Y ++ +GD +LL ++
Sbjct: 271 SKLTAVDGLLTGFHEQEASHIDLLQTFAGEEGVKAIYKEAVAKRYLWHEFGDMNLLMRQ 329
>gi|256394335|ref|YP_003115899.1| Queuosine biosynthesis protein [Catenulispora acidiphila DSM 44928]
gi|256360561|gb|ACU74058.1| Queuosine biosynthesis protein [Catenulispora acidiphila DSM 44928]
Length = 385
Score = 139 bits (350), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 175/352 (49%), Gaps = 31/352 (8%)
Query: 23 RDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRR 82
RD RL+V + ++ ++ SDLP L D +V NN+ + A L+ V R
Sbjct: 50 RDGVRLLVARGRGADDPEVAHYVFSDLPDVLEPGDLLVVNNSGTLPAALDAVDPDSGTRV 109
Query: 83 EKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF----SQDGQS------RLEAT--- 129
+S P++W V R + + G F SQD S RL T
Sbjct: 110 VLHVSTGTPQ--DPDAWIVELR--RPMADGSTRPFALGPDSQDPDSPATPGLRLRVTGGA 165
Query: 130 --VIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKI 187
+ + T + + G+ + ++ G Y+ R PI A YQT +A I
Sbjct: 166 TVTLLRPYTRRLWVARLDLGMSVADYLTRHGRAIRYDYVDRDWPITA-----YQTVFAAI 220
Query: 188 QGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFI 247
GS P+A F++++++RL++ G+ + +TLH G + P E ++E +
Sbjct: 221 PGSAEMPSAARPFSTDVVARLVAKGVYIAPITLHTGVAS--PEAHEKP-----YAEWYSV 273
Query: 248 DAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVD 307
TA+ +N V++RGGR++++GTT++R LE+ E+G ++P G+T + ITP RAVD
Sbjct: 274 PEATAELVNHVRARGGRVIAIGTTAVRALESVADEEGTVHPGQGWTELIITPQRGVRAVD 333
Query: 308 ILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
L++ FH P+++ L++++A G + Y A++ Y ++ +GD +LL ++
Sbjct: 334 GLLTGFHEPEASHLLMLTAIAGPRLIRASYDAALAARYLWHEFGDVNLLLRR 385
>gi|167837801|ref|ZP_02464684.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia thailandensis MSMB43]
Length = 253
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/269 (35%), Positives = 138/269 (51%), Gaps = 17/269 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FDFDLPP IA + R ++RL+ V N S P + D ++LPA + D +V
Sbjct: 2 LTLSDFDFDLPPELIAQTALPERSASRLLEVD-NTSAPPRLVDRRFAELPACVAPGDLLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKV+ A RF +I + P + R SK G L
Sbjct: 61 FNDTKVLKA-----RFFGHKASGGKIEVLIERVTGPRTALAQIRASKSPAPGTTLTL--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ TV ++ L F + L I G +PLPPYI + DA D Y
Sbjct: 113 --ADAFDVTVGERAEPF-FTLHFPDDCLAL---IERHGRLPLPPYI--EHTPDATDETRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H M
Sbjct: 165 QTVFAANPGAVAAPTAGLHFDDAVLAALDARGVERATLTLHVGAGTFQPVRVENIAEHRM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVG 269
HSE + + + + ++RGGR+++VG
Sbjct: 225 HSESYELTGALVEKIAATRARGGRVIAVG 253
>gi|108805409|ref|YP_645346.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rubrobacter xylanophilus DSM 9941]
gi|108766652|gb|ABG05534.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rubrobacter xylanophilus DSM 9941]
Length = 365
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 108/375 (28%), Positives = 166/375 (44%), Gaps = 52/375 (13%)
Query: 6 FDFDLPPSRIALRPV----FPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
DF LPP A P RD+ RLMV P ++ DLP FL D +V
Sbjct: 20 MDFRLPPELEASEPPEARGLERDAVRLMVSRPGGG----VAHARFRDLPRFLEPGDLLVV 75
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHM--RVSPNSWSVYAR--------PSKVIKK 111
N + + A L+ RRE L + R+ W+V R P
Sbjct: 76 NTSGTMKAALDA-------RREDGAPLELRLSTRLPAGLWTVELRRPAGGATEPFGGASA 128
Query: 112 GDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIAR-KR 170
G++L G++ L A + G ++ ++L PL Y+ R R
Sbjct: 129 GEVLRL-PGSGRAALHARY--RHAGGAESPRLWVATLDL--------PAPLGEYLERHGR 177
Query: 171 PIDARDYVD-------YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVG 223
PI YV Y+T YA GS P+AG FT +++RL++ G++V + LH G
Sbjct: 178 PIRY-GYVGEEWPIGYYRTAYATEDGSAEMPSAGRAFTPEVITRLVARGVQVAPLVLHTG 236
Query: 224 AGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED 283
+ D + E + TA+ N + GGR+V+VGTT +R LET +
Sbjct: 237 VSSL-------ESDEPPYEEFYRVPPETARLANMAREAGGRVVAVGTTVVRALETVSDGR 289
Query: 284 GIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISH 343
G+++P G+T + +TP RAVD L++ H P+S+ L ++ A G E + Y A+
Sbjct: 290 GVVHPGEGWTGLVVTPERGVRAVDALVTGLHEPRSSHLAMLEAVAGREHLRLAYDEALKE 349
Query: 344 AYRFYSYGDTSLLFQ 358
Y ++ +GD L+ +
Sbjct: 350 RYLWHEFGDLHLILR 364
>gi|237756796|ref|ZP_04585286.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sulfurihydrogenibium yellowstonense SS-5]
gi|237691048|gb|EEP60166.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sulfurihydrogenibium yellowstonense SS-5]
Length = 147
Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 87/145 (60%), Gaps = 4/145 (2%)
Query: 212 GIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTT 271
G+ + ++TLHVG GTF PVK ED H MH E I T + + K +V+VGTT
Sbjct: 6 GVNIAYITLHVGLGTFKPVKTEDITKHKMHEEYFTIPKETLEMIKKTKENKKSVVAVGTT 65
Query: 272 SLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIE 331
+R LET G GFT+IFI P Y F+ VD L++NFHLPKSTLLMLVSAF +
Sbjct: 66 VVRALETY----GKFGKTEGFTDIFIYPPYEFKIVDKLITNFHLPKSTLLMLVSAFADRD 121
Query: 332 ETKKMYQHAISHAYRFYSYGDTSLL 356
K Y A+ YRF+SYGD L+
Sbjct: 122 FILKAYNEAVKERYRFFSYGDAMLI 146
>gi|297564544|ref|YP_003683516.1| Queuosine biosynthesis protein [Meiothermus silvanus DSM 9946]
gi|296848993|gb|ADH62008.1| Queuosine biosynthesis protein [Meiothermus silvanus DSM 9946]
Length = 362
Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 168/380 (44%), Gaps = 42/380 (11%)
Query: 1 MMVKE--FDFDLPPSRIALRPV----FPRDSARLMVVHPNLSCPLVISDHLV----SDLP 50
M +KE DF LP A P RD RLMV + + SD LV ++P
Sbjct: 1 MTLKEPSLDFVLPAELEAREPPEARGLERDQVRLMVSYRS-------SDRLVHTQFREIP 53
Query: 51 AFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYAR-----P 105
L + D +V N + + A L R KE+ L R+ W+V R
Sbjct: 54 QHLRAGDVLVINTSGTLPAALPATR-----EDGKELRLHLSSRLPGGLWTVELRRVEEGA 108
Query: 106 SKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLP-P 164
SK +G G++ + K E + G L R + P P P
Sbjct: 109 SKPFSEGQAGETLRLPGRASVRLLTRYKLQPSETQVPTPSQGKTLSRLWIATFSFPDPIP 168
Query: 165 YIARKRPIDARDYVD-------YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYF 217
Y+ YV YQ+ Y GS P+AG FT+ +++RL++ G++V
Sbjct: 169 YLLEHGQPIRYGYVPRSWPLEFYQSVYTTEMGSAEMPSAGRAFTAEIITRLVAQGVQVAP 228
Query: 218 VTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE 277
+ LH G + D + E + TA+A+N ++ G R+++VGTT +R LE
Sbjct: 229 LLLHTGVASL-------EDHEPPYEEFYRVPPETARAVNQARADGRRVIAVGTTVVRALE 281
Query: 278 TATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMY 337
T T G+++P G+T + ITP RAVD +++ +H PK+T LM++ A G E Y
Sbjct: 282 TVTDVYGVVHPGEGWTQLVITPQRGVRAVDGILTGWHEPKATHLMMLEAIAGREPLAVAY 341
Query: 338 QHAISHAYRFYSYGDTSLLF 357
+ A+ Y ++ +GD L+
Sbjct: 342 RAALERRYLWHEFGDLHLIL 361
>gi|115399122|ref|XP_001215150.1| predicted protein [Aspergillus terreus NIH2624]
gi|114192033|gb|EAU33733.1| predicted protein [Aspergillus terreus NIH2624]
Length = 375
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 184/374 (49%), Gaps = 46/374 (12%)
Query: 1 MMVKEFDFDLPPSRIALRPVF----PRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSN 56
M EF+FDL + P RDS R++V+ + + I + S + +
Sbjct: 1 MKTAEFEFDLDSQIMPHDPAEVRGKSRDSGRMIVLDRSAA---KIEHSVFSSIVDYFRPG 57
Query: 57 DAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARP-SKVIKKGDIL 115
D +V N++ +++ N + F H N + + T++ + V R + +K G L
Sbjct: 58 DVLVLNDSYMLS---NTLWFEHGN---ESVQVTVYGHEPDGTTIVDIRSDQQWVKSGLTL 111
Query: 116 HFFSQDGQSRLEATVID---------KWNTGEILL-VFSISGIELERQISLVGTIPLPPY 165
+ D +L T+++ K++ E+L+ G L+ TI L P
Sbjct: 112 AAMNND---QLTCTLLEQQPDRLWKAKFSPPELLVPTLDQHGQRLDE------TIHLNPT 162
Query: 166 IARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAG 225
+ P Y++ YAK GS+ P+AGLHF+ LL+++ S G+++ ++TLHVGA
Sbjct: 163 TWKSMP------EAYRSVYAKKAGSLEIPSAGLHFSDALLAQIQSKGVEIAYITLHVGAT 216
Query: 226 TFMPVK---VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE 282
+ V+ E+ ++H + SE + TA +N + G R+++VGTT +R LE+
Sbjct: 217 EVLSVRHISEEEIENHKVRSEYFEVADRTAAQINRARVEGRRVIAVGTTVMRTLESLALG 276
Query: 283 DG---IINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQH 339
G I P G+T+++I PG++F VD+L++N H P+S+ ++L +AF G + + Y
Sbjct: 277 KGRKAAIQPQDGWTDLYIYPGFKFNVVDVLLTNLHRPRSSHIVLTAAFAGKDLVMRSYDE 336
Query: 340 AISH-AYRFYSYGD 352
H Y F +GD
Sbjct: 337 IAEHGGYEFDMFGD 350
>gi|224532557|ref|ZP_03673180.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi WI91-23]
gi|224512500|gb|EEF82878.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi WI91-23]
Length = 272
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/280 (35%), Positives = 148/280 (52%), Gaps = 27/280 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF F+LP S IA P R S+RLMV+ P L + ++ V+++ ++NSN I+
Sbjct: 1 MKTKEFHFNLPHSLIAQYPSEKRGSSRLMVLDPQLQK--IYHENSVNNILKYINSNIFII 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHM--RVSPNSWSVYARPSKVIKKGDILHFF 118
FNN+KV +++ E E+S + R+ N ++ SK G+ F
Sbjct: 59 FNNSKVRKSRI---------YVESEMSSNFLILDRIDTNLFTALVSKSKKQIIGNFYKF- 108
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFS--ISGIELERQISLVGTIPLPPYIARKRPIDARD 176
+G L ++ K N+ E++L F+ + E+ +PLP YI KR D D
Sbjct: 109 -PEG---LMGEILSK-NSSEVVLKFNNDVGEDYFEKHC----FVPLPSYI--KRDYDKID 157
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
Y+T Y+K GS A+ TAGLHF+ +L S + I+ F+TLHVG GTF+PV+ + +
Sbjct: 158 EDRYRTIYSKYVGSAASATAGLHFSIDLFSVFENNNIEYDFITLHVGLGTFLPVRSKKVE 217
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLL 276
+H MH E I A L + K G RI+S+ TT+LR L
Sbjct: 218 EHDMHFETFLIKDFVAVRLQNAKLLGKRILSIVTTTLRFL 257
>gi|330937012|gb|EGH41104.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. pisi str. 1704B]
Length = 243
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/273 (36%), Positives = 136/273 (49%), Gaps = 41/273 (15%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R S+RL+ L P ++ +DL L D +
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLL----TLDGPTGALAHRQFTDLLEHLRPGDLM 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDIL-HFF 118
VFNNT+VI A+L G +K L + V +V+ +L H
Sbjct: 57 VFNNTRVIPARLFG---------QKASGGKLEILVE-----------RVLDSHRVLAHVR 96
Query: 119 SQDGQSRLEATVIDKWNTGEILL----VFSISGIE-----LERQISLVGTIPLPPYIARK 169
S + +ID E++ +F + E LER VG +PLPPYI
Sbjct: 97 SSKSPKPGSSILIDGGGEAEMVARHDALFELRFAEEVLPLLER----VGHMPLPPYI--D 150
Query: 170 RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
RP + D YQT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF P
Sbjct: 151 RPDEGADRERYQTVYAQRAGAVAAPTAGLHFDQPLLEAIAAKGVETAFVTLHVGAGTFQP 210
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRG 262
V+VE +DH MHSE + A+ + ++RG
Sbjct: 211 VRVEQIEDHHMHSEWLEVGQDVVDAVAACRARG 243
>gi|218672577|ref|ZP_03522246.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhizobium
etli GR56]
Length = 134
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/137 (52%), Positives = 90/137 (65%), Gaps = 8/137 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRP PRDSARL+VV PN L SDH V DLP+FL + DA+V
Sbjct: 1 MRVDLFDFDLPDERIALRPAEPRDSARLLVVDPNAESAL--SDHHVCDLPSFLRAGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R +++S TLHMR+ P+ W +A+P K IK+GD + F
Sbjct: 59 FNDTKVIPAQLEGIRH-RDGAGGQQMSATLHMRIGPSRWKAFAKPGKRIKEGDRI-AFGH 116
Query: 121 DGQS----RLEATVIDK 133
G+S L+ATV +K
Sbjct: 117 SGESCMIGSLDATVEEK 133
>gi|34763571|ref|ZP_00144506.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium nucleatum subsp. vincentii ATCC 49256]
gi|27886760|gb|EAA23898.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium nucleatum subsp. vincentii ATCC 49256]
Length = 143
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 90/136 (66%)
Query: 222 VGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT 281
VG GTF PV+ E+ +H MH E I A+ +N K+ G RI+SVGTT+ R LE++
Sbjct: 8 VGLGTFRPVQTENVLEHKMHEESFEISEKAAKIINEAKTEGRRIISVGTTATRALESSVD 67
Query: 282 EDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAI 341
++G + T+IFI PGY+F+ VD L++NFHLPKSTLLMLVSAF E+ ++Y A+
Sbjct: 68 KNGKLIVQKKDTDIFIYPGYKFKIVDALITNFHLPKSTLLMLVSAFYDREKMLEIYNLAV 127
Query: 342 SHAYRFYSYGDTSLLF 357
Y F+S+GD+ ++
Sbjct: 128 KEKYHFFSFGDSMFIY 143
>gi|298250612|ref|ZP_06974416.1| Queuosine biosynthesis protein [Ktedonobacter racemifer DSM 44963]
gi|297548616|gb|EFH82483.1| Queuosine biosynthesis protein [Ktedonobacter racemifer DSM 44963]
Length = 362
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/373 (29%), Positives = 174/373 (46%), Gaps = 46/373 (12%)
Query: 6 FDFDLPPSRIALRPV----FPRDSARLMVVHPNLSCPLVISDHLVSD----LPAFLNSND 57
DF LP A RP RD RLMV + +DH++ D + FL D
Sbjct: 14 LDFVLPAELEATRPPEARGLARDEVRLMVSY-------RANDHILHDRFREIEHFLEPGD 66
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+V N + + A L+ R + E+ + H+ N W V R +K+G+
Sbjct: 67 LLVVNTSGTMNAALSATR---ADGTPLEVHLSTHLPA--NLWIVEVR----LKQGERTFP 117
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELE--RQISLVGTI----PLPPYIARKR- 170
FS+ E + + +L +S L+ RQ + TI PL Y+A
Sbjct: 118 FSEMQAG--ERVPLPGGASLHLLTPYSAGEGRLQPARQRLWIATIELASPLQEYLASYGF 175
Query: 171 PI------DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
PI +A YQT YA GS P+AG FT L++RL++ GI++ + LH G
Sbjct: 176 PIRYNYVPEAWPLEYYQTVYATEYGSAEMPSAGRAFTPELIARLVARGIQIVPLLLHTGV 235
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDG 284
+ + + + + E TA+++N+ + R+V+VGTT +R LET T DG
Sbjct: 236 SSLEEHEPPYEEYYRVPVE-------TAKSINTAHANHKRVVAVGTTVVRALETVTDVDG 288
Query: 285 IINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHA 344
+ +P G+T + ITP RAV+ L++ H P+++ L+++ A G E +K Y A+
Sbjct: 289 VTHPGEGWTRLVITPQRGLRAVNALLTGLHEPRASHLLMLEALAGREHLRKTYAAALQEQ 348
Query: 345 YRFYSYGDTSLLF 357
Y ++ +GD LL
Sbjct: 349 YLWHEFGDLHLLL 361
>gi|159899299|ref|YP_001545546.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Herpetosiphon aurantiacus ATCC 23779]
gi|159892338|gb|ABX05418.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Herpetosiphon aurantiacus ATCC 23779]
Length = 349
Score = 129 bits (324), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 179/373 (47%), Gaps = 42/373 (11%)
Query: 2 MVKEFDFDLPPSRIALRPV----FPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M+ DF+LP A P RD RLMV H S I + L L + D
Sbjct: 1 MLATIDFELPAVLEAGEPPEARGLERDQVRLMVSH---SRSNTIEHYRFDQLSMILQAGD 57
Query: 58 AIVFNNTKVITAQL-----NGVRF-CHINRREKEISCTLHMRVSPNSWSVYARPSKVIKK 111
+ N + + A + +G RF H++ + + +R+ P+ S ++P +
Sbjct: 58 VLAINTSGTLNAAIPATDASGQRFMVHLSTQLLAELWLVEVRL-PHGTS--SQPYRAALA 114
Query: 112 GDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIAR-KR 170
G+ L+ S GQ + N G + I+ + L + PLP Y+A +
Sbjct: 115 GNSLNLPS-GGQIDIHRGYA---NDGSAINRLWIASLRLPQ--------PLPHYLAEHAK 162
Query: 171 PID----ARDYVD--YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
PI A D+ + YQT YA GS P+AG F+ LL+RL++ GI++ + LH G
Sbjct: 163 PIHYQYVAADWPNSYYQTVYATELGSAEMPSAGRAFSERLLTRLVAQGIQIAPLLLHTGV 222
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDG 284
+ D ++E + A +A +N ++ R+++VGTTS+R +E+ + G
Sbjct: 223 ASL-------EDHEPPYAEWYRVPATSADLINRARADHRRVIAVGTTSVRAIESTVDQRG 275
Query: 285 IINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHA 344
+++P +G+T + ITP + +AVD +++ H PK+T L +++A G + + YQ A+
Sbjct: 276 LVHPQAGWTELVITPEHGLQAVDGILTGLHEPKATHLAMLAALAGYQHLELCYQAALEQH 335
Query: 345 YRFYSYGDTSLLF 357
Y ++ +GD L+
Sbjct: 336 YLWHEFGDLHLIL 348
>gi|312147903|gb|ADQ30562.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi JD1]
Length = 271
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 145/282 (51%), Gaps = 32/282 (11%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF F+LP S I P R S+RL+V+ P L + + V+++ ++NSN +
Sbjct: 1 MKTKEFHFNLPHSLIEQYPSEKRGSSRLIVLDPQLQK--IYHKNSVNNILKYINSN---I 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHM----RVSPNSWSVYARPSKVIKKGDILH 116
FNN+K +++ E E+S + R+ N ++ SK G+
Sbjct: 56 FNNSKARKSRIYA---------ESEMSSNVEFLILDRIGTNLFTALVSKSKKQIIGNFYK 106
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIE--LERQISLVGTIPLPPYIARKRPIDA 174
F +G L ++ K N+ E++L F+ + E E+ +PLP YI KR D
Sbjct: 107 F--PEG---LMGEILSK-NSSEVVLKFNNNVGEDYFEKHC----FVPLPSYI--KRDYDK 154
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D YQT Y+K GS A+ TAGLHF+ +L S + I+ F+TLHVG GTF+PV+ +
Sbjct: 155 IDEDRYQTIYSKYVGSTASATAGLHFSRDLFSAFENNNIEYDFITLHVGLGTFLPVRSKK 214
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLL 276
++H MH E I A L + K G RI+S+ TT+LR L
Sbjct: 215 VEEHDMHFETFLIKDFVAVRLQNAKLLGKRILSIVTTTLRFL 256
>gi|302524810|ref|ZP_07277152.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces sp. AA4]
gi|302433705|gb|EFL05521.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces sp. AA4]
Length = 341
Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 170/372 (45%), Gaps = 44/372 (11%)
Query: 1 MMVKEFDFDLPPSRIALRPV----FPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSN 56
M FDL R A P RD RL+ PN + + DL AFL
Sbjct: 1 MTAPRTRFDLAEDRSASAPPEARGLARDEVRLLAAGPN-----GVQHAVFRDLAAFLQPG 55
Query: 57 DAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
D +V N + + A ++ VR H+ ++ + +W V R G +L
Sbjct: 56 DLLVVNTSGTLPAAVDAVRDDHV------VTVHFSTELDDGTWVVELR----TPGGPLLD 105
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIE--LERQISLVGTIPLPPYIAR-KRPID 173
+ + + V+ L ++G + +I + G LP Y+A+ RPI
Sbjct: 106 GRAGERLNLPAGAVV-------TLCEPHVAGAQRLWRAKIEVEGK--LPQYLAKVGRPIR 156
Query: 174 ------ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
A +YQT +A GS P+A FT+ L+++L+S G+ + LH G +
Sbjct: 157 YGYVPRAWPLPNYQTVFALDPGSAEMPSAARPFTAELVTQLVSRGVLFAPILLHTGVSS- 215
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN 287
P E + E + A TA +N V+ +GGR+++VGTT++R +E+A G++
Sbjct: 216 -PEAGEPP-----YGERFRVPATTAALVNWVRDQGGRVIAVGTTAVRAIESAANPGGLVT 269
Query: 288 PWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
+G+T + + P RAVD L++ H P+++ L+L+ A G E ++ Y A+ Y +
Sbjct: 270 AAAGWTELVLGPDRPARAVDGLITGLHAPEASHLLLLEAVVGAELVQRAYDAAVRREYLW 329
Query: 348 YSYGDTSLLFQK 359
+ +GD SLL +
Sbjct: 330 HEFGDVSLLTSR 341
>gi|297195176|ref|ZP_06912574.1| tRNA ribosyltransferase-isomerase [Streptomyces pristinaespiralis
ATCC 25486]
gi|297152670|gb|EDY66072.2| tRNA ribosyltransferase-isomerase [Streptomyces pristinaespiralis
ATCC 25486]
Length = 415
Score = 125 bits (314), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 165/345 (47%), Gaps = 35/345 (10%)
Query: 23 RDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNG-----VRFC 77
RD RL+V S +S H DLP L + D +V N + + A ++G
Sbjct: 89 RDDVRLLV-----SRGTEVSHHGFRDLPGRLRAGDVLVVNTSATLAAAVDGRLGGDAVVV 143
Query: 78 HINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTG 137
H + R + +R + S RP G ++ G+ LEA ++ G
Sbjct: 144 HFSTRGDLGRWAVELRRPDGAGSTLPRPGG--PAGAVVRV-PGGGELVLEAPLV----AG 196
Query: 138 EILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYA----KIQGSVAA 193
L ++ + +++ + G Y R +P+ A YQT +A GS
Sbjct: 197 GERLWWARASVDVPTLLRRYGRPIRYRYTQRDQPLSA-----YQTVFALPSPDGSGSAEM 251
Query: 194 PTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH-IMHSEIGFIDAPTA 252
P+A FT+ +++ L+S G++ + LH G V + H + E + A TA
Sbjct: 252 PSAARPFTAGVVADLVSRGVQFAPLVLHTG--------VASAEAHEPPYPERFEVPATTA 303
Query: 253 QALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSN 312
+N+ ++ GGRIV+VGTT++R LE+A +G++ P SG+T++ +TP RAVD L++
Sbjct: 304 WLVNAARAAGGRIVAVGTTAVRALESAADGEGVVRPVSGWTDLVVTPRRGVRAVDGLLTG 363
Query: 313 FHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
H P+++ L++++A G + Y+ A+ H Y ++ +GD L+
Sbjct: 364 LHEPEASHLLMLAAVAGRDALTCAYEEALRHRYLWHEFGDVHLIL 408
>gi|295093022|emb|CBK82113.1| hypothetical protein [Coprococcus sp. ART55/1]
Length = 118
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 81/117 (69%)
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE I+ A +N K+ GGR+VSVGTTS R LE+ + +DG ++ S +T+IFI P
Sbjct: 1 MHSEFCIIEQDAADMINETKAAGGRVVSVGTTSTRTLESMSDDDGTVHAGSKWTDIFIYP 60
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ +D L++NFHLP+STLLMLVSA E + Y+ A+ YRF+S+GD L+
Sbjct: 61 GYKFKVIDALITNFHLPESTLLMLVSALYDREHILEAYKVAVEEKYRFFSFGDAMLI 117
>gi|87304150|ref|ZP_01086686.1| queuosine biosynthesis protein [Synechococcus sp. WH 5701]
gi|87281443|gb|EAQ73511.1| queuosine biosynthesis protein [Synechococcus sp. WH 5701]
Length = 171
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/159 (47%), Positives = 104/159 (65%), Gaps = 4/159 (2%)
Query: 196 AGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQAL 255
AGLHF+ LL+ L G+ + +TLHVG GTF PV+ ED +HSE ++A +A+
Sbjct: 1 AGLHFSDELLAGLQRKGVGLARITLHVGLGTFRPVETEDLTQLELHSEWIEVNASVVEAI 60
Query: 256 NSVKSRGGRIVSVGTTSLRLLETATT-EDGIINPWSGFTNIFITPGYRFRAVDILMSNFH 314
+ GR+++VGTTS+R LE A + G++ P++G N+ I PGYRF V L++NFH
Sbjct: 61 QQCR---GRVIAVGTTSVRALEGAAQLQGGVLKPFTGPVNLVIQPGYRFAVVQGLLTNFH 117
Query: 315 LPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
LPKS+LL+LVSA G E+ +Y AI H YRF+SYGD
Sbjct: 118 LPKSSLLLLVSALIGREKLLALYAEAIDHEYRFFSYGDA 156
>gi|218133478|ref|ZP_03462282.1| hypothetical protein BACPEC_01344 [Bacteroides pectinophilus ATCC
43243]
gi|217990853|gb|EEC56859.1| hypothetical protein BACPEC_01344 [Bacteroides pectinophilus ATCC
43243]
Length = 118
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/117 (47%), Positives = 79/117 (67%)
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE + A +N+ K+ GGR++ VGTTS R +E+A+ +DG + SG+T IFI P
Sbjct: 1 MHSEYYVVTQEAADKINNAKADGGRVICVGTTSCRTIESASDDDGRVKACSGWTEIFIYP 60
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ +D L++NFHLP+STLLMLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 61 GYKFKVLDALITNFHLPESTLLMLVSALAGREHILAAYKTAVEEKYRFFSFGDAMFI 117
>gi|116204341|ref|XP_001227981.1| hypothetical protein CHGG_10054 [Chaetomium globosum CBS 148.51]
gi|88176182|gb|EAQ83650.1| hypothetical protein CHGG_10054 [Chaetomium globosum CBS 148.51]
Length = 346
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 173/361 (47%), Gaps = 49/361 (13%)
Query: 1 MMVKEFDFDLPPSRIALRPVF----PRDSARLMVVHPNLSCPLVISDHLV-SDLPAFLNS 55
M +EFDF+ P + PV R+S +++V+ + S H V S + F
Sbjct: 1 MRTEEFDFEWDPKAMPQDPVSLRGKSRESGKMLVLDRSTEA----SKHTVFSTICDFFRP 56
Query: 56 NDAIVFNNTKVITAQL----NGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKK 111
D +V N++ +++ L NG H+ E T + + P+ + P +
Sbjct: 57 GDLLVLNDSYMLSNTLKFHANGTD-VHVTVYGHEQDNTAIVSIEPDQ--PWIAPGATMTS 113
Query: 112 GD----ILHFFS----QDGQSRLEATVIDKWNTGEILL-VFSISGIELERQISLVGTIPL 162
D H +DG R + I E+L+ + G L+ T+PL
Sbjct: 114 TDEPALSCHLLEPQQGEDGLWRAQYEPI------ELLMPTLELYGHRLDE------TVPL 161
Query: 163 PPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHV 222
P + ++R DY+ YAK GS+ P+AGLHF+ +L + + G+++ ++TLHV
Sbjct: 162 NPGHWK----NSRK--DYRAVYAKTPGSLEIPSAGLHFSKAILDQAVDKGVEIAYITLHV 215
Query: 223 GAGTFMPVK---VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA 279
GA + ++ E+ ++H + SE + A ++ ++ G R+++VGTT +R LET
Sbjct: 216 GATETLAIRHISEEEIENHKVRSEYFEVGETAAAQISKARAEGRRVIAVGTTVMRTLETL 275
Query: 280 TTEDGIINP---WSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKM 336
P G+T ++I PG+ FRAVD+L++N H P+S+ ++L +AF G + +
Sbjct: 276 AQGKNKRAPLPAQKGWTGLYIYPGFDFRAVDVLLTNLHRPRSSHIVLTAAFAGKDFVMRC 335
Query: 337 Y 337
Y
Sbjct: 336 Y 336
>gi|315048551|ref|XP_003173650.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Arthroderma
gypseum CBS 118893]
gi|311341617|gb|EFR00820.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Arthroderma
gypseum CBS 118893]
Length = 354
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 109/184 (59%), Gaps = 7/184 (3%)
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK---VEDTD 236
Y++ YA GS P+AGLHF+ L++ +++ G++V ++TLHVGA V+ E+ +
Sbjct: 170 YRSVYANKPGSFNVPSAGLHFSDRLMAEVVAKGVEVAYLTLHVGATETFAVRHISEEEIE 229
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINP---WSGFT 293
+H + SE ++ TA +N + RI++VGTT +R LE+ + P SG+T
Sbjct: 230 NHTVRSEYFEVEEKTAAQINRAITENRRIIAVGTTVMRTLESLAVKQEPKTPIKAQSGWT 289
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISH-AYRFYSYGD 352
+++I PG+ FR VD+L++N H P+S+ ++L +AF G + + Y + Y F +GD
Sbjct: 290 DLYIFPGFTFRLVDVLLTNLHQPRSSHIVLTAAFAGKDLVMRSYAEILERGGYEFDMFGD 349
Query: 353 TSLL 356
+ L+
Sbjct: 350 SMLI 353
>gi|167847215|ref|ZP_02472723.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei B7210]
Length = 242
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/244 (35%), Positives = 123/244 (50%), Gaps = 17/244 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
+ + +FDFDLPP IA + R ++RL+ V + N S P + D ++LPA + D +
Sbjct: 2 LTLSDFDFDLPPELIAQTALPERSASRLLEVDNTNPSAPPRLVDRRFAELPACVAPGDLL 61
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFN+TKV+ A RF +I + + R SK G L
Sbjct: 62 VFNDTKVLKA-----RFFGRKASGGKIEVLIERVTGERTALAQIRASKSPPPGTTLTL-- 114
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ TV ++ L + +ER G +PLPPYI + DA D
Sbjct: 115 ---ADAFDVTVGERVEPFFTLHFPDDCLVLIERH----GRLPLPPYI--EHAPDAADETR 165
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H
Sbjct: 166 YQTVFAANPGAVAAPTAGLHFDDAVLAALEARGVERATLTLHVGAGTFQPVRVENLAEHR 225
Query: 240 MHSE 243
MHSE
Sbjct: 226 MHSE 229
>gi|329940706|ref|ZP_08289986.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces griseoaurantiacus M045]
gi|329300000|gb|EGG43898.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces griseoaurantiacus M045]
Length = 415
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 181/418 (43%), Gaps = 79/418 (18%)
Query: 4 KEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNN 63
+E +P R P RD+ RL+V S ++ H +LP L + D ++ N
Sbjct: 14 EELSARVPAERRG--PGLGRDAVRLLV-----SRGTEVTHHAFPELPGLLRAGDLLLVNT 66
Query: 64 TKVITAQLNGVR-----FCHINRREKEISCTLHMRV------------------------ 94
+ + A +G H + R ++ + +R
Sbjct: 67 SPTLAAAADGRLGSDRVVVHFSTRGEDGRWAVELRAPDGRGTTRPRAGGPAGAVVELAEG 126
Query: 95 ------------SPNSW-----SVYARPSKVIKKGDILHFFSQDGQSR-LEATVIDKWNT 136
S W + +AR +V + G+ L DG +R EAT D T
Sbjct: 127 VRLVLEEPLAAGSERLWWARAVAPWARDGRV-RGGNALGGGPHDGGARDGEATGADATGT 185
Query: 137 ----GEILLVFSISGIELERQISLVGTIPLPPYIAR-KRPI----DARDY--VDYQTTYA 185
G + G R + G +P + R RPI RD YQT +A
Sbjct: 186 DARDGGTADAGTRDGGAAGRVVHPSGVADVPGLLRRHGRPIRYAYTERDQPLSAYQTVFA 245
Query: 186 ----KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH-IM 240
GS P+A FT L++ L+S G++ +TLH G V + H
Sbjct: 246 LPGADGAGSAEMPSAARPFTPRLVAELVSRGVQFAPLTLHTG--------VASAEAHEPP 297
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
+ E + +A+ +N+ ++ GGR+V+VGTT++R +E+A DGI+ +G+T++ +TPG
Sbjct: 298 YPERFAVPEASARLVNAARAGGGRVVAVGTTAVRAVESAAGADGIVRACAGWTDLVVTPG 357
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
R VD L++ H P+++ L+++ A G E ++ Y+ A++ Y ++ +GDT LL +
Sbjct: 358 RGVRVVDGLLTGLHEPEASHLLMLEAVAGREAVERGYEEALAGRYLWHEFGDTHLLLR 415
>gi|200389557|ref|ZP_03216168.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|199602002|gb|EDZ00548.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
Length = 359
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 105/183 (57%), Gaps = 4/183 (2%)
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFM---PVKVEDTD 236
Y++ ++K GS+ P+AG+HFT +L+ R+ G + F+TLHV + + ++ + +
Sbjct: 172 YRSVFSKKYGSLEIPSAGIHFTWDLIQRIKDKGGLISFITLHVASTEMLSNRKIQTKCVE 231
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWSGFTNI 295
+ +H E + TA +N+ K GGRI +VGTT R LE+A + E + SG+T +
Sbjct: 232 EVTIHEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLESAYSREHNCLKASSGWTAL 291
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
+I PGY+ + VD L++N H PK+T ++L F G++ K Y + +F +GD L
Sbjct: 292 YIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLMKAYASEDIQSCQFDMFGDCML 351
Query: 356 LFQ 358
+ Q
Sbjct: 352 IIQ 354
>gi|322701657|gb|EFY93406.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Metarhizium acridum CQMa 102]
Length = 324
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 115/209 (55%), Gaps = 13/209 (6%)
Query: 155 SLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIK 214
+L+ +P + AR P+ Y++ YA GS P+AGLHF+ LL+ ++ G++
Sbjct: 121 TLLEALPDQLWRARSAPLA------YRSVYANTPGSFNIPSAGLHFSEALLAEAVAKGVE 174
Query: 215 VYFVTLHVGAGTFMPVK---VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTT 271
V +TLHVGA V+ + ++H + SE + A +N S G R+V+VGTT
Sbjct: 175 VAHITLHVGATETFAVRHITEREIENHKVRSEYFQVGDKAAAQINRAVSEGRRVVAVGTT 234
Query: 272 SLRLLETATTED---GIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFC 328
+R LET + I SG+T+++I PG+ F+ VD+L++N H P+S+ ++L +AF
Sbjct: 235 VMRTLETLAAKQEPKAPIQAQSGWTDLYIYPGFNFKLVDVLLTNLHQPRSSHIVLTAAFA 294
Query: 329 GIEETKKMYQHAIS-HAYRFYSYGDTSLL 356
G E + Y + Y F +GD+ L+
Sbjct: 295 GKELVMRSYAEILEGGGYEFDMFGDSMLI 323
>gi|289772478|ref|ZP_06531856.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces lividans TK24]
gi|289702677|gb|EFD70106.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces lividans TK24]
Length = 359
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 165/356 (46%), Gaps = 38/356 (10%)
Query: 19 PVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNG----V 74
P RD RL+V S +S H ++LP L + D +V N + + A ++G
Sbjct: 24 PGLDRDDVRLLV-----SRGTEVSHHGFAELPGLLRAGDLLVVNTSPTLAAAVDGRVGHA 78
Query: 75 RFC-HINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD-----GQSRLEA 128
R H + R + + +R + AR +G + G +RL
Sbjct: 79 RVVVHFSTRGDDDRWAVELREPDGRGATRARAEAEGVEGRGCGGLAGTKVRLPGGARL-- 136
Query: 129 TVIDK--WNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTT--- 183
V+++ GE L +SG E+ + G Y R +P+ YQT
Sbjct: 137 -VLEEPLSARGERLWWARVSGAEVPALLREHGRPIRYSYTERDQPLSV-----YQTVFAL 190
Query: 184 -YAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH-IMH 241
YA GS P+A FT+ L++ L+S G++ VTLH G V + H +
Sbjct: 191 PYADGTGSAEMPSAARPFTARLVAELVSRGVQFAPVTLHTG--------VASAESHEPPY 242
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E + +A+ +N+V++ GR+V+VGTT++R +E+A DG++ +G+T++ +TP
Sbjct: 243 PERFAVPEASARLINAVRAGDGRVVAVGTTAVRAVESAAGADGVVRARAGWTDLVVTPER 302
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
R VD L++ H P+++ L+++ A G + Y+ A+ Y ++ +GD LL
Sbjct: 303 GVRVVDGLLTGLHEPEASHLLMLEAVAGQAAIDRGYEAAVRRRYLWHEFGDVHLLL 358
>gi|21220294|ref|NP_626073.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces coelicolor A3(2)]
gi|256788586|ref|ZP_05527017.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces lividans TK24]
gi|12718424|emb|CAC28544.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces coelicolor A3(2)]
Length = 358
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 165/356 (46%), Gaps = 38/356 (10%)
Query: 19 PVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNG----V 74
P RD RL+V S +S H ++LP L + D +V N + + A ++G
Sbjct: 23 PGLDRDDVRLLV-----SRGTEVSHHGFAELPGLLRAGDLLVVNTSPTLAAAVDGRVGHA 77
Query: 75 RFC-HINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD-----GQSRLEA 128
R H + R + + +R + AR +G + G +RL
Sbjct: 78 RVVVHFSTRGDDDRWAVELREPDGRGATRARAEAEGVEGRGCGGLAGTKVRLPGGARL-- 135
Query: 129 TVIDK--WNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTT--- 183
V+++ GE L +SG E+ + G Y R +P+ YQT
Sbjct: 136 -VLEEPLSARGERLWWARVSGAEVPALLREHGRPIRYSYTERDQPLSV-----YQTVFAL 189
Query: 184 -YAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH-IMH 241
YA GS P+A FT+ L++ L+S G++ VTLH G V + H +
Sbjct: 190 PYADGTGSAEMPSAARPFTARLVAELVSRGVQFAPVTLHTG--------VASAESHEPPY 241
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E + +A+ +N+V++ GR+V+VGTT++R +E+A DG++ +G+T++ +TP
Sbjct: 242 PERFAVPEASARLINAVRAGDGRVVAVGTTAVRAVESAAGADGVVRARAGWTDLVVTPER 301
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
R VD L++ H P+++ L+++ A G + Y+ A+ Y ++ +GD LL
Sbjct: 302 GVRVVDGLLTGLHEPEASHLLMLEAVAGQAAIDRGYEAAVRRRYLWHEFGDVHLLL 357
>gi|204927616|ref|ZP_03218817.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|204322958|gb|EDZ08154.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
Length = 357
Score = 119 bits (298), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 98/383 (25%), Positives = 179/383 (46%), Gaps = 54/383 (14%)
Query: 1 MMVKEFDFDLPPS-RIALRPVF-----PRDSARLMVVHPNLSCPLVISDHLVSDLPAFLN 54
M+ +++DF + I LRP + R+ +++V++ + + V+D ++
Sbjct: 1 MLTEKYDFRITDQMTIPLRPHWIANDSYREKCKMLVLNRSKGEIHKVDFSKVTD---YIK 57
Query: 55 SNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
D I FN++ +I N + C RR + I L + N + + + D+
Sbjct: 58 EGDVICFNDSTII----NHMFICK-TRRNRLIKIVLEGFLPNNRVIISGLLKERLNANDV 112
Query: 115 LHF-------------FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQI--SLVGT 159
+ FS++ Q R V++ N ++ + G L+ + SL
Sbjct: 113 FYLVDNPGISIKIEQKFSEESQYR---AVVE--NHEALICYLASHGERLDEYVDSSLFYK 167
Query: 160 IPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVT 219
P DA Y++ ++K GS+ P+AG+HFT +L+ R+ G + F+T
Sbjct: 168 YP-----------DA-----YRSVFSKKYGSLEIPSAGIHFTWDLIQRIKDKGGLISFIT 211
Query: 220 LHVGAGTFM---PVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLL 276
LHV + + ++ + ++ ++ E + TA +N+ K GGRI +VGTT R L
Sbjct: 212 LHVASTEMLSNRKIQTKCVEEVTINEEYYEVSQATADIINTAKQNGGRIFAVGTTVTRCL 271
Query: 277 ETA-TTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKK 335
E+A + E + SG+T ++I PGY+ + VD L++N H PK+T ++L F G++ K
Sbjct: 272 ESAYSREHNCLKASSGWTALYIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLMK 331
Query: 336 MYQHAISHAYRFYSYGDTSLLFQ 358
Y + +F +GD L+ Q
Sbjct: 332 AYASEHIQSCKFDMFGDCMLIIQ 354
>gi|312198818|ref|YP_004018879.1| queuosine biosynthesis protein [Frankia sp. EuI1c]
gi|311230154|gb|ADP83009.1| Queuosine biosynthesis protein [Frankia sp. EuI1c]
Length = 368
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 160/356 (44%), Gaps = 29/356 (8%)
Query: 8 FDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVI 67
FDLP A P RD RL+V P + SDL L D +V N + +
Sbjct: 35 FDLPAGLEAAAPPPSRDGVRLLVARPG-----DLRHARFSDLGDQLAPGDLVVVNTSGTL 89
Query: 68 TAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLE 127
A + GVR + ++ + W V RP+ G + + Q L
Sbjct: 90 PAAVAGVRAGG-----ETVAVHFATALDDGDWVVEVRPAGEAVTGPVADLRPGE-QLALP 143
Query: 128 A----TVIDKWNTGEILLVFSISGIE--LERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
A TV G+ L + ++ + ++ VG Y+ +PI+A Y+
Sbjct: 144 AGVRLTVRGPHPAGQRRLWRAYVPVDGGVVAYLAHVGRPIRYSYVPDPQPIEA-----YR 198
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T + + GS P+AG F++ L++ L+S GI V V LH G + P + + +
Sbjct: 199 TVFGRDPGSAEMPSAGRPFSTELVTDLVSRGIGVTPVLLHTGVSSQEPGEPPQPERFRVG 258
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
+ TA+ +N+ + GGR+V+VGTT R LE+A DG + P +G+T++ + P
Sbjct: 259 PQ-------TARLVNATRRWGGRVVAVGTTVTRALESAAAPDGTVRPTAGWTDLVLGPDR 311
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
RAV L++ +H P ++ L L+ A G Y+ A+ Y ++ +GD+ LL
Sbjct: 312 PARAVTGLVTGWHAPGASHLDLLVAVAGPSLVADAYREAVRARYLWHEFGDSCLLL 367
>gi|168235640|ref|ZP_02660698.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|194737330|ref|YP_002114566.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|194712832|gb|ACF92053.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197291067|gb|EDY30420.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
Length = 359
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 105/183 (57%), Gaps = 4/183 (2%)
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFM---PVKVEDTD 236
Y++ ++K GS+ P+AG+HFT +L+ R+ G + F+TLHV + + ++ + +
Sbjct: 172 YRSVFSKKYGSLEIPSAGIHFTWDLIQRIKDKGGLISFITLHVASTEMLSNRKIQTKCVE 231
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWSGFTNI 295
+ ++ E + TA +N+ K GGRI +VGTT R LE+A + E + SG+T +
Sbjct: 232 EVTINEEYYEVSQATADIINTAKQNGGRIFAVGTTVTRCLESAYSREHNCLKASSGWTAL 291
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
+I PGY+ + VD L++N H PK+T ++L F G++ K Y + +F +GD L
Sbjct: 292 YIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLMKAYASEDIQSCQFDMFGDCML 351
Query: 356 LFQ 358
+ Q
Sbjct: 352 IIQ 354
>gi|322707256|gb|EFY98835.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Metarhizium anisopliae ARSEF 23]
Length = 354
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 106/184 (57%), Gaps = 7/184 (3%)
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK---VEDTD 236
Y++ YA GS P+AGLHF+ LL+ ++ G++V +TLHVGA V+ ++ +
Sbjct: 170 YRSVYANTPGSFNIPSAGLHFSEALLAEAVAKGVEVAHITLHVGATETFAVRHITEKEVE 229
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE---DGIINPWSGFT 293
+H + SE + A +N S G R+V+VGTT +R LET + I SG+T
Sbjct: 230 NHKVRSEYFQVGDRAAAQINRAVSGGRRVVAVGTTVMRTLETLAAKLEPKAPIQAQSGWT 289
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAIS-HAYRFYSYGD 352
+++I PG+ F+ VD+L++N H P+S+ ++L +AF G E + Y + Y F +GD
Sbjct: 290 DLYIYPGFNFKLVDVLLTNLHQPRSSHIVLTAAFAGKELVMRSYAEILEGGGYEFDMFGD 349
Query: 353 TSLL 356
+ L+
Sbjct: 350 SMLI 353
>gi|238911778|ref|ZP_04655615.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Tennessee str. CDC07-0191]
Length = 359
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 176/381 (46%), Gaps = 50/381 (13%)
Query: 1 MMVKEFDFDLPPS-RIALRPVF-----PRDSARLMVVHPNLSCPLVISDHLVSDLPAFLN 54
M+ +++DF + I LRP + R+ +++V++ + + V+D ++
Sbjct: 1 MLTEKYDFRITDQMTIPLRPHWIANDSYREKCKMLVLNRSKGEIHKVDFSKVTD---YIK 57
Query: 55 SNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
D I FN++ +I N + C RR + I L + N + + + D+
Sbjct: 58 EGDVICFNDSTII----NHMFICK-TRRNRLIKIVLEGFLPNNRVIISGLLKERLNANDV 112
Query: 115 LHFFSQ-----------DGQSRLEATVIDKWNTGEILLVFSISGIELERQI--SLVGTIP 161
+ G+S+ A V N ++ + G L+ + SL P
Sbjct: 113 FYLVDNPEISIKIEQRFSGESQYRAVV---ENHEALICYLASHGERLDEYVDSSLFYKYP 169
Query: 162 LPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLH 221
DA Y++ ++K GS+ P+AG+HFT +L+ + G + F+TLH
Sbjct: 170 -----------DA-----YRSVFSKKYGSLEIPSAGIHFTWDLIQTIKDKGGLISFITLH 213
Query: 222 VGAGTFMP---VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET 278
V + +P ++ + ++ ++ E + TA +N+ K GGRI +VGTT R LE+
Sbjct: 214 VASTEMLPNRKIQTKCVEEVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLES 273
Query: 279 A-TTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMY 337
A + E + SG+T ++I PGY+ + VD L++N H PK+T ++L F G++ K Y
Sbjct: 274 AYSREHNCLKASSGWTALYIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLMKAY 333
Query: 338 QHAISHAYRFYSYGDTSLLFQ 358
+ +F +GD L+ Q
Sbjct: 334 ASEDIQSCQFDMFGDCMLIIQ 354
>gi|218133477|ref|ZP_03462281.1| hypothetical protein BACPEC_01343 [Bacteroides pectinophilus ATCC
43243]
gi|217990852|gb|EEC56858.1| hypothetical protein BACPEC_01343 [Bacteroides pectinophilus ATCC
43243]
Length = 200
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/208 (37%), Positives = 105/208 (50%), Gaps = 14/208 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F +DLP IA P+ R ++RLM++ N I + D+ +LN D +V
Sbjct: 2 MELHDFYYDLPQELIAQDPLSDRSASRLMLLDKNTG---EIEHKIFKDIIDYLNPGDCLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G R E+ + W V +P K K G + F
Sbjct: 59 INDTKVIPARLIGERVG--TGATIEVLLLKRKEDMKDVWEVLVKPGKKAKIGTKISF--- 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A VID G L+ F+ GI E + +G +PLPPYI K +D Y
Sbjct: 114 -GDGRLVAEVIDIVEEGNRLIQFTYEGI-FEEILDELGQMPLPPYITHK----LQDKNRY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRL 208
QT YAK +GS AAPTAGLHFT LL R+
Sbjct: 168 QTVYAKHEGSAAAPTAGLHFTKELLERI 195
>gi|168229939|ref|ZP_02654997.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|194470161|ref|ZP_03076145.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|194456525|gb|EDX45364.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|205335353|gb|EDZ22117.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
Length = 357
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 105/183 (57%), Gaps = 4/183 (2%)
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFM---PVKVEDTD 236
Y++ ++K GS+ P+AG+HFT +L+ R+ G + F+TLHV + + ++ + +
Sbjct: 172 YRSVFSKKYGSLEIPSAGIHFTWDLIQRIKDKGGLISFITLHVASTEMLSNRKIQTKCVE 231
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWSGFTNI 295
+ ++ E + TA +N+ K GGRI +VGTT R LE+A + E + SG+T +
Sbjct: 232 EVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLESAYSREHNCLKASSGWTAL 291
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
+I PGY+ + VD L++N H PK+T ++L F G++ K Y + +F +GD L
Sbjct: 292 YIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLMKAYASEDIQSCQFDMFGDCML 351
Query: 356 LFQ 358
+ Q
Sbjct: 352 IIQ 354
>gi|197248887|ref|YP_002146493.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|197212590|gb|ACH49987.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
Length = 359
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 105/183 (57%), Gaps = 4/183 (2%)
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFM---PVKVEDTD 236
Y++ ++K GS+ P+AG+HFT +L+ R+ G + F+TLHV + + ++ + +
Sbjct: 172 YRSVFSKKYGSLEIPSAGIHFTWDLIQRIKDKGGLISFITLHVASTEMLSNRKIQTKCVE 231
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWSGFTNI 295
+ ++ E + TA +N+ K GGRI +VGTT R LE+A + E + SG+T +
Sbjct: 232 EVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLESAYSREHNCLKASSGWTAL 291
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
+I PGY+ + VD L++N H PK+T ++L F G++ K Y + +F +GD L
Sbjct: 292 YIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLMKAYASEDIQSCQFDMFGDCML 351
Query: 356 LFQ 358
+ Q
Sbjct: 352 IIQ 354
>gi|322616167|gb|EFY13083.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 315996572]
gi|322620892|gb|EFY17751.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 495297-1]
gi|322623017|gb|EFY19859.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 495297-3]
gi|322628307|gb|EFY25095.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 495297-4]
gi|322634712|gb|EFY31443.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 515920-1]
gi|322638721|gb|EFY35416.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 515920-2]
gi|322641114|gb|EFY37758.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 531954]
gi|322646522|gb|EFY43030.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. NC_MB110209-0054]
gi|322649113|gb|EFY45554.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. OH_2009072675]
gi|322654510|gb|EFY50832.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. CASC_09SCPH15965]
gi|322660771|gb|EFY57004.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 19N]
gi|322665127|gb|EFY61315.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 81038-01]
gi|322667871|gb|EFY64031.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. MD_MDA09249507]
gi|322671717|gb|EFY67838.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 414877]
gi|322677237|gb|EFY73301.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 366867]
gi|322680100|gb|EFY76139.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 413180]
gi|322685471|gb|EFY81467.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 446600]
gi|323193680|gb|EFZ78884.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 609458-1]
gi|323199987|gb|EFZ85075.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 556150-1]
gi|323204718|gb|EFZ89715.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 609460]
gi|323205716|gb|EFZ90679.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 507440-20]
gi|323214108|gb|EFZ98869.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 556152]
gi|323216779|gb|EGA01503.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. MB101509-0077]
gi|323223044|gb|EGA07388.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. MB102109-0047]
gi|323225192|gb|EGA09438.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. MB110209-0055]
gi|323231905|gb|EGA16012.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. MB111609-0052]
gi|323234432|gb|EGA18519.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 2009083312]
gi|323237883|gb|EGA21942.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 2009085258]
gi|323243516|gb|EGA27535.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 315731156]
gi|323249513|gb|EGA33427.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2009159199]
gi|323254242|gb|EGA38060.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008282]
gi|323255068|gb|EGA38854.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008283]
gi|323261270|gb|EGA44858.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008284]
gi|323266635|gb|EGA50122.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008285]
Length = 359
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 105/183 (57%), Gaps = 4/183 (2%)
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFM---PVKVEDTD 236
Y++ ++K GS+ P+AG+HFT +L+ R+ G + F+TLHV + + ++ + +
Sbjct: 172 YRSVFSKKYGSLEIPSAGIHFTWDLIQRIKDKGGLISFITLHVASTEMLSNRKIQTKCVE 231
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWSGFTNI 295
+ ++ E + TA +N+ K GGRI +VGTT R LE+A + E + SG+T +
Sbjct: 232 EVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLESAYSREHNCLKASSGWTAL 291
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
+I PGY+ + VD L++N H PK+T ++L F G++ K Y + +F +GD L
Sbjct: 292 YIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLMKAYASEHIQSCKFDMFGDCML 351
Query: 356 LFQ 358
+ Q
Sbjct: 352 IIQ 354
>gi|168819315|ref|ZP_02831315.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Weltevreden
str. HI_N05-537]
gi|205343622|gb|EDZ30386.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Weltevreden
str. HI_N05-537]
Length = 359
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 105/183 (57%), Gaps = 4/183 (2%)
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFM---PVKVEDTD 236
Y++ ++K GS+ P+AG+HFT +L+ R+ G + F+TLHV + + ++ + +
Sbjct: 172 YRSVFSKKYGSLEIPSAGIHFTWDLIQRIKDKGGLISFITLHVASTEMLSNRKIQTKCVE 231
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWSGFTNI 295
+ ++ E + TA +N+ K GGRI +VGTT R LE+A + E + SG+T +
Sbjct: 232 EVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLESAYSREHNCLKASSGWTAL 291
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
+I PGY+ + VD L++N H PK+T ++L F G++ K Y + +F +GD L
Sbjct: 292 YIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLMKAYASEDIQSCQFDMFGDCML 351
Query: 356 LFQ 358
+ Q
Sbjct: 352 IIQ 354
>gi|167549997|ref|ZP_02343755.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
gi|205325017|gb|EDZ12856.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
Length = 359
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 105/183 (57%), Gaps = 4/183 (2%)
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFM---PVKVEDTD 236
Y++ ++K GS+ P+AG+HFT +L+ R+ G + F+TLHV + + ++ + +
Sbjct: 172 YRSVFSKKYGSLEIPSAGIHFTWDLIQRIKDKGGLISFITLHVASTEMLSNRKIQTKCVE 231
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWSGFTNI 295
+ ++ E + TA +N+ K GGRI +VGTT R LE+A + E + SG+T +
Sbjct: 232 EVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLESAYSREHNCLKASSGWTAL 291
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
+I PGY+ + VD L++N H PK+T ++L F G++ K Y + +F +GD L
Sbjct: 292 YIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLMKAYASEDIQSCQFDMFGDCML 351
Query: 356 LFQ 358
+ Q
Sbjct: 352 IIQ 354
>gi|300783463|ref|YP_003763754.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Amycolatopsis mediterranei U32]
gi|299792977|gb|ADJ43352.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Amycolatopsis mediterranei U32]
Length = 335
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 160/357 (44%), Gaps = 31/357 (8%)
Query: 8 FDLPPSRIALRPV----FPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNN 63
FDLP A P RD RL+V + P + + L L D +V N
Sbjct: 5 FDLPAELSASAPPEARGLSRDEVRLLV-----ASPAGVHHTAFTGLGEHLRPGDLLVVNT 59
Query: 64 TKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYAR-PSKVIKKGDILHFFSQDG 122
+ + A ++ R + + R+ SW V R P + G + G
Sbjct: 60 SGTLPAAVDA------RRNGRPVVVHFATRLDDGSWVVELRAPDGPLLDGRPGERLALAG 113
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ L T++ G L + + IE+ ++ G Y+ R P+ DYQT
Sbjct: 114 DASL--TLLAPAVPGTARLWRATASIEVRALLAAAGRPIRYGYVPRAWPLS-----DYQT 166
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
+A+ GS P+A FT L++ L++ G+ + LH G + P E +
Sbjct: 167 VFAREPGSAEMPSAARPFTPELVTGLVTDGVLFAPLLLHTGVSS--PEAAEPP-----QA 219
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E + TA ++ V+ RGGR+V+VGTT+ R LE+A + G + G+T + + P
Sbjct: 220 ERYRVPPTTAALVSWVRERGGRVVAVGTTAARALESAASA-GRVRAAEGWTELVLGPDRP 278
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
R VD +++ H P+++ L+L+ A G E +K Y+ A+ Y ++ +GD SLL ++
Sbjct: 279 ARVVDGIVTGLHAPEASHLLLLEAVAGAEVVQKAYEAAVEERYLWHEFGDVSLLLRR 335
>gi|16420070|gb|AAL20467.1| putative S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Typhimurium
str. LT2]
Length = 346
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 105/183 (57%), Gaps = 4/183 (2%)
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFM---PVKVEDTD 236
Y++ ++K GS+ P+AG+HFT +L+ R+ G + F+TLHV + + ++ + +
Sbjct: 159 YRSVFSKKYGSLEIPSAGIHFTWDLIQRIKDKGGLISFITLHVASTEMLSNRKIQTKCVE 218
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWSGFTNI 295
+ ++ E + TA +N+ K GGRI +VGTT R LE+A + E + SG+T +
Sbjct: 219 EVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLESAYSREHNCLKASSGWTAL 278
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
+I PGY+ + VD L++N H PK+T ++L F G++ K Y + +F +GD L
Sbjct: 279 YIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLIKAYTSEHIQSCQFDMFGDCML 338
Query: 356 LFQ 358
+ Q
Sbjct: 339 IIQ 341
>gi|168463025|ref|ZP_02696956.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|195634554|gb|EDX52906.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Newport
str. SL317]
Length = 359
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 105/183 (57%), Gaps = 4/183 (2%)
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFM---PVKVEDTD 236
Y++ ++K GS+ P+AG+HFT +L+ R+ G + F+TLHV + + ++ + +
Sbjct: 172 YRSVFSKKYGSLEIPSAGIHFTWDLIQRIKDKGGLISFITLHVASTEMLSNRKIQTKCVE 231
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWSGFTNI 295
+ ++ E + TA +N+ K GGRI +VGTT R LE+A + E + SG+T +
Sbjct: 232 EVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLESAYSREHNCLKASSGWTAL 291
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
+I PGY+ + VD L++N H PK+T ++L F G++ K Y + +F +GD L
Sbjct: 292 YIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLIKAYTSEHIQSCQFDMFGDCML 351
Query: 356 LFQ 358
+ Q
Sbjct: 352 IIQ 354
>gi|39546320|ref|NP_460508.2| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|167992895|ref|ZP_02573990.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205328936|gb|EDZ15700.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|267993455|gb|ACY88340.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Typhimurium
str. 14028S]
gi|301158076|emb|CBW17572.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|312912533|dbj|BAJ36507.1| putative S-adenosylmethionine:tRNA- ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Typhimurium
str. T000240]
gi|321224168|gb|EFX49231.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhimurium str.
TN061786]
gi|323129817|gb|ADX17247.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Typhimurium
str. 4/74]
Length = 359
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 105/183 (57%), Gaps = 4/183 (2%)
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFM---PVKVEDTD 236
Y++ ++K GS+ P+AG+HFT +L+ R+ G + F+TLHV + + ++ + +
Sbjct: 172 YRSVFSKKYGSLEIPSAGIHFTWDLIQRIKDKGGLISFITLHVASTEMLSNRKIQTKCVE 231
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWSGFTNI 295
+ ++ E + TA +N+ K GGRI +VGTT R LE+A + E + SG+T +
Sbjct: 232 EVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLESAYSREHNCLKASSGWTAL 291
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
+I PGY+ + VD L++N H PK+T ++L F G++ K Y + +F +GD L
Sbjct: 292 YIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLIKAYTSEHIQSCQFDMFGDCML 351
Query: 356 LFQ 358
+ Q
Sbjct: 352 IIQ 354
>gi|194442935|ref|YP_002040797.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Newport
str. SL254]
gi|194401598|gb|ACF61820.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Newport
str. SL254]
Length = 359
Score = 117 bits (292), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 105/183 (57%), Gaps = 4/183 (2%)
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFM---PVKVEDTD 236
Y++ ++K GS+ P+AG+HFT +L+ R+ G + F+TLHV + + ++ + +
Sbjct: 172 YRSVFSKKYGSLEIPSAGIHFTWDLIQRIKDKGGLISFITLHVASTEMLSNRKIQTKCVE 231
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWSGFTNI 295
+ ++ E + TA +N+ K GGRI +VGTT R LE+A + E + SG+T +
Sbjct: 232 EVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLESAYSREHNCLKASSGWTAL 291
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
+I PGY+ + VD L++N H PK+T ++L F G++ K Y + +F +GD L
Sbjct: 292 YIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLIKAYTSEHIQSCQFDMFGDCML 351
Query: 356 LFQ 358
+ Q
Sbjct: 352 IIQ 354
>gi|168241078|ref|ZP_02666010.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Heidelberg
str. SL486]
gi|194450885|ref|YP_002045586.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Heidelberg
str. SL476]
gi|207856952|ref|YP_002243603.1| isomerase [Salmonella enterica subsp. enterica serovar Enteritidis
str. P125109]
gi|194409189|gb|ACF69408.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Heidelberg
str. SL476]
gi|205339445|gb|EDZ26209.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Heidelberg
str. SL486]
gi|206708755|emb|CAR33083.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
Length = 357
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 105/183 (57%), Gaps = 4/183 (2%)
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFM---PVKVEDTD 236
Y++ ++K GS+ P+AG+HFT +L+ ++ G + F+TLHV + + ++ + +
Sbjct: 172 YRSVFSKKYGSLEIPSAGIHFTWDLIQKIKDKGGLISFITLHVASTEMLSNRKIQTKCVE 231
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWSGFTNI 295
+ ++ E + TA +N+ K GGRI +VGTT R LE+A + E + SG+T +
Sbjct: 232 EVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLESAYSREHNCLKASSGWTAL 291
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
+I PGY+ + VD L++N H PK+T ++L F G++ K Y + +F +GD L
Sbjct: 292 YIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLMKAYASEDIQSCQFDMFGDCML 351
Query: 356 LFQ 358
+ Q
Sbjct: 352 IIQ 354
>gi|168260278|ref|ZP_02682251.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Hadar str.
RI_05P066]
gi|197262986|ref|ZP_03163060.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|197241241|gb|EDY23861.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|205351111|gb|EDZ37742.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Hadar str.
RI_05P066]
Length = 359
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 105/183 (57%), Gaps = 4/183 (2%)
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFM---PVKVEDTD 236
Y++ ++K GS+ P+AG+HFT +L+ R+ G + F+TLHV + + ++ + +
Sbjct: 172 YRSVFSKKYGSLEIPSAGIHFTWDLIQRIKDKGGLISFITLHVASTEMLSNRKIQTKCVE 231
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWSGFTNI 295
+ ++ E + TA +N+ K GGRI +VGTT R LE+A + E + SG+T +
Sbjct: 232 EVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLESAYSREHNCLKASSGWTAL 291
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
+I PGY+ + VD L++N H PK+T ++L F G++ K Y + +F +GD L
Sbjct: 292 YIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLIKAYTSEHIQSCQFDMFGDCML 351
Query: 356 LFQ 358
+ Q
Sbjct: 352 IIQ 354
>gi|161614013|ref|YP_001587978.1| hypothetical protein SPAB_01752 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|161363377|gb|ABX67145.1| hypothetical protein SPAB_01752 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 326
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 105/183 (57%), Gaps = 4/183 (2%)
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFM---PVKVEDTD 236
Y++ ++K GS+ P+AG+HFT +L+ R+ G + F+TLHV + + ++ + +
Sbjct: 139 YRSVFSKKYGSLEIPSAGIHFTWDLIQRIKDKGGLISFITLHVASTEMLSNRKIQTKCVE 198
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWSGFTNI 295
+ ++ E + TA +N+ K GGRI +VGTT R LE+A + E + SG+T +
Sbjct: 199 EVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLESAYSREYNCLKASSGWTAL 258
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
+I PGY+ + VD L++N H PK+T ++L F G++ K Y + +F +GD L
Sbjct: 259 YIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLMKAYASEDIQSCQFDMFGDCML 318
Query: 356 LFQ 358
+ Q
Sbjct: 319 IIQ 321
>gi|302561407|ref|ZP_07313749.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces griseoflavus Tu4000]
gi|302479025|gb|EFL42118.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces griseoflavus Tu4000]
Length = 347
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 162/354 (45%), Gaps = 45/354 (12%)
Query: 19 PVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGV---- 74
P RDS RL+V S +S H +LP L + D +V N + + A + G
Sbjct: 22 PGLDRDSVRLLV-----SRGTAVSHHAFMELPRLLRAGDLLVVNTSPTLAAAVGGWIGHG 76
Query: 75 -RFCHINRREKEISCTLHMRVSPNSWSVYARP-----SKVIKKGDILHFFSQDGQSRLEA 128
H + R + + +R + AR ++V G + + +R
Sbjct: 77 RVVVHFSTRGDDGRWAVELRDPDGHGTTRARAGAPAGTEVRLAGGVRLVLEEPLSAR--- 133
Query: 129 TVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYA--- 185
GE L SG ++ + G Y R +P+ A YQT +A
Sbjct: 134 --------GERLWWARASG-DVRGALREYGRPIRYAYTERDQPLSA-----YQTVFALPS 179
Query: 186 -KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH-IMHSE 243
GS P+AG FT+ +++ L+S G++ VTLH G V + H ++E
Sbjct: 180 PDGAGSAEMPSAGRPFTARMVTELVSRGVQFAPVTLHCG--------VASQEAHEPPYAE 231
Query: 244 IGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRF 303
+ +A+ + +V++ GGR+++VGTT++R +E+A DG++ +G+T++ +TP
Sbjct: 232 RFVVPEASARLIGAVRAGGGRVIAVGTTAVRAVESAAGADGVVRARAGWTDLVVTPERGV 291
Query: 304 RAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
R VD L++ H P+++ L+++ A G + Y+ A+ Y ++ +GD L+
Sbjct: 292 RVVDGLLTGLHEPEASHLLMLEAVAGRAAVGRGYEEALGGRYLWHEFGDVHLVL 345
>gi|213864765|ref|ZP_03386884.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Typhi str. M223]
Length = 358
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 105/183 (57%), Gaps = 4/183 (2%)
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFM---PVKVEDTD 236
Y++ ++K GS+ P+AG+HFT +L+ ++ G + F+TLHV + + ++ + +
Sbjct: 171 YRSVFSKKYGSLEIPSAGIHFTWDLIQKIKDKGGLISFITLHVASTEMLSNRKIQTKCVE 230
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWSGFTNI 295
+ ++ E + TA +N+ K GGRI +VGTT R LE+A + E + SG+T +
Sbjct: 231 EVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLESAYSREHNCLKASSGWTAL 290
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
+I PGY+ + VD L++N H PK+T ++L F G++ K Y + +F +GD L
Sbjct: 291 YIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLMKAYASEDIQSCQFDMFGDCML 350
Query: 356 LFQ 358
+ Q
Sbjct: 351 IIQ 353
>gi|16760321|ref|NP_455938.1| isomerase [Salmonella enterica subsp. enterica serovar Typhi str.
CT18]
gi|29141915|ref|NP_805257.1| isomerase [Salmonella enterica subsp. enterica serovar Typhi str.
Ty2]
gi|213160920|ref|ZP_03346630.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Typhi str. E00-7866]
gi|213426452|ref|ZP_03359202.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Typhi str. E02-1180]
gi|213613345|ref|ZP_03371171.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Typhi str. E98-2068]
gi|213648021|ref|ZP_03378074.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Typhi str. J185]
gi|289826334|ref|ZP_06545446.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Typhi str. E98-3139]
gi|25318249|pir||AG0674 probable isomerase STY1513 [imported] - Salmonella enterica subsp.
enterica serovar Typhi (strain CT18)
gi|16502616|emb|CAD01768.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Typhi]
gi|29137544|gb|AAO69106.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
Length = 359
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 105/183 (57%), Gaps = 4/183 (2%)
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFM---PVKVEDTD 236
Y++ ++K GS+ P+AG+HFT +L+ ++ G + F+TLHV + + ++ + +
Sbjct: 172 YRSVFSKKYGSLEIPSAGIHFTWDLIQKIKDKGGLISFITLHVASTEMLSNRKIQTKCVE 231
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWSGFTNI 295
+ ++ E + TA +N+ K GGRI +VGTT R LE+A + E + SG+T +
Sbjct: 232 EVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLESAYSREHNCLKASSGWTAL 291
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
+I PGY+ + VD L++N H PK+T ++L F G++ K Y + +F +GD L
Sbjct: 292 YIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLMKAYASEDIQSCQFDMFGDCML 351
Query: 356 LFQ 358
+ Q
Sbjct: 352 IIQ 354
>gi|323271361|gb|EGA54787.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
Length = 203
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 105/183 (57%), Gaps = 4/183 (2%)
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFM---PVKVEDTD 236
Y++ ++K GS+ P+AG+HFT +L+ R+ G + F+TLHV + + ++ + +
Sbjct: 16 YRSVFSKKYGSLEIPSAGIHFTWDLIQRIKDKGGLISFITLHVASTEMLSNRKIQTKCVE 75
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWSGFTNI 295
+ ++ E + TA +N+ K GGRI +VGTT R LE+A + E + SG+T +
Sbjct: 76 EVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLESAYSREHNCLKASSGWTAL 135
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
+I PGY+ + VD L++N H PK+T ++L F G++ K Y + +F +GD L
Sbjct: 136 YIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLMKAYASEHIQSCKFDMFGDCML 195
Query: 356 LFQ 358
+ Q
Sbjct: 196 IIQ 198
>gi|167567923|ref|ZP_02360839.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Burkholderia oklahomensis EO147]
Length = 354
Score = 115 bits (288), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 183/379 (48%), Gaps = 47/379 (12%)
Query: 1 MMVKEFDFDLPPSRIALRPVF----PRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSN 56
M +FDF L + P RDS R++V+ I + + + L
Sbjct: 1 MKTDDFDFGLDWKAMPTDPAELRGKRRDSGRMIVLD---RAAATIEHTIFATISDRLRPG 57
Query: 57 DAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWS-VYARPSKVIKKGDIL 115
D +VFN++ +++ N + F H N E + + P+ S V R S+ + G L
Sbjct: 58 DLLVFNDSYMLS---NTLPFRHGN----ESAHVIVYGQEPDGTSIVELRSSQSPRPGLTL 110
Query: 116 HFFSQDGQSRLEATVIDK-----WNT-----GEILLVFSISGIELERQISLVGTIPLPPY 165
+ S+L T++ W G+++ V G + TIPL P
Sbjct: 111 ---TATDDSQLSCTLLSPEPNQLWRARFEPAGKLVGVLDRRGWRSDE------TIPLNPV 161
Query: 166 IARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAG 225
R RP DA Y++ YA+ GS+ P+AGLHF++++L RL G++ ++TLHVGA
Sbjct: 162 YWRTRP-DA-----YRSVYARKPGSLEIPSAGLHFSTDVLRRLADKGVEFAYITLHVGAT 215
Query: 226 TFMPVKVEDTDD---HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--AT 280
+ V+ D D+ H + E + A A +N ++ RI+++GTT++R LE+ A
Sbjct: 216 EILAVRHIDEDEVEQHKVRPEYFEVGAEAAGQINRARAERRRIIAIGTTAMRTLESLAAH 275
Query: 281 TEDG-IINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQH 339
E G + +G+T ++I PG+ F+ + L++N H P+S+ ++L +AF G + + Y
Sbjct: 276 GEPGAALRAQAGWTQLYIYPGFEFKIANGLLTNLHRPRSSHIVLTAAFAGKDLVMRGYAE 335
Query: 340 AIS-HAYRFYSYGDTSLLF 357
+ Y F +GD+ L+
Sbjct: 336 ILEMGGYEFDMFGDSMLIL 354
>gi|167573201|ref|ZP_02366075.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Burkholderia oklahomensis C6786]
Length = 354
Score = 115 bits (288), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 106/379 (27%), Positives = 183/379 (48%), Gaps = 47/379 (12%)
Query: 1 MMVKEFDFDLPPSRIALRPVF----PRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSN 56
M +FDF L + P RDS R++V+ I + + + L
Sbjct: 1 MKTDDFDFGLDWKAMPTDPAELRGKRRDSGRMIVLD---RAAATIEHTIFATISDRLRPG 57
Query: 57 DAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYA-RPSKVIKKGDIL 115
D +VFN++ +++ N + F H N E + + P+ S+ R S+ + G L
Sbjct: 58 DLLVFNDSYMLS---NTLPFRHGN----ESAHVIVYGQEPDGTSIVELRSSQSPRPGLTL 110
Query: 116 HFFSQDGQSRLEATVIDK-----WNT-----GEILLVFSISGIELERQISLVGTIPLPPY 165
+ S+L T++ W G+++ V G + TIPL P
Sbjct: 111 ---TATDDSQLSCTLLSPEPNQLWRARFEPAGKLVGVLDRRGWRSDE------TIPLNPV 161
Query: 166 IARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAG 225
R RP DA Y++ YA+ GS+ P+AGLHF++++L RL G++ ++TLHVGA
Sbjct: 162 YWRTRP-DA-----YRSVYARKPGSLEIPSAGLHFSTDVLRRLADKGVEFAYITLHVGAT 215
Query: 226 TFMPVKVEDTDD---HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--AT 280
+ V+ D D+ H + E + A A +N ++ RI+++GTT++R LE+ A
Sbjct: 216 EILAVRHIDEDEVEQHKVRPEYFEVGAKAAGQINRARAERRRIIAIGTTAMRTLESLAAH 275
Query: 281 TEDG-IINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQH 339
E G + +G+T ++I PG+ F+ + L++N H P+S+ ++L +AF G + + Y
Sbjct: 276 GEPGAALRAQAGWTQLYIYPGFEFKIANGLLTNLHRPRSSHIVLTAAFAGKDLVMRGYAE 335
Query: 340 AIS-HAYRFYSYGDTSLLF 357
+ Y F +GD+ L+
Sbjct: 336 ILEMGGYEFDMFGDSMLIL 354
>gi|213417400|ref|ZP_03350542.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Typhi str. E01-6750]
Length = 196
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 105/183 (57%), Gaps = 4/183 (2%)
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFM---PVKVEDTD 236
Y++ ++K GS+ P+AG+HFT +L+ ++ G + F+TLHV + + ++ + +
Sbjct: 9 YRSVFSKKYGSLEIPSAGIHFTWDLIQKIKDKGGLISFITLHVASTEMLSNRKIQTKCVE 68
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWSGFTNI 295
+ ++ E + TA +N+ K GGRI +VGTT R LE+A + E + SG+T +
Sbjct: 69 EVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLESAYSREHNCLKASSGWTAL 128
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
+I PGY+ + VD L++N H PK+T ++L F G++ K Y + +F +GD L
Sbjct: 129 YIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLMKAYASEDIQSCQFDMFGDCML 188
Query: 356 LFQ 358
+ Q
Sbjct: 189 IIQ 191
>gi|271962077|ref|YP_003336273.1| S-adenosylmethionine tRNA ribosyltransferase [Streptosporangium
roseum DSM 43021]
gi|270505252|gb|ACZ83530.1| S-adenosylmethionine tRNA ribosyltransferase [Streptosporangium
roseum DSM 43021]
Length = 371
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 156/360 (43%), Gaps = 44/360 (12%)
Query: 23 RDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRR 82
RD RL+V H I+ H ++LP L+ D +V NN+ + A + R
Sbjct: 32 RDGVRLLVSH---GATGEITHHGFAELPGLLHPGDLLVVNNSATLPAAVRLDRLAVHFST 88
Query: 83 EKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNT------ 136
E+E +W V R + G QD + R T
Sbjct: 89 ERED----------GTWLVELRRRMERRSGPGGGGAGQDARDRRRPGTAPAAGTEMASEP 138
Query: 137 ------GEILLVFSISGIEL-ERQISLVGTIPL----PPYIAR-KRPID----ARDY--V 178
GE L + + + L +R+ + L P Y+ R PI RD+
Sbjct: 139 YPGGAAGEWLPLPGGATLRLLDRETPRLWRARLDREVPAYLRRYGVPIRYSYVERDWPLE 198
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT + GS P+AG FT+ L++ L+S GI V +TLH G V TD+
Sbjct: 199 DYQTVFGIRPGSAEMPSAGRPFTAELVTGLVSRGIGVAPITLHTG------VTSPSTDEP 252
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
+A TA+ + GGR+++VGTT +R LETA G + G+T+ +T
Sbjct: 253 PCPEWFEVSEA-TARQAELTRESGGRVIAVGTTVVRALETAALACGRVRAARGWTSHLVT 311
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
P RAV+ L++ H P+S+ L ++SA G E + Y A+ Y ++ +GD L+ Q
Sbjct: 312 PSAGVRAVNGLITGLHGPRSSHLPMLSAIAGGELLSRSYAEALGEGYLWHEFGDVHLILQ 371
>gi|297198724|ref|ZP_06916121.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces sviceus ATCC 29083]
gi|197715395|gb|EDY59429.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces sviceus ATCC 29083]
Length = 358
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 157/359 (43%), Gaps = 53/359 (14%)
Query: 19 PVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCH 78
P RD+ RL+V S +S H +LP L + D +V N + + A ++G R H
Sbjct: 22 PGLDRDAVRLLV-----SRSTEVSHHAFGELPRLLRAGDLLVVNTSPTLAAAVDG-RIRH 75
Query: 79 INRREKEISCTLHMRVSPNSWSVYAR------PSKVIKKGDILHFFSQDGQSRL---EAT 129
+ R W+V R ++ G G RL EA
Sbjct: 76 AR-----VVVHFSTRGDDGRWAVELRDPDGRGTTRARAGGPAGTEVRLPGGGRLILEEAV 130
Query: 130 VIDKWNT----GEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYA 185
W GE+L + G + Y R +P+ YQT +A
Sbjct: 131 SGRLWWARVCGGEVLGLLREHGRPIRYS-----------YTERDQPLSV-----YQTVFA 174
Query: 186 ----KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH-IM 240
GS P+A FT+ L++ L+S G++ VTLH G V + H
Sbjct: 175 LPSPDGAGSAEMPSAARPFTARLVAELVSRGVQFAPVTLHTG--------VASAEAHEPP 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
+ E + +A+ +N+ K+ GR+V+VGTT++R +E+A DG++ +G+T++ +TP
Sbjct: 227 YPERFSVPEASARLINAAKAGDGRVVAVGTTAVRAVESAAGADGVVRARAGWTDLVVTPE 286
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
R VD L++ H P+++ L+++ A G + Y+ A+ Y ++ +GD LL +
Sbjct: 287 RGVRVVDGLLTGLHEPEASHLLMLEAVAGRAAIDRGYEEALRRNYLWHEFGDVHLLLPQ 345
>gi|213580920|ref|ZP_03362746.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhi str. E98-0664]
Length = 120
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 75/105 (71%), Gaps = 2/105 (1%)
Query: 254 ALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFITPGYRFRAVDILMS 311
A+ + K+RG R+++VGTTS+R LE+A + +I P+ G T IFI PGY+++ +D L++
Sbjct: 5 AVLAAKARGNRVIAVGTTSVRSLESAAQAAKSDLIEPFFGDTQIFIYPGYQYKVIDALIT 64
Query: 312 NFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 65 NFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQKYRFFSYGDAMFI 109
>gi|270714907|ref|ZP_06223194.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae HK1212]
gi|270315620|gb|EFA27811.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae HK1212]
Length = 150
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/112 (48%), Positives = 73/112 (65%), Gaps = 2/112 (1%)
Query: 154 ISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGI 213
+ +G +PLP YI RP + D YQT Y+K+ G+VAAPTAGLHF NLL +L + G+
Sbjct: 41 LQTIGHMPLPLYI--DRPDEEADKECYQTVYSKVPGAVAAPTAGLHFDENLLEKLKAKGV 98
Query: 214 KVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRI 265
FVTLHVGAGTF PV+VE+ +DH+MH+E + A+ + K G R+
Sbjct: 99 NFEFVTLHVGAGTFQPVRVENIEDHVMHAEYVEVSQEVCNAIIATKKAGKRV 150
>gi|330937010|gb|EGH41103.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. pisi str. 1704B]
Length = 111
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/94 (58%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
Query: 263 GRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLM 322
GR+++VGTTS+R LE+A DG + P+SG T+IFI PG F VD L++NFHLP+STLLM
Sbjct: 1 GRVIAVGTTSVRSLESAA-RDGELKPFSGDTDIFIYPGRPFHVVDALVTNFHLPESTLLM 59
Query: 323 LVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
LVSAF G ET Y AI H YRF+SYGD +
Sbjct: 60 LVSAFAGYPETMAAYAAAIEHGYRFFSYGDAMFI 93
>gi|254392740|ref|ZP_05007913.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces clavuligerus ATCC 27064]
gi|294811852|ref|ZP_06770495.1| tRNA ribosyltransferase-isomerase [Streptomyces clavuligerus ATCC
27064]
gi|197706400|gb|EDY52212.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces clavuligerus ATCC 27064]
gi|294324451|gb|EFG06094.1| tRNA ribosyltransferase-isomerase [Streptomyces clavuligerus ATCC
27064]
Length = 369
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 152/348 (43%), Gaps = 41/348 (11%)
Query: 23 RDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNG-----VRFC 77
RD RL+V +S + +LP L + D +V N ++ + A +NG
Sbjct: 35 RDDVRLLVSRGER-----VSHRVFGELPGLLRAGDVLVVNTSRTLPAAVNGRVQGEPVVV 89
Query: 78 HINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTG 137
H + R + + +R S R G + G RL +G
Sbjct: 90 HFSTRGDDGRWAVELRTPDGRGSSLPR-----AGGPVGAVVRLPGGERLVQEAPLSPGSG 144
Query: 138 EILLVFSISGIELERQISLVGTIPLP---PYIARKRPIDARDYVDYQTTYAKIQ----GS 190
+ + + + L+G P Y A +P+ A YQT +A+ GS
Sbjct: 145 RLWWAWVSTPVP-----ELLGRCGRPIRYGYTAGDQPLSA-----YQTVFARRSPDGSGS 194
Query: 191 VAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH-IMHSEIGFIDA 249
P+A FT ++ L+ G++ V LH G V + H + E + A
Sbjct: 195 AEMPSAARPFTERTVAALVRRGVQFAPVVLHTG--------VASAEAHEPPYPERFAVPA 246
Query: 250 PTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDIL 309
+A +N+ ++ GGRI++VGTT++R LE+AT DG++ SG+T++ I P RAVD L
Sbjct: 247 ASAWLVNAARAGGGRILAVGTTAVRALESATGADGVVREASGWTDLVIGPKRGVRAVDGL 306
Query: 310 MSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
++ H P ++ L+++ A G + Y A+ Y ++ +GD L+
Sbjct: 307 LTGLHEPAASHLLMLEAIAGRPALSRAYDEALRGLYLWHEFGDVHLVL 354
>gi|326440409|ref|ZP_08215143.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces clavuligerus ATCC 27064]
Length = 364
Score = 113 bits (282), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 152/348 (43%), Gaps = 41/348 (11%)
Query: 23 RDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNG-----VRFC 77
RD RL+V +S + +LP L + D +V N ++ + A +NG
Sbjct: 30 RDDVRLLVSRGER-----VSHRVFGELPGLLRAGDVLVVNTSRTLPAAVNGRVQGEPVVV 84
Query: 78 HINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTG 137
H + R + + +R S R G + G RL +G
Sbjct: 85 HFSTRGDDGRWAVELRTPDGRGSSLPR-----AGGPVGAVVRLPGGERLVQEAPLSPGSG 139
Query: 138 EILLVFSISGIELERQISLVGTIPLP---PYIARKRPIDARDYVDYQTTYAKIQ----GS 190
+ + + + L+G P Y A +P+ A YQT +A+ GS
Sbjct: 140 RLWWAWVSTPVP-----ELLGRCGRPIRYGYTAGDQPLSA-----YQTVFARRSPDGSGS 189
Query: 191 VAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH-IMHSEIGFIDA 249
P+A FT ++ L+ G++ V LH G V + H + E + A
Sbjct: 190 AEMPSAARPFTERTVAALVRRGVQFAPVVLHTG--------VASAEAHEPPYPERFAVPA 241
Query: 250 PTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDIL 309
+A +N+ ++ GGRI++VGTT++R LE+AT DG++ SG+T++ I P RAVD L
Sbjct: 242 ASAWLVNAARAGGGRILAVGTTAVRALESATGADGVVREASGWTDLVIGPKRGVRAVDGL 301
Query: 310 MSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
++ H P ++ L+++ A G + Y A+ Y ++ +GD L+
Sbjct: 302 LTGLHEPAASHLLMLEAIAGRPALSRAYDEALRGLYLWHEFGDVHLVL 349
>gi|302550473|ref|ZP_07302815.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces viridochromogenes DSM 40736]
gi|302468091|gb|EFL31184.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces viridochromogenes DSM 40736]
Length = 347
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 167/352 (47%), Gaps = 38/352 (10%)
Query: 19 PVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVR--- 75
P RD+ R++V S ++ H ++LP L + D +V N + + A ++G
Sbjct: 22 PGLDRDAVRMLV-----SRGTEVAHHTFTELPRVLRAWDLLVVNTSATLAAAVDGWSGHT 76
Query: 76 --FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDK 133
H + R + + +R P+ RP G + G RL V+++
Sbjct: 77 RVVVHFSTRGDDGRWAVELR-EPDGRGT-TRPRAGGPAGTEVCL---PGGVRL---VLEE 128
Query: 134 WNTG--EILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYA----KI 187
+G E L ++G + + G Y R +P+ YQT +A
Sbjct: 129 PLSGRSERLWWARVAGPGVVGLLREHGRPIRYAYTERDQPLSV-----YQTIFALPSADG 183
Query: 188 QGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH-IMHSEIGF 246
GS P+A FT+ +++ L+S G+++ VTLH G V + H + E
Sbjct: 184 AGSAEMPSAARPFTARVVAELVSRGVRLAPVTLHTG--------VASAEAHEPPYPERFA 235
Query: 247 IDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAV 306
+ +A+ +N+ K+ GGR+V+VGTT++R +E+A DG++ P +G+T + +TP R V
Sbjct: 236 VPEASARLINATKAGGGRVVAVGTTAVRAVESAAGADGVVRPRAGWTGLVVTPERGVRVV 295
Query: 307 DILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
D L++ H P+++ L+++ A G ++ Y+ A+ Y ++ +GD L+ +
Sbjct: 296 DGLLTGLHEPEASHLLMLEAVAGRVAVERGYEAALQGRYLWHEFGDVHLVLR 347
>gi|297624743|ref|YP_003706177.1| Queuosine biosynthesis protein [Truepera radiovictrix DSM 17093]
gi|297165923|gb|ADI15634.1| Queuosine biosynthesis protein [Truepera radiovictrix DSM 17093]
Length = 364
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 153/344 (44%), Gaps = 28/344 (8%)
Query: 22 PRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLN-----GVRF 76
PRD+ RL+V S P ++L FL D +V N + + A L G
Sbjct: 28 PRDAVRLLV-----STPEGHHGSCFANLANFLEPGDLLVVNRSATLPASLPAEGGFGSFV 82
Query: 77 CHINRREKEISCTLHMRVSPNSWSVYARPSKV-IKKGDILHFFSQDGQSRLEATVIDKWN 135
++ R P WS +A P + + GD++ L AT++ +
Sbjct: 83 LNLATRYGRGPNAETWLAEPR-WS-FAEPGPLPLALGDVVT------AGGLRATLVHPYP 134
Query: 136 TGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPT 195
L G ++ + +G Y+AR P+ YQT +A GS P+
Sbjct: 135 GLPRLWFVRFDG-DVGAAMQRLGAPIRYGYVARAYPL-----ATYQTLFADAPGSAEMPS 188
Query: 196 AGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQAL 255
A F+ +L L + G+ V +TLH G + + V H + E + TA A+
Sbjct: 189 AARPFSKRVLRCLAARGVGVARITLHTGVSS-LEVTEYKAARHPLPPEPFEVPPETADAV 247
Query: 256 NSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHL 315
K+ GGR+++VGTT +R LE+A DG + P GFT +++ PG VD L++ FH
Sbjct: 248 RETKAAGGRVIAVGTTVVRALESAW--DGTMKPARGFTRLYLHPGRAVNVVDGLLTGFHD 305
Query: 316 PKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
PK++ L ++ A G + Y A+ Y ++ +GD+ L+ +
Sbjct: 306 PKASHLAMLYAVAGQALVRGAYAEAVREGYLWHEFGDSHLILPR 349
>gi|167837802|ref|ZP_02464685.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia thailandensis MSMB43]
Length = 123
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 78/109 (71%), Gaps = 4/109 (3%)
Query: 255 LNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN-PWSGF---TNIFITPGYRFRAVDILM 310
++ ++RGGR+++VGTTS+R LE A + P + T+IFITPGYRFR VD L+
Sbjct: 5 VSQTRARGGRVIAVGTTSMRALEAAARDADAAGRPLAATRADTSIFITPGYRFRVVDRLV 64
Query: 311 SNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
+NFHLPKSTLLMLVSAF G+E + Y+HAI YRF+SYGD LL ++
Sbjct: 65 TNFHLPKSTLLMLVSAFAGVETIRAAYRHAIDARYRFFSYGDAMLLTRR 113
>gi|291301223|ref|YP_003512501.1| Queuosine biosynthesis protein [Stackebrandtia nassauensis DSM
44728]
gi|290570443|gb|ADD43408.1| Queuosine biosynthesis protein [Stackebrandtia nassauensis DSM
44728]
Length = 338
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 170/356 (47%), Gaps = 31/356 (8%)
Query: 6 FDFDLPPSRIALRPVFPRDSAR--LMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNN 63
F F L + A RP R S R + +++ + + +SD LP L D +V N+
Sbjct: 8 FGFALDAALEAGRPPEDRGSGRDDVRLLYTDKATGRTVSDGF-RRLPGLLRPGDLLVVND 66
Query: 64 TKVITAQLNGVRFC---HINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
+ + A + R +R + L RV + + + S I G++L
Sbjct: 67 SATLPAAVWMRRLVVHFSTDRGDGTWLVELRKRVGGH----HEQYSGGIP-GELLPL-PG 120
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
RLEA +TG + + + + + R + G Y+ R P+D Y
Sbjct: 121 GATLRLEAR-----HTGRLWI--ARMNVSVPRYLGKHGVPIRYSYVDRDWPLDR-----Y 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A GS P+A FT+ ++ RL G+ + +TLH G + +V++T
Sbjct: 169 QTVFATRPGSAEMPSAARPFTTAIVDRLRERGVTIAPITLHTGVAS---PEVDETP---- 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
+ E I A TA+A+N+ ++ GGR+++VGTT++R LETA DG++ SGFT +TP
Sbjct: 222 YPERFRIGASTARAVNAARAAGGRVIAVGTTAVRALETAVDGDGVVKAASGFTEHIVTPA 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
RAVD +++ H P+ST L ++SA + Y AI+ Y ++ +GD L+
Sbjct: 282 VGVRAVDGILTGLHEPRSTHLSMLSAIVDNDVLASAYHKAIAERYLWHEFGDVHLI 337
>gi|213581763|ref|ZP_03363589.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Typhi str. E98-0664]
Length = 332
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 94/156 (60%), Gaps = 4/156 (2%)
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFM---PVKVEDTD 236
Y++ ++K GS+ P+AG+HFT +L+ ++ G + F+TLHV + + ++ + +
Sbjct: 172 YRSVFSKKYGSLEIPSAGIHFTWDLIQKIKDKGGLISFITLHVASTEMLSNRKIQTKCVE 231
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWSGFTNI 295
+ ++ E + TA +N+ K GGRI +VGTT R LE+A + E + SG+T +
Sbjct: 232 EVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLESAYSREHNCLKASSGWTAL 291
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIE 331
+I PGY+ + VD L++N H PK+T ++L F G++
Sbjct: 292 YIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVD 327
>gi|331695034|ref|YP_004331273.1| Queuosine biosynthesis protein [Pseudonocardia dioxanivorans
CB1190]
gi|326949723|gb|AEA23420.1| Queuosine biosynthesis protein [Pseudonocardia dioxanivorans
CB1190]
Length = 355
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 154/352 (43%), Gaps = 36/352 (10%)
Query: 22 PRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINR 81
PRD RL+V + DL A L D +V N + + A + G R +
Sbjct: 23 PRDGVRLLVARAGRP----VRHRRFRDLAASLAPGDLVVVNTSTTVPAAVAGTRG---DG 75
Query: 82 REKEISCTLHMRVSPNSWSVY-----------ARPSKVIKKGDILHFFSQDGQSRLEATV 130
R + + + +P+ W V RP +V+ H L AT
Sbjct: 76 RPVVLHVSGPVPGAPDRWVVELRTPGRERVHDGRPGEVVTLPAGAHAVLVAAHPDLGATT 135
Query: 131 IDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAK-IQG 189
W ++ G L + L G PY+ PI+A ++T A+ ++G
Sbjct: 136 SRLWRA---IVETGTPGRGLADWLELHGRPITYPYLGTVPPIEA-----FRTVLARPVRG 187
Query: 190 SVAA--PTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFI 247
+A P+AG FT +L RL + G+ V + LH G V + + + +
Sbjct: 188 FASAEMPSAGRPFTGAVLDRLAARGVGVAELVLHTG------VSSPEVGEPPLPERF-RV 240
Query: 248 DAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVD 307
A TA A+N ++ GGR+V+VGTT R LET EDG + SG+T++ + P R
Sbjct: 241 PARTADAVNRTRAVGGRVVAVGTTVTRALETVADEDGTVRAGSGWTDLVLGPHRPARVTT 300
Query: 308 ILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
L++ +H P+++ L+L+ A G E Y A++ Y ++ +GD+ LL +
Sbjct: 301 GLVTGWHEPQASHLLLLEAVAGRELVAAAYGAALAEGYLWHEFGDSCLLLPR 352
>gi|111017236|ref|YP_700208.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhodococcus
jostii RHA1]
gi|110816766|gb|ABG92050.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhodococcus
jostii RHA1]
Length = 352
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 165/365 (45%), Gaps = 33/365 (9%)
Query: 5 EFDFDLPPSRIALRPV----FPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
EF F LP A P RDS R++V + DLP FL D +V
Sbjct: 11 EFRFVLPQRLEASGPPESRGLLRDSVRMLVSDRGR-----VEHSRFHDLPRFLRPGDVVV 65
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYAR-PSKVIKKGDILHFFS 119
N + + A ++G + ++ W+V R P V D + +
Sbjct: 66 VNASSTLAAAVDGTVDA-----VGPVVVHFSTDLADGDWAVEVRAPGPVSGALDTIAAGT 120
Query: 120 QDGQSR-LEATVIDKWNTGEI-LLVFSISGIELERQISLVGTIPLP---PYIARKRPIDA 174
+ R + AT++ W G L SI G+ + L+ T P Y+ + P+ +
Sbjct: 121 RIILPRGVVATLVKPWPLGSTRLWRASIDGVA-DVAAELLATSGRPITYAYVHERWPLSS 179
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
YQT + + GS +A FT ++++ L + G+ V + LH G + P + E
Sbjct: 180 -----YQTIFGRTGGSAEMASAARPFTHSMVTDLATSGVVVAPILLHTGVSS--PERGEP 232
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
+ TA+ +N ++ GGR+++VGTT R LETA T G+ +G+T+
Sbjct: 233 PIPERFE-----VPEQTARLVNDRRAAGGRVIAVGTTVTRALETAATSGGMAVAGAGWTD 287
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
+ ++ G VD L++ +H P ++ LML+ + G + ++ Y A++ Y ++ +GD++
Sbjct: 288 LVLSAGRPTLVVDGLITGWHAPGASHLMLLESVVGEKAVRRAYDEALARGYLWHEFGDSA 347
Query: 355 LLFQK 359
LL ++
Sbjct: 348 LLLRR 352
>gi|145631081|ref|ZP_01786856.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae R3021]
gi|144983366|gb|EDJ90848.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae R3021]
Length = 120
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 73/108 (67%), Gaps = 6/108 (5%)
Query: 255 LNSVKSRGGRIVSVGTTSLRLLETAT---TEDG---IINPWSGFTNIFITPGYRFRAVDI 308
L+ K G R+++VGTTS+R +E+A E G +I P+ T+IFI PG +FR VD
Sbjct: 3 LSQQKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSDTSIFIYPGKKFRVVDC 62
Query: 309 LMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
L++NFHLP+STL+MLVSAF G + T Y+HA+ YRF+SYGD +
Sbjct: 63 LITNFHLPESTLIMLVSAFAGYKNTMNAYKHAVQEKYRFFSYGDAMFI 110
>gi|226359753|ref|YP_002777531.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Rhodococcus opacus B4]
gi|226238238|dbj|BAH48586.1| putative S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Rhodococcus opacus B4]
Length = 352
Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 164/376 (43%), Gaps = 51/376 (13%)
Query: 3 VKEFDFDLPPSRIALRP----VFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDA 58
V EF F LP A P RDS +L+V + LV S DLP FL S D
Sbjct: 9 VTEFRFVLPQRLEASGPPEERGLLRDSVKLLV---SDRGNLVHST--FHDLPHFLRSGDV 63
Query: 59 IVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
+V N + + A ++G + + W++ R ++ L
Sbjct: 64 VVVNASATLAAAVDGTVDT-----VGPVVVHFSTELEGGEWALEVRAPGLVSGA--LDSV 116
Query: 119 SQDGQSRLE----ATVIDKWNTGEI-LLVFSISGIELERQISLVGTIPLP---PYIARKR 170
+ RL AT+ + W G L SI G+ + L+ T P YI +
Sbjct: 117 GAGVRIRLSRGAVATLHEPWPRGSTRLWRASIDGVA-DVAAELLATAGRPITYAYIHDRW 175
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
P+ YQT + + GS +A FT +++ L + G+ + LH G + P
Sbjct: 176 PLGY-----YQTIFGRTGGSAEMASAARPFTHPIVTELATSGVVTAPILLHTGVSS--PE 228
Query: 231 KVE-------DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED 283
+ E D +H TA+ +N ++ GGR+++VGTT R LET T D
Sbjct: 229 RGEPPIPERYDVPEH------------TARLINDRRAEGGRVIAVGTTVTRALETRATPD 276
Query: 284 GIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISH 343
G+ G+TN+ ++ R VD L++ +H P ++ LML+ + G ++ Y A++
Sbjct: 277 GLAVAGGGWTNLVLSARRPARVVDGLITGWHAPGASHLMLLESVVGAAAVRRAYDEALAR 336
Query: 344 AYRFYSYGDTSLLFQK 359
Y ++ +GD++LL ++
Sbjct: 337 GYLWHEFGDSALLLRR 352
>gi|326780149|ref|ZP_08239414.1| Queuosine biosynthesis protein [Streptomyces cf. griseus XylebKG-1]
gi|326660482|gb|EGE45328.1| Queuosine biosynthesis protein [Streptomyces cf. griseus XylebKG-1]
Length = 440
Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 160/357 (44%), Gaps = 51/357 (14%)
Query: 23 RDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVR-----FC 77
RD RL+V + C +S H +LP + + D +V N + + A +NG
Sbjct: 98 RDDVRLLV---SRGC--AVSHHAFRELPGQVRAGDVLVVNTSMTLPAAVNGRVGGERVVV 152
Query: 78 HINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTG 137
H + R + + +R + + RP G ++ A V+++
Sbjct: 153 HFSTRGADGRWAVELRAPGRAGATGPRPGG--PAGAVVRLPGG------RALVLEE---- 200
Query: 138 EILLVFSISGIEL------ERQISLVGTIPLP---PYIARKRPIDARDYVDYQTTYAKIQ 188
+ ++G L ER L+ P Y R +P+ A V + T
Sbjct: 201 ---PLGPVAGARLWWARTPERVPELLRRYGRPIRYGYTERDQPLSAYRTV-FATPSPDGS 256
Query: 189 GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH-IMHSEIGFI 247
GS P+AG FT+ L++ L+ G+ ++LH G V + H + E +
Sbjct: 257 GSAEMPSAGRPFTAALVAGLVRRGVLFAPLSLHTG--------VASAEAHEPPYPERFAV 308
Query: 248 DAPTAQALNSVKSR-------GGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
A TA +N+V++ GGR+++VGTT++R LE+A DG++ G+T++ +TP
Sbjct: 309 PAATAWLVNAVRAARGGDRAAGGRVIAVGTTAVRALESAAGADGVVRQAEGWTDLVVTPR 368
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
R VD L++ H P+++ L+++ A G E + Y+ A+ Y ++ +GD L+
Sbjct: 369 RGVRVVDGLLTGLHEPEASHLLMLEAVAGREALRLGYEAALQERYLWHEFGDVHLIL 425
>gi|182439485|ref|YP_001827204.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces griseus subsp. griseus NBRC 13350]
gi|178468001|dbj|BAG22521.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces griseus subsp. griseus NBRC 13350]
Length = 440
Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 160/357 (44%), Gaps = 51/357 (14%)
Query: 23 RDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVR-----FC 77
RD RL+V + C +S H +LP + + D +V N + + A +NG
Sbjct: 98 RDDVRLLV---SRGC--AVSHHAFRELPGQVRAGDVLVVNTSMTLPAAVNGRVGGERVVV 152
Query: 78 HINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTG 137
H + R + + +R + + RP G ++ A V+++
Sbjct: 153 HFSTRGADGRWAVELRAPGRAGATGPRPGG--PAGAVVRLPGG------RALVLEE---- 200
Query: 138 EILLVFSISGIEL------ERQISLVGTIPLP---PYIARKRPIDARDYVDYQTTYAKIQ 188
+ ++G L ER L+ P Y R +P+ A V + T
Sbjct: 201 ---PLGPVAGARLWWARTPERVPELLRRYGRPIRYGYTERDQPLSAYRTV-FATPSQDGS 256
Query: 189 GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH-IMHSEIGFI 247
GS P+AG FT+ L++ L+ G+ ++LH G V + H + E +
Sbjct: 257 GSAEMPSAGRPFTAALVAGLVRRGVLFAPLSLHTG--------VASAEAHEPPYPERFAV 308
Query: 248 DAPTAQALNSVKSR-------GGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
A TA +N+V++ GGR+++VGTT++R LE+A DG++ G+T++ +TP
Sbjct: 309 PAATAWLVNAVRAARGGDRAAGGRVIAVGTTAVRALESAAGADGVVRQAEGWTDLVVTPR 368
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
R VD L++ H P+++ L+++ A G E + Y+ A+ Y ++ +GD L+
Sbjct: 369 RGVRVVDGLLTGLHEPEASHLLMLEAVAGREALRLGYEAALQERYLWHEFGDVHLIL 425
>gi|239932119|ref|ZP_04689072.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces ghanaensis ATCC 14672]
gi|291440489|ref|ZP_06579879.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces ghanaensis ATCC 14672]
gi|291343384|gb|EFE70340.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces ghanaensis ATCC 14672]
Length = 377
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 109/200 (54%), Gaps = 18/200 (9%)
Query: 165 YIARKRPIDARDYVDYQTTYA----KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTL 220
Y R +P+ A YQT +A + GS P+AG FT+ +++ L+S G++ V L
Sbjct: 178 YTERDQPLSA-----YQTVFALPSPEGTGSAEMPSAGRPFTARMVAELVSRGVQFAPVVL 232
Query: 221 HVGAGTFMPVKVEDTDDH-IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA 279
H G V + H + E + +A+ + +V++ GGR+++VGTT++R +E+A
Sbjct: 233 HAG--------VASAEAHEPPYPERFVVPEASARLVGAVRAGGGRVIAVGTTAVRAVESA 284
Query: 280 TTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQH 339
DG++ +G+T++ +TP R VD L++ H P+++ L+++ A G + Y+
Sbjct: 285 AGADGVVRARAGWTDLVVTPERGVRVVDGLLTGLHEPEASHLLMLEAVAGRAAVDRGYEE 344
Query: 340 AISHAYRFYSYGDTSLLFQK 359
A+ Y ++ +GD L+ +
Sbjct: 345 ALHGRYLWHEFGDVHLVLPE 364
>gi|284989128|ref|YP_003407682.1| Queuosine biosynthesis protein [Geodermatophilus obscurus DSM
43160]
gi|284062373|gb|ADB73311.1| Queuosine biosynthesis protein [Geodermatophilus obscurus DSM
43160]
Length = 339
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 153/367 (41%), Gaps = 61/367 (16%)
Query: 11 PPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQ 70
PP R L RD RLM V P + ++ DLP L D +V N + + A+
Sbjct: 13 PPERRGLA----RDGVRLMAVRPGGT-----TETTFRDLPELLEPGDLVVVNTSATLPAR 63
Query: 71 LNGVRFCHINRREKEISCTLHMRVS--PNSWSVYAR------PSKVIKKGDILH------ 116
L+ RR + LH+ + W V R P + ++ G +L
Sbjct: 64 LDA-------RRADGVRAPLHVSTALDDGDWVVELRRPDNDGPDRGVEPGTVLDLPGRVR 116
Query: 117 ------FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKR 170
F + SRL D LL + I R L +PL
Sbjct: 117 LRLLEGFPAPARASRLWRARPDPDVAVAELLRRHGTPI---RYGHLSAAVPL-------- 165
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
+ Q YA GS +AG FT +L RL++ G+ V V LH G V
Sbjct: 166 -------AEAQNVYATEPGSAENASAGRPFTDRVLVRLMARGVPVVPVVLHAG------V 212
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWS 290
+ + M + TA+ +N+ ++ G R+V+VGTT R LETAT EDG+ +
Sbjct: 213 SSPELHEPPMPERYRVPEV-TARLVNATRAAGSRVVAVGTTVTRALETATGEDGVTRAAA 271
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G+T++ + P RAV L++ H P ++ L+L+ A G E + Y A + Y ++ +
Sbjct: 272 GWTDLVLGPDRPARAVSGLLTGLHAPDASHLLLLEAVAGRELVDEAYARAAAGGYLWHEF 331
Query: 351 GDTSLLF 357
GDT L
Sbjct: 332 GDTMLFL 338
>gi|315931775|gb|EFV10730.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni 327]
Length = 130
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/139 (46%), Positives = 85/139 (61%), Gaps = 10/139 (7%)
Query: 220 LHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET- 278
+HVGAGTF V+ E+ +H MHSE F + P QA + S+ I+ VGTT R +E
Sbjct: 1 MHVGAGTFKSVECENIQEHKMHSE--FFNIP-QQACEIIDSKQA-ILGVGTTVTRTIEYY 56
Query: 279 ATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQ 338
A T+ SGF ++F+ P + L++NFHLPKSTL+MLVSAF G E+ K+Y+
Sbjct: 57 ARTKTK-----SGFCDLFLHPQNPPIRQNHLLTNFHLPKSTLIMLVSAFIGREQCLKLYE 111
Query: 339 HAISHAYRFYSYGDTSLLF 357
AI YRFYSYGD L+
Sbjct: 112 LAIKEKYRFYSYGDAMLIL 130
>gi|29833016|ref|NP_827650.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces avermitilis MA-4680]
gi|29610137|dbj|BAC74185.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces avermitilis MA-4680]
Length = 410
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 169/374 (45%), Gaps = 64/374 (17%)
Query: 19 PVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNG----V 74
P RDS RL+V S +S H +LP L + D +V N + + A ++G
Sbjct: 30 PGLDRDSVRLLV-----SRGTEVSHHDFVELPRQLRAGDLLVVNTSPTLAAAVDGRIGHA 84
Query: 75 RFC-HINRREKEISCTLHMRVSPNSWSVYAR---PSKV-IKKGDILHFFSQD---GQS-R 125
R H + R ++ + +R + AR P+ ++ D + ++ G+S R
Sbjct: 85 RVVVHFSTRGEDGRWAVELRDPDGRGTTRARTGGPAGTEVRLPDGVRLVLEEPLAGRSER 144
Query: 126 LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYA 185
L + ++ ++ G R I Y R +P+ YQT +A
Sbjct: 145 LWWARVSAPGDADVTVLLRGHG----RPIRYS-------YTERDQPLSV-----YQTVFA 188
Query: 186 ----KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH-IM 240
GS P+A FT+ L++ L+S G++ +TLH G V + H
Sbjct: 189 LPSADGAGSAEMPSAARPFTARLVAELVSRGVQFAPITLHTG--------VASAEAHEPP 240
Query: 241 HSEIGFIDAPTAQALNSVKS-----------------RGGRIVSVGTTSLRLLETATTED 283
+ E + +A+ +N+ ++ GGR+++VGTT++R +E+AT D
Sbjct: 241 YPERFAVPEASARLINAARAHRTPREASSSRGGDGSREGGRVIAVGTTAVRAVESATGTD 300
Query: 284 GIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISH 343
G++ P G+T++ +TP RAVD L++ H P+++ L+++ A G + Y+ A++
Sbjct: 301 GVVRPAEGWTDLVVTPERGVRAVDGLLTGLHEPEASHLLMLEALAGRTAIDRSYEEALAG 360
Query: 344 AYRFYSYGDTSLLF 357
Y ++ +GD L+
Sbjct: 361 LYLWHEFGDLHLIL 374
>gi|284028027|ref|YP_003377958.1| Queuosine biosynthesis protein [Kribbella flavida DSM 17836]
gi|283807320|gb|ADB29159.1| Queuosine biosynthesis protein [Kribbella flavida DSM 17836]
Length = 344
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 110/202 (54%), Gaps = 16/202 (7%)
Query: 165 YIARK-RPIDARDYVD-------YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVY 216
Y+ R RPI + YVD YQT +A GS P+AG F+ L+S+L + G+ +
Sbjct: 150 YLRRHGRPITYQ-YVDQQWPLALYQTVFANQPGSAEMPSAGRPFSFELVSQLAAAGVLIA 208
Query: 217 FVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLL 276
+ LH G + E + + +E + TA+ +N VKS GGR+++VGTT++R +
Sbjct: 209 PILLHCGVSSL-----ESHEPPL--AERYAVPEHTARLVNWVKSTGGRVIAVGTTAVRAI 261
Query: 277 ETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKM 336
ETA G + SG+T++ ++P VD L++ H P+++ L+L+ + G E +
Sbjct: 262 ETAALPSGSVVASSGWTDLVLSPERPTAVVDGLITGMHAPEASHLLLLESVVGGEAVQHA 321
Query: 337 YQHAISHAYRFYSYGDTSLLFQ 358
Y A+ Y ++ +GDT LL +
Sbjct: 322 YDAALDRGYLWHEFGDTCLLLR 343
>gi|47094637|ref|ZP_00232269.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes str. 4b H7858]
gi|47016987|gb|EAL07888.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes str. 4b H7858]
Length = 174
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 98/186 (52%), Gaps = 16/186 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++LN DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKKSGD---IKDQHFTDIISYLNEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G++ + I L + N+W +P+K I+KG + F
Sbjct: 58 LNDTRVLPARLHGIK----DETGAHIEVLLLKQKEGNAWETLVKPAKRIRKGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A +++ G +L FS GI E + +G +PLPPYI + R Y
Sbjct: 111 -GDGALKAICLEELEHGGRILEFSYEGIFYEV-LEQLGEMPLPPYIKEQLADQDR----Y 164
Query: 181 QTTYAK 186
QT YAK
Sbjct: 165 QTVYAK 170
>gi|153877504|ref|ZP_02004263.1| S-adenosylmethionine [Beggiatoa sp. PS]
gi|152066032|gb|EDN65737.1| S-adenosylmethionine [Beggiatoa sp. PS]
Length = 95
Score = 103 bits (257), Expect = 4e-20, Method: Composition-based stats.
Identities = 46/80 (57%), Positives = 60/80 (75%), Gaps = 1/80 (1%)
Query: 273 LRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEE 332
+R LETA+T G+I P+ G T +FITPGY F+ VD L++NFHLP+STLLMLV AF G +
Sbjct: 1 MRALETASTS-GVIKPYEGETRLFITPGYHFQTVDALLTNFHLPESTLLMLVCAFAGQAQ 59
Query: 333 TKKMYQHAISHAYRFYSYGD 352
Y+HA++ YRF+SYGD
Sbjct: 60 VLDAYRHAVAQHYRFFSYGD 79
>gi|15614774|ref|NP_243077.1| S-adenosylmethionine tRNA ribosyltransferase [Bacillus halodurans
C-125]
gi|10174830|dbj|BAB05930.1| S-adenosylmethionine tRNA ribosyltransferase [Bacillus halodurans
C-125]
Length = 336
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 138/307 (44%), Gaps = 28/307 (9%)
Query: 52 FLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKK 111
+L D +V N ++ I ++L G + + I L W S +
Sbjct: 52 YLQQGDVLVLNRSRTIPSRLIG------SLHGETIELRLSHERRDGLWDGLILSSSELHA 105
Query: 112 GDILHFFSQDGQSRLEATVIDK-WNTGEILLVFSISGIELERQISLVGTIPLPPYIARKR 170
GD + F S S L AT+I+K +T + FS G +L + G YI
Sbjct: 106 GDRI-FLS----SSLSATLIEKDEHTPLWRVAFSKRGAQLLEYVYRYGEPIGYEYIKSSL 160
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
I DYQT Y+ GSV +AG FT LL+RL G+++ F+ LH G +
Sbjct: 161 SIQ-----DYQTVYSSAPGSVEMCSAGRPFTWQLLARLKQKGVRIAFLELHTGLSYYEND 215
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWS 290
D H H I + + +K +G RI++VGTT +R LET N
Sbjct: 216 VWPDPAHHPEHYHI------PKETIEELK-KGKRIIAVGTTVVRALETYAQ----TNRSQ 264
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G T + I GY + L++ FH P+++ L +++AF +E ++Y+ AI Y+++ +
Sbjct: 265 GTTTLSIDAGYELQLATGLLTGFHEPQASHLHMLAAFVQEQELFRVYEQAIRQGYQWHEF 324
Query: 351 GDTSLLF 357
GD + +
Sbjct: 325 GDVNFIL 331
>gi|237755939|ref|ZP_04584528.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sulfurihydrogenibium yellowstonense SS-5]
gi|237691888|gb|EEP60907.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sulfurihydrogenibium yellowstonense SS-5]
Length = 190
Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 99/215 (46%), Gaps = 33/215 (15%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+ LP IA P PRDS RLMV+ I + D+ +L D +V
Sbjct: 1 MKLSDFDYHLPKELIAKYPAQPRDSCRLMVLDRKDKT---IEHRIFRDVIDYLKPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGD------- 113
NNTKVI A+L G + + I L + N W + + +KK
Sbjct: 58 LNNTKVIPARLIGKK----EKTNANIEVFLLRPIEDNIWEALIKNVRRLKKNQKIIISDD 113
Query: 114 -ILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
+ F S+D + + I +++ + G IPLPPYI R+
Sbjct: 114 FYVEFLSKDDEK----------------AIVKIHSKDIKSDLEKYGHIPLPPYIEREDEE 157
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSR 207
+DY YQT +A+ +GSVA+PTAGLHFT LL +
Sbjct: 158 KDKDY--YQTVFAEKEGSVASPTAGLHFTKELLEK 190
>gi|284098483|ref|ZP_06385888.1| S-adenosylmethionine tRNA-ribosyltransferase-isomerase [Candidatus
Poribacteria sp. WGA-A3]
gi|283830538|gb|EFC34711.1| S-adenosylmethionine tRNA-ribosyltransferase-isomerase [Candidatus
Poribacteria sp. WGA-A3]
Length = 85
Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/84 (55%), Positives = 61/84 (72%)
Query: 273 LRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEE 332
+R LE+A E G I P G T +FITPG+RF VD L++NFHLP++TLLMLVSAF G+++
Sbjct: 1 MRTLESAIDEAGKIRPGPGETRLFITPGFRFTMVDALLTNFHLPRTTLLMLVSAFGGLDQ 60
Query: 333 TKKMYQHAISHAYRFYSYGDTSLL 356
+ Y AI+ YRFYSYGD L+
Sbjct: 61 LRAAYAEAITARYRFYSYGDAMLI 84
>gi|290961493|ref|YP_003492675.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces scabiei 87.22]
gi|260651019|emb|CBG74137.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces scabiei 87.22]
Length = 384
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 105/198 (53%), Gaps = 18/198 (9%)
Query: 165 YIARKRPIDARDYVDYQTTYA----KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTL 220
Y R +P+ YQT +A GS P+AG FT+ +++ L+S G++ VTL
Sbjct: 181 YTERDQPLSV-----YQTVFALPSQDGAGSAEMPSAGRPFTARMVAELVSRGVQFAPVTL 235
Query: 221 HVGAGTFMPVKVEDTDDH-IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA 279
H G V + H + E + +A+ +N+ ++ G R+++VGTT++R +E+A
Sbjct: 236 HTG--------VASAEAHEPPYPERFSVPEASARLVNAARAGGRRVIAVGTTAVRAVESA 287
Query: 280 TTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQH 339
DG++ G+T++ +TP R VD L++ H P+++ L+++ A G + Y+
Sbjct: 288 AGPDGVVRARDGWTDLVVTPERGVRVVDGLLTGLHEPEASHLLMLEAVAGRAAIDRSYEA 347
Query: 340 AISHAYRFYSYGDTSLLF 357
A+ Y ++ +GD L+
Sbjct: 348 AVEGRYLWHEFGDVHLVL 365
>gi|167920404|ref|ZP_02507495.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei BCC215]
Length = 89
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 54/67 (80%)
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFITPGYRFR VD L++NFHLPKSTLLMLVSAF GIE + Y+HAI YRF+SYGD
Sbjct: 12 TDIFITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGIETIRAAYRHAIDARYRFFSYGD 71
Query: 353 TSLLFQK 359
LL ++
Sbjct: 72 AMLLTRR 78
>gi|213585165|ref|ZP_03366991.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhi str. E98-0664]
Length = 86
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 50/86 (58%), Positives = 62/86 (72%), Gaps = 2/86 (2%)
Query: 158 GTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYF 217
G +PLPPYI RP + D YQT Y++ G+VAAPTAGLHF LL+ L G+++ F
Sbjct: 1 GHMPLPPYI--DRPDENADRELYQTVYSEKPGAVAAPTAGLHFDEPLLAALREKGVEMAF 58
Query: 218 VTLHVGAGTFMPVKVEDTDDHIMHSE 243
VTLHVGAGTF PV+V+ +DHIMHSE
Sbjct: 59 VTLHVGAGTFQPVRVDTIEDHIMHSE 84
>gi|167912449|ref|ZP_02499540.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 112]
Length = 87
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 54/67 (80%)
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFITPGYRFR VD L++NFHLPKSTLLMLVSAF GIE + Y+HAI YRF+SYGD
Sbjct: 10 TDIFITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGIETIRAAYRHAIDARYRFFSYGD 69
Query: 353 TSLLFQK 359
LL ++
Sbjct: 70 AMLLTRR 76
>gi|167904190|ref|ZP_02491395.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei NCTC 13177]
Length = 97
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 54/67 (80%)
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFITPGYRFR VD L++NFHLPKSTLLMLVSAF GIE + Y+HAI YRF+SYGD
Sbjct: 20 TDIFITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGIETIRAAYRHAIDARYRFFSYGD 79
Query: 353 TSLLFQK 359
LL ++
Sbjct: 80 AMLLTRR 86
>gi|167825728|ref|ZP_02457199.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 9]
Length = 88
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 54/67 (80%)
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFITPGYRFR VD L++NFHLPKSTLLMLVSAF GIE + Y+HAI YRF+SYGD
Sbjct: 11 TDIFITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGIETIRAAYRHAIDARYRFFSYGD 70
Query: 353 TSLLFQK 359
LL ++
Sbjct: 71 AMLLTRR 77
>gi|239940283|ref|ZP_04692220.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces roseosporus NRRL 15998]
gi|239986764|ref|ZP_04707428.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces roseosporus NRRL 11379]
gi|291443716|ref|ZP_06583106.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces roseosporus NRRL 15998]
gi|291346663|gb|EFE73567.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces roseosporus NRRL 15998]
Length = 391
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 105/199 (52%), Gaps = 19/199 (9%)
Query: 165 YIARKRPIDARDYVDYQTTYA----KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTL 220
Y R +P+ A Y+T +A GS P+A FT L++ L+ G+ + L
Sbjct: 191 YTDRDQPLSA-----YRTVFAVDSPDGGGSAEMPSAARPFTVPLVAELVRRGVLFAPLFL 245
Query: 221 HVGAGTFMPVKVEDTDDH-IMHSEIGFIDAPTAQALNSVKSRG-GRIVSVGTTSLRLLET 278
H G V + H + E + A TA +N+V++ G GR+++VGTT++R LE+
Sbjct: 246 HTG--------VASAESHEPPYPERFAVPAATAWLVNAVRAAGSGRVIAVGTTAVRALES 297
Query: 279 ATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQ 338
A DG++ P G+T++ +TP R VD L++ H P+++ L+++ A G E + Y+
Sbjct: 298 AAGADGVVRPAEGWTDLVVTPRRGVRVVDGLLTGLHEPRASHLLMLEAVAGREALRHGYE 357
Query: 339 HAISHAYRFYSYGDTSLLF 357
A+ Y ++ +GD L+
Sbjct: 358 AALQERYLWHEFGDVHLIL 376
>gi|167895802|ref|ZP_02483204.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 7894]
Length = 79
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 54/67 (80%)
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFITPGYRFR VD L++NFHLPKSTLLMLVSAF GIE + Y+HAI YRF+SYGD
Sbjct: 2 TDIFITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGIETIRAAYRHAIDARYRFFSYGD 61
Query: 353 TSLLFQK 359
LL ++
Sbjct: 62 AMLLTRR 68
>gi|225164099|ref|ZP_03726381.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Opitutaceae bacterium TAV2]
gi|224801305|gb|EEG19619.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Opitutaceae bacterium TAV2]
Length = 162
Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 90/158 (56%), Gaps = 13/158 (8%)
Query: 130 VIDKWNTGEILLVFSI--SGIELERQISLVGTIPLPPYIARKRPID------ARDYVDYQ 181
V++K G L+ F++ G + + +G +PLPPYIAR + ARD YQ
Sbjct: 2 VLEKDGEGAALVRFTMPGGGGSITEIANRLGDVPLPPYIARGGDAEGRAEERARDIERYQ 61
Query: 182 TTYAKI--QGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
T YA Q +VAAPTAGLHFT LL++L G+ +TLHVG GTF P+ ++H
Sbjct: 62 TVYADRTRQVAVAAPTAGLHFTPELLAQLAGQGVGTADITLHVGLGTFKPIATATIEEHP 121
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE 277
+H EI I T +AL + GR ++VGTT++R +E
Sbjct: 122 IHREIYEIPPATQRALLAPA---GRRIAVGTTTVRTVE 156
>gi|167847216|ref|ZP_02472724.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei B7210]
Length = 92
Score = 99.8 bits (247), Expect = 6e-19, Method: Composition-based stats.
Identities = 46/67 (68%), Positives = 54/67 (80%)
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFITPGYRFR VD L++NFHLPKSTLLMLVSAF GIE + Y+HAI YRF+SYGD
Sbjct: 15 TDIFITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGIETIRAAYRHAIDARYRFFSYGD 74
Query: 353 TSLLFQK 359
LL ++
Sbjct: 75 AMLLTRR 81
>gi|167564027|ref|ZP_02356943.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia oklahomensis EO147]
Length = 94
Score = 99.4 bits (246), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 55/67 (82%)
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFITPGYRFR VD L++NFHLPKSTLLMLVSAF G++ + Y+HAI+ YRF+SYGD
Sbjct: 24 TDIFITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVDTIRAAYRHAIAARYRFFSYGD 83
Query: 353 TSLLFQK 359
LL ++
Sbjct: 84 AMLLTRR 90
>gi|34763570|ref|ZP_00144505.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium nucleatum subsp. vincentii ATCC 49256]
gi|27886759|gb|EAA23897.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium nucleatum subsp. vincentii ATCC 49256]
Length = 222
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 113/214 (52%), Gaps = 26/214 (12%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
++D+ LP I +P PRDSA+LM++ I ++ +L D +V N T
Sbjct: 15 DYDYFLPEELIGQKPREPRDSAKLMLIDRKTGS---IEHKHFYNIVDYLQKGDVLVRNAT 71
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHM----RVSPNSWSVYARPSKVIKKGDILHFFSQ 120
KVI A++ F H K+ L + R+S ++W +P+K +K G L+
Sbjct: 72 KVIPARI----FGH-----KDTGGVLEILLIKRISLDTWECLLKPAKKLKLGQKLYI--- 119
Query: 121 DGQSR-LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G+++ L A +++ G +L F G E + +G++PLPPYI RK ++ +D
Sbjct: 120 -GENKELIAELLEIKEDGNRILKFYYEG-SFEEILDKLGSMPLPPYITRK--LENKD--R 173
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGI 213
YQT YA+ SVAAPTAGLHFT LL +++ G+
Sbjct: 174 YQTVYAQRGESVAAPTAGLHFTEELLKKILDKGV 207
>gi|239978745|ref|ZP_04701269.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces albus J1074]
Length = 304
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 104/200 (52%), Gaps = 18/200 (9%)
Query: 165 YIARKRPIDARDYVDYQTTYAKIQ----GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTL 220
Y R +P+ A Y+T +A GS P+AG FT+ ++ L+ G++ VTL
Sbjct: 117 YTERDQPLAA-----YRTVFAAAGEDGGGSAEMPSAGRPFTARTVTELVRAGVQFAPVTL 171
Query: 221 HVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQAL-NSVKSRGGRIVSVGTTSLRLLETA 279
H G V + H + +P A L N+V++ GGR+++VGTT++R LE+A
Sbjct: 172 HTG--------VASVEAHEPPYPERYAVSPHAAWLVNAVRAGGGRVIAVGTTAVRALESA 223
Query: 280 TTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQH 339
DG + SG+T + +TP R VD L++ H P+++ L+++ A G ++ Y
Sbjct: 224 VGPDGRLRAASGWTGLVVTPERGVRVVDGLLTGLHEPEASHLLMLEAVAGAAAVERGYAA 283
Query: 340 AISHAYRFYSYGDTSLLFQK 359
A+ ++ +GD LL ++
Sbjct: 284 AVRARLLWHEFGDVHLLTRR 303
>gi|295093023|emb|CBK82114.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Coprococcus sp. ART55/1]
Length = 209
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 96/216 (44%), Gaps = 21/216 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F +DLP IA P+ R +RLMV+ + I D+ +LN D +V
Sbjct: 1 MKLTDFYYDLPQELIAQDPLLKRSESRLMVLDRKDN---TIEHKHFYDVIDYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L GV+ I L R +W +P K K G + F S+
Sbjct: 58 INDTRVLPARLMGVK----EDTGASIEVLLLKRKDDCTWETLVKPGKKCKVGARIVFGSE 113
Query: 121 DGQ---------SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRP 171
+ +L V+D G L+ F GI E + +G +PLPPYI K
Sbjct: 114 SNEPDPETGLIKGKLVGEVVDIVEEGNRLIRFEFDGI-FEEILDELGQMPLPPYITHK-- 170
Query: 172 IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSR 207
D YQT YA+ GS AAPT + LSR
Sbjct: 171 --LEDKNRYQTVYAEHDGSAAAPTPDCILQQSFLSR 204
>gi|289810777|ref|ZP_06541406.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Typhi str. AG3]
Length = 272
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 82/138 (59%), Gaps = 4/138 (2%)
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFM---PVKVEDTD 236
Y++ ++K GS+ P+AG+HFT +L+ ++ G + F+TLHV + + ++ + +
Sbjct: 135 YRSVFSKKYGSLEIPSAGIHFTWDLIQKIKDKGGLISFITLHVASTEMLSNRKIQTKCVE 194
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWSGFTNI 295
+ ++ E + TA +N+ K GGRI +VGTT R LE+A + E + SG+T +
Sbjct: 195 EVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLESAYSREHNCLKASSGWTAL 254
Query: 296 FITPGYRFRAVDILMSNF 313
+I PGY+ + VD L++N
Sbjct: 255 YIHPGYQLKVVDCLLTNL 272
>gi|15594367|ref|NP_212155.1| S-adenosylmethionine: tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi B31]
gi|2687901|gb|AAC66411.1| S-adenosylmethionine: tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi B31]
Length = 215
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 117/238 (49%), Gaps = 32/238 (13%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF F+L S I P R S+RL+V+ P L + + V+++ ++NSN +
Sbjct: 4 MKTKEFHFNLSHSLIEQYPSEKRGSSRLIVLDPQLQK--IYHKNSVNNILKYINSN---I 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHM----RVSPNSWSVYARPSKVIKKGDILH 116
FNN+K +++ E E+S + R+ N ++ SK G+
Sbjct: 59 FNNSKARKSRIYA---------ESEMSSNVEFLILDRIDTNLFTALVSKSKKQIIGNFYK 109
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIE--LERQISLVGTIPLPPYIARKRPIDA 174
F +G L ++ K N+ E++L F+ + E E+ +PLP YI KR D
Sbjct: 110 F--PEG---LMDEILSK-NSSEVVLKFNNNVGEDYFEKHC----FVPLPSYI--KRDYDK 157
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D YQT Y+K GS A+ TAGLHF+ +L S + I+ F+TLHVGA F K+
Sbjct: 158 IDEDRYQTIYSKYVGSTASATAGLHFSRDLFSAFENNNIEYDFITLHVGAWDFSSCKI 215
>gi|47094202|ref|ZP_00231917.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
H7858]
gi|47017429|gb|EAL08247.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
H7858]
Length = 91
Score = 89.4 bits (220), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Query: 276 LET-ATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETK 334
LET A+ DG + SG+T IFI+PGY FRAVD L++NFHLPKSTL+MLVSA +
Sbjct: 9 LETIASRHDGKLVAESGWTEIFISPGYTFRAVDALITNFHLPKSTLIMLVSALSDRTKIL 68
Query: 335 KMYQHAISHAYRFYSYGD 352
Y HA+ YRF+S+GD
Sbjct: 69 AAYNHAVEEQYRFFSFGD 86
>gi|149919287|ref|ZP_01907769.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Plesiocystis pacifica SIR-1]
gi|149819787|gb|EDM79211.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Plesiocystis pacifica SIR-1]
Length = 304
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 93/180 (51%), Gaps = 7/180 (3%)
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVG-AGTFMPVKVEDTDDH 238
+QT +A + P+AG +++LL +L + G+ V +T G + T P + D
Sbjct: 126 FQTVFAGRPWAAEMPSAGRALSASLLGKLRAKGVLVERLTHAAGLSATGDP----ELDAQ 181
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE--DGIINPWSGFTNIF 296
+ E I A T A+ + ++RG RI++VGTT +R LE A E DG++ P G T +
Sbjct: 182 LPLPERYDIPARTVAAITAARARGARIIAVGTTVVRALEGAALEHGDGVLRPGPGETALV 241
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+T + R VD L++ H P + L+ AF ++ + A+ YR + +GD +LL
Sbjct: 242 VTAATQLRVVDALLTGMHAPSESHYRLLRAFLPEALLERAWDAALGAGYRSHEFGDLALL 301
>gi|213417524|ref|ZP_03350666.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
Length = 83
Score = 87.0 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 37/72 (51%), Positives = 52/72 (72%)
Query: 285 IINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHA 344
+I P+ G T IFI PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+
Sbjct: 1 MIEPFFGDTQIFIYPGYQYKVIDALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQK 60
Query: 345 YRFYSYGDTSLL 356
YRF+SYGD +
Sbjct: 61 YRFFSYGDAMFI 72
>gi|89100781|ref|ZP_01173634.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
sp. NRRL B-14911]
gi|89084484|gb|EAR63632.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
sp. NRRL B-14911]
Length = 74
Score = 85.9 bits (211), Expect = 1e-14, Method: Composition-based stats.
Identities = 37/73 (50%), Positives = 51/73 (69%)
Query: 284 GIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISH 343
G + SG+T+IFI PGY F+A+D +++NFHLPKSTL+ML+SA G E Y A+
Sbjct: 1 GRLEAGSGWTSIFIYPGYEFKAIDGMITNFHLPKSTLIMLISALAGRENVLNAYNEAVKE 60
Query: 344 AYRFYSYGDTSLL 356
YRF+S+GD L+
Sbjct: 61 RYRFFSFGDAMLI 73
>gi|213025218|ref|ZP_03339665.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Typhi str. 404ty]
Length = 304
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 77/131 (58%), Gaps = 4/131 (3%)
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFM---PVKVEDTD 236
Y++ ++K GS+ P+AG+HFT +L+ ++ G + F+TLHV + + ++ + +
Sbjct: 172 YRSVFSKKYGSLEIPSAGIHFTWDLIQKIKDKGGLISFITLHVASTEMLSNRKIQTKCVE 231
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWSGFTNI 295
+ ++ E + TA +N+ K GGRI +VGTT R LE+A + E + SG+T +
Sbjct: 232 EVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLESAYSREHNCLKASSGWTAL 291
Query: 296 FITPGYRFRAV 306
+I PGY+ + V
Sbjct: 292 YIHPGYQLKVV 302
>gi|167564026|ref|ZP_02356942.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia oklahomensis EO147]
Length = 188
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 92/198 (46%), Gaps = 17/198 (8%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDFDLPP IA + R ++RL+ V N S P + D ++LPA + D +VFN
Sbjct: 4 LSDFDFDLPPELIAQTALPERSASRLLEVD-NTSEPPRLVDRRFAELPACVAPGDLLVFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKV+ A RF I + + R SK G L
Sbjct: 63 DTKVLKA-----RFFGHKASGGRIEVLIERVTGARTALAQIRASKRPAPGTTLTL----- 112
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ATV ++ L F +EL I G +PLPPYI + DA D YQT
Sbjct: 113 ADAFDATVGERVEPF-FTLHFPEDCLEL---IERYGRLPLPPYI--EHTPDATDETRYQT 166
Query: 183 TYAKIQGSVAAPTAGLHF 200
+A G+VAAPTAGLHF
Sbjct: 167 VFAANPGAVAAPTAGLHF 184
>gi|167740108|ref|ZP_02412882.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 14]
Length = 191
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 95/206 (46%), Gaps = 17/206 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
+ + +FDFDLPP IA + R ++RL+ V + N S P + D ++LPA + D +
Sbjct: 2 LTLSDFDFDLPPELIAQTALPERSASRLLEVDNTNPSAPPRLVDRRFAELPACVAPGDLL 61
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFN+TKV+ A RF +I + + R SK G L
Sbjct: 62 VFNDTKVLKA-----RFFGRKASGGKIEVLIERVTGERTALAQIRASKSPPPGTTLTL-- 114
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ TV ++ L + +ER G +PLPPYI + DA D
Sbjct: 115 ---ADAFDVTVGERVEPFFTLHFPDDCLVLIERH----GRLPLPPYI--EHAPDAADETR 165
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLL 205
YQT +A G+VAAPTAGLHF +L
Sbjct: 166 YQTVFAANPGAVAAPTAGLHFDDAVL 191
>gi|315931776|gb|EFV10731.1| queuosine biosynthesis family protein [Campylobacter jejuni subsp.
jejuni 327]
Length = 210
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 105/215 (48%), Gaps = 24/215 (11%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAI 59
+++ +D+ L IA P P++ ARL+V N +L LP N AI
Sbjct: 5 LLLSSYDYTLANELIANYPTNPKEDARLLVFDRKNKEIFHTTFKNLQDFLP-----NCAI 59
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMR-VSPNSWSVYARPSKVIKKGDILHFF 118
FN+TKVI A++ G + +I LH ++ ++ A+ +KK +IL+F
Sbjct: 60 FFNDTKVIKARIYGNKVSG-----GKIELFLHQPFLNSHNPLFLAQIKGRVKKDEILYF- 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVF-----SISGIELERQISLVGTIPLPPYIARKRPID 173
+ L+ V++ N G + F ++ L + +G IPLPPYI KR +
Sbjct: 114 ----KKDLKIRVVELLNDGLRKVQFFQNDKTLDTSNLYNLLDKIGHIPLPPYI--KREDE 167
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRL 208
D DYQ+ +AK G+VAAPTA LHF+ +L L
Sbjct: 168 KSDLKDYQSIFAKNLGAVAAPTASLHFSETMLENL 202
>gi|254387071|ref|ZP_05002347.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces sp. Mg1]
gi|194345892|gb|EDX26858.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces sp. Mg1]
Length = 157
Score = 79.3 bits (194), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 58/94 (61%)
Query: 265 IVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLV 324
+++VGTT++R LE+AT DG++ G+T++ +TPG RAVD L++ H P ++ LM++
Sbjct: 59 VIAVGTTAVRALESATGPDGVVRTAGGWTDLVVTPGRGVRAVDGLLTGLHEPGASHLMML 118
Query: 325 SAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
A G E ++ Y A + ++ GD LL +
Sbjct: 119 EAVAGAEAVRRGYAAARAGLCLWHECGDVHLLLK 152
>gi|162453253|ref|YP_001615620.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Sorangium
cellulosum 'So ce 56']
gi|161163835|emb|CAN95140.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Sorangium
cellulosum 'So ce 56']
Length = 341
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 144/357 (40%), Gaps = 42/357 (11%)
Query: 21 FPRDS---ARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFC 77
+PR++ RL+ V P + D ++DLPA L D +V N+ + A L+G
Sbjct: 6 WPRENPLEERLLHVDPRAG---RLRDARIADLPALLEPGDLLVVNDGATMPASLHGA--- 59
Query: 78 HINRREKEISCTLHMRVSPNSWSVYA------------RPSK-VIKKGDILHFFSQDGQS 124
R + L +S +S RP+ + GD + F +D
Sbjct: 60 --TERGAAVEVRLIGELSEGRYSALLFGAGDWHTRTEDRPAPPALGPGDAV-TFGED--- 113
Query: 125 RLEATV--IDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
L ATV + + + + F G L + G Y+A I QT
Sbjct: 114 -LSATVERVSPASPRLVEIAFHERGAPLWSALYRRGRPIQYAYVAGPLEI-----WHAQT 167
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVG-AGTFMPVKVEDTDDHIMH 241
YA P+AG LL LI G++V +T G + T P D +
Sbjct: 168 RYASRPLCAELPSAGRPLVWGLLLELIRRGVRVASLTHAAGISSTGEPA----LDALLPL 223
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE-TATTEDGIINPWSGFTNIFITPG 300
E I T A+ K+RG R+++VGTT R LE A G + +G T++ + PG
Sbjct: 224 PERFDIPEETVAAVREAKARGRRVIAVGTTVTRALEGCAAQHGGELRAGAGVTDLMLHPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+R R VD L++ H P + L+ AF + +A Y + +GD+ L+
Sbjct: 284 FRPRVVDGLLTGVHDPTESHFRLLEAFAPASLLHRANSYAEEAGYLCHEFGDSYLVL 340
>gi|108761264|ref|YP_634449.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Myxococcus xanthus DK 1622]
gi|108465144|gb|ABF90329.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Myxococcus xanthus DK 1622]
Length = 364
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 149/366 (40%), Gaps = 70/366 (19%)
Query: 24 DSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRRE 83
+ RL+ V P D V+DLP+ L + D +V N+ + A L + R E
Sbjct: 35 EEGRLLHVEPRARR---YRDTRVADLPSLLRAGDLLVVNDAATLPASL-------VGRTE 84
Query: 84 --KEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILL 141
+ I L R +W+ + GD + + + R V+ G L+
Sbjct: 85 SGERIELRLLSREPDGTWT-----GVLFGAGD----WRRRTEDRPPPPVL---AVGAGLV 132
Query: 142 VFSISGIELERQISLVGTIPLPPYIAR-----------------KRPIDARDYVD----- 179
V + + +V +P P + R RP+ Y++
Sbjct: 133 VGGLKAL-------VVAVLPPSPRLLRVAFDATGAALWSGLYRSGRPVQ-YAYLEAPLSL 184
Query: 180 --YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
QT Y SV AP+AGL T ++L L G+++ +T G + T D
Sbjct: 185 WHVQTAYGARPWSVEAPSAGLPLTWSVLLTLRKQGVRLASLTHAAG--------LSSTGD 236
Query: 238 HIMHSEIGF-----IDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSG 291
+ + + + I A T +A+ ++ GGR+V+VGTT +R LE A G +
Sbjct: 237 AALDAALPWPERSDIPAATVEAVLHTRASGGRVVAVGTTVVRALEGRAARHGGWLVAGEE 296
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T++ + PG+ R V L + H P S L+ AF + +++ HA + Y + +G
Sbjct: 297 VTDLLLGPGFVPRLVHGLFTGVHEPGSRHHALLQAFAPLPLLQEVAAHAEARGYLGHEFG 356
Query: 352 DTSLLF 357
D+ LL
Sbjct: 357 DSCLLL 362
>gi|218671499|ref|ZP_03521169.1| queuine tRNA-ribosyltransferase [Rhizobium etli GR56]
Length = 444
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Query: 294 NIFITPG--YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
IFITP R D F LP+STL MLVSAF G E Y+HAIS YRFYSYG
Sbjct: 1 RIFITPATVQGGRHAD---DQFPLPRSTLFMLVSAFSGFETMHAAYEHAISTGYRFYSYG 57
Query: 352 DTSLLFQKR 360
D SLLF++R
Sbjct: 58 DASLLFRER 66
>gi|325129853|gb|EGC52659.1| Queuosine biosynthesis family protein [Neisseria meningitidis
OX99.30304]
Length = 133
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/64 (59%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Query: 158 GTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYF 217
G +PLPPYI +R DA D YQT YAK QG+VAAPTAGLHFT LL RL
Sbjct: 72 GHLPLPPYI--ERAADADDDSRYQTVYAKYQGAVAAPTAGLHFTEELLRRLKDKRAVTAE 129
Query: 218 VTLH 221
VTLH
Sbjct: 130 VTLH 133
>gi|262197945|ref|YP_003269154.1| Queuosine biosynthesis protein [Haliangium ochraceum DSM 14365]
gi|262081292|gb|ACY17261.1| Queuosine biosynthesis protein [Haliangium ochraceum DSM 14365]
Length = 363
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 88/181 (48%), Gaps = 10/181 (5%)
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVG-AGTFMPVKVEDTDDHI 239
QT YA +V P+ G + LL RL + GI+ F+T G + T P D +
Sbjct: 192 QTPYAWRPWAVEMPSTGRPLSWALLDRLAAAGIEHAFLTHAAGLSATGDPA----LDAAL 247
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
E I A TA+A ++RGGRIV+VGTT +R LE+A G +G I+
Sbjct: 248 PLPERYAIPAQTARACRVARARGGRIVAVGTTVVRALESARGVAG-----AGVATERISR 302
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
+R RAVD +++ H P + L+ AF ++++ A++ Y + GD ++
Sbjct: 303 RHRLRAVDGILTGIHAPGESHFELLEAFAAPAALRRVHAEAVAGDYLAHELGDLMMIMPA 362
Query: 360 R 360
R
Sbjct: 363 R 363
>gi|3341650|emb|CAA13168.1| z63f [Vibrio cholerae]
Length = 202
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 92/195 (47%), Gaps = 25/195 (12%)
Query: 19 PVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCH 78
P R ++RL+ + N S LV D D+ + D +VFNNT+VI A++ G +
Sbjct: 28 PKAERTASRLLQLDGN-SGQLV--DGTFKDVFELVEPGDLLVFNNTRVIPARMFGRKASG 84
Query: 79 INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG-----QSRLEATVIDK 133
++ + + ++ + R SK K G L+ D Q+R +A +
Sbjct: 85 -----GKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGENDEFHAVMQARHDALFEIR 139
Query: 134 WNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAA 193
+ ++L ++ +G +PLPPYI RP + D YQT Y + G+VAA
Sbjct: 140 FTAETVVLDI----------LNQIGHMPLPPYI--DRPDEETDKERYQTVYNQKPGAVAA 187
Query: 194 PTAGLHFTSNLLSRL 208
PTAGLHF LL ++
Sbjct: 188 PTAGLHFDQALLEQI 202
>gi|325518193|gb|EGC97962.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia sp. TJI49]
Length = 86
Score = 68.2 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/70 (42%), Positives = 50/70 (71%)
Query: 204 LLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGG 263
LL++L ++G++ +TLHVGAGTF PV+VE+ +H MHSE + + + ++RGG
Sbjct: 4 LLAKLDAMGVERATLTLHVGAGTFQPVRVENIAEHKMHSEWYELPQSLVDKIAATRARGG 63
Query: 264 RIVSVGTTSL 273
++++VGTTS+
Sbjct: 64 KVIAVGTTSM 73
>gi|310814917|ref|YP_003962881.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Ketogulonicigenium vulgare Y25]
gi|308753652|gb|ADO41581.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Ketogulonicigenium vulgare Y25]
Length = 106
Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/105 (38%), Positives = 56/105 (53%), Gaps = 7/105 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IALRP PR +A+L+V + ISD V++L A N D +V
Sbjct: 1 MKLSDFDFTLPEDLIALRPAVPRTAAKLLVARGD-----TISDLTVAELAAQFNPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARP 105
N+TKVI A+L+G+R H I TL + +W + P
Sbjct: 56 LNDTKVIPARLSGLR--HRGEATARIEVTLLQPTADGAWMALSPP 98
>gi|225166247|ref|ZP_03727949.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Opitutaceae bacterium TAV2]
gi|224799506|gb|EEG18033.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Opitutaceae bacterium TAV2]
Length = 86
Score = 67.0 bits (162), Expect = 5e-09, Method: Composition-based stats.
Identities = 33/69 (47%), Positives = 44/69 (63%), Gaps = 6/69 (8%)
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFC------GIEETKKMYQHAISHAYRFY 348
I+I P FR VD L++NFH P+STL+ LVSAF GI +++Y AI+ YRF+
Sbjct: 18 IYIYPPRTFRGVDALVTNFHQPRSTLMCLVSAFLTPGSTDGIAWLRELYAEAIAREYRFF 77
Query: 349 SYGDTSLLF 357
SYGD L+
Sbjct: 78 SYGDAMLIL 86
>gi|293418472|ref|ZP_06660907.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli B088]
gi|291325000|gb|EFE64415.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli B088]
Length = 65
Score = 65.9 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/51 (54%), Positives = 37/51 (72%)
Query: 306 VDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 2 VDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFI 52
>gi|114778173|ref|ZP_01453060.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Mariprofundus ferrooxydans PV-1]
gi|114551591|gb|EAU54145.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Mariprofundus ferrooxydans PV-1]
Length = 65
Score = 65.1 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/47 (63%), Positives = 33/47 (70%)
Query: 306 VDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
VD L++NFHLPKSTL+MLVSA G E Y HA YRFYSYGD
Sbjct: 2 VDALLTNFHLPKSTLIMLVSALAGRERVLAAYTHAREEGYRFYSYGD 48
>gi|227874426|ref|ZP_03992606.1| possible S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Oribacterium sinus F0268]
gi|227839721|gb|EEJ50171.1| possible S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Oribacterium sinus F0268]
Length = 132
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 66/143 (46%), Gaps = 11/143 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M K+F +DLP IA P+ R S+RLM+++ I D+ +L+ D +V
Sbjct: 1 MNTKDFYYDLPEELIAQDPLLNRSSSRLMLLNKETG---EIEHKHFYDILDYLHPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKVI A+L GV+ ++ L R W +P K +K G + F
Sbjct: 58 LNETKVIPARLYGVK----EDTGAQVEVLLLHRKDKEHWECLVKPGKKLKPGARISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVF 143
G RL+A ++D G L+ F
Sbjct: 111 -GDGRLKAEIVDILEEGNRLIRF 132
>gi|218658868|ref|ZP_03514798.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhizobium
etli IE4771]
Length = 90
Score = 63.9 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/79 (39%), Positives = 49/79 (62%), Gaps = 5/79 (6%)
Query: 84 KEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQS----RLEATVIDKWNTGEI 139
+++S TLHMR+ P+ W +A+P K IK+GD + F G+S L+ATV +K GE+
Sbjct: 13 QQVSATLHMRLGPSRWKAFAKPGKRIKEGDRIA-FGHSGESCFLGSLDATVEEKGEAGEV 71
Query: 140 LLVFSISGIELERQISLVG 158
L F ++G L+ I+ +G
Sbjct: 72 TLAFDLTGPALDEAIAAIG 90
>gi|255027598|ref|ZP_05299584.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL J2-003]
Length = 97
Score = 62.8 bits (151), Expect = 8e-08, Method: Composition-based stats.
Identities = 31/75 (41%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++LN DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKESG---DIKDQHFTDIISYLNEGDALV 57
Query: 61 FNNTKVITAQLNGVR 75
N+T+V+ A+L+G++
Sbjct: 58 LNDTRVLPARLHGIK 72
>gi|205374302|ref|ZP_03227101.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
coahuilensis m4-4]
Length = 57
Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 36/54 (66%)
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ +D +++NFHLPKSTL+MLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 3 LKGIDAMITNFHLPKSTLIMLVSALAGKEHVLHAYETAVKEKYRFFSFGDAMFI 56
>gi|218509644|ref|ZP_03507522.1| putative S-adenosylmethionine tRNA ribosyltransferase protein
[Rhizobium etli Brasil 5]
Length = 348
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 141/362 (38%), Gaps = 55/362 (15%)
Query: 23 RDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRR 82
R SARL+VV P+ + + D ++L + D IV N+ + A L+G
Sbjct: 9 RQSARLLVVEPDGT----MRDLPRANLGTLFDPGDLIVANDAATLPASLHGT-------- 56
Query: 83 EKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVID-KWNTGEILL 141
+ C + V W + P + + + F S D ++R E + ++G+ L
Sbjct: 57 --HLQCGKTIEVRLAGWLSPSAPVRFLA----IVFGSGDHRTRTEDRLQPPALSSGDRLQ 110
Query: 142 VFSISGIELER--------QISLVGTIP--LPPYIARKRPI------DARDYVDYQTTYA 185
+ + +ER +++ GT RPI + D T A
Sbjct: 111 LGPLEA-RVERILDHPRFVELNFEGTRAAMFAGLAQHGRPIQYAHVPEPLALWDVWTRIA 169
Query: 186 KIQGSVAAPTAGLHFTSNLLS--RLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSE 243
+ AP+A +++ R IG F TL AG + T D + S
Sbjct: 170 ARPVAFEAPSASFALDWHIVQAWRRREIG----FATLTHAAG------ISSTGDPALDSR 219
Query: 244 IGFIDAP------TAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
+ F D P T + + RG RI+++GT+ +R LE A DG + G I
Sbjct: 220 LPF-DEPYHIPECTVAQVARAQLRGSRIIAIGTSVVRALEAAANPDGSVRAGDGIATGRI 278
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
G R VD +++ H P + L+ AF + YR + +GD+ LL
Sbjct: 279 ACGTPLRVVDAVLTGVHQPGESHFELLRAFADDSLLASASTALTACGYRAHEFGDSMLLN 338
Query: 358 QK 359
++
Sbjct: 339 RQ 340
>gi|225552488|ref|ZP_03773428.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
sp. SV1]
gi|225371486|gb|EEH00916.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
sp. SV1]
Length = 102
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 158 GTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYF 217
G +PLPPYI KR D D YQT Y+K GS A+ TAGLHF+ +L S L+ I I
Sbjct: 29 GFVPLPPYI--KRDYDKIDENRYQTIYSKYVGSAASATAGLHFSRDLFSALLKITILNMI 86
Query: 218 VTLHV-GAGTFMPVKV 232
++L + GA F K+
Sbjct: 87 LSLFMWGAWDFSSYKI 102
>gi|218510812|ref|ZP_03508690.1| putative S-adenosylmethionine tRNA ribosyltransferase protein
[Rhizobium etli Brasil 5]
Length = 251
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 66/152 (43%), Gaps = 13/152 (8%)
Query: 214 KVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAP------TAQALNSVKSRGGRIVS 267
++ F TL AG + T D + S + F D P T + + RG RI++
Sbjct: 99 EIGFATLTHAAG------ISSTGDPALDSRLPF-DEPYHIPECTVAQVARAQLRGSRIIA 151
Query: 268 VGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAF 327
+GT+ +R LE A DG + G I G R VD +++ H P + L+ AF
Sbjct: 152 IGTSVVRALEAAANPDGSVRAGDGIATGRIACGTPLRVVDAVLTGVHQPGESHFELLRAF 211
Query: 328 CGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
++ YR + +GD+ LL ++
Sbjct: 212 ADDGFLASASTALTAYGYRAHEFGDSMLLNRQ 243
>gi|289677977|ref|ZP_06498867.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. syringae FF5]
Length = 170
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 87/200 (43%), Gaps = 41/200 (20%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R S+RL+ L P ++ +DL L D +
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLL----TLDGPTGALAHRQFTDLLEHLRPGDLM 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDIL-HFF 118
VFNNT+VI A+L G +K L + V +V+ +L H
Sbjct: 57 VFNNTRVIPARLFG---------QKASGGKLEILV-----------ERVLDSHRVLAHVR 96
Query: 119 SQDGQSRLEATVIDKWNTGEIL----LVFSISGIE-----LERQISLVGTIPLPPYIARK 169
S + +ID E++ +F + E LER VG +PLPPYI
Sbjct: 97 SSKSPKPGSSILIDGGGEAEMVARHDALFELRFAEEVLPLLER----VGHMPLPPYI--D 150
Query: 170 RPIDARDYVDYQTTYAKIQG 189
RP + D YQT YA+ G
Sbjct: 151 RPDEGADRERYQTVYAQRAG 170
>gi|258615070|ref|ZP_05712840.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium DO]
Length = 133
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 67/146 (45%), Gaps = 17/146 (11%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++FDFDLP IA P+ RD +RL+V+ + D ++ L DA+V
Sbjct: 2 LTTEDFDFDLPEELIAQTPLKDRDHSRLLVLDRKTGE---MEDKHFHEIIEELQPGDALV 58
Query: 61 FNNTKVITAQLNGVR---FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
NNT+V+ A+L G + H + L ++W +P+K K G + F
Sbjct: 59 MNNTRVLPARLYGEKPDTGAH-------LEVLLLTNTQGDTWETLIKPAKRAKVGTRISF 111
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVF 143
G RL+A V ++ G ++ F
Sbjct: 112 ----GDGRLQAVVKEELEHGGRIIDF 133
>gi|153853723|ref|ZP_01995079.1| hypothetical protein DORLON_01070 [Dorea longicatena DSM 13814]
gi|149753473|gb|EDM63404.1| hypothetical protein DORLON_01070 [Dorea longicatena DSM 13814]
Length = 138
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 62/137 (45%), Gaps = 11/137 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F ++LP IA P+ R S+RL+V+ S H+ ++ +L+ D +V
Sbjct: 1 MKRQDFYYELPEELIAQDPLEDRSSSRLLVLDKETGA---FSHHVFKEITEYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + N + I L R N W +P K K G + F
Sbjct: 58 INDTKVIPARLIGSK-VETNAK---IEVLLLKRKENNVWETLVKPGKKAKVGAKISF--- 110
Query: 121 DGQSRLEATVIDKWNTG 137
G L VID G
Sbjct: 111 -GDGLLMGEVIDVVEEG 126
>gi|219685389|ref|ZP_03540208.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
garinii Far04]
gi|219673162|gb|EED30182.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
garinii Far04]
Length = 53
Score = 56.6 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 308 ILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+L +NFH P+STLLMLVS+F G + Y+ AI+ Y+F+SYGD L+
Sbjct: 1 MLFTNFHTPQSTLLMLVSSFAGKDFVFSSYEEAINKGYKFFSYGDAMLVL 50
>gi|218459304|ref|ZP_03499395.1| putative S-adenosylmethionine tRNA ribosyltransferase protein
[Rhizobium etli Kim 5]
Length = 251
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 65/152 (42%), Gaps = 13/152 (8%)
Query: 214 KVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAP------TAQALNSVKSRGGRIVS 267
++ F TL AG + T D + S + F D P T + + RG RI++
Sbjct: 99 EIGFATLTHAAG------ISSTGDPALDSRLPF-DEPYHIPECTVAQVARAQLRGSRIIA 151
Query: 268 VGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAF 327
+GT+ +R LE A DG + G I G R VD +++ H P + L+ AF
Sbjct: 152 IGTSVVRALEAAANPDGSVRAGDGIATGRIACGTPLRVVDAVLTGVHQPGGSHFELLRAF 211
Query: 328 CGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
+ YR + +GD+ LL ++
Sbjct: 212 ADNGLLDSASTALTACGYRAHEFGDSMLLNRQ 243
>gi|86361286|ref|YP_473173.1| putative S-adenosylmethionine tRNA ribosyltransferase protein
[Rhizobium etli CFN 42]
gi|86285388|gb|ABC94446.1| putative S-adenosylmethionine tRNA ribosyltransferase protein
[Rhizobium etli CFN 42]
Length = 348
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 63/149 (42%), Gaps = 13/149 (8%)
Query: 214 KVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAP------TAQALNSVKSRGGRIVS 267
++ F TL AG + T D + S + F D P T + + RG RI++
Sbjct: 196 EIGFATLTHAAG------ISSTGDPALDSRLPF-DEPYHIPECTVAQVARAQLRGSRIIA 248
Query: 268 VGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAF 327
+GT+ +R LE A DG + G I G R VD +++ H P + L+ AF
Sbjct: 249 IGTSVVRALEAAANPDGSVRAGDGIATGRIACGTPLRVVDAVLTGVHQPGESHFELLRAF 308
Query: 328 CGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ YR + +GD+ LL
Sbjct: 309 ADDGFLASASTALTACGYRAHEFGDSMLL 337
>gi|225552299|ref|ZP_03773239.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
sp. SV1]
gi|225371297|gb|EEH00727.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
sp. SV1]
Length = 53
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 35/49 (71%)
Query: 308 ILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+L +NFH P+STLLMLVS+F G + Y+ AI+ Y+F+SYGD L+
Sbjct: 1 MLFTNFHTPQSTLLMLVSSFAGKDFVFSSYEEAINKGYKFFSYGDAMLI 49
>gi|257439750|ref|ZP_05615505.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Faecalibacterium prausnitzii A2-165]
gi|257197770|gb|EEU96054.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Faecalibacterium prausnitzii A2-165]
Length = 121
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 4 KEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNN 63
K+F +DLP IA P PRDSARLMV+ I + DLP +L D +V NN
Sbjct: 14 KDFWYDLPKELIAQEPADPRDSARLMVLSQKDD---SIQHRIFRDLPEYLEPGDLLVVNN 70
Query: 64 TKVITAQLNGVR 75
+KV+ A+ G +
Sbjct: 71 SKVLPARHRGCQ 82
>gi|218660412|ref|ZP_03516342.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhizobium
etli IE4771]
Length = 38
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/34 (70%), Positives = 26/34 (76%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPN 34
M V FDFDLP RIALRP PRDSARL+VV P+
Sbjct: 1 MRVDLFDFDLPDERIALRPAEPRDSARLLVVDPH 34
>gi|213026254|ref|ZP_03340701.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Typhi str. 404ty]
Length = 66
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY+ + VD L++N H PK+T ++L F G++ K Y + +F +GD L+ Q
Sbjct: 2 PGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLMKAYASEDIQSCQFDMFGDCMLIIQ 61
>gi|30231107|gb|AAP23122.1|AF461557_3 QueA [Pseudomonas syringae pv. glycinea]
Length = 136
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 42/74 (56%), Gaps = 5/74 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAI 59
M V +F F+LP S IA RP+ R S+RL+ L P ++ +DL L D +
Sbjct: 1 MRVADFTFELPDSLIARRPLVERRSSRLL----TLDGPTGALAHRQFTDLLEHLRPGDLM 56
Query: 60 VFNNTKVITAQLNG 73
VFNNT+VI A+L G
Sbjct: 57 VFNNTRVIPARLFG 70
>gi|325518191|gb|EGC97961.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia sp. TJI49]
Length = 122
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LPP IA + R ++RL+ V + P + D +DLPA + D +VFN
Sbjct: 21 LSDFDFNLPPELIAQTALPDRTASRLLEVD-GAAEPARLVDRRFADLPACIAPGDLLVFN 79
Query: 63 NTKVITAQLNG 73
+TKV+ A+ G
Sbjct: 80 DTKVLKARFFG 90
>gi|330903857|gb|EGH34429.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. japonica str. M301072PT]
Length = 103
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 27/50 (54%), Positives = 31/50 (62%), Gaps = 6/50 (12%)
Query: 150 LERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLH 199
LER VG +PLPPYI RP + D YQT YA+ G+VAAPTA H
Sbjct: 60 LER----VGHMPLPPYI--DRPDEGADRERYQTVYAQRAGAVAAPTARPH 103
>gi|257487221|ref|ZP_05641262.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 142
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R S+RL+ L P ++ +DL L D +
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLL----TLDGPTGALAHRQFTDLLEHLRPGDLM 56
Query: 60 VFNNTKVITAQLNG 73
VFNNT+VI A+L G
Sbjct: 57 VFNNTRVIPARLFG 70
>gi|30231093|gb|AAP23111.1|AF461554_3 QueA [Pseudomonas syringae pv. angulata]
gi|30231119|gb|AAP23131.1|AF461560_3 QueA [Pseudomonas syringae pv. tabaci]
Length = 136
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R S+RL+ L P ++ +DL L D +
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLL----TLDGPTGALAHRQFTDLLEHLRPGDLM 56
Query: 60 VFNNTKVITAQLNG 73
VFNNT+VI A+L G
Sbjct: 57 VFNNTRVIPARLFG 70
>gi|239993599|ref|ZP_04714123.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Alteromonas
macleodii ATCC 27126]
Length = 127
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 8/115 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP IA P R ++RL+ + ++ + +D+ F+ D +V
Sbjct: 1 MKLSDFSFELPEKLIAKYPTQQRTASRLLHLDGKTGN---VAHTMFADMLKFVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
FNNT+VI A+L G + ++ + S N+ + R SK K G L
Sbjct: 58 FNNTRVIPARLLGKK-----ETGGQVEVLIERITSDNTALAHVRASKAPKPGTTL 107
>gi|330902171|gb|EGH33416.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pseudomonas syringae pv. japonica str. M301072PT]
Length = 90
Score = 45.1 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R S+RL+ L P ++ +DL L D +
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLL----TLDGPTGALAHRQFTDLLEHLRPGDLM 56
Query: 60 VFNNTKVITAQLNG 73
VFNNT+V+ A+L G
Sbjct: 57 VFNNTRVLPARLFG 70
>gi|222870497|gb|EEF07628.1| predicted protein [Populus trichocarpa]
Length = 308
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+FDF+LP + IA P R ++RL+ + + P +D + +LP L D +VFN+T
Sbjct: 101 DFDFELPENLIAQHPAAQRSASRLLDGRDDATPP---TDRIFHELPDLLQPGDLLVFNDT 157
Query: 65 KVITAQLNG 73
+V+ A++ G
Sbjct: 158 RVLKARIFG 166
>gi|32419294|gb|AAN85165.1| QueA [Pseudomonas syringae pv. syringae]
Length = 70
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAI 59
M V +F F+LP S IA P+ R S+RL+ L P ++ +DL L D +
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLT----LDGPTGALAHRQFTDLLEHLRPGDLM 56
Query: 60 VFNNTKVITAQLNG 73
VFNNT+VI A+L G
Sbjct: 57 VFNNTRVIPARLFG 70
>gi|1620918|emb|CAA70098.1| S-adenosylmethionine: tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi]
Length = 108
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 5/71 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF F+LP S I P R S+RL+V+ P L + ++ V+++ ++NSN +
Sbjct: 1 MKTKEFHFNLPHSLIEQYPSEKRGSSRLIVLDPQLQK--IYHENSVNNILKYINSN---I 55
Query: 61 FNNTKVITAQL 71
FNN+KV +++
Sbjct: 56 FNNSKVRKSRI 66
>gi|213618788|ref|ZP_03372614.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Typhi str.
E98-2068]
gi|289812266|ref|ZP_06542895.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Typhi str.
AG3]
Length = 76
Score = 43.1 bits (100), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P R RL+ +L P H +DL LN D +
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLL----SLEGPTGALTHGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNG 73
VFNNT+VI A+L G
Sbjct: 57 VFNNTRVIPARLFG 70
>gi|254672412|emb|CBA05737.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis alpha275]
Length = 43
Score = 42.7 bits (99), Expect = 0.094, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 322 MLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
MLVSAF G+ + Y++A+ YRF+SYGD +L
Sbjct: 1 MLVSAFSGMGHIRAAYRYAVEREYRFFSYGDAMVL 35
>gi|270593971|ref|ZP_06221487.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Haemophilus influenzae HK1212]
gi|270318375|gb|EFA29518.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Haemophilus influenzae HK1212]
Length = 113
Score = 42.7 bits (99), Expect = 0.096, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R S RL+ ++ I SD+ ++ D ++
Sbjct: 1 MRVSDFNFDLPDELIARYPKTDRVSCRLLQLNGENG---EIFHRTFSDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNG 73
FNNT+VI A++ G
Sbjct: 58 FNNTRVIPARMFG 70
>gi|213583663|ref|ZP_03365489.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Typhi str.
E98-0664]
Length = 150
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P R RL+ +L P H +DL LN D +
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLL----SLEGPTGALTHGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQLNG 73
VFNNT+VI A+L G
Sbjct: 57 VFNNTRVIPARLFG 70
>gi|239826166|ref|YP_002948790.1| coproporphyrinogen III oxidase [Geobacillus sp. WCH70]
gi|239806459|gb|ACS23524.1| Coproporphyrinogen dehydrogenase [Geobacillus sp. WCH70]
Length = 501
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 58/132 (43%), Gaps = 7/132 (5%)
Query: 188 QGSVAAPTAGLHFTSNLLSRLI-SIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGF 246
QGSV A AGLH+ + R + GI + T++ G GT + E+ D +++E+ +
Sbjct: 204 QGSVDAFLAGLHYEMREVGRFLKERGINI--TTIYYGGGTPTSITAEEMDR--LYAEM-Y 258
Query: 247 IDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAV 306
P + + + GR ++ L +L+ + INP S G R V
Sbjct: 259 QSFPNVERVREITVEAGRPDTITPEKLNVLKKWNIDRISINPQSYIQETLKAIG-RHHTV 317
Query: 307 DILMSNFHLPKS 318
D + FHL +
Sbjct: 318 DETIEKFHLARE 329
>gi|167469944|ref|ZP_02334648.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis FV-1]
Length = 98
Score = 41.6 bits (96), Expect = 0.21, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP + IA P R RL+ +L P H + +DL L D +
Sbjct: 1 MRVADFSFELPEALIAHYPQPQRSGCRLL----SLDGPTGTLTHGIFTDLLDKLAPGDLL 56
Query: 60 VFNNTKVITAQLNG 73
VFNNT+VI A+L G
Sbjct: 57 VFNNTRVIPARLFG 70
>gi|289806685|ref|ZP_06537314.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Typhi str. AG3]
Length = 62
Score = 41.2 bits (95), Expect = 0.27, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 31/57 (54%)
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+ + VD L++N H PK+T ++L F G++ K Y + +F +GD L+ Q
Sbjct: 1 QLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLMKAYASEDIQSCQFDMFGDCMLIIQ 57
>gi|207093734|ref|ZP_03241521.1| hypothetical protein HpylHP_13450 [Helicobacter pylori
HPKX_438_AG0C1]
Length = 32
Score = 40.8 bits (94), Expect = 0.29, Method: Composition-based stats.
Identities = 17/32 (53%), Positives = 23/32 (71%)
Query: 326 AFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
A G+E+TK++Y+ AI YRFYSYGD L+
Sbjct: 1 AMIGLEKTKEIYKIAIEKKYRFYSYGDGMLIL 32
>gi|196250672|ref|ZP_03149360.1| Coproporphyrinogen dehydrogenase [Geobacillus sp. G11MC16]
gi|196209751|gb|EDY04522.1| Coproporphyrinogen dehydrogenase [Geobacillus sp. G11MC16]
Length = 519
Score = 40.0 bits (92), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 55/132 (41%), Gaps = 7/132 (5%)
Query: 188 QGSVAAPTAGLHFTSNLLSRLI-SIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGF 246
QGSV A AGLH+ + R + GI++ T++ G GT + E+ D H F
Sbjct: 222 QGSVDAFLAGLHYEMEAVGRFLRERGIRI--TTIYYGGGTPTSITAEEMDQLYAHMYKVF 279
Query: 247 IDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAV 306
P + + GR ++ L +L+ + INP S G R V
Sbjct: 280 ---PDVDRVREITVEAGRPDTITPEKLDVLKKWQIDRISINPQSYIQETLKAIG-RHHTV 335
Query: 307 DILMSNFHLPKS 318
+ ++ FHL +
Sbjct: 336 EETINKFHLARK 347
>gi|138894227|ref|YP_001124680.1| coproporphyrinogen III oxidase [Geobacillus thermodenitrificans
NG80-2]
gi|134265740|gb|ABO65935.1| Coproporphyrinogen oxidase, anaerobic [Geobacillus
thermodenitrificans NG80-2]
Length = 501
Score = 40.0 bits (92), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 55/132 (41%), Gaps = 7/132 (5%)
Query: 188 QGSVAAPTAGLHFTSNLLSRLI-SIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGF 246
QGSV A AGLH+ + R + GI++ T++ G GT + E+ D H F
Sbjct: 204 QGSVDAFLAGLHYEMEAVGRFLRERGIRI--TTIYYGGGTPTSITAEEMDQLYAHMYKVF 261
Query: 247 IDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAV 306
P + + GR ++ L +L+ + INP S G R V
Sbjct: 262 ---PDVDRVREITVEAGRPDTITPEKLDVLKKWQIDRISINPQSYIQETLKAIG-RHHTV 317
Query: 307 DILMSNFHLPKS 318
+ ++ FHL +
Sbjct: 318 EETINKFHLARK 329
>gi|225549199|ref|ZP_03770172.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi 94a]
gi|225370057|gb|EEG99497.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi 94a]
Length = 111
Score = 39.7 bits (91), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF F+L S I P R S+RL+V+ P L + + V+++ ++NSN +
Sbjct: 1 MKTKEFHFNLSHSLIEQYPSEKRGSSRLIVLDPQLQK--IYHKNSVNNILKYINSN---I 55
Query: 61 FNNTKVITAQL 71
FNN+K +++
Sbjct: 56 FNNSKARKSRI 66
>gi|223889170|ref|ZP_03623759.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein QueA) [Borrelia burgdorferi 64b]
gi|223885419|gb|EEF56520.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein QueA) [Borrelia burgdorferi 64b]
Length = 111
Score = 39.7 bits (91), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF F+LP S I R S+RL+V+ P L + + V+++ ++NSN +
Sbjct: 1 MKTKEFHFNLPHSLIEQYSSEKRGSSRLIVLDPQLQK--IYHKNSVNNILKYINSN---I 55
Query: 61 FNNTKVITAQL 71
FNN+K +++
Sbjct: 56 FNNSKARKSRI 66
>gi|213028912|ref|ZP_03343359.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Typhi str.
404ty]
Length = 67
Score = 39.7 bits (91), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M V +F F+LP S IA P R RL+ +L P H +DL LN D +
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLL----SLEGPTGALTHGTFTDLLDKLNPGDLL 56
Query: 60 VFNNTKVITAQ 70
VFNNT+VI A+
Sbjct: 57 VFNNTRVIPAR 67
>gi|221217457|ref|ZP_03588928.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein QueA) [Borrelia burgdorferi 72a]
gi|224533899|ref|ZP_03674484.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi CA-11.2a]
gi|225549698|ref|ZP_03770663.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi 118a]
gi|221192735|gb|EEE18951.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein QueA) [Borrelia burgdorferi 72a]
gi|224512902|gb|EEF83268.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi CA-11.2a]
gi|225369658|gb|EEG99106.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi 118a]
Length = 95
Score = 39.3 bits (90), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF F+L S I P R S+RL+V+ P L + + V+++ ++NSN +
Sbjct: 1 MKTKEFHFNLSHSLIEQYPSEKRGSSRLIVLDPQLQK--IYHKNSVNNILKYINSN---I 55
Query: 61 FNNTKVITAQL 71
FNN+K +++
Sbjct: 56 FNNSKARKSRI 66
>gi|255030599|ref|ZP_05302550.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes LO28]
Length = 43
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 315 LPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+STL+MLVSA + Y HA+ YRF+S+GD +
Sbjct: 1 FTESTLIMLVSALSDRTKILAAYNHAVEEQYRFFSFGDAMFI 42
>gi|291532259|emb|CBL05372.1| hypothetical protein MHY_01750 [Megamonas hypermegale ART12/1]
Length = 36
Score = 38.5 bits (88), Expect = 1.7, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 322 MLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ML+SAF G E Y+ A+ YRF+S+GD +
Sbjct: 1 MLISAFAGREYVLSAYEEAVKEKYRFFSFGDAMFI 35
>gi|295401086|ref|ZP_06811060.1| Coproporphyrinogen dehydrogenase [Geobacillus thermoglucosidasius
C56-YS93]
gi|294976879|gb|EFG52483.1| Coproporphyrinogen dehydrogenase [Geobacillus thermoglucosidasius
C56-YS93]
Length = 501
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 54/134 (40%), Gaps = 11/134 (8%)
Query: 188 QGSVAAPTAGLHFTSNLLSRLI-SIGIKVYFVTLHVGAGTFMPVKVEDTDD--HIMHSEI 244
QGSV A AGLH+ + R + GI + T++ G GT + E+ D +M+
Sbjct: 204 QGSVDAFLAGLHYEMREIGRFLKERGINI--TTIYYGGGTPTSISAEEMDQLYAVMYEAF 261
Query: 245 GFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFR 304
P + + + GR ++ L +L+ INP S G R
Sbjct: 262 -----PNIERVREITVEAGRPDTITPEKLNVLKKWNIGRISINPQSYIQETLKAIG-RHH 315
Query: 305 AVDILMSNFHLPKS 318
VD + FHL +
Sbjct: 316 TVDETIEKFHLARE 329
>gi|255030238|ref|ZP_05302189.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes LO28]
Length = 46
Score = 38.1 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV 31
M V++FDFDLP IA P+ R S+RLMV+
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVL 31
>gi|312112138|ref|YP_003990454.1| coproporphyrinogen dehydrogenase [Geobacillus sp. Y4.1MC1]
gi|311217239|gb|ADP75843.1| Coproporphyrinogen dehydrogenase [Geobacillus sp. Y4.1MC1]
Length = 501
Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 54/134 (40%), Gaps = 11/134 (8%)
Query: 188 QGSVAAPTAGLHFTSNLLSRLI-SIGIKVYFVTLHVGAGTFMPVKVEDTDD--HIMHSEI 244
QGSV A AGLH+ + R + GI + T++ G GT + E+ D +M+
Sbjct: 204 QGSVDAFLAGLHYEMREIGRFLKERGINI--TTIYYGGGTPTSISAEEMDQLYAVMYEAF 261
Query: 245 GFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFR 304
P + + + GR ++ L +L+ INP S G R
Sbjct: 262 -----PNIERVREITVEAGRPDTITPEKLNVLKKWNIGRISINPQSYIQETLKAIG-RHH 315
Query: 305 AVDILMSNFHLPKS 318
VD + FHL +
Sbjct: 316 TVDETIEKFHLARE 329
>gi|56419177|ref|YP_146495.1| coproporphyrinogen III oxidase [Geobacillus kaustophilus HTA426]
gi|56379019|dbj|BAD74927.1| Fe-S oxidoreductase [Geobacillus kaustophilus HTA426]
Length = 499
Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 7/132 (5%)
Query: 188 QGSVAAPTAGLHFTSNLLSRLI-SIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGF 246
QGSV A AGLH+ + R + GI++ T++ G GT + ++ D H F
Sbjct: 202 QGSVDAFLAGLHYEMEAVGRFLRERGIRI--TTIYYGGGTPTSITADEMDRLYAHMYDVF 259
Query: 247 IDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAV 306
P + + GR ++ L +L+ + INP S G R V
Sbjct: 260 ---PDVDRVREITVEAGRPDTITPEKLEVLKKWRIDRISINPQSYIQETLKAIG-RHHTV 315
Query: 307 DILMSNFHLPKS 318
+ + FHL +
Sbjct: 316 EETIHKFHLARQ 327
>gi|261418885|ref|YP_003252567.1| coproporphyrinogen III oxidase [Geobacillus sp. Y412MC61]
gi|319765702|ref|YP_004131203.1| coproporphyrinogen dehydrogenase [Geobacillus sp. Y412MC52]
gi|261375342|gb|ACX78085.1| Coproporphyrinogen dehydrogenase [Geobacillus sp. Y412MC61]
gi|317110568|gb|ADU93060.1| Coproporphyrinogen dehydrogenase [Geobacillus sp. Y412MC52]
Length = 499
Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 7/132 (5%)
Query: 188 QGSVAAPTAGLHFTSNLLSRLI-SIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGF 246
QGSV A AGLH+ + R + GI++ T++ G GT + ++ D H F
Sbjct: 202 QGSVDAFLAGLHYEMEAVGRFLRERGIRI--TTIYYGGGTPTSITADEMDRLYAHMYDVF 259
Query: 247 IDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAV 306
P + + GR ++ L +L+ + INP S G R V
Sbjct: 260 ---PDVDRVREITVEAGRPDTITPEKLEVLKKWRIDRISINPQSYIQETLKAIG-RHHTV 315
Query: 307 DILMSNFHLPKS 318
+ + FHL +
Sbjct: 316 EETIHKFHLARQ 327
>gi|297531162|ref|YP_003672437.1| coproporphyrinogen dehydrogenase [Geobacillus sp. C56-T3]
gi|297254414|gb|ADI27860.1| Coproporphyrinogen dehydrogenase [Geobacillus sp. C56-T3]
Length = 519
Score = 37.7 bits (86), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 7/132 (5%)
Query: 188 QGSVAAPTAGLHFTSNLLSRLI-SIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGF 246
QGSV A AGLH+ + R + GI++ T++ G GT + ++ D H F
Sbjct: 222 QGSVDAFLAGLHYEMEAVGRFLRERGIRI--TTIYYGGGTPTSITADEMDRLYAHMYDVF 279
Query: 247 IDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAV 306
P + + GR ++ L +L+ + INP S G R V
Sbjct: 280 ---PDVDRVREITVEAGRPDTITPEKLEVLKKWRIDRISINPQSYIQETLKAIG-RHHTV 335
Query: 307 DILMSNFHLPKS 318
+ + FHL +
Sbjct: 336 EETIHKFHLARQ 347
Searching..................................................done
Results from round 2
>gi|254780180|ref|YP_003064593.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Liberibacter asiaticus str. psy62]
gi|254039857|gb|ACT56653.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Liberibacter asiaticus str. psy62]
Length = 360
Score = 516 bits (1330), Expect = e-144, Method: Composition-based stats.
Identities = 360/360 (100%), Positives = 360/360 (100%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV
Sbjct: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ
Sbjct: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY
Sbjct: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM
Sbjct: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG
Sbjct: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR
Sbjct: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
>gi|291525119|emb|CBK90706.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Eubacterium rectale DSM 17629]
Length = 352
Score = 504 bits (1298), Expect = e-140, Method: Composition-based stats.
Identities = 155/358 (43%), Positives = 206/358 (57%), Gaps = 16/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FD+DLP IA P+ R S+RLMV+ +S H+ ++ +L D +V
Sbjct: 1 MDVKDFDYDLPEELIAQDPLEDRSSSRLMVLDKKTG---EVSHHVFKEIVKYLRPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L GV+ +I L R + W +P K K G + F
Sbjct: 58 LNNTKVIPARLFGVK----EGTMAKIEILLLKRRQNDVWETLVKPGKKAKPGTKIIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L VID + G L+ FS GI E + +G +PLPPYI + +D Y
Sbjct: 111 -GDGLLTGEVIDVVDDGNRLIQFSYEGI-FEEILDKLGQMPLPPYITHQ----LKDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ G+ + VTLHVG GTF PVKV++ DH M
Sbjct: 165 QTVYAKYDGSAAAPTAGLHFTKELLQQVKDKGVDIAEVTLHVGLGTFRPVKVDNVLDHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +N+ K GGRI+SVGTTS R LE A+ E+G++ SG+T+IFI PG
Sbjct: 225 HSEFYMVSQEAADKINNAKKNGGRIISVGTTSTRTLEAASDENGMLKECSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y F+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YSFKVIDCLITNFHLPQSTLVMLVSALAGREHVLNAYKEAVEERYRFFSFGDAMFITN 342
>gi|238924342|ref|YP_002937858.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Eubacterium
rectale ATCC 33656]
gi|238876017|gb|ACR75724.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Eubacterium
rectale ATCC 33656]
gi|291529393|emb|CBK94979.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Eubacterium rectale M104/1]
Length = 352
Score = 504 bits (1297), Expect = e-140, Method: Composition-based stats.
Identities = 155/358 (43%), Positives = 206/358 (57%), Gaps = 16/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FD+DLP IA P+ R S+RLMV+ +S H+ ++ +L D +V
Sbjct: 1 MDVKDFDYDLPEELIAQDPLEDRSSSRLMVLDKKTG---EVSHHVFKEIVKYLRPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L GV+ +I L R + W +P K K G + F
Sbjct: 58 LNNTKVIPARLFGVK----EGTMAKIEILLLKRRQNDVWETLVKPGKKAKPGTKIIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L VID + G L+ FS GI E + +G +PLPPYI + +D Y
Sbjct: 111 -GDGLLTGEVIDVVDDGNRLIQFSYEGI-FEEILDKLGQMPLPPYITHQ----LKDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ G+ + VTLHVG GTF PVKV++ DH M
Sbjct: 165 QTVYAKYDGSAAAPTAGLHFTKELLQQVKDKGVDIAEVTLHVGLGTFRPVKVDNVLDHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +N+ K GGRI+SVGTTS R LE A+ E+G++ SG+T+IFI PG
Sbjct: 225 HSEFYMVSQEAADKINNAKKNGGRIISVGTTSTRTLEAASDENGMLKECSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y F+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YSFKVIDCLITNFHLPQSTLVMLVSALAGREHVLNAYKEAVEERYRFFSFGDAMFITN 342
>gi|164687536|ref|ZP_02211564.1| hypothetical protein CLOBAR_01177 [Clostridium bartlettii DSM
16795]
gi|164603310|gb|EDQ96775.1| hypothetical protein CLOBAR_01177 [Clostridium bartlettii DSM
16795]
Length = 341
Score = 501 bits (1291), Expect = e-140, Method: Composition-based stats.
Identities = 144/356 (40%), Positives = 201/356 (56%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F+FDLP IA P+ R S++LMV+ I + D+ +LN D +V
Sbjct: 1 MKTSDFNFDLPEELIAQVPIKDRTSSKLMVLDKETG---EIEHRIFRDIIDYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G + +I L R ++W +P K K G F
Sbjct: 58 LNDTRVIPARLIGSKV----ETGGKIEFLLLKRTEDDTWETLVKPGKRAKIGARFSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L A V+ G ++ F +GI E + +G +PLPPYI K Y
Sbjct: 111 -GDGKLIAEVVGMGEDGARIVKFEYNGI-FEEILDELGNMPLPPYITEKLDE----RERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT LL+++ G+ + FVTLHVG GTF PVKV+D D+H M
Sbjct: 165 QTVYSKHNGSAAAPTAGLHFTEELLAKIKEKGVDLAFVTLHVGLGTFRPVKVDDVDNHQM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +N K+ G R++SVGTTS R +E+ E+GI+ SG+TNIFI PG
Sbjct: 225 HSEFYMVTQEAADKINKAKANGNRVISVGTTSTRTIESVADENGIVKATSGWTNIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+++ +D L++NFHLP+STL+MLVS+ G E Y A+ YRF+S+GD +
Sbjct: 285 YKWKVIDNLITNFHLPESTLIMLVSSLAGKEHVLNAYNEAVKERYRFFSFGDAMFI 340
>gi|254518553|ref|ZP_05130609.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
sp. 7_2_43FAA]
gi|226912302|gb|EEH97503.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
sp. 7_2_43FAA]
Length = 342
Score = 501 bits (1290), Expect = e-140, Method: Composition-based stats.
Identities = 153/356 (42%), Positives = 211/356 (59%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDFDLP IA P+ RDS+RLMV+ N I D+ +LN D +V
Sbjct: 1 MKVSDFDFDLPEELIAQHPLEKRDSSRLMVLDKNTG---EIEHKSFHDVIEYLNEGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + +I L R+ + W A+P K K G F
Sbjct: 58 LNNTRVMPARLIGEK----EGTGGKIEFLLLKRIEGDRWECLAKPGKRAKVGQKFTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L TV+D G ++ FS GI E+ + +G +PLPPYI K D Y
Sbjct: 111 -GEGKLICTVVDIVEEGNRIIEFSYEGI-FEQVLDELGEMPLPPYITEK----LEDKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL + + G+ + ++TLHVG GTF PVKVED ++HIM
Sbjct: 165 QTVYSKEKGSAAAPTAGLHFTEELLKEIKAKGVNIAYLTLHVGLGTFRPVKVEDINEHIM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D A +N K RG ++++VGTTS R LET ++G + SG+T+IFI PG
Sbjct: 225 HSEYYHLDNENADLINETKKRGNKVIAVGTTSTRTLETIGDDNGFVREQSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+++ +D L++NFHLP+STL+MLVSA G E Y A+ YRF+S+GD+ L+
Sbjct: 285 YKYKVIDELITNFHLPESTLIMLVSALAGKEHVMNAYNEAVKEKYRFFSFGDSMLI 340
>gi|154483721|ref|ZP_02026169.1| hypothetical protein EUBVEN_01425 [Eubacterium ventriosum ATCC
27560]
gi|149735631|gb|EDM51517.1| hypothetical protein EUBVEN_01425 [Eubacterium ventriosum ATCC
27560]
Length = 380
Score = 500 bits (1288), Expect = e-139, Method: Composition-based stats.
Identities = 156/356 (43%), Positives = 209/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + ++ +DLP IA P+ R S+RLMV+ + I H+ D+ +LN ND +V
Sbjct: 39 MSLHDYYYDLPEELIAQDPLEDRSSSRLMVLDKDTG---EIEHHIFKDIIDYLNPNDCLV 95
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + + +I L R + W +P K K G ++ F
Sbjct: 96 INDTKVIPARLYGSKV----GTDAKIEVLLLKRKENDVWETLVKPGKKCKPGTVISF--- 148
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L VID G L+ F+ GI E + +G +PLPPYI K D Y
Sbjct: 149 -GDGILTGEVIDVVEEGNRLIKFTYEGI-FEEVLDKLGEMPLPPYITHK----LEDKNRY 202
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ GIK+ VTLHVG GTF PVKVE+ +H M
Sbjct: 203 QTVYAKYEGSAAAPTAGLHFTKELLEKIKEKGIKIAHVTLHVGLGTFRPVKVENILEHHM 262
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D A +N ++ GGR+++VGTTS R LET T E+GI++ SG+T IFI PG
Sbjct: 263 HSEFYMVDEEDANMINECRANGGRVIAVGTTSTRTLETVTDENGIVHSGSGWTQIFIYPG 322
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+A+D L++NFHLP+STLLMLVSA G E Y A+ YRF+S+GD +
Sbjct: 323 YQFKAIDCLITNFHLPESTLLMLVSALAGRENVLNAYNKAVEEKYRFFSFGDAMFI 378
>gi|323695094|ref|ZP_08109236.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
symbiosum WAL-14673]
gi|323500849|gb|EGB16769.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
symbiosum WAL-14673]
Length = 347
Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats.
Identities = 155/359 (43%), Positives = 217/359 (60%), Gaps = 16/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+F +DLP IA P+ R S+RL+V++ + I + D+ ++L D +V
Sbjct: 1 MDVKDFYYDLPEELIAQDPLEDRSSSRLLVLNKDTG---EIQHKVFRDILSYLRKGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + + +I L R + W +P K K G +++F
Sbjct: 58 INDTKVIPARLIGSK----EGTDAKIEVLLLKRRENDIWETLVKPGKKAKIGTVINF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L+ TV+D G L+ FS GI E + +G +PLPPYI + +D Y
Sbjct: 111 -GEGLLKGTVVDVVEEGNRLIQFSYKGI-FEEILDELGQMPLPPYITHQ----LQDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT+ LL ++ GI++ VTLHVG GTF PVKV++ +H M
Sbjct: 165 QTVYAKHEGSAAAPTAGLHFTNELLGKIAEKGIEIAHVTLHVGLGTFRPVKVDNVLEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +N K +GGR++ VGTTS R LE+A EDGI+ SG+T+IFI PG
Sbjct: 225 HSEFYIVEEEEARKINDTKKKGGRVICVGTTSCRTLESAAGEDGILKAGSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRF+ +D L++NFHLP+STL+MLVSA G E K Y+ AI YRF+S+GD + K
Sbjct: 285 YRFKILDCLITNFHLPESTLVMLVSALAGREHVLKAYEEAIKERYRFFSFGDAMFIASK 343
>gi|323485700|ref|ZP_08091037.1| hypothetical protein HMPREF9474_02788 [Clostridium symbiosum
WAL-14163]
gi|323400963|gb|EGA93324.1| hypothetical protein HMPREF9474_02788 [Clostridium symbiosum
WAL-14163]
Length = 347
Score = 498 bits (1284), Expect = e-139, Method: Composition-based stats.
Identities = 155/359 (43%), Positives = 217/359 (60%), Gaps = 16/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+F +DLP IA P+ R S+RL+V++ + I + D+ ++L D +V
Sbjct: 1 MDVKDFYYDLPEELIAQDPLEDRSSSRLLVLNKDTG---EIQHKVFRDILSYLRKGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + + +I L R + W +P K K G +++F
Sbjct: 58 INDTKVIPARLIGSK----EGTDAKIEVLLLKRRENDIWETLVKPGKKAKIGTVINF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L+ TV+D G L+ FS GI E + +G +PLPPYI + +D Y
Sbjct: 111 -GEGLLKGTVVDVVEEGNRLIQFSYKGI-FEEILDELGQMPLPPYITHQ----LQDKKRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT+ LL ++ GI++ VTLHVG GTF PVKV++ +H M
Sbjct: 165 QTVYAKHEGSAAAPTAGLHFTNELLGKIAEKGIEIAHVTLHVGLGTFRPVKVDNVLEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +N K +GGR++ VGTTS R LE+A EDGI+ SG+T+IFI PG
Sbjct: 225 HSEFYIVEEEEARKINDTKKKGGRVICVGTTSCRTLESAAGEDGILKAGSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRF+ +D L++NFHLP+STL+MLVSA G E K Y+ AI YRF+S+GD + K
Sbjct: 285 YRFKILDCLITNFHLPESTLVMLVSALAGREHVLKAYEEAIKERYRFFSFGDAMFIASK 343
>gi|253681405|ref|ZP_04862202.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum D str. 1873]
gi|253561117|gb|EES90569.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum D str. 1873]
Length = 341
Score = 498 bits (1284), Expect = e-139, Method: Composition-based stats.
Identities = 153/356 (42%), Positives = 202/356 (56%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RD +RLMVV I + D+ + N D +V
Sbjct: 1 MKVKDFDFYLPEELIAQHPMEKRDESRLMVVDRKSG---HIEHKIFKDILGYFNEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + +I L R+ + W +P K K G F
Sbjct: 58 LNNTRVLPARLIGEK----ENTGGKIEFLLLKRIEGDKWETLVKPGKKAKIGARFVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A V G ++ F GI E + +G +PLPPYI K D Y
Sbjct: 111 -GSGELKAEVKGMGEDGSRIIEFEYEGI-FEEVLDKLGQMPLPPYITEKLD----DKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL + + G+K+ FVTLHVG GTF PVKVED ++H M
Sbjct: 165 QTVYSKEKGSAAAPTAGLHFTKELLKEIENKGVKIAFVTLHVGLGTFRPVKVEDIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA +N K GG++++VGTTS R LET E+G + SG+T+IF+ PG
Sbjct: 225 HSEYYTMSKETADIINKTKENGGKVIAVGTTSCRTLETIGDENGKVKETSGWTDIFMYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STLLMLVSAF E Y+ A+ YRF+S+GD L
Sbjct: 285 YKFKIVDRLITNFHLPQSTLLMLVSAFSSRENIMNAYKEAVDEKYRFFSFGDAMFL 340
>gi|291522418|emb|CBK80711.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Coprococcus catus GD/7]
Length = 341
Score = 498 bits (1284), Expect = e-139, Method: Composition-based stats.
Identities = 159/356 (44%), Positives = 204/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R S+RLMV+ IS H+ D+ +LN D +V
Sbjct: 1 MKTSDFYYDLPEELIAQDPLEDRSSSRLMVLDRESG---EISHHIFKDIIDYLNPEDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L GV+ I L R + W RP K K G L F
Sbjct: 58 INDTKVIPARLYGVK----EDTGAHIEILLLKRRENDVWETLVRPGKKAKPGTRLTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A VID G L+ F GI E + +G +PLPPYI K +D Y
Sbjct: 111 -GDGRLKAEVIDVVEEGNRLIHFEYEGI-FEEILDQLGEMPLPPYITHK----LQDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL+ + + GI++ VTLHVG GTF PVKVED H M
Sbjct: 165 QTVYAKHEGSAAAPTAGLHFTPELLAAIEAKGIRIARVTLHVGLGTFRPVKVEDVTQHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +N K RGGR+++VGTTS R LE+ EDG ++ G+T IFI PG
Sbjct: 225 HSEYYQVTQEAADIINDTKKRGGRVIAVGTTSTRTLESVADEDGTMHAAGGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STLLMLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YKFKCIDALITNFHLPESTLLMLVSALAGKEHIMHAYETAVQERYRFFSFGDAMFI 340
>gi|295090985|emb|CBK77092.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Clostridium cf. saccharolyticum K10]
Length = 341
Score = 498 bits (1283), Expect = e-139, Method: Composition-based stats.
Identities = 152/356 (42%), Positives = 210/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+F FDLP IA P+ R S+RL+V+ + + D+ +LN D +V
Sbjct: 1 MDVKDFYFDLPQELIAQDPLEDRASSRLLVLDRSTG---EVEHRKFRDILEYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + + +I L R + W +P K K G ++ F
Sbjct: 58 INDTKVIPARLIGSK----EGTDAKIEVLLLKRKENDIWETLVKPGKKAKPGTVIRF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+ TV+D G L+ FS GI E + +G +PLPPYI + +D Y
Sbjct: 111 -GDGILKGTVVDVVEEGNRLIQFSYEGI-FEEILDQLGQMPLPPYITHQ----LKDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL + G+K+ VTLHVG GTF PVKVE+ DH M
Sbjct: 165 QTVYAKHEGSAAAPTAGLHFTKELLQEIEDRGVKIAHVTLHVGLGTFRPVKVENVLDHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +NS K GGR++ VGTTS R +E+A+ E+G++ SG+T+IFI PG
Sbjct: 225 HSEFYVVEESEAEKINSTKREGGRVICVGTTSCRTIESASDENGVLKAGSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YQFKILDCLITNFHLPESTLVMLVSALAGREHVLAAYEEAVKERYRFFSFGDAMFI 340
>gi|153816035|ref|ZP_01968703.1| hypothetical protein RUMTOR_02281 [Ruminococcus torques ATCC 27756]
gi|317500973|ref|ZP_07959183.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lachnospiraceae bacterium 8_1_57FAA]
gi|331089128|ref|ZP_08338031.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lachnospiraceae bacterium 3_1_46FAA]
gi|145846682|gb|EDK23600.1| hypothetical protein RUMTOR_02281 [Ruminococcus torques ATCC 27756]
gi|316897676|gb|EFV19737.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lachnospiraceae bacterium 8_1_57FAA]
gi|330405905|gb|EGG85431.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lachnospiraceae bacterium 3_1_46FAA]
Length = 341
Score = 498 bits (1283), Expect = e-139, Method: Composition-based stats.
Identities = 148/357 (41%), Positives = 203/357 (56%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R S+RLM V I H+ S++ +LN D +V
Sbjct: 1 MKTSDFYYDLPEELIAQDPLEDRSSSRLMTVDKETGK---IGHHVFSEIIDYLNEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + +I L R + + W +P + K G + F
Sbjct: 58 INDTKVIPARLIGAK----EETGAKIEVLLLKRGADDVWETLVKPGRKAKPGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L V+D + G L+ F GI E + +G +PLPPYI + +D Y
Sbjct: 111 -GDGLLVGEVVDIVDEGNRLIHFEYEGI-FEEILDQLGQMPLPPYITHQ----LQDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
T YA+ GS AAPTAGLHFT LL ++ G+ + VTLHVG GTF PVKV+D ++H M
Sbjct: 165 NTVYAEHSGSAAAPTAGLHFTPELLRKIEEKGVDIARVTLHVGLGTFRPVKVDDVENHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I+ A+ +N K RGGR++ VGTTS R +E+A E+G + SG+T IFI PG
Sbjct: 225 HSEFYMINEEAAEKINHAKDRGGRVICVGTTSCRTIESAADENGRLKACSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YRF+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD L+
Sbjct: 285 YRFKTLDCLITNFHLPESTLIMLVSALAGKEHVMAAYEEAVKERYRFFSFGDAMLIL 341
>gi|283795917|ref|ZP_06345070.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
sp. M62/1]
gi|291076554|gb|EFE13918.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
sp. M62/1]
Length = 341
Score = 498 bits (1283), Expect = e-139, Method: Composition-based stats.
Identities = 152/356 (42%), Positives = 210/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+F FDLP IA P+ R S+RL+V+ + + D+ +LN D +V
Sbjct: 1 MDVKDFYFDLPQELIAQDPLEDRASSRLLVLDRSTG---EVEHRKFRDILEYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + + +I L R + W +P K K G ++ F
Sbjct: 58 INDTKVIPARLIGSK----EGTDAKIEVLLLKRKENDIWETLVKPGKKAKPGTVIRF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+ TV+D G L+ FS GI E + +G +PLPPYI + +D Y
Sbjct: 111 -GDGILKGTVVDVVEEGNRLIQFSYEGI-FEEILDQLGQMPLPPYITHQ----LKDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL + G+K+ VTLHVG GTF PVKVE+ DH M
Sbjct: 165 QTVYAKHEGSAAAPTAGLHFTKELLQEIEDRGVKIAHVTLHVGLGTFRPVKVENVLDHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +NS K GGR++ VGTTS R +E+A+ E+G++ SG+T+IFI PG
Sbjct: 225 HSEFYVVEKSEAEKINSTKREGGRVICVGTTSCRTIESASDENGVLKAGSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YQFKILDCLITNFHLPESTLVMLVSALAGREHVLAAYEEAVKERYRFFSFGDAMFI 340
>gi|325660922|ref|ZP_08149549.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lachnospiraceae bacterium 4_1_37FAA]
gi|325472429|gb|EGC75640.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lachnospiraceae bacterium 4_1_37FAA]
Length = 341
Score = 498 bits (1282), Expect = e-139, Method: Composition-based stats.
Identities = 147/356 (41%), Positives = 205/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F+FDLP IA P+ R S+RL+V+ H+ ++ +L + D +V
Sbjct: 1 MRKEDFNFDLPEELIAQDPLEDRSSSRLLVLDKETGKT---EHHVFREIIDYLEAGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + + +I L R + W +P K K G + F
Sbjct: 58 INDTKVIPARLIGSKI----GTDAKIEVLLLKRKENDVWETLVKPGKKAKIGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L V+D G L+ F GI E + +G +PLPPYI + D Y
Sbjct: 111 -GDGLLVGEVVDIVEEGNRLIHFEYEGI-FEEILDRLGQMPLPPYITHQ----LEDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ G+++ VTLHVG GTF PVKV++ +H M
Sbjct: 165 QTVYAKHSGSAAAPTAGLHFTPELLKKIEEKGVQIARVTLHVGLGTFRPVKVDNILEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I+ A+ +N+ K+ G R+++VGTTS R +E+A EDG I P SG+T+IFI PG
Sbjct: 225 HSEFYQIEEEAAEKINTAKANGKRVIAVGTTSCRTIESAAKEDGTIAPVSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA G E Y+ AI YRF+S+GD +
Sbjct: 285 YQFKVLDCLITNFHLPESTLVMLVSALAGREHVLNAYEEAIKERYRFFSFGDAMFI 340
>gi|255283315|ref|ZP_05347870.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bryantella
formatexigens DSM 14469]
gi|255266169|gb|EET59374.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bryantella
formatexigens DSM 14469]
Length = 341
Score = 497 bits (1281), Expect = e-139, Method: Composition-based stats.
Identities = 149/356 (41%), Positives = 205/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F FDLP IA P+ R S+RL+V+ + H+ ++ +LN D +V
Sbjct: 1 MKTSDFYFDLPQELIAQDPLEDRSSSRLLVLDRRTG---QMEHHIFKEIVHYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + + +I L R + W +P K K G + F
Sbjct: 58 INDTKVIPARLFGSKV----GTDAKIEILLLKRREGDVWETLVKPGKKAKPGTQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L V++ G L+ F+ GI E + +G +PLPPYI + +D Y
Sbjct: 111 -GDGILMGEVLEVAEDGNRLIRFTYEGI-FEEILDRLGQMPLPPYITHQ----LKDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + G+ + VTLHVG GTF PVKVE+ H M
Sbjct: 165 QTVYAKHDGSAAAPTAGLHFTPELLQEIRDKGVNIAHVTLHVGLGTFRPVKVEEVTQHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +N K+ GG+I+ VGTTS R +E+A E+GI++ SG+T+IFI PG
Sbjct: 225 HSEFYMVEEEQAELINRTKANGGKIICVGTTSCRTIESAADENGILHAGSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF+ +D L++NFHLP+STLLMLVSA G E +K Y A+ YRF+S+GD L+
Sbjct: 285 YRFKILDELITNFHLPESTLLMLVSALAGKENIEKAYAEAVKERYRFFSFGDAMLI 340
>gi|291546236|emb|CBL19344.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Ruminococcus sp. SR1/5]
Length = 341
Score = 497 bits (1281), Expect = e-139, Method: Composition-based stats.
Identities = 150/356 (42%), Positives = 203/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R S+RLM + I +D+ +L+ D +V
Sbjct: 1 MKTSDFYYDLPQELIAQDPLEDRSSSRLMHLSLKDGS---IEHRHFTDILDYLHKGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + I L R + W +P K + G + F
Sbjct: 58 INDTKVIPARLYGHK----EETGALIEILLLKRRENDIWECLVKPGKKARPGAKITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+ +ID + G L+ F GI E + +G +PLPPYI K +D Y
Sbjct: 111 -GDGILKGEIIDIVDEGNRLIQFHYEGI-FEEILDQLGEMPLPPYITHK----LKDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ G+ + VTLHVG GTF PVKV+D + H M
Sbjct: 165 QTVYAKNEGSAAAPTAGLHFTPELLEKVKEKGVNIAHVTLHVGLGTFRPVKVDDVEKHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +N K GGR++SVGTTS R LE+A EDGI+ SG+T IFI PG
Sbjct: 225 HSEFYIVEEDQAKLINDTKKNGGRVISVGTTSCRTLESAAGEDGIVKAGSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+A+D L++NFHLP+STLLMLVSA G E Y+ A+ YRF+S+GD ++
Sbjct: 285 YKFKAIDGLITNFHLPESTLLMLVSALAGKEHIMAAYEEAVKERYRFFSFGDAMMI 340
>gi|255656788|ref|ZP_05402197.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile QCD-23m63]
gi|296452383|ref|ZP_06894084.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile NAP08]
gi|296877731|ref|ZP_06901758.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile NAP07]
gi|296258713|gb|EFH05607.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile NAP08]
gi|296431264|gb|EFH17084.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile NAP07]
Length = 341
Score = 497 bits (1281), Expect = e-139, Method: Composition-based stats.
Identities = 146/356 (41%), Positives = 197/356 (55%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F FDLP IA P+ R S+RLMV+ I + D+ +LN D +V
Sbjct: 1 MKTSDFKFDLPQELIAQVPIEDRASSRLMVLDKETGN---IEHKVFRDIIEYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G + +I L R ++W +P K K G F
Sbjct: 58 LNNTRVIPARLMGEKL----ETGGKIEFLLLKRTEEDTWQALVKPGKRAKVGTKFSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L V+D + G ++ F GI E + +G +PLPPYI + Y
Sbjct: 111 -GNGKLIGEVVDLSDEGSRIIKFHYDGI-FEEILDELGNMPLPPYITARLDE----KERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT LLS++ G+ + FVTLHVG GTF PVKVED +H M
Sbjct: 165 QTVYSKHNGSAAAPTAGLHFTEELLSKIKEKGVDIAFVTLHVGLGTFRPVKVEDVLNHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +N K G ++ VGTTS R +E+A EDG + SG+T IFI PG
Sbjct: 225 HSEYYMVSQEAADKINRAKENGNNVICVGTTSCRTIESACNEDGKMKETSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA CG + Y A+ YRF+S+GD ++
Sbjct: 285 YKFKVLDKLITNFHLPESTLIMLVSAICGKDNVLNAYNEAVKERYRFFSFGDAMII 340
>gi|331085363|ref|ZP_08334449.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lachnospiraceae bacterium 9_1_43BFAA]
gi|330408146|gb|EGG87636.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lachnospiraceae bacterium 9_1_43BFAA]
Length = 341
Score = 497 bits (1280), Expect = e-138, Method: Composition-based stats.
Identities = 147/356 (41%), Positives = 204/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F+FDLP IA P+ R S+RL+V+ H+ ++ +L D +V
Sbjct: 1 MRKEDFNFDLPEELIAQDPLEDRSSSRLLVLDKETGKT---EHHVFREIIEYLEEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + + +I L R + W +P K K G + F
Sbjct: 58 INDTKVIPARLIGSKI----GTDAKIEVLLLKRKENDVWETLVKPGKKAKIGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L V+D G L+ F GI E + +G +PLPPYI + D Y
Sbjct: 111 -GDGLLVGEVVDIVEEGNRLIHFEYEGI-FEEILDRLGQMPLPPYITHQ----LEDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ G+++ VTLHVG GTF PVKV++ +H M
Sbjct: 165 QTVYAKHSGSAAAPTAGLHFTPELLKKIEEKGVQIARVTLHVGLGTFRPVKVDNILEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I+ A+ +N+ K+ G R+++VGTTS R +E+A EDG I P SG+T+IFI PG
Sbjct: 225 HSEFYQIEEEAAEKINTAKANGKRVIAVGTTSCRTIESAVKEDGTIAPVSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA G E Y+ AI YRF+S+GD +
Sbjct: 285 YQFKVLDCLITNFHLPESTLVMLVSALAGREHVLNAYEEAIKERYRFFSFGDAMFI 340
>gi|296132706|ref|YP_003639953.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Thermincola
sp. JR]
gi|296031284|gb|ADG82052.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Thermincola
potens JR]
Length = 341
Score = 497 bits (1280), Expect = e-138, Method: Composition-based stats.
Identities = 155/357 (43%), Positives = 210/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDF+LP IA PV PRD +RL+VV+ + I + ++ D +V
Sbjct: 1 MKVADFDFELPEELIAQEPVEPRDHSRLLVVNRDNGN---IEHKRFYNCIDYIEPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + +I L R+ + W V +P K +K G ++ F
Sbjct: 58 VNNTRVLPARLFGEK----KGSGAKIEFVLLKRIDRDKWEVLVKPGKRVKPGTVILF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G LEA V+ +G L+ F GI E + G +PLPPYI ++ D Y
Sbjct: 111 -GGGLLEAFVLQTTESGGRLVEFRYEGI-FEELLDRFGQMPLPPYIKKQLD----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ G+ + V LHVG GTF PVKV++ +DH M
Sbjct: 165 QTVYAKASGSAAAPTAGLHFTEELLKKMHEKGVVIAEVMLHVGLGTFRPVKVDNVEDHRM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E I+ TA +N + RG +I++VGTTS R LETA G + P G+T+IFI PG
Sbjct: 225 HAEYYEINEETANLINRQRDRGHKIIAVGTTSCRALETAADSSGNLKPGCGWTDIFIFPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YRF+AVD L++NFHLPKSTL+MLVSAF G + K YQ AI+ YRF+S+GD ++
Sbjct: 285 YRFKAVDRLITNFHLPKSTLVMLVSAFAGKDLIMKAYQEAIAEKYRFFSFGDAMMIL 341
>gi|255101975|ref|ZP_05330952.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile QCD-63q42]
gi|255307843|ref|ZP_05352014.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile ATCC 43255]
Length = 341
Score = 497 bits (1279), Expect = e-138, Method: Composition-based stats.
Identities = 145/356 (40%), Positives = 197/356 (55%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F FDLP IA P+ R S+RLMV+ I + D+ +LN D +V
Sbjct: 1 MKTSDFKFDLPQELIAQVPIEDRASSRLMVLDKETGN---IEHKVFRDIIEYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G + +I L R ++W +P K K G F
Sbjct: 58 LNNTRVIPARLIGEKL----ETGGKIEFLLLKRTEEDTWQALVKPGKRAKVGTKFSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L V+D + G ++ F GI E + +G +PLPPYI + Y
Sbjct: 111 -GNGKLIGEVVDLSDEGSRIIKFHYDGI-FEEILDELGNMPLPPYITARLDE----KERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT LL+++ G+ + FVTLHVG GTF PVKVED +H M
Sbjct: 165 QTVYSKHNGSAAAPTAGLHFTEELLNKIKEKGVDIAFVTLHVGLGTFRPVKVEDVLNHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +N K G ++ VGTTS R +E+A EDG + SG+T IFI PG
Sbjct: 225 HSEYYMVSQEAADKINRAKENGKNVICVGTTSCRTIESACNEDGKMKETSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA CG + Y A+ YRF+S+GD ++
Sbjct: 285 YKFKVLDKLITNFHLPESTLIMLVSAICGKDNVLNAYNEAVKERYRFFSFGDAMII 340
>gi|254976399|ref|ZP_05272871.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile QCD-66c26]
gi|255093785|ref|ZP_05323263.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile CIP 107932]
gi|255315536|ref|ZP_05357119.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile QCD-76w55]
gi|255518199|ref|ZP_05385875.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile QCD-97b34]
gi|255651315|ref|ZP_05398217.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile QCD-37x79]
gi|260684379|ref|YP_003215664.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile CD196]
gi|260688038|ref|YP_003219172.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile R20291]
gi|306521147|ref|ZP_07407494.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile QCD-32g58]
gi|260210542|emb|CBA65071.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile CD196]
gi|260214055|emb|CBE06218.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile R20291]
Length = 341
Score = 497 bits (1279), Expect = e-138, Method: Composition-based stats.
Identities = 145/356 (40%), Positives = 197/356 (55%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F FDLP IA P+ R S+RLMV+ I + D+ +LN D +V
Sbjct: 1 MKTSDFKFDLPQELIAQVPIEDRASSRLMVLDKETGN---IEHKVFRDIIEYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G + +I L R ++W +P K K G F
Sbjct: 58 LNNTRVIPARLIGEKL----ETGGKIEFLLLKRTEEDTWQALVKPGKRAKVGTKFSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L V+D + G ++ F GI E + +G +PLPPYI + Y
Sbjct: 111 -GNGKLIGEVVDLSDEGSRIIKFLYDGI-FEEILDELGNMPLPPYITARLDE----KERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT LL+++ G+ + FVTLHVG GTF PVKVED +H M
Sbjct: 165 QTVYSKHNGSAAAPTAGLHFTEELLNKIKEKGVDIAFVTLHVGLGTFRPVKVEDVLNHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +N K G ++ VGTTS R +E+A EDG + SG+T IFI PG
Sbjct: 225 HSEYYMVSQEAADKINRAKENGNNVICVGTTSCRTIESACNEDGKMKETSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA CG + Y A+ YRF+S+GD ++
Sbjct: 285 YKFKVLDKLITNFHLPESTLIMLVSAICGKDNVLNAYNEAVKERYRFFSFGDAMII 340
>gi|225573604|ref|ZP_03782359.1| hypothetical protein RUMHYD_01798 [Blautia hydrogenotrophica DSM
10507]
gi|225039043|gb|EEG49289.1| hypothetical protein RUMHYD_01798 [Blautia hydrogenotrophica DSM
10507]
Length = 341
Score = 496 bits (1278), Expect = e-138, Method: Composition-based stats.
Identities = 151/356 (42%), Positives = 200/356 (56%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F ++LP IA P+ R S+RL+ + IS D+ +L D +V
Sbjct: 1 MKTSDFYYELPQELIAQDPLEDRSSSRLLHLDRRTG---EISHGTFQDILTYLKPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + I L R + W +P K K G L F
Sbjct: 58 INDTKVIPARLFGRK----EDTGAVIELLLLKRRENDVWETLVKPGKKAKVGTKLIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L ++D G L+ F GI E + +G +PLPPYI K +D Y
Sbjct: 111 -GDGILCGEILDVVEEGNRLIQFQYEGI-FEEILDQLGEMPLPPYITHK----LKDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL R+ +G+K+ VTLHVG GTF PVKVED +H M
Sbjct: 165 QTVYAKHEGSAAAPTAGLHFTPELLQRVKEMGVKIAHVTLHVGLGTFRPVKVEDVAEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A +N K GGR++ VGTTS R LE+AT E+G + SG+T IFI PG
Sbjct: 225 HSEFYVVEQEQAALVNETKRNGGRVICVGTTSCRTLESATDEEGKLQAGSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STLLMLVSAF G E+ Y+ A+ YRF+S+GD +
Sbjct: 285 YQFKIMDGLITNFHLPESTLLMLVSAFAGKEKIMAAYKEAVRERYRFFSFGDAMFI 340
>gi|168208647|ref|ZP_02634272.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens B str. ATCC 3626]
gi|170713009|gb|EDT25191.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens B str. ATCC 3626]
Length = 341
Score = 496 bits (1277), Expect = e-138, Method: Composition-based stats.
Identities = 146/356 (41%), Positives = 207/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P+ RDS+RLMV+ I D+ +LN D +V
Sbjct: 1 MKVSDFYFELPEELIAQYPLEKRDSSRLMVLDKKTG---EIEHRKFHDILEYLNEGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + +I L R+ + W A+P + K G + F
Sbjct: 58 LNNTRVLPARLIGEK----EETGGKIEFLLLKRIEGDKWECLAKPGRKAKVGTVFTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+A V + G ++ F GI E+ + +G +PLPPYI K D Y
Sbjct: 111 -GEGKLKAIVREIGEEGNRIIEFKYDGI-FEQVLDELGQMPLPPYIHEK----LEDKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL + G+ + ++TLHVG GTF PVKV+D ++H+M
Sbjct: 165 QTVYSKEKGSAAAPTAGLHFTEELLKEIKDKGVNIAYLTLHVGLGTFRPVKVDDVNNHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D A+ +N K G R+++VGTTS R LET E+G + SG+T+IFI PG
Sbjct: 225 HSEYYHLDKENAELINKTKEAGNRVIAVGTTSSRTLETIGDENGRVREQSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STL+MLVSA G + Y A+ YRF+S+GD+ +
Sbjct: 285 YKFKIVDNLITNFHLPESTLIMLVSALAGQDNIMNAYNTAVKEKYRFFSFGDSMFI 340
>gi|168187975|ref|ZP_02622610.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum C str. Eklund]
gi|169294189|gb|EDS76322.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum C str. Eklund]
Length = 341
Score = 495 bits (1276), Expect = e-138, Method: Composition-based stats.
Identities = 155/356 (43%), Positives = 204/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RD +RLMVV I + D+ +LN D +V
Sbjct: 1 MKVKDFDFYLPQELIAQHPMEKRDESRLMVVDRKSG---QIEHKIFKDILGYLNKGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + +I L R+ ++W +P K K G F
Sbjct: 58 LNNTRVLPARLIGEK----ENTGGKIEFLLLKRIEGDTWETLVKPGKKAKIGARFVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A V G ++ F GI E + +G +PLPPYI + D Y
Sbjct: 111 -GSGELKAEVRAMGEDGSRIIEFEYEGI-FEEVLDKLGQMPLPPYITER----LEDRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL + GIK+ FVTLHVG GTF PVKVED + H M
Sbjct: 165 QTVYSKEKGSAAAPTAGLHFTEELLKEIKEKGIKIVFVTLHVGLGTFRPVKVEDIEKHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA+ +N+ K GG+I++VGTTS R LET E G + SG+T+IF+ PG
Sbjct: 225 HSEYYTMSKETAEIINNTKENGGKIIAVGTTSCRTLETIGDECGKVRETSGWTDIFMYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STLLMLVSAF E Y+ A+ + YRF+S+GD L
Sbjct: 285 YKFKVVDRLITNFHLPQSTLLMLVSAFSTRENIMNAYKEAVENKYRFFSFGDAMFL 340
>gi|118444595|ref|YP_877907.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
novyi NT]
gi|118135051|gb|ABK62095.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
novyi NT]
Length = 344
Score = 495 bits (1276), Expect = e-138, Method: Composition-based stats.
Identities = 154/355 (43%), Positives = 204/355 (57%), Gaps = 16/355 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
VK+FDF LP IA P+ RD +RLMVV I + D+ +LN D +V
Sbjct: 5 KVKDFDFYLPQELIAQHPMEKRDESRLMVVDRKSG---QIEHKIFRDILGYLNEGDCLVL 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNT+V+ A+L G + +I L R+ ++W +P K K G F
Sbjct: 62 NNTRVLPARLIGEK----ENTGGKIEFLLLRRIEGDTWETLVKPGKKAKIGARFVF---- 113
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G L+A V G ++ F GI E + +G +PLPPYI + D YQ
Sbjct: 114 GSGELKAEVKSMGEDGSRIIEFEYEGI-FEEVLDKLGQMPLPPYITER----LEDKERYQ 168
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T Y+K +GS AAPTAGLHFT LL + GIK+ FVTLHVG GTF PVKVE+ ++H MH
Sbjct: 169 TVYSKEKGSAAAPTAGLHFTEELLKEIKEKGIKIAFVTLHVGLGTFRPVKVENIEEHHMH 228
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
SE + TA +N+ K GG+I++VGTTS R LET EDG + SG+T+IF+ PGY
Sbjct: 229 SEYYTMSKETADIINNTKENGGKIIAVGTTSCRTLETIGDEDGKVRETSGWTDIFMYPGY 288
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+F+ VD L++NFHLP+STLLMLVSAF E Y+ A+ + YRF+S+GD L
Sbjct: 289 KFKVVDRLITNFHLPQSTLLMLVSAFSSRENIMNAYKEAVKNKYRFFSFGDAMFL 343
>gi|210616166|ref|ZP_03290969.1| hypothetical protein CLONEX_03188 [Clostridium nexile DSM 1787]
gi|210149928|gb|EEA80937.1| hypothetical protein CLONEX_03188 [Clostridium nexile DSM 1787]
Length = 353
Score = 495 bits (1275), Expect = e-138, Method: Composition-based stats.
Identities = 142/356 (39%), Positives = 199/356 (55%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F FDLP IA P+ R S+RL+V+ + H+ ++ +L D +V
Sbjct: 13 MRKEDFYFDLPEELIAQDPLEDRSSSRLLVLDKETGK---VEHHVFREIIDYLQEGDCLV 69
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + + +I L R + W +P K K G + F
Sbjct: 70 INDTKVIPARLIGSKI----GTDAKIEVLLLKRKENDVWETLVKPGKKAKVGTRISF--- 122
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L V+D G L+ F GI E + +G +PLPPYI + D Y
Sbjct: 123 -GDGLLVGEVVDIVEEGNRLIHFEYEGI-FEEILDQLGQMPLPPYITHQ----LEDKNRY 176
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + G+++ VTLHVG GTF PVKV++ +H M
Sbjct: 177 QTVYAKHSGSAAAPTAGLHFTPELLKEIEEKGVQIARVTLHVGLGTFRPVKVDNILEHHM 236
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ID A+ +N K G R++ VGTTS R +E+A ++G ++ +G+T IFI PG
Sbjct: 237 HSEFYQIDEEAAEKINRAKESGHRVICVGTTSCRTIESAADKNGKLHATNGWTEIFIYPG 296
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+ +D L++NFHLP+STL+MLVSA G E+ Y+ A+ YRF+S+GD +
Sbjct: 297 YEFKVLDCLITNFHLPESTLVMLVSALAGREQVLSAYEEAVKEKYRFFSFGDAMFI 352
>gi|18310928|ref|NP_562862.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens str. 13]
gi|110799784|ref|YP_696626.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens ATCC 13124]
gi|168204870|ref|ZP_02630875.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens E str. JGS1987]
gi|168214133|ref|ZP_02639758.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens CPE str. F4969]
gi|168215572|ref|ZP_02641197.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens NCTC 8239]
gi|182624446|ref|ZP_02952230.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens D str. JGS1721]
gi|21263867|sp|Q8XJ15|QUEA_CLOPE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|123344605|sp|Q0TP14|QUEA_CLOP1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|18145610|dbj|BAB81652.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens str. 13]
gi|110674431|gb|ABG83418.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens ATCC 13124]
gi|170663657|gb|EDT16340.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens E str. JGS1987]
gi|170714349|gb|EDT26531.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens CPE str. F4969]
gi|177910449|gb|EDT72826.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens D str. JGS1721]
gi|182382391|gb|EDT79870.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens NCTC 8239]
Length = 341
Score = 495 bits (1275), Expect = e-138, Method: Composition-based stats.
Identities = 146/356 (41%), Positives = 207/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P+ RDS+RLMV+ I D+ +LN D +V
Sbjct: 1 MKVSDFYFELPEELIAQYPLEKRDSSRLMVLDKKTG---EIEHRKFHDILEYLNEGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + +I L R+ + W A+P + K G + F
Sbjct: 58 LNNTRVLPARLIGEK----EETGGKIEFLLLKRIEGDKWECLAKPGRKAKVGTVFTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+A V + G ++ F GI E+ + +G +PLPPYI K D Y
Sbjct: 111 -GEGKLKAIVREIGEEGNRIIEFKYDGI-FEQVLDELGQMPLPPYIHEK----LEDKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL + G+ + ++TLHVG GTF PVKV+D ++H+M
Sbjct: 165 QTVYSKEKGSAAAPTAGLHFTEELLKEIKDKGVNIAYLTLHVGLGTFRPVKVDDVNNHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D A+ +N K G R+++VGTTS R LET E+G + SG+T+IFI PG
Sbjct: 225 HSEYYHLDKENAELINKTKEAGKRVIAVGTTSSRTLETIGDENGRVREQSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STL+MLVSA G + Y A+ YRF+S+GD+ +
Sbjct: 285 YKFKIVDNLITNFHLPESTLIMLVSALAGQDNIMNAYNTAVKEKYRFFSFGDSMFI 340
>gi|317470297|ref|ZP_07929690.1| tRNA ribosyltransferase-isomerase [Anaerostipes sp. 3_2_56FAA]
gi|316902205|gb|EFV24126.1| tRNA ribosyltransferase-isomerase [Anaerostipes sp. 3_2_56FAA]
Length = 341
Score = 494 bits (1273), Expect = e-138, Method: Composition-based stats.
Identities = 154/357 (43%), Positives = 203/357 (56%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F FDLP IA P+ R S+RL+V+ I ++ +L D +V
Sbjct: 1 MKTSDFTFDLPEELIAQDPLTDRSSSRLLVLDKETG---EIRHEGFRNIAGYLKRGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + +I L R N+W +P + K G + F
Sbjct: 58 LNDTKVIPARLIGEK----EGTGAKIEVLLLKRKQDNTWETLVKPGRKAKPGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
GQ +L V D + G L+ F GI E + +G +PLPPYI + +D Y
Sbjct: 111 -GQGKLVGEVTDIVDEGNRLVKFEFDGI-FEEVLDELGQMPLPPYITHQ----LKDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL + GI++ +VTLHVG GTF PVKVED +H M
Sbjct: 165 QTVYAKHEGSAAAPTAGLHFTKELLKEIEEKGIRLAYVTLHVGLGTFRPVKVEDVTEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D A+ +N + GGRI+SVGTTS R LE+A E+G I P SG+T IFI PG
Sbjct: 225 HSEFYVVDEEAAEKINKTRKEGGRIISVGTTSTRTLESAADENGFIEPKSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ +D L++NFHLP+STLLMLVSA G E K Y A+ YRF+S+GD +
Sbjct: 285 YKFKVIDGLITNFHLPESTLLMLVSALAGKEHILKAYDEAVKERYRFFSFGDAMFIM 341
>gi|167748863|ref|ZP_02420990.1| hypothetical protein ANACAC_03637 [Anaerostipes caccae DSM 14662]
gi|167651833|gb|EDR95962.1| hypothetical protein ANACAC_03637 [Anaerostipes caccae DSM 14662]
Length = 357
Score = 494 bits (1273), Expect = e-138, Method: Composition-based stats.
Identities = 154/357 (43%), Positives = 203/357 (56%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F FDLP IA P+ R S+RL+V+ I ++ +L D +V
Sbjct: 17 MKTSDFTFDLPEELIAQDPLTDRSSSRLLVLDKETG---EIRHEGFRNIAGYLKRGDCLV 73
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + +I L R N+W +P + K G + F
Sbjct: 74 LNDTKVIPARLIGEK----EGTGAKIEVLLLKRKQDNTWETLVKPGRKAKPGTRISF--- 126
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
GQ +L V D + G L+ F GI E + +G +PLPPYI + +D Y
Sbjct: 127 -GQGKLVGEVTDIVDEGNRLVKFEFDGI-FEEVLDELGQMPLPPYITHQ----LKDKNRY 180
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL + GI++ +VTLHVG GTF PVKVED +H M
Sbjct: 181 QTVYAKHEGSAAAPTAGLHFTKELLKEIEEKGIRLAYVTLHVGLGTFRPVKVEDVTEHHM 240
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D A+ +N + GGRI+SVGTTS R LE+A E+G I P SG+T IFI PG
Sbjct: 241 HSEFYVVDEEAAEKINKTRKEGGRIISVGTTSTRTLESAADENGFIEPKSGWTEIFIYPG 300
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ +D L++NFHLP+STLLMLVSA G E K Y A+ YRF+S+GD +
Sbjct: 301 YKFKVIDGLITNFHLPESTLLMLVSALAGKEHILKAYDEAVKERYRFFSFGDAMFIM 357
>gi|169343759|ref|ZP_02864758.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens C str. JGS1495]
gi|169298319|gb|EDS80409.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens C str. JGS1495]
Length = 341
Score = 494 bits (1273), Expect = e-138, Method: Composition-based stats.
Identities = 146/356 (41%), Positives = 207/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P+ RDS+RLMV+ I D+ +LN D +V
Sbjct: 1 MKVSDFYFELPEELIAQYPLEKRDSSRLMVLDKKTG---EIEHRKFHDILEYLNEGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + +I L R+ + W A+P + K G + F
Sbjct: 58 LNNTRVLPARLIGEK----EETGGKIEFLLLKRIEGDKWECLAKPGRKAKVGTVFTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+A V + G ++ F GI E+ + +G +PLPPYI K D Y
Sbjct: 111 -GEGKLKAIVREIGEEGNRIIEFKYDGI-FEQVLDELGQMPLPPYIHEK----LEDKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL + G+ + ++TLHVG GTF PVKV+D ++H+M
Sbjct: 165 QTVYSKEKGSAAAPTAGLHFTEELLKEIKDKGVNIAYLTLHVGLGTFRPVKVDDVNNHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D A+ +N K G R+++VGTTS R LET E+G + SG+T+IFI PG
Sbjct: 225 HSEYYHLDKENAELINKTKEVGKRVIAVGTTSSRTLETIGDENGRVREQSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STL+MLVSA G + Y A+ YRF+S+GD+ +
Sbjct: 285 YKFKIVDNLITNFHLPESTLIMLVSALAGQDNIMNAYNTAVKEKYRFFSFGDSMFI 340
>gi|110802898|ref|YP_699223.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens SM101]
gi|123047252|sp|Q0SRN4|QUEA_CLOPS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|110683399|gb|ABG86769.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
perfringens SM101]
Length = 341
Score = 494 bits (1273), Expect = e-138, Method: Composition-based stats.
Identities = 146/356 (41%), Positives = 208/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P+ RDS+RLMV+ I D+ +LN D +V
Sbjct: 1 MKVSDFYFELPEELIAQYPLEKRDSSRLMVLDKKTG---EIEHRKFHDILEYLNEGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + +I L R+ + W A+P + K G + F
Sbjct: 58 LNNTRVLPARLIGEK----EETGGKIEFLLLKRIEGDKWECLAKPGRKAKVGTVFTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+A V + G ++ F GI E+ + +G +PLPPYI K D Y
Sbjct: 111 -GEGKLKAIVREIGEEGNRIIEFKYDGI-FEQVLDELGQMPLPPYIHEK----LEDKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT +LL + G+ + ++TLHVG GTF PVKV+D ++H+M
Sbjct: 165 QTVYSKEKGSAAAPTAGLHFTEDLLKEIKDKGVNIAYLTLHVGLGTFRPVKVDDVNNHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D A+ +N K G R+++VGTTS R LET E+G + SG+T+IFI PG
Sbjct: 225 HSEYYHLDKENAELINKTKEAGKRVIAVGTTSSRTLETIGDENGRVREQSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STL+MLVSA G + Y A+ YRF+S+GD+ +
Sbjct: 285 YKFKIVDNLITNFHLPESTLIMLVSALAGQDNIMNAYNTAVKEKYRFFSFGDSMFI 340
>gi|160935784|ref|ZP_02083159.1| hypothetical protein CLOBOL_00674 [Clostridium bolteae ATCC
BAA-613]
gi|158441528|gb|EDP19238.1| hypothetical protein CLOBOL_00674 [Clostridium bolteae ATCC
BAA-613]
Length = 349
Score = 494 bits (1273), Expect = e-138, Method: Composition-based stats.
Identities = 151/356 (42%), Positives = 212/356 (59%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FD++LP IA P+ R ++RLMV+ I + D+ +L D +V
Sbjct: 1 MDVKDFDYELPEELIAQDPLEDRSASRLMVLDRETG---EIQHRIFKDITEYLRPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L GV+ +I L R + W RP K K G ++ F
Sbjct: 58 INDTKVIPARLFGVK----KDTGAKIEILLLKRRENDVWETLVRPGKKAKPGTVIEF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L TV+D + G L+ F GI E + +G +PLPPYI + +D Y
Sbjct: 111 -GEGLLTGTVVDTVDDGNRLIQFHYKGI-FEEILDQLGQMPLPPYITHQ----LKDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +GS AAPTAGLHFT LL+ + +G+K+ VTLHVG GTF PVKVE+ DH M
Sbjct: 165 QTVYARHEGSAAAPTAGLHFTQELLAEIEGMGVKIAHVTLHVGLGTFRPVKVENVQDHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +N ++ GGR++ VGTTS R +E+A+TEDG++ +G+T IFI PG
Sbjct: 225 HSEFYIVEESEAKKVNDTRAAGGRVICVGTTSCRTVESASTEDGVLKAGTGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YRFKVLDALITNFHLPQSTLVMLVSALAGREHILDAYREAVKEGYRFFSFGDAMFI 340
>gi|266622484|ref|ZP_06115419.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
hathewayi DSM 13479]
gi|288865792|gb|EFC98090.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
hathewayi DSM 13479]
Length = 365
Score = 494 bits (1272), Expect = e-138, Method: Composition-based stats.
Identities = 155/357 (43%), Positives = 214/357 (59%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+F+F+LP IA P+ R S+RL+V+ I D+ ++L D +V
Sbjct: 1 MNVKDFNFELPQELIAQDPLEDRSSSRLLVLDKKTG---EIEHRTFRDILSYLRKGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L GV+ E +I L R + W +P K K G ++ F
Sbjct: 58 INDTKVIPARLFGVK----EGTEAKIEILLLKRRENDIWETLVKPGKKAKIGTVITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L TV+D + G L+ FS GI E + +G +PLPPYI + +D Y
Sbjct: 111 -GEGLLTGTVVDIVDEGNRLIQFSYEGI-FEEILDRLGQMPLPPYITHQ----LKDQTRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL+ + ++G+ + VTLHVG GTF PVKV++ +DH M
Sbjct: 165 QTVYAKHEGSAAAPTAGLHFTKELLAEIEAMGVVIAHVTLHVGLGTFRPVKVDEIEDHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D A+ +N K GGRIV VGTTS R +E+A+++DG++ SG+T IFI PG
Sbjct: 225 HSEFYIVDEAEAKKVNDTKKNGGRIVCVGTTSCRTVESASSDDGVLKAGSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YRF+ +D L++NFHLP+STL+MLVSA G E Y+ AI YRF+S+GD +
Sbjct: 285 YRFKTLDCLITNFHLPESTLVMLVSALAGREHVLNAYEEAIRERYRFFSFGDAMFIT 341
>gi|291562523|emb|CBL41339.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[butyrate-producing bacterium SS3/4]
Length = 341
Score = 494 bits (1272), Expect = e-137, Method: Composition-based stats.
Identities = 153/356 (42%), Positives = 208/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+F+LPP IA P+ R ++RL+V+ I D+ +L D +V
Sbjct: 1 MNVTDFNFELPPELIAQDPLEDRAASRLLVLDKKTG---EIEHRHFRDILKYLKKGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + + I L R S N W +P K +K G + F
Sbjct: 58 INDTKVIPARLMGHKI----GTDAGIEVLLLKRKSDNVWETLVKPGKKMKVGAEVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+ VID + G L+ F GI E + +G +PLPPYI + +D Y
Sbjct: 111 -GDGLLKGKVIDVVDEGNRLIQFEYDGI-FEEILDKLGQMPLPPYITHQ----LKDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL + +G+K+ VTLHVG GTF PVKV+ ++H M
Sbjct: 165 QTVYAKNEGSAAAPTAGLHFTKELLQEIEEMGVKIAHVTLHVGLGTFRPVKVDTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +N K+ GGR++ VGTTS R LE+AT +DGI+ SG+T IFI PG
Sbjct: 225 HSEFYMVEESEAKKINDTKANGGRVICVGTTSCRTLESATGDDGILKAGSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA G E YQ AI YRF+S+GD +
Sbjct: 285 YKFKILDCLITNFHLPESTLVMLVSALAGREHILNAYQEAIKERYRFFSFGDAMFI 340
>gi|126700420|ref|YP_001089317.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
difficile 630]
gi|123363078|sp|Q183N9|QUEA_CLOD6 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|115251857|emb|CAJ69692.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein QueA) [Clostridium difficile]
Length = 341
Score = 494 bits (1272), Expect = e-137, Method: Composition-based stats.
Identities = 145/356 (40%), Positives = 198/356 (55%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F FDLP IA P+ R S+RLMV+ I + D+ +LN D +V
Sbjct: 1 MKTRDFKFDLPQELIAQVPIEDRASSRLMVLDKETGN---IEHKVFRDIIEYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G + +I L R ++W +P K K G F
Sbjct: 58 LNNTRVIPARLIGEKL----ETGGKIEFLLLKRTEEDTWQALVKPGKRAKVGTKFSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L V+D + G ++ F GI E + +G +PLPPYI + Y
Sbjct: 111 -GNGKLIGEVVDLSDEGSRIIKFHYDGI-FEEILDELGNMPLPPYITARLDE----KERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT LL+++ G+ + FVTLHVG GTF PVKVED +H M
Sbjct: 165 QTVYSKHNGSAAAPTAGLHFTEELLNKIKEKGVDIAFVTLHVGLGTFRPVKVEDVLNHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +N K G ++ VGTTS R +E+A EDG + SG+T IFI PG
Sbjct: 225 HSEYYMVSQEAADKINRAKENGKNVICVGTTSCRTIESACNEDGKMKETSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA CG + Y A+ YRF+S+GD ++
Sbjct: 285 YKFKVLDKLITNFHLPESTLIMLVSAICGKDNVLNAYNEAVKERYRFFSFGDAMII 340
>gi|167766704|ref|ZP_02438757.1| hypothetical protein CLOSS21_01210 [Clostridium sp. SS2/1]
gi|317497532|ref|ZP_07955851.1| tRNA ribosyltransferase-isomerase [Lachnospiraceae bacterium
5_1_63FAA]
gi|167711641|gb|EDS22220.1| hypothetical protein CLOSS21_01210 [Clostridium sp. SS2/1]
gi|316895215|gb|EFV17378.1| tRNA ribosyltransferase-isomerase [Lachnospiraceae bacterium
5_1_63FAA]
Length = 342
Score = 493 bits (1270), Expect = e-137, Method: Composition-based stats.
Identities = 150/358 (41%), Positives = 203/358 (56%), Gaps = 16/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R S+RL+ + N I + ++ +L D +V
Sbjct: 1 MKVSDFTFDLPEELIAQDPLEDRSSSRLLTLDKNTG---EIGHDVFHNIVNYLKPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L G + ++ L R N W +P K + G + F
Sbjct: 58 LNNTKVIPARLIGAK----EETGGKVEVLLLKRKQDNVWETLVKPGKKARPGARISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L VID + G L+ F GI E + +G +PLPPYI + +D Y
Sbjct: 111 -GDGKLVGEVIDVVDEGNRLVKFEYEGI-FEEVLDELGQMPLPPYITHQ----LKDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ +G+ + +VTLHVG GTF PVKV+D +H M
Sbjct: 165 QTVYAKYDGSAAAPTAGLHFTKELLQQIKDMGVNIAYVTLHVGLGTFRPVKVDDVLEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I+ A+ +N K GGR++SVGTTS R LE+ EDG ++ SG+T+IFI PG
Sbjct: 225 HSEFYRIEEEDAELINETKKNGGRVISVGTTSTRTLESVAEEDGTLHAKSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y+F+ +D L++NFHLP+STLLMLVSA G E Y A+ YRF+S+GD +
Sbjct: 285 YKFKVIDGLITNFHLPESTLLMLVSALAGREHILNAYNIAVKERYRFFSFGDAMFIHP 342
>gi|295109865|emb|CBL23818.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Ruminococcus obeum A2-162]
Length = 341
Score = 493 bits (1269), Expect = e-137, Method: Composition-based stats.
Identities = 146/357 (40%), Positives = 201/357 (56%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R S+RL+ + +D+ +L D +V
Sbjct: 1 MKTSDFYYDLPKELIAQDPLEDRSSSRLLHLSMEDGS---FEHRHFTDILDYLKEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G + I L R + W +P K + G + F
Sbjct: 58 INDTRVIPARLYGHK----EETGALIEILLLKRKENDIWECLVKPGKKARPGAKITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L +ID + G L+ F GI E + +G +PLPPYI K +D Y
Sbjct: 111 -GDGILTGEIIDIVDEGNRLIQFHYDGI-FEEILDQLGEMPLPPYITHK----LKDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT L+ ++ G+K+ VTLHVG GTF PVKV++ + H M
Sbjct: 165 QTVYAKNDGSAAAPTAGLHFTKELMKQVEEKGVKIAHVTLHVGLGTFRPVKVDNVESHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +N K GGR++SVGTTS R LE+AT E+GI++ SG+T IFI PG
Sbjct: 225 HSEFYMVEEDQAKLINDTKKNGGRVISVGTTSCRTLESATDENGILHAGSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ +D L++NFHLP+STLLMLVSA G E Y+ A+ YRF+S+GD L+
Sbjct: 285 YKFKMIDGLITNFHLPESTLLMLVSALAGKEHIMAAYEEAVKERYRFFSFGDAMLIL 341
>gi|291542712|emb|CBL15822.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Ruminococcus bromii L2-63]
Length = 341
Score = 492 bits (1268), Expect = e-137, Method: Composition-based stats.
Identities = 139/356 (39%), Positives = 203/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ PRDS+RL+V+ + D+ +LN D +V
Sbjct: 1 MKTSDFYYDLPKELIAQTPLEPRDSSRLLVLDREKQT---LEHKHFYDIIDYLNEGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+++V+ A++ G++ + ++ L +V+ N W +P K K G F
Sbjct: 58 ANDSRVLPARIYGIK----DETGAKVEFLLLKQVANNRWETLCKPGKKAKVGTKFSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L ATV++ + G ++ F + +G +PLPPYI + +D Y
Sbjct: 111 -GNGILRATVVEVKDDGNRIVDFDCE-ENFFTTLDKIGQMPLPPYIT----AELKDKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+ GS AAPTAGLHFT+ L+ R+ + GIK+ +VTLHVG GTF PVKV+D H M
Sbjct: 165 QTVYSHELGSAAAPTAGLHFTTELMDRIKAKGIKIAYVTLHVGLGTFRPVKVDDVTKHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA+ +N K GGR+++VGTTS R LE+ G + P GFT+IFI PG
Sbjct: 225 HSEHYEVPEETAKLINETKKNGGRVIAVGTTSCRTLESVAAMYGEVKPCEGFTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ F+ +D L++NFHLP+STL+MLVSAF G + Y+ A+ YRF+S+GD +
Sbjct: 285 FEFKVLDGLITNFHLPESTLIMLVSAFAGYDFIMNAYKEAVKEKYRFFSFGDAMFI 340
>gi|225025895|ref|ZP_03715087.1| hypothetical protein EUBHAL_00123 [Eubacterium hallii DSM 3353]
gi|224956792|gb|EEG38001.1| hypothetical protein EUBHAL_00123 [Eubacterium hallii DSM 3353]
Length = 342
Score = 492 bits (1268), Expect = e-137, Method: Composition-based stats.
Identities = 151/356 (42%), Positives = 205/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F+FDLP IA P+ R S+RLMV++ I+ + D+ +L+ D +V
Sbjct: 2 MKTSDFNFDLPQELIAQDPLEDRSSSRLMVLNKESG---EIAHRIFHDITEYLHPGDCLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + I L R + W +P K + G + F
Sbjct: 59 INDTKVIPARLIGTK----EDTGAHIEILLLKRKENDVWETLVKPGKKCRPGARVVF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A ++D G L+ F GI E + +G +PLPPYI K +D Y
Sbjct: 112 -GNGELKAEIVDVLEDGNRLVHFEYEGI-FEEVLDRLGQMPLPPYITHK----LQDKNRY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ +G+ + VTLHVG GTF PVKVE+ +H M
Sbjct: 166 QTVYAKYEGSAAAPTAGLHFTKELLKQIEDMGVNIARVTLHVGLGTFRPVKVENVLEHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ +N K GGRI++VGTTS R LE+ E+GII+P G T IFI PG
Sbjct: 226 HSEYYNVTETAAKMINDTKKNGGRIIAVGTTSTRTLESVADENGIIHPGCGNTEIFIYPG 285
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+A+D L++NFHLP+STLLMLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 286 YKFKAIDCLITNFHLPESTLLMLVSALAGKEHIMAAYKEAVKERYRFFSFGDAMFI 341
>gi|239624077|ref|ZP_04667108.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239522108|gb|EEQ61974.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 358
Score = 492 bits (1267), Expect = e-137, Method: Composition-based stats.
Identities = 151/356 (42%), Positives = 214/356 (60%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+F FDLP IA P+ R S+RL+V+ + + + D+ +L D +V
Sbjct: 10 MDVKDFYFDLPEELIAQDPLKDRSSSRLLVLDKDTG---EVQHRVFRDIVEYLRPGDCLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L GV+ +I L R + W RP K + G ++ F
Sbjct: 67 INDTKVIPARLFGVK----KDTGAKIEVLLLKRRENDIWETLVRPGKKCRPGTVIEF--- 119
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L TV++ + G L+ FS GI E + +G +PLPPYI + +D Y
Sbjct: 120 -GEGLLSGTVVETVDDGNRLIRFSYKGI-FEEILDQLGQMPLPPYITH----ELKDKNRY 173
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT+ LL ++ +G+++ VTLHVG GTF PVKVE+ DH M
Sbjct: 174 QTVYAKHEGSAAAPTAGLHFTNELLKQIEDMGVRIAHVTLHVGLGTFRPVKVENVLDHHM 233
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +N K+ GGR++ VGTTS R +E+A+T+DGI+ +G+T IFI PG
Sbjct: 234 HSEFYVVEESEAKKVNDTKAAGGRVICVGTTSCRTVESASTDDGILQAKTGWTEIFIYPG 293
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 294 YRFKVLDALITNFHLPESTLVMLVSALAGREHILDAYKEAVRERYRFFSFGDAMFI 349
>gi|255526661|ref|ZP_05393566.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Clostridium
carboxidivorans P7]
gi|296187166|ref|ZP_06855563.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
carboxidivorans P7]
gi|255509641|gb|EET85976.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Clostridium
carboxidivorans P7]
gi|296048201|gb|EFG87638.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
carboxidivorans P7]
Length = 341
Score = 492 bits (1267), Expect = e-137, Method: Composition-based stats.
Identities = 145/356 (40%), Positives = 198/356 (55%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDF LP IA P+ RD ARLM++ N I + D+ +L D +V
Sbjct: 1 MKVTDFDFYLPEELIAQCPLEKRDEARLMLLDKNTG---EIEHKIFKDIIDYLEPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + +I L R+ + W +P K + G F
Sbjct: 58 LNDTRVLPARLIGSK----ENTGGKIEFLLLKRIDKDKWETLVKPGKRAQVGTRFVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A V+ G ++ F GI E + +G +PLPPYI K D Y
Sbjct: 111 -GDGELKAEVVSVEEDGNRIVKFEYEGI-FEEVLDKLGQMPLPPYIKEK----LEDKEMY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K QGS AAPTAGLHFT LL ++ G+ + F+TLHVG GTF PVKVE+ DH M
Sbjct: 165 QTVYSKEQGSAAAPTAGLHFTEELLKKIEEKGVNIAFLTLHVGLGTFRPVKVENIQDHNM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA +N + G I++VGTTS R LET ++G + SG+T+IFI PG
Sbjct: 225 HSEYYTMSKETADIINKTRKNGKSIIAVGTTSCRTLETIGNDEGEVREQSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+++ VD L++NFHLP+STL+MLVSA G E Y A+ YRF+S+GD +
Sbjct: 285 YKYKMVDKLITNFHLPESTLIMLVSALAGRENVMNAYDTAVKERYRFFSFGDAMFI 340
>gi|331091476|ref|ZP_08340314.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lachnospiraceae bacterium 2_1_46FAA]
gi|330404032|gb|EGG83582.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lachnospiraceae bacterium 2_1_46FAA]
Length = 341
Score = 492 bits (1266), Expect = e-137, Method: Composition-based stats.
Identities = 143/356 (40%), Positives = 200/356 (56%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F F+LP IA P+ R +RL+V+ H+ ++ +L D +V
Sbjct: 1 MKREDFYFELPEELIAQDPLEDRSGSRLLVLDKETGKT---EHHIFKEIVNYLEEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G + + +I L R + W +P K K G + F
Sbjct: 58 INDTKVLPARLIGSKV----GTDAKIEVLLLKRRENDVWETLVKPGKKAKVGTKIRF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ LE VID + G L+ F GI E + +G +PLPPYI + D Y
Sbjct: 111 -GEGLLEGEVIDIVDEGNRLIQFHYEGI-FEEVLDQLGQMPLPPYITHQ----LEDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + +K+ VTLHVG GTF PVKV++ +H M
Sbjct: 165 QTVYAKHTGSAAAPTAGLHFTEELLEEIAKKNVKIARVTLHVGLGTFRPVKVDNILEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ID A+ +N K +G R++ VGTTS R +E+A E+G + SG+T+IFI PG
Sbjct: 225 HSEFYQIDEEAARKINETKEQGHRVICVGTTSCRTVESAADENGRLQATSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YQFKILDCLITNFHLPESTLIMLVSALAGRENVLAAYEEAVRERYRFFSFGDAMFI 340
>gi|260438605|ref|ZP_05792421.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Butyrivibrio crossotus DSM 2876]
gi|292809196|gb|EFF68401.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Butyrivibrio crossotus DSM 2876]
Length = 341
Score = 491 bits (1265), Expect = e-137, Method: Composition-based stats.
Identities = 146/356 (41%), Positives = 206/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +K F++DLP IA P+ R S+RLMV+H + I + D+ +LN D +V
Sbjct: 1 MDLKAFNYDLPEELIAQDPLEDRSSSRLMVLHKDTG---RIEHKIFRDIIDYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G++ I L R + + W +P K + G + F
Sbjct: 58 INDTKVIPARLMGIK----EDTGAAIEVLLLKRNADDVWECLVKPGKKARTGARIVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L ++D G ++ F GI E + +G +PLPPYI K +D Y
Sbjct: 111 -GEGLLVGEIVDVIEDGNRMIKFHYEGI-FEEILDKLGQMPLPPYITHK----LQDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ G+ V +TLHVG GTF PVKV+ ++H M
Sbjct: 165 QTVYAKNEGSAAAPTAGLHFTKELLEKIKEKGVNVVSITLHVGLGTFRPVKVDKIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E I A +N ++ GGR+++VGTTS R LE+A +DG I SG T+IFI PG
Sbjct: 225 HTETFNISKEAADTINRTRAAGGRVIAVGTTSCRTLESAAADDGTIPARSGDTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+A+D L++NFHLP+STL+MLVSA G + Y+ A+ YRF+S+GD +
Sbjct: 285 YKFKAIDCLITNFHLPESTLIMLVSALAGRDNIMNAYETAVKERYRFFSFGDAMFI 340
>gi|331269240|ref|YP_004395732.1| S-adenosylmethionine--tRNA-ribosyltransferase- isomerase
[Clostridium botulinum BKT015925]
gi|329125790|gb|AEB75735.1| S-adenosylmethionine--tRNA-ribosyltransferase- isomerase
[Clostridium botulinum BKT015925]
Length = 341
Score = 491 bits (1265), Expect = e-137, Method: Composition-based stats.
Identities = 152/356 (42%), Positives = 200/356 (56%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RD +RLMVV + D+ + N D +V
Sbjct: 1 MKVKDFDFYLPEELIAQHPMEKRDESRLMVVDRKSGHR---EHKIFKDILGYFNEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + +I L R+ + W +P K K G F
Sbjct: 58 LNNTRVLPARLIGEK----ENTGGKIEFLLLKRIEGDKWETLVKPGKKAKIGARFVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A V G ++ F GI E + +G +PLPPYI K D Y
Sbjct: 111 -GSGELKAEVKGMGQDGSRIIEFEYEGI-FEEVLDRLGQMPLPPYITEKLD----DKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL + + G+K+ FVTLHVG GTF PVK ED ++H M
Sbjct: 165 QTVYSKEKGSAAAPTAGLHFTKELLKEIENKGVKIAFVTLHVGLGTFRPVKAEDIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA +N K GG+I++VGTTS R LET E+G + SG+T+IF+ PG
Sbjct: 225 HSEYYTMSKETADIINETKENGGKIIAVGTTSCRTLETIGDENGKVRETSGWTDIFMYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STLLMLVSAF E Y+ A+ YRF+S+GD L
Sbjct: 285 YKFKIVDRLITNFHLPQSTLLMLVSAFSSRENIMNAYKEAVDEKYRFFSFGDAMFL 340
>gi|150016410|ref|YP_001308664.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
beijerinckii NCIMB 8052]
gi|189038514|sp|A6LTM8|QUEA_CLOB8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|149902875|gb|ABR33708.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Clostridium beijerinckii NCIMB 8052]
Length = 341
Score = 491 bits (1264), Expect = e-137, Method: Composition-based stats.
Identities = 150/356 (42%), Positives = 204/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RDS+RLMV+ I D+ +LN D +V
Sbjct: 1 MNVKDFDFYLPEELIAQHPLEQRDSSRLMVLDKKTG---EIKHKKFHDIIEYLNEGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + +I L R+ + W A+P K K G F
Sbjct: 58 LNNTRVMPARLIGEK----EGTGGKIEFLLLKRIEKDRWECLAKPGKSAKVGRKFTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+A V++ G ++ F GI E + +G +PLPPYI + D Y
Sbjct: 111 -GEGKLKAEVVEVEENGNRIVEFFYDGI-FEEVLDSLGEMPLPPYIHER----LEDRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT LL + + GI + ++TLHVG GTF PVKVE ++H M
Sbjct: 165 QTVYSKENGSAAAPTAGLHFTKELLQEIKNKGINIVYLTLHVGLGTFRPVKVESLEEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + +A +N K RG ++SVGTTS R LET E+G + SG+TNIFI PG
Sbjct: 225 HSEFYMLSKESADIINETKKRGNAVISVGTTSTRTLETIGDENGFVKEQSGWTNIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STL+MLVS G E Y+ A++ YRF+S+GD +
Sbjct: 285 YKFKVVDKLITNFHLPESTLIMLVSTLAGRENVMNAYEEAVNEKYRFFSFGDAMFI 340
>gi|166032600|ref|ZP_02235429.1| hypothetical protein DORFOR_02315 [Dorea formicigenerans ATCC
27755]
gi|166026957|gb|EDR45714.1| hypothetical protein DORFOR_02315 [Dorea formicigenerans ATCC
27755]
Length = 341
Score = 491 bits (1264), Expect = e-137, Method: Composition-based stats.
Identities = 147/356 (41%), Positives = 197/356 (55%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F +DLP IA P+ R S+RL+V+ S H+ ++ +L D +V
Sbjct: 1 MKRQDFYYDLPEELIAQDPLEDRSSSRLLVLDKETGAT---SHHIFKEITGYLKEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + +I L R N W +P K K G + F
Sbjct: 58 INDTKVIPARLIGAK----EGTGAKIEILLLKRKENNIWETLVKPGKKAKVGTRIVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L V+ G L+ F GI E + +G +PLPPYI + D Y
Sbjct: 111 -GEGLLVGEVVGIVEEGNRLVKFEYEGI-FEEILDQLGQMPLPPYITHQ----LEDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + GI + VTLHVG GTF PVKV++ DH M
Sbjct: 165 QTVYAKHTGSAAAPTAGLHFTPELLKEIEEKGIDIARVTLHVGLGTFRPVKVDEITDHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D A+ +N K G R++ VGTTS R +E+A E G + P SG+T IFI PG
Sbjct: 225 HSEFYQVDEEAAEKINRAKDSGHRVICVGTTSCRTIESAADETGHLKPTSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD L+
Sbjct: 285 YKFKILDGLITNFHLPESTLIMLVSALAGREHVLAAYEEAVQERYRFFSFGDAMLI 340
>gi|125973476|ref|YP_001037386.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
thermocellum ATCC 27405]
gi|256005374|ref|ZP_05430339.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Clostridium
thermocellum DSM 2360]
gi|281417678|ref|ZP_06248698.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Clostridium
thermocellum JW20]
gi|166216717|sp|A3DE14|QUEA_CLOTH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|125713701|gb|ABN52193.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Clostridium thermocellum ATCC 27405]
gi|255990693|gb|EEU00810.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Clostridium
thermocellum DSM 2360]
gi|281409080|gb|EFB39338.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Clostridium
thermocellum JW20]
gi|316940286|gb|ADU74320.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Clostridium
thermocellum DSM 1313]
Length = 341
Score = 490 bits (1263), Expect = e-136, Method: Composition-based stats.
Identities = 155/356 (43%), Positives = 209/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F +DLP IA PV RD +RLMV+ IS D+ ++N D +V
Sbjct: 1 MKVSDFYYDLPQELIAQEPVEKRDMSRLMVLDKETGK---ISHKRFKDIVEYINKGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G + +I L R++ + W V +P K K G F
Sbjct: 58 LNDTRVIPARLLGEK----EGTGGKIEFVLLKRINGDVWEVILKPGKKAKPGARFVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A VI+ G L+ F GI E + +G +PLPPYI +K D Y
Sbjct: 111 -GNGELKAEVIEIVEEGNRLVRFEYDGI-FEEILDRIGIVPLPPYITKKLD----DAERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ +GS AAPTAGLHFT LL L G+K+ +VTLHVG GTF PVKVE+ ++H M
Sbjct: 165 QTVYSRYKGSAAAPTAGLHFTLELLEELAGRGVKIAYVTLHVGLGTFRPVKVENLEEHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I +NS K GG+I++VGTTS R+LET E+GI+ P SG+T+IFI PG
Sbjct: 225 HSEFYRIKEEDCDKINSTKQNGGKIIAVGTTSCRVLETVGDENGIVRPQSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STL+MLVSA G E+ + Y A+ YRF+S+GD +
Sbjct: 285 YKFKVVDSLITNFHLPESTLIMLVSALAGREKILEAYNIAVKERYRFFSFGDAMFI 340
>gi|331083879|ref|ZP_08332988.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lachnospiraceae bacterium 6_1_63FAA]
gi|330403304|gb|EGG82864.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lachnospiraceae bacterium 6_1_63FAA]
Length = 341
Score = 490 bits (1263), Expect = e-136, Method: Composition-based stats.
Identities = 151/356 (42%), Positives = 204/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R S+RLM + I + +LN D +V
Sbjct: 1 MRTADFYYDLPEELIAQDPLLDRSSSRLMHLDKQTG---EICHTDFKHIIDYLNPEDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G + + I L R N W +P K K G + F
Sbjct: 58 INDTRVIPARLYGSKV----GTDAGIEILLLKRRENNIWETLVKPGKKAKPGTKISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L V+D G L+ F GI E + +G +PLPPYI K +D Y
Sbjct: 111 -GDGLLIGEVLDIVEEGNRLIQFQYEGI-FEEILDKLGEMPLPPYITHK----LQDKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL + G+K+ VTLHVG GTF PVKV+D + H M
Sbjct: 165 QTVYAKNEGSAAAPTAGLHFTKELLKEIEEKGVKIAHVTLHVGLGTFRPVKVDDVESHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +N K++GGR++SVGTTS R LE+AT E+GI+ SG+T+IFI PG
Sbjct: 225 HSEFYVVEEEQAKIINETKAKGGRVISVGTTSCRTLESATDENGILQAKSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STLLMLVSA G E+ Y+ A+ YRF+S+GD ++
Sbjct: 285 YQFKMIDALITNFHLPESTLLMLVSALAGKEKIMNAYEEAVKERYRFFSFGDAMII 340
>gi|260587878|ref|ZP_05853791.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Blautia
hansenii DSM 20583]
gi|260542143|gb|EEX22712.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Blautia
hansenii DSM 20583]
Length = 355
Score = 490 bits (1262), Expect = e-136, Method: Composition-based stats.
Identities = 151/356 (42%), Positives = 204/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R S+RLM + I + +LN D +V
Sbjct: 15 MRTADFYYDLPEELIAQDPLLDRSSSRLMHLDKQTG---EICHTDFKHIIDYLNPEDCLV 71
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G + + I L R N W +P K K G + F
Sbjct: 72 INDTRVIPARLYGSKV----GTDAGIEILLLKRRENNIWETLVKPGKKAKPGTKISF--- 124
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L V+D G L+ F GI E + +G +PLPPYI K +D Y
Sbjct: 125 -GDGLLIGEVLDIVEEGNRLIQFQYEGI-FEEILDKLGEMPLPPYITHK----LQDKERY 178
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL + G+K+ VTLHVG GTF PVKV+D + H M
Sbjct: 179 QTVYAKNEGSAAAPTAGLHFTKELLKEIEEKGVKIAHVTLHVGLGTFRPVKVDDVESHHM 238
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +N K++GGR++SVGTTS R LE+AT E+GI+ SG+T+IFI PG
Sbjct: 239 HSEFYVVEEEQAKIINETKAKGGRVISVGTTSCRTLESATDENGILQAKSGWTDIFIYPG 298
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STLLMLVSA G E+ Y+ A+ YRF+S+GD ++
Sbjct: 299 YQFKMIDALITNFHLPESTLLMLVSALAGKEKIMNAYEEAVKERYRFFSFGDAMII 354
>gi|226323649|ref|ZP_03799167.1| hypothetical protein COPCOM_01424 [Coprococcus comes ATCC 27758]
gi|225207833|gb|EEG90187.1| hypothetical protein COPCOM_01424 [Coprococcus comes ATCC 27758]
Length = 341
Score = 490 bits (1261), Expect = e-136, Method: Composition-based stats.
Identities = 144/356 (40%), Positives = 200/356 (56%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F FDLP IA P+ R S+RL+V+ S H+ ++ +L D +V
Sbjct: 1 MKRQDFYFDLPEELIAQDPLEDRSSSRLLVLDKKTGAT---SHHIFREIKDYLKPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + ++ L R + W +P K +K G + F
Sbjct: 58 INDTKVIPARLIGEK----EGTGGKVEVLLLKRKGNDVWETLVKPGKKMKPGARVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+ V++ G L+ F GI E + +G +PLPPYI + D Y
Sbjct: 111 -GDGLLKGEVLEVVEEGNRLIHFEYEGI-FEEILDQLGQMPLPPYITHQ----LEDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + + G+++ VTLHVG GTF PVK +D DH M
Sbjct: 165 QTVYAKHSGSAAAPTAGLHFTPELLEEIKAEGVEIAHVTLHVGLGTFRPVKADDILDHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I+A A+ +N K G R++ VGTTS R +E+A E+G + SG+T IFI PG
Sbjct: 225 HSEFYRIEASEAEKINRAKESGHRVICVGTTSCRTVESAADENGKLKECSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YKFKVLDCLITNFHLPESTLIMLVSALAGREHVLAAYEEAVKERYRFFSFGDAMFI 340
>gi|153810635|ref|ZP_01963303.1| hypothetical protein RUMOBE_01019 [Ruminococcus obeum ATCC 29174]
gi|149833031|gb|EDM88113.1| hypothetical protein RUMOBE_01019 [Ruminococcus obeum ATCC 29174]
Length = 341
Score = 489 bits (1260), Expect = e-136, Method: Composition-based stats.
Identities = 149/357 (41%), Positives = 202/357 (56%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R S+RL+ + +D+ +L+ D +V
Sbjct: 1 MKTSDFYYDLPKELIAQDPLEDRSSSRLLHLSMQDGS---FEHRHFTDILDYLHKGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + I L R + W +P K + G + F
Sbjct: 58 INDTKVIPARLYGHK----EETGAVIEILLLKRRENDIWECLVKPGKKARPGAKITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+ +ID + G L+ F GI E + +G +PLPPYI K +D Y
Sbjct: 111 -GDGILKGEIIDVVDEGNRLIQFHYDGI-FEEILDQLGEMPLPPYITHK----LKDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ +G+K+ VTLHVG GTF PVKV+D + H M
Sbjct: 165 QTVYAKNDGSAAAPTAGLHFTRELLKQVEDMGVKIAHVTLHVGLGTFRPVKVDDVEQHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +N K GGR++SVGTTS R LE+AT E+GI+ SG+T IFI PG
Sbjct: 225 HSEFYMVEEDQAKLINDTKKNGGRVISVGTTSCRTLESATDENGILQAGSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+ +D L++NFHLP+STLLMLVSA G E Y+ A+ YRF+S+GD L+
Sbjct: 285 YHFKMIDGLITNFHLPESTLLMLVSALAGKEHIMAAYEEAVKERYRFFSFGDAMLII 341
>gi|300856544|ref|YP_003781528.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
ljungdahlii DSM 13528]
gi|300436659|gb|ADK16426.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
ljungdahlii DSM 13528]
Length = 344
Score = 488 bits (1258), Expect = e-136, Method: Composition-based stats.
Identities = 148/356 (41%), Positives = 205/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ V +FDF LP IA P+ RD ARLMV+ I + D+ +LN D +V
Sbjct: 4 LKVTDFDFYLPEELIAQHPLMQRDEARLMVLDKKTGD---IEHKVFKDILDYLNPGDCLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + ++ L R + ++W +P K K G F
Sbjct: 61 LNDTRVLPARLIGSK----EGSGGKMEILLLKRNADDTWETLVKPGKRAKVGSRFDF--- 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A ++ G ++ F GI E + +G +PLPPYI K D Y
Sbjct: 114 -GDGELKAEIVSVKEDGNRIVKFEYEGI-FEEVLDRLGQMPLPPYIKEK----LEDKEMY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL ++ GIK+ F+TLHVG GTF PVKVE+ ++H M
Sbjct: 168 QTVYSKEEGSAAAPTAGLHFTKELLKKIEDKGIKLAFLTLHVGLGTFRPVKVENIEEHNM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA +N + +GG I++VGTTS R LET E+G + SG+T+IFI PG
Sbjct: 228 HSEYYCMTKETADMINETREKGGSIIAVGTTSCRTLETIGDENGKVREQSGWTDIFIYPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+++ VD L++NFHLP+STL+MLVSA CG E+ Y A+ YRF+S+GD L
Sbjct: 288 YKYKVVDKLITNFHLPQSTLIMLVSALCGREKILNAYNCAVKEKYRFFSFGDAMFL 343
>gi|182418567|ref|ZP_02949847.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
butyricum 5521]
gi|237667777|ref|ZP_04527761.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
butyricum E4 str. BoNT E BL5262]
gi|182377570|gb|EDT75121.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
butyricum 5521]
gi|237656125|gb|EEP53681.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
butyricum E4 str. BoNT E BL5262]
Length = 341
Score = 488 bits (1258), Expect = e-136, Method: Composition-based stats.
Identities = 151/356 (42%), Positives = 209/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RD++RLMV+ I + D+ +LN+ D +V
Sbjct: 1 MNVKDFDFYLPEELIAQHPLEKRDTSRLMVLDKKTG---EIEHKVFHDIVDYLNAGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + +I L RV + W A+P K + G F
Sbjct: 58 LNNTRVMPARLIGEK----EETGGKIEFLLLKRVEKDRWECLAKPGKSARVGRKFTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+A V++ G ++ F GI E + +G +PLPPYI + D Y
Sbjct: 111 -GEGKLKAEVVEVKENGNRIVEFHYEGI-FEEVLDSLGEMPLPPYIHER----LEDRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT+ LL ++ GI V ++TLHVG GTF PVKVE+ ++H M
Sbjct: 165 QTVYSKENGSAAAPTAGLHFTNQLLEQIKEKGINVVYLTLHVGLGTFRPVKVENLEEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + +A +N K GGR++SVGTTS R LET E+G++ SG+TNIFI PG
Sbjct: 225 HSEFYMLSKESADIINETKRNGGRVISVGTTSTRTLETIGDENGLVKEQSGWTNIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STL+MLVS G E Y+ A+ YRF+S+GD +
Sbjct: 285 YKFKVVDNLITNFHLPESTLIMLVSTLAGKEHVMNAYKTAVEEKYRFFSFGDAMFI 340
>gi|210622017|ref|ZP_03292960.1| hypothetical protein CLOHIR_00906 [Clostridium hiranonis DSM 13275]
gi|210154462|gb|EEA85468.1| hypothetical protein CLOHIR_00906 [Clostridium hiranonis DSM 13275]
Length = 350
Score = 488 bits (1258), Expect = e-136, Method: Composition-based stats.
Identities = 144/356 (40%), Positives = 199/356 (55%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +F+FDLP IA P+ R ++RLMV+ I + D+ +L D +V
Sbjct: 10 LKTSDFNFDLPQELIAQTPIEDRSASRLMVLDKETG---EIEHKIFRDIKEYLKPGDCLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G + +I L R + ++W +P K K G F
Sbjct: 67 LNDTRVIPARLIGEKV----DTGGKIEFLLLKRNTDDTWESLVKPGKRAKIGTKFSF--- 119
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L V+ + G ++ F GI E + +G +PLPPYI K + Y
Sbjct: 120 -GGGKLIGEVVGMADEGARIIKFHYDGI-FEEILDELGNMPLPPYITEK----LEEKERY 173
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT+ LL + +G+ + FVTLHVG GTF PVKV+D +H M
Sbjct: 174 QTVYSKHNGSAAAPTAGLHFTNELLEEIKEMGVDIAFVTLHVGLGTFRPVKVDDVLNHEM 233
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +N K G R++ VGTTS R +E+A EDG + SG+TNIFI PG
Sbjct: 234 HSEFYMVTQEAADKINKAKENGNRVICVGTTSCRTIESAAEEDGHMTAKSGWTNIFIYPG 293
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA CG E Y AI YRF+S+GD +
Sbjct: 294 YKFKVLDNLITNFHLPESTLIMLVSALCGREHVLNAYNEAIKERYRFFSFGDAMFI 349
>gi|302385235|ref|YP_003821057.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Clostridium
saccharolyticum WM1]
gi|302195863|gb|ADL03434.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Clostridium
saccharolyticum WM1]
Length = 349
Score = 488 bits (1258), Expect = e-136, Method: Composition-based stats.
Identities = 152/357 (42%), Positives = 210/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++F+F+LP IA P+ R ++RL+V+ + I D+ ++L D +V
Sbjct: 1 MNVRDFNFNLPQELIAQDPLEDRSASRLLVLDKHTG---EIQHRHFRDILSYLRKGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L GV+ E +I L R + W +P K K G ++ F
Sbjct: 58 INDTKVIPARLFGVK----EGTEAKIEILLLKRRENDIWETLVKPGKKAKMGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L+ TVID G L+ FS GI E + +G +PLPPYI + +D Y
Sbjct: 111 -GEGLLKGTVIDVVEEGNRLIQFSYEGI-FEEILDRLGQMPLPPYITHQ----LKDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL + +G+ + VTLHVG GTF PVKV++ + H M
Sbjct: 165 QTVYAKHEGSAAAPTAGLHFTKELLKEIEDMGVSIAHVTLHVGLGTFRPVKVDEIEAHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +N K GGRIV VGTTS R +E+A+ DG++ SG+T IFI PG
Sbjct: 225 HSEFYMVEEEEARKVNDAKKNGGRIVCVGTTSCRTVESASGSDGMLRAGSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YRF+ +D L++NFHLP+STL+MLVSA G + Y+ AI YRF+S+GD L
Sbjct: 285 YRFKLLDCLITNFHLPESTLVMLVSALAGRDHVLHAYEEAIKERYRFFSFGDAMFLT 341
>gi|167761168|ref|ZP_02433295.1| hypothetical protein CLOSCI_03573 [Clostridium scindens ATCC 35704]
gi|167660834|gb|EDS04964.1| hypothetical protein CLOSCI_03573 [Clostridium scindens ATCC 35704]
Length = 343
Score = 488 bits (1258), Expect = e-136, Method: Composition-based stats.
Identities = 145/356 (40%), Positives = 200/356 (56%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F ++LP IA P+ R S+RL+V+ +S H+ ++ +L+ D +V
Sbjct: 1 MKRQDFYYELPEELIAQDPLEDRSSSRLLVLDKESGA---VSHHVFKEITDYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + E +I L R N W +P K K G + F
Sbjct: 58 INDTKVIPARLIGSKV----GTEAKIEILLLKRKENNIWETLVKPGKKAKIGTKISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L V+D + G L+ F+ GI E + +G +PLPPYI + D Y
Sbjct: 111 -GEGLLVGEVVDIVDEGNRLIQFTYEGI-FEEILDKLGQMPLPPYITHQ----LEDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA GS AAPTAGLHFT LL + GI + +TLHVG GTF PVKV++ +H M
Sbjct: 165 QTVYATHTGSAAAPTAGLHFTPELLEEIERKGIDIARITLHVGLGTFRPVKVDEITEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ID A +N K G R++ VGTTS R +E+A E G + SG+T IFI PG
Sbjct: 225 HSEFFQIDEEAAMKINRAKDSGKRVICVGTTSCRTIESAADETGHLKACSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD L+
Sbjct: 285 YQFKILDCLITNFHLPESTLIMLVSALAGREHVLAAYEEAVKERYRFFSFGDAMLI 340
>gi|188589166|ref|YP_001920353.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum E3 str. Alaska E43]
gi|251778245|ref|ZP_04821165.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum E1 str. 'BoNT E Beluga']
gi|238689663|sp|B2V339|QUEA_CLOBA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|188499447|gb|ACD52583.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum E3 str. Alaska E43]
gi|243082560|gb|EES48450.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum E1 str. 'BoNT E Beluga']
Length = 341
Score = 488 bits (1258), Expect = e-136, Method: Composition-based stats.
Identities = 154/356 (43%), Positives = 204/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RD++RLMV+ IS D+ +LN D +V
Sbjct: 1 MNVKDFDFYLPEELIAQHPLEKRDTSRLMVLDKETG---EISHKNFYDIIDYLNEGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + +I L RV + W A+P K + G F
Sbjct: 58 LNNTRVMPARLIGEK----EGTGGKIEFLLLKRVDKDRWECLAKPGKSARVGRRFTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L+A V++ G ++ F GI E + +G +PLPPYI + D Y
Sbjct: 111 -GDGKLKAEVVEVKENGNRIVEFYYEGI-FEEVLDSLGEMPLPPYIHER----LEDRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT LL ++ GI + +VTLHVG GTF PVKVE +DH M
Sbjct: 165 QTVYSKENGSAAAPTAGLHFTEELLHKIKEKGINIAYVTLHVGLGTFRPVKVETIEDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ +N K RG R++SVGTTS R LET EDG + SG+TNIFI PG
Sbjct: 225 HSEYYHLSKEDAEVINETKKRGNRVISVGTTSTRTLETIADEDGNVKETSGWTNIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STL+MLVS G E Y+ A+ YRF+S+GD +
Sbjct: 285 YKFKVVDRLITNFHLPESTLIMLVSTLAGKEHVMNAYEEAVKERYRFFSFGDAMFI 340
>gi|291519050|emb|CBK74271.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Butyrivibrio fibrisolvens 16/4]
Length = 345
Score = 488 bits (1258), Expect = e-136, Method: Composition-based stats.
Identities = 146/357 (40%), Positives = 205/357 (57%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+VK+FD++LP IA P+ R ++RLMV+ + I+ D+ +L D +V
Sbjct: 1 MLVKDFDYELPEELIAQDPLEKRSNSRLMVLDKHTG---EIAHRHFYDIKEYLRPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G R ++ L R+S N W +P K + G + F
Sbjct: 58 INNTRVIPARLYGARV----GSGGKVEILLLKRISDNQWECLVKPGKKARPGMEISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L ++D + G ++ F+ GI E + +G +PLPPYI K +D Y
Sbjct: 111 -GDGLLIGKIVDIVDEGNRIIEFTYEGI-FEEILDKLGEMPLPPYITHK----LQDRDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + ++G+++ VTLHVG GTF PVK ++ DH M
Sbjct: 165 QTVYAKFDGSAAAPTAGLHFTPELLEEVKAMGVRIAEVTLHVGLGTFRPVKEDEVLDHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I +N K+ GGR++SVGTTS R LE+A ++P SG+T IFI PG
Sbjct: 225 HSEYYEITQEACDIINETKANGGRVISVGTTSTRTLESAAEAGKPLSPKSGWTQIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD ++
Sbjct: 285 YEFKVIDCLITNFHLPQSTLIMLVSALAGREHVLAAYKKAVEEKYRFFSFGDAMMIT 341
>gi|307244210|ref|ZP_07526325.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Peptostreptococcus stomatis DSM 17678]
gi|306492360|gb|EFM64398.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Peptostreptococcus stomatis DSM 17678]
Length = 341
Score = 488 bits (1257), Expect = e-136, Method: Composition-based stats.
Identities = 145/356 (40%), Positives = 196/356 (55%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R S+RLMVV N I + D+ +L D +V
Sbjct: 1 MKTSDFKYDLPEELIAQVPIEDRSSSRLMVVDKNTG---QIEHRVFKDIIDYLEEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G + ++ L R ++W +P K K G F
Sbjct: 58 LNDTRVIPARLIGEKV----GSGGKMEFLLLKRNEDDTWETLVKPGKRAKLGARFSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L A V+D G L+ F GI E + +G +PLPPYI K D Y
Sbjct: 111 -GGGKLFADVVDILEDGSRLVKFDYDGI-FEEILDELGNMPLPPYITEK----LEDKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT LL ++ + G+K FVTLHVG GTF PVKV+D H M
Sbjct: 165 QTVYSKHNGSAAAPTAGLHFTDQLLDQIRAKGVKTAFVTLHVGLGTFRPVKVDDVGQHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +N + + R++ VGTTS R +E+A+ DG + SG+T+IFI PG
Sbjct: 225 HSEFYMVTQEAADMINEARVKSKRVICVGTTSCRTIESASKPDGRLEAKSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ D L++NFHLP+STL+MLVSA E Y+ A+ YRF+S+GD L
Sbjct: 285 YKFKVCDNLITNFHLPESTLIMLVSALSSKENILNAYKSAVEERYRFFSFGDAMFL 340
>gi|158320752|ref|YP_001513259.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Alkaliphilus oremlandii OhILAs]
gi|158140951|gb|ABW19263.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Alkaliphilus oremlandii OhILAs]
Length = 341
Score = 488 bits (1256), Expect = e-136, Method: Composition-based stats.
Identities = 156/356 (43%), Positives = 205/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M K+FD+DLP IA P+ RD +RLMV+ I+ D+ FLN D +V
Sbjct: 1 METKDFDYDLPEELIAQVPLEHRDQSRLMVLDKETGD---IAHRHFYDIIDFLNEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + +I L R+ ++W +P K K G F
Sbjct: 58 LNDTRVLPARLIGEK----EGSGGKIEFLLLKRIELDTWEALVKPGKKAKVGSRFIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL VI G ++ F G+ E + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLCTEVIGIGEEGSRIIKFQYDGV-FEDILDQLGQMPLPPYITEK----LEDKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K QGS AAPTAGLHFTS LL +L G+K ++TLHVG GTF PVKVE ++H M
Sbjct: 165 QTVYSKNQGSAAAPTAGLHFTSELLKKLEEKGVKTAYITLHVGLGTFRPVKVEKIEEHTM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ID A +N K+ G RI++VGTTS R LE+ T+DGII P SG+T+IFI PG
Sbjct: 225 HSEFYTIDDKNANIINEAKANGKRIIAVGTTSCRTLESVATKDGIIEPKSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+ VD L++NFHLP+STL+MLVS G E T Y+ A+ YRF+S+GD +
Sbjct: 285 YDFKIVDNLITNFHLPESTLIMLVSTLAGKEATLNAYKIAVKEGYRFFSFGDAMFI 340
>gi|168179563|ref|ZP_02614227.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum NCTC 2916]
gi|168181759|ref|ZP_02616423.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum Bf]
gi|226950498|ref|YP_002805589.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum A2 str. Kyoto]
gi|237796525|ref|YP_002864077.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum Ba4 str. 657]
gi|254764272|sp|C1FKG0|QUEA_CLOBJ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|259551441|sp|C3KTD1|QUEA_CLOB6 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|182669806|gb|EDT81782.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum NCTC 2916]
gi|182675035|gb|EDT86996.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum Bf]
gi|226842049|gb|ACO84715.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum A2 str. Kyoto]
gi|229263462|gb|ACQ54495.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum Ba4 str. 657]
Length = 341
Score = 488 bits (1256), Expect = e-136, Method: Composition-based stats.
Identities = 149/356 (41%), Positives = 204/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RD ARL+V+ I + D+ +L ND +V
Sbjct: 1 MKVKDFDFYLPEELIAQHPMEKRDEARLLVLDKKTGG---IEHKIFKDILDYLTPNDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + ++ L R + W +P K + G F
Sbjct: 58 LNNTRVLPARLIGAK----EETGGKMEFLLLKRKEKDVWETLVKPGKRAQIGARFIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A VI G ++ F GI E + +G +PLPPYI K D Y
Sbjct: 111 -GNGELKAEVIGMGEEGSRIVKFYYEGI-FEEILDQLGQMPLPPYIKEKLD----DKEMY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL ++ G+K+ F+TLHVG GTF PVKVE+ +H+M
Sbjct: 165 QTVYSKEEGSAAAPTAGLHFTEELLKKIKEKGVKLAFLTLHVGLGTFRPVKVENIQEHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D TA+ +N K +GGR+++VGTTS R LET +G + SG+T+IFI PG
Sbjct: 225 HSEYYKMDKETAEIINDTKEKGGRVIAVGTTSCRTLETIGDIEGKVREQSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+++ VD L++NFHLP+STLLMLVSA G + Y A+ YRF+S+GD +
Sbjct: 285 YKYKVVDALITNFHLPQSTLLMLVSALAGRDNIMNAYNVAVEKEYRFFSFGDAMFI 340
>gi|160893033|ref|ZP_02073821.1| hypothetical protein CLOL250_00571 [Clostridium sp. L2-50]
gi|156865116|gb|EDO58547.1| hypothetical protein CLOL250_00571 [Clostridium sp. L2-50]
Length = 349
Score = 488 bits (1256), Expect = e-136, Method: Composition-based stats.
Identities = 151/357 (42%), Positives = 205/357 (57%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F +DLP IA P+ RD++RLMV+ I D+ ++L D +V
Sbjct: 9 MQLSDFYYDLPQELIAQDPLLKRDNSRLMVLDREEGT---IEHKHFYDVISYLKEGDCLV 65
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + I L R+ +W +P K + G + F
Sbjct: 66 INDTKVIPARLIGEK----EGTGAAIEVLLLKRLDDCTWETLVKPGKKARVGARIIF--- 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L VID G ++ F GI E + +G +PLPPYI K D Y
Sbjct: 119 -GGGKLVGEVIDIVEEGNRIVRFEYEGI-FEEILDELGQMPLPPYITHK----LEDKNRY 172
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +GS AAPTAGLHFT LL + + GIK+ VTLHVG GTF PVK ++ DH M
Sbjct: 173 QTVYAEHEGSAAAPTAGLHFTKELLEEIKAKGIKIAHVTLHVGLGTFRPVKEDNILDHHM 232
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ID A+ +N K GGRI++VGTTS R LET E+G++ SG+T+IFI PG
Sbjct: 233 HSEFYVIDEKAAETINETKKNGGRIIAVGTTSTRTLETVADENGMLRACSGWTDIFIYPG 292
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+A+D L++NFHLP+STLLMLVSA E+ + Y+ A+ YRF+S+GD L+
Sbjct: 293 YKFKAIDGLITNFHLPESTLLMLVSALYSREKILEAYKVAVEERYRFFSFGDAMLIL 349
>gi|240146016|ref|ZP_04744617.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseburia
intestinalis L1-82]
gi|257201829|gb|EEV00114.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseburia
intestinalis L1-82]
gi|291536123|emb|CBL09235.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Roseburia
intestinalis M50/1]
Length = 345
Score = 488 bits (1256), Expect = e-136, Method: Composition-based stats.
Identities = 153/357 (42%), Positives = 202/357 (56%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+F +DLP IA P+ R S+RLMV+ N ++ + D+ +L D +V
Sbjct: 1 MDVKDFYYDLPQELIAQDPLEDRSSSRLMVLDKNTG---EVTHRVFKDITDYLRPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L GV+ E +I L R + W +P K K G + F
Sbjct: 58 INNTKVIPARLYGVK----EGTEAKIEILLLKRKENDIWETLVKPGKKCKVGTKISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L VID G L+ F GI E + +G +PLPPYI + +D Y
Sbjct: 111 -GDGLLTGEVIDIVEEGNRLIQFHYDGI-FEEILDQLGQMPLPPYITHQ----LQDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ +G+++ VTLHVG GTF PVK D H M
Sbjct: 165 QTVYAKYDGSAAAPTAGLHFTPELLKKVKEMGVEIAEVTLHVGLGTFRPVKETDVLKHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I+ A +N K G R+++VGTTS R LE A+ E+G + SG+T IFI PG
Sbjct: 225 HSEFYRIEQSEADKINHAKETGHRVIAVGTTSTRTLEAASDENGFLRETSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YRF+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD L+
Sbjct: 285 YRFKVIDSLITNFHLPESTLVMLVSALAGREHVLNAYEIAVQEKYRFFSFGDAMLIT 341
>gi|291539017|emb|CBL12128.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Roseburia
intestinalis XB6B4]
Length = 345
Score = 487 bits (1255), Expect = e-135, Method: Composition-based stats.
Identities = 153/357 (42%), Positives = 202/357 (56%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+F +DLP IA P+ R S+RLMV+ N ++ + D+ +L D +V
Sbjct: 1 MDVKDFYYDLPQELIAQDPLKDRSSSRLMVLDKNTG---EVTHRVFKDITDYLRPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L GV+ E +I L R + W +P K K G + F
Sbjct: 58 INNTKVIPARLYGVK----EGTEAKIEILLLKRKENDIWETLVKPGKKCKVGTKISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L VID G L+ F GI E + +G +PLPPYI + +D Y
Sbjct: 111 -GDGLLTGEVIDIVEEGNRLIQFHYDGI-FEEILDQLGQMPLPPYITHQ----LQDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ +G+++ VTLHVG GTF PVK D H M
Sbjct: 165 QTVYAKYDGSAAAPTAGLHFTPELLKKVKEMGVEIAEVTLHVGLGTFRPVKETDVLKHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I+ A +N K G R+++VGTTS R LE A+ E+G + SG+T IFI PG
Sbjct: 225 HSEFYRIEQSEADKINHAKETGHRVIAVGTTSTRTLEAASDENGFLRETSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YRF+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD L+
Sbjct: 285 YRFKVIDSLITNFHLPESTLVMLVSALAGREHVLNAYEIAVQEKYRFFSFGDAMLIT 341
>gi|154505813|ref|ZP_02042551.1| hypothetical protein RUMGNA_03353 [Ruminococcus gnavus ATCC 29149]
gi|153793831|gb|EDN76251.1| hypothetical protein RUMGNA_03353 [Ruminococcus gnavus ATCC 29149]
Length = 341
Score = 487 bits (1254), Expect = e-135, Method: Composition-based stats.
Identities = 145/357 (40%), Positives = 197/357 (55%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R +RL+ + H+ D+ +LN D +V
Sbjct: 1 MKTSDFYYDLPEELIAQDPLEDRSGSRLLFLDKETGKT---EHHIFRDVIDYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + +I L R + W +P K K G + F
Sbjct: 58 INDTKVIPARLIGEK----EGTGAKIEVLLLKRGENDVWETLVKPGKKAKPGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L V+D G L+ F GI E + +G +PLPPYI + D Y
Sbjct: 111 -GEGLLVGEVVDVVEEGNRLIHFEYKGI-FEEILDQLGQMPLPPYITHQ----LEDRSRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
T YA +GS AAPTAGLHFT LL + G+ + VTLHVG GTF PVKVED +H M
Sbjct: 165 NTVYAAHEGSAAAPTAGLHFTPKLLKEIQEKGVDIARVTLHVGLGTFRPVKVEDVTEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +DA A+ +N K GGR++ VGTTS R +E+A E+G + P SG+T IFI PG
Sbjct: 225 HSEFYMVDAEAAEKINKAKEHGGRVICVGTTSCRTIESAADENGRLKPCSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD ++
Sbjct: 285 YQFKILDGLITNFHLPESTLIMLVSALAGKEHVMAAYEEAVKERYRFFSFGDAMIIL 341
>gi|170761651|ref|YP_001788389.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum A3 str. Loch Maree]
gi|238688788|sp|B1L0B1|QUEA_CLOBM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|169408640|gb|ACA57051.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum A3 str. Loch Maree]
Length = 341
Score = 487 bits (1254), Expect = e-135, Method: Composition-based stats.
Identities = 150/356 (42%), Positives = 204/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RD ARL+V+ I + D+ +L ND +V
Sbjct: 1 MKVKDFDFYLPEELIAQHPMEKRDEARLLVLDKETG---EIEHKIFKDILDYLTPNDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + ++ L R + W +P K + G F
Sbjct: 58 LNNTRVLPARLIGAK----EETGGKMEFLLLKRKEKDVWETLVKPGKRAQIGARFIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A VI G ++ F GI E + +G +PLPPYI K D Y
Sbjct: 111 -GNGELKAEVIGMGEEGSRIVKFYYEGI-FEEILDQLGQMPLPPYIKEKLD----DKEMY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL ++ G+K+ F+TLHVG GTF PVKVED +H+M
Sbjct: 165 QTVYSKEEGSAAAPTAGLHFTEELLKKIKEKGVKLAFLTLHVGLGTFRPVKVEDIQEHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D TA+ +N K +GGR+++VGTTS R LET +G + SG+T+IFI PG
Sbjct: 225 HSEYYKMDKETAEIINDTKEKGGRVIAVGTTSCRTLETIGDIEGKVREQSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+++ VD L++NFHLP+STLLMLVSA G + Y A+ YRF+S+GD +
Sbjct: 285 YKYKVVDALITNFHLPQSTLLMLVSALAGRDNIMNAYNVAVEKEYRFFSFGDAMFI 340
>gi|225378183|ref|ZP_03755404.1| hypothetical protein ROSEINA2194_03843 [Roseburia inulinivorans DSM
16841]
gi|225209989|gb|EEG92343.1| hypothetical protein ROSEINA2194_03843 [Roseburia inulinivorans DSM
16841]
Length = 345
Score = 487 bits (1254), Expect = e-135, Method: Composition-based stats.
Identities = 149/360 (41%), Positives = 200/360 (55%), Gaps = 16/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+F +DLP IA P+ R S+RLMV+ + D+ +L D +V
Sbjct: 1 MDVKDFYYDLPQELIAQDPLEDRSSSRLMVLDKITG---EVEHRHFKDITEYLRPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L GV+ E +I L R + W +P K K G + F
Sbjct: 58 INNTKVIPARLYGVK----EGTEAKIEILLLKRKENDIWETLVKPGKKCKIGTKIVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L V+D G L+ F GI E + +G +PLPPYI + +D Y
Sbjct: 111 -GEGILTGEVVDIVEEGNRLIQFHYEGI-FEEILDRLGQMPLPPYITHQ----LQDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ +G+++ VTLHVG GTF PVK D H M
Sbjct: 165 QTVYAKYDGSAAAPTAGLHFTPELLQQVRDMGVEIAEVTLHVGLGTFRPVKETDVLKHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I+ A +N K G R+++VGTTS R LE+A E+G + SG+T IFI PG
Sbjct: 225 HSEFYKIEQSEADKINKAKKEGHRVIAVGTTSTRTLESAADENGFLTEKSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
Y+F+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD + +
Sbjct: 285 YQFKVIDALITNFHLPESTLVMLVSALAGREHVLAAYETAVEEKYRFFSFGDAMFIVDRE 344
>gi|170757777|ref|YP_001782704.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum B1 str. Okra]
gi|229598025|sp|B1IMF2|QUEA_CLOBK RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|169122989|gb|ACA46825.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum B1 str. Okra]
Length = 341
Score = 487 bits (1253), Expect = e-135, Method: Composition-based stats.
Identities = 150/356 (42%), Positives = 203/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RD ARL+V+ I + D+ +L ND +V
Sbjct: 1 MKVKDFDFYLPEELIAQHPMEKRDEARLLVLDKETG---EIEHKIFKDILDYLTPNDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + ++ L R + W +P K + G F
Sbjct: 58 LNNTRVLPARLIGSK----EETGGKMEFLLLKRKEKDVWETLVKPGKRAQIGARFIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A VI G ++ F GI E + +G +PLPPYI K D Y
Sbjct: 111 -GNGELKAEVIGMGEEGSRIVKFYYEGI-FEEILDQLGQMPLPPYIKEKLD----DKEMY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL ++ G+K+ F+TLHVG GTF PVKVED +H+M
Sbjct: 165 QTVYSKEEGSAAAPTAGLHFTEELLKKIEEKGVKLAFLTLHVGLGTFRPVKVEDIQEHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D TA+ +N K GGR+++VGTTS R LET +G + SG+T+IFI PG
Sbjct: 225 HSEYYKMDKKTAEIINDTKENGGRVIAVGTTSCRTLETIADIEGKVGEQSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+++ VD L++NFHLP+STLLMLVSA G + Y A+ YRF+S+GD +
Sbjct: 285 YKYKVVDALITNFHLPQSTLLMLVSALAGKDNIMNAYNVAVEKEYRFFSFGDAMFI 340
>gi|326791986|ref|YP_004309807.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Clostridium
lentocellum DSM 5427]
gi|326542750|gb|ADZ84609.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Clostridium
lentocellum DSM 5427]
Length = 340
Score = 487 bits (1253), Expect = e-135, Method: Composition-based stats.
Identities = 153/356 (42%), Positives = 205/356 (57%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F F LP +IA P+ R ++RLMV+ I D+ A+L D +V
Sbjct: 1 MKTSDFYFHLPEEQIAQVPLKDRTTSRLMVLDQKTG---EIEHKHFYDIKAYLKPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G R ++ L R W V +P K K GD + F
Sbjct: 58 LNDTRVIPARLFGARPS-----GGKVEFLLLTRKEEKRWEVLVKPGKKAKIGDEIIF--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L+A V + G+ ++ F GI E + +G +PLPPYI K D Y
Sbjct: 110 -GEGLLKAKVEEIIEDGKRIVRFEYEGI-FEEVLDALGEMPLPPYIHEK----LEDKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL + +G+K+ +VTLHVG GTF PVKVED +H M
Sbjct: 164 QTVYSKHEGSAAAPTAGLHFTKELLKEIEEMGVKIAYVTLHVGLGTFRPVKVEDVLNHEM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ID A +N VK+ GGR+++VGTTS R LE+ E G+I SG+TNIFI PG
Sbjct: 224 HSEYYSIDEENATIINKVKAEGGRVIAVGTTSTRTLESNADEKGLIKAGSGWTNIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+ V+ L++NFHLP+STL+MLVSA G E Y A++ YRF+S+GD L+
Sbjct: 284 YTFKCVEELITNFHLPESTLIMLVSALAGKEAILNAYNTAVNEGYRFFSFGDAMLI 339
>gi|187933823|ref|YP_001885223.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum B str. Eklund 17B]
gi|238691636|sp|B2TMZ3|QUEA_CLOBB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|187721976|gb|ACD23197.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum B str. Eklund 17B]
Length = 341
Score = 487 bits (1253), Expect = e-135, Method: Composition-based stats.
Identities = 151/356 (42%), Positives = 206/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RD++RLMV+ IS D+ +LN D +V
Sbjct: 1 MNVKDFDFYLPEELIAQHPLEKRDTSRLMVLDKETG---EISHKNFYDIIDYLNEGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + +I L RV + W A+P K + G F
Sbjct: 58 LNNTRVMPARLIGEK----EGTGGKIEFLLLKRVEKDRWECLAKPGKSARVGRRFTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L+A V++ + G ++ F GI E + +G +PLPPYI + D Y
Sbjct: 111 -GDGKLKAEVVEVKDNGNRIVEFYYEGI-FEEVLDSLGEMPLPPYIHER----LEDRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT LL ++ GI + +VTLHVG GTF PVKV+ +DH M
Sbjct: 165 QTVYSKENGSAAAPTAGLHFTEELLHKIKDRGINIAYVTLHVGLGTFRPVKVDTIEDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ +N+ K RG +++SVGTTS R LET EDG + +G+TNIFI PG
Sbjct: 225 HSEYYHLSKEDAEVINATKKRGNKVISVGTTSTRTLETIADEDGNVKETNGWTNIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STL+MLVS G E Y+ A+ YRF+S+GD +
Sbjct: 285 YKFKVVDRLITNFHLPESTLIMLVSTLAGKEHVMNAYEEAVKEKYRFFSFGDAMFI 340
>gi|303231808|ref|ZP_07318524.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Veillonella
atypica ACS-049-V-Sch6]
gi|302513515|gb|EFL55541.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Veillonella
atypica ACS-049-V-Sch6]
Length = 341
Score = 487 bits (1253), Expect = e-135, Method: Composition-based stats.
Identities = 157/356 (44%), Positives = 214/356 (60%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD+DLP IA PV PRD++RL+ + + DL L + D +V
Sbjct: 1 MKVTDFDYDLPEELIAQHPVEPRDTSRLLTLDKITGEYTHKAH--FYDLLDELQAGDVLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L G R ++ L N W +P K G ++ F
Sbjct: 59 FNNTKVIPARLYGQR----EGSGGKVEVLLLTPCGENRWECLVKPGKKCPIGQVIVF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
RL+ATV+DK + G ++ F+ G+ + I +G +PLPPYI K D Y
Sbjct: 112 --DDRLKATVLDKTDFGGRIVEFTCDGV-FDDIIQEIGEMPLPPYIHEK----LEDKDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ + G+++ FVTLHVG GTF PV VE +DH M
Sbjct: 165 QTVYAKEKGSAAAPTAGLHFTPELLEKIKAKGVELEFVTLHVGLGTFRPVSVETIEDHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA+ +N KS+G RI++VGTTS+R LE+A+T+DGI++ SG+T IFI PG
Sbjct: 225 HSEFYSVSEDTARRINEAKSKGKRIIAVGTTSIRTLESASTDDGILHATSGWTKIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STLLML+SA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YKFKMVDALVTNFHLPQSTLLMLISALAGREHCLAAYKAAVKERYRFFSFGDAMFI 340
>gi|303230199|ref|ZP_07316967.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Veillonella
atypica ACS-134-V-Col7a]
gi|302515125|gb|EFL57099.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Veillonella
atypica ACS-134-V-Col7a]
Length = 341
Score = 486 bits (1252), Expect = e-135, Method: Composition-based stats.
Identities = 157/356 (44%), Positives = 214/356 (60%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD+DLP IA PV PRD++RL+ + + DL L + D +V
Sbjct: 1 MKVTDFDYDLPEELIAQHPVEPRDTSRLLTLDKITGEYTHKAH--FYDLLDELQAGDVLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L G R ++ L N W +P K G ++ F
Sbjct: 59 FNNTKVIPARLYGQR----EGSGGKVEVLLLTPCGENRWECLVKPGKKCPIGQVIVF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
RL+ATV+DK + G ++ F+ G+ + I +G +PLPPYI K D Y
Sbjct: 112 --DERLKATVLDKTDFGGRIVEFTCDGV-FDDIIQEIGEMPLPPYIHEK----LEDKDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ + G+++ FVTLHVG GTF PV VE +DH M
Sbjct: 165 QTVYAKEKGSAAAPTAGLHFTPELLEKIKAKGVELEFVTLHVGLGTFRPVSVETIEDHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA+ +N KS+G RI++VGTTS+R LE+A+T+DGI++ SG+T IFI PG
Sbjct: 225 HSEFYSVSEDTARRINEAKSKGKRIIAVGTTSIRTLESASTDDGILHATSGWTKIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STLLML+SA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YKFKMVDALVTNFHLPQSTLLMLISALAGREHCLAAYKAAVKERYRFFSFGDAMFI 340
>gi|148381020|ref|YP_001255561.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum A str. ATCC 3502]
gi|153931608|ref|YP_001385391.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum A str. ATCC 19397]
gi|153935623|ref|YP_001388798.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum A str. Hall]
gi|166216714|sp|A7FY18|QUEA_CLOB1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|166216715|sp|A5I6F0|QUEA_CLOBH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|148290504|emb|CAL84632.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum A str. ATCC 3502]
gi|152927652|gb|ABS33152.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum A str. ATCC 19397]
gi|152931537|gb|ABS37036.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum A str. Hall]
Length = 341
Score = 486 bits (1252), Expect = e-135, Method: Composition-based stats.
Identities = 150/356 (42%), Positives = 203/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RD ARL+V+ I + D+ +L ND +V
Sbjct: 1 MKVKDFDFYLPEELIAQHPIEKRDEARLLVLDKETG---EIEHKIFKDILDYLTPNDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + ++ L R + W +P K + G F
Sbjct: 58 LNNTRVLPARLIGAK----EETGGKMEFLLLKRKEKDVWETLVKPGKRAQIGARFIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A VI G ++ F GI E + +G +PLPPYI K D Y
Sbjct: 111 -GNGELKAEVIGMGEEGSRIVKFYYEGI-FEEILDQLGQMPLPPYIKEKLD----DKEMY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL ++ G+K+ F+TLHVG GTF PVKVED +H+M
Sbjct: 165 QTVYSKEEGSAAAPTAGLHFTEELLKKIEEKGVKLAFLTLHVGLGTFRPVKVEDIQEHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D TA+ +N K GGR+++VGTTS R LET +G + SG+T+IFI PG
Sbjct: 225 HSEYYKMDKKTAEIINDTKENGGRVIAVGTTSCRTLETIGAIEGKVGEQSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+++ VD L++NFHLP+STLLMLVSA G + Y A+ YRF+S+GD +
Sbjct: 285 YKYKVVDALITNFHLPQSTLLMLVSALAGRDNIMNAYNVAVEKEYRFFSFGDAMFI 340
>gi|238917266|ref|YP_002930783.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Eubacterium
eligens ATCC 27750]
gi|238872626|gb|ACR72336.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Eubacterium
eligens ATCC 27750]
Length = 343
Score = 486 bits (1252), Expect = e-135, Method: Composition-based stats.
Identities = 150/358 (41%), Positives = 206/358 (57%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F +DLP IA P+ R S+RLMV+ I + D+ +L D +V
Sbjct: 1 MDLHDFYYDLPEELIAQDPLSDRSSSRLMVLDKETG---EIEHKIFRDIVDYLKPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+L G + I L R+ ++W V +P K K G + F
Sbjct: 58 VNDTKVIPARLIGTKA----DTGATIEVLLLKRLEDRQDTWEVLVKPGKKAKVGAKISF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
G+ +L +ID G L+ F+ GI E + +G +PLPPYI K D
Sbjct: 113 ---GEGKLIGEIIDIVEEGNRLIQFTYDGI-FEEILDELGQMPLPPYITHK----LEDKN 164
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YAK +GS AAPTAGLHFT+ LL ++ ++G+ + VTLHVG GTF PVKVE+ DH
Sbjct: 165 RYQTVYAKHEGSAAAPTAGLHFTTELLEKIKAMGVNIARVTLHVGLGTFRPVKVENILDH 224
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE + A +N+ + GGR+++VGTTS R LE+ EDG I SG+T IFI
Sbjct: 225 HMHSEFYVVTQEAADMINNTRKNGGRVIAVGTTSTRTLESVALEDGTIPAKSGWTEIFIY 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+F+A+D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 285 PGYKFKAIDCLITNFHLPESTLVMLVSALAGREHVLHAYEVAVQEKYRFFSFGDAMFI 342
>gi|290769980|gb|ADD61747.1| putative protein [uncultured organism]
Length = 343
Score = 486 bits (1252), Expect = e-135, Method: Composition-based stats.
Identities = 150/358 (41%), Positives = 206/358 (57%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F +DLP IA P+ R S+RLMV+ I + D+ +L D +V
Sbjct: 1 MDLHDFYYDLPEELIAQDPLSDRSSSRLMVLDKETG---EIEHKIFRDIVDYLRPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+L G + I L R+ ++W V +P K K G + F
Sbjct: 58 VNDTKVIPARLIGTKA----DTGATIEVLLLKRLEDRQDTWEVLVKPGKKAKVGAKISF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
G+ +L +ID G L+ F+ GI E + +G +PLPPYI K D
Sbjct: 113 ---GEGKLIGEIIDIVEEGNRLIQFTYDGI-FEEILDELGQMPLPPYITHK----LEDKN 164
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YAK +GS AAPTAGLHFT+ LL ++ ++G+ + VTLHVG GTF PVKVE+ DH
Sbjct: 165 RYQTVYAKHEGSAAAPTAGLHFTTELLEKIKAMGVNIARVTLHVGLGTFRPVKVENILDH 224
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE + A +N+ + GGR+++VGTTS R LE+ EDG I SG+T IFI
Sbjct: 225 HMHSEFYVVTQEAADMINNTRKNGGRVIAVGTTSTRTLESVALEDGTIPAKSGWTEIFIY 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+F+A+D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 285 PGYKFKAIDCLITNFHLPESTLVMLVSALAGREHVLHAYEVAVQEKYRFFSFGDAMFI 342
>gi|253578958|ref|ZP_04856229.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251849901|gb|EES77860.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 341
Score = 486 bits (1252), Expect = e-135, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 200/357 (56%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R S+RLM + I +D+ ++ D +V
Sbjct: 1 MKTSDFYYDLPQELIAQDPLEDRSSSRLMHLSLKDGS---IEHRHFTDVLDYMEEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + I L R + W +P K + G + F
Sbjct: 58 INDTKVIPARLYGHK----EETGALIEILLLKRRENDIWECLVKPGKKARPGAKITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+ +ID + G L+ F GI E + +G +PLPPYI K +D Y
Sbjct: 111 -GNGILKGKIIDVVDEGNRLIQFHYEGI-FEEILDQLGEMPLPPYITHK----LKDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ G+ + VTLHVG GTF PVKV+D + H M
Sbjct: 165 QTVYAKNEGSAAAPTAGLHFTKELLEKVKEKGVNIAHVTLHVGLGTFRPVKVDDVESHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ +N K G R+++VGTTS R LE+AT EDGI+ SG+T IFI PG
Sbjct: 225 HSEFYIVEEDQAKLINDTKKAGKRVIAVGTTSCRTLESATGEDGILKAGSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD +L
Sbjct: 285 YHFKMIDALITNFHLPESTLVMLVSALAGKENIMHAYEVAVQEKYRFFSFGDAMILI 341
>gi|153940081|ref|YP_001392347.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum F str. Langeland]
gi|166216716|sp|A7GHT7|QUEA_CLOBL RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|152935977|gb|ABS41475.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum F str. Langeland]
gi|295320339|gb|ADG00717.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum F str. 230613]
Length = 341
Score = 486 bits (1251), Expect = e-135, Method: Composition-based stats.
Identities = 151/356 (42%), Positives = 203/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RD ARL+V+ I + D+ +L ND +V
Sbjct: 1 MKVKDFDFYLPEELIAQHPMEKRDEARLLVLDKETG---EIEHKIFKDILDYLTPNDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + ++ L R + W +P K + G F
Sbjct: 58 LNNTRVLPARLIGSK----EETGGKMEFLLLKRKEKDVWETLVKPGKRAQIGARFIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G LEA VI G ++ F GI E + +G +PLPPYI K D Y
Sbjct: 111 -GNGELEAEVIGMGEEGSRIVKFYYEGI-FEEILDQLGQMPLPPYIKEKLD----DKEMY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL ++ G+K+ F+TLHVG GTF PVKVED +H+M
Sbjct: 165 QTVYSKEEGSAAAPTAGLHFTEELLKKIEEKGVKLAFLTLHVGLGTFRPVKVEDIQEHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D TA+ +N K GGR+++VGTTS R LET +G + SG+T+IFI PG
Sbjct: 225 HSEYYKMDKKTAEIINDTKENGGRVIAVGTTSCRTLETIGDIEGKVGEQSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+++ VD L++NFHLP+STLLMLVSA G + Y A+ YRF+S+GD +
Sbjct: 285 YKYKVVDALITNFHLPQSTLLMLVSALAGRDNIMNAYNVAVEKEYRFFSFGDAMFI 340
>gi|307692339|ref|ZP_07634576.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Ruminococcaceae bacterium D16]
Length = 341
Score = 486 bits (1251), Expect = e-135, Method: Composition-based stats.
Identities = 150/356 (42%), Positives = 203/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD++RL+ + + + H +LP FL D +V
Sbjct: 1 MKTSDFDFYLPEELIAQTPLERRDASRLLTLDKHTGA---VEHHHFYELPQFLRPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN++VI A+L G R L + W RP + +K G + F
Sbjct: 58 LNNSRVIPARLIGHRP-----TGGVCEVLLLVDKGDKCWECLVRPGRKLKPGAQVIFGDG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ L AT+ + + G+ L+ F GI LE + +G +PLPPYI + +D Y
Sbjct: 113 ---TELTATIEKELDDGKRLVRFHYEGIFLE-ILERLGKMPLPPYIK----AELQDNERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K+ GS AAPTAGLHFT LL ++ +G+KV +VTLHVG GTF PVK ED DH M
Sbjct: 165 QTVYSKVVGSAAAPTAGLHFTPELLEKVQEMGVKVCYVTLHVGLGTFRPVKAEDIQDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I TA +N K GGR++ VGTTS R +E+ EDG + SG+TNIFI PG
Sbjct: 225 HSEYCMISQETADVINETKKNGGRVICVGTTSCRTIESFAAEDGTMTERSGWTNIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YRFKVLDALITNFHLPESTLIMLVSALAGREHVLAAYEEAVRERYRFFSFGDAMFI 340
>gi|322807370|emb|CBZ04944.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
botulinum H04402 065]
Length = 341
Score = 486 bits (1251), Expect = e-135, Method: Composition-based stats.
Identities = 150/356 (42%), Positives = 203/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RD ARL+V+ I + D+ +L ND +V
Sbjct: 1 MKVKDFDFYLPEELIAQHPMEKRDEARLLVLDKETG---EIEHKIFKDILDYLTPNDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + ++ L R + W +P K + G F
Sbjct: 58 LNNTRVLPARLIGSK----EETGGKMEFLLLKRKEKDVWETLVKPGKRAQIGARFIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A VI G ++ F GI E + +G +PLPPYI K D Y
Sbjct: 111 -GNGELKAEVIGMGEEGSRIVKFYYEGI-FEEILDQLGQMPLPPYIKEKLD----DKEMY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL ++ G+K+ F+TLHVG GTF PVKVED +H+M
Sbjct: 165 QTVYSKEEGSAAAPTAGLHFTEELLKKIEEKGVKLAFLTLHVGLGTFRPVKVEDIQEHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D TA+ +N K GGR+++VGTTS R LET +G + SG+T+IFI PG
Sbjct: 225 HSEYYKMDKKTAEIINDTKENGGRVIAVGTTSCRTLETIGDIEGKVGEQSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+++ VD L++NFHLP+STLLMLVSA G + Y A+ YRF+S+GD +
Sbjct: 285 YKYKVVDALITNFHLPQSTLLMLVSALAGRDNIMNAYNVAVEKEYRFFSFGDAMFI 340
>gi|303240766|ref|ZP_07327279.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Acetivibrio
cellulolyticus CD2]
gi|302591654|gb|EFL61389.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Acetivibrio
cellulolyticus CD2]
Length = 341
Score = 485 bits (1249), Expect = e-135, Method: Composition-based stats.
Identities = 149/356 (41%), Positives = 205/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V EF +DLP IA P+ R +RLMVV I + D+ +LN+ D +V
Sbjct: 1 MRVSEFFYDLPEELIAQEPLQDRKQSRLMVVDRKTG---EIEHRIFKDIIEYLNTGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G + +I L + W V +P + K G F
Sbjct: 58 LNDTRVIPARLLGEK----EDTGGKIEFVLLKNTGGDIWEVILKPGRRAKPGSRFVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A +ID G L+ F G+ E+ + VG +PLPPYI +K D Y
Sbjct: 111 -GNGELKAEIIDVVEEGNRLVRFEYEGV-FEQILDRVGIMPLPPYITKK----LEDKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT+ LL ++ GI++ +VTLHVG GTF PVKVE+ +H M
Sbjct: 165 QTVYSKHKGSAAAPTAGLHFTTELLEKIKEKGIEIAYVTLHVGLGTFRPVKVENILEHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + +N+ + GG+I++VGTTS R++ET E G + P SG+T+IFI PG
Sbjct: 225 HSEYYNLKEEDCNKINNTRKNGGKIIAVGTTSCRVIETIGDEFGALKPQSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+ VD L++NFHLP+STLLMLVSA G + K Y A++ YRF+S+GD +
Sbjct: 285 YNFKVVDKLITNFHLPESTLLMLVSALAGRDTIMKAYNEAVNEKYRFFSFGDAMFI 340
>gi|229824967|ref|ZP_04451036.1| hypothetical protein GCWU000182_00316 [Abiotrophia defectiva ATCC
49176]
gi|229790970|gb|EEP27084.1| hypothetical protein GCWU000182_00316 [Abiotrophia defectiva ATCC
49176]
Length = 341
Score = 485 bits (1248), Expect = e-135, Method: Composition-based stats.
Identities = 141/357 (39%), Positives = 207/357 (57%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F ++LP IA P+ R ++RL+V+ + + SD+ +LN D +V
Sbjct: 1 MKTSDFFYELPEELIAQDPLEDRTASRLLVLDRKTDK---LEHKIFSDVIDYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G + ++ L R + W +P K ++ G + F
Sbjct: 58 INNTRVIPARLIGEK----EGTGGKVEILLLKRRENDIWESLVKPGKKLRPGARVTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A +++ G L+ F GI E + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLKAEILEIAEEGNRLVKFYYEGI-FEEILDSLGEMPLPPYITHK----LEDKEMY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT+ LL ++ G+++ +TLHVG GTF PVKVED ++H M
Sbjct: 165 QTVYAKFDGSAAAPTAGLHFTNELLEKIRHKGVRIASITLHVGLGTFRPVKVEDVNNHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E ++ A +N K GGR++ VGTTS R +E+ E+G+++ +G T+IFI PG
Sbjct: 225 HTEWYEVNKEAADIINETKKNGGRVICVGTTSCRTIESVADENGLMSAKTGETDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ +D L++NFHLP+STL+MLVSAF G E Y+ A+ YRF+S+GD +L
Sbjct: 285 YKFKVMDGLITNFHLPESTLVMLVSAFAGKERVLSAYETAVKEIYRFFSFGDAMILI 341
>gi|197303122|ref|ZP_03168167.1| hypothetical protein RUMLAC_01846 [Ruminococcus lactaris ATCC
29176]
gi|197297777|gb|EDY32332.1| hypothetical protein RUMLAC_01846 [Ruminococcus lactaris ATCC
29176]
Length = 342
Score = 484 bits (1247), Expect = e-135, Method: Composition-based stats.
Identities = 141/356 (39%), Positives = 196/356 (55%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R S+RL+V+ H+ ++ +LN D +V
Sbjct: 1 MKTSDFYYDLPEELIAQDPLEDRSSSRLLVLDKKTGKT---EHHVFREITDYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L GV+ +I L R + + W +P K + G + F
Sbjct: 58 LNDTKVIPARLIGVK----EETGAKIEVLLLKRGADDVWETLVKPGKKARPGARISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L V++ G L+ F GI E + +G +PLPPYI + +D Y
Sbjct: 111 -GDGLLVGEVMEVVEEGNRLIHFEYDGI-FEEILDQLGQMPLPPYITHQ----LQDKDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
T YA GS AAPTAGLHFT LL + G+ + VTLHVG GTF PVKV+D ++H M
Sbjct: 165 NTVYAAHSGSAAAPTAGLHFTPELLKEIEEKGVDIARVTLHVGLGTFRPVKVDDVENHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ID A +N K G +++ VGTTS R +E+A E+G + SG+T IFI PG
Sbjct: 225 HSEFYMIDEEAADKINRAKENGHKVICVGTTSCRTIESAADENGKLKACSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YQFKVLDELITNFHLPESTLVMLVSALAGREHVLAAYEEAVKERYRFFSFGDAMFI 340
>gi|187778350|ref|ZP_02994823.1| hypothetical protein CLOSPO_01942 [Clostridium sporogenes ATCC
15579]
gi|187771975|gb|EDU35777.1| hypothetical protein CLOSPO_01942 [Clostridium sporogenes ATCC
15579]
Length = 341
Score = 484 bits (1246), Expect = e-134, Method: Composition-based stats.
Identities = 151/356 (42%), Positives = 206/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FDF LP IA P+ RD ARL+V+ I D + D+ +L ND +V
Sbjct: 1 MKVKDFDFYLPEELIAQHPMEKRDEARLLVLDKKTG---EIEDKIFKDILDYLTPNDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + ++ L R + W +P K + G F
Sbjct: 58 LNNTRVLPARLIGSK----EETGGKMEFLLLKRKEKDVWETLVKPGKRAQIGARFIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A VI G ++ F GI E + +G +PLPPYI K D Y
Sbjct: 111 -GNGELKAEVIGMGEEGSRIVKFYYEGI-FEEILDQLGQMPLPPYIKEKLD----DKEMY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL ++ G+K+ F+TLHVG GTF PVKVED +HIM
Sbjct: 165 QTVYSKEEGSAAAPTAGLHFTEELLEKIKGKGVKLAFLTLHVGLGTFRPVKVEDIQEHIM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D TA+ +N+ + +GGR+++VGTTS R LET +G + SG+T+IFI PG
Sbjct: 225 HSEYYKMDKKTAKIINTTREKGGRVIAVGTTSCRTLETIGDIEGKVKEQSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+++ VD L++NFHLP+STLLMLVSA G + Y A+ YRF+S+GD +
Sbjct: 285 YKYKVVDALITNFHLPQSTLLMLVSALAGRDNIMNAYNMAVEKEYRFFSFGDAMFI 340
>gi|302670448|ref|YP_003830408.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Butyrivibrio proteoclasticus B316]
gi|302394921|gb|ADL33826.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Butyrivibrio proteoclasticus B316]
Length = 349
Score = 483 bits (1245), Expect = e-134, Method: Composition-based stats.
Identities = 144/353 (40%), Positives = 201/353 (56%), Gaps = 16/353 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ FDLP IA P+ RD +L+V+ + H+ +++ +L D +V N
Sbjct: 11 TADYYFDLPQELIAQDPMEKRDECKLLVMDKETGN---VEHHVFNEVINYLQPGDCLVLN 67
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NTKVI A+L GV+ + L R + W +P K ++ G + F G
Sbjct: 68 NTKVIPARLLGVK----EETGAAVEILLLKRKEADVWETLVKPGKKLRPGAKVSF----G 119
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
L+A ++D + G L+ F GI E + +G +PLPPYI K +D YQT
Sbjct: 120 DGILKAEIMDIVDEGNRLVKFYYDGI-WEEVLDRLGEMPLPPYITHK----LQDKNMYQT 174
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YAK +GS AAPTAGLHFT LL ++ G+ + FVTLHVG GTF PVKV + +H MH+
Sbjct: 175 VYAKYEGSAAAPTAGLHFTDELLDKIREKGVDIAFVTLHVGLGTFRPVKVTNVKEHHMHT 234
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E + A +N K G R++ VGTTS R +E+A EDG ++ SG T+IFI PGY+
Sbjct: 235 EWYQVTQEAADKINKAKESGHRVICVGTTSCRTIESAAGEDGTLSAASGDTSIFIYPGYK 294
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
F+ +D L++NFHLP+STL+MLVSAF G E Y+ AI YRF+S+GD L
Sbjct: 295 FKLMDGLITNFHLPESTLVMLVSAFAGREHVLNAYETAIKEKYRFFSFGDACL 347
>gi|150390105|ref|YP_001320154.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Alkaliphilus metalliredigens QYMF]
gi|167016401|sp|A6TQM7|QUEA_ALKMQ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|149949967|gb|ABR48495.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Alkaliphilus metalliredigens QYMF]
Length = 341
Score = 483 bits (1245), Expect = e-134, Method: Composition-based stats.
Identities = 154/356 (43%), Positives = 208/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M EFDFDLP IA P+ RD +RLMV+ N I D+ +LN D +V
Sbjct: 1 MKTNEFDFDLPDRLIAQTPLEKRDHSRLMVLDKNKQ---EIVHKHFYDITDYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L GV+ ++ L R+ N+W V +P K K G F
Sbjct: 58 INNTRVLPARLFGVK----ENTGGKMEFLLLKRIDLNTWEVLVKPGKKAKIGSRFEF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L+A V+ + G ++ F G+ E + +G +PLPPYI + D Y
Sbjct: 111 -GEGILKAEVLSMADEGARIVRFEYEGV-FEELLDQLGKMPLPPYITE----ELADRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LLS + GI V +TLHVG GTF PVKV+ ++H M
Sbjct: 165 QTVYSKHEGSSAAPTAGLHFTPELLSEIKKKGINVVSITLHVGLGTFRPVKVDSLENHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E I AQ +N K G R+ +VGTTS R LE+A+TE G I G+TNIFI PG
Sbjct: 225 HAEYYEITEEAAQVINDTKKAGNRVFAVGTTSCRTLESASTEKGKIEANKGWTNIFIFPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA G E+T + Y+ A+ YRF+S+GD L+
Sbjct: 285 YQFKILDGLITNFHLPESTLIMLVSALLGKEKTLQAYKVAVDEQYRFFSFGDAMLI 340
>gi|294501379|ref|YP_003565079.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
megaterium QM B1551]
gi|295706726|ref|YP_003599801.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
megaterium DSM 319]
gi|294351316|gb|ADE71645.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
megaterium QM B1551]
gi|294804385|gb|ADF41451.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
megaterium DSM 319]
Length = 342
Score = 483 bits (1245), Expect = e-134, Method: Composition-based stats.
Identities = 152/358 (42%), Positives = 211/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF LP IA P+ RD++RLMV++ + H+ DL ++ D +V
Sbjct: 1 MKVDLFDFHLPEELIAQTPLEQRDASRLMVLNKETGS---VKHHMFHDLLDYVQEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + I L + ++W +P+K +K+G ++ F
Sbjct: 58 LNDTRVLPARLFGTK----EDTGANIEVLLLKQTQGDTWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A + + G LL F+ GI + +G +PLPPYI + D Y
Sbjct: 111 -GDGRLTAVCKETSDQGGRLLEFNYEGI-FYEVLEQLGEMPLPPYIKERLD----DQERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ QGS AAPTAGLHFT +L +L G+ + F+TLHVG GTF PV V+D ++H M
Sbjct: 165 QTVFAREQGSAAAPTAGLHFTEEMLEQLKEKGVHIAFLTLHVGLGTFRPVSVDDLEEHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + TA LNSV+ +GGRI+SVGTTS R LET TE +G SG+TNIFI P
Sbjct: 225 HSEFYQVSEGTAALLNSVREKGGRIISVGTTSTRTLETIATEHNGKFVASSGWTNIFIFP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY F+A+D +++NFHLPKSTL+MLVSA G E Y+ A++ YRF+S+GD L+
Sbjct: 285 GYEFKAIDGMITNFHLPKSTLIMLVSALAGRENVISAYEQAVAEKYRFFSFGDAMLIL 342
>gi|315650365|ref|ZP_07903437.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Eubacterium
saburreum DSM 3986]
gi|315487476|gb|EFU77786.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Eubacterium
saburreum DSM 3986]
Length = 345
Score = 483 bits (1244), Expect = e-134, Method: Composition-based stats.
Identities = 146/356 (41%), Positives = 201/356 (56%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+F +DLP IA P+ R S+RL+V+ + I+ D+ +L+ D +V
Sbjct: 5 MDVKDFRYDLPQELIAQDPLEDRSSSRLLVLDKDTG---EITHKHFYDIIDYLDEGDCLV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKVI A+L GV+ + L R S W +P K + G ++ F
Sbjct: 62 LNETKVIPARLMGVK----KDTGAVVEILLLKRKSKTVWECLVKPGKKCRVGAVIEF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L TV D G ++ F GI E + +GT+PLPPYI +D Y
Sbjct: 115 -GEGLLTGTVSDIVEEGNRIIEFEFDGI-FEEILDKLGTMPLPPYITH----TLKDRNRY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + G+K+ VTLHVG GTF PVKV D H M
Sbjct: 169 QTVYAKNDGSAAAPTAGLHFTKELLKDIEDKGVKLAKVTLHVGLGTFRPVKVSDVRQHHM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +NS ++ G R++ VGTTS R +E+A+ + G + SG+T+IFI PG
Sbjct: 229 HSEFFQVSKEAADIINSTRANGKRVICVGTTSTRTVESASDDKGYLKETSGWTDIFIYPG 288
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA G E+ Y+ A+ YRF+S+GD +
Sbjct: 289 YKFKVLDALITNFHLPESTLVMLVSALAGREKVLHAYEEAVKEKYRFFSFGDAMFI 344
>gi|295399351|ref|ZP_06809333.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Geobacillus
thermoglucosidasius C56-YS93]
gi|294978817|gb|EFG54413.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Geobacillus
thermoglucosidasius C56-YS93]
Length = 342
Score = 483 bits (1243), Expect = e-134, Method: Composition-based stats.
Identities = 152/358 (42%), Positives = 205/358 (57%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDFDLP IA P+ RD++RLMV+ I ++ ++L D +V
Sbjct: 1 MKIDLFDFDLPEELIAQTPLPNRDASRLMVLDKKTG---EIHHETFRNILSYLREGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + I L ++ + W +P+K +K G + F
Sbjct: 58 LNDTRVMPARLYGEK----ENTGAHIEVLLLKQLEGDRWETLVKPAKRVKAGTKIIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+AT +D G +L FS GI + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLQATCVDTLEHGGRVLQFSYRGI-FYEVLEQLGEMPLPPYIKEKLA----DPERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GS AAPTAGLHFT LL + + G+ + F+TLHVG GTF PV VE+ ++H M
Sbjct: 165 QTVYAREIGSAAAPTAGLHFTEQLLDDIRAKGVHIAFITLHVGLGTFRPVNVENIEEHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TAQ LN K +GGRI++VGTTS R LET A DG SG+T+IFI P
Sbjct: 225 HAEFYQMTEATAQLLNETKRQGGRIIAVGTTSTRTLETIAARHDGTFVAESGWTDIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY F+A+D L++NFHLPKSTL+MLVSA G E Y A+ YRF+S+GD L+
Sbjct: 285 GYEFKAIDGLVTNFHLPKSTLIMLVSALAGRENILHAYNVAVKERYRFFSFGDAMLII 342
>gi|20807638|ref|NP_622809.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Thermoanaerobacter tengcongensis MB4]
gi|22096013|sp|Q8RAN0|QUEA_THETN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|20516181|gb|AAM24413.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Thermoanaerobacter tengcongensis MB4]
Length = 341
Score = 482 bits (1242), Expect = e-134, Method: Composition-based stats.
Identities = 152/357 (42%), Positives = 208/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M EF FDLP IA P+ R S+RLM++ I + ++ +L D +V
Sbjct: 1 MKRSEFYFDLPEELIAQEPLEDRASSRLMILDRRTG---EIKHDIFKNITKYLKEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G R ++ L R S N W V +P K K G + F
Sbjct: 58 LNDTKVIPARLIGQR----EDSGGKVELLLLRRTSMNEWEVLVKPGKRAKVGKRVVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L A +ID G + F G+ E + +G +P+PPYI +K +D Y
Sbjct: 111 -GNGELVAEIIDTTEAGGRIARFYYDGV-FEEVLDRLGEMPVPPYIKKK----LKDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL + ++G+K F+TLHVG GTF PVK E ++H M
Sbjct: 165 QTVYAKYEGSAAAPTAGLHFTEELLDEIRNMGVKTVFITLHVGLGTFRPVKEEIIENHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A+A+N + GGRI++VGTTS R LET E G I+P SG+T+IFI PG
Sbjct: 225 HEEFYIVTEEAAKAINEARKNGGRIIAVGTTSTRTLETVADESGYIHPKSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+A+D +++NFHLP+STL+M+VSAF G E + Y+ AI + YRF+S+GD L+
Sbjct: 285 YKFKAIDGMITNFHLPESTLIMMVSAFAGKENIMRAYKVAIENKYRFFSFGDAMLII 341
>gi|239827856|ref|YP_002950480.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Geobacillus
sp. WCH70]
gi|259551452|sp|C5D5E6|QUEA_GEOSW RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|239808149|gb|ACS25214.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Geobacillus
sp. WCH70]
Length = 342
Score = 482 bits (1241), Expect = e-134, Method: Composition-based stats.
Identities = 150/358 (41%), Positives = 209/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDFDLP IA P+ RD++RLMV+ I ++ ++L+ D +V
Sbjct: 1 MKIDLFDFDLPEELIAQTPLPNRDASRLMVLDKKTG---EIRHETFRNILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + I L ++ + W +P+K +K G + F
Sbjct: 58 LNDTRVMPARLYGEK----ENTGANIEVLLLKQLEGDRWETLVKPAKRVKVGTEITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+AT +D G +L FS GI + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLKATCVDTLEHGGRILEFSYQGI-FYEVLEQLGEMPLPPYIKEKLD----DPERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GS AAPTAGLHFT LL + + G+ + F+TLHVG GTF PV VE+ ++H M
Sbjct: 165 QTVYAREVGSAAAPTAGLHFTEQLLDDIRAKGVHIAFITLHVGLGTFRPVSVENIEEHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA+ LN V+ +GGRI++VGTTS R LET A+ +G SG+T+IFI P
Sbjct: 225 HAEFYQMTEETARLLNEVRQQGGRIIAVGTTSTRTLETIASKHNGAFVAESGWTDIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY F+A+D L++NFHLPKSTL+MLVSA G E + Y A+ YRF+S+GD L+
Sbjct: 285 GYEFKAIDGLVTNFHLPKSTLIMLVSALAGRENILRAYNAAVKERYRFFSFGDAMLII 342
>gi|315122778|ref|YP_004063267.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Liberibacter solanacearum CLso-ZC1]
gi|313496180|gb|ADR52779.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Liberibacter solanacearum CLso-ZC1]
Length = 359
Score = 482 bits (1241), Expect = e-134, Method: Composition-based stats.
Identities = 285/359 (79%), Positives = 321/359 (89%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
MMVKEFDF LP SRIALRPV PRDSARLMVV+PNLSC +ISD+ V DLP FLNSNDAIV
Sbjct: 1 MMVKEFDFHLPSSRIALRPVSPRDSARLMVVYPNLSCSQMISDYSVRDLPIFLNSNDAIV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI AQL G R N E ISCTLHMR+S NSWS Y RP K+I++GD ++FFSQ
Sbjct: 61 FNNTKVIAAQLRGRRLRRTNDSEHWISCTLHMRISSNSWSAYVRPGKIIRQGDTIYFFSQ 120
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DGQS+LEA VI+K +TGEILLVF +SG EL+RQI+L+GT+PLPPYIA+KRPID RDYVDY
Sbjct: 121 DGQSKLEANVIEKRDTGEILLVFPLSGTELDRQIALIGTMPLPPYIAKKRPIDERDYVDY 180
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QTTYA IQGSVAAPTAGLHFTS+LLS+L+S+G+ VYF+TLHVGAGTFMPV+VEDTDDHIM
Sbjct: 181 QTTYASIQGSVAAPTAGLHFTSDLLSKLVSMGVAVYFITLHVGAGTFMPVRVEDTDDHIM 240
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSEIGFIDA TAQ LN+VK RGGRIV+VGTTSLRLLETATTEDGII P SG+TNIFITPG
Sbjct: 241 HSEIGFIDAQTAQDLNAVKLRGGRIVAVGTTSLRLLETATTEDGIIMPLSGYTNIFITPG 300
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRFRAVD+L+SNFHLPKSTLLMLVSAFCG+EETK MYQHAI+++YRFYSYGD SL+F+K
Sbjct: 301 YRFRAVDVLLSNFHLPKSTLLMLVSAFCGVEETKTMYQHAIANSYRFYSYGDASLIFKK 359
>gi|225569103|ref|ZP_03778128.1| hypothetical protein CLOHYLEM_05183 [Clostridium hylemonae DSM
15053]
gi|225161902|gb|EEG74521.1| hypothetical protein CLOHYLEM_05183 [Clostridium hylemonae DSM
15053]
Length = 341
Score = 482 bits (1241), Expect = e-134, Method: Composition-based stats.
Identities = 147/356 (41%), Positives = 199/356 (55%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F ++LP IA P+ R S+RL+V+ ++S H+ D+ +L+ D +V
Sbjct: 1 MKRQDFYYELPEELIAQDPLEDRSSSRLLVLDKESG---LVSHHVFKDITDYLHRGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G R + I L R + W +P K K G + F
Sbjct: 58 INDTKVIPARLVGSRI----GTDARIEVLLLKRKENDIWETLVKPGKKAKIGTKISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L VID G L+ FS GI E + +G +PLPPYI + D Y
Sbjct: 111 -GEGILTGEVIDVVEEGNRLIQFSYEGI-FEEILDRLGQMPLPPYITHQ----LEDKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + G+ + VTLHVG GTF PVK +D +H M
Sbjct: 165 QTVYAKHSGSAAAPTAGLHFTPELLEEIQKKGVDIARVTLHVGLGTFRPVKADDILEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ID A +N K GG+++ VGTTS R +E+A + G I SG+T+IFI PG
Sbjct: 225 HSEFFQIDEAAAMKINKAKDTGGKVICVGTTSCRTIESAADKTGHITAKSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YEFKLLDGLITNFHLPESTLIMLVSALAGREHVLAAYEEAVKERYRFFSFGDAMYI 340
>gi|312110089|ref|YP_003988405.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Geobacillus
sp. Y4.1MC1]
gi|311215190|gb|ADP73794.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Geobacillus
sp. Y4.1MC1]
Length = 342
Score = 482 bits (1240), Expect = e-134, Method: Composition-based stats.
Identities = 152/358 (42%), Positives = 205/358 (57%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDFDLP IA P+ RD++RLMV+ I ++ ++L D +V
Sbjct: 1 MKIDLFDFDLPEELIAQTPLPNRDASRLMVLDKKTG---EIRHETFRNILSYLREGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + I L ++ + W +P+K +K G + F
Sbjct: 58 LNDTRVMPARLYGEK----ENTGAHIEVLLLKQLEGDRWETLVKPAKRVKAGTKIIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+AT +D G +L FS GI + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLQATCVDTLEHGGRVLQFSYRGI-FYEVLEQLGEMPLPPYIKEKLA----DPERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GS AAPTAGLHFT LL + + G+ + F+TLHVG GTF PV VE+ ++H M
Sbjct: 165 QTVYAREIGSAAAPTAGLHFTEQLLDDIRAKGVHIAFITLHVGLGTFRPVNVENIEEHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TAQ LN K +GGRI++VGTTS R LET A DG SG+T+IFI P
Sbjct: 225 HAEFYQMTEATAQLLNETKRQGGRIIAVGTTSTRTLETIAARHDGTFVAESGWTDIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY F+A+D L++NFHLPKSTL+MLVSA G E Y A+ YRF+S+GD L+
Sbjct: 285 GYEFKAIDGLVTNFHLPKSTLIMLVSALAGRENILHAYNVAVKERYRFFSFGDAMLII 342
>gi|307266566|ref|ZP_07548098.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter wiegelii Rt8.B1]
gi|306918420|gb|EFN48662.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter wiegelii Rt8.B1]
Length = 341
Score = 481 bits (1239), Expect = e-134, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 210/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M EF F+LP IA P+ R S+RLMV++ + + ++ +L + D +V
Sbjct: 1 MKRSEFYFELPEELIAQEPLEDRSSSRLMVLNRKTG---EVQHDIFKNITKYLKAGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G R +I L R+S N W +P + K G + F
Sbjct: 58 LNDTKVIPARLIGRR----QDSGGKIEFVLLKRLSVNEWETLVKPGRRAKVGTRVVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L A ++D G ++ F G+ E + +G +P+PPYI +K +D Y
Sbjct: 111 -GNGELVAEILDNTEVGGRVVRFYYEGV-FEEVLDKLGEMPVPPYIKKK----LKDKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ +G+K F+TLHVG GTF PVK E ++H M
Sbjct: 165 QTVYAKYEGSAAAPTAGLHFTEELLEKIRQMGVKTVFITLHVGLGTFRPVKEEIIENHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A+ +N+ + +GGR+++VGTTS R LET E+G I SG+T+IFI PG
Sbjct: 225 HEEFYIVTKEAAEEINATREKGGRVIAVGTTSTRTLETVADENGYIREKSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+A+D +++NFHLP+STL+M+VSAF G E + YQ AI YRF+S+GD L+
Sbjct: 285 YKFKAIDGMITNFHLPESTLIMMVSAFAGKENIMRAYQVAIEERYRFFSFGDAMLII 341
>gi|154498091|ref|ZP_02036469.1| hypothetical protein BACCAP_02072 [Bacteroides capillosus ATCC
29799]
gi|150273081|gb|EDN00238.1| hypothetical protein BACCAP_02072 [Bacteroides capillosus ATCC
29799]
Length = 343
Score = 481 bits (1239), Expect = e-134, Method: Composition-based stats.
Identities = 144/356 (40%), Positives = 203/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +F +DLP IA P+ RD +RLMV++ S H +LP FL D +V
Sbjct: 3 LKTSDFYYDLPQELIAQTPLDRRDGSRLMVLNKETGET---SHHHFYELPNFLRPGDCLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+++V+ A+L G R + L + W RP + +K G L F
Sbjct: 60 LNDSRVLPARLLGHR----EPTGGAVEVLLLIDRGNKVWECLVRPGRKVKPGTKLSF--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L A V+++ G L+ F GI LE + +G +PLPPYI + D Y
Sbjct: 113 -GDGLLTADVLEEVEGGNRLIEFHYEGIFLE-ILERLGKMPLPPYIKE----ELNDPERY 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ GS AAPTAGLHFT LL+++ ++G+++ +VTLHVG GTF PVK E+ DH M
Sbjct: 167 QTVYSREVGSAAAPTAGLHFTKELLAQIEAMGVRLAYVTLHVGLGTFRPVKEENITDHEM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E I TA +N K+ GGR++ VGTTS R +E+ EDG + +G+T+I+I PG
Sbjct: 227 HAEYCMISQKTADIINETKANGGRVICVGTTSCRTIESWAAEDGTLKESAGWTSIYIYPG 286
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF+A+D L++NFHLP+STL+MLVSA G E Y A YRF+S+GD +
Sbjct: 287 YRFKALDCLITNFHLPESTLVMLVSALAGRENILNAYAEAAREKYRFFSFGDAMFI 342
>gi|326390116|ref|ZP_08211677.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter ethanolicus JW 200]
gi|325993764|gb|EGD52195.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter ethanolicus JW 200]
Length = 341
Score = 480 bits (1237), Expect = e-133, Method: Composition-based stats.
Identities = 146/357 (40%), Positives = 210/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M EF F+LP IA P+ R S+RLMV++ + + ++ +L + D +V
Sbjct: 1 MKRSEFYFELPEELIAQEPLEDRSSSRLMVLNRKTG---EVQHDIFKNITKYLKAGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G R +I L R+S N W +P + K G + F
Sbjct: 58 LNDTKVIPARLIGRR----QDSGGKIEFVLLKRLSVNEWETLVKPGRRAKVGTRVVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L A ++D G ++ F G+ E + +G +P+PPYI +K +D Y
Sbjct: 111 -GNGELVAEILDNTEVGGRVVRFYYEGL-FEEVLDKLGEMPVPPYIKKK----LKDKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ +G+K F+TLHVG GTF PVK E ++H M
Sbjct: 165 QTVYAKYEGSAAAPTAGLHFTEELLEKIRQMGVKTVFITLHVGLGTFRPVKEEIIENHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A+ +N+ + +GGR+++VGTTS R LET E+G I SG+T+IFI PG
Sbjct: 225 HEEFYIVTKEAAEEINATREKGGRVIAVGTTSTRTLETVADENGYIREKSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+A+D +++NFHLP+STL+M+VSAF G E + Y+ AI YRF+S+GD L+
Sbjct: 285 YKFKAIDGMITNFHLPESTLIMMVSAFAGKENIMRAYKIAIEERYRFFSFGDAMLII 341
>gi|312623361|ref|YP_004024974.1| s-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor kronotskyensis 2002]
gi|312203828|gb|ADQ47155.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor kronotskyensis 2002]
Length = 346
Score = 480 bits (1237), Expect = e-133, Method: Composition-based stats.
Identities = 152/359 (42%), Positives = 208/359 (57%), Gaps = 18/359 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +F +DLP IA +PV PRDS+RLMV+ P+ I + D+ +LN D +V
Sbjct: 5 KLSDFHYDLPDELIAQKPVEPRDSSRLMVILPD----GRIEHRIFRDIVDYLNEGDCLVL 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NN+KVI A+L G R I L R+ N+W V RP K +KG F
Sbjct: 61 NNSKVIPARLIGQR----EDTGSFIEFLLVKRLDINTWEVMTRPGKKARKGRRFVF---- 112
Query: 122 GQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A V+ G ++ F G+ E + +G IPLPPYI + D Y
Sbjct: 113 GNGELKAEVLHVNREEGTRIVRFYYDGV-FEEVLERLGKIPLPPYIKE----ELDDLSRY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K+ GS AAPTAGLHFT LLSR+ G+++ +VTLHVG GTF PVKVE+ ++H M
Sbjct: 168 QTVYSKVPGSAAAPTAGLHFTEELLSRISKKGVEILYVTLHVGLGTFKPVKVENVEEHKM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I A +N K G RI++VGTTS R+LE+ E+G + G+T+IFI PG
Sbjct: 228 HEEYYEISQDVADKINKAKELGKRIIAVGTTSCRVLESCCDENGKVKAKKGWTDIFIYPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
Y F+ +D L++NFHLP +TL+MLV AF G E Y+ A+ YRF+S+GD L+ ++
Sbjct: 288 YEFKVLDGLVTNFHLPDTTLMMLVCAFGGYERIMNAYKIAVDMRYRFFSFGDAMLILRR 346
>gi|323706517|ref|ZP_08118076.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacterium xylanolyticum LX-11]
gi|323534147|gb|EGB23939.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacterium xylanolyticum LX-11]
Length = 341
Score = 480 bits (1237), Expect = e-133, Method: Composition-based stats.
Identities = 151/357 (42%), Positives = 217/357 (60%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EF +DLP IA P+ RD +RLMV++ + I + ++ +L ND +V
Sbjct: 1 MNLHEFYYDLPEELIAQEPLQNRDESRLMVLNKDTG---EIKHDIFKNILTYLKPNDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L GVR +I L R+ + W + +P + K G F
Sbjct: 58 LNDTKVIPARLYGVR----EDTGGKIEFVLLKRLGIDEWEILVKPGRRAKIGSKFIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A ++ + G ++ FS G+ E + +G +P+PPYI +K +D Y
Sbjct: 111 -GNGELKALILSDTDAGGRIVRFSYEGV-FEEVLDKLGEMPIPPYIKKK----LKDKNMY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT+ LL ++ G+K F+TLHVG GTF PVK E ++H M
Sbjct: 165 QTVYAKHEGSAAAPTAGLHFTNELLDKIREFGVKTVFITLHVGLGTFRPVKEEVIENHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A A+N+ + GGRI+SVGTTS R LET +DGII+ SG+T+IFI PG
Sbjct: 225 HSEFYIVNEDAADAINAARKAGGRIISVGTTSTRTLETVADDDGIIHAGSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+++A+D +++NFHLP+STL+M++SAF G E Y+ AI + YRFYS+GD L+
Sbjct: 285 YKYKAIDGIITNFHLPESTLIMMISAFAGKENVMNAYKTAIENKYRFYSFGDAMLII 341
>gi|310643556|ref|YP_003948314.1| s-adenosylmethionine:tRNA ribosyltransferase-isomerase, (queuosine
biosynthesis protein) [Paenibacillus polymyxa SC2]
gi|309248506|gb|ADO58073.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase, (Queuosine
biosynthesis protein) [Paenibacillus polymyxa SC2]
Length = 342
Score = 480 bits (1236), Expect = e-133, Method: Composition-based stats.
Identities = 146/359 (40%), Positives = 213/359 (59%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V ++DF+LP + IA P+ R ++RL+ ++ N + H SD+ +L D +V
Sbjct: 1 MNVNDYDFELPETLIAQTPLLERTASRLLTLNKNNG---EVGHHTFSDIVQYLQPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G++ + L ++ + W +P K +KKG ++ F +
Sbjct: 58 LNDTRVIPARLFGIK----QDTGAKAEVLLLKQLEGDRWEALVKPGKKLKKGAVIVFGDE 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L+A + ++ + G +L FS GI + + +G +PLPPYI + D Y
Sbjct: 114 -----LKAVIEEEGDMGGRVLSFSYDGI-FQEILDRLGQMPLPPYIKEQLD----DRERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +GS AAPTAGLHFT LL R+ G+ V F+TLHVG GTF P+ V+ ++H+M
Sbjct: 164 QTVYARHEGSAAAPTAGLHFTEELLDRIKEKGVTVAFITLHVGLGTFRPMSVDTIEEHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE--DGIINPWSGFTNIFIT 298
H E + TA LN+ K+RGGR+V+VGTTS R LET + DG++ SG+T IFI
Sbjct: 224 HEEYYSLSQETADVLNATKARGGRVVAVGTTSCRTLETVGSNFVDGVLQASSGWTQIFIY 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY FR VD +++NFHLPKSTL+MLVSA G + YQ AI YRF+S+GD ++
Sbjct: 284 PGYEFRVVDAMITNFHLPKSTLVMLVSALAGRKNIMHAYQEAIDQKYRFFSFGDAMFIY 342
>gi|304317012|ref|YP_003852157.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacterium thermosaccharolyticum DSM 571]
gi|302778514|gb|ADL69073.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacterium thermosaccharolyticum DSM 571]
Length = 341
Score = 480 bits (1236), Expect = e-133, Method: Composition-based stats.
Identities = 157/357 (43%), Positives = 216/357 (60%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EF +DLP IA P+ RD +RLM+++ I + ++ ++LN ND +V
Sbjct: 1 MNLHEFYYDLPEELIAQEPLKNRDESRLMILNRLTG---EIKHDIFKNIISYLNPNDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L GVR +I L R+S + W + +P + K G F
Sbjct: 58 LNDTKVIPARLIGVR----EDTGGKIEFVLLKRLSSDEWEILVKPGRRAKIGSKFIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A VI + G ++ FS GI E + +G +P+PPYI +K D Y
Sbjct: 111 -GNGELKAEVISNTDVGGRIVRFSYEGI-FEEVLDKLGEMPVPPYIKKK----LEDKNMY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT+ LL + G+K FVTLHVG GTF PVK E + H M
Sbjct: 165 QTVYAKHEGSAAAPTAGLHFTNKLLDDIRKYGVKTVFVTLHVGLGTFRPVKEEVIEKHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + AQA+N+ + GGRI+SVGTTS R LET E+GII+ SG+T+IFI PG
Sbjct: 225 HSEFYTVTEEAAQAINTARESGGRIISVGTTSTRTLETVADENGIIHAGSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+++A+D +++NFHLP+STL+M++SAF G E Y+ AI + YRFYS+GD L+
Sbjct: 285 YKYKAIDGIITNFHLPESTLIMMISAFAGKENVMNAYKTAIDNKYRFYSFGDAMLII 341
>gi|302389934|ref|YP_003825755.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Thermosediminibacter oceani DSM 16646]
gi|302200562|gb|ADL08132.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Thermosediminibacter oceani DSM 16646]
Length = 341
Score = 480 bits (1236), Expect = e-133, Method: Composition-based stats.
Identities = 144/357 (40%), Positives = 213/357 (59%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+F ++LP IA P+ RD++RLMVV + + + ++ +L D +V
Sbjct: 1 MDVKDFYYELPEELIAQEPLEKRDTSRLMVVKRDTR---IFEHRIFENITEYLEEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L GV+ +I L R+ N+W V +P + + G + F
Sbjct: 58 LNDTRVMPARLLGVK----EDTGGKIEFVLLKRIKENTWEVLVKPGRRARIGSVFVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V+D + G ++ F GI E+ + +G +P+PPYI + + +D Y
Sbjct: 111 -GDGRLRAKVLDFTDAGGRIVEFYYDGI-FEQVLDELGQMPVPPYIKK----ELKDKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GS AAPTAGLHFT LL ++ G+K+ ++TLHVG GTF PVKV + ++H M
Sbjct: 165 QTVYARNPGSAAAPTAGLHFTEELLRKIEQNGVKICYITLHVGLGTFRPVKVRNIEEHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + + A+ +N K G R+++VGTTS R LET ++G + SG+T++FI PG
Sbjct: 225 HHEYFEVGSHAAETINRAKESGKRVIAVGTTSTRTLETVADQNGFVKSGSGWTDLFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YRF+ VD +++NFHLP+STLLMLVSAF G + Y+ AI YRFYS+GD L+
Sbjct: 285 YRFKVVDGMVTNFHLPESTLLMLVSAFAGRDLIMAAYREAIDKRYRFYSFGDAMLII 341
>gi|121535582|ref|ZP_01667389.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Thermosinus carboxydivorans Nor1]
gi|121305822|gb|EAX46757.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Thermosinus carboxydivorans Nor1]
Length = 339
Score = 480 bits (1236), Expect = e-133, Method: Composition-based stats.
Identities = 148/357 (41%), Positives = 201/357 (56%), Gaps = 18/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +FD+ LP IA +P PRD +RL+V+ I +LP +L D +V
Sbjct: 1 MLVTDFDYYLPEELIAQQPCEPRDHSRLLVLDRRTGN---IEHRRFYNLPDYLQPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L G + +I L R++ + W +P K + G + F +
Sbjct: 58 FNNTKVIPARLIGAKA----GTGGKIEVFLLNRLTSDEWETLVKPGKRARPGTQVVFGDE 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L ++ + G ++ F+ SG+ E + +G PLPPYI + D Y
Sbjct: 114 -----LSCEILASTDYGGRIVRFNYSGV-FEDILDRLGETPLPPYIKTRLA----DKDRY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL R+ + GI + F+TLHVG GTF PV V + H M
Sbjct: 164 QTVYAKERGSAAAPTAGLHFTPELLDRIKAKGINLAFITLHVGLGTFRPVTVSNITQHTM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + TA +N K GGRI++VGTT++R LET G + SG+T+IFI PG
Sbjct: 224 HREYYSVSPETAALINQTKQAGGRIIAVGTTAVRTLET-VGAGGFVESGSGWTDIFIYPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YRF+ VD L++NFHLP+STLLMLVSA G E Y A+ YRF+S+GD L+
Sbjct: 283 YRFKIVDALVTNFHLPQSTLLMLVSALAGRENIMNAYHVAVREKYRFFSFGDAMLIL 339
>gi|313904205|ref|ZP_07837584.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Eubacterium
cellulosolvens 6]
gi|313471007|gb|EFR66330.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Eubacterium
cellulosolvens 6]
Length = 344
Score = 480 bits (1235), Expect = e-133, Method: Composition-based stats.
Identities = 146/357 (40%), Positives = 204/357 (57%), Gaps = 15/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F++DLP IA P+ R ++R+M + + D + +++ L D +V
Sbjct: 3 MKTSDFNYDLPVELIAQDPLEDRSASRMMYMDKETG---ELKDEIFTEVIDHLREGDCLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + I L R + W RP K K G + F
Sbjct: 60 LNDTKVIPARLYGTK----KDTGALIEVLLLTRKQNDVWETLVRPGKKCKIGTEIVFGE- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + VID G + FS GI E + +G +PLPPYI K +D Y
Sbjct: 115 --EGLMTGKVIDVTEDGNRFIQFSYEGI-FEEILDRLGEMPLPPYIKHK----LQDKTMY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
T YAK GS AAPTAGLHFT LL ++ + G+K+ VTLHVG GTF PVKV+D H M
Sbjct: 168 NTVYAKNDGSAAAPTAGLHFTKELLEKISAKGVKIAHVTLHVGLGTFRPVKVDDVTQHKM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE+ ++ A+ +N K+ GGR++ VGTTS R LE+AT E+GI+ P S +TNIFI PG
Sbjct: 228 HSELYIVEEDQAKIINDTKAAGGRVICVGTTSCRTLESATDENGILQPGSAWTNIFIYPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+ +D L++NFHLP+STL+MLVSAF G ++ Y+ A+ YRF+S+GD ++
Sbjct: 288 YTFKIMDGLITNFHLPESTLIMLVSAFAGKDKVMHAYETAVEKKYRFFSFGDAMMII 344
>gi|229543705|ref|ZP_04432765.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Bacillus
coagulans 36D1]
gi|229328125|gb|EEN93800.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Bacillus
coagulans 36D1]
Length = 342
Score = 479 bits (1234), Expect = e-133, Method: Composition-based stats.
Identities = 142/357 (39%), Positives = 209/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FD++LP IA P+ R +RLMV+ I + ++ +L D +V
Sbjct: 1 MKLDLFDYELPEELIAQTPLKNRSDSRLMVLDKKTG---EIEHSVFKNITQYLRPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKV+ A+L G++ + +I L ++ + W +P+K +K G ++ F
Sbjct: 58 LNNTKVLPARLFGIK----DETGAKIEVLLLKQLEGDRWETLVKPAKRVKTGTVVRF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L A ++ + G ++ F GI ++ +G +PLPPYI + D Y
Sbjct: 111 -GDGQLSAVCAEELDHGGRVMDFQYEGI-FYEVLNELGKMPLPPYIKEQ----LEDQDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + ++G+K+ ++TLHVG GTF PV E+ ++H M
Sbjct: 165 QTVYAKEPGSAAAPTAGLHFTEALLKEIEAMGVKIVYITLHVGLGTFRPVNEENIENHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + A+ + VK GGR+VSVGTTS R LET A+ DG I SG+T+IFI P
Sbjct: 225 HAEFYQVSEEAARTITEVKENGGRVVSVGTTSTRTLETVASAHDGKIVASSGWTDIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+++A+D L++NFHLPKSTL+M+VSA G E Y+ A+ YRF+S+GD L+
Sbjct: 285 GYQYKAIDALITNFHLPKSTLIMMVSALAGRENILHAYETAVKEKYRFFSFGDAMLI 341
>gi|15895551|ref|NP_348900.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
acetobutylicum ATCC 824]
gi|21263900|sp|Q97GT2|QUEA_CLOAB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|15025288|gb|AAK80240.1|AE007729_7 Queuine synthetase, queA [Clostridium acetobutylicum ATCC 824]
gi|325509700|gb|ADZ21336.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
acetobutylicum EA 2018]
Length = 341
Score = 479 bits (1233), Expect = e-133, Method: Composition-based stats.
Identities = 141/356 (39%), Positives = 201/356 (56%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++FD+ LP IA P RD RLMVV + + D+ +LN D +V
Sbjct: 1 MQLEDFDYYLPEELIAQHPCDKRDECRLMVVDKKSG---EVEHRIFKDVIDYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + ++ L R+ ++W +P K K G F
Sbjct: 58 LNDTRVLPARLIGNKV----GTGGKMEFLLLKRIDKDTWETLVKPGKRAKVGAEFEF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A + G ++ F GI E + +G +PLPPYI + + +Y
Sbjct: 111 -GGGVLKAVIKSIGEDGNRVVEFKYEGI-FEEILDKLGQMPLPPYITE----ELENKEEY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT+ LL ++ + GIK F+TLHVG GTF PVKVE+ + H M
Sbjct: 165 QTVYSKNNGSAAAPTAGLHFTNELLDKIRAKGIKTVFLTLHVGLGTFRPVKVENIESHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + +A +N + GGRI+SVGTTS R LET E G + SG+T+I+I PG
Sbjct: 225 HSEYYMLSKESADTINETRKNGGRIISVGTTSTRTLETIADEKGNVREQSGWTDIYIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+++ VD L++NFHLPKSTL+MLVSA + Y+ A+ + YRF+S+GD +
Sbjct: 285 YKYKIVDGLITNFHLPKSTLVMLVSALSSRDNILNAYKIAVENRYRFFSFGDAMFI 340
>gi|220932067|ref|YP_002508975.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Halothermothrix orenii H 168]
gi|254764280|sp|B8CXG1|QUEA_HALOH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|219993377|gb|ACL69980.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Halothermothrix orenii H 168]
Length = 341
Score = 478 bits (1232), Expect = e-133, Method: Composition-based stats.
Identities = 146/357 (40%), Positives = 207/357 (57%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V+EFD++LP IA +P+ RD +RLMV+H I + + ++ FL D +V
Sbjct: 1 MKVEEFDYELPEELIAQKPLPNRDDSRLMVLHRKTG---EIEETVFKNIIKFLEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + I L ++ W V RP + +KKG+ + F
Sbjct: 58 LNDTKVIPARLFGEKI----PSGTRIEVLLLKSITEGLWEVLVRPGRRMKKGNRVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L V D + G ++ F G + ++ I +G +PLPPYI RK D Y
Sbjct: 111 -GDGKLVGIVKDYTDFGGRIMQFEYDG-DFDKVIEELGEMPLPPYITRK----VEDKGRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +GSVAAPTAGLHFT LL ++ GI + ++TLHVG GTF PV+ E+ +DH M
Sbjct: 165 QTVYARKKGSVAAPTAGLHFTDRLLKKIKEQGIGIIYLTLHVGLGTFRPVRAENVEDHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + K +G ++++VGTT R LE+A E + G+T+IFI PG
Sbjct: 225 HSEYFEVSTDVVNRIKETKEKGKKVIAVGTTVTRALESAAVEKRHLKAMRGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+ +D L++NFHLPKSTLLMLVSAF G + Y+ AI + YRF+S+GD L+
Sbjct: 285 YNFKVIDGLITNFHLPKSTLLMLVSAFAGKDMVMSAYKLAIKNKYRFFSFGDAMLIL 341
>gi|312792494|ref|YP_004025417.1| s-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor kristjanssonii 177R1B]
gi|312179634|gb|ADQ39804.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor kristjanssonii 177R1B]
Length = 346
Score = 478 bits (1232), Expect = e-133, Method: Composition-based stats.
Identities = 150/359 (41%), Positives = 208/359 (57%), Gaps = 18/359 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +F +DLP IA +PV PRDS+RLMV+ P+ I + D+ +LN D +V
Sbjct: 5 KLSDFHYDLPEELIAQKPVEPRDSSRLMVILPD----GTIEHRIFRDIVEYLNEGDCLVL 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NN+KVI A+L G R I L R+ N+W V RP K +KG F
Sbjct: 61 NNSKVIPARLIGQR----EDTGSFIEFLLVKRLDINTWEVMTRPGKKARKGRKFVF---- 112
Query: 122 GQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A V+ + G ++ F G+ E + +G IPLPPYI + D Y
Sbjct: 113 GNGELKAEVLHVNQDEGTRIVRFYYEGV-FEEVLERLGKIPLPPYIKE----ELDDLSRY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K+ GS AAPTAGLHFT LL R+ G+++ +VTLHVG GTF PVKVE+ ++H M
Sbjct: 168 QTVYSKVPGSAAAPTAGLHFTEELLDRISKKGVEILYVTLHVGLGTFKPVKVENVEEHKM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I A +N K G R+++VGTTS R+LE+ + E G + G+T+IFI PG
Sbjct: 228 HEEYYEISQDVADKINRAKEVGKRVIAVGTTSCRVLESCSDETGRVKAKKGWTDIFIYPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
Y F+ +D L++NFHLP +TL+MLV AF G E Y+ A+ YRF+S+GD L+ ++
Sbjct: 288 YNFKVLDGLVTNFHLPDTTLMMLVCAFGGYERIMNAYKIAVDMRYRFFSFGDAMLILRR 346
>gi|167037429|ref|YP_001665007.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|256752587|ref|ZP_05493441.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter ethanolicus CCSD1]
gi|320115842|ref|YP_004186001.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|238687693|sp|B0K958|QUEA_THEP3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|166856263|gb|ABY94671.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|256748525|gb|EEU61575.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter ethanolicus CCSD1]
gi|319928933|gb|ADV79618.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter brockii subsp. finnii Ako-1]
Length = 341
Score = 478 bits (1232), Expect = e-133, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 208/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M EF F+LP IA P+ R S+RLM+++ I + ++ +L D +V
Sbjct: 1 MKRSEFYFELPEELIAQEPLEDRASSRLMILNKKTG---EIEHDIFKNITKYLKPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L G R +I L R+S N W + +P + K G F
Sbjct: 58 LNNTKVIPARLIGRR----EDSGGKIEFVLLKRISNNEWEILVKPGRRAKIGSKFVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L A ++D + G ++ F G+ E + +G +P+PPYI +K ++ Y
Sbjct: 111 -GNGELIAEILDTTDVGGRIVRFYYEGV-FEEVLDKLGEMPVPPYIKKK----LKNKDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ +G+K F+TLHVG GTF PVK E ++H M
Sbjct: 165 QTVYAKYEGSAAAPTAGLHFTEELLEKIRQMGVKTVFITLHVGLGTFRPVKEEVIENHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A+ +N + GGRI++VGTTS R LET EDG I SG+T+IFI PG
Sbjct: 225 HEEFYIVTKEAAEEINETRKSGGRIIAVGTTSTRTLETVADEDGYIKEKSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+A+D +++NFHLP+STL+M+VSAF G E + Y+ A+ YRF+S+GD L+
Sbjct: 285 YKFKAIDGMITNFHLPESTLIMMVSAFAGKENIMRAYKIAVEKKYRFFSFGDAMLII 341
>gi|308070377|ref|YP_003871982.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein queA) [Paenibacillus polymyxa E681]
gi|305859656|gb|ADM71444.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein queA) [Paenibacillus polymyxa E681]
Length = 342
Score = 478 bits (1231), Expect = e-133, Method: Composition-based stats.
Identities = 146/359 (40%), Positives = 213/359 (59%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V ++DF+LP + IA P+ R ++RL+ ++ N + H SD+ +L D +V
Sbjct: 1 MNVNDYDFELPETLIAQTPLLDRSASRLLTLNKNNG---EVGHHTFSDIVQYLQPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G++ + L ++ + W +P K +KKG ++ F +
Sbjct: 58 LNDTRVIPARLFGIK----EDTGAKAEVLLLKQLQGDRWKALVKPGKKLKKGAVIVFGDE 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L+A + ++ + G +L FS GI + ++ +G +PLPPYI + D Y
Sbjct: 114 -----LKAVIEEEGDMGGRVLSFSYDGI-FQEILNRLGQMPLPPYIKEQLD----DRERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +GS AAPTAGLHFT LL ++ G+ V F+TLHVG GTF P+ V+ ++H+M
Sbjct: 164 QTVYARHEGSAAAPTAGLHFTEELLDQIKKKGVTVAFITLHVGLGTFRPMSVDTIEEHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE--DGIINPWSGFTNIFIT 298
H E + TA LN K+RGGR+V+VGTTS R LET + DG++ SG+T IFI
Sbjct: 224 HEEYYSLSQETADVLNETKARGGRVVAVGTTSCRTLETVGNKFLDGVLEASSGWTQIFIY 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY FR VD +++NFHLPKSTL+MLVSA G E YQ AI YRF+S+GD ++
Sbjct: 284 PGYEFRVVDAMITNFHLPKSTLVMLVSALAGRENIMHAYQEAIDRQYRFFSFGDAMFIY 342
>gi|238019734|ref|ZP_04600160.1| hypothetical protein VEIDISOL_01609 [Veillonella dispar ATCC 17748]
gi|237863775|gb|EEP65065.1| hypothetical protein VEIDISOL_01609 [Veillonella dispar ATCC 17748]
Length = 341
Score = 478 bits (1231), Expect = e-133, Method: Composition-based stats.
Identities = 153/356 (42%), Positives = 205/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD++LP IA PV PRD+ARL+ + DL L+ D +V
Sbjct: 1 MKVTDFDYELPEELIAQHPVEPRDTARLLTLDKVTGEVAHKEH--FYDLLDELHEGDVLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L G R ++ L N W +P K G ++ F
Sbjct: 59 FNNTKVIPARLYGQR----QGSGGKVEVLLLTPCGENRWECLVKPGKKCPIGQVIEF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
RL TVIDK G ++ F+ G+ + I +G +PLPPYI K D Y
Sbjct: 112 --DDRLSGTVIDKTEFGGRIIEFTCDGV-FDDVIQEIGEMPLPPYIHEK----LEDKDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ + G+++ FVTLHVG GTF PV E +DH M
Sbjct: 165 QTVYAKEKGSAAAPTAGLHFTPELLEKIKAKGVELEFVTLHVGLGTFRPVSAETIEDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA +N+ K G RI++VGTTS+R LE+AT +DG++ SG+T IFI PG
Sbjct: 225 HSEFFVVSQDTADRINAAKRNGRRIIAVGTTSVRTLESATNDDGVLQGISGWTQIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STLLML+SA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YKFKMIDALVTNFHLPQSTLLMLISALAGREHCLAAYEEAVRERYRFFSFGDAMFI 340
>gi|312134251|ref|YP_004001589.1| s-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor owensensis OL]
gi|311774302|gb|ADQ03789.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor owensensis OL]
Length = 345
Score = 478 bits (1231), Expect = e-133, Method: Composition-based stats.
Identities = 148/358 (41%), Positives = 208/358 (58%), Gaps = 18/358 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +F +DLP IA +PV PRDS+RLMV+ P+ I + D+ +LN D +V
Sbjct: 5 KLSDFHYDLPDELIAQKPVEPRDSSRLMVILPD----GTIEHRIFRDIVEYLNEGDCLVL 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NN+KVI A+L G R I L R+ N+W V RP K ++G F
Sbjct: 61 NNSKVIPARLIGQR----EDTGSFIEFLLVKRLDINTWEVMTRPGKKARRGRKFIF---- 112
Query: 122 GQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A V+ + G ++ F G+ E + +G IPLPPYI + D Y
Sbjct: 113 GNGELKAKVLHVNQDEGTRIVRFYYEGV-FEEVLEKLGKIPLPPYIKE----ELEDLSRY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K+ GS AAPTAGLHFT LL ++ G+++ +VTLHVG GTF PVKVE+ ++H M
Sbjct: 168 QTVYSKVPGSAAAPTAGLHFTEELLKKIEEKGVEILYVTLHVGLGTFKPVKVENIEEHRM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I A +N K G R+++VGTTS R+LE+ + E+G + G+T+IFI PG
Sbjct: 228 HDEYYEISQEVADRINKAKEFGKRVIAVGTTSCRVLESCSDENGRLKAKKGWTDIFIYPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y F+ +D L++NFHLP +TL+MLV AF G E Y+ A+ YRF+S+GD L+ +
Sbjct: 288 YEFKVLDGLVTNFHLPDTTLMMLVCAFGGYERIMNAYKIAVEMKYRFFSFGDAMLILR 345
>gi|326204477|ref|ZP_08194334.1| LOW QUALITY PROTEIN:
S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Clostridium papyrosolvens DSM 2782]
gi|325985270|gb|EGD46109.1| LOW QUALITY PROTEIN:
S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Clostridium papyrosolvens DSM 2782]
Length = 340
Score = 478 bits (1231), Expect = e-133, Method: Composition-based stats.
Identities = 149/356 (41%), Positives = 201/356 (56%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+ LP IA P+ RD +RLMV++ I L +D+ +L+ D +V
Sbjct: 1 MDLHDFDYYLPEELIAQHPMEKRDMSRLMVLNKETG---EIEHKLFTDIVNYLDEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G + +I L RV + W V RP K K G F
Sbjct: 58 LNNTRVIPARLLGEK----EGTGGKIEFVLLKRVEGDKWEVILRPGKKAKPGSRFVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A +++ + G L+ F G+ E + VG +PLPPYI K Y
Sbjct: 111 -GNGELKAEILEVLDEGNRLVRFIYDGV-FEEILDRVGIMPLPPYITEKLEN----PERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK+ GS AAPTAGLHFT LL L G+K+ +V LHVG GTF PVKV+D H M
Sbjct: 165 QTVYAKVNGSAAAPTAGLHFTKELLDSLTRKGVKIAYVMLHVGLGTFRPVKVDDITQHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I T +N + +G ++V+VGTTS R+LET + G I P G+T+IFI PG
Sbjct: 225 HSEYYSISQETCDIINDTRQKGKKVVAVGTTSCRVLET-VGKSGRIAPCDGWTDIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF+ VD L++NFHLP+STL+MLVS+ G + Y A+ YRF+S+GD +
Sbjct: 284 YRFKVVDRLITNFHLPESTLIMLVSSLAGRDNVMHAYNVAVEEKYRFFSFGDAMFI 339
>gi|167040096|ref|YP_001663081.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter sp. X514]
gi|300914179|ref|ZP_07131495.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter sp. X561]
gi|307724585|ref|YP_003904336.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter sp. X513]
gi|238687548|sp|B0K0M0|QUEA_THEPX RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|166854336|gb|ABY92745.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter sp. X514]
gi|300889114|gb|EFK84260.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter sp. X561]
gi|307581646|gb|ADN55045.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter sp. X513]
Length = 341
Score = 478 bits (1231), Expect = e-133, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 207/357 (57%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M EF F+LP IA P+ R S+RLM+++ I + ++ +L D +V
Sbjct: 1 MKRSEFYFELPEELIAQEPLEDRASSRLMILNKKTG---EIEHDIFKNITKYLKPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L G R +I L R+S N W + +P + K G F
Sbjct: 58 LNNTKVIPARLIGRR----EDSGGKIEFVLLKRISNNEWEILVKPGRRAKIGSKFVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L A ++D G ++ F G+ E + +G +P+PPYI +K ++ Y
Sbjct: 111 -GNGELIAEILDTTEVGGRIVRFYYEGV-FEEVLDKLGEMPVPPYIKKK----LKNKDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ +G+K F+TLHVG GTF PVK E ++H M
Sbjct: 165 QTVYAKYEGSAAAPTAGLHFTEELLEKIRQMGVKTVFITLHVGLGTFRPVKEEVIENHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A+ +N + GGRI++VGTTS R LET EDG I SG+T+IFI PG
Sbjct: 225 HEEFYIVTKEAAEEINETRKSGGRIIAVGTTSTRTLETVADEDGYIKEKSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+A+D +++NFHLP+STL+M+VSAF G E + Y+ A+ YRF+S+GD L+
Sbjct: 285 YKFKAIDGMITNFHLPESTLIMMVSAFAGKENIMRAYKIAVEKKYRFFSFGDAMLII 341
>gi|225018503|ref|ZP_03707695.1| hypothetical protein CLOSTMETH_02450 [Clostridium methylpentosum
DSM 5476]
gi|224948704|gb|EEG29913.1| hypothetical protein CLOSTMETH_02450 [Clostridium methylpentosum
DSM 5476]
Length = 340
Score = 478 bits (1230), Expect = e-133, Method: Composition-based stats.
Identities = 138/357 (38%), Positives = 195/357 (54%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F FDLP IA P+ PRD +R++ + N ++ D+ L D +V
Sbjct: 1 MNTSDFYFDLPKELIAQTPIEPRDHSRMLCLDRNTGK---LAHKHFYDVVDLLEPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+++V+ A+L G + +I L + + W + +P K K G F
Sbjct: 58 INDSRVLPARLYGKK----QGTGSDIEFLLLEQKQQDVWEILCKPGKKAKVGAKFTFG-- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L+A +I+ + G + F+ G + + +G +PLPPYI K D Y
Sbjct: 112 ---GLLDAEIIEVCDDGNRIAKFTYDGSFFD-ILDQIGQMPLPPYITEK----LEDKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA GS AAPTAGLHFT LL +L + G+ + VTLHVG GTF PVKV+D H M
Sbjct: 164 QTVYADELGSAAAPTAGLHFTPELLGKLENKGVNIARVTLHVGLGTFRPVKVDDVTKHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I TA +N K+ G R+++VGTTS R LE+ T G I G+T+IFI PG
Sbjct: 224 HSEHYAISQETADLINRTKANGKRVIAVGTTSCRTLESVATFTGGIQKAEGYTDIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+ +D L++NFHLP+STL+MLVSAF G ++ + Y A+ YRF+S+GD +
Sbjct: 284 YEFKVLDGLITNFHLPESTLIMLVSAFAGYDQVMEAYHTAVQERYRFFSFGDAMCIL 340
>gi|289578214|ref|YP_003476841.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter italicus Ab9]
gi|289527927|gb|ADD02279.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter italicus Ab9]
Length = 341
Score = 478 bits (1230), Expect = e-133, Method: Composition-based stats.
Identities = 149/357 (41%), Positives = 208/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M EF F+LP IA P+ R S+RLMV++ I + ++ +L + D +V
Sbjct: 1 MKRSEFYFELPKELIAQEPLEDRSSSRLMVLNKKTG---EIEHDIFKNITKYLKAGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G R +I L R+S N W +P + K G F
Sbjct: 58 LNDTKVIPARLIGRR----EDSGGKIEFVLIKRISSNEWETLVKPGRRAKIGSRFVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L A V+D G ++ F G+ E + +G +P+PPYI +K ++ Y
Sbjct: 111 -GTGELIAEVLDTTEAGGRIVRFYYEGV-FEEVLDKLGEMPVPPYIKKK----LKNKDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ +G+K F+TLHVG GTF PVK E+ ++H M
Sbjct: 165 QTVYAKYEGSAAAPTAGLHFTKELLEKIKQMGVKTVFITLHVGLGTFRPVKEEEIENHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A +N + GGRI++VGTTS R LET E+G + SG+T+IFI PG
Sbjct: 225 HEEFYIVTKEAANEINETRKSGGRIIAVGTTSTRTLETVADENGYVKEKSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+A+D +++NFHLP+STL+M+VSAF G E + YQ AI H YRF+S+GD L+
Sbjct: 285 YKFKAIDGMITNFHLPESTLIMMVSAFAGRENIMRAYQVAIEHKYRFFSFGDAMLII 341
>gi|302870943|ref|YP_003839579.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor obsidiansis OB47]
gi|302573802|gb|ADL41593.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor obsidiansis OB47]
Length = 346
Score = 477 bits (1229), Expect = e-133, Method: Composition-based stats.
Identities = 148/359 (41%), Positives = 208/359 (57%), Gaps = 18/359 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +F +DLP IA +PV PRD++RLMV+ P+ I + D+ +LN D +V
Sbjct: 5 KLSDFHYDLPDELIAQKPVEPRDNSRLMVILPD----GTIEHRIFRDIVEYLNEGDCLVL 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NN+KVI A+L G R I L R+ N+W V RP K ++G F
Sbjct: 61 NNSKVIPARLIGQR----EDTGSFIEFLLVKRLDINTWEVMTRPGKKARRGRKFVF---- 112
Query: 122 GQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A V+ + G ++ F G+ E + +G IPLPPYI + D Y
Sbjct: 113 GNGELKAEVLHVNQDEGTRIVRFYYEGV-FEEVLEKLGKIPLPPYIKE----ELEDLSRY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K+ GS AAPTAGLHFT LL ++ G+++ +VTLHVG GTF PVKVE+ ++H M
Sbjct: 168 QTVYSKVPGSAAAPTAGLHFTEELLEKISKKGVEILYVTLHVGLGTFKPVKVENVEEHKM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I A +N K G R+++VGTTS R+LE+ + E G + G+TNIFI PG
Sbjct: 228 HEEYYEISQDVADRINRAKELGKRVIAVGTTSCRVLESCSDEAGRVKAQKGWTNIFIYPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
Y F+ +D L++NFHLP +TL+MLV AF G E Y+ A+ YRF+S+GD L+ ++
Sbjct: 288 YNFKVLDGLVTNFHLPDTTLMMLVCAFGGYERIMNAYKIAVDMRYRFFSFGDAMLILRR 346
>gi|146295225|ref|YP_001178996.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor saccharolyticus DSM 8903]
gi|145408801|gb|ABP65805.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Caldicellulosiruptor saccharolyticus DSM 8903]
Length = 345
Score = 477 bits (1229), Expect = e-133, Method: Composition-based stats.
Identities = 154/358 (43%), Positives = 211/358 (58%), Gaps = 18/358 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +F +DLP IA +P+ PRDS+RLMV+HP+ I + D+ +LN D +V
Sbjct: 5 KLSDFHYDLPEELIAQKPIEPRDSSRLMVIHPD----GRIDHRIFRDIIEYLNEGDCLVL 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NN+KVI A+L G R I L R+S ++W V RP K +KG F
Sbjct: 61 NNSKVIPARLIGQR----EDTGSFIEFLLVKRLSIDTWEVMTRPGKKARKGRRFVF---- 112
Query: 122 GQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A V+ + G ++ F G+ E + +G IPLPPYI K Y
Sbjct: 113 GDGRLKAEVLHVNQDEGTRIVRFEYEGV-FEDILESLGEIPLPPYIKEKLEN----VERY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+KI GS AAPTAGLHFT LLSR+ G++ +VTLHVG GTF PVKVE+ ++H M
Sbjct: 168 QTVYSKIPGSAAAPTAGLHFTEELLSRISKKGVQTLYVTLHVGLGTFKPVKVENIEEHKM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I A+ +N K G R+++VGTTS R+LE+A E G++ G+T+IFI PG
Sbjct: 228 HEEYYEISEDVAERINEAKRLGKRVIAVGTTSCRVLESAAVEKGLVKAQKGWTDIFIYPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y F+ +D L++NFHLP +TL+MLV AF G E Y+ A+ YRF+S+GD L+ +
Sbjct: 288 YEFKILDGLVTNFHLPDTTLMMLVCAFGGYERIMNAYKIAVEQRYRFFSFGDAMLILK 345
>gi|297544495|ref|YP_003676797.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter mathranii subsp. mathranii str. A3]
gi|296842270|gb|ADH60786.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermoanaerobacter mathranii subsp. mathranii str. A3]
Length = 341
Score = 477 bits (1229), Expect = e-133, Method: Composition-based stats.
Identities = 149/357 (41%), Positives = 208/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M EF F+LP IA P+ R S+RLMV++ I + ++ +L + D +V
Sbjct: 1 MKRSEFYFELPKELIAQEPLEDRSSSRLMVLNKKTG---EIEHDIFKNITKYLKAGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G R +I L R+S N W +P + K G F
Sbjct: 58 LNDTKVIPARLIGRR----EDSGGKIEFVLIKRISSNEWETLVKPGRRAKIGSRFVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L A V+D G ++ F G+ E + +G +P+PPYI +K ++ Y
Sbjct: 111 -GTGELIAEVLDATEAGGRIVRFYYEGV-FEEVLDKLGEMPVPPYIKKK----LKNKDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ +G+K F+TLHVG GTF PVK E+ ++H M
Sbjct: 165 QTVYAKYEGSAAAPTAGLHFTKELLEKIKQMGVKTVFITLHVGLGTFRPVKEEEIENHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A +N + GGRI++VGTTS R LET E+G + SG+T+IFI PG
Sbjct: 225 HEEFYIVTKEAANEINETRKSGGRIIAVGTTSTRTLETVADENGYVKEKSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+A+D +++NFHLP+STL+M+VSAF G E + YQ AI H YRF+S+GD L+
Sbjct: 285 YKFKAIDGMITNFHLPESTLIMMVSAFAGRENIMRAYQVAIEHKYRFFSFGDAMLII 341
>gi|289422359|ref|ZP_06424205.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Peptostreptococcus anaerobius 653-L]
gi|289157194|gb|EFD05813.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Peptostreptococcus anaerobius 653-L]
Length = 340
Score = 477 bits (1229), Expect = e-133, Method: Composition-based stats.
Identities = 143/355 (40%), Positives = 195/355 (54%), Gaps = 17/355 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F + LP IA P+ R S+RLMV+ I + D+ +L D +V
Sbjct: 1 MKTSDFKYYLPEELIAQVPIKDRSSSRLMVLDKATG---EIEHRIFKDIIDYLEEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G + + L R W +P K K G + F
Sbjct: 58 LNDTRVIPARLIGEKES----SGGRVEFLLLKR-DGELWETLVKPGKRAKIGSRISF--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L A V+D G ++ F GI E + +G +PLPPYI K D Y
Sbjct: 110 -GGGKLVAEVVDIVEDGSRMVKFIYDGI-FEEVLDELGNMPLPPYITAKLD----DKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL + S G+ + FVTLHVG GTF PVKV+D + H M
Sbjct: 164 QTVYSKHKGSAAAPTAGLHFTECLLEEIKSKGVDLAFVTLHVGLGTFRPVKVDDVESHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ +N K G RI+ VGTTS R +E+ +EDG ++ +G+T+IFI PG
Sbjct: 224 HSEFYVVSEDAAEKINRAKENGKRIICVGTTSCRTIESVASEDGKMHAKTGWTDIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
Y+F+ VD L++NFHLP+STL+MLVSA E Y+ A+ YRF+S+GD
Sbjct: 284 YKFKVVDNLITNFHLPESTLVMLVSALSKKEYVLSAYEEAVKEKYRFFSFGDAMF 338
>gi|220927982|ref|YP_002504891.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
cellulolyticum H10]
gi|219998310|gb|ACL74911.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Clostridium
cellulolyticum H10]
Length = 340
Score = 477 bits (1229), Expect = e-133, Method: Composition-based stats.
Identities = 149/356 (41%), Positives = 201/356 (56%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+ LP IA P+ RD +RLMV+ I L DL +L+ D +V
Sbjct: 1 MNLHDFDYYLPEELIAQHPLEKRDMSRLMVLDKQTG---EIEHKLFKDLFNYLDEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G + +I L RV ++W V RP K K G F
Sbjct: 58 LNNTRVIPARLLGEK----EGTGGKIEFVLLKRVEGDNWEVILRPGKKAKPGSKFVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A +++ + G L+ F G+ E + VG +PLPPYI K Y
Sbjct: 111 -GNGELKAEILEVLDEGNRLVRFIYDGV-FEEILDRVGVMPLPPYITEKLDN----PERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK+ GS AAPTAGLHFT LL L+ G+K+ +V LHVG GTF PVKV+D H M
Sbjct: 165 QTVYAKVNGSAAAPTAGLHFTKELLDSLVHKGVKIAYVMLHVGLGTFRPVKVDDITQHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I T +N + +G ++V+VGTTS R+LET ++G I P G+T+IFI PG
Sbjct: 225 HSEYYSISQETCDIINVTREKGKKVVAVGTTSCRVLETI-GKNGKIAPCDGWTDIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+ VD L++NFHLP+STL+MLVS+ G + Y A+ YRF+S+GD +
Sbjct: 284 YEFKVVDRLITNFHLPESTLIMLVSSLAGRDNVLHAYSVAVEEKYRFFSFGDAMFI 339
>gi|125717594|ref|YP_001034727.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK36]
gi|166218750|sp|A3CLX2|QUEA_STRSV RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|125497511|gb|ABN44177.1| S-adenosylmethio nine:tRNA-ribosyltransferase-isomerase (queuine
synthetase), putative [Streptococcus sanguinis SK36]
Length = 342
Score = 477 bits (1229), Expect = e-132, Method: Composition-based stats.
Identities = 158/357 (44%), Positives = 211/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV SD + L DA+V
Sbjct: 1 MNTADFDFDLPEELIAQTPLEKRDASRLLVVDKETGA---FSDQHFDQIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGIK----PETGGHVELLLLKNTQGDDWEVLAKPAKRLRVGAQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATVI++ G ++ FS GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVIEELEHGGRIVRFSYEGIFLE-VLESLGEMPLPPYIHEKLA----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V+ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLEQIAAKGVKLVYLTLHVGLGTFRPVSVDSLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ GGR+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRQVKANGGRVIAVGTTSIRTLETIGSKFQGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY ++ VD +NFHLPKSTL+MLVSAF G T + Y+HAI+ YRF+S+GD +
Sbjct: 285 GYNWKVVDAFSTNFHLPKSTLVMLVSAFAGRSLTLEAYEHAIAERYRFFSFGDAMFI 341
>gi|51892303|ref|YP_074994.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase
[Symbiobacterium thermophilum IAM 14863]
gi|81610582|sp|Q67Q93|QUEA_SYMTH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|51855992|dbj|BAD40150.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase
[Symbiobacterium thermophilum IAM 14863]
Length = 341
Score = 477 bits (1228), Expect = e-132, Method: Composition-based stats.
Identities = 154/357 (43%), Positives = 213/357 (59%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+DLP IA +PV PRD++RLMVVH I DLP +L D +V
Sbjct: 1 MRLSDFDYDLPKELIAQKPVEPRDASRLMVVHRASGA---IEHRCFRDLPEYLRPGDGLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N T+V+ A+L G R + + L R+ + W +P K + G+ + F
Sbjct: 58 INETRVMPARLLGSR----EQTGGAMEVLLLKRLDRDRWETLVKPGKKARPGERIVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L TV+ + G ++ F G+ E + +G +PLPPYI + + Y
Sbjct: 111 -GDGLLVGTVVGPTDYGGRVIDFHYEGV-FENLLERLGQMPLPPYIHEQ----LEEPERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GS AAPTAGLHFT+ LL RL + G++++ +TLHVG GTF PV+VED H M
Sbjct: 165 QTVYAREWGSAAAPTAGLHFTAELLDRLAARGVEIHRITLHVGLGTFRPVEVEDPTQHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +N+V+ GGR+V+VGTTS+R LET EDG + P G+T+IFI PG
Sbjct: 225 HSEFYHVSPEAAAGINAVRKGGGRLVAVGTTSVRTLETVADEDGTVRPGEGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YRF+AVD L++NFHLPKSTLLMLVSA G + + Y+ A++ YRF+S+GD L+
Sbjct: 285 YRFKAVDALVTNFHLPKSTLLMLVSALAGHDLIMRAYREAVAQRYRFFSFGDAMLIL 341
>gi|56421123|ref|YP_148441.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Geobacillus
kaustophilus HTA426]
gi|81557813|sp|Q5KWR3|QUEA_GEOKA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|56380965|dbj|BAD76873.1| S-adenosylmethionine tRNA ribosyltransferase [Geobacillus
kaustophilus HTA426]
Length = 342
Score = 477 bits (1228), Expect = e-132, Method: Composition-based stats.
Identities = 148/358 (41%), Positives = 204/358 (56%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF LP IA P+ R ++RLMV+ I ++ ++LN D +V
Sbjct: 1 MKVDLFDFHLPEELIAQTPLPDRAASRLMVLDKRTGA---IRHETFRNIISYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L ++ + W +P K +K G L F
Sbjct: 58 LNDTRVMPARLYGEK----EETGGTVEVLLLKQLDGDRWETLVKPGKRVKPGTKLTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +LEA +D G +L FS G+ ++ +G +PLPPYI K D Y
Sbjct: 111 -GEGKLEAVCLDTLEHGGRVLEFSYDGL-FYEVLAELGEMPLPPYIKEKLD----DPERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GS AAPTAGLHFT LL + G+ + F+TLHVG GTF PV+V+D + H M
Sbjct: 165 QTVYAREIGSAAAPTAGLHFTEELLDAIREKGVHIVFITLHVGLGTFRPVQVDDVEKHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA+ LN V+ +GGRI++VGTTS R LET A +G SG+T+IFI P
Sbjct: 225 HAEFYQMSEETAETLNRVREQGGRIIAVGTTSTRTLETIAGKHNGRFVAESGWTDIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY F+ +D L++NFHLPKSTL+MLVSA G E YQ A+ YRF+S+GD L+
Sbjct: 285 GYEFKGIDGLVTNFHLPKSTLIMLVSALAGRENILHAYQVAVKERYRFFSFGDAMLII 342
>gi|89895210|ref|YP_518697.1| hypothetical protein DSY2464 [Desulfitobacterium hafniense Y51]
gi|219669641|ref|YP_002460076.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Desulfitobacterium hafniense DCB-2]
gi|122482413|sp|Q24UN9|QUEA_DESHY RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|254764274|sp|B8FQV3|QUEA_DESHD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|89334658|dbj|BAE84253.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219539901|gb|ACL21640.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfitobacterium hafniense DCB-2]
Length = 341
Score = 477 bits (1228), Expect = e-132, Method: Composition-based stats.
Identities = 151/357 (42%), Positives = 212/357 (59%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++FDF+LP RIA PV PRDS+RLMV++ I + +LP L + D +V
Sbjct: 1 MKLEDFDFELPEDRIAQHPVEPRDSSRLMVMNRWTG---EIEHRVFRELPELLQAGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G + + +I C L R + W +P K +K G + F
Sbjct: 58 VNNTRVIPARLIGEK----EGTQAKIECLLLTRRDKDVWETLIKPGKRLKAGQTVVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L +++ G L+ F+ GI E + +G +PLPPYI + +D Y
Sbjct: 111 -GDGLLRGELLEILPDGNRLVRFNYQGI-FEEVLDQLGNMPLPPYITEQ----LQDKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL RL G+++ + LHVG GTF PVKVE+ ++H M
Sbjct: 165 QTIYAKESGSAAAPTAGLHFTPELLERLQDKGVEIVEILLHVGLGTFRPVKVENVEEHTM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ +N KS+G R+++VGTT+ R LE+ E+G I G+T+I+I PG
Sbjct: 225 HSEYYRVTPDAAERINRAKSQGRRVIAVGTTASRTLESVAGENGRIEGKEGWTDIYIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+ +D L++NFH PKSTL+MLVSA G ++ K YQ AI+ YRFYS+GD ++
Sbjct: 285 YTFKILDGLITNFHFPKSTLVMLVSALAGRDQILKAYQIAIAEGYRFYSFGDAMMIL 341
>gi|325697145|gb|EGD39032.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK160]
Length = 342
Score = 477 bits (1228), Expect = e-132, Method: Composition-based stats.
Identities = 158/357 (44%), Positives = 213/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV V SD + L DA+V
Sbjct: 1 MNTADFDFDLPEELIAQTPLEKRDASRLLVVDKETG---VFSDQHFDQIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGIK----PETGGHVELLLLKNTQGDDWEVLAKPAKRLRVGAQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+D+ + G ++ F+ GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVVDELDHGGRIVRFAYEGIFLE-VLESLGEMPLPPYIHEKLA----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V+ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLEQIAAKGVKLVYLTLHVGLGTFRPVSVDSLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ GGR+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRQVKANGGRVIAVGTTSIRTLETIGSKFQGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY ++ VD +NFHLPKSTL+MLVSAF G T + Y+HAI+ YRF+S+GD +
Sbjct: 285 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRSLTLEAYEHAIAERYRFFSFGDAMFI 341
>gi|312877417|ref|ZP_07737381.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor lactoaceticus 6A]
gi|311795806|gb|EFR12171.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor lactoaceticus 6A]
Length = 346
Score = 477 bits (1228), Expect = e-132, Method: Composition-based stats.
Identities = 149/359 (41%), Positives = 208/359 (57%), Gaps = 18/359 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +F +DLP IA +PV PRDS+RLMV+ P+ I + ++ +LN D +V
Sbjct: 5 KLSDFHYDLPEELIAQKPVEPRDSSRLMVILPD----GTIEHRIFREIVEYLNEGDCLVL 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NN+KVI A+L G R I L R+ N+W V RP K +KG F
Sbjct: 61 NNSKVIPARLIGQR----EDTGSFIEFLLVKRLDINTWEVMTRPGKKARKGRKFVF---- 112
Query: 122 GQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A V+ + G ++ F G+ E + +G IPLPPYI + D Y
Sbjct: 113 GNGELKAEVLHVNQDEGTRIVRFYYEGV-FEEVLERLGKIPLPPYIKE----ELDDLSRY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K+ GS AAPTAGLHFT LL R+ G+++ +VTLHVG GTF PVKVE+ ++H M
Sbjct: 168 QTVYSKVPGSAAAPTAGLHFTEELLDRISKKGVEILYVTLHVGLGTFKPVKVENVEEHKM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I A +N K G R+++VGTTS R+LE+ + E G + G+T+IFI PG
Sbjct: 228 HEEYYEISQDVADKINRAKEVGKRVIAVGTTSCRVLESCSDETGRVKAKKGWTDIFIYPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
Y F+ +D L++NFHLP +TL+MLV AF G E Y+ A+ YRF+S+GD L+ ++
Sbjct: 288 YNFKVLDGLVTNFHLPDTTLMMLVCAFGGYERIMNAYKIAVDMRYRFFSFGDAMLILRR 346
>gi|312128550|ref|YP_003993424.1| s-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor hydrothermalis 108]
gi|311778569|gb|ADQ08055.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor hydrothermalis 108]
Length = 346
Score = 477 bits (1228), Expect = e-132, Method: Composition-based stats.
Identities = 148/359 (41%), Positives = 208/359 (57%), Gaps = 18/359 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +F +DLP IA +PV PRDS+RLMV+ P+ + + D+ +LN D +V
Sbjct: 5 KLSDFHYDLPDELIAQKPVEPRDSSRLMVILPD----GRLEHRIFRDIVEYLNEGDCLVL 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NN+KVI A+L G R I L R+ N+W V RP K +KG F
Sbjct: 61 NNSKVIPARLIGQR----EDTGSFIEFLLVKRLDINTWEVMTRPGKKARKGRKFVF---- 112
Query: 122 GQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A V+ G ++ F G+ E + +G IPLPPYI + D Y
Sbjct: 113 GNGELKAEVLHVNQEEGTRIVRFYYEGV-FEEVLERLGKIPLPPYIKE----ELDDLSRY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K+ GS AAPTAGLHFT LL ++ G+++ +VTLHVG GTF PVKVE+ ++H M
Sbjct: 168 QTVYSKVPGSAAAPTAGLHFTEELLEKISKKGVEILYVTLHVGLGTFKPVKVENVEEHKM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I A+ +N K G R+++VGTTS R+LE+ E+G + G+T+IFI PG
Sbjct: 228 HEEYYEISEDVAERINRAKELGKRVIAVGTTSCRVLESCCDENGKVRAKKGWTDIFIYPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
Y F+ +D L++NFHLP +TL+MLV AF G E Y+ A+ YRF+S+GD L+ ++
Sbjct: 288 YEFKVLDGLVTNFHLPDTTLMMLVCAFGGYERIMNAYKIAVDMRYRFFSFGDAMLILRR 346
>gi|325688305|gb|EGD30324.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK72]
Length = 342
Score = 477 bits (1227), Expect = e-132, Method: Composition-based stats.
Identities = 155/357 (43%), Positives = 211/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV SD + L DA+V
Sbjct: 1 MNTADFDFDLPEELIAQTPLEKRDASRLLVVDKETGA---FSDQHFDQIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGIK----PETGGHVELLLLKNTKGDDWEVLAKPAKRLRVGAQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+++ + G ++ F GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVVEELDHGGRIVRFGYEGIFLE-VLESLGEMPLPPYIHEKLA----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V+ +DH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLEQIAAKGVKLVYLTLHVGLGTFRPVSVDSLEDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ GGR+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQILRQVKANGGRVIAVGTTSIRTLETIGSKFQGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY ++ VD +NFHLPKSTL+MLVSAF G T + Y+HAI+ YRF+S+GD +
Sbjct: 285 GYNWKIVDAFSTNFHLPKSTLVMLVSAFAGRSLTLEAYEHAIAERYRFFSFGDAMFI 341
>gi|327473324|gb|EGF18744.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK408]
Length = 342
Score = 477 bits (1227), Expect = e-132, Method: Composition-based stats.
Identities = 156/357 (43%), Positives = 213/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV SD + L DA+V
Sbjct: 1 MNTADFDFDLPEELIAQTPLEKRDASRLLVVDKETGA---FSDQHFDQIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGIK----PETGGHVELLLLKNIQGDDWEVLAKPAKRLRVGAQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+++ + G ++ F GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVVEELDHGGRIVRFGYEGIFLE-VLESLGEMPLPPYIHEKLA----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V+ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLEQISAKGVKLVYLTLHVGLGTFRPVSVDSLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK++GGR+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQILRQVKAKGGRVIAVGTTSIRTLETIGSKFQGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY ++ VD +NFHLPKSTL+MLVSAF G T + Y+HAI+ YRF+S+GD +
Sbjct: 285 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRSLTLEAYEHAIAERYRFFSFGDAMFI 341
>gi|325694040|gb|EGD35958.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK150]
Length = 342
Score = 477 bits (1227), Expect = e-132, Method: Composition-based stats.
Identities = 157/357 (43%), Positives = 211/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV V SD + L DA+V
Sbjct: 1 MNTADFDFDLPEELIAQTPLEKRDASRLLVVDKETG---VFSDQHFDQIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGIK----PETGGHVELLLLKNTQGDDWEVLAKPAKRLRVGSQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+++ + G ++ F GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVVEELDHGGRIVRFGYEGIFLE-VLESLGEMPLPPYIHEKLA----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ G+K+ ++TLHVG GTF PV V+ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLEQIADKGVKLVYLTLHVGLGTFRPVSVDSLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ GGR+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRQVKANGGRVIAVGTTSIRTLETIGSKFQGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY ++ VD +NFHLPKSTL+MLVSAF G T + Y+HAI+ YRF+S+GD +
Sbjct: 285 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRSLTLEAYEHAIAERYRFFSFGDAMFI 341
>gi|269797657|ref|YP_003311557.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Veillonella parvula DSM 2008]
gi|269094286|gb|ACZ24277.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Veillonella parvula DSM 2008]
Length = 341
Score = 477 bits (1227), Expect = e-132, Method: Composition-based stats.
Identities = 151/356 (42%), Positives = 206/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD++LP IA P+ PRD+ARL+ + DL L+ D +V
Sbjct: 1 MKVTDFDYELPEELIAQHPIEPRDTARLLTLDKVSGKVSHKEH--FYDLLEELHEGDVLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L G R ++ L N W +P K G ++ F
Sbjct: 59 FNNTKVIPARLYGHR----QGSGGKVEVLLLTPCGENRWECLVKPGKKCPVGQVIEF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
RL VIDK G ++ F+ +G+ + I +G +PLPPYI K D Y
Sbjct: 112 --DDRLRGIVIDKTEFGGRIIEFTCNGV-FDDVIQEIGEMPLPPYIHEK----LEDKDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT +LL ++ + G+++ FVTLHVG GTF PV E +DH M
Sbjct: 165 QTVYAKEKGSAAAPTAGLHFTPDLLEKIKAKGVELEFVTLHVGLGTFRPVSAETIEDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA +N+ K G RI++VGTTS+R LE+AT +DG++ SG+T IFI PG
Sbjct: 225 HSEFFVVSQETADRINAAKRNGRRIIAVGTTSVRTLESATNDDGVLQGMSGWTQIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STLLML+SA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YKFKMIDALVTNFHLPQSTLLMLISALAGREHCLAAYEEAVKERYRFFSFGDAMFI 340
>gi|327458690|gb|EGF05038.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK1057]
Length = 342
Score = 476 bits (1226), Expect = e-132, Method: Composition-based stats.
Identities = 158/357 (44%), Positives = 212/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV SD + L DA+V
Sbjct: 1 MNTADFDFDLPEELIAQTPLEKRDASRLLVVDKETGA---FSDQHFDQIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGIK----PETGGHVELLLLKNTQGDDWEVLAKPAKRLRVGAQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATVI++ G ++ FS GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVIEELEHGGRIVRFSYEGIFLE-VLESLGEMPLPPYIHEKLA----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V+ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLEQIAAKGVKLVYLTLHVGLGTFRPVSVDSLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK++GGR+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRQVKAKGGRVIAVGTTSIRTLETIGSKFQGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY ++ VD +NFHLPKSTL+MLVSAF G T + Y+HAI+ YRF+S+GD +
Sbjct: 285 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRSLTLEAYEHAIAERYRFFSFGDAMFI 341
>gi|319790693|ref|YP_004152326.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermovibrio ammonificans HB-1]
gi|317115195|gb|ADU97685.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermovibrio ammonificans HB-1]
Length = 343
Score = 476 bits (1226), Expect = e-132, Method: Composition-based stats.
Identities = 158/357 (44%), Positives = 205/357 (57%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD+ LP IA P PRDSARLMV+H + I + D+ +L D +V
Sbjct: 1 MKVSDFDYHLPKELIAKFPAEPRDSARLMVLHRDTG---EIEHRIFRDIVDYLVPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G ++ L +V P+ W V A+P+K +K G L F
Sbjct: 58 LNDTKVIPARLLGR-----LSTGAKVELLLLRQVEPDLWEVMAKPAKKLKTGKELVF--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSI-SGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ L TV G L+ F + G+ + VG +PLPPYI R+ + D
Sbjct: 110 --EGGLRGTVEGYAGEGRRLVRFRVPEGVSFMELLEQVGHVPLPPYIEREERPE--DRKL 165
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A G+VAAPTAGLHFT LL RL GI + VTLHVG GTF PVKVE+ + H
Sbjct: 166 YQTVFASRPGAVAAPTAGLHFTEELLERLRDKGIIIKTVTLHVGPGTFKPVKVEEVEKHQ 225
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
M E+ + TA +N K G RIV+VGTT +R LE+A EDG + G TN+FI P
Sbjct: 226 MDYEVYSVPQETALEVNRAKQEGRRIVAVGTTVVRTLESAAGEDGTVKAGEGSTNLFIYP 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GYRF+ VD L++NFHLP+STL+MLVSAF G E+ Y+ A+ YRFYSYGD +
Sbjct: 286 GYRFKVVDALVTNFHLPRSTLIMLVSAFAGREKVLNAYREAVKEGYRFYSYGDAMFI 342
>gi|325690109|gb|EGD32113.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK115]
Length = 343
Score = 476 bits (1225), Expect = e-132, Method: Composition-based stats.
Identities = 157/357 (43%), Positives = 211/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV SD + L DA+V
Sbjct: 2 MNTADFDFDLPEELIAQTPLEKRDASRLLVVDKETGA---FSDQHFDQIIDQLQPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + W V A+P+K ++ G + F
Sbjct: 59 MNNTRVLPARLYGIK----PETGGHVELLLLKNTQGDDWEVLAKPAKRLRVGAQISF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+++ + G ++ F GI LE + +G +PLPPYI K D Y
Sbjct: 112 -GDGRLTATVVEELDHGGRIVRFGYEGIFLE-VLESLGEMPLPPYIHEKLA----DRERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V+ DDH M
Sbjct: 166 QTVYAKENGSAAAPTAGLHFTEELLEQIAAKGVKLVYLTLHVGLGTFRPVSVDSLDDHEM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ GGR+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 226 HSEFYSLSEEAAQTLRQVKANGGRVIAVGTTSIRTLETIGSKFQGQIQADSGWTNIFIKP 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY ++ VD +NFHLPKSTL+MLVSAF G T K Y+HAI+ YRF+S+GD +
Sbjct: 286 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRSLTLKAYEHAIAERYRFFSFGDAMFI 342
>gi|212638559|ref|YP_002315079.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Anoxybacillus flavithermus WK1]
gi|212560039|gb|ACJ33094.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Anoxybacillus flavithermus WK1]
Length = 345
Score = 476 bits (1225), Expect = e-132, Method: Composition-based stats.
Identities = 152/358 (42%), Positives = 208/358 (58%), Gaps = 16/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ RD++RLMV+ V + + ++L D +V
Sbjct: 3 MKIDLFDFYLPEELIAQTPLPNRDASRLMVLDKQTGE--VTHESTFRSILSYLKEGDCLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + I L ++ + W +P+K +K G I+ F
Sbjct: 61 LNDTRVLPARLYGEK----EETGAHIEVLLLKQLDGDQWETLVKPAKRVKVGTIISF--- 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A + + G +L FS GI LE + +G +PLPPYI D Y
Sbjct: 114 -GDGRLRAECVAELEHGGRILSFSYDGIFLE-VLESLGEMPLPPYIK----AQLHDRERY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GS AAPTAGLHFT LL + G+ + F+TLHVG GTF PV VE+ ++H M
Sbjct: 168 QTVYAREAGSAAAPTAGLHFTEQLLEDVRKKGVHLAFITLHVGLGTFRPVNVENIEEHDM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TAQ LN VK++GGRI++VGTTS R LET A+ DG SG+T+IFI P
Sbjct: 228 HAEFYQMSEQTAQLLNDVKAQGGRIIAVGTTSTRTLETIASRHDGTFVAESGWTDIFIYP 287
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY FRA+D +++NFHLPKSTL+MLVSA G E + Y+ A+ YRF+S+GD L+
Sbjct: 288 GYTFRAIDGIITNFHLPKSTLIMLVSALAGREHVLRAYEEAVKERYRFFSFGDAMLII 345
>gi|328945507|gb|EGG39658.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK1087]
Length = 342
Score = 476 bits (1225), Expect = e-132, Method: Composition-based stats.
Identities = 156/357 (43%), Positives = 212/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV SD + L DA+V
Sbjct: 1 MNTADFDFDLPEELIAQTPLEKRDASRLLVVDKETGA---FSDQHFDQIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGIK----PETGGHVELLLLKNTQGDDWEVLAKPAKRLRVGAQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+++ + G ++ F+ GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVVEELDHGGRIVRFAYEGIFLE-VLESLGEMPLPPYIHEKLA----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V+ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLEQIAAKGVKLVYLTLHVGLGTFRPVSVDSLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ GGR+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRQVKANGGRVIAVGTTSIRTLETIGSKFQGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY ++ VD +NFHLPKSTL+MLVSAF G T + Y+HAI+ YRF+S+GD +
Sbjct: 285 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRSLTLEAYEHAIAERYRFFSFGDAMFI 341
>gi|163816609|ref|ZP_02207972.1| hypothetical protein COPEUT_02799 [Coprococcus eutactus ATCC 27759]
gi|158447866|gb|EDP24861.1| hypothetical protein COPEUT_02799 [Coprococcus eutactus ATCC 27759]
Length = 355
Score = 476 bits (1225), Expect = e-132, Method: Composition-based stats.
Identities = 148/365 (40%), Positives = 203/365 (55%), Gaps = 21/365 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F +DLP IA P+ R +RLMV+ I D+ +LN D +V
Sbjct: 2 MKLTDFYYDLPQELIAQDPLLKRSESRLMVLDRKD---NTIEHKHFYDVIDYLNPGDCLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L GV+ I L R +W +P K K G + F S+
Sbjct: 59 INDTRVLPARLMGVK----EDTGASIEVLLLKRKDDRTWETLVKPGKKCKVGARIVFGSE 114
Query: 121 DGQ---------SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRP 171
+ +L V+ G L+ F GI E + +G +PLPPYI K
Sbjct: 115 SNEPDPETGLIKGKLVGEVVGIVEEGNRLIRFEFDGI-FEEILDELGQMPLPPYITHK-- 171
Query: 172 IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK 231
D YQT YA+ GS AAPTAGLHFT+ LL ++ + GIK+ VTLHVG GTF PVK
Sbjct: 172 --LEDKNRYQTVYAEHDGSAAAPTAGLHFTTELLDQIKAKGIKIAHVTLHVGLGTFRPVK 229
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSG 291
E+ DH MHSE I+ A +N K+ GGR+VSVGTTS R LE+ + +DG ++ S
Sbjct: 230 EENILDHHMHSEFCIIEQDAADMINETKAAGGRVVSVGTTSTRTLESMSDDDGTVHAGSK 289
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
+T+IFI PGY+F+ +D L++NFHLP+STLLMLVSA E + Y+ A+ YRF+S+G
Sbjct: 290 WTDIFIYPGYKFKVIDALITNFHLPESTLLMLVSALYDREHILEAYKVAVEEKYRFFSFG 349
Query: 352 DTSLL 356
D L+
Sbjct: 350 DAMLI 354
>gi|313623657|gb|EFR93813.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
innocua FSL J1-023]
Length = 342
Score = 475 bits (1224), Expect = e-132, Method: Composition-based stats.
Identities = 157/357 (43%), Positives = 221/357 (61%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++LN DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKESG---EIKDQHFTDIISYLNKGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G++ + I L + N+W +P+K I+KG + F
Sbjct: 58 LNDTRVLPARLHGIK----DETGAHIEVLLLKQKEGNAWETLVKPAKRIRKGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+AT +++ G +L FS GI + +G +PLPPYI + D Y
Sbjct: 111 -GDGALKATCLEELEHGGRILEFSYEGI-FYEVLEQLGEMPLPPYIKEQLA----DQDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLAQISAKGVEIIFVTLHVGLGTFRPVDVEDTQNHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + +A +N +KS GG++V+VGTTS+R LET A+ DG + SG+T+IFI+P
Sbjct: 225 HSEFYRLTEESADRINKIKSAGGKVVAVGTTSIRTLETIASRHDGKLIAESGWTDIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+AVD L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD +
Sbjct: 285 GYKFQAVDALITNFHLPKSTLIMLVSALSDRTKILAAYNHAVEQQYRFFSFGDAMFI 341
>gi|291544961|emb|CBL18070.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Ruminococcus sp. 18P13]
Length = 341
Score = 475 bits (1224), Expect = e-132, Method: Composition-based stats.
Identities = 141/356 (39%), Positives = 196/356 (55%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ PR+ +RLMV+ +S +L L D +V
Sbjct: 1 MKKSDFYYDLPEELIAQTPIEPRNQSRLMVIDRETGA---VSHQHFYNLCDMLQEGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+++VI A+L G + I L + W + RP K K G F
Sbjct: 58 LNDSRVIPARLYGEKI----DNGTFIEFLLLEQKGDKLWELICRPGKKAKVGTRFSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL V++ G L+ F+ G + VG +PLPPYI K +D Y
Sbjct: 111 -GGGRLIGEVVEVKEDGNRLVQFTCEGNFF-TALEDVGQMPLPPYIKAK----LQDKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ GS AAPTAGLHFT +L +L G+++ +VTLHVG GTF PVK +D H M
Sbjct: 165 QTVYSRELGSAAAPTAGLHFTKEMLQQLQDKGVRLAYVTLHVGLGTFRPVKEDDVLQHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA +N K+ GGR++ VGTTS R +E+ T G I G+T+IFI PG
Sbjct: 225 HSEHYAMSQETADLINQTKAAGGRVICVGTTSCRTVESIATFFGKIQACEGYTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSAF G + T + Y+ A+ YRF+S+GD +
Sbjct: 285 YQFKVMDGLITNFHLPESTLIMLVSAFLGYDNTMRAYKTAVEEKYRFFSFGDACFI 340
>gi|261418396|ref|YP_003252078.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Geobacillus
sp. Y412MC61]
gi|319767645|ref|YP_004133146.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Geobacillus
sp. Y412MC52]
gi|261374853|gb|ACX77596.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Geobacillus
sp. Y412MC61]
gi|317112511|gb|ADU95003.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Geobacillus
sp. Y412MC52]
Length = 342
Score = 475 bits (1224), Expect = e-132, Method: Composition-based stats.
Identities = 147/358 (41%), Positives = 203/358 (56%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF LP IA P+ R ++RLMV+ I ++ ++LN D +V
Sbjct: 1 MKVDLFDFHLPEELIAQTPLPDRAASRLMVLDKRTGA---IRHETFRNIISYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L ++ + W +P K +K G L F
Sbjct: 58 LNDTRVMPARLYGEK----EETGGTVEVLLLKQLDGDRWETLVKPGKRVKPGTKLTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +LEA +D G +L FS G+ ++ +G +PLPPYI K D Y
Sbjct: 111 -GGGKLEAVCLDTLEHGGRVLEFSYDGL-FYEVLAELGEMPLPPYIKEKLD----DPERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GS AAPTAGLHFT LL + G+ + F+TLHVG GTF PV+V++ + H M
Sbjct: 165 QTVYAREIGSAAAPTAGLHFTEELLDAIREKGVHIVFITLHVGLGTFRPVQVDEVEKHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA+ LN V+ +GGRI++VGTTS R LET A +G SG+T+IFI P
Sbjct: 225 HAEFYQMSEETAETLNRVREQGGRIIAVGTTSTRTLETIAGKHNGRFVAESGWTDIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY F+ +D L++NFHLPKSTL+MLVSA G E YQ A+ YRF+S+GD L+
Sbjct: 285 GYEFKGIDGLVTNFHLPKSTLIMLVSALAGRENILHAYQVAVKERYRFFSFGDAMLII 342
>gi|222528286|ref|YP_002572168.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor bescii DSM 6725]
gi|222455133|gb|ACM59395.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Caldicellulosiruptor bescii DSM 6725]
Length = 346
Score = 475 bits (1224), Expect = e-132, Method: Composition-based stats.
Identities = 150/359 (41%), Positives = 208/359 (57%), Gaps = 18/359 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +F +DLP IA +PV PRDS+RLMV+ P+ I + D+ +LN D +V
Sbjct: 5 KLSDFHYDLPDELIAQKPVEPRDSSRLMVILPD----GRIEHRIFRDIVEYLNEGDCLVL 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NN+KVI A+L G R I L R+ N+W V RP K +KG F
Sbjct: 61 NNSKVIPARLIGQR----EETGSFIEFLLIKRLDINTWEVMTRPGKKARKGRRFVF---- 112
Query: 122 GQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A V+ G ++ F G+ E + +G IPLPPYI + D Y
Sbjct: 113 GNGELKAEVLHVNREEGTRVVRFYYDGV-FEEVLERLGKIPLPPYIKE----ELDDLSRY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K+ GS AAPTAGLHFT LLSR+ G+++ +VTLHVG GTF PVKVE+ ++H M
Sbjct: 168 QTVYSKVPGSAAAPTAGLHFTEELLSRISKKGVEILYVTLHVGLGTFKPVKVENVEEHKM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I + +N K G R+++VGTTS R+LE+ E+G + G+T+IFI PG
Sbjct: 228 HEEYYEISEDVTERINRAKELGKRVIAVGTTSCRVLESCCDENGKVKAKKGWTDIFIYPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
Y F+ +D L++NFHLP +TL+MLV AF G E Y+ A+ YRF+S+GD L+ ++
Sbjct: 288 YEFKVLDGLVTNFHLPDTTLMMLVCAFGGYERIMNAYKIAVDMRYRFFSFGDAMLILRR 346
>gi|46577020|sp|Q891Z9|QUEA_CLOTE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
Length = 341
Score = 475 bits (1223), Expect = e-132, Method: Composition-based stats.
Identities = 147/356 (41%), Positives = 201/356 (56%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M K+FD+ LP IA P+ RD RLMV+ + + D+ +LN D +V
Sbjct: 1 MKAKDFDYYLPEELIAQHPLEKRDECRLMVLDKETG---HVEHKVFKDILDYLNKGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + ++ L R ++W +P K K G F
Sbjct: 58 LNDTRVMPARLIGEK----EETKGKMEFLLLKRTDKDTWETLVKPGKRAKIGSRFIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
GQ L+A VI G ++ F GI E + +G +PLPPYI K D Y
Sbjct: 111 -GQGELKAEVIGMAEEGSRIVKFEYDGI-FEEVLDRLGQMPLPPYITEK----LEDKEKY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT LL+++ GIK+ F+TLHVG GTF PVK + ++HIM
Sbjct: 165 QTVYSKESGSAAAPTAGLHFTEELLNKIKEKGIKIVFLTLHVGLGTFRPVKEGEIENHIM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I TA +N+ K GGR+++VGTTS R LET ++ G I SG+TNIF+ PG
Sbjct: 225 HSEYYCISKETADIINTTKEAGGRVIAVGTTSCRTLETLGSKHGKIIEDSGWTNIFMYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+ D L++NFHLP+STL+MLVSA E Y+ A+ YRF+S+GD +
Sbjct: 285 YEFKVTDALITNFHLPQSTLIMLVSALSERERVLNAYEIAVREKYRFFSFGDAMFV 340
>gi|138896156|ref|YP_001126609.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Geobacillus
thermodenitrificans NG80-2]
gi|166216723|sp|A4IRB0|QUEA_GEOTN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|134267669|gb|ABO67864.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase [Geobacillus
thermodenitrificans NG80-2]
Length = 342
Score = 475 bits (1223), Expect = e-132, Method: Composition-based stats.
Identities = 147/358 (41%), Positives = 204/358 (56%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF LP IA P+ R ++RLMV+ I ++ ++L+ D +V
Sbjct: 1 MKVDLFDFHLPEELIAQTPLPDRAASRLMVLDKQTGA---IRHETFRNIISYLHPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L ++ + W +P K ++ G L F
Sbjct: 58 LNDTRVMPARLYGEKA----ETGGMVEVLLLKQLDGDRWETLVKPGKRVRPGTKLVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L+A +D G +L FS G+ + ++ +G +PLPPYI K Y
Sbjct: 111 -GGGKLQAVCLDTLEHGGRVLEFSYEGL-FYQVLAELGEMPLPPYIKEKLDN----PERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GS AAPTAGLHFT LL + GI + F+TLHVG GTF PV+V+D + H M
Sbjct: 165 QTVYAREIGSAAAPTAGLHFTEELLDAIREKGIHIAFITLHVGLGTFRPVQVDDIEKHNM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN V++ GGRI++VGTTS R LET A DG SG+T+IFI P
Sbjct: 225 HAEFYQMSEETAAILNRVRANGGRIIAVGTTSTRTLETIANRHDGRFAAESGWTDIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY F+A+D L++NFHLPKSTL+MLVSAF G E Y+ A+ YRF+S+GD L+
Sbjct: 285 GYEFKAIDGLVTNFHLPKSTLIMLVSAFAGREHILHAYEVAVKEQYRFFSFGDAMLII 342
>gi|28211815|ref|NP_782759.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
tetani E88]
gi|28204257|gb|AAO36696.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
tetani E88]
Length = 344
Score = 475 bits (1223), Expect = e-132, Method: Composition-based stats.
Identities = 147/356 (41%), Positives = 201/356 (56%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M K+FD+ LP IA P+ RD RLMV+ + + D+ +LN D +V
Sbjct: 4 MKAKDFDYYLPEELIAQHPLEKRDECRLMVLDKETG---HVEHKVFKDILDYLNKGDCLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + ++ L R ++W +P K K G F
Sbjct: 61 LNDTRVMPARLIGEK----EETKGKMEFLLLKRTDKDTWETLVKPGKRAKIGSRFIF--- 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
GQ L+A VI G ++ F GI E + +G +PLPPYI K D Y
Sbjct: 114 -GQGELKAEVIGMAEEGSRIVKFEYDGI-FEEVLDRLGQMPLPPYITEK----LEDKEKY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT LL+++ GIK+ F+TLHVG GTF PVK + ++HIM
Sbjct: 168 QTVYSKESGSAAAPTAGLHFTEELLNKIKEKGIKIVFLTLHVGLGTFRPVKEGEIENHIM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I TA +N+ K GGR+++VGTTS R LET ++ G I SG+TNIF+ PG
Sbjct: 228 HSEYYCISKETADIINTTKEAGGRVIAVGTTSCRTLETLGSKHGKIIEDSGWTNIFMYPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+ D L++NFHLP+STL+MLVSA E Y+ A+ YRF+S+GD +
Sbjct: 288 YEFKVTDALITNFHLPQSTLIMLVSALSERERVLNAYEIAVREKYRFFSFGDAMFV 343
>gi|157150443|ref|YP_001450865.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus gordonii str. Challis substr. CH1]
gi|157075237|gb|ABV09920.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus gordonii str. Challis substr. CH1]
Length = 342
Score = 475 bits (1223), Expect = e-132, Method: Composition-based stats.
Identities = 156/357 (43%), Positives = 210/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD++RL+VV + SD + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASRLLVVDRSSG---EFSDQHFDSIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLYGEK----PGTGGHVELLLLKNTEGDQWEVLAKPAKRLKVGAQVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+D+ G ++ F GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVVDELEHGGRIVRFDYQGIFLE-VLESLGEMPLPPYIHEKLA----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+++ + G+K+ ++TLHVG GTF PV V++ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTKELLAQIEAKGVKLVYLTLHVGLGTFRPVSVDNLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L VK+ G R+++VGTTS+R LET + G I SG+TNIFI P
Sbjct: 225 HSEFYTLSEEAAATLREVKANGHRVIAVGTTSIRTLETIGNKFKGDIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+++ VD +NFHLPKSTL+MLVSAF G + T K Y+HAI+ YRF+S+GD +
Sbjct: 285 GYQWQIVDAFSTNFHLPKSTLVMLVSAFAGRDLTLKAYEHAIAERYRFFSFGDAMFI 341
>gi|196250110|ref|ZP_03148804.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Geobacillus sp. G11MC16]
gi|196210294|gb|EDY05059.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Geobacillus sp. G11MC16]
Length = 342
Score = 475 bits (1222), Expect = e-132, Method: Composition-based stats.
Identities = 147/358 (41%), Positives = 204/358 (56%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF LP IA P+ R ++RLMV+ I ++ ++L+ D +V
Sbjct: 1 MKVDLFDFHLPEELIAQTPLPDRAASRLMVLDKQTGA---IRHETFRNIISYLHPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L ++ + W +P K ++ G L F
Sbjct: 58 LNDTRVMPARLYGEKA----ETGGMVEVLLLKQLDGDRWETLVKPGKRVRPGTKLVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L+A +D G +L FS G+ + ++ +G +PLPPYI K Y
Sbjct: 111 -GGGKLQAVCLDTLEHGGRVLEFSYEGL-FYQVLAELGEMPLPPYIKEKLDN----PERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GS AAPTAGLHFT LL + GI + F+TLHVG GTF PV+V+D + H M
Sbjct: 165 QTVYAREIGSAAAPTAGLHFTEELLDAIREKGIHIAFITLHVGLGTFRPVQVDDVEKHNM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN V++ GGRI++VGTTS R LET A DG SG+T+IFI P
Sbjct: 225 HAEFYQMSEETAAILNRVRANGGRIIAVGTTSTRTLETIANRHDGRFAAESGWTDIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY F+A+D L++NFHLPKSTL+MLVSAF G E Y+ A+ YRF+S+GD L+
Sbjct: 285 GYEFKAIDGLVTNFHLPKSTLIMLVSAFAGREHILHAYEVAVKEQYRFFSFGDAMLII 342
>gi|188586408|ref|YP_001917953.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Natranaerobius thermophilus JW/NM-WN-LF]
gi|229892797|sp|B2A5L1|QUEA_NATTJ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|179351095|gb|ACB85365.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Natranaerobius thermophilus JW/NM-WN-LF]
Length = 343
Score = 475 bits (1222), Expect = e-132, Method: Composition-based stats.
Identities = 147/356 (41%), Positives = 207/356 (58%), Gaps = 15/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EF+++LP IA +P+ R +RLMVV N S + + LP ++ D V
Sbjct: 1 MKLEEFNYELPEELIAQKPLANRSKSRLMVVSINSSD---VQHNHFEKLPQYVKDGDLFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN++VI A+L G + + E LH + W V +P K K G++ F
Sbjct: 58 INNSRVIPARLFGNKKQTGGKLE---MVLLHPLEGKDEWEVLVKPGKRAKPGNVFEF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
GQ LEA ++D G + F G ++ + +G +PLPPYI + D Y
Sbjct: 112 -GQETLEAEILDITPEGSRRVKFYYQG-NFQQVLDQLGQMPLPPYIKE----ELEDPERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GSVAAPTAGLHFT ++S + G +V +TLHVG GTF PV+ + ++H M
Sbjct: 166 QTVYAKESGSVAAPTAGLHFTPEIISDIKDQGGEVAELTLHVGLGTFRPVETPNIEEHEM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + TA+ +N K RG R+++VGTT +R LET T+DG++ P G+T+IFI PG
Sbjct: 226 HAEYYQLPEETAKKINQAKQRGNRVIAVGTTVVRTLETVKTDDGLVQPGKGWTDIFIYPG 285
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+ VD +++NFHLPKSTLLMLVSAF G + YQ AI YRF+S+GD +
Sbjct: 286 YEFKVVDAMLTNFHLPKSTLLMLVSAFAGKDLIMSAYQAAIEERYRFFSFGDAMFI 341
>gi|323352665|ref|ZP_08087635.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis VMC66]
gi|322121701|gb|EFX93447.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis VMC66]
Length = 342
Score = 475 bits (1222), Expect = e-132, Method: Composition-based stats.
Identities = 155/357 (43%), Positives = 210/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV SD + L DA+V
Sbjct: 1 MNTADFDFDLPEELIAQTPLEKRDASRLLVVDKETGA---FSDQHFDQIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGIK----PETGGHVELLLLKNTQGDDWEVLAKPAKRLRVGSQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+++ + G ++ F GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVVEELDHGGRIVRFGYEGIFLE-VLESLGEMPLPPYIHEKLA----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V+ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLEQIAAKGVKLVYLTLHVGLGTFRPVSVDSLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ G R+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRQVKANGDRVIAVGTTSIRTLETIGSKFQGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY ++ VD +NFHLPKSTL+MLVSAF G T + Y+HAI+ YRF+S+GD +
Sbjct: 285 GYDWKIVDAFSTNFHLPKSTLVMLVSAFAGRSLTLEAYEHAIAERYRFFSFGDAMFI 341
>gi|16800634|ref|NP_470902.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
innocua Clip11262]
gi|21263888|sp|Q92BI3|QUEA_LISIN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|16414053|emb|CAC96797.1| lin1566 [Listeria innocua Clip11262]
gi|313618792|gb|EFR90688.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
innocua FSL S4-378]
Length = 342
Score = 474 bits (1221), Expect = e-132, Method: Composition-based stats.
Identities = 157/357 (43%), Positives = 220/357 (61%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++LN DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKESG---EIKDQHFTDIISYLNKGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G++ + I L + N+W +P+K I+KG + F
Sbjct: 58 LNDTRVLPARLHGIK----DETGAHIEVLLLKQKEGNAWETLVKPAKRIRKGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+AT +++ G +L FS GI + +G +PLPPYI + D Y
Sbjct: 111 -GDGALKATCLEELEHGGRILEFSYEGI-FYEVLEQLGEMPLPPYIKEQLA----DQDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLAQISAKGVEIIFVTLHVGLGTFRPVDVEDTQNHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + +A +N +KS GG++V+VGTTS+R LET A+ DG + SG+T+IFI+P
Sbjct: 225 HSEFYRLTEESADRINKIKSAGGKVVAVGTTSIRTLETIASRHDGKLIAESGWTDIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+AVD L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD +
Sbjct: 285 GYEFQAVDALITNFHLPKSTLIMLVSALSDRTKILAAYNHAVEQQYRFFSFGDAMFI 341
>gi|294793309|ref|ZP_06758454.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Veillonella
sp. 6_1_27]
gi|294455740|gb|EFG24105.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Veillonella
sp. 6_1_27]
Length = 341
Score = 474 bits (1220), Expect = e-132, Method: Composition-based stats.
Identities = 151/356 (42%), Positives = 208/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD++LP IA PV PRD+ARL+ + DL L+ D +V
Sbjct: 1 MKVTDFDYELPEELIAQHPVEPRDTARLLTLDKVSGEVK--HKGHFYDLLEELHEGDVLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L G R ++ L N W +P K G ++ F
Sbjct: 59 FNNTKVIPARLYGHR----QGSGGKVEVLLLTPCGENRWECLVKPGKKCPVGQVIEF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
RL +IDK + G ++ F+ +G+ + I +G +PLPPYI K D Y
Sbjct: 112 --DDRLSGVIIDKTDFGGRIIQFTCNGV-FDDVIQEIGEMPLPPYIHEK----LEDKDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT +LL ++ + G+++ FVTLHVG GTF PV E +DH M
Sbjct: 165 QTVYAKEKGSAAAPTAGLHFTPDLLEKIKAKGVELEFVTLHVGLGTFRPVSAETIEDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA +N+ K +G RI++VGTTS+R LE+AT +DG++ SG+T IFI PG
Sbjct: 225 HSEFFVVSQDTADRINAAKQKGSRIIAVGTTSVRTLESATNDDGVLQGMSGWTQIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STLLML+SA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YKFKMIDALVTNFHLPQSTLLMLISALAGREHCLAAYEEAVRERYRFFSFGDAMFI 340
>gi|253574939|ref|ZP_04852279.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Paenibacillus sp. oral taxon 786 str. D14]
gi|251845985|gb|EES73993.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Paenibacillus sp. oral taxon 786 str. D14]
Length = 353
Score = 474 bits (1220), Expect = e-132, Method: Composition-based stats.
Identities = 149/359 (41%), Positives = 207/359 (57%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +DF+LP IA P+ R ++RL+ ++ I H SD+ +L D +V
Sbjct: 12 MNVDLYDFELPEELIAQTPLAERTASRLLTLNKQTG---EIRHHKFSDILDYLQPGDTLV 68
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G++ + L + + W +P K +K G ++ F +
Sbjct: 69 LNDTRVIPARLFGIK----EGTGAKAEVLLLKNLGEDRWEALVKPGKKLKTGSVIVFGDE 124
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L ATV + + GE +L F+ GI + +G +PLPPYI K D Y
Sbjct: 125 -----LRATVESEGDMGERVLRFAYEGI-FNEILDRLGQMPLPPYIKEKLD----DRERY 174
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL ++ + G+ + FVTLHVG GTF P+ V+ +DH+M
Sbjct: 175 QTVYSKHEGSAAAPTAGLHFTEELLEQVRAKGVTIAFVTLHVGLGTFRPMSVDRVEDHVM 234
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT--EDGIINPWSGFTNIFIT 298
H E + TA LN K+RGGR+++VGTTS R LET E G I SG+T IFI
Sbjct: 235 HEEYYVLPQETADVLNETKARGGRVIAVGTTSARTLETVAKQCEGGPIVKSSGWTGIFIY 294
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+F VD L++NFHLPKSTL+MLVSA G E + YQ AI+ YRF+S+GD ++
Sbjct: 295 PGYQFGLVDALLTNFHLPKSTLVMLVSALAGRERILQAYQEAINLKYRFFSFGDAMFIY 353
>gi|153955757|ref|YP_001396522.1| hypothetical protein CKL_3143 [Clostridium kluyveri DSM 555]
gi|219856124|ref|YP_002473246.1| hypothetical protein CKR_2781 [Clostridium kluyveri NBRC 12016]
gi|189038515|sp|A5N205|QUEA_CLOK5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|254764273|sp|B9E5Q7|QUEA_CLOK1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|146348615|gb|EDK35151.1| QueA [Clostridium kluyveri DSM 555]
gi|219569848|dbj|BAH07832.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 341
Score = 474 bits (1220), Expect = e-131, Method: Composition-based stats.
Identities = 150/356 (42%), Positives = 204/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDF LP IA +P+ RD RLMV+ + + D+ +LN D +V
Sbjct: 1 MEVTDFDFYLPEELIAQKPLEQRDEGRLMVLDKKTGK---VCHKIFKDIVYYLNPGDCVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L GVR +I L R +W +P + K G+ +F
Sbjct: 58 LNDTRVLPARLIGVR----EDTMGKIEFLLLKRRDNFTWETLVKPGRRAKVGNRFNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L+A V+ G ++ F +G+ E + +G IPLPPYI K Y
Sbjct: 111 -GSGQLKAEVVSINEDGNRIVRFEYNGV-FEEILDKLGQIPLPPYIKEKLEN----KELY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT LL L G+ + F+TLHVG GTF PVKVE+ +DH M
Sbjct: 165 QTVYSKEEGSAAAPTAGLHFTEELLRELREKGVNLAFLTLHVGLGTFRPVKVENIEDHAM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA +N+ K G ++SVGTTS R LET E+G + SG+T+IFI PG
Sbjct: 225 HSEFYSMSKETADMINAAKESGHSVISVGTTSCRTLETIGDENGRVKEQSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+++ VD L++NFHLPKSTL+MLVSAF G E T Y A+ YRF+S+GD +
Sbjct: 285 YKYKVVDKLITNFHLPKSTLIMLVSAFYGRENTLHAYNVAVKEKYRFFSFGDAMFI 340
>gi|196044952|ref|ZP_03112186.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus 03BB108]
gi|225866399|ref|YP_002751777.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus 03BB102]
gi|254764265|sp|C1ESW2|QUEA_BACC3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|196024440|gb|EDX63113.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus 03BB108]
gi|225787051|gb|ACO27268.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus 03BB102]
Length = 350
Score = 474 bits (1220), Expect = e-131, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 205/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI D Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKE----TLEDRDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVELAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT +G + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHNGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGDAMFI 341
>gi|228960691|ref|ZP_04122335.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar pakistani str. T13001]
gi|228798997|gb|EEM45970.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar pakistani str. T13001]
Length = 352
Score = 474 bits (1220), Expect = e-131, Method: Composition-based stats.
Identities = 150/357 (42%), Positives = 209/357 (58%), Gaps = 15/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEDRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI K ++ RD Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYI--KETLEDRDRYRY 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 167 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVQLAFITLHVGLGTFRPVSADTIEEHHM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 227 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 286
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 287 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGDAMFV 343
>gi|294795131|ref|ZP_06760265.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Veillonella
sp. 3_1_44]
gi|294453923|gb|EFG22298.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Veillonella
sp. 3_1_44]
Length = 341
Score = 473 bits (1219), Expect = e-131, Method: Composition-based stats.
Identities = 152/356 (42%), Positives = 208/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD++LP IA PV PRD+ARL+ + DL L+ D +V
Sbjct: 1 MKVTDFDYELPEELIAQHPVEPRDTARLLTLDKVSGEVK--HKGHFYDLLEELHEGDVLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L G R ++ L N W +P K G ++ F
Sbjct: 59 FNNTKVIPARLYGHR----QGSGGKVEVLLLTPCGENRWECLVKPGKKCPIGQVIEF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
RL +IDK N G ++ F+ +G+ + I +G +PLPPYI K D Y
Sbjct: 112 --DDRLSGVIIDKTNFGGRIIQFTCNGV-FDDVIQEIGEMPLPPYIHEK----LEDKDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT +LL ++ + G+++ FVTLHVG GTF PV E +DH M
Sbjct: 165 QTVYAKEKGSAAAPTAGLHFTPDLLEKIKAKGVELEFVTLHVGLGTFRPVSAETIEDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA +N+ K +G RI++VGTTS+R LE+AT +DG++ SG+T IFI PG
Sbjct: 225 HSEFFVVPQDTANRINAAKQKGSRIIAVGTTSVRTLESATNDDGVLQGMSGWTQIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STLLML+SA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YKFKMIDALVTNFHLPQSTLLMLISALAGREHCLAAYEEAVRERYRFFSFGDAMFI 340
>gi|160880412|ref|YP_001559380.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Clostridium phytofermentans ISDg]
gi|189038516|sp|A9KK69|QUEA_CLOPH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|160429078|gb|ABX42641.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Clostridium phytofermentans ISDg]
Length = 364
Score = 473 bits (1219), Expect = e-131, Method: Composition-based stats.
Identities = 148/366 (40%), Positives = 202/366 (55%), Gaps = 21/366 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F FDLP IA P+ R +RL+V+ N ++ H+ ++ +L D +V
Sbjct: 1 MKKQDFYFDLPEELIAQDPLEDRSGSRLLVLDKNTGK---VTHHIFKEIVKYLKKGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHI---------NRREKEISCTLHMRVSPNSWSVYARPSKVIKK 111
NNTKVI A+L G R + I L R + W RP K K
Sbjct: 58 LNNTKVIPARLMGERIIEKTPLAPGHSYGKEGTPIELLLLKRKPDDVWETLVRPGKKAKV 117
Query: 112 GDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRP 171
G + F G +L +ID G L+ F+ GI E + +G +PLPPYI
Sbjct: 118 GTKISF----GDGKLIGEIIDVVEEGNRLVKFTYQGI-FEEILDELGQMPLPPYITH--- 169
Query: 172 IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK 231
+ D YQT YAK +GS AAPTAGLHFT+ LL ++ +G+ + VTLHVG GTF PVK
Sbjct: 170 -ELADKNRYQTVYAKHEGSAAAPTAGLHFTNELLKQIEDMGVVIANVTLHVGLGTFRPVK 228
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSG 291
+D DH MHSE+ ++ A+ +N K GGRI+ VGTTS R +E+A EDG + SG
Sbjct: 229 EDDILDHHMHSEVYQVEESEAKKINDAKRAGGRIICVGTTSCRTIESAANEDGFVQAKSG 288
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T IFI PGY+F+ ++ L++NFHLP+STLLMLVSA E Y+ A+ YRF+S+G
Sbjct: 289 ATEIFIYPGYKFKVLNCLITNFHLPESTLLMLVSALASREHIIAAYEEAVKERYRFFSFG 348
Query: 352 DTSLLF 357
D +
Sbjct: 349 DAMFIT 354
>gi|324990584|gb|EGC22520.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK353]
Length = 342
Score = 473 bits (1219), Expect = e-131, Method: Composition-based stats.
Identities = 157/357 (43%), Positives = 210/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV SD + L DA+V
Sbjct: 1 MNTADFDFDLPEELIAQTPLEKRDASRLLVVDKETGA---FSDQHFDQIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGIK----PETGGHVELLLLKNTQGDDWEVLAKPAKRLRVGSHISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+++ + G ++ F GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVVEELDHGGRIVRFGYEGIFLE-VLESLGEMPLPPYIHEKLA----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLEQIAAKGVKLVYLTLHVGLGTFRPVSVNSLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ GGR+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRQVKANGGRVIAVGTTSIRTLETIGSKFQGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY ++ VD +NFHLPKSTL+MLVSAF G T K Y+HAI+ YRF+S+GD +
Sbjct: 285 GYDWKIVDAFSTNFHLPKSTLVMLVSAFAGRSLTLKAYEHAIAERYRFFSFGDAMFI 341
>gi|152976836|ref|YP_001376353.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus subsp. cytotoxis NVH 391-98]
gi|189038510|sp|A7GTA0|QUEA_BACCN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|152025588|gb|ABS23358.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Bacillus
cytotoxicus NVH 391-98]
Length = 350
Score = 473 bits (1219), Expect = e-131, Method: Composition-based stats.
Identities = 155/357 (43%), Positives = 208/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I SD+ A+L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQTPLEKRETSRLMVLDRETGD---IEHKHFSDILAYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + ++W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDTWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + + G L FS GI + +G +PLPPYI D Y
Sbjct: 111 -GEGKLKATCVGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKE----TLEDRDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+K+ F+TLHVG GTF PV + +DH M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLQQKGVKLAFITLHVGLGTFRPVSTDKIEDHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET TE DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSQETADLLNDVKVNGGRIITVGTTSTRTLETIATEHDGKLCGASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF G E Y A+ YRF+S+GD L
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFAGRENVLHAYNEAVKEKYRFFSFGDAMFL 341
>gi|324993331|gb|EGC25251.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK405]
Length = 342
Score = 473 bits (1218), Expect = e-131, Method: Composition-based stats.
Identities = 155/357 (43%), Positives = 209/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV SD + L DA+V
Sbjct: 1 MNTADFDFDLPEELIAQAPLEKRDASRLLVVDKETGA---FSDQHFDQIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGIK----PETGGHVELLLLKNIQDDDWEVLAKPAKRLRVGAQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+D+ G ++ F GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVVDELEHGGRIVRFGYEGIFLE-VLESLGEMPLPPYIHEKLA----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+ + ++TLHVG GTF PV V+ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLEQIAAKGVNLVYLTLHVGLGTFRPVSVDSLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L VK+ GGR+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAHTLRQVKANGGRVIAVGTTSIRTLETIGSKFQGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY ++ VD +NFHLPKSTL+MLVSAF G T + Y+HAI+ YRF+S+GD +
Sbjct: 285 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRSLTLEAYEHAIAERYRFFSFGDAMFI 341
>gi|331003020|ref|ZP_08326532.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lachnospiraceae oral taxon 107 str. F0167]
gi|330413064|gb|EGG92439.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lachnospiraceae oral taxon 107 str. F0167]
Length = 341
Score = 473 bits (1218), Expect = e-131, Method: Composition-based stats.
Identities = 156/356 (43%), Positives = 206/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VKEF +DLP IA P+ R S+RL+V+ IS D+ +LN D +V
Sbjct: 1 MDVKEFWYDLPQELIAQDPLEDRASSRLLVLDKKNG---EISHKHFYDIIDYLNEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKVI A+L GV+ N I L R + SW +P K K G + F
Sbjct: 58 LNETKVIPARLMGVK----NDTGAAIEILLLKRKTKTSWECLVKPGKKCKVGAKIDF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L T++D G ++ F GI E + +GT+PLPPYI +D Y
Sbjct: 111 -GEGLLTGTIMDIVEEGNRIIEFEFEGIF-EEILDKLGTMPLPPYITHA----LKDRNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ GI++ VTLHVG GTF PVKV D ++H M
Sbjct: 165 QTVYAKNEGSAAAPTAGLHFTKELLEKIEKKGIRLAKVTLHVGLGTFRPVKVNDINEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I + A +NS K G R+V VGTTS R +E+A E+G + SG+T+IFI PG
Sbjct: 225 HSEFFNISSEAADIINSTKKNGKRVVCVGTTSTRTIESAADENGYLEEKSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STL+MLVSA G E Y+ A+ YRF+S+GD L+
Sbjct: 285 YKFKVLDALITNFHLPESTLVMLVSALAGRENILHAYEEAVKEKYRFFSFGDAMLI 340
>gi|15613790|ref|NP_242093.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
halodurans C-125]
gi|20139775|sp|Q9KDI6|QUEA_BACHD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|10173843|dbj|BAB04946.1| S-adenosylmethionine tRNA ribosyltransferase [Bacillus halodurans
C-125]
Length = 347
Score = 473 bits (1218), Expect = e-131, Method: Composition-based stats.
Identities = 150/360 (41%), Positives = 212/360 (58%), Gaps = 16/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDF LP IA P+ R ++RL+V+ + + D DL F+ + D +V
Sbjct: 1 MNVRDFDFHLPEKLIAQTPLKDRTASRLLVLDKHTGA---VEDKKFPDLLQFIEAGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L GV+ ++ L ++ + W +P+K +K G I+ F
Sbjct: 58 LNDTRVLPARLFGVK----EETGAQVEVLLLKQMEGDRWETLVKPAKRLKVGTIIRF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L AT + + G +L FS GI + +G +PLPPYI + D Y
Sbjct: 111 -GNGELTATCVQELEHGGRVLEFSYEGI-FHEVLDQLGEMPLPPYIKEQLD----DKDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +AK +GS AAPTAGLHFT LL +L G+ + F+TLHVG GTF PV VE+ ++H M
Sbjct: 165 QTVFAKNRGSAAAPTAGLHFTEELLDQLKQKGVHLAFITLHVGLGTFRPVSVEEIEEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + A TA+ LN VK +GGRI++VGTTS R LET E SG+T+IFI PG
Sbjct: 225 HAEFYQMSAGTARLLNEVKRQGGRIIAVGTTSARTLETIRQEHDEFVETSGWTSIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
Y F+ +D L++NFHLPKSTL+MLVSA G E Y HA+ +YRF+S+GD ++ K+
Sbjct: 285 YEFKGIDGLITNFHLPKSTLVMLVSALAGRENLLNAYAHAVKQSYRFFSFGDAMFIYDKK 344
>gi|320528956|ref|ZP_08030048.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Selenomonas
artemidis F0399]
gi|320138586|gb|EFW30476.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Selenomonas
artemidis F0399]
Length = 346
Score = 473 bits (1218), Expect = e-131, Method: Composition-based stats.
Identities = 150/360 (41%), Positives = 210/360 (58%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+DLP RIA P+ PRD++RLMV+ P I +L L D ++
Sbjct: 1 MDISDFDYDLPEERIAQTPLEPRDASRLMVLDP---AEQTIEHRHFYELDVLLQPGDVLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G R ++ ++ L ++ + W +P K + GD + F +
Sbjct: 58 FNDTRVIPARLIGAR----DKTGAKVEVLLLRQIDRDRWEALVKPGKKARIGDRIRFGEE 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L +I + G ++ F GI E + +G +PLPPYI K D Y
Sbjct: 114 -----LSCGIISHTDFGGRIVKFIYQGI-FEEILDRLGEMPLPPYIREK----LSDADRY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ +GS AAPTAGLHFT LL RL G+ FVTLHVG GTF PV+ + ++H+M
Sbjct: 164 QTIYSRERGSAAAPTAGLHFTEELLVRLKEKGVIFGFVTLHVGLGTFRPVQEQTIENHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I TAQ + K+ G RIV+VGTTS+R LE+A E G I P SG+T+IFI PG
Sbjct: 224 HREYYAIPEETAQIIRRAKAEGRRIVAVGTTSIRTLESAAGETGEIRPTSGWTDIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRF+ VD +++NFHLPKSTL+ML+SAF G Y+ A+ YRF+S+GD L+ ++
Sbjct: 284 YRFKVVDAIITNFHLPKSTLIMLISAFAGRSFILNAYKQAVDEGYRFFSFGDAMLIQGRK 343
>gi|325295633|ref|YP_004282147.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase
[Desulfurobacterium thermolithotrophum DSM 11699]
gi|325066081|gb|ADY74088.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase
[Desulfurobacterium thermolithotrophum DSM 11699]
Length = 343
Score = 473 bits (1217), Expect = e-131, Method: Composition-based stats.
Identities = 154/358 (43%), Positives = 211/358 (58%), Gaps = 16/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD+ LP IA PV PRDS+RLMV++ N I + D+ +L + D +V
Sbjct: 1 MKVSDFDYKLPKELIAKFPVEPRDSSRLMVLNKNTGK---IEHRIFKDIVEYLKAGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G ++ L + N+W V A+P++ +KKG + F
Sbjct: 58 INDTKVIPARLFGK-----LDTGGKVEILLVRQPGLNTWEVMAKPARKLKKGRKISF--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSI-SGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
LEA V + G+ ++ F I S + +I +G IPLPPYI R+ + D
Sbjct: 110 --DEELEAVVKEYSGEGKRIIEFVIKSNKDFMEKIEEIGHIPLPPYIEREEKPE--DREK 165
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A+ +G+VAAPTAGLHFT+ LL L S GI + +TLHVG GTF PVKVE+ +DH
Sbjct: 166 YQTVFARKEGAVAAPTAGLHFTTELLENLKSKGIIIKNITLHVGPGTFKPVKVENVEDHQ 225
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
M E ++ TA +N K G R+++VGTT R LE+A E G + TN+FI P
Sbjct: 226 MDYETYYVPEDTAIEINRAKEEGRRVIAVGTTVTRTLESAADESGKVKQGEDSTNLFIYP 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY+F+ +D L++NFHLP+STLLMLVSAF G E Y+ A+ YRFYSYGD +F
Sbjct: 286 GYKFKVIDALITNFHLPRSTLLMLVSAFAGKERILNAYKEAVRKGYRFYSYGDAMFIF 343
>gi|324995358|gb|EGC27270.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK678]
Length = 342
Score = 473 bits (1217), Expect = e-131, Method: Composition-based stats.
Identities = 156/357 (43%), Positives = 210/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV SD + L DA+V
Sbjct: 1 MNTADFDFDLPEELIAQTPLEKRDASRLLVVDKETGA---FSDQHFDQIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGIK----PETGGHVELLLLKNTKGDDWEVLAKPAKRLRVGAQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+++ + G ++ F GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVVEELDHGGRIVRFGYEGIFLE-VLESLGEMPLPPYIHEKLA----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V+ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLEQIAAKGVKLVYLTLHVGLGTFRPVSVDSLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK GGR+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRQVKVNGGRVIAVGTTSIRTLETIGSKFQGQIQADSGWTNIFIRP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY ++ VD +NFHLPKSTL+MLVSAF G T + Y+HAI+ YRF+S+GD +
Sbjct: 285 GYNWKIVDAFSTNFHLPKSTLVMLVSAFAGRSLTLEAYEHAIAERYRFFSFGDAMFI 341
>gi|16803571|ref|NP_465056.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes EGD-e]
gi|47097028|ref|ZP_00234601.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes str. 1/2a F6854]
gi|224499808|ref|ZP_03668157.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes Finland 1988]
gi|224501529|ref|ZP_03669836.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL R2-561]
gi|254828235|ref|ZP_05232922.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL N3-165]
gi|254829710|ref|ZP_05234365.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes 10403S]
gi|254898303|ref|ZP_05258227.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes J0161]
gi|254912205|ref|ZP_05262217.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes J2818]
gi|254936533|ref|ZP_05268230.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes F6900]
gi|21263872|sp|Q8Y6Z9|QUEA_LISMO RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|16410960|emb|CAC99609.1| lmo1531 [Listeria monocytogenes EGD-e]
gi|47014610|gb|EAL05570.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes str. 1/2a F6854]
gi|258600623|gb|EEW13948.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL N3-165]
gi|258609127|gb|EEW21735.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes F6900]
gi|293590178|gb|EFF98512.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes J2818]
Length = 342
Score = 473 bits (1217), Expect = e-131, Method: Composition-based stats.
Identities = 156/357 (43%), Positives = 221/357 (61%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++LN DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKESGD---IKDQHFTDIISYLNEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G++ + I L + N+W +P+K I+KG + F
Sbjct: 58 LNDTRVLPARLHGIK----DETGAHIEVLLLKQKEGNAWETLVKPAKRIRKGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+AT +++ G +L FS GI + +G +PLPPYI + D Y
Sbjct: 111 -GDGALKATCLEELEHGGRILEFSYEGI-FYEVLEQLGEMPLPPYIKEQLA----DQDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL ++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEDLLEQISAKGVEIIFVTLHVGLGTFRPVDVEDTTNHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + +A+ +N +K++GG++V+VGTTS+R LET A+ DG + SG+T IFI+P
Sbjct: 225 HSEFYRLTEESAERINKIKAQGGKVVAVGTTSIRTLETIASRHDGKLVAESGWTEIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+AVD L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD +
Sbjct: 285 GYTFQAVDALITNFHLPKSTLIMLVSALSDRTKILAAYNHAVEEQYRFFSFGDAMFI 341
>gi|149183133|ref|ZP_01861583.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
sp. SG-1]
gi|148849165|gb|EDL63365.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
sp. SG-1]
Length = 342
Score = 473 bits (1217), Expect = e-131, Method: Composition-based stats.
Identities = 149/358 (41%), Positives = 205/358 (57%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDF LP IA P+ R +RLM + + D+ FL D +V
Sbjct: 1 MKVEDFDFHLPEELIAQTPLEKRSESRLMAIDRESGN---LQHKKFKDITDFLKEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L GV+ +I L + + W +P+K +K G + F
Sbjct: 58 LNDTRVLPARLFGVK----EETGAKIEVLLLKQEEGDKWETLIKPAKRVKVGTKISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L A + + G +L F GI + +G +PLPPYI+ K D Y
Sbjct: 111 -GEGKLTALCTGEKDQGGRILEFHYEGI-FYEVLDELGEMPLPPYISEKLD----DQDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +GS AAPTAGLHFT LL + S G+ V F+TLHVG GTF PV V+ ++H M
Sbjct: 165 QTVFARERGSAAAPTAGLHFTEELLDEIRSRGVHVAFITLHVGLGTFRPVSVDSIEEHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE I TA+ LN VK GGRI++VGTTS R LET A+ DG SG+T+IFI P
Sbjct: 225 HSEFYQITEGTARLLNEVKESGGRIITVGTTSTRTLETIASKHDGKFVEESGWTDIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY F+A+D L++NFHLPKSTL+MLVSAF + Y+ A+ YRF+S+GD+ L+
Sbjct: 285 GYEFKAIDGLVTNFHLPKSTLIMLVSAFTSRDIILNAYKTAVEEKYRFFSFGDSMLIL 342
>gi|257066399|ref|YP_003152655.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Anaerococcus prevotii DSM 20548]
gi|256798279|gb|ACV28934.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Anaerococcus prevotii DSM 20548]
Length = 340
Score = 472 bits (1216), Expect = e-131, Method: Composition-based stats.
Identities = 146/356 (41%), Positives = 206/356 (57%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +EFD++LP S IA P RD AR+M++ + I D D+ +L D +V
Sbjct: 1 MRTEEFDYELPESLIAQHPSDKRDEARMMLLDKSTGD---IEDKHFFDIIDYLKPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G R +++ I L + W V RP K +K G + F +
Sbjct: 58 MNDTRVIPARLFGHR----EGKDESIEVFLLHNIKGKKWEVLVRPGKKMKIGVEVIFSDE 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L+A VID G ++ F+ GI + +G +PLPPYI K +D +Y
Sbjct: 114 -----LKAKVIDIKEDGNRVVEFTYEGI-FNEILDKLGNMPLPPYIKEK----LKDPEEY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GSVAAPTAGLHFT LL ++ GIK+ F+TL+VG GTF PV +D DH M
Sbjct: 164 QTVYSKNPGSVAAPTAGLHFTKELLKKIEEKGIKLAFLTLNVGLGTFRPVNEDDITDHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I TA +N K G R+++VGTTS+R LE+ + G I SG+T+IFI PG
Sbjct: 224 HSEFYTISQETADIINQAKREGNRVIAVGTTSIRTLESVYKKCGKIQEDSGWTDIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ ++ VD +++NFHLPKSTL+MLV+AF + Y++A+ YRF+S+GD +
Sbjct: 284 FEYKVVDAIITNFHLPKSTLIMLVAAFTSKKIILNAYEYAVKEKYRFFSFGDCMFI 339
>gi|327461604|gb|EGF07935.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK1]
gi|327489463|gb|EGF21256.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK1058]
Length = 342
Score = 472 bits (1216), Expect = e-131, Method: Composition-based stats.
Identities = 157/357 (43%), Positives = 210/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV SD + L DA+V
Sbjct: 1 MNTADFDFDLPEELIAQTPLEKRDASRLLVVDKETGA---FSDQHFDQIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGIK----PETGGHVELLLLKNTQGDDWEVLAKPAKRLRVGAQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATVI++ G ++ F+ GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVIEELEHGGRIVRFAYEGIFLE-VLESLGEMPLPPYIHEKLA----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V+ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLEQIAAKGVKLVYLTLHVGLGTFRPVSVDSLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK GGR+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRQVKGNGGRVIAVGTTSIRTLETIGSKFQGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY ++ VD +NFHLPKSTL+MLVSAF G T + Y+HAI+ YRF+S+GD +
Sbjct: 285 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRSLTLEAYEHAIAEHYRFFSFGDAMFI 341
>gi|229829378|ref|ZP_04455447.1| hypothetical protein GCWU000342_01467 [Shuttleworthia satelles DSM
14600]
gi|229792541|gb|EEP28655.1| hypothetical protein GCWU000342_01467 [Shuttleworthia satelles DSM
14600]
Length = 345
Score = 472 bits (1216), Expect = e-131, Method: Composition-based stats.
Identities = 143/360 (39%), Positives = 202/360 (56%), Gaps = 16/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FD++LP IA P+ RD +RL+V+ P + D+ +L + D +V
Sbjct: 1 MDVKDFDYELPEELIAQDPLLKRDQSRLLVLDPETGA---MEHRHFYDIRDYLRAGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G + ++ L + ++W +P + ++G + F
Sbjct: 58 INNTRVIPARLLGAK----EETGAKVEVLLLINHGGDNWETLVKPGRKCREGARISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L V G ++ FS GI E + +G +PLPPYI + D Y
Sbjct: 111 -GEGLLVGQVTKVLEDGNRMIHFSYQGI-WEEVLDRLGQMPLPPYIHHQLA----DKNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + G+++ VTLHVG GTF PVK + +DH M
Sbjct: 165 QTVYAKHDGSAAAPTAGLHFTPELLEEIRKSGVEIAEVTLHVGLGTFRPVKADRVEDHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +N ++ GGRI++VGTTS R LE+ DG I SG+T IFI PG
Sbjct: 225 HSEYYVVGQEAADTINRARANGGRIIAVGTTSTRTLESVAEADGTIPVKSGWTKIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
Y+F+A+D L++NFHLP+STLLMLVSA G + K Y+ A+ YRF+S+GD + +
Sbjct: 285 YQFKAIDGLITNFHLPQSTLLMLVSALAGRDHILKAYREAVEEKYRFFSFGDAMFIKPRE 344
>gi|118479574|ref|YP_896725.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis str. Al Hakam]
gi|118418799|gb|ABK87218.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis str. Al Hakam]
Length = 354
Score = 472 bits (1216), Expect = e-131, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 205/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 5 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 62 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI D Y
Sbjct: 115 -GEGKLKATCTGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKE----TLEDRDRY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 169 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVELAFITLHVGLGTFRPVSADTIEEHHM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT +G + SG+T+IF+ P
Sbjct: 229 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHNGKLCAASGWTDIFMYP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 289 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGDAMFV 345
>gi|159184871|ref|NP_354665.2| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Agrobacterium tumefaciens str. C58]
gi|22096020|sp|Q8UES7|QUEA_AGRT5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|159140152|gb|AAK87450.2| S-adenosylmethionine tRNA ribosyltransferase-isomerase
[Agrobacterium tumefaciens str. C58]
Length = 366
Score = 472 bits (1216), Expect = e-131, Method: Composition-based stats.
Identities = 223/369 (60%), Positives = 262/369 (71%), Gaps = 14/369 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP IALRP PRDSARL+VV PN + DH V DLP+FL DA+V
Sbjct: 1 MRVDLFDFDLPEENIALRPANPRDSARLLVVDPN---ENRMEDHRVFDLPSFLRPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI AQL GVR E +S TLHMR + W +ARP K IK+GD + F
Sbjct: 58 FNDTRVIPAQLEGVRLREGAP-ETAVSATLHMRADQSRWKAFARPGKRIKEGDRIRFGYD 116
Query: 121 D----------GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKR 170
G + LEATV +K GEI L+F ISG L+ I+ VG IPLPPYIA KR
Sbjct: 117 RDTVNSSSGACGLAHLEATVEEKGEEGEITLLFDISGPVLDEAIASVGHIPLPPYIAAKR 176
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
P D +D DYQT YA+ +G+VAAPTAGLHFT +L L S GI+ +FVTLHVGAGTF+PV
Sbjct: 177 PEDQQDQTDYQTIYAREKGAVAAPTAGLHFTPDLFEALDSAGIERHFVTLHVGAGTFLPV 236
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWS 290
K +DTDDH MH EIG++ TA LN+VK+RGGRIV VGTTSLRL+E+A TEDG I+PWS
Sbjct: 237 KSDDTDDHKMHFEIGYVSQETADRLNAVKARGGRIVCVGTTSLRLIESAATEDGTIHPWS 296
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
T IFITPGYRFRAVD+LM+NFHLPKSTL MLVSAFCG+E + Y+HAI YRFYSY
Sbjct: 297 DATGIFITPGYRFRAVDMLMTNFHLPKSTLFMLVSAFCGLETMRDAYRHAIETGYRFYSY 356
Query: 351 GDTSLLFQK 359
GD+SLLF+K
Sbjct: 357 GDSSLLFRK 365
>gi|262283157|ref|ZP_06060924.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sp. 2_1_36FAA]
gi|262261409|gb|EEY80108.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sp. 2_1_36FAA]
Length = 342
Score = 472 bits (1216), Expect = e-131, Method: Composition-based stats.
Identities = 154/357 (43%), Positives = 211/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD++RL++V + SD + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASRLLIVDRSSG---EFSDQHFDSIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + + W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLYGEK----PGTGGHVELLLLKNIEGDHWEVLAKPAKRLKVGAQVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+++ G ++ F GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVVEELEHGGRIVRFDYQGIFLE-VLESLGEMPLPPYIHEKLA----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+++ + G+K+ ++TLHVG GTF PV V++ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTKELLAQIEAKGVKLVYLTLHVGLGTFRPVSVDNLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L VK+ G R+++VGTTS+R LET + G I SG+TNIFI P
Sbjct: 225 HSEFYTLSEEAAATLREVKANGHRVIAVGTTSIRTLETIGNKFQGDIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+++ VD +NFHLPKSTL+MLVSAF G + T K Y+HAI+ YRF+S+GD +
Sbjct: 285 GYQWQIVDAFSTNFHLPKSTLVMLVSAFAGRDLTLKAYEHAIAERYRFFSFGDAMFI 341
>gi|222085994|ref|YP_002544526.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Agrobacterium radiobacter K84]
gi|254764260|sp|B9JFA8|QUEA_AGRRK RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|221723442|gb|ACM26598.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Agrobacterium radiobacter K84]
Length = 360
Score = 472 bits (1216), Expect = e-131, Method: Composition-based stats.
Identities = 213/362 (58%), Positives = 261/362 (72%), Gaps = 6/362 (1%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRP PRDSARL+VV PN +V+SD + DL ++L DAIV
Sbjct: 1 MRVDLFDFDLPDERIALRPAEPRDSARLLVVDPN--AEMVLSDRQIRDLSSYLRPGDAIV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R +++S TLHMR +P+ W +A+P K IK GD + F
Sbjct: 59 FNDTKVIPAQLEGIRHREGAP-GQQVSATLHMRAAPDRWKAFAKPGKRIKIGDRIQFGHG 117
Query: 121 D---GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+ L+A V +K GEI L F +SG L+ I+ VG IPLPPYIA KRP D RD
Sbjct: 118 ENVCALGALDAVVEEKGEGGEITLRFDLSGPALDEAIAAVGHIPLPPYIAAKRPEDERDR 177
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YA+ +G+VAAPTAGLHFT +L + L ++G++ +FVTLHVGAGTF+PVK +DT+D
Sbjct: 178 ADYQTIYAREEGAVAAPTAGLHFTPSLFATLDAMGVERHFVTLHVGAGTFLPVKADDTED 237
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH EIG +DA TA+ LN+VK+RGGRIV VGTTSLRLLE+A EDG I PWSG T IFI
Sbjct: 238 HKMHFEIGHVDAATAEKLNAVKARGGRIVCVGTTSLRLLESAAAEDGTIKPWSGATGIFI 297
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRF+ VD+LM+NFHLP+STL MLVSAF G++ + Y HAI YRFYSYGD SLL
Sbjct: 298 TPGYRFKTVDLLMTNFHLPRSTLFMLVSAFAGLDTMRAAYTHAIETGYRFYSYGDGSLLH 357
Query: 358 QK 359
+K
Sbjct: 358 RK 359
>gi|300813231|ref|ZP_07093599.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Peptoniphilus sp. oral taxon 836 str. F0141]
gi|300512684|gb|EFK39816.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Peptoniphilus sp. oral taxon 836 str. F0141]
Length = 339
Score = 472 bits (1216), Expect = e-131, Method: Composition-based stats.
Identities = 146/357 (40%), Positives = 203/357 (56%), Gaps = 18/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P RD +RLM+++ I+ ++ +LN+ D +V
Sbjct: 1 MKTSDFSYDLPSELIAQHPAQKRDQSRLMLLNKKTG---EINHKKFYNIIDYLNNGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A++ G R +++ I L ++W A+P K +K G + F +
Sbjct: 58 LNDTRVMPARIFGHR----PEKDESIEILLL-NHKGDTWETLAKPGKKLKIGTEIIFSDE 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L+A V+D G L F SGI E + +G +PLPPYI K D Y
Sbjct: 113 -----LKAEVVDISEDGSRFLKFIYSGI-FEEILDRLGEMPLPPYIQEK----LEDKERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT LL ++ GI++ F+TLHVG GTF PVKVED H M
Sbjct: 163 QTVYSKEIGSAAAPTAGLHFTKELLKKIEEKGIEICFITLHVGLGTFRPVKVEDVTKHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I AQ +N K G RIV+VGTTS+R LE+A + G + SG+T+IFI P
Sbjct: 223 HSEFYIIRDDVAQKINKAKDEGRRIVAVGTTSIRTLESAADDKGYVKAKSGWTDIFIYPP 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ VD L++NFHLP+STL+MLVS+ E Y A+ YRF+S+GD ++
Sbjct: 283 YKFKCVDALITNFHLPESTLIMLVSSLSTREIILNAYNVAVKDKYRFFSFGDAMFIY 339
>gi|319947352|ref|ZP_08021585.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus australis ATCC 700641]
gi|319746594|gb|EFV98854.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus australis ATCC 700641]
Length = 342
Score = 472 bits (1216), Expect = e-131, Method: Composition-based stats.
Identities = 155/357 (43%), Positives = 212/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++++ + D + L DA+V
Sbjct: 1 MNTNDFDFHLPEELIAQTPLEKRDASKLLILNRQTG---QMEDQHFDAIINELEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L+GV+ + L + + W V A+P+K +K+G ++ F
Sbjct: 58 MNNTRVLPARLHGVK----PDTGGHVELLLLKNIEGDQWEVLAKPAKRLKEGGVVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+AT+I K G ++ FS GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLQATLIKKLEHGGCIVEFSYQGIFLE-VLESLGEMPLPPYIHEK----LEDQERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ G+ + ++TLHVG GTF PV V++ D H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTPELLQKIEDKGVHLVYLTLHVGLGTFRPVSVDNLDQHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ G RIV+VGTTS+R LET + +G + SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAQTLRQVKASGHRIVAVGTTSIRTLETIGNKFNGELQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+++ VD +NFHLPKSTL+MLVSAF G E T YQHAI YRF+S+GD +
Sbjct: 285 GYQWQVVDAFSTNFHLPKSTLVMLVSAFAGRELTLNAYQHAIDQGYRFFSFGDAMFI 341
>gi|228917055|ref|ZP_04080614.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
gi|228842583|gb|EEM87672.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
Length = 350
Score = 472 bits (1216), Expect = e-131, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 205/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGG---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI D Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYEGI-FYEILDELGEMPLPPYIKE----TLEDRDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVELAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT +G + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHNGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGDAMFV 341
>gi|254852155|ref|ZP_05241503.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL R2-503]
gi|254931466|ref|ZP_05264825.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes HPB2262]
gi|300764802|ref|ZP_07074792.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL N1-017]
gi|258605458|gb|EEW18066.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL R2-503]
gi|293583018|gb|EFF95050.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes HPB2262]
gi|300514478|gb|EFK41535.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL N1-017]
gi|328465567|gb|EGF36796.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes 1816]
gi|328474891|gb|EGF45691.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes 220]
Length = 342
Score = 472 bits (1216), Expect = e-131, Method: Composition-based stats.
Identities = 155/357 (43%), Positives = 221/357 (61%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++LN DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKKSGD---IKDQHFTDIISYLNEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G++ + I L + N+W +P+K I+KG + F
Sbjct: 58 LNDTRVLPARLHGIK----DETGAHIEVLLLKQKEGNAWETLVKPAKRIRKGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A +++ G +L FS GI + +G +PLPPYI + D Y
Sbjct: 111 -GDGALKAICLEELEHGGRILEFSYEGI-FYEVLEQLGEMPLPPYIKEQLA----DQDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEDLLAKISAKGVEIIFVTLHVGLGTFRPVDVEDTTNHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + +A+ +N +K++GG++V+VGTTS+R LET A+ DG + SG+T IFI+P
Sbjct: 225 HSEFYRLTEESAERINKIKAQGGKVVAVGTTSIRTLETIASRHDGKLVAESGWTEIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+AVD L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD +
Sbjct: 285 GYTFQAVDALITNFHLPKSTLIMLVSALSDRTKILAAYNHAVEEQYRFFSFGDAMFI 341
>gi|52141088|ref|YP_085741.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus E33L]
gi|81686089|sp|Q634C6|QUEA_BACCZ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|51974557|gb|AAU16107.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queuosine
biosynthesis protein queA) [Bacillus cereus E33L]
Length = 350
Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats.
Identities = 148/357 (41%), Positives = 204/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLQGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI D Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKE----TLEDRDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVELAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGDAMFV 341
>gi|65321784|ref|ZP_00394743.1| COG0809: S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
(queuine synthetase) [Bacillus anthracis str. A2012]
Length = 354
Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats.
Identities = 148/357 (41%), Positives = 205/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 5 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 62 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI D Y
Sbjct: 115 -GEGKLKATCTGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKE----TLEDRDRY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 169 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVELAFITLHVGLGTFRPVSADTIEEHHM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 229 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 289 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGDAMFV 345
>gi|229186657|ref|ZP_04313818.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus BGSC 6E1]
gi|228596916|gb|EEK54575.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus BGSC 6E1]
Length = 350
Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 205/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI D Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKE----TLEDRDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVELAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT +G + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHNGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGDAMFV 341
>gi|322385861|ref|ZP_08059504.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus cristatus ATCC 51100]
gi|321270146|gb|EFX53063.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus cristatus ATCC 51100]
Length = 342
Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats.
Identities = 151/357 (42%), Positives = 211/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RDS+RL++V SD ++ L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDSSRLLIVDRETG---QFSDQHFDNIIDQLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGTK----PETGGHVELLLLKNTQGDFWEVLAKPAKRLRVGTRVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV ++ G ++ F GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVTEELEHGGRIVRFDYQGIFLE-VLESLGEMPLPPYIHEK----LEDRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ ++H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLDKIAAKGVKLVYLTLHVGLGTFRPVSVDNLEEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A+ L VK+ G RI++VGTTS+R LET ++ +G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAETLRQVKASGHRIIAVGTTSIRTLETIGSKFEGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+++ VD +NFHLPKSTL+MLVSAF G + T + Y++AI+ YRF+S+GD +
Sbjct: 285 GYQWKIVDAFSTNFHLPKSTLVMLVSAFAGRQLTLEAYEYAIAERYRFFSFGDAMFI 341
>gi|297529248|ref|YP_003670523.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Geobacillus
sp. C56-T3]
gi|297252500|gb|ADI25946.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Geobacillus
sp. C56-T3]
Length = 342
Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats.
Identities = 146/358 (40%), Positives = 202/358 (56%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF LP IA P+ R ++RLMV+ I ++ ++LN D +V
Sbjct: 1 MKVDLFDFHLPEELIAQTPLPDRAASRLMVLDKRTGA---IRHETFRNIISYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L ++ + W +P K +K G L F
Sbjct: 58 LNDTRVMPARLYGEK----EETGGTVEVLLLKQLDGDRWETLVKPGKRVKPGTKLTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +LEA +D G +L FS G+ ++ +G +PLPPYI K D Y
Sbjct: 111 -GGGKLEAVCLDTLEHGGRVLEFSYDGL-FYEVLAELGEMPLPPYIKEKLD----DPERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GS AAPTAGLHFT LL + G+ + F+TLHVG GTF PV+V++ + H M
Sbjct: 165 QTVYAREIGSAAAPTAGLHFTEELLDAIREKGVHIVFITLHVGLGTFRPVQVDEVEKHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA+ LN V+ +GGRI++VGTTS R LET A +G SG+T+IFI P
Sbjct: 225 HAEFYQMSEETAETLNRVREQGGRIIAVGTTSTRTLETIAGKHNGRFVAESGWTDIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY F+ +D L++NFHLPKSTL+MLVSA G E YQ + YRF+S+GD L+
Sbjct: 285 GYEFKGIDGLVTNFHLPKSTLIMLVSALAGRENILHAYQVGVKERYRFFSFGDAMLII 342
>gi|290893933|ref|ZP_06556909.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL J2-071]
gi|290556471|gb|EFD90009.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL J2-071]
Length = 342
Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats.
Identities = 156/357 (43%), Positives = 222/357 (62%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++LN DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKESGD---IKDQHFTDIISYLNEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G++ + I L + N+W +P+K I+KG + F
Sbjct: 58 LNDTRVLPARLHGIK----DETGAHIEVLLLKQKEGNAWETLVKPAKRIRKGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+AT +++ G +L FS GI + +G +PLPPYI + D Y
Sbjct: 111 -GDGALKATCLEELEHGGRILEFSYEGI-FYEVLEQLGEMPLPPYIKEQLA----DQDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEDLLAKISAKGVEIIFVTLHVGLGTFRPVDVEDTANHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + +A+ +N +K++GG++V+VGTTS+R LET A+ DG + SG+T IFI+P
Sbjct: 225 HSEFYRLTEESAERINKIKAQGGKVVAVGTTSIRTLETIASRHDGKLVAESGWTEIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+AVD L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD +
Sbjct: 285 GYTFQAVDALITNFHLPKSTLIMLVSALSDRTKILAAYNHAVEQQYRFFSFGDAMFI 341
>gi|229146989|ref|ZP_04275351.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus BDRD-ST24]
gi|228636486|gb|EEK92954.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus BDRD-ST24]
Length = 350
Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats.
Identities = 148/357 (41%), Positives = 205/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEDRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI D Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKE----TLEDRDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVQLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETADLLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGDAMFV 341
>gi|30022493|ref|NP_834124.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus ATCC 14579]
gi|229129698|ref|ZP_04258666.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus BDRD-Cer4]
gi|38372443|sp|Q817W5|QUEA_BACCR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|29898051|gb|AAP11325.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus ATCC 14579]
gi|228653815|gb|EEL09685.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus BDRD-Cer4]
Length = 350
Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats.
Identities = 148/357 (41%), Positives = 205/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEDRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI D Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKE----TLEDRDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVQLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKQNGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGDAMFV 341
>gi|327193336|gb|EGE60240.1| S-adenosylmethionine: tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis) protein [Rhizobium etli CNPAF512]
Length = 366
Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats.
Identities = 217/365 (59%), Positives = 261/365 (71%), Gaps = 7/365 (1%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLS---CPLVISDHLVSDLPAFLNSND 57
M V FDFDLP RIALRP PRDSARL+VV+P+ +SDH V DLP+FL + D
Sbjct: 1 MRVDLFDFDLPDERIALRPAEPRDSARLLVVNPHAESVHAESALSDHHVYDLPSFLRAGD 60
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
A+VFN+TKVI AQL G+R +++S TLHMR+ PN W +A+P K IK+GD + F
Sbjct: 61 ALVFNDTKVIPAQLEGIRHR-DGAGGQQVSATLHMRIGPNRWKAFAKPGKRIKEGDRIAF 119
Query: 118 FSQDGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
L+ATV +K GE+ L F ++G LE I+ VG IPLPPYIA KRP D
Sbjct: 120 GHSGESCFLGSLDATVEEKGEAGEVTLAFDLTGPALEEAIAAVGHIPLPPYIAAKRPEDE 179
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
RD DYQT YA+ +G+VAAPTAGLHFT +L + L GI+ +FVTLHVGAGTF+PVK +D
Sbjct: 180 RDRADYQTIYAREEGAVAAPTAGLHFTPDLFAALDKAGIERHFVTLHVGAGTFLPVKADD 239
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
TDDH MH E G++ A A LN+VK+RGGRIV VGTTSLRLLE+A EDG I PW+G T
Sbjct: 240 TDDHKMHLESGYVSAEIAARLNAVKARGGRIVCVGTTSLRLLESAAGEDGKIKPWAGATG 299
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFITPGYRF+AVD+LM+NFHLP+STL MLVSAF G E Y+HAIS YRFYSYGD S
Sbjct: 300 IFITPGYRFKAVDMLMTNFHLPRSTLFMLVSAFSGFETMHAAYEHAISTGYRFYSYGDAS 359
Query: 355 LLFQK 359
LLF+K
Sbjct: 360 LLFRK 364
>gi|288555345|ref|YP_003427280.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
pseudofirmus OF4]
gi|288546505|gb|ADC50388.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
pseudofirmus OF4]
Length = 341
Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats.
Identities = 151/356 (42%), Positives = 214/356 (60%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDF LP IA P+ R ++RL+V+ + I D + S + +L S D +V
Sbjct: 1 MDVRDFDFYLPDELIAQTPLLDRTASRLLVLDKDNGA---IKDDVFSSITDYLKSGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L GV+ +I L ++ + W A+P+K +KKG + F
Sbjct: 58 LNDTRVLPARLYGVK----EDTGAKIELLLLKQLEGDKWETLAKPAKRVKKGTTITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L AT I++ + G ++ + GI L + +G +PLPPYI + D Y
Sbjct: 111 -GEGLLTATCIEETDQGGRVVELAYEGI-LHEVLDQLGEMPLPPYIKEQLD----DQERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +AK +GS AAPTAGLHFT +LL L G+ + F+TLHVG GTF PV VED + H M
Sbjct: 165 QTVFAKNRGSAAAPTAGLHFTEDLLQTLQDKGVHLAFITLHVGLGTFRPVSVEDVESHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + TA+ LN VK GG++V+VGTTS R LET E+G SG+T+IFI PG
Sbjct: 225 HAEYYQMSEGTARLLNEVKENGGKVVAVGTTSARTLETIMNENGTYCEASGWTSIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLPKSTL+MLVSA G E + Y HA+ YRF+S+GD +
Sbjct: 285 YKFKGIDGLLTNFHLPKSTLVMLVSALAGREHILQAYNHAVKERYRFFSFGDAMFI 340
>gi|255658191|ref|ZP_05403600.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Mitsuokella
multacida DSM 20544]
gi|260849499|gb|EEX69506.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Mitsuokella
multacida DSM 20544]
Length = 368
Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats.
Identities = 146/360 (40%), Positives = 206/360 (57%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M++ +FD+DLP RIA P+ PR+++RLMV+ P I DL FL D ++
Sbjct: 1 MLLSDFDYDLPEERIAQVPIEPRNASRLMVLDPVT---KEIEHRHFYDLKEFLEPGDTLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+V+ A+L G R ++ + L R+ N W +P K K G+++ F +
Sbjct: 58 FNDTRVMPARLIGHR----DQTGGRVEVFLLRRLDANHWETLVKPGKKAKPGNVIRFGDE 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L TV + + G ++ F GI E + +G PLPPYI K D Y
Sbjct: 114 -----LSCTVTEHTDFGGRIVEFHYDGI-FEEILDRLGETPLPPYIHEK----LEDKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + +GS AAPTAGLHFT + L +G+ + FVTLHVG GTF PV VE+ ++H M
Sbjct: 164 QTVYNREEGSAAAPTAGLHFTKEQMQELREMGVNLGFVTLHVGLGTFRPVNVENIEEHEM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I TA+ + K G R+++VGTTS+R LE+A T I SG+T IFI PG
Sbjct: 224 HKEYYCIPDETAKLIMDTKKAGHRVIAVGTTSIRTLESAATAKNEIAGKSGWTGIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
Y F+ VD +++NFHLPKSTL+ML+SAF G Y+ A+ YRF+S+GD + +K+
Sbjct: 284 YDFKIVDAIITNFHLPKSTLIMLISAFAGRNFVLNAYKTAVEMKYRFFSFGDAMFIRRKQ 343
>gi|228902946|ref|ZP_04067087.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis IBL 4222]
gi|228967494|ref|ZP_04128522.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar sotto str. T04001]
gi|228792209|gb|EEM39783.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar sotto str. T04001]
gi|228856730|gb|EEN01249.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis IBL 4222]
Length = 350
Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 205/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI D Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKE----TLEDRDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVQLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT +G + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHNGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGDAMFV 341
>gi|322517220|ref|ZP_08070102.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus vestibularis ATCC 49124]
gi|322124207|gb|EFX95731.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus vestibularis ATCC 49124]
Length = 347
Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats.
Identities = 159/360 (44%), Positives = 215/360 (59%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF+LP IA P+ RD+++L+V+ P ++D + LN DA+V
Sbjct: 1 MNTNDFDFELPEELIAQTPLEQRDASKLLVIDPVT---KEMTDTHFDHIIDQLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + N + L + W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLYGEK----NDTHGHVEFLLLKNTQGDQWEVLAKPAKRLKVGAKVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV ++ + G ++ FS GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVTEELDHGGRIVEFSYDGIFLE-VLESLGEMPLPPYIHEK----LEDRDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + + G+K+ ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTPELLQNIEAKGVKLVYLTLHVGLGTFRPVSVDNVDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A LNSVK+ GGRIV+VGTTS+R LET + +G + SG+TNIFI P
Sbjct: 225 HSEFYTLSQEAADTLNSVKATGGRIVAVGTTSIRTLETIGNKYNGRLQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY+F VD +NFHLPKSTL+MLVSAF G E Y+HA+ YRF+S+GD + Q+
Sbjct: 285 GYQFTVVDAFSTNFHLPKSTLVMLVSAFAGREFVLDAYKHAVQERYRFFSFGDAMFVTQR 344
>gi|284801921|ref|YP_003413786.1| hypothetical protein LM5578_1676 [Listeria monocytogenes 08-5578]
gi|284995063|ref|YP_003416831.1| hypothetical protein LM5923_1628 [Listeria monocytogenes 08-5923]
gi|284057483|gb|ADB68424.1| hypothetical protein LM5578_1676 [Listeria monocytogenes 08-5578]
gi|284060530|gb|ADB71469.1| hypothetical protein LM5923_1628 [Listeria monocytogenes 08-5923]
Length = 342
Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats.
Identities = 156/357 (43%), Positives = 221/357 (61%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++LN DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKESGD---IKDQHFTDIISYLNEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G++ + I L + N+W +P+K I+KG + F
Sbjct: 58 LNDTRVLPARLHGIK----DETGAHIEVLLLKQKEGNAWETLVKPAKRIRKGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+AT +++ G +L FS GI + +G +PLPPYI + D Y
Sbjct: 111 -GDGALKATCLEELEHGGRILEFSYEGI-FYEVLEQLGEMPLPPYIKEQLA----DQDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL ++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEDLLEQISAKGVEIIFVTLHVGLGTFRPVDVEDTTNHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + +A+ +N +K++GG++V+VGTTS+R LET A+ DG + SG+T IFI+P
Sbjct: 225 HSEFYRLTEESAERINKIKAQGGKVVAVGTTSIRTLETIASRHDGKLVAESGWTEIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+AVD L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD +
Sbjct: 285 GYTFQAVDALITNFHLPKSTLIMLVSALSDRTKILAAYNHAVGEQYRFFSFGDAMFI 341
>gi|327439542|dbj|BAK15907.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
[Solibacillus silvestris StLB046]
Length = 345
Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats.
Identities = 150/361 (41%), Positives = 206/361 (57%), Gaps = 17/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDF LP IA P+ R ++RLMVV+PN L + H + LN+ D +V
Sbjct: 1 MKVEDFDFYLPEELIAQTPLLDRTASRLMVVNPNS---LEVEHHTFGHILDELNAGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L GV+ I L + + + W +P+K +K G ++ F
Sbjct: 58 LNDTRVLPARLMGVKA----DTGANIELLLLKQTNDDEWETLVKPAKRVKTGTVVTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L AT + + G F+ GI + +G +PLPPYI K D Y
Sbjct: 111 -GDGLLTATCTGELDHGGRTFKFTYDGI-FYEILDQLGEMPLPPYIREK----LEDQDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL + + G++V F+TLHVG GTF PV V+ +DH M
Sbjct: 165 QTVYAKERGSAAAPTAGLHFTQPLLEAIKAKGVEVVFITLHVGLGTFRPVSVDSIEDHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + A + VK GG+++SVGTTS R LET A+ DG I G+TNIFI P
Sbjct: 225 HSEFYSVSEEAAAVIERVKQAGGKVISVGTTSTRTLETVASKNDGKIVASHGWTNIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY ++A+D L++NFHLPKSTL+MLVSA E Y+ A+ YRF+S+GD +
Sbjct: 285 GYEYKAIDGLITNFHLPKSTLVMLVSALASKETIMNAYEQAVKEKYRFFSFGDAMFIRPA 344
Query: 360 R 360
+
Sbjct: 345 K 345
>gi|293375248|ref|ZP_06621532.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Turicibacter sanguinis PC909]
gi|325840658|ref|ZP_08167109.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Turicibacter sp. HGF1]
gi|292646146|gb|EFF64172.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Turicibacter sanguinis PC909]
gi|325490222|gb|EGC92556.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Turicibacter sp. HGF1]
Length = 342
Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats.
Identities = 142/357 (39%), Positives = 201/357 (56%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDF+LP IA P+ RD++RLMV++ + + D+ +L ND +V
Sbjct: 1 MRVDQFDFELPDELIAQTPLKDRDTSRLMVLNKKTG---EVKHEVFHDVLNYLRPNDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKV+ A+L G + I L + + W +P+K +K G I+ F
Sbjct: 58 LNNTKVMPARLMGQK----PDTGASIEVLLLKQEQQDCWETLVKPAKRVKVGTIVEF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A I + G+ + F GI + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLKAECISTGDMGKRVFKFMYDGI-FYEVLDSLGEMPLPPYITEKLD----DRDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +AK GS AAPTAGLHFT LL + + G+K+ +VTLHVG GTF PV V+ ++H M
Sbjct: 165 QTVFAKEIGSAAAPTAGLHFTPELLEEIQAKGVKIAYVTLHVGLGTFRPVSVDSVEEHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + TA LN GGRI++VGTTS R LET + G G+T+IFI P
Sbjct: 225 HAEFYQMSQETADILNQTHELGGRIITVGTTSTRTLETIARDHGKFVACEGWTDIFIYPP 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ +D +++NFHLPKSTL+ML+S+ G + Y+ A+ YRF+S+GD L+
Sbjct: 285 YQFKGIDGMITNFHLPKSTLIMLISSLAGQDAVMNAYKIAVEEKYRFFSFGDAMLII 341
>gi|30264488|ref|NP_846865.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. Ames]
gi|42783549|ref|NP_980796.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus ATCC 10987]
gi|47529946|ref|YP_021295.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. 'Ames Ancestor']
gi|47566608|ref|ZP_00237430.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus G9241]
gi|49187308|ref|YP_030560.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. Sterne]
gi|49481504|ref|YP_038468.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|165871981|ref|ZP_02216622.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. A0488]
gi|167640749|ref|ZP_02399009.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. A0193]
gi|170688656|ref|ZP_02879861.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. A0465]
gi|177653957|ref|ZP_02935998.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. A0174]
gi|190566984|ref|ZP_03019900.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis Tsiankovskii-I]
gi|196034446|ref|ZP_03101855.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus W]
gi|196039272|ref|ZP_03106578.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus NVH0597-99]
gi|206976063|ref|ZP_03236973.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus H3081.97]
gi|217961909|ref|YP_002340479.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH187]
gi|218905613|ref|YP_002453447.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH820]
gi|227817196|ref|YP_002817205.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. CDC 684]
gi|228929463|ref|ZP_04092484.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228935738|ref|ZP_04098551.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228948132|ref|ZP_04110416.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|228987671|ref|ZP_04147783.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|229123959|ref|ZP_04253151.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus 95/8201]
gi|229141157|ref|ZP_04269698.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus BDRD-ST26]
gi|229158033|ref|ZP_04286104.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus ATCC 4342]
gi|229602726|ref|YP_002868704.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. A0248]
gi|254684173|ref|ZP_05148033.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. CNEVA-9066]
gi|254736520|ref|ZP_05194226.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. Western North America USA6153]
gi|254741558|ref|ZP_05199245.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. Kruger B]
gi|254751343|ref|ZP_05203380.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. Vollum]
gi|254757675|ref|ZP_05209702.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. Australia 94]
gi|301055926|ref|YP_003794137.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis CI]
gi|38372450|sp|Q81LH1|QUEA_BACAN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|81568824|sp|Q730B3|QUEA_BACC1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|81613565|sp|Q6HDA8|QUEA_BACHK RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|226736730|sp|B7JQ04|QUEA_BACC0 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|226736733|sp|B7HQH7|QUEA_BACC7 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|254764263|sp|C3P9A5|QUEA_BACAA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|254764264|sp|C3L6U7|QUEA_BACAC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|30259146|gb|AAP28351.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. Ames]
gi|42739478|gb|AAS43404.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus ATCC 10987]
gi|47505094|gb|AAT33770.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. 'Ames Ancestor']
gi|47556638|gb|EAL14970.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus G9241]
gi|49181235|gb|AAT56611.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. Sterne]
gi|49333060|gb|AAT63706.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queuosine
biosynthesis protein queA) [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|164712271|gb|EDR17807.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. A0488]
gi|167511321|gb|EDR86707.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. A0193]
gi|170667342|gb|EDT18100.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. A0465]
gi|172081012|gb|EDT66090.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. A0174]
gi|190561975|gb|EDV15944.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis Tsiankovskii-I]
gi|195992988|gb|EDX56947.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus W]
gi|196029899|gb|EDX68500.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus NVH0597-99]
gi|206745815|gb|EDZ57212.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus H3081.97]
gi|217063781|gb|ACJ78031.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH187]
gi|218540066|gb|ACK92464.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH820]
gi|227005653|gb|ACP15396.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. CDC 684]
gi|228625486|gb|EEK82242.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus ATCC 4342]
gi|228642320|gb|EEK98610.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus BDRD-ST26]
gi|228659261|gb|EEL14909.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus 95/8201]
gi|228772056|gb|EEM20510.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|228811490|gb|EEM57827.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|228823976|gb|EEM69795.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228830251|gb|EEM75867.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|229267134|gb|ACQ48771.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. A0248]
gi|300378095|gb|ADK06999.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus biovar anthracis str. CI]
Length = 350
Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats.
Identities = 148/357 (41%), Positives = 205/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI D Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKE----TLEDRDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVELAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGDAMFV 341
>gi|327468945|gb|EGF14417.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis SK330]
Length = 342
Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats.
Identities = 157/357 (43%), Positives = 210/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL+VV V SD + L DA+V
Sbjct: 1 MNTADFDFDLPEELIAQTPLEKRDASRLLVVDKETG---VFSDQHFDQIIDQLQPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGIK----PETGGHVELLLLKNTQGDDWEVLAKPAKRLRVGAQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATVI++ G ++ F GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVIEELEHGGRIVRFGYEGIFLE-VLESLGEMPLPPYIHEKLA----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V+ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLEQIAAKGVKLVYLTLHVGLGTFRPVSVDSLDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ GG +++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRQVKANGGHVIAVGTTSIRTLETIGSKFQGQIEADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY ++ VD +NFHLPKSTL+MLVSAF G T + Y+HAI+ YRF+S+GD +
Sbjct: 285 GYDWKIVDAFSTNFHLPKSTLVMLVSAFAGRSLTLEAYEHAIAERYRFFSFGDAMFI 341
>gi|322392655|ref|ZP_08066115.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus peroris ATCC 700780]
gi|321144647|gb|EFX40048.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus peroris ATCC 700780]
Length = 342
Score = 472 bits (1214), Expect = e-131, Method: Composition-based stats.
Identities = 151/358 (42%), Positives = 205/358 (57%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD++RL++V+ D + L DA+V
Sbjct: 1 MNTNDFDFDLPEELIAQTPLEQRDASRLLIVNRKTG---EFQDRHFHSIIEMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G + + L + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLHGEK----EETGGHVELLLLKNTVGDEWEVLAKPAKRLKVGARVIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYEGIFLE-VLESLGEMPLPPYIHEKLD----DQERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLEEIQQKGVHLVYLTLHVGLGTFRPVTVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L +K GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRQIKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E + YQHAI YRF+S+GD ++
Sbjct: 285 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLEAYQHAIEERYRFFSFGDAMFIY 342
>gi|313894608|ref|ZP_07828171.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Veillonella
sp. oral taxon 158 str. F0412]
gi|313440798|gb|EFR59227.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Veillonella
sp. oral taxon 158 str. F0412]
Length = 341
Score = 472 bits (1214), Expect = e-131, Method: Composition-based stats.
Identities = 153/356 (42%), Positives = 206/356 (57%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD++LP IA PV PRD+ARL+ + + DL L+ D +V
Sbjct: 1 MKVIDFDYELPEELIAQHPVEPRDTARLLTLDKVTGEVVHKEH--FYDLLEELHEGDVLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L G R ++ L N W +P K G ++ F
Sbjct: 59 FNNTKVIPARLYGHR----QGSGGKVEVLLLTPCGENRWECLVKPGKKCPVGQVIEF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
RL TVIDK G ++ F+ +G+ + I +G +PLPPYI K D Y
Sbjct: 112 --DDRLSGTVIDKTEFGGRIIEFTCNGV-FDDVIQEIGEMPLPPYIHEK----LEDKDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+++ FVTLHVG GTF PV E +DH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTPELLEKIKAKGVELEFVTLHVGLGTFRPVSAETIEDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA +N+ K +G RI++VGTTS+R LE+AT ++GI+ SG T IFI PG
Sbjct: 225 HSEFFVVSQDTADRINAAKQKGSRIIAVGTTSVRTLESATNDEGILQGISGTTQIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STLLML+SA G E Y+ A+ YRF+S+GD +
Sbjct: 285 YKFKMIDALVTNFHLPQSTLLMLISALAGREHCLAAYEEAVKERYRFFSFGDAMFI 340
>gi|313895559|ref|ZP_07829115.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Selenomonas
sp. oral taxon 137 str. F0430]
gi|312975685|gb|EFR41144.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Selenomonas
sp. oral taxon 137 str. F0430]
Length = 346
Score = 472 bits (1214), Expect = e-131, Method: Composition-based stats.
Identities = 150/360 (41%), Positives = 211/360 (58%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+DLP RIA P+ PRD++RLMV+ P I +L L D ++
Sbjct: 1 MDISDFDYDLPEKRIAQTPLEPRDASRLMVLDP---AEQTIEHRHFYELDVLLQPGDVLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G R ++ ++ L ++ + W +P K + GD + F +
Sbjct: 58 FNDTRVIPARLIGAR----DKTGAKVEVLLLRQIDRDRWEALVKPGKKARIGDRIRFGEE 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L +I + G ++ F GI E + +G +PLPPYI +K D Y
Sbjct: 114 -----LSCGIISHTDFGGRIVKFIYQGI-FEEILDRLGEMPLPPYIRKK----LSDADRY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ +GS AAPTAGLHFT LL RL G+ FVTLHVG GTF PV+ + ++H+M
Sbjct: 164 QTIYSRERGSAAAPTAGLHFTEELLVRLKEKGVIFGFVTLHVGLGTFRPVQEQTIENHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I TAQ + K+ G RIV+VGTTS+R LE+A E G I P SG+T+IFI PG
Sbjct: 224 HREYYAIPEETAQIIRRAKAEGRRIVAVGTTSIRTLESAAGETGEIRPTSGWTDIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRF+ VD +++NFHLPKSTL+ML+SAF G Y+ A+ YRF+S+GD L+ ++
Sbjct: 284 YRFKVVDAIITNFHLPKSTLIMLISAFAGRSFILNAYKQAVDEGYRFFSFGDAMLIQGRK 343
>gi|218899587|ref|YP_002447998.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus G9842]
gi|226736731|sp|B7IIT0|QUEA_BACC2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|218545497|gb|ACK97891.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus G9842]
Length = 350
Score = 472 bits (1214), Expect = e-131, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 205/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEDRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI D Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKE----TLEDRDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVQLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT +G + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHNGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGDAMFV 341
>gi|225854863|ref|YP_002736375.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae JJA]
gi|225723833|gb|ACO19686.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae JJA]
Length = 342
Score = 472 bits (1214), Expect = e-131, Method: Composition-based stats.
Identities = 151/358 (42%), Positives = 206/358 (57%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETG---EMQDKHFYSIIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLE-VLESLGEMPLPPYIHEKLD----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|312863897|ref|ZP_07724135.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus vestibularis F0396]
gi|311101433|gb|EFQ59638.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus vestibularis F0396]
Length = 347
Score = 472 bits (1214), Expect = e-131, Method: Composition-based stats.
Identities = 158/360 (43%), Positives = 216/360 (60%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF+LP IA P+ RD+++L+V+ P ++D + LN DA+V
Sbjct: 1 MNTNDFDFELPEELIAQTPLEQRDASKLLVIDPVT---KEMTDTHFDHIIDQLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + N + L + W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLYGEK----NDTHGHVEFLLLKNTQGDQWEVLAKPAKRLKVGAKVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV ++ + G ++ FS +GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVTEELDHGGRIVEFSYNGIFLE-VLESLGEMPLPPYIHEK----LEDRDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + + G+K+ ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTPELLQNIEAKGVKLVYLTLHVGLGTFRPVSVDNVDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A LNSVK+ GGRIV+VGTTS+R LET + +G + SG+TNIFI P
Sbjct: 225 HSEFYTLSQEAADTLNSVKATGGRIVAVGTTSIRTLETIGNKYNGRLQAESGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY+F VD +NFHLPKSTL+MLVSAF G E Y+HA+ YRF+S+GD + ++
Sbjct: 285 GYQFTVVDAFSTNFHLPKSTLVMLVSAFAGREFVLDAYKHAVQERYRFFSFGDAMFVTRR 344
>gi|228478265|ref|ZP_04062873.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus salivarius SK126]
gi|228249944|gb|EEK09214.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus salivarius SK126]
Length = 347
Score = 472 bits (1214), Expect = e-131, Method: Composition-based stats.
Identities = 156/360 (43%), Positives = 215/360 (59%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF+LP IA P+ RD+++L+V+ P ++D + LN DA+V
Sbjct: 1 MNTNDFDFELPEELIAQTPLEQRDASKLLVIDPVT---KEMTDTHFDHIIDQLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLYGEK----PDTHGHVEFLLLKNTQGDQWEVLAKPAKRLKVGAKVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV ++ + G ++ F+ GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVTEELDHGGRIVEFNYDGIFLE-VLESLGEMPLPPYIHEK----LEDRDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTPELLQKIEAKGVKLVYLTLHVGLGTFRPVSVDNVDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A LNSVK+ GGRI++VGTTS+R LET + DG + SG+TNIFI P
Sbjct: 225 HSEFYTLSQDAADTLNSVKAAGGRIIAVGTTSIRTLETIGNKYDGQLQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY+F VD +NFHLPKSTL+MLVSAF G E Y+HA+ YRF+S+GD + ++
Sbjct: 285 GYQFTVVDAFSTNFHLPKSTLVMLVSAFAGREFVLDAYKHAVQERYRFFSFGDAMFVTRR 344
>gi|226224132|ref|YP_002758239.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes Clip81459]
gi|254824410|ref|ZP_05229411.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL J1-194]
gi|254992899|ref|ZP_05275089.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL J2-064]
gi|255520699|ref|ZP_05387936.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL J1-175]
gi|259551458|sp|C1KVH8|QUEA_LISMC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|225876594|emb|CAS05303.1| Putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Listeria monocytogenes serotype 4b str. CLIP 80459]
gi|293593645|gb|EFG01406.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL J1-194]
Length = 342
Score = 472 bits (1214), Expect = e-131, Method: Composition-based stats.
Identities = 155/357 (43%), Positives = 221/357 (61%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++LN DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKKSGD---IKDQHFTDIISYLNEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G++ + I L + N+W +P+K I+KG + F
Sbjct: 58 LNDTRVLPARLHGIK----DETGAHIEVLLLKQKEGNAWETLVKPAKRIRKGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A +++ G +L FS GI + +G +PLPPYI + D Y
Sbjct: 111 -GDGALKAICLEELEHGGRILEFSYEGI-FYEVLEQLGEMPLPPYIKEQLA----DQDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEDLLAKISAKGVEIIFVTLHVGLGTFRPVDVEDTANHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + +A+ +N +K++GG++V+VGTTS+R LET A+ DG + SG+T IFI+P
Sbjct: 225 HSEFYRLTEESAERINKIKAQGGKVVAVGTTSIRTLETIASRHDGKLVAESGWTEIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+AVD L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD +
Sbjct: 285 GYTFQAVDALITNFHLPKSTLIMLVSALSDRTKILAAYNHAVEEQYRFFSFGDAMFI 341
>gi|296331683|ref|ZP_06874152.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
subtilis subsp. spizizenii ATCC 6633]
gi|305675358|ref|YP_003867030.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
subtilis subsp. spizizenii str. W23]
gi|296151278|gb|EFG92158.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
subtilis subsp. spizizenii ATCC 6633]
gi|305413602|gb|ADM38721.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
subtilis subsp. spizizenii str. W23]
Length = 342
Score = 472 bits (1214), Expect = e-131, Method: Composition-based stats.
Identities = 148/358 (41%), Positives = 209/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP IA P+ RD++RLMV+ + ++D + +F D +V
Sbjct: 1 MKVDLFDFELPERLIAQVPLEQRDASRLMVLDKHTG---ELTDSSFKHIISFFKEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + ++ L + + + W A+P+K +KKG ++ F
Sbjct: 58 LNNTRVLPARLFGTK----EDTGAKVELLLLKQEAGDRWETLAKPAKRVKKGTVVTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A ++ G + F GI + +G +PLPPYI + D Y
Sbjct: 111 -GDGRLKAVCTEELEHGGRRMEFQYDGI-FYEVLESLGEMPLPPYIKEQLD----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT +L +L G+++ F+TLHVG GTF PV +D ++H M
Sbjct: 165 QTVYSKEIGSAAAPTAGLHFTEEILQQLKDKGVQIEFITLHVGLGTFRPVSADDVEEHNM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
H+E + TA ALN V+ GGRI+SVGTTS R LET E DG SG+T+IFI P
Sbjct: 225 HAEFYQMSEETAAALNKVRENGGRIISVGTTSTRTLETIAGEHDGQFKASSGWTSIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY F+A+D +++NFHLPKS+L+MLVSA G E + Y HA+ YRF+S+GD L+
Sbjct: 285 GYEFKAIDGMITNFHLPKSSLIMLVSALAGRENVLRAYNHAVEEEYRFFSFGDAMLIL 342
>gi|322372469|ref|ZP_08047005.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sp. C150]
gi|321277511|gb|EFX54580.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sp. C150]
Length = 347
Score = 472 bits (1214), Expect = e-131, Method: Composition-based stats.
Identities = 160/360 (44%), Positives = 215/360 (59%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF+LP IA P+ RD+++L+V+ P ++D + LN DA+V
Sbjct: 1 MNTNDFDFELPEELIAQTPLKQRDASKLLVIDPVT---KEMTDTHFDHIIDQLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLYGEK----PDTHGHVEFLLLKNTQGDQWEVLAKPAKRLKVGAKVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV ++ + G ++ FS GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVTEELDHGGRIVEFSYDGIFLE-VLESLGEMPLPPYIHEK----LEDRDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ S G+K+ ++TLHVG GTF PV VE+ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTPELLQKIESKGVKLVYLTLHVGLGTFRPVSVENVDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A LNSVK+ GGRIV+VGTTS+R LET + DG + SG+TNIFI P
Sbjct: 225 HSEFYTLSQDAADTLNSVKAAGGRIVAVGTTSIRTLETIGNKYDGQLQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY+F VD +NFHLPKSTL+MLVSAF G E Y+HA+ YRF+S+GD + ++
Sbjct: 285 GYQFTVVDAFSTNFHLPKSTLVMLVSAFAGREFVLDAYKHAVQERYRFFSFGDAMFVTRR 344
>gi|182684374|ref|YP_001836121.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae CGSP14]
gi|182629708|gb|ACB90656.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae CGSP14]
Length = 346
Score = 471 bits (1213), Expect = e-131, Method: Composition-based stats.
Identities = 151/358 (42%), Positives = 206/358 (57%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 5 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETG---EMQDKHFHSIIDMLEPGDALV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 62 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE + +G +PLPPYI K D Y
Sbjct: 115 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLE-VLESLGEMPLPPYIHEKLD----DRERY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 169 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 229 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD ++
Sbjct: 289 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDAMFIY 346
>gi|169832445|ref|YP_001694851.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae Hungary19A-6]
gi|238688427|sp|B1ICL6|QUEA_STRPI RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|168994947|gb|ACA35559.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae Hungary19A-6]
Length = 342
Score = 471 bits (1213), Expect = e-131, Method: Composition-based stats.
Identities = 151/358 (42%), Positives = 206/358 (57%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETG---EMQDKHFHSIIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLE-VLESLGEMPLPPYIHEKLD----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKKNGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|218236041|ref|YP_002369227.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus B4264]
gi|228910254|ref|ZP_04074072.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis IBL 200]
gi|229048127|ref|ZP_04193698.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH676]
gi|229111890|ref|ZP_04241436.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock1-15]
gi|296504909|ref|YP_003666609.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis BMB171]
gi|226736732|sp|B7HE52|QUEA_BACC4 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|218163998|gb|ACK63990.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus B4264]
gi|228671646|gb|EEL26944.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock1-15]
gi|228723230|gb|EEL74604.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH676]
gi|228849418|gb|EEM94254.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis IBL 200]
gi|296325961|gb|ADH08889.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis BMB171]
Length = 350
Score = 471 bits (1213), Expect = e-131, Method: Composition-based stats.
Identities = 148/357 (41%), Positives = 205/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEDRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI D Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKE----TLEDRDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVQLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGDAMFV 341
>gi|282882961|ref|ZP_06291565.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Peptoniphilus lacrimalis 315-B]
gi|281297168|gb|EFA89660.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Peptoniphilus lacrimalis 315-B]
Length = 339
Score = 471 bits (1213), Expect = e-131, Method: Composition-based stats.
Identities = 145/357 (40%), Positives = 204/357 (57%), Gaps = 18/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P RD +RLM+++ I+ ++ +LN+ D +V
Sbjct: 1 MKTSDFSYDLPSELIAQHPAQKRDQSRLMLLNKKTG---EINHKKFYNIIDYLNNGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A++ G R +++ I L ++W A+P K +K G + F +
Sbjct: 58 LNDTRVMPARIFGHR----PEKDESIEILLL-NHKGDTWETLAKPGKKLKIGTEIIFSDE 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L+A V+D G L F SGI E + +G +PLPPYI K D Y
Sbjct: 113 -----LKAQVVDISEDGSRFLKFIYSGI-FEEILDRLGEMPLPPYIQEK----LEDKERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT LL ++ GI++ F+TLHVG GTF PVKVED H M
Sbjct: 163 QTVYSKEIGSAAAPTAGLHFTKELLKKIEEKGIEICFITLHVGLGTFRPVKVEDVTKHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I A+ +N K G RIV+VGTTS+R LE+A+ + G + SG+T+IFI P
Sbjct: 223 HSEFYIIRDDVAKKINKAKDEGRRIVAVGTTSIRTLESASDDKGYVEAKSGWTDIFIYPP 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ VD L++NFHLP+STL+MLVS+ E Y A+ YRF+S+GD ++
Sbjct: 283 YKFKCVDALITNFHLPESTLIMLVSSLSTREIILNAYNVAVKEKYRFFSFGDAMFIY 339
>gi|55820620|ref|YP_139062.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus thermophilus LMG 18311]
gi|81560864|sp|Q5M5E8|QUEA_STRT2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|55736605|gb|AAV60247.1| S-adenosylmethionine-tRNA ribosyltransferase-isomerase
[Streptococcus thermophilus LMG 18311]
Length = 347
Score = 471 bits (1213), Expect = e-131, Method: Composition-based stats.
Identities = 159/359 (44%), Positives = 216/359 (60%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF+LP IA P+ RD+++L+V+ P ++D + LN DA+V
Sbjct: 1 MNTNDFDFELPEELIAQTPLEQRDASKLLVIDPVTR---EMTDTHFDHIIDQLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLYGEK----TDTHGHVEFLLLKNTQGDQWEVLAKPAKRLKVGAKVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV ++ + G ++ FS +GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVTEELDHGGRIVEFSYNGIFLE-VLESLGEMPLPPYIHEK----LEDRDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTPELLQKIEAKGVKLVYLTLHVGLGTFRPVSVDNVDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A LNSVK+ GGRIV+VGTTS+R LET + DG + SG+TNIFI P
Sbjct: 225 HSEFYTLSQEAADTLNSVKAAGGRIVAVGTTSIRTLETIGNKYDGQLQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
GY+F VD +NFHLPKSTL+MLVSAF G E + Y+HAI YRF+S+GD + +
Sbjct: 285 GYQFTVVDAFSTNFHLPKSTLVMLVSAFAGREFVLEAYKHAIQERYRFFSFGDAMFVTR 343
>gi|315282447|ref|ZP_07870859.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
marthii FSL S4-120]
gi|313613910|gb|EFR87642.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
marthii FSL S4-120]
Length = 342
Score = 471 bits (1213), Expect = e-131, Method: Composition-based stats.
Identities = 155/357 (43%), Positives = 221/357 (61%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++LN DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKESG---EIKDQHFTDIISYLNEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G++ + I L + N+W +P+K I+KG + F
Sbjct: 58 LNDTRVLPARLHGIK----DETGAHIEVLLLKQKEGNAWETLVKPAKRIRKGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+AT +++ G +L F+ GI + +G +PLPPYI + D Y
Sbjct: 111 -GDGALKATCLEELEHGGRILEFTYEGI-FYEVLEQLGEMPLPPYIKEQLA----DQDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEDLLAKISAKGVEIIFVTLHVGLGTFRPVDVEDTTNHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + +A +N +K++GG++V+VGTTS+R LET A+ DG + SG+T IFI+P
Sbjct: 225 HSEFYRLTEESAARINQIKAQGGKVVAVGTTSIRTLETIASRHDGKLVAESGWTEIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+AVD L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD +
Sbjct: 285 GYTFQAVDALITNFHLPKSTLIMLVSALSDRTKILAAYNHAVEEQYRFFSFGDAMFI 341
>gi|149011658|ref|ZP_01832854.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP19-BS75]
gi|147764089|gb|EDK71021.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP19-BS75]
Length = 342
Score = 471 bits (1212), Expect = e-131, Method: Composition-based stats.
Identities = 151/358 (42%), Positives = 207/358 (57%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETG---EMQDKHFHSIIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLE-VLESLGEMPLPPYIHEKLD----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKKNGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD+ ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDSMFIY 342
>gi|302391490|ref|YP_003827310.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Acetohalobium arabaticum DSM 5501]
gi|302203567|gb|ADL12245.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Acetohalobium arabaticum DSM 5501]
Length = 341
Score = 471 bits (1212), Expect = e-131, Method: Composition-based stats.
Identities = 135/357 (37%), Positives = 203/357 (56%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD+DLP IA +P PRD ++LMV+ I + + + + D +V
Sbjct: 1 MKVSDFDYDLPEELIAQQPAEPRDESQLMVLDRKTG---EIKERIFKKIIDLIEPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G + + ++ L ++W V RP + +K G + F
Sbjct: 58 LNNTEVIPARLYGKK----EKTGGKVEFLLLTETELDTWEVLVRPGRKVKIGTRVVFGDN 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D L A V D+ + G ++ F G+ + +G +PLPPYI + + + Y
Sbjct: 114 D----LIAEVKDRTDFGGRVVEFEYKGV-FAEVLDKLGEMPLPPYITK----ELEERNQY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +G+ AAPTAGLHFT +L +L G+ + +TLHVG GTF PV+ ++ ++H M
Sbjct: 165 QTVYAQKKGAAAAPTAGLHFTEEVLEQLEEKGVNIAAITLHVGLGTFRPVRADEVEEHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + A +N K GGRI++VGTT R LET ++G + G+T+IFI PG
Sbjct: 225 HAEYYEVTDKAADTINQTKESGGRIIAVGTTVTRTLETVGNKEGYVEADKGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+ +D L++NFHLP+STL+M+V+AF G ++ YQ AI YRFYS+GD L+
Sbjct: 285 YEFKVIDGLLTNFHLPESTLIMMVTAFAGYDKVMAAYQEAIDKEYRFYSFGDAMLII 341
>gi|116627427|ref|YP_820046.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus thermophilus LMD-9]
gi|122267975|sp|Q03LS2|QUEA_STRTD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|116100704|gb|ABJ65850.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Streptococcus thermophilus LMD-9]
gi|312277945|gb|ADQ62602.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (Queuine
synthetase) [Streptococcus thermophilus ND03]
Length = 347
Score = 471 bits (1212), Expect = e-131, Method: Composition-based stats.
Identities = 158/359 (44%), Positives = 214/359 (59%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF+LP IA P+ RD+++L+V+ P ++D + LN DA+V
Sbjct: 1 MNTNDFDFELPEELIAQTPLEQRDASKLLVIDPVTR---EMTDTHFDHIIDQLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLYGEK----TDTHGHVEFLLLKNTQGDQWEVLAKPAKRLKVGAKVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV + + G ++ FS GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVTKELDHGGRIVEFSYDGIFLE-VLESLGEMPLPPYIHEK----LEDRDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTPELLQKIEAKGVKLVYLTLHVGLGTFRPVSVDNVDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A LNSVK+ GGRIV+VGTTS+R LET + DG + SG+TNIFI P
Sbjct: 225 HSEFYTLSQEAADTLNSVKAAGGRIVAVGTTSIRTLETIGNKYDGQLQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
GY+F VD +NFHLPKSTL+MLVSAF G E + Y+HA+ YRF+S+GD + +
Sbjct: 285 GYQFTVVDAFSTNFHLPKSTLVMLVSAFAGREFVLEAYKHAVQERYRFFSFGDAMFVTR 343
>gi|225859181|ref|YP_002740691.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae 70585]
gi|225720571|gb|ACO16425.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae 70585]
Length = 342
Score = 471 bits (1212), Expect = e-131, Method: Composition-based stats.
Identities = 151/358 (42%), Positives = 206/358 (57%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETG---EMQDKHFHSIINMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLE-VLESLGEMPLPPYIHEKLD----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKKNGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|229013635|ref|ZP_04170766.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
mycoides DSM 2048]
gi|228747694|gb|EEL97566.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
mycoides DSM 2048]
Length = 354
Score = 471 bits (1212), Expect = e-131, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 204/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L D +V
Sbjct: 5 MDINLFDFHLPEELIAQIPLEERETSRLMVLDRETGD---IEHKHFTDILSYLQEGDCLV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 62 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLIKPAKRVKEGTVISF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT I + G L FS GI + +G +PLPPYI D Y
Sbjct: 115 -GEGKLKATCIGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKE----TLEDRDRY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+ + F+TLHVG GTF PV + ++H M
Sbjct: 169 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVGLAFITLHVGLGTFRPVSADTIEEHHM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET T++ G + SG+T+IF+ P
Sbjct: 229 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDNSGKLCAASGWTDIFMYP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 289 GYEFKAIDGLITNFHLPKSTLIMLVSAFSNRDNVLHAYNEAVKEKYRFFSFGDAMFV 345
>gi|322389159|ref|ZP_08062720.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus parasanguinis ATCC 903]
gi|321144064|gb|EFX39481.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus parasanguinis ATCC 903]
Length = 342
Score = 471 bits (1212), Expect = e-131, Method: Composition-based stats.
Identities = 154/357 (43%), Positives = 206/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD+++L+++ D + L DA+V
Sbjct: 1 MNTNDFDFDLPEELIAQTPLEKRDASKLLILDRKTG---QFQDRHFDAILDELEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L+GV+ + L + W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLHGVK----PETGGHVEFLLLKNTQDDCWEVLAKPAKRLKVGATVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV ++ G ++ F GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVEEELEHGGRIVRFHYQGIFLE-VLESLGEMPLPPYIHEKLA----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+ + ++TLHVG GTF PV V++ +DH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTQELLQKIEAKGVHLVYLTLHVGLGTFRPVSVDNLEDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L VK+ G RIV+VGTTS+R LET + DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRQVKAAGKRIVAVGTTSIRTLETIGNKFDGDIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY ++ VD +NFHLPKSTL+MLVSAF G E T + Y HAI YRF+S+GD +
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELTLEAYHHAIQERYRFFSFGDAMFI 341
>gi|194397598|ref|YP_002038064.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae G54]
gi|226713852|sp|B5E5S4|QUEA_STRP4 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|194357265|gb|ACF55713.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae G54]
Length = 342
Score = 471 bits (1212), Expect = e-131, Method: Composition-based stats.
Identities = 151/358 (42%), Positives = 206/358 (57%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETG---EMQDKHFHSIIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDXWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLE-VLESLGEMPLPPYIHEKLD----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|296876827|ref|ZP_06900875.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus parasanguinis ATCC 15912]
gi|296432329|gb|EFH18128.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus parasanguinis ATCC 15912]
Length = 342
Score = 471 bits (1212), Expect = e-131, Method: Composition-based stats.
Identities = 154/357 (43%), Positives = 206/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD+++L+++ D + L DA+V
Sbjct: 1 MNTNDFDFDLPEELIAQTPLEKRDASKLLILDRKTGK---FQDRHFDAILDELEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L+GV+ + L + W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLHGVK----PETGGHVEFLLLKNTQDDCWEVLAKPAKRLKVGATVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV ++ G ++ F GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVEEELEHGGRIVRFHYQGIFLE-VLESLGEMPLPPYIHEKLA----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+ + ++TLHVG GTF PV V++ +DH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTQELLQKIEAKGVHLVYLTLHVGLGTFRPVSVDNLEDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L VK+ G RIV+VGTTS+R LET + DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRQVKAAGKRIVAVGTTSIRTLETIGNKFDGDIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY ++ VD +NFHLPKSTL+MLVSAF G E T + Y HAI YRF+S+GD +
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELTLEAYHHAIQERYRFFSFGDAMFI 341
>gi|148989540|ref|ZP_01820899.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP6-BS73]
gi|149007314|ref|ZP_01830972.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP18-BS74]
gi|149019372|ref|ZP_01834734.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP23-BS72]
gi|168493320|ref|ZP_02717463.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae CDC3059-06]
gi|221232156|ref|YP_002511309.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae ATCC 700669]
gi|303254571|ref|ZP_07340675.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae BS455]
gi|303259012|ref|ZP_07344991.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP-BS293]
gi|303261696|ref|ZP_07347643.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP14-BS292]
gi|303264365|ref|ZP_07350285.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae BS397]
gi|303265836|ref|ZP_07351733.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae BS457]
gi|303268169|ref|ZP_07353968.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae BS458]
gi|307127015|ref|YP_003879046.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae 670-6B]
gi|147761118|gb|EDK68086.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP18-BS74]
gi|147925083|gb|EDK76164.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP6-BS73]
gi|147931242|gb|EDK82221.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP23-BS72]
gi|183576547|gb|EDT97075.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae CDC3059-06]
gi|220674617|emb|CAR69180.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae ATCC 700669]
gi|301802157|emb|CBW34894.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae INV200]
gi|302598539|gb|EFL65581.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae BS455]
gi|302637276|gb|EFL67764.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP14-BS292]
gi|302639955|gb|EFL70411.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP-BS293]
gi|302642248|gb|EFL72596.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae BS458]
gi|302644571|gb|EFL74821.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae BS457]
gi|302646177|gb|EFL76404.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae BS397]
gi|306484077|gb|ADM90946.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae 670-6B]
gi|332074739|gb|EGI85213.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae GA17545]
Length = 342
Score = 471 bits (1212), Expect = e-131, Method: Composition-based stats.
Identities = 151/358 (42%), Positives = 206/358 (57%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETG---EMQDKHFHSIIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLE-VLESLGEMPLPPYIHEKLD----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|229071926|ref|ZP_04205137.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus F65185]
gi|228711222|gb|EEL63186.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus F65185]
Length = 350
Score = 471 bits (1212), Expect = e-131, Method: Composition-based stats.
Identities = 148/357 (41%), Positives = 205/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI D Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKE----TLEDRDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVQLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNAAVKEKYRFFSFGDAMFV 341
>gi|222097863|ref|YP_002531920.1| s-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Q1]
gi|254764266|sp|B9IYZ2|QUEA_BACCQ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|221241921|gb|ACM14631.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queuosine
biosynthesis protein queA) [Bacillus cereus Q1]
Length = 350
Score = 471 bits (1212), Expect = e-130, Method: Composition-based stats.
Identities = 148/357 (41%), Positives = 205/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDPGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI D Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKE----TLEDRDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVELAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGDAMFV 341
>gi|282850102|ref|ZP_06259484.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Veillonella
parvula ATCC 17745]
gi|282580291|gb|EFB85692.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Veillonella
parvula ATCC 17745]
Length = 341
Score = 470 bits (1211), Expect = e-130, Method: Composition-based stats.
Identities = 151/356 (42%), Positives = 207/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD++LP IA PV PRD+ARL+ + DL L+ D +V
Sbjct: 1 MKVTDFDYELPEELIAQHPVEPRDTARLLTLDKVSGEVK--HKGHFYDLLEELHEGDVLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L G R ++ L N W +P K G ++ F
Sbjct: 59 FNNTKVIPARLYGHR----QGSGGKVEVLLLTPCGENRWECLVKPGKKCPIGQVIEF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
RL +IDK N G ++ F+ +G+ + I +G +PLPPYI K D Y
Sbjct: 112 --DDRLSGVIIDKTNFGGRIIQFTCNGV-FDDVIQEIGEMPLPPYIHEK----LEDKDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT +LL ++ + G+++ FVTLHVG GTF PV E +DH M
Sbjct: 165 QTVYAKEKGSAAAPTAGLHFTPDLLEKIKAKGVELEFVTLHVGLGTFRPVSAETIEDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA +N+ K +G RI++VGTTS+R LE+AT +DG++ SG+T IFI PG
Sbjct: 225 HSEFFVVPQDTANRINAAKQKGSRIIAVGTTSVRTLESATNDDGVLQGMSGWTQIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ +D L++NFHLP+STLLML+SA E Y+ A+ YRF+S+GD +
Sbjct: 285 YKFKMIDALVTNFHLPQSTLLMLISALASREHCLAAYEEAVRERYRFFSFGDAMFI 340
>gi|217964322|ref|YP_002350000.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes HCC23]
gi|254764281|sp|B8DHL7|QUEA_LISMH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|217333592|gb|ACK39386.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes HCC23]
gi|307571112|emb|CAR84291.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes L99]
Length = 342
Score = 470 bits (1211), Expect = e-130, Method: Composition-based stats.
Identities = 156/357 (43%), Positives = 221/357 (61%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++LN DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKESGD---IKDQHFTDIISYLNEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G++ + I L + N+W +P+K I+KG + F
Sbjct: 58 LNDTRVLPARLHGIK----DETGAHIEVLLLKQKEGNAWETLVKPAKRIRKGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+AT +++ G +L FS GI + +G +PLPPYI + D Y
Sbjct: 111 -GDGALKATCLEELEHGGRILEFSYEGI-FYEVLEQLGEMPLPPYIKEQLA----DQDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEDLLAKISAKGVEIIFVTLHVGLGTFRPVDVEDTANHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + +A+ +N +K +GG++V+VGTTS+R LET A+ DG + SG+T IFI+P
Sbjct: 225 HSEFYRLTEESAERINKIKVQGGKVVAVGTTSIRTLETIASRHDGKLVAESGWTEIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+AVD L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD +
Sbjct: 285 GYTFQAVDALITNFHLPKSTLIMLVSALSDRTKILAAYNHAVEQQYRFFSFGDAMFI 341
>gi|228981109|ref|ZP_04141410.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis Bt407]
gi|228778650|gb|EEM26916.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis Bt407]
gi|326942199|gb|AEA18095.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar chinensis CT-43]
Length = 350
Score = 470 bits (1211), Expect = e-130, Method: Composition-based stats.
Identities = 148/357 (41%), Positives = 205/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEDRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI D Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKE----TLEDRDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVQLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETATLLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGDAMFV 341
>gi|228941586|ref|ZP_04104134.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar berliner ATCC 10792]
gi|228974515|ref|ZP_04135082.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228785232|gb|EEM33244.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228818093|gb|EEM64170.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar berliner ATCC 10792]
Length = 354
Score = 470 bits (1211), Expect = e-130, Method: Composition-based stats.
Identities = 148/357 (41%), Positives = 205/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 5 MDINLFDFHLPEELIAQVPLEDRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 62 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI D Y
Sbjct: 115 -GEGKLKATCTGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKE----TLEDRDRY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 169 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVQLAFITLHVGLGTFRPVSADTIEEHHM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 229 HAEYYHMSEETATLLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 289 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGDAMFV 345
>gi|229198546|ref|ZP_04325249.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus m1293]
gi|228584931|gb|EEK43046.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus m1293]
gi|324328321|gb|ADY23581.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar finitimus YBT-020]
Length = 350
Score = 470 bits (1211), Expect = e-130, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 205/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI D Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKE----TLEDRDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVELAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN V+ GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVRENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGDAMFV 341
>gi|307706877|ref|ZP_07643679.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus mitis SK321]
gi|307617750|gb|EFN96915.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus mitis SK321]
Length = 342
Score = 470 bits (1211), Expect = e-130, Method: Composition-based stats.
Identities = 149/358 (41%), Positives = 208/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D+ + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETG---EMQDNHFHSIIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L + + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQK----EETGGHVELLLLKNTAGDEWEVLAKPAKRLKVGTRVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLE-VLESLGEMPLPPYIHEKLD----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK G R+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGSRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G + YQHAI+ YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRDLVLDAYQHAINERYRFFSFGDAMFIY 342
>gi|315221824|ref|ZP_07863736.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus anginosus F0211]
gi|315189057|gb|EFU22760.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus anginosus F0211]
Length = 342
Score = 470 bits (1211), Expect = e-130, Method: Composition-based stats.
Identities = 154/357 (43%), Positives = 212/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD++RL+VV+ + D + LN DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASRLLVVNHETG---QMEDTHFDAIIDQLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G + + L ++ + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLHGEK----PETGGHVELLLLKNIAGDDWEVLAKPAKRLKVGAAISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+++ G + F GI LE + +G +PLPPYI K +D Y
Sbjct: 111 -GDGRLTATVLEELEHGGRTVRFHYQGIFLE-VLESLGEMPLPPYIHEK----LKDRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+++ + G+K+ ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTKELLAQIEAKGVKLVYLTLHVGLGTFRPVSVDNVDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L VK+ G R+V+VGTTS+R LET ++ +G I SG+TNIFI P
Sbjct: 225 HSEFYTLSEEAANTLRQVKASGHRVVAVGTTSIRTLETIGSKFNGEIKADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY ++ VD +NFHLPKSTL+MLVSAF G E YQHAI YRF+S+GD +
Sbjct: 285 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLSAYQHAIDEKYRFFSFGDAMFI 341
>gi|229163366|ref|ZP_04291318.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus R309803]
gi|228620147|gb|EEK77021.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus R309803]
Length = 354
Score = 470 bits (1211), Expect = e-130, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 205/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLM++ I +D+ ++L+ D +V
Sbjct: 5 MDINLFDFHLPEELIAQVPLEERETSRLMMLDRETGD---IEHKHFTDILSYLHEGDCLV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 62 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI D Y
Sbjct: 115 -GEGKLKATCTGMADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKE----TLEDRDRY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 169 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVELAFITLHVGLGTFRPVSADTIEEHHM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 229 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 289 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGDAMFV 345
>gi|325479477|gb|EGC82573.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Anaerococcus prevotii ACS-065-V-Col13]
Length = 340
Score = 470 bits (1211), Expect = e-130, Method: Composition-based stats.
Identities = 145/356 (40%), Positives = 207/356 (58%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++FD+ LP IA P RD AR+MV+ I + D+ +LN D +V
Sbjct: 1 MKTEDFDYYLPEDLIAQHPSDKRDEARMMVLDKKTG---EICNKYFYDVIDYLNPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G R + +++ I L + W V RP K +K G + F +
Sbjct: 58 MNDTRVIPARLFGHR----DGKDESIEVFLLHNIEGKKWEVLVRPGKKMKIGTEVIFSDE 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A VID G ++ FS +GI + +G +PLPPYI K +D +Y
Sbjct: 114 -----LSAKVIDIKEDGNRVVEFSYAGI-FNEILDKLGNVPLPPYIKEK----LKDPEEY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GSVAAPTAGLHFT +LL ++ G+K+ F+TL+VG GTF PV ED DH M
Sbjct: 164 QTVYSKNPGSVAAPTAGLHFTKDLLKKIEEKGVKLAFLTLNVGLGTFRPVNEEDITDHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ TA+ +N K +I++VGTTS+R LE+ + G I SG+T+IFI PG
Sbjct: 224 HSEFYTLNKETAEIINQAKKNNKKIIAVGTTSIRTLESVYKKCGEIREDSGWTDIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ ++ VD +++NFHLPKSTL+MLV+AF + Y +A+ YRF+S+GD L+
Sbjct: 284 FEYKVVDSVITNFHLPKSTLIMLVAAFTSKDIILNAYNYAVKEKYRFFSFGDCMLI 339
>gi|46907759|ref|YP_014148.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes str. 4b F2365]
gi|67460874|sp|Q71ZD9|QUEA_LISMF RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|46881028|gb|AAT04325.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes serotype 4b str. F2365]
Length = 342
Score = 470 bits (1211), Expect = e-130, Method: Composition-based stats.
Identities = 154/357 (43%), Positives = 220/357 (61%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++LN DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKKSGD---IKDQHFTDIISYLNEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G++ + I L + N+W +P+K I+KG + F
Sbjct: 58 LNDTRVLPARLHGIK----DETGAHIEVLLLKQKEGNAWETLVKPAKRIRKGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A +++ G +L FS GI + +G +PLPPYI + D Y
Sbjct: 111 -GDGALKAICLEELEHGGRILEFSYEGI-FYEVLEQLGEMPLPPYIKEQLA----DQDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y K GS AAPTAGLHFT +LL+++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYGKENGSAAAPTAGLHFTEDLLAKISAKGVEIIFVTLHVGLGTFRPVDVEDTTNHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + +A+ +N +K++GG++V+VGTTS+R LET A+ DG + SG+T IFI+P
Sbjct: 225 HSEFYRLTEESAERINKIKAQGGKVVAVGTTSIRTLETIASRHDGKLVAESGWTEIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+AVD L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD +
Sbjct: 285 GYTFQAVDALITNFHLPKSTLIMLVSALSDRTKILAAYNHAVEEQYRFFSFGDAMFI 341
>gi|306824944|ref|ZP_07458287.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sp. oral taxon 071 str. 73H25AP]
gi|304432771|gb|EFM35744.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sp. oral taxon 071 str. 73H25AP]
Length = 342
Score = 470 bits (1211), Expect = e-130, Method: Composition-based stats.
Identities = 151/358 (42%), Positives = 208/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETG---EMQDKHFHSIIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G ++F
Sbjct: 58 MNDTRVLPARLYGQK----EETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRVNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A + ++ G ++ F GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLSAVITEELTHGGRIVRFEYQGIFLE-VLESLGEMPLPPYIHEKLD----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGRI++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKEDGGRIIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G + YQHAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRDLVLDAYQHAIQERYRFFSFGDAMFIY 342
>gi|149002808|ref|ZP_01827734.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP14-BS69]
gi|237650471|ref|ZP_04524723.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae CCRI 1974]
gi|237821798|ref|ZP_04597643.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae CCRI 1974M2]
gi|147759102|gb|EDK66096.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP14-BS69]
Length = 342
Score = 470 bits (1211), Expect = e-130, Method: Composition-based stats.
Identities = 151/358 (42%), Positives = 207/358 (57%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETG---EMQDKHFHSIIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLE-VLESLGEMPLPPYIHEKLD----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD+ ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDSMFIY 342
>gi|86357735|ref|YP_469627.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhizobium
etli CFN 42]
gi|123511943|sp|Q2K8D6|QUEA_RHIEC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|86281837|gb|ABC90900.1| S-adenosylmethionine: tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis)protein [Rhizobium etli CFN 42]
Length = 361
Score = 470 bits (1211), Expect = e-130, Method: Composition-based stats.
Identities = 213/362 (58%), Positives = 256/362 (70%), Gaps = 6/362 (1%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRP PRDSARL+VV P+ +SDH V DLP+FL + DA+V
Sbjct: 1 MRVDLFDFDLPDERIALRPAEPRDSARLLVVDPD--AESALSDHHVCDLPSFLRAGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R +++S TLHMR+ P+ W +A+P K IK+GD + F
Sbjct: 59 FNDTKVIPAQLEGIRHR-DGAGGQQVSATLHMRIGPSRWKAFAKPGKRIKEGDRIAFGHS 117
Query: 121 DGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+ATV +K GE+ L F +SG L+ I+ VG IPLPPYIA KRP D RD
Sbjct: 118 GESCMIGSLDATVEEKGEAGEVTLAFDLSGPVLDEAIAAVGHIPLPPYIAAKRPEDERDR 177
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YA+ +G+VAAPTAGLHFT L L GI+ +FVTLHVGAGTF+PVK +DTDD
Sbjct: 178 ADYQTIYAREEGAVAAPTAGLHFTPALFEALDKAGIERHFVTLHVGAGTFLPVKADDTDD 237
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH E G++ A LN+VK+RGGRIV VGTTSLRL+E+A E G I PW+G T IFI
Sbjct: 238 HKMHLESGYVSGEIAAGLNAVKARGGRIVCVGTTSLRLIESAAGESGEIKPWAGATGIFI 297
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRF+AVD+LM+NFHLP+STL MLVSAF G E Y+HAIS YRFYSYGD SLLF
Sbjct: 298 TPGYRFKAVDMLMTNFHLPRSTLFMLVSAFSGFETMHAAYKHAISTGYRFYSYGDASLLF 357
Query: 358 QK 359
+K
Sbjct: 358 RK 359
>gi|229032069|ref|ZP_04188051.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH1271]
gi|228729261|gb|EEL80256.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH1271]
Length = 350
Score = 470 bits (1210), Expect = e-130, Method: Composition-based stats.
Identities = 148/357 (41%), Positives = 205/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEDRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + ++W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDTWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI D Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKE----TLEDRDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+ + F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVGLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKESGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGDAMFV 341
>gi|222153368|ref|YP_002562545.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus uberis 0140J]
gi|222114181|emb|CAR42709.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus uberis 0140J]
Length = 342
Score = 470 bits (1210), Expect = e-130, Method: Composition-based stats.
Identities = 161/357 (45%), Positives = 215/357 (60%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RDS+RL+++ ++D + LN DA+V
Sbjct: 1 MHTNDFDFDLPEELIAQTPLEKRDSSRLLIIDHQT---KEMTDSHFDQIVDQLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L+G + + L + W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLHGEK----PDTHGHVELLLLKNTKEDQWEVLAKPAKRLKVGSKVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATVI++ + G ++ FS SGI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVIEELDHGGRIVEFSYSGIFLE-VLESLGEMPLPPYIHEK----LEDSERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ G+ + ++TLHVG GTF PV V+ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEALLKKIKDKGVHLVYLTLHVGLGTFRPVSVDSVDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ GGR+V+VGTTS+R LET T+ DG I SG+TNIFI P
Sbjct: 225 HSEFYHLSEEAAQTLRQVKANGGRLVAVGTTSIRTLETIGTKFDGDIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ VD +NFHLPKSTL+MLVSAF G E + YQHA++ YRF+S+GD +
Sbjct: 285 GYQFKVVDAFSTNFHLPKSTLVMLVSAFAGREFVLEAYQHAVNEKYRFFSFGDAMFV 341
>gi|228954702|ref|ZP_04116725.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar kurstaki str. T03a001]
gi|228805029|gb|EEM51625.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar kurstaki str. T03a001]
Length = 350
Score = 470 bits (1210), Expect = e-130, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 205/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI D Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKE----TLEDRDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVQLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT +G + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHEGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGDAMFV 341
>gi|229062113|ref|ZP_04199438.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH603]
gi|229169161|ref|ZP_04296876.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH621]
gi|228614389|gb|EEK71499.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH621]
gi|228717265|gb|EEL68940.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH603]
Length = 354
Score = 470 bits (1210), Expect = e-130, Method: Composition-based stats.
Identities = 148/357 (41%), Positives = 203/357 (56%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L D +V
Sbjct: 5 MDINLFDFHLPEELIAQIPLEERETSRLMVLDRETGD---IEHKHFTDILSYLQEGDCLV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 62 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLIKPAKRVKEGTVISF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT I + G L FS GI + +G +PLPPYI D Y
Sbjct: 115 -GEGKLKATCIGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKE----TLEDRDRY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+ + F+TLHVG GTF PV + ++H M
Sbjct: 169 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVGLAFITLHVGLGTFRPVSADTIEEHHM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT G + SG+T+IF+ P
Sbjct: 229 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHSGKLCAASGWTDIFMYP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 289 GYEFKAIDGLITNFHLPKSTLIMLVSAFSNRDNVLHAYNEAVKEKYRFFSFGDAMFV 345
>gi|229081682|ref|ZP_04214177.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock4-2]
gi|229152621|ref|ZP_04280810.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus m1550]
gi|228630882|gb|EEK87522.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus m1550]
gi|228701686|gb|EEL54177.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock4-2]
Length = 354
Score = 470 bits (1210), Expect = e-130, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 205/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 5 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 62 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI D Y
Sbjct: 115 -GEGKLKATCTGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKE----TLEDRDRY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 169 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVQLAFITLHVGLGTFRPVSADTIEEHHM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT +G + SG+T+IF+ P
Sbjct: 229 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHEGKLCAASGWTDIFMYP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 289 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGDAMFV 345
>gi|229019642|ref|ZP_04176452.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH1273]
gi|229025880|ref|ZP_04182276.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH1272]
gi|228735432|gb|EEL86031.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH1272]
gi|228741645|gb|EEL91835.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH1273]
Length = 350
Score = 470 bits (1210), Expect = e-130, Method: Composition-based stats.
Identities = 148/357 (41%), Positives = 206/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEDRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + ++W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDTWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI D Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKE----TLEDRDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVQLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAVLLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFSNRDNVLHAYNEAVKEKYRFFSFGDAMFV 341
>gi|229175092|ref|ZP_04302609.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus MM3]
gi|228608388|gb|EEK65693.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus MM3]
Length = 350
Score = 470 bits (1210), Expect = e-130, Method: Composition-based stats.
Identities = 148/357 (41%), Positives = 204/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEDRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI D Y
Sbjct: 111 -GEGKLKATCTGTADQGGRHLEFSYDGI-FYEILDELGEMPLPPYIKE----TLEDRDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+ + F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVGLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGDAMFV 341
>gi|225857051|ref|YP_002738562.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae P1031]
gi|225724890|gb|ACO20742.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae P1031]
Length = 342
Score = 470 bits (1210), Expect = e-130, Method: Composition-based stats.
Identities = 151/358 (42%), Positives = 206/358 (57%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETG---EMQDKHFHSIIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKM----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLE-VLESLGEMPLPPYIHEKLD----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|254724656|ref|ZP_05186439.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
anthracis str. A1055]
Length = 350
Score = 470 bits (1210), Expect = e-130, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 204/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI D Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKE----TLEDRDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y K GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYGKEIGSAAAPTAGLHFTEELLEKLKQKGVELAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGDAMFV 341
>gi|228923170|ref|ZP_04086461.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
gi|228836549|gb|EEM81899.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
Length = 350
Score = 470 bits (1210), Expect = e-130, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 205/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEDRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI D Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKE----TLEDRDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVQLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT +G + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHEGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGDAMFV 341
>gi|301794456|emb|CBW36890.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae INV104]
Length = 342
Score = 470 bits (1210), Expect = e-130, Method: Composition-based stats.
Identities = 151/358 (42%), Positives = 207/358 (57%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETG---EMQDKHFHSIINMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLE-VLESLGEMPLPPYIHEKLD----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD+ ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDSMFIY 342
>gi|160947141|ref|ZP_02094308.1| hypothetical protein PEPMIC_01073 [Parvimonas micra ATCC 33270]
gi|158446275|gb|EDP23270.1| hypothetical protein PEPMIC_01073 [Parvimonas micra ATCC 33270]
Length = 347
Score = 470 bits (1209), Expect = e-130, Method: Composition-based stats.
Identities = 147/360 (40%), Positives = 206/360 (57%), Gaps = 16/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +FDF+L S IA P+ R S++L+VV+ + ++ ++ +D +V
Sbjct: 4 LKTDDFDFELDESLIAQFPLKDRSSSKLLVVNRE---NFDLEHKNFKNIVDYIKKDDVLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G R +++ I L + N+W +P K +K G + F
Sbjct: 61 INDTKVIPARLFGAR----PGKDEAIEVLLLKKHDDNTWETLVKPGKKMKIGSKVEF--- 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L V+ GE + FS GI E + +GT+PLPPYI K ++ RD Y
Sbjct: 114 -GNGKLLGEVVGISEEGERFVKFSYDGI-FEEILDELGTMPLPPYIHEK--LEERD--RY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL L G+K+ VTLHVG GTF PVKV++ +H M
Sbjct: 168 QTVYAKHNGSAAAPTAGLHFTDELLKELQEKGVKIARVTLHVGLGTFRPVKVDNVLEHKM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I + + +NS K +G RI +VGTTS+R LET + G + G T+IFI PG
Sbjct: 228 HDEYYEISEESVEIINSAKEKGNRIFAVGTTSVRTLETVYKKYGELVACKGNTDIFIYPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
+ F+ VD L++NFHLPKSTL+MLVSAF E Y A + YRF+S+GD L+ +++
Sbjct: 288 FEFKVVDCLITNFHLPKSTLIMLVSAFASKEIIMNAYNEATKNKYRFFSFGDAMLIKKEK 347
>gi|325293064|ref|YP_004278928.1| S-adenosylmethionine tRNA ribosyltransferase [Agrobacterium sp.
H13-3]
gi|325060917|gb|ADY64608.1| S-adenosylmethionine tRNA ribosyltransferase [Agrobacterium sp.
H13-3]
Length = 374
Score = 470 bits (1209), Expect = e-130, Method: Composition-based stats.
Identities = 223/363 (61%), Positives = 265/363 (73%), Gaps = 8/363 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP + IALRP PRDSARL+VV PN + D +VSDL +FL DA+V
Sbjct: 15 MRVDLFDFDLPEANIALRPANPRDSARLLVVDPNAD---HMEDRIVSDLTSFLKPGDALV 71
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI AQL GVR E +S TLHMR + W +ARP K IK+GD + F +
Sbjct: 72 FNDTRVIPAQLEGVRLREGAP-ETAVSATLHMRADQSRWKAFARPGKRIKQGDRIRFGYE 130
Query: 121 D----GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
G + LEATV +K GEI L+F +SG L+ I+ VG IPLPPYIA KRP DA+D
Sbjct: 131 RDNACGLAHLEATVEEKGEEGEITLLFDVSGPVLDEAIASVGHIPLPPYIAAKRPEDAQD 190
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT YA+ +G+VAAPTAGLHFT +L + L GI+ +FVTLHVGAGTF+PVK +DTD
Sbjct: 191 QTDYQTIYAREKGAVAAPTAGLHFTPDLFAALDEAGIERHFVTLHVGAGTFLPVKADDTD 250
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
DH MH EIG + TA LN+VK+RGGRIVSVGTTSLRL+E+AT E+G+I PWSG T IF
Sbjct: 251 DHKMHFEIGHVSQETAAKLNAVKARGGRIVSVGTTSLRLIESATDENGVIQPWSGATGIF 310
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFRAVDILM+NFHLPKSTL MLVSAFCG+E + Y HAI YRFYSYGD+SLL
Sbjct: 311 ITPGYRFRAVDILMTNFHLPKSTLFMLVSAFCGLETMRAAYAHAIETGYRFYSYGDSSLL 370
Query: 357 FQK 359
F+K
Sbjct: 371 FRK 373
>gi|312867272|ref|ZP_07727482.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus parasanguinis F0405]
gi|311097401|gb|EFQ55635.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus parasanguinis F0405]
Length = 342
Score = 470 bits (1209), Expect = e-130, Method: Composition-based stats.
Identities = 154/357 (43%), Positives = 206/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RD+++L+++ D + L DA+V
Sbjct: 1 MNTNDFDFDLPEELIAQTPLEKRDASKLLILDRKTG---QFQDRHFDAILDELEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L+GV+ + L + W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLHGVK----PETGGHVEFLLLKNTQDDCWEVLAKPAKRLKVGATVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV ++ G ++ F GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVEEELEHGGRIVHFHYQGIFLE-VLESLGEMPLPPYIHEKLA----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+ + ++TLHVG GTF PV V++ +DH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTQELLQKIEAKGVHLVYLTLHVGLGTFRPVSVDNLEDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L VK+ G RIV+VGTTS+R LET + DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRQVKAAGKRIVAVGTTSIRTLETIGNKFDGDIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY ++ VD +NFHLPKSTL+MLVSAF G E T + Y HAI YRF+S+GD +
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELTLEAYHHAIQERYRFFSFGDAMFI 341
>gi|307709512|ref|ZP_07645968.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus mitis SK564]
gi|307619731|gb|EFN98851.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus mitis SK564]
Length = 342
Score = 470 bits (1209), Expect = e-130, Method: Composition-based stats.
Identities = 152/358 (42%), Positives = 207/358 (57%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + + D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRDTG---EMQDKHFHSIIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQK----EETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLE-VLESLGEMPLPPYIHEKLD----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGRI++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAASTLRSVKENGGRIIAVGTTSIRTLETVGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|23099489|ref|NP_692955.1| S-adenosylmethionine-tRNA ribosyltransferase-isomerase
[Oceanobacillus iheyensis HTE831]
gi|38372491|sp|Q8EPQ8|QUEA_OCEIH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|22777718|dbj|BAC13990.1| S-adenosylmethionine-tRNA ribosyltransferase-isomerase
[Oceanobacillus iheyensis HTE831]
Length = 342
Score = 470 bits (1209), Expect = e-130, Method: Composition-based stats.
Identities = 150/358 (41%), Positives = 209/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++FDF LP IA P+ R S+RL V+ S I+ D+ +L + D +V
Sbjct: 1 MQIEDFDFHLPEELIAQTPLKDRTSSRLCVLDKQTS---EITHRSFKDITTYLQAGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L GV+ + +I L + ++W V +P+K +K G + F
Sbjct: 58 LNDTKVLPARLYGVK----SDTGAKIEVLLLHQQEEDTWEVLVKPAKKVKVGTEIIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L+AT ID + G ++ FS +GI + +G +PLPPYI + P Y
Sbjct: 111 -GNGKLKATCIDLKDHGGRIMTFSYTGI-FYEILDQLGEMPLPPYIKEQLPEQD----RY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL + ++G+ + FVTLHVG GTF PV V+ +DH M
Sbjct: 165 QTVYAKEKGSAAAPTAGLHFTDKLLEDIKAMGVNIVFVTLHVGLGTFRPVSVDSVEDHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-EDGIINPWSGFTNIFITP 299
HSE + A+ LN K+ G RI+SVGTTS R LET DG G+T+IFI P
Sbjct: 225 HSEFYSMSESAAKTLNEAKAAGRRIISVGTTSTRTLETIVRDHDGKFVATRGWTDIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+FRA+D L++NFHLPKSTL+M++SA G E Y A+ YRF+S+GD L+
Sbjct: 285 PYKFRAIDGLITNFHLPKSTLIMMISALAGKEAILHAYNEAVKEEYRFFSFGDAMLIL 342
>gi|315303291|ref|ZP_07873926.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
ivanovii FSL F6-596]
gi|313628338|gb|EFR96836.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
ivanovii FSL F6-596]
Length = 342
Score = 470 bits (1209), Expect = e-130, Method: Composition-based stats.
Identities = 155/357 (43%), Positives = 219/357 (61%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++L+ DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKATG---EIKDQHFTDILSYLHEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G++ + I L + N+W +P+K I++G + F
Sbjct: 58 LNDTRVLPARLHGIK----DETGAHIEVLLLKQKEGNTWEALVKPAKRIRQGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+AT +++ G +L FS GI + +G +PLPPYI + D Y
Sbjct: 111 -GDGALQATCLEELEHGGRILEFSYEGI-FYEVLEQLGEMPLPPYIKEQLA----DQDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEDLLAKIKEKGVEIIFVTLHVGLGTFRPVDVEDTTNHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + A+ +N VK GG++++VGTTS+R LET A+ +G I SG+T+IFI+P
Sbjct: 225 HSEFYRLTEEAAERINRVKETGGKVIAVGTTSIRTLETIASRHEGNIVAESGWTDIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY FRAVD L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD +
Sbjct: 285 GYTFRAVDALITNFHLPKSTLIMLVSALSDRNKILTAYNHAVEEQYRFFSFGDAMFI 341
>gi|146318286|ref|YP_001197998.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Streptococcus suis 05ZYH33]
gi|146320479|ref|YP_001200190.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Streptococcus suis 98HAH33]
gi|145689092|gb|ABP89598.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Streptococcus suis 05ZYH33]
gi|145691285|gb|ABP91790.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Streptococcus suis 98HAH33]
gi|292558081|gb|ADE31082.1| Queuosine biosynthesis protein [Streptococcus suis GZ1]
Length = 344
Score = 470 bits (1209), Expect = e-130, Method: Composition-based stats.
Identities = 160/357 (44%), Positives = 212/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RDS++L+++ + D + LN DA+V
Sbjct: 3 MNTADFDFDLPEELIAQVPLEKRDSSKLLILDREKRS---MVDSHFDHIIDQLNPGDALV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K +K G + F
Sbjct: 60 MNNTRVLPARLYGYK----PETMGHVELLLLKNTQGDQWEVLAKPAKRLKVGTTVAF--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL AT++++ G ++ FS GI LE + +G +PLPPYI K D Y
Sbjct: 113 -GDGRLTATIVEELEHGGRIVEFSYEGIFLE-VLESLGEMPLPPYIHEK----LEDRERY 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ D+H M
Sbjct: 167 QTVYAKENGSAAAPTAGLHFTQELLEKIEAKGVKLVYLTLHVGLGTFRPVSVDNVDEHEM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A AQ LN VK GGRIV+VGTTS+R LET + DG + SG+TNIFI P
Sbjct: 227 HSEFYNLSAEAAQTLNQVKDSGGRIVAVGTTSIRTLETIGNKFDGRLQADSGWTNIFIKP 286
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY FR VD +NFHLPKSTL+MLVSAF G E T Y+HA+ YRF+S+GD +
Sbjct: 287 GYTFRIVDAFSTNFHLPKSTLVMLVSAFAGREFTLDAYKHAVEERYRFFSFGDAMFI 343
>gi|194017396|ref|ZP_03056008.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
pumilus ATCC 7061]
gi|194011264|gb|EDW20834.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
pumilus ATCC 7061]
Length = 342
Score = 469 bits (1208), Expect = e-130, Method: Composition-based stats.
Identities = 146/357 (40%), Positives = 207/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++ FDFDLP IA P+ RD++RLMV++ I S + + + D +V
Sbjct: 1 MKLELFDFDLPERLIAQVPLEKRDASRLMVLNKQTGA---IKHDTFSQITDYFQTGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ ++ L + + W +P+K +KKG ++ F
Sbjct: 58 LNNTRVLPARLFGMK----EDTGAKVELLLLKQEEGDKWETLVKPAKRVKKGTVITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A ++ G + F +GI + +G +PLPPYI + D Y
Sbjct: 111 -GDGRLQAVCTEELEHGGRKVEFQYTGI-FYEVLESLGEMPLPPYIKEQLD----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT+ LL L G+ + F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYSKEVGSAAAPTAGLHFTNELLDALKEKGVHIAFITLHVGLGTFRPVSADRIEEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E ++ TA LN V+ GGRI+SVGTTS R LET A+ DG SG+T+IFI P
Sbjct: 225 HAEFYEMNEETAAELNRVRKEGGRIISVGTTSTRTLETIASAHDGEFKASSGWTSIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D +++NFHLPKS+L+MLVSA G E K Y A+ YRF+S+GD L+
Sbjct: 285 GYTFKAIDGMITNFHLPKSSLIMLVSALAGREHVLKAYNEAVKEEYRFFSFGDAMLI 341
>gi|331266082|ref|YP_004325712.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus oralis Uo5]
gi|326682754|emb|CBZ00371.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus oralis Uo5]
Length = 346
Score = 469 bits (1208), Expect = e-130, Method: Composition-based stats.
Identities = 147/358 (41%), Positives = 206/358 (57%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 5 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETG---EMKDKHFHSIIDMLEPGDALV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G ++F
Sbjct: 62 MNDTRVLPARLYGQK----EETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGSRVNF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A + ++ G ++ F GI LE + +G +PLPPYI K D Y
Sbjct: 115 -GDGRLSAVITEELTHGGRIVRFEYQGIFLE-VLESLGEMPLPPYIHEKLD----DRERY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 169 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK G R+++VGTTS+R LET ++ +G I SG+TNIFI P
Sbjct: 229 HSEFYQLSEEAAATLRSVKENGSRVIAVGTTSIRTLETIGSKFNGQIQADSGWTNIFIKP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G + Y HAI YRF+S+GD ++
Sbjct: 289 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRDLVLDAYHHAIQERYRFFSFGDAMFIY 346
>gi|311031510|ref|ZP_07709600.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
sp. m3-13]
Length = 342
Score = 469 bits (1208), Expect = e-130, Method: Composition-based stats.
Identities = 142/357 (39%), Positives = 201/357 (56%), Gaps = 15/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV++ + + ++ D +V
Sbjct: 1 MKIDLFDFHLPEELIAQTPLEQREASRLMVLNKKTGNLT--HEPTFRSILDYVKEGDCLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L GV+ + +I L ++ ++W +P+K +K+G ++ F
Sbjct: 59 LNDTRVLPARLFGVK----SETGAKIEVLLLKQLEGDTWETLIKPAKRVKEGTVVSF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A + G L F GI + +G +PLPPYI + D Y
Sbjct: 112 -GDGRLTAICTGESEHGGRKLDFRYEGI-FYEVLDSLGEMPLPPYIKEQ----LEDRDRY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ GS AAPTAGLHFT LL L G+ F+TLHVG GTF PV V+ ++H M
Sbjct: 166 QTVFARETGSAAAPTAGLHFTEELLDALKDKGVHTAFITLHVGLGTFRPVSVDSVEEHDM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + TA+ LN V+S GGRI++VGTTS R LET + G SG+TNIFI PG
Sbjct: 226 HAEFYQMSEGTARLLNEVRSNGGRIITVGTTSTRTLETIARDHGEFKEASGWTNIFIYPG 285
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F A+D +++NFHLPKSTL+MLVSA G E Y+ A+ YRF+S+GD L+
Sbjct: 286 YNFSAIDGMITNFHLPKSTLIMLVSALAGRENVMHAYEEAVKERYRFFSFGDAMLIL 342
>gi|70726282|ref|YP_253196.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus haemolyticus JCSC1435]
gi|91207406|sp|Q4L6Y5|QUEA_STAHJ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|68447006|dbj|BAE04590.1| S-adenosylmethionine tRNA ribosyltransferase [Staphylococcus
haemolyticus JCSC1435]
Length = 341
Score = 469 bits (1208), Expect = e-130, Method: Composition-based stats.
Identities = 152/357 (42%), Positives = 211/357 (59%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V+EFD+DLP S IA P+ RD +RL+V+ N I D+ +L + D +V
Sbjct: 1 MNVEEFDYDLPESLIAQTPLKDRDQSRLLVLGRNSGN---IEHKHFKDVINYLETGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + R+ N W V +P+K IK G+ L F
Sbjct: 58 LNDTRVMPARLFGLK----EETGAKVEMLMLTRIENNDWEVLLKPAKRIKVGNKLSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ ++ A I++ + G ++ GI LE +++ +G +PLPPYI + D Y
Sbjct: 111 -GEGKIIAECIEELDQGGRIMRLHYEGI-LEERLNELGEMPLPPYIKERLD----DPDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + + GI + F+TLHVG GTF PV VED +DH M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTDELLDEIRAKGINIAFITLHVGLGTFRPVSVEDINDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN K G RI+SVGTTS R LET + SG+T+IFI PG
Sbjct: 225 HSEYYQMTQETANLLNQTKKEGHRIISVGTTSTRTLETIRRDYNEFVAVSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ ++A+D L++NFHLPKSTL+MLVSAF E Y+ A+ YRF+S+GD L+
Sbjct: 285 FTYKAIDGLITNFHLPKSTLVMLVSAFSSRENILNAYKEAVKLEYRFFSFGDAMLII 341
>gi|223933305|ref|ZP_03625294.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Streptococcus suis 89/1591]
gi|330832602|ref|YP_004401427.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Streptococcus suis ST3]
gi|223898035|gb|EEF64407.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Streptococcus suis 89/1591]
gi|329306825|gb|AEB81241.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Streptococcus suis ST3]
Length = 342
Score = 469 bits (1208), Expect = e-130, Method: Composition-based stats.
Identities = 161/357 (45%), Positives = 212/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RDS++L+++ + D + LN DA+V
Sbjct: 1 MNTADFDFDLPEELIAQVPLEKRDSSKLLILDREKQS---MVDSHFDHIIDQLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L N W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLYGYK----PETMGHVELLLLKNTQGNQWEVLAKPAKRLKVGTTVAF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL AT++++ G ++ FS GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATIVEELEHGGRIVEFSYEGIFLE-VLESLGEMPLPPYIHEK----LEDRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTQELLEKIEAKGVKLVYLTLHVGLGTFRPVSVDNVDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A AQ LN VK GGRIV+VGTTS+R LET + DG + SG+TNIFI P
Sbjct: 225 HSEFYNLSAEAAQTLNQVKDSGGRIVAVGTTSIRTLETIGNKFDGRLEADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY FR VD +NFHLPKSTL+MLVSAF G E T Y+HA+ YRF+S+GD +
Sbjct: 285 GYTFRIVDAFSTNFHLPKSTLVMLVSAFAGREFTLDAYKHAVEERYRFFSFGDAMFI 341
>gi|260887834|ref|ZP_05899097.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Selenomonas
sputigena ATCC 35185]
gi|330838599|ref|YP_004413179.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Selenomonas
sputigena ATCC 35185]
gi|260862440|gb|EEX76940.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Selenomonas
sputigena ATCC 35185]
gi|329746363|gb|AEB99719.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Selenomonas
sputigena ATCC 35185]
Length = 343
Score = 469 bits (1207), Expect = e-130, Method: Composition-based stats.
Identities = 152/360 (42%), Positives = 213/360 (59%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M++K+FD++LP RIA +P+ PR+++RLMV+ P I DL FL DA++
Sbjct: 1 MLLKDFDYELPEERIAQKPIEPRNASRLMVLDP---VAKTIEHRHFYDLGEFLAPGDALI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G R I L R+ +SW RP K + G ++ F +
Sbjct: 58 LNDTRVLPARLYGRR----EPTGAHIEVFLLRRLDKDSWETLVRPGKKAQVGQVIRFSDE 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A V+ + G ++ F G+ E + +G PLPPYI + D Y
Sbjct: 114 -----LCAEVMAHTDFGGRIVKFRYEGV-FEEILDRLGETPLPPYIHER----LEDKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + +GS AAPTAGLHFT L+ L + G+ + FVTLHVG GTF PV VE ++H M
Sbjct: 164 QTVYCREEGSAAAPTAGLHFTREQLAELKAQGVHIGFVTLHVGLGTFRPVNVEKIEEHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA+ + K+ GGR+++VGTTS+R LE+A G+I+ SG+T+IFI PG
Sbjct: 224 HSEYYQLPEETAELIRRTKAAGGRVIAVGTTSIRTLESAAEAQGVISAKSGWTDIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRF+ VD L++NFHLPKSTLLML+SAF G E Y+ A+ YRF+S+GD +KR
Sbjct: 284 YRFKIVDALVTNFHLPKSTLLMLISAFAGREFVLHAYEEAVREKYRFFSFGDAMF-LRKR 342
>gi|323489999|ref|ZP_08095220.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Planococcus
donghaensis MPA1U2]
gi|323396295|gb|EGA89120.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Planococcus
donghaensis MPA1U2]
Length = 359
Score = 469 bits (1207), Expect = e-130, Method: Composition-based stats.
Identities = 143/357 (40%), Positives = 201/357 (56%), Gaps = 17/357 (4%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
++DFDLP IA P+ R S+RL+V++ S D+ +L+ D +V N+T
Sbjct: 14 DYDFDLPEELIAQTPLLDRTSSRLLVMNKESGET---SHRHFRDITDYLHKGDTLVLNDT 70
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQS 124
+V+ A+L GV+ I L ++ + W +P+K +K G ++ F G+
Sbjct: 71 RVLPARLMGVK----EDTGANIELLLLKQIEDDVWETLVKPAKKVKIGTVVSF----GEG 122
Query: 125 RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTY 184
L A + G GI + +G +PLPPYI K D YQT +
Sbjct: 123 LLRAECTGILDHGGRHFKMIYDGI-FYEILDQLGEMPLPPYIREK----LEDQDRYQTVF 177
Query: 185 AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEI 244
AK +GS AAPTAGLHFT LL ++ + G+ + F+TLHVG GTF PV VE +DH MHSE
Sbjct: 178 AKERGSAAAPTAGLHFTDELLEKIRNKGVNITFITLHVGLGTFRPVSVESIEDHEMHSEF 237
Query: 245 GFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGYRF 303
I +A+ +N K GGRIVSVGTTS R LE+ + DG + SG+T+IFI PGY F
Sbjct: 238 YRITKESAELINETKKNGGRIVSVGTTSTRTLESVAQKFDGKLQEDSGWTDIFIFPGYEF 297
Query: 304 RAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
+AVD L++NFHLPKSTL+MLVSA + Y+ A+ YRF+S+GD + ++
Sbjct: 298 KAVDGLITNFHLPKSTLVMLVSALSSRDHILNAYKQAVDERYRFFSFGDAMFIEPQK 354
>gi|167750837|ref|ZP_02422964.1| hypothetical protein EUBSIR_01820 [Eubacterium siraeum DSM 15702]
gi|167656272|gb|EDS00402.1| hypothetical protein EUBSIR_01820 [Eubacterium siraeum DSM 15702]
Length = 386
Score = 469 bits (1207), Expect = e-130, Method: Composition-based stats.
Identities = 144/359 (40%), Positives = 202/359 (56%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+ +F +DLP IA P+ PRDS+RLM + I+ ++ +L D +V
Sbjct: 44 MLKSDFYYDLPQELIAQTPLEPRDSSRLMKIDRKSGK---ITHDRFYNICDYLEKGDLLV 100
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N++KV A+L GV+ + L ++S N W V +P K +K G + F
Sbjct: 101 LNDSKVFPARLYGVK----QETGAAVQFLLLHQISHNRWEVMVKPGKRLKIGTKVDF--- 153
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A ++D G+ + F+ G + + +G +PLPPYI K +D Y
Sbjct: 154 --SGILTAEIVDYAEGGDRIAEFTYDGDSIFEVLDRIGQMPLPPYITEK----LKDKDRY 207
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
T Y+ GS AAPTAGLHFT N+ ++L G+ FVTLHVG GTF PVK ++ DH M
Sbjct: 208 NTIYSHEVGSAAAPTAGLHFTENVFAKLREKGVDTAFVTLHVGLGTFRPVKEDNILDHKM 267
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT--EDGIINPWSGFTNIFIT 298
H E I TA + + + RGGR++SVGTTS R LE+A + +G I S T IFI
Sbjct: 268 HVEHYSIPQETADKIKACRERGGRVISVGTTSCRTLESAASLDPNGEIKACSHDTGIFIY 327
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY F+A+D L++NFHLP+STL+MLVSAF G E+T Y AI YRF+S+GD+ ++
Sbjct: 328 PGYEFKAIDGLITNFHLPESTLIMLVSAFLGREKTLNAYNVAIQEKYRFFSFGDSMIII 386
>gi|253751451|ref|YP_003024592.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus suis SC84]
gi|253753352|ref|YP_003026493.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus suis P1/7]
gi|253755819|ref|YP_003028959.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus suis BM407]
gi|251815740|emb|CAZ51341.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus suis SC84]
gi|251818283|emb|CAZ56092.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus suis BM407]
gi|251819598|emb|CAR45300.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus suis P1/7]
gi|319757868|gb|ADV69810.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Streptococcus suis JS14]
Length = 342
Score = 469 bits (1207), Expect = e-130, Method: Composition-based stats.
Identities = 160/357 (44%), Positives = 212/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RDS++L+++ + D + LN DA+V
Sbjct: 1 MNTADFDFDLPEELIAQVPLEKRDSSKLLILDREKRS---MVDSHFDHIIDQLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLYGYK----PETMGHVELLLLKNTQGDQWEVLAKPAKRLKVGTTVAF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL AT++++ G ++ FS GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATIVEELEHGGRIVEFSYEGIFLE-VLESLGEMPLPPYIHEK----LEDRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTQELLEKIEAKGVKLVYLTLHVGLGTFRPVSVDNVDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A AQ LN VK GGRIV+VGTTS+R LET + DG + SG+TNIFI P
Sbjct: 225 HSEFYNLSAEAAQTLNQVKDSGGRIVAVGTTSIRTLETIGNKFDGRLQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY FR VD +NFHLPKSTL+MLVSAF G E T Y+HA+ YRF+S+GD +
Sbjct: 285 GYTFRIVDAFSTNFHLPKSTLVMLVSAFAGREFTLDAYKHAVEERYRFFSFGDAMFI 341
>gi|226311457|ref|YP_002771351.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Brevibacillus brevis NBRC 100599]
gi|254764267|sp|C0ZAN8|QUEA_BREBN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|226094405|dbj|BAH42847.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Brevibacillus brevis NBRC 100599]
Length = 342
Score = 469 bits (1207), Expect = e-130, Method: Composition-based stats.
Identities = 138/358 (38%), Positives = 197/358 (55%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RL+V+ I + L L + D +V
Sbjct: 1 MDVQQFDFDLPEHLIAQHPLEDRTSSRLLVLEKQTGN---IVHQQFTHLIDHLQAGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+++V+ A+L G + +I L + + W +P K +K G + F
Sbjct: 58 MNDSRVLPARLIGEK----TDTGAKIEILLLKSLGEDRWETLVKPGKRMKPGTEVVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L D TG ++ F GI + +G++PLPPYI D Y
Sbjct: 111 -GNGLLRCVCEDVTETGGRIVRFLYEGI-FYEILDQLGSMPLPPYIH----AQLEDSERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT L ++ + G+++ +VTLHVG GTF PV + ++H+M
Sbjct: 165 QTVYAKERGSAAAPTAGLHFTKPYLEQIAAKGVQLAYVTLHVGLGTFRPVSADSVEEHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWSGFTNIFITP 299
H+E I T + +N K+ G R+++VGTTS R LET G + SG+T+IFI P
Sbjct: 225 HAEYYEIPEETVELVNQAKAEGRRVIAVGTTSCRTLETVGRANGGKLVATSGWTDIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY F +D L++NFHLPKSTL+MLVSA G E + Y+ A+ YRF+S+GD L+
Sbjct: 285 GYTFSILDGLLTNFHLPKSTLVMLVSALAGKENVMRAYKRAVEEEYRFFSFGDAMLIL 342
>gi|225181933|ref|ZP_03735367.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Dethiobacter alkaliphilus AHT 1]
gi|225167373|gb|EEG76190.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Dethiobacter alkaliphilus AHT 1]
Length = 342
Score = 469 bits (1207), Expect = e-130, Method: Composition-based stats.
Identities = 150/357 (42%), Positives = 206/357 (57%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EFD++LP IA P+ R+++RL+++H + SD+ + L + D +V
Sbjct: 1 MHLSEFDYELPEELIAQVPLTDREASRLLILHRKSGA---VEHGNFSDILSHLQAGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G + L R W +P + ++ G + F
Sbjct: 58 LNDTKVLPARLTGRKKGGGAMA----EVLLLTRKDKACWEALVKPGRRLRPGAEVEF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L A + ++ G L+ F GI E + +G +PLPPYI K D Y
Sbjct: 111 -GNGELTAVIKEELADGTRLVEFRYDGI-FEEVLDRLGEMPLPPYITEKLA----DRQRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL+ GI V ++TLHVG GTF PVK ED +H M
Sbjct: 165 QTVYAKNEGSAAAPTAGLHFTPRLLAEAQDRGINVVYLTLHVGLGTFRPVKTEDIREHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I +AQ LNS + GGRIV+VGTTS R+LET +DG IN SG+T+IFI PG
Sbjct: 225 HSEYYNISPESAQILNSCRRAGGRIVAVGTTSCRVLETVAQDDGTINAGSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YRF+ V+ L++NFHLPKSTL+M++SAF G + Y+ A+ YRF+S+GD L+
Sbjct: 285 YRFKTVNALLTNFHLPKSTLIMMISAFAGRDNVLNAYREAVQERYRFFSFGDAMLII 341
>gi|157693175|ref|YP_001487637.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
pumilus SAFR-032]
gi|167016403|sp|A8FFR0|QUEA_BACP2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|157681933|gb|ABV63077.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
pumilus SAFR-032]
Length = 342
Score = 469 bits (1207), Expect = e-130, Method: Composition-based stats.
Identities = 145/357 (40%), Positives = 208/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++ FDFDLP IA P+ RD++RLMV++ ++ S + + + D +V
Sbjct: 1 MKLELFDFDLPERLIAQVPLEKRDASRLMVLNKQTG---EVTHDTFSQITDYFQTGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ ++ L + + W +P+K +KKG ++ F
Sbjct: 58 LNNTRVLPARLFGMK----EDTGAKVELLLLKQEEGDKWETLVKPAKRVKKGTVITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A ++ G + F +GI + +G +PLPPYI + D Y
Sbjct: 111 -GDGRLQAVCTEELEHGGRKVEFQYTGI-FYEVLESLGEMPLPPYIKEQLD----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT+ LL L G+ + F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYSKEVGSAAAPTAGLHFTNELLDALKEKGVHIAFITLHVGLGTFRPVSADRIEEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E ++ TA LN V+ GGRI+SVGTTS R LET A+ DG SG+T+IFI P
Sbjct: 225 HAEFYEMNEETAAELNRVRKEGGRIISVGTTSTRTLETIASAHDGEFKASSGWTSIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D +++NFHLPKS+L+MLVSA G E K Y A+ YRF+S+GD L+
Sbjct: 285 GYTFKAIDGMITNFHLPKSSLIMLVSALAGREHVLKAYNEAVKEEYRFFSFGDAMLI 341
>gi|16079825|ref|NP_390650.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
subtilis subsp. subtilis str. 168]
gi|221310710|ref|ZP_03592557.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
subtilis subsp. subtilis str. 168]
gi|221315034|ref|ZP_03596839.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
subtilis subsp. subtilis str. NCIB 3610]
gi|221319955|ref|ZP_03601249.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
subtilis subsp. subtilis str. JH642]
gi|221324236|ref|ZP_03605530.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
subtilis subsp. subtilis str. SMY]
gi|321312300|ref|YP_004204587.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
subtilis BSn5]
gi|3914532|sp|O32054|QUEA_BACSU RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|2635237|emb|CAB14732.1| S-adenosylmethionine tRNA ribosyltransferase-isomerase [Bacillus
subtilis subsp. subtilis str. 168]
gi|6977807|emb|CAB75332.1| QueA protein [Bacillus subtilis subsp. subtilis str. 168]
gi|291485182|dbj|BAI86257.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
subtilis subsp. natto BEST195]
gi|320018574|gb|ADV93560.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
subtilis BSn5]
Length = 342
Score = 469 bits (1207), Expect = e-130, Method: Composition-based stats.
Identities = 148/358 (41%), Positives = 210/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP IA P+ RD++RLMV+ + ++D + +F N D +V
Sbjct: 1 MKVDLFDFELPERLIAQVPLEQRDASRLMVLDKHTG---ELTDSSFKHIISFFNEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + ++ L + + + W A+P+K +KKG ++ F
Sbjct: 58 LNNTRVLPARLFGTK----EDTGAKVELLLLKQETGDKWETLAKPAKRVKKGTVVTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A ++ G + F GI + +G +PLPPYI + D Y
Sbjct: 111 -GDGRLKAICTEELEHGGRKMEFQYDGI-FYEVLESLGEMPLPPYIKEQLD----DKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT +L +L G+++ F+TLHVG GTF PV ++ ++H M
Sbjct: 165 QTVYSKEIGSAAAPTAGLHFTEEILQQLKDKGVQIEFITLHVGLGTFRPVSADEVEEHNM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
H+E + TA ALN V+ GGRI+SVGTTS R LET E DG SG+T+IFI P
Sbjct: 225 HAEFYQMSEETAAALNKVRENGGRIISVGTTSTRTLETIAGEHDGQFKASSGWTSIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY F+A+D +++NFHLPKS+L+MLVSA G E + Y HA+ YRF+S+GD L+
Sbjct: 285 GYEFKAIDGMITNFHLPKSSLIMLVSALAGRENILRAYNHAVEEEYRFFSFGDAMLII 342
>gi|315613447|ref|ZP_07888355.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis ATCC 49296]
gi|315314443|gb|EFU62487.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sanguinis ATCC 49296]
Length = 342
Score = 468 bits (1206), Expect = e-130, Method: Composition-based stats.
Identities = 149/358 (41%), Positives = 206/358 (57%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETG---EMQDKHFHSIIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L + + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQK----EETGGHVELLLLKNTAGDEWEVLAKPAKRLKVGTRVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLE-VLESLGEMPLPPYIHEKLD----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + S G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQSKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ +G I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFNGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G + Y HAI YRF+S+GD ++
Sbjct: 285 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRDLVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|116493018|ref|YP_804753.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Pediococcus pentosaceus ATCC 25745]
gi|122265518|sp|Q03ER1|QUEA_PEDPA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|116103168|gb|ABJ68311.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Pediococcus pentosaceus ATCC 25745]
Length = 344
Score = 468 bits (1206), Expect = e-130, Method: Composition-based stats.
Identities = 146/357 (40%), Positives = 206/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++F++DLP IA P+ RD +RL+V+ + D D+ LN DA+V
Sbjct: 3 LTTEDFNYDLPHELIAQTPIKERDESRLLVLDHETGA---MEDKHFYDIIDQLNPGDAVV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN++V+ A++ G++ ++ L + + W +P+K K G + F
Sbjct: 60 MNNSRVMPARIYGIK----DKTGGHFEVLLLHNIEGDRWETLVKPAKRAKTGTKIIF--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L ATV + G +VF GI + +G +PLPPYI K D Y
Sbjct: 113 -GDGALTATVTKELEHGGREIVFDYDGI-FMEVLEKLGEMPLPPYIKEKLD----DPERY 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLH+T LL ++ GIK+ ++TLHVG GTF PV ++ +DH M
Sbjct: 167 QTVYSKEPGSAAAPTAGLHWTKELLEKVEQKGIKLVYLTLHVGLGTFRPVDEDNIEDHKM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + +A ALN VK +GGRIV+ GTTS+R LET ++ +G I SG+T+IFI P
Sbjct: 227 HSEFYQLSEESAAALNEVKKQGGRIVATGTTSIRTLETIGSKFNGEIKADSGWTDIFIKP 286
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY ++ VD ++NFHLPKSTL+MLV+AF G E YQHAI YRF+S+GD +
Sbjct: 287 GYEWKVVDAFITNFHLPKSTLVMLVAAFTGRENILNAYQHAIEEKYRFFSFGDAMFI 343
>gi|15901270|ref|NP_345874.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae TIGR4]
gi|111658609|ref|ZP_01409266.1| hypothetical protein SpneT_02000284 [Streptococcus pneumoniae
TIGR4]
gi|225860804|ref|YP_002742313.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae Taiwan19F-14]
gi|298229585|ref|ZP_06963266.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae str. Canada MDR_19F]
gi|298255442|ref|ZP_06979028.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae str. Canada MDR_19A]
gi|298502633|ref|YP_003724573.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae TCH8431/19A]
gi|21263901|sp|Q97Q15|QUEA_STRPN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|14972905|gb|AAK75514.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae TIGR4]
gi|225726590|gb|ACO22441.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae Taiwan19F-14]
gi|298238228|gb|ADI69359.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae TCH8431/19A]
Length = 342
Score = 468 bits (1206), Expect = e-130, Method: Composition-based stats.
Identities = 150/358 (41%), Positives = 206/358 (57%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETG---EMQDKHFHSIIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLE-VLESLGEMPLPPYIHEKLD----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKKNGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y H+I YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHSIQEHYRFFSFGDAMFIY 342
>gi|229135242|ref|ZP_04264040.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus BDRD-ST196]
gi|228648220|gb|EEL04257.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus BDRD-ST196]
Length = 354
Score = 468 bits (1205), Expect = e-130, Method: Composition-based stats.
Identities = 148/357 (41%), Positives = 204/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 5 MDINLFDFHLPEELIAQIPLEDRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 62 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLIKPAKRVKEGTVISF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT I + G L FS GI + +G +PLPPYI D Y
Sbjct: 115 -GEGKLKATCIGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKE----TLEDRDRY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+ + F+TLHVG GTF PV + ++H M
Sbjct: 169 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVGLAFITLHVGLGTFRPVSADTIEEHHM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT G + SG+T+IF+ P
Sbjct: 229 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHSGKLCAASGWTDIFMYP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 289 GYEFKAIDGLITNFHLPKSTLIMLVSAFSNRDNVLHAYNEAVKEKYRFFSFGDAMFV 345
>gi|116872960|ref|YP_849741.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase [Listeria
welshimeri serovar 6b str. SLCC5334]
gi|123461090|sp|A0AIY0|QUEA_LISW6 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|116741838|emb|CAK20962.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
welshimeri serovar 6b str. SLCC5334]
Length = 342
Score = 468 bits (1205), Expect = e-130, Method: Composition-based stats.
Identities = 153/357 (42%), Positives = 216/357 (60%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++LN DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKKSG---EIKDQHFTDILSYLNEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G + + I L + N+W +P+K I+KG + F
Sbjct: 58 LNDTRVLPARLHGTK----DETGAHIEVLLLKQKEGNAWETLVKPAKRIRKGGTITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+AT +++ G +L FS GI + +G +PLPPYI + D Y
Sbjct: 111 -GNGALKATCLEELEHGGRILEFSYEGI-FYEVLEQLGEMPLPPYIKEQLA----DQDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEDLLAQISAKGVEIIFVTLHVGLGTFRPVDVEDTANHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFITP 299
HSE + A +N +K+ GG++V+VGTTS+R LET + + G + SG+T+IFI+P
Sbjct: 225 HSEFYRLTEDAANRINKIKATGGKVVAVGTTSIRTLETIASHNEGKLVAESGWTDIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+AVD L++N HLPKSTL+MLVSA Y HA+ YRF+S+GD +
Sbjct: 285 GYTFQAVDALITNLHLPKSTLIMLVSALSNRTNILAAYNHAVEQQYRFFSFGDAMFI 341
>gi|134299522|ref|YP_001113018.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Desulfotomaculum reducens MI-1]
gi|172044286|sp|A4J540|QUEA_DESRM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|134052222|gb|ABO50193.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Desulfotomaculum reducens MI-1]
Length = 341
Score = 468 bits (1205), Expect = e-130, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 212/357 (59%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF+LP IA P+ RD +RLM+VH + DL +L D +V
Sbjct: 1 MQLSDFDFELPEELIAQEPIKQRDQSRLMIVHRD---IDRTEHKTFKDLLQYLQPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N++KV+ A++ G + +I L ++S N W +P K K G+IL F
Sbjct: 58 MNDSKVLPARIYGEKVS----TGAKIEVLLLRQISANQWETLVKPGKRAKIGEILDF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +++ ++D + G ++ FS L + + +G++PLPPYI + D Y
Sbjct: 111 -GSGKMKGKIVDHTDVGGRVIEFSCQEPFL-QVLEQIGSMPLPPYIKKPLT----DKQRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +GS AAPTAGLHFT LL + + G+ + V LHVG GTF PV+VED H M
Sbjct: 165 QTVYARQEGSAAAPTAGLHFTRELLEEIRNRGVSIVTVLLHVGLGTFRPVQVEDVTSHRM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I A+ +N K RGGR+++VGTTS+R LET++ E G + P SGFT+IFI PG
Sbjct: 225 HEEYYEITPQAAEEINQAKLRGGRVIAVGTTSVRCLETSSNEAGQVLPGSGFTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ ++ L++NFHLPKS+LLML+SA G E+ K YQ A++ YRF+S+GD L+
Sbjct: 285 YQFKVIEGLVTNFHLPKSSLLMLISALAGREKILKAYQQAVTEQYRFFSFGDAMLII 341
>gi|322388742|ref|ZP_08062339.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus infantis ATCC 700779]
gi|321140361|gb|EFX35869.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus infantis ATCC 700779]
Length = 345
Score = 468 bits (1205), Expect = e-130, Method: Composition-based stats.
Identities = 150/358 (41%), Positives = 205/358 (57%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +FDF LP IA P+ RD+++L++V+ D + L DA+V
Sbjct: 4 LNTNDFDFHLPEELIAQTPLEKRDASKLLMVNRKTG---EFQDRHFHSIIEMLEPGDALV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G + + L + + W V A+P+K +K G + F
Sbjct: 61 MNDTRVLPARLHGQK----EETGGHVELLLLKNTAGDEWEVLAKPAKRLKVGTRVIF--- 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE + +G +PLPPYI K D Y
Sbjct: 114 -GDGRLSAVVTEELTHGGRIVRFEYEGIFLE-VLESLGEMPLPPYIHEKLD----DRERY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 168 QTVYAKESGSAAAPTAGLHFTKELLEEIQQKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L VK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 228 HSEFYQLSEEAAATLRQVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 287
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E K YQHAI YRF+S+GD ++
Sbjct: 288 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLKAYQHAIDEKYRFFSFGDAMFIY 345
>gi|319939489|ref|ZP_08013849.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus anginosus 1_2_62CV]
gi|319811475|gb|EFW07770.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus anginosus 1_2_62CV]
Length = 342
Score = 468 bits (1205), Expect = e-130, Method: Composition-based stats.
Identities = 152/357 (42%), Positives = 212/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD++RL+VV+ + D + L+ DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASRLLVVNHETG---QMEDTHFDAIIDQLHPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G + + L ++ + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLHGEK----PETGGHVELLLLKNIAGDDWEVLAKPAKRLKVGAAISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+++ G ++ F GI LE + +G +PLPPYI K +D Y
Sbjct: 111 -GDGRLTATVLEELEHGGRIVRFHYQGIFLE-VLESLGEMPLPPYIHEK----LKDRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+++ + G+K+ ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTKELLAQIEAKGVKLVYLTLHVGLGTFRPVSVDNVDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L VK+ G +V+VGTTS+R LET ++ +G I SG+TNIFI P
Sbjct: 225 HSEFYTLSEEAANTLRQVKASGHHVVAVGTTSIRTLETIGSKFNGEIKADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY ++ VD +NFHLPKSTL+MLVSAF G E YQHAI YRF+S+GD +
Sbjct: 285 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLSAYQHAIDEKYRFFSFGDAMFI 341
>gi|299144018|ref|ZP_07037098.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Peptoniphilus sp. oral taxon 386 str. F0131]
gi|298518503|gb|EFI42242.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Peptoniphilus sp. oral taxon 386 str. F0131]
Length = 340
Score = 468 bits (1205), Expect = e-130, Method: Composition-based stats.
Identities = 142/357 (39%), Positives = 204/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F+++LP IA P+ RD +RL+V++ I D+ +L + D +V
Sbjct: 1 MKTRDFNYELPKELIAQHPLENRDYSRLLVLNRLTGD---IVHKHFYDIYDYLKTGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A++ G R R++ I L ++ ++W +P K K G + F
Sbjct: 58 LNNTRVMPARIFGSRI----DRQEHIEFLLLKKIEKDTWECLCKPGKKAKVGTKIFF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
RL ++D G ++ F GI E + +G +PLPPYI K D Y
Sbjct: 111 --SERLNGEIVDVLEDGNRIIKFIYEGI-FEEILDELGEMPLPPYITEK----LEDRERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+KI GS AAPTAGLHFT LL +L G+K+ +VTLHVG GTF PVK +D +H M
Sbjct: 164 QTVYSKIDGSAAAPTAGLHFTKELLEKLEDKGVKIVYVTLHVGLGTFRPVKSDDIFNHHM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I TA +N K RIV+VGTTS+R LE+ + G++ +G+T+IFI PG
Sbjct: 224 HSEYYEICKDTADEINKAKIENRRIVAVGTTSIRTLESCADDKGMVKESNGWTDIFIHPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ VD L++NFHLP+STL+MLVSAF Y+ A+ YRF+S+GD ++
Sbjct: 284 YKFKCVDALITNFHLPESTLVMLVSAFATRSMILNTYEIAVKEKYRFFSFGDAMFIY 340
>gi|322375519|ref|ZP_08050032.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sp. C300]
gi|321279782|gb|EFX56822.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sp. C300]
Length = 342
Score = 468 bits (1205), Expect = e-130, Method: Composition-based stats.
Identities = 149/358 (41%), Positives = 207/358 (57%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RDS++L++V+ + D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDSSKLLIVNRETG---EMQDKHFHSIIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L + + W V A+P+K +K G ++F
Sbjct: 58 MNDTRVLPARLYGQK----EETGGHVELLLLKNTAGDEWEVLAKPAKRLKVGTRVNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLE-VLESLGEMPLPPYIHEKLD----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ +G I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFNGQIQSDSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G + Y HAI YRF+S+GD ++
Sbjct: 285 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRDLVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|148985629|ref|ZP_01818783.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP3-BS71]
gi|148993024|ref|ZP_01822618.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP9-BS68]
gi|168489581|ref|ZP_02713780.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP195]
gi|147922110|gb|EDK73232.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP3-BS71]
gi|147928225|gb|EDK79242.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP9-BS68]
gi|183571952|gb|EDT92480.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP195]
gi|301800281|emb|CBW32901.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae OXC141]
gi|332073723|gb|EGI84202.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae GA17570]
Length = 342
Score = 468 bits (1205), Expect = e-130, Method: Composition-based stats.
Identities = 150/358 (41%), Positives = 206/358 (57%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETG---EMQDKHFHSIINMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLE-VLESLGEMPLPPYIHEKLD----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKKNGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y H+I YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHSIQEHYRFFSFGDAMFIY 342
>gi|259046888|ref|ZP_05737289.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Granulicatella adiacens ATCC 49175]
gi|259036511|gb|EEW37766.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Granulicatella adiacens ATCC 49175]
Length = 345
Score = 468 bits (1204), Expect = e-130, Method: Composition-based stats.
Identities = 155/358 (43%), Positives = 209/358 (58%), Gaps = 17/358 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
K+FDFDLP IA P+ R S+RL++V I D SDL L + D +V
Sbjct: 4 TTKDFDFDLPEELIAQTPLKDRTSSRLLMVDK---TKHTIEDRHFSDLLEELEAGDTLVV 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNT+V+ A+L G + I L + W +P+K +K G ++ F
Sbjct: 61 NNTRVLPARLYGTK----EETGAHIEVLLLTNTEGDKWETLVKPAKRMKVGSVVSF---- 112
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G RL+ATVI++ G ++ FS G+ LE + +G +PLPPYI + D YQ
Sbjct: 113 GDGRLKATVIEELEQGGRIIEFSYEGVFLE-VLESLGEMPLPPYIKER----LEDKERYQ 167
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YAK GS AAPTAGLHFT L+ ++ G+ + VTLHVG GTF PV V+ +DH MH
Sbjct: 168 TVYAKENGSAAAPTAGLHFTEELMQQIRDKGVNIVPVTLHVGLGTFRPVSVDSLEDHKMH 227
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITPG 300
SE + TA + + K G R+++VGTTS+R LET A DG + P SG+T+IFI+PG
Sbjct: 228 SEYYNVSKETADMIEATKKAGKRVIAVGTTSIRTLETVARDNDGHVVPASGWTDIFISPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y F VD ++NFHLPKSTL+MLVSA+ G E T + YQHAI YRF+S+GD + +
Sbjct: 288 YEFGVVDAFVTNFHLPKSTLVMLVSAYLGREFTLEAYQHAIEERYRFFSFGDAMFVHK 345
>gi|304436494|ref|ZP_07396468.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Selenomonas
sp. oral taxon 149 str. 67H29BP]
gi|304370540|gb|EFM24191.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Selenomonas
sp. oral taxon 149 str. 67H29BP]
Length = 343
Score = 468 bits (1204), Expect = e-130, Method: Composition-based stats.
Identities = 150/356 (42%), Positives = 213/356 (59%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+ LP +IA P PRDS+R+MV+ P I L +L D ++
Sbjct: 1 MNISDFDYFLPEEQIAQVPADPRDSSRMMVLSPKTQS---IEHRHFYQLDEYLTDGDVLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L GVR + L ++ + W V +P K ++ G ++ F +
Sbjct: 58 FNDTRVIPARLIGVR----QPTGGKAEVFLLRQLERDRWEVLVKPGKKMRVGSVITFGHE 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L V+ + G ++ FS GI E + +GT+PLPPYI +D Y
Sbjct: 114 -----LSCEVLAYTDFGGRIVKFSYEGI-FEEILERLGTMPLPPYIHE----TLQDPERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ +GS AAPTAGLHFT L+ RL G+++ FVTLHVG GTF PV+V++ +DH+M
Sbjct: 164 QTIYSREKGSAAAPTAGLHFTEALMDRLRKKGVRLGFVTLHVGLGTFRPVQVDEIEDHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I TA + K G R+++VGTTS+R LE+A + G+I G+TNIFI PG
Sbjct: 224 HSEFYSIPTETADLIRMAKQEGRRVIAVGTTSIRTLESAAVDHGMIEAKQGWTNIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD +++NFHLPKSTL+MLVSAF G E T K Y+ A+ YRF+S+GD L+
Sbjct: 284 YQFKIVDAVITNFHLPKSTLIMLVSAFAGREFTLKAYRTAVEENYRFFSFGDAMLI 339
>gi|163942168|ref|YP_001647052.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
weihenstephanensis KBAB4]
gi|226713834|sp|A9VIP4|QUEA_BACWK RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|163864365|gb|ABY45424.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Bacillus
weihenstephanensis KBAB4]
Length = 350
Score = 468 bits (1204), Expect = e-130, Method: Composition-based stats.
Identities = 148/357 (41%), Positives = 203/357 (56%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L D +V
Sbjct: 1 MDINLFDFHLPEELIAQIPLEERETSRLMVLDRETGD---IEHKHFADILSYLQEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLIKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT I + G L FS GI + +G +PLPPYI D Y
Sbjct: 111 -GEGKLKATCIGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKE----TLEDRDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+ + F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKQKGVGLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT G + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKEDGGRIITVGTTSTRTLETIATDHSGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFSNRDNVLHAYNEAVKEKYRFFSFGDAMFV 341
>gi|323702061|ref|ZP_08113729.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfotomaculum nigrificans DSM 574]
gi|323532943|gb|EGB22814.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfotomaculum nigrificans DSM 574]
Length = 341
Score = 468 bits (1204), Expect = e-130, Method: Composition-based stats.
Identities = 148/357 (41%), Positives = 207/357 (57%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + ++D+ LP IA P+ RD +RLMVVH + D+ +L D +V
Sbjct: 1 MRLSDYDYQLPEELIAQEPLVNRDQSRLMVVHKDNQN---FEHKHFKDIINYLQPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A++ G R +I L +++ N W +P K + GDIL F
Sbjct: 58 LNDTKVIPARIFGTRIA----TGAKIEVLLLRQLTANRWETLVKPGKKARVGDILDF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
GQ +++ ++D + G ++ FS + + +GT+PLPPYI + D Y
Sbjct: 111 -GQGQMQGKILDHTDVGGRIIEFSFR-EPFVQVLERIGTMPLPPYIKKPLA----DQQRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +GS AAPTAGLHFT LL+ + S G+ V LHVG GTF PV+VED H M
Sbjct: 165 QTVYARQEGSAAAPTAGLHFTPELLAEIRSRGVITVNVLLHVGLGTFRPVQVEDITQHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A+ +N+ + RGGRI++VGTTS+R LET+ + G + SG T+IFI PG
Sbjct: 225 HEEYYEVTPEAAEKINTARERGGRIIAVGTTSVRCLETSANQAGQVLAGSGLTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YRF+ V+ L++NFHLPKSTLLMLVSA G E+ YQ A+ YRF+S+GD L+
Sbjct: 285 YRFKVVEGLITNFHLPKSTLLMLVSALAGREKILAAYQEAVRQRYRFFSFGDAMLII 341
>gi|323491585|ref|ZP_08096764.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
brasiliensis LMG 20546]
gi|323314161|gb|EGA67246.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
brasiliensis LMG 20546]
Length = 353
Score = 468 bits (1204), Expect = e-130, Method: Composition-based stats.
Identities = 142/363 (39%), Positives = 205/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N + D +D+ + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQPERTASRLLQMDGNTG---ELVDGTFTDVLEQVQPGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + V S + R SK K G +
Sbjct: 58 FNNTRVIPARMFGRKES-----GGKLEVLVERVVDEKSILAHVRCSKSPKPGSTIFVGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D A ++ + + + + S + + +G +PLPPYI RP + D Y
Sbjct: 113 D---EFSAEMVARHDA--LFELKFNSEQNVLAVLEEIGHMPLPPYI--DRPDEDSDKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G + +VTLHVGAGTF PVKV+D DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDEPLLEKIKAKGAEFAYVTLHVGAGTFQPVKVDDIHDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + A+N+ K+RGGRIV+VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAINAAKARGGRIVAVGTTSVRSLESAAQDALKKGTELVPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ + YRF+SYGD+ +
Sbjct: 286 IYPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYENTMNAYKHAVENKYRFFSYGDSMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 KKK 348
>gi|168491320|ref|ZP_02715463.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae CDC0288-04]
gi|183574488|gb|EDT95016.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae CDC0288-04]
Length = 342
Score = 468 bits (1204), Expect = e-130, Method: Composition-based stats.
Identities = 150/358 (41%), Positives = 206/358 (57%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETG---EMQDKHFHSIIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLE-VLESLGEMPLPPYIHEKLD----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y H+I YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHSIQEHYRFFSFGDAMFIY 342
>gi|293365730|ref|ZP_06612439.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus oralis ATCC 35037]
gi|307703671|ref|ZP_07640613.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus oralis ATCC 35037]
gi|291316098|gb|EFE56542.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus oralis ATCC 35037]
gi|307623078|gb|EFO02073.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus oralis ATCC 35037]
Length = 342
Score = 468 bits (1204), Expect = e-130, Method: Composition-based stats.
Identities = 148/358 (41%), Positives = 205/358 (57%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RDS++L++V+ D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDSSKLLIVNRETG---EFQDKHFHSIIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L + + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQK----EETGGHVELLLLKNTAGDEWEVLAKPAKRLKVGTRVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLE-VLESLGEMPLPPYIHEKLD----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L +VK GGR+++VGTTS+R LET ++ +G I SG+TNIFI P
Sbjct: 225 HSEFYQLSDEAAATLRTVKENGGRVIAVGTTSIRTLETIGSKFNGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G + Y HAI YRF+S+GD ++
Sbjct: 285 GYDWKVVDAFSTNFHLPKSTLVMLVSAFAGRDLVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|270292452|ref|ZP_06198663.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sp. M143]
gi|270278431|gb|EFA24277.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sp. M143]
Length = 342
Score = 468 bits (1204), Expect = e-130, Method: Composition-based stats.
Identities = 149/358 (41%), Positives = 205/358 (57%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETG---EFQDKHFHSIIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L + + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQK----EETGGHVELLLLKNTAGDEWEVLAKPAKRLKVGTRVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLE-VLESLGEMPLPPYIHEKLD----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSDEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G + Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRDLVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|289434811|ref|YP_003464683.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
seeligeri serovar 1/2b str. SLCC3954]
gi|289171055|emb|CBH27597.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
seeligeri serovar 1/2b str. SLCC3954]
Length = 342
Score = 467 bits (1203), Expect = e-130, Method: Composition-based stats.
Identities = 154/357 (43%), Positives = 219/357 (61%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++L+ DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKATG---EIKDQHFTDILSYLHEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G++ + I L + N+W +P+K I++G + F
Sbjct: 58 LNDTRVLPARLHGIK----DETGAHIEVLLLKQKEGNAWETLVKPAKRIRQGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+AT +++ G +L FS GI + +G +PLPPYI + D Y
Sbjct: 111 -GDGALKATCLEELEHGGRILEFSYEGI-FYEVLEQLGEMPLPPYIKEQLA----DQDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEDLLAKIKAKGVEIIFVTLHVGLGTFRPVDVEDTANHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + A+ +N VK GG++V+VGTTS+R LET A+ +G + SG+T IFI+P
Sbjct: 225 HSEFYRLTEEAAERINKVKETGGKVVAVGTTSIRTLETIASRHEGKLVAESGWTEIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+AVD L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD +
Sbjct: 285 GYTFQAVDALITNFHLPKSTLIMLVSALSDRNKILTAYNHAVEQQYRFFSFGDAMFI 341
>gi|261366941|ref|ZP_05979824.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Subdoligranulum variabile DSM 15176]
gi|282571058|gb|EFB76593.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Subdoligranulum variabile DSM 15176]
Length = 342
Score = 467 bits (1203), Expect = e-130, Method: Composition-based stats.
Identities = 146/357 (40%), Positives = 202/357 (56%), Gaps = 15/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+ K+F +DLP IA P PRD+ARLMV++ I + DLP +L D +V
Sbjct: 1 MLKKDFWYDLPKELIAQEPAEPRDAARLMVLNRKNDT---IEHAIFHDLPKYLEKGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN+KV+ A+L G + L +V ++W ARP K ++ G + F
Sbjct: 58 VNNSKVLPARLLGTKV----PTGAVCELLLLRQVKGDTWECLARPGKRMQPGTKVTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L A V + G + F+ L ++ G +PLPPYI ++ D Y
Sbjct: 111 -GDGTLTAVVDETMPDGNKFVTFTYDTETLYEKLDEFGKMPLPPYITKQ----LEDQSQY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + + G+ + VTLHVG GTF PV E+ +DH M
Sbjct: 166 QTVYAKELGSAAAPTAGLHFTPELLDTIRANGVNIAEVTLHVGLGTFRPVNEEEIEDHQM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA A+N+ ++ G R+++VGTTS R LE + G I P SG T+IFI PG
Sbjct: 226 HSEWYSVSEDTANAINATRASGHRVIAVGTTSCRTLEAVWAKYGKIVPCSGNTDIFIYPG 285
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
A+D +++NFHLP+STL+ML+SAF G E+T Y+ A+ YRF+S+GD L+
Sbjct: 286 IDLHAIDGMITNFHLPESTLIMLISAFYGYEKTMAAYKVAVEEKYRFFSFGDAMLIL 342
>gi|307705266|ref|ZP_07642132.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus mitis SK597]
gi|307621179|gb|EFO00250.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus mitis SK597]
Length = 342
Score = 467 bits (1203), Expect = e-129, Method: Composition-based stats.
Identities = 150/358 (41%), Positives = 206/358 (57%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETG---EMQDKHFHSIIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L + + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQK----EETGGHVELLLLKNTAGDEWEVLAKPAKRLKVGTRVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLE-VLESLGEMPLPPYIHEKLD----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAVTLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|190891762|ref|YP_001978304.1| S-adenosylmethionine: tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis) protein [Rhizobium etli CIAT 652]
gi|238692548|sp|B3PZR1|QUEA_RHIE6 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|190697041|gb|ACE91126.1| S-adenosylmethionine: tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis) protein [Rhizobium etli CIAT 652]
Length = 373
Score = 467 bits (1203), Expect = e-129, Method: Composition-based stats.
Identities = 214/372 (57%), Positives = 262/372 (70%), Gaps = 14/372 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLV----------ISDHLVSDLP 50
M V FDFDLP RIALRP PRDSARL+VV+P+ +SDH V DLP
Sbjct: 1 MRVDLFDFDLPDERIALRPAEPRDSARLLVVNPHAESGPHAESVPHAESALSDHHVYDLP 60
Query: 51 AFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIK 110
+FL + DA+VFN+TKVI AQL G+R +++S TLHMR+ P+ W +A+P K IK
Sbjct: 61 SFLRAGDALVFNDTKVIPAQLEGIRHR-DGAGGQQVSATLHMRIGPSRWKAFAKPGKRIK 119
Query: 111 KGDILHFFSQDGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIA 167
+GD + F L+ATV +K GE+ L F ++G L+ I+ VG IPLPPYIA
Sbjct: 120 EGDRIAFGHSGESCFLGALDATVEEKGEAGEVTLAFDLTGPALDEAIAAVGHIPLPPYIA 179
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
KRP D RD DYQT YA+ +G+VAAPTAGLHFT +L + L GI+ +FVTLHVGAGTF
Sbjct: 180 AKRPEDERDRADYQTIYAREEGAVAAPTAGLHFTPDLFAALDKAGIERHFVTLHVGAGTF 239
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN 287
+PVK +DTDDH MH E G++ A A LN+VK+RGGRIV VGTTSLRL+E+A EDG I
Sbjct: 240 LPVKADDTDDHKMHLESGYVSAEIAARLNAVKARGGRIVCVGTTSLRLIESAAGEDGKIK 299
Query: 288 PWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
PW+G T IFITPGYRF+AVD+LM+NFHLP+STL MLVSAF G E + Y+HAIS YRF
Sbjct: 300 PWAGATGIFITPGYRFKAVDMLMTNFHLPRSTLFMLVSAFSGFETMRAAYEHAISTGYRF 359
Query: 348 YSYGDTSLLFQK 359
YSYGD SLLF+K
Sbjct: 360 YSYGDASLLFRK 371
>gi|325846681|ref|ZP_08169596.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|325481439|gb|EGC84480.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 340
Score = 467 bits (1202), Expect = e-129, Method: Composition-based stats.
Identities = 147/356 (41%), Positives = 200/356 (56%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++FD++LP IA P RD +RLMVV D D+ +LN D +V
Sbjct: 1 MRTEDFDYNLPEELIAQHPADKRDFSRLMVVDRKTGQR---EDKHFYDIIDYLNEGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G R +E++I L + + W V +P K +K G F +
Sbjct: 58 MNDTRVIPARLFGHR----PDKEEKIEVFLLENIEKDKWEVLVKPGKKMKIGTKCIFSDE 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L VID G ++ FS GI + + +G +PLPPYI K +D Y
Sbjct: 114 -----LSLEVIDIKEDGNRVVEFSYEGI-FQEILDRLGNMPLPPYIKEK----LKDKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GSVAAPTAGLHFT LL ++ G+K+ F+TL+VG GTF PVKV+D +H M
Sbjct: 164 QTVYSKNPGSVAAPTAGLHFTKELLKKIEDKGVKLAFITLNVGLGTFRPVKVDDVKNHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I TA +N K RI+S GTT+ R LE+ ++G I SG+T+IFI PG
Sbjct: 224 HSEYYQISKETADLINETKKNNKRIISTGTTTTRTLESVFKKNGQIKEDSGWTDIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
++F +D ++NFHLPKSTL+MLVSA E Y+ A+ YRF+S+GD L
Sbjct: 284 FKFNVIDCQITNFHLPKSTLIMLVSALANKEIILDAYKDAVEKKYRFFSFGDAMFL 339
>gi|227499579|ref|ZP_03929686.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Anaerococcus tetradius ATCC 35098]
gi|227218338|gb|EEI83592.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Anaerococcus tetradius ATCC 35098]
Length = 340
Score = 467 bits (1202), Expect = e-129, Method: Composition-based stats.
Identities = 146/356 (41%), Positives = 201/356 (56%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++FD+ LP IA P RD AR+MV+ I D D+ +LN D +V
Sbjct: 1 MKTEDFDYYLPEKLIAQHPSDKRDGARMMVLDKKNGA---IEDKYFYDIIDYLNPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G R +E+ I L + W V RP K +K G + F +
Sbjct: 58 MNDTRVIPARLFGHR----KDKEESIEVFLLHNIEGKVWEVLVRPGKKMKIGAEVIFSEE 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L VID G ++ F+ GI + +G +PLPPYI K +D +Y
Sbjct: 114 -----LSCKVIDIKEDGNRIVEFTYDGI-FNEILDKLGNVPLPPYIKEK----LKDPEEY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GSVAAPTAGLHFT LL R+ G+K+ F+TL+VG GTF PV ED DH M
Sbjct: 164 QTVYSKNPGSVAAPTAGLHFTKELLKRIEDKGVKLAFLTLNVGLGTFRPVNEEDITDHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA +N + G +I++VGTTS+R LE+ + G I SG+T+IFI PG
Sbjct: 224 HSEFYTLSKETASIINEGRKNGNKIIAVGTTSIRTLESVFKKCGEIREDSGWTDIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ ++ VD +++NFHLPKSTL+MLV+AF E Y +A+ YRF+S+GD +
Sbjct: 284 FEYKVVDSVITNFHLPKSTLIMLVAAFTSREIILNAYNYAVKEEYRFFSFGDCMFI 339
>gi|332074997|gb|EGI85469.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae GA41301]
Length = 342
Score = 467 bits (1202), Expect = e-129, Method: Composition-based stats.
Identities = 149/358 (41%), Positives = 206/358 (57%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETG---EMQDKHFHSIIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLE-VLESLGEMPLPPYIHEKLD----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKKNGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVS+F G E Y H+I YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSSFAGRELVLDAYHHSIQEHYRFFSFGDAMFIY 342
>gi|291459918|ref|ZP_06599308.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Oribacterium sp. oral taxon 078 str. F0262]
gi|291417259|gb|EFE90978.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Oribacterium sp. oral taxon 078 str. F0262]
Length = 341
Score = 467 bits (1202), Expect = e-129, Method: Composition-based stats.
Identities = 146/357 (40%), Positives = 204/357 (57%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M K+F F+LP +A P+ R S+RL+V+ ++ ++ + D +V
Sbjct: 1 MDTKDFYFELPKELVAQDPLEDRASSRLLVMDRRSG---RLTHRHFYEITDYFRPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G R ++ L R + + W RP K +++G + F
Sbjct: 58 LNDTKVIPARLLGCREGG----GAKVELLLLKRETKDEWECLVRPGKKLREGARVEF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L A ++ G ++ F GI E + +G +PLPPYI K +D Y
Sbjct: 111 -GGGILRAEILRTAEDGSRVVRFFYEGI-FEEVLDRLGEMPLPPYITHK----LQDRSRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
T YAK GS AAPTAGLH+T LL R+ +G+++ +TLHVG GTF PVK E ++H M
Sbjct: 165 NTVYAKHDGSAAAPTAGLHWTKPLLERVEEMGVEIARLTLHVGLGTFRPVKAERLEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I A+ +N KS+GGR++ GTTS R +E+A EDG I SG+T+IFI PG
Sbjct: 225 HSEYYRIPKSEAEKMNRCKSKGGRLICTGTTSCRSIESAAEEDGRIPARSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YRFRA+D L++NFHLP+STL+MLVSAF G E K Y A+ YRF+S+GD L+
Sbjct: 285 YRFRAMDGLITNFHLPESTLVMLVSAFAGREHILKAYAEAVRERYRFFSFGDAMLIL 341
>gi|260583655|ref|ZP_05851403.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Granulicatella elegans ATCC 700633]
gi|260158281|gb|EEW93349.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Granulicatella elegans ATCC 700633]
Length = 345
Score = 467 bits (1201), Expect = e-129, Method: Composition-based stats.
Identities = 148/358 (41%), Positives = 210/358 (58%), Gaps = 17/358 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++FDFDLP +IA P+ R S+RL+VV+ + D S++ +L D +V
Sbjct: 4 TTQDFDFDLPEEQIAQTPLKDRTSSRLLVVN---ETEHSVEDKHFSEIIDYLEEGDILVV 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNT+V+ A+L G + I L + W +P+K +K G ++ F
Sbjct: 61 NNTRVLPARLYGEK----EGTGAHIEVLLLHNTHGDCWETLVKPAKRMKVGTVVSF---- 112
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G RL+ATV ++ G ++ F G+ LE + +G +PLPPYI + D YQ
Sbjct: 113 GDGRLKATVTEELEQGGRIIEFQYDGVFLE-ILESLGEMPLPPYIKERLD----DQERYQ 167
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YAK GS AAPTAGLHFT L+ ++ GI++ +TLHVG GTF PV V+ +DH MH
Sbjct: 168 TVYAKENGSAAAPTAGLHFTKELMEKIQQKGIQIVPITLHVGLGTFRPVSVDHLEDHKMH 227
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWSGFTNIFITPG 300
SE I TA+ + K G R+++VGTTS+R LET + G I P SG+T+IFI+PG
Sbjct: 228 SEYYHISKETAEVIAETKKNGKRVIAVGTTSIRTLETVGSANQGEIVPSSGWTDIFISPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y F+ VD ++NFHLPKSTL+MLVSA+ G + T + Y HAI YRF+S+GD +++
Sbjct: 288 YEFKVVDAFITNFHLPKSTLVMLVSAYLGRDFTLEAYHHAIRERYRFFSFGDAMFVYR 345
>gi|313633141|gb|EFS00030.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
seeligeri FSL N1-067]
Length = 342
Score = 467 bits (1201), Expect = e-129, Method: Composition-based stats.
Identities = 154/357 (43%), Positives = 218/357 (61%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++L+ DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKATG---EIKDQHFTDILSYLHEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G + + I L + N+W +P+K I++G + F
Sbjct: 58 LNDTRVLPARLHGTK----DETGAHIEVLLLKQKEGNAWETLVKPAKRIRQGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+AT +++ G +L FS GI + +G +PLPPYI + D Y
Sbjct: 111 -GDGALKATCLEELEHGGRILEFSYEGI-FYEVLEQLGEMPLPPYIKEQLA----DQDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEDLLAKIKAKGVEIIFVTLHVGLGTFRPVDVEDTANHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + A+ +N VK GG++V+VGTTS+R LET A+ +G + SG+T IFI+P
Sbjct: 225 HSEFYRLTEEAAERINKVKETGGKVVAVGTTSIRTLETIASRHEGELVAESGWTEIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+AVD L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD +
Sbjct: 285 GYTFQAVDALITNFHLPKSTLIMLVSALSDRNKILTAYNHAVEQQYRFFSFGDAMFI 341
>gi|168486111|ref|ZP_02710619.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae CDC1087-00]
gi|183570814|gb|EDT91342.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae CDC1087-00]
Length = 342
Score = 467 bits (1201), Expect = e-129, Method: Composition-based stats.
Identities = 150/358 (41%), Positives = 205/358 (57%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETG---EMQDKHFHSIIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGSHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLE-VLESLGEMPLPPYIHEKLD----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFYGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGCELVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|302023597|ref|ZP_07248808.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus suis 05HAS68]
Length = 342
Score = 467 bits (1201), Expect = e-129, Method: Composition-based stats.
Identities = 160/357 (44%), Positives = 211/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RDS++L+++ + D + LN DA+V
Sbjct: 1 MNTADFDFDLPEELIAQVPLEKRDSSKLLILDREKQS---MVDSHFDHIIDQLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L N W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLYGYK----PETMGHVELLLLKNTQGNQWEVLAKPAKRLKVGTTVAF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL AT++++ G ++ FS GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATIVEELEHGGRIVEFSYEGIFLE-VLESLGEMPLPPYIHEK----LEDRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTQELLEKIEAKGVKLVYLTLHVGLGTFRPVSVDNVDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A AQ LN VK GRIV+VGTTS+R LET + DG + SG+TNIFI P
Sbjct: 225 HSEFYNLSAEAAQTLNQVKDSSGRIVAVGTTSIRTLETIGNKFDGRLEADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY FR VD +NFHLPKSTL+MLVSAF G E T Y+HA+ YRF+S+GD +
Sbjct: 285 GYTFRIVDAFSTNFHLPKSTLVMLVSAFAGREFTLDAYKHAVEERYRFFSFGDAMFI 341
>gi|117621432|ref|YP_856270.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
gi|166216695|sp|A0KJ19|QUEA_AERHH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|117562839|gb|ABK39787.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
Length = 355
Score = 466 bits (1200), Expect = e-129, Method: Composition-based stats.
Identities = 134/364 (36%), Positives = 204/364 (56%), Gaps = 16/364 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R ++RL+ + + D+ LN D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPMTERTASRLLQLDGQTGA---LRHGQFVDVLDQLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + +S + R SK K G L
Sbjct: 58 FNNTRVIPARMFGQKAS-----GGKLEVLVERMLDEHSVLAHVRSSKSPKPGTRLILDGG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
++EA + + + + + + + + +G +PLPPYI RP + D Y
Sbjct: 113 ADGEKVEAEMRARHDA--LFEIHFLDPRPVLEILEAIGHMPLPPYI--DRPDEDADKERY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G++ FVTLHVGAGTF PV+V+ +DH M
Sbjct: 169 QTVYNQKPGAVAAPTAGLHFDEPLLEKIRAKGVETAFVTLHVGAGTFQPVRVDKIEDHHM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT----TEDGIINPWSGFTNIF 296
HSE + A+ + ++RGGR+++VGTTS+R LE+A + + P+ T+IF
Sbjct: 229 HSEYAEVPQEVVDAIAATRARGGRVIAVGTTSVRSLESAAKVTLAQGKPLAPFFSDTDIF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+F+ VD +++NFHLP+STL+MLVSAF G + YQ A++ YRF+SYGD +
Sbjct: 289 IFPGYQFQVVDAMVTNFHLPESTLIMLVSAFAGYDNVMSAYQAAVAEQYRFFSYGDAMFV 348
Query: 357 FQKR 360
++R
Sbjct: 349 TRRR 352
>gi|322377318|ref|ZP_08051809.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sp. M334]
gi|321281518|gb|EFX58527.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus sp. M334]
Length = 342
Score = 466 bits (1200), Expect = e-129, Method: Composition-based stats.
Identities = 149/358 (41%), Positives = 206/358 (57%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETGK---MQDKHFHSIIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L + + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQK----EETGGHVELLLLKNTAGDEWEVLAKPAKRLKVGTRVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLE-VLESLGEMPLPPYIHEKLD----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VG+TS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAVTLRSVKENGGRVIAVGSTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|306829783|ref|ZP_07462972.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus mitis ATCC 6249]
gi|304428134|gb|EFM31225.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus mitis ATCC 6249]
Length = 342
Score = 466 bits (1200), Expect = e-129, Method: Composition-based stats.
Identities = 149/358 (41%), Positives = 205/358 (57%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETG---EFQDKHFHSIIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L + + W V A+P+K +K G ++F
Sbjct: 58 MNDTRVLPARLYGQK----EETGGHVELLLLKNTAGDEWEVLAKPAKRLKVGTRVNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V + G ++ F GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLSAVVTQELTHGGRIVRFEYQGIFLE-VLESLGEMPLPPYIHEKLD----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G + Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKFVDAFSTNFHLPKSTLVMLVSAFAGRDLVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|224476737|ref|YP_002634343.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus carnosus subsp. carnosus TM300]
gi|222421344|emb|CAL28158.1| putative S-adenosylmethionine tRNA ribosyltransferase
[Staphylococcus carnosus subsp. carnosus TM300]
Length = 341
Score = 466 bits (1200), Expect = e-129, Method: Composition-based stats.
Identities = 150/357 (42%), Positives = 213/357 (59%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EFD+DLP IA P+ RD++RL+V+H + D+ ++NS D +V
Sbjct: 1 MNIEEFDYDLPEELIAQTPLKDRDTSRLLVLHKENG---ELEHRHFKDIIEYINSGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L GV+ + ++ + ++ + W V +P+K IK G L F
Sbjct: 58 LNDTKVMPARLFGVK----QETKAKVEMLMLTQIEGDDWEVLLKPAKRIKVGQKLSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ ++EA I++ + G ++ S GI L+ ++ +G +PLPPYI + D Y
Sbjct: 111 -GEGKIEAECIEELDQGGRIMRLSYEGI-LQERLDELGEMPLPPYIKER----LEDQDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL L + G+ + F+TLHVG GTF PV V++ DDH M
Sbjct: 165 QTVYAKATGSAAAPTAGLHFTDELLDELKAKGVNLAFITLHVGLGTFRPVSVDNIDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN K G RI+SVGTTS R LET + SG+T+IFI PG
Sbjct: 225 HSEYYQMTQETADLLNQTKQNGKRIISVGTTSTRTLETIRRDYDTFTAASGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+A+D L++NFHLPKSTL+MLVSAF + Y+ A+ YRF+S+GD L+
Sbjct: 285 FEFKAIDGLITNFHLPKSTLVMLVSAFSSRQYILNAYRTAVEMKYRFFSFGDAMLII 341
>gi|329926750|ref|ZP_08281158.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Paenibacillus sp. HGF5]
gi|328938950|gb|EGG35318.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Paenibacillus sp. HGF5]
Length = 343
Score = 466 bits (1199), Expect = e-129, Method: Composition-based stats.
Identities = 146/359 (40%), Positives = 205/359 (57%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +DF+LP IA P+ R S+RL+ ++ IS +D+ LN D +V
Sbjct: 1 MNVDLYDFELPEHLIAQTPLLDRSSSRLLTLNKESG---QISHQTFADIIDSLNPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + + L + + W +P K +KKG+++ F
Sbjct: 58 LNDTKVIPARLFGEK----EDTGAKAEVLLLKNMGEDRWEALVKPGKKLKKGNVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L+A + ++ G L FS GI + + +G +PLPPYI K D Y
Sbjct: 111 -GDGKLKAVIEEEGEMGARTLSFSYKGI-FQEILDELGQMPLPPYIKEKLD----DRDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ + G+ + F+TLHVG GTF P+ V+ +DH+M
Sbjct: 165 QTVYAKHEGSAAAPTAGLHFTEALLEQIRAKGVDIAFITLHVGLGTFRPMSVDQVEDHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE--DGIINPWSGFTNIFIT 298
H E + TA LN K RGGR+++VGTTS R LET ++ + SG+T+IFI
Sbjct: 225 HEEYYSLSQETADLLNETKRRGGRVIAVGTTSCRTLETVGSQLKGEPLRESSGWTSIFIY 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY F VD L++NFHLPKSTL+MLVSA G E Y+ A+ YRF+S+GD ++
Sbjct: 285 PGYSFTVVDALITNFHLPKSTLVMLVSALAGREHIMHAYKEAVDKEYRFFSFGDAMFIY 343
>gi|228475167|ref|ZP_04059893.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus hominis SK119]
gi|314936247|ref|ZP_07843594.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus hominis subsp. hominis C80]
gi|228270778|gb|EEK12180.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus hominis SK119]
gi|313654866|gb|EFS18611.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus hominis subsp. hominis C80]
Length = 341
Score = 466 bits (1199), Expect = e-129, Method: Composition-based stats.
Identities = 148/357 (41%), Positives = 206/357 (57%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V+EFD+ LP S IA P+ RD +RL+V+ I+ +D+ + + D +V
Sbjct: 1 MNVEEFDYHLPESLIAQTPLKNRDQSRLLVLGRKTGN---IAHKHFTDIMDYFETGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + R+ N W V +P+K IK G+ L F
Sbjct: 58 LNDTRVMPARLFGLK----EETGAKVEMLMLTRIEDNDWEVLLKPAKRIKVGNTLSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++ A I + G ++ GI LE ++ +G +PLPPYI + D Y
Sbjct: 111 -GNGKIIAECIKELEQGGRIMRLHFEGI-LEERLDELGEMPLPPYIKERLD----DPDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ G+ + F+TLHVG GTF PV VED +DH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTDELLQKIKDKGVNIAFITLHVGLGTFRPVSVEDINDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN K G RI+SVGTTS R LET + SG+T+IFI PG
Sbjct: 225 HSEYYQMTKETADILNKTKENGHRIISVGTTSTRTLETIRRDHEQFVATSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ ++A+D L++NFHLPKSTL+MLVSAF E Y+ A+ YRF+S+GD L+
Sbjct: 285 FEYKAIDGLITNFHLPKSTLVMLVSAFSSREYILNAYKEAVKLKYRFFSFGDAMLII 341
>gi|261405411|ref|YP_003241652.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Paenibacillus sp. Y412MC10]
gi|261281874|gb|ACX63845.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Paenibacillus sp. Y412MC10]
Length = 343
Score = 466 bits (1199), Expect = e-129, Method: Composition-based stats.
Identities = 146/359 (40%), Positives = 206/359 (57%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +DF+LP IA P+ R S+RL+ ++ IS +D+ LN D +V
Sbjct: 1 MNVDLYDFELPEHLIAQTPLLDRSSSRLLTLNKKSG---QISHQTFADIIDSLNPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + + L + + W +P K +KKG+++ F
Sbjct: 58 LNDTKVIPARLFGEK----EDTGAKAEVLLLKNMGEDRWEALVKPGKKLKKGNVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L+A + ++ G L FS GI + + +G +PLPPYI K D Y
Sbjct: 111 -GDGKLKAVIEEEGEMGARTLSFSYKGI-FQEILDELGQMPLPPYIKEKLD----DRDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ + G+ + F+TLHVG GTF P+ V+ +DH+M
Sbjct: 165 QTVYAKHEGSAAAPTAGLHFTEALLEQIRAKGVDIAFITLHVGLGTFRPMSVDQVEDHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE--DGIINPWSGFTNIFIT 298
H E + TA LN K RGGR+++VGTTS R LET ++ ++ SG+T+IFI
Sbjct: 225 HEEYYSLSQETADLLNETKRRGGRVIAVGTTSCRTLETVGSQLKGEPLHESSGWTSIFIY 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY F VD L++NFHLPKSTL+MLVSA G E Y+ A+ YRF+S+GD ++
Sbjct: 285 PGYSFTVVDALITNFHLPKSTLVMLVSALAGREHIMHAYKEAVDKEYRFFSFGDAMFIY 343
>gi|295100843|emb|CBK98388.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Faecalibacterium prausnitzii L2-6]
Length = 342
Score = 466 bits (1199), Expect = e-129, Method: Composition-based stats.
Identities = 140/357 (39%), Positives = 198/357 (55%), Gaps = 15/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+ K+F +DLP IA P PRD+ARLMV+ I + DLP +L D +V
Sbjct: 1 MLKKDFWYDLPKELIAQEPASPRDAARLMVL---SQKDDSIQHRIFHDLPEYLEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN+KV+ A++ G++ L +V + W A+P K ++ G + F
Sbjct: 58 VNNSKVLPARIVGIK----QPTGAVCELLLLRQVKGDQWECLAKPGKRMQPGTKVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L A V + G + F L ++ G +PLPPYI ++ D Y
Sbjct: 111 -GDGSLTAIVDETLEDGNKFVTFYYDTETLYEKLDEFGKMPLPPYITKQLD----DQSQY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT L+ + + G+ + VTLHVG GTF PV+ ++ DH M
Sbjct: 166 QTVYAKELGSAAAPTAGLHFTPELMDTIRAKGVNITEVTLHVGLGTFRPVQEDEITDHKM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA+ ++ K+ G R+++VGTTS R LE + G I SG T+IF+ PG
Sbjct: 226 HSEWYSVSEETAKLIHDTKAAGHRVIAVGTTSCRTLEAVAAKYGEIKACSGNTDIFLYPG 285
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F +D L++NFHLP+STL+MLVSA G E+T Y+ A+ YRF+S+GD L+
Sbjct: 286 VKFNCIDGLITNFHLPESTLIMLVSALYGYEKTMAAYKVAVEQKYRFFSFGDAMLIL 342
>gi|212696227|ref|ZP_03304355.1| hypothetical protein ANHYDRO_00763 [Anaerococcus hydrogenalis DSM
7454]
gi|212676856|gb|EEB36463.1| hypothetical protein ANHYDRO_00763 [Anaerococcus hydrogenalis DSM
7454]
Length = 340
Score = 465 bits (1198), Expect = e-129, Method: Composition-based stats.
Identities = 145/356 (40%), Positives = 200/356 (56%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++FD++LP IA P RD +RLMVV D D+ +LN D +V
Sbjct: 1 MRTEDFDYNLPEELIAQHPADKRDFSRLMVVDRKTGQR---EDKHFYDIIDYLNEGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G R +E++I L + + W V +P K +K G F +
Sbjct: 58 MNDTRVIPARLFGHR----PEKEEKIEVFLLENIEKDKWEVLVKPGKKMKIGTKCIFSDE 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L V+D G ++ FS GI + + +G +PLPPYI K +D Y
Sbjct: 114 -----LSLEVVDIKEDGNRVVEFSYEGI-FQEILDRLGNMPLPPYIKEK----LKDKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GSVAAPTAGLHFT LL ++ G+K+ F+TL+VG GTF PVKV+D +H M
Sbjct: 164 QTVYSKNPGSVAAPTAGLHFTKELLKKIEDKGVKLAFITLNVGLGTFRPVKVDDVKNHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I +A +N K RI+S GTT+ R LE+ ++G I SG+T+IFI PG
Sbjct: 224 HSEYYQISKESADLINETKKNNKRIISTGTTTTRTLESVFKKNGQIKEDSGWTDIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
++F +D ++NFHLPKSTL+MLVSA E Y+ A+ YRF+S+GD L
Sbjct: 284 FKFNVIDCQITNFHLPKSTLIMLVSALANKEIILDAYKDAVEKKYRFFSFGDAMFL 339
>gi|329769851|ref|ZP_08261250.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Gemella
sanguinis M325]
gi|328837905|gb|EGF87529.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Gemella
sanguinis M325]
Length = 342
Score = 465 bits (1198), Expect = e-129, Method: Composition-based stats.
Identities = 149/358 (41%), Positives = 208/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EFDF LP IA P+ RD+++L+ ++ + SD+ + N D +V
Sbjct: 1 MKLEEFDFYLPEELIAQTPLLKRDTSKLLTINRK---ENTYEHKVFSDIIDYFNPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + I L N W +P+K IK G I+ F
Sbjct: 58 LNNTRVMPARLYGQK----KDTGAAIEVLLLKNKEHNMWECLVKPAKRIKVGSIVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +EA + + G F GI + ++ +GT+PLPPYI + D Y
Sbjct: 111 -GDGIMEAECVKVLDDGFRYFEFKYEGI-FQERLDELGTMPLPPYIKERLT----DKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT+ LL ++ G+ + ++TLHVG GTF PV VE+ +DH M
Sbjct: 165 QTVYSKEVGSSAAPTAGLHFTNELLDKIKQKGVNIVYLTLHVGLGTFRPVSVENIEDHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE +D TA +N K GGR+ SVGTTS R LET A DG I P SG+TNIFI P
Sbjct: 225 HSEYYTLDEETANVINETKKNGGRVFSVGTTSTRTLETIARDNDGEIVPASGWTNIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
G+ F+ VD L++NFHLPKS+L+MLVSAF E+ ++Y+ A+ + YRF+S+GD ++
Sbjct: 285 GFEFKCVDGLITNFHLPKSSLIMLVSAFYNREKVLELYKIAVENKYRFFSFGDAMIII 342
>gi|239637555|ref|ZP_04678527.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus warneri L37603]
gi|239596773|gb|EEQ79298.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus warneri L37603]
Length = 341
Score = 465 bits (1198), Expect = e-129, Method: Composition-based stats.
Identities = 145/357 (40%), Positives = 211/357 (59%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++FD+DLP S IA P+ RD +RL+V++ N + D+ + N D +V
Sbjct: 1 MNIEDFDYDLPESLIAQTPLKNRDQSRLLVLNRNNGN---MEHLHFKDVINYFNPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 58 LNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNQLNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++ A I++ + G ++ GI L+ ++ +G +PLPPYI + D Y
Sbjct: 111 -GDGKIIAECIEELDQGGRIMRLHYEGI-LQERLDELGEMPLPPYIKERLD----DPDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + + G+ + F+TLHVG GTF PV V++ DDH M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTDELLESIKAKGVNIAFITLHVGLGTFRPVSVDNIDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN + +G RI+SVGTTS R LET + SG+T+IFI PG
Sbjct: 225 HSEYYQMTQETADLLNETRKKGHRIISVGTTSTRTLETIRRDHSEFVEKSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ ++A+D L++NFHLPKSTL+MLVSAF E YQ A+ YRF+S+GD L+
Sbjct: 285 FEYKAIDGLITNFHLPKSTLVMLVSAFSSREYILNAYQKAVEMEYRFFSFGDAMLII 341
>gi|153009507|ref|YP_001370722.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Ochrobactrum anthropi ATCC 49188]
gi|166216733|sp|A6X0Y9|QUEA_OCHA4 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|151561395|gb|ABS14893.1| Queuosine biosynthesis protein [Ochrobactrum anthropi ATCC 49188]
Length = 363
Score = 465 bits (1198), Expect = e-129, Method: Composition-based stats.
Identities = 206/361 (57%), Positives = 252/361 (69%), Gaps = 9/361 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP IALRP PRD ARL+ V P D V +LP L DA+V
Sbjct: 1 MRVDLFDFDLPEESIALRPAEPRDHARLLRVRPG----QPFEDRQVFELPDLLQPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R N + +S TLHMR P+ W + RP K +K+GD + F
Sbjct: 57 FNDTKVIPAQLEGMRERDGNISQ--VSATLHMRTGPDRWKAFLRPGKRVKEGDRIRFGHS 114
Query: 121 DGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+ATV +K + GE LLVF +SG L+ I+ VG IPLPPYIA KR D RD
Sbjct: 115 GSSCFLGTLDATVAEKGDAGEALLVFDLSGAMLDEAIASVGHIPLPPYIASKRAEDERDR 174
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YA+ +G+VAAPTAGLHFT +LL ++ + G++ +FVTLHVGAGTF+PVK +DT D
Sbjct: 175 KDYQTVYAREEGAVAAPTAGLHFTPDLLEKIKAKGVEEHFVTLHVGAGTFLPVKADDTTD 234
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MHSEIG++ TA ALN+V RGG+I+ VGTTSLRL+E+A EDGII PW+G T+IFI
Sbjct: 235 HKMHSEIGYVSQRTADALNAVHERGGKIICVGTTSLRLIESAAGEDGIIRPWAGATDIFI 294
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGY+FRAVD+LM+NFHLP+STL MLVSAF G E Y+HAIS+ YRFYSYGD SLL
Sbjct: 295 TPGYKFRAVDLLMTNFHLPRSTLFMLVSAFSGFETMHAAYEHAISNGYRFYSYGDASLLE 354
Query: 358 Q 358
+
Sbjct: 355 R 355
>gi|289167559|ref|YP_003445828.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase, (queuosine
biosynthesis protein) [Streptococcus mitis B6]
gi|288907126|emb|CBJ21960.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase, (queuosine
biosynthesis protein) [Streptococcus mitis B6]
Length = 342
Score = 465 bits (1198), Expect = e-129, Method: Composition-based stats.
Identities = 148/358 (41%), Positives = 206/358 (57%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETG---EMQDKHFHSIIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L + + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQK----EETGGHVELLLLKNTAGDEWEVLAKPAKRLKVGTRVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLSAIVTEELTHGGRIVRFEYQGIFLE-VLESLGEMPLPPYIHEKLD----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ +G I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFEGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVS+F G E Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSSFAGRELVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|93278505|pdb|1YY3|A Chain A, Structure Of S-Adenosylmethionine:trna Ribosyltransferase-
Isomerase (Quea)
gi|93278506|pdb|1YY3|B Chain B, Structure Of S-Adenosylmethionine:trna Ribosyltransferase-
Isomerase (Quea)
Length = 346
Score = 465 bits (1198), Expect = e-129, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 209/357 (58%), Gaps = 17/357 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
V FDF+LP IA P+ RD++RLMV+ + ++D + +F N D +V
Sbjct: 6 KVDLFDFELPERLIAQVPLEQRDASRLMVLDKHTG---ELTDSSFKHIISFFNEGDCLVL 62
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNT+V+ A+L G + ++ L + + + W A+P+K +KKG ++ F
Sbjct: 63 NNTRVLPARLFGTK----EDTGAKVELLLLKQETGDKWETLAKPAKRVKKGTVVTF---- 114
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G RL+A ++ G + F GI + +G +PLPPYI + D YQ
Sbjct: 115 GDGRLKAICTEELEHGGRKMEFQYDGI-FYEVLESLGEMPLPPYIKEQLD----DKERYQ 169
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T Y+K GS AAPTAGLHFT +L +L G+++ F+TLHVG GTF PV ++ ++H MH
Sbjct: 170 TVYSKEIGSAAAPTAGLHFTEEILQQLKDKGVQIEFITLHVGLGTFRPVSADEVEEHNMH 229
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPG 300
+E + TA ALN V+ GGRI+SVGTTS R LET E DG SG+T+IFI PG
Sbjct: 230 AEFYQMSEETAAALNKVRENGGRIISVGTTSTRTLETIAGEHDGQFKASSGWTSIFIYPG 289
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+A+D +++NFHLPKS+L+MLVSA G E + Y HA+ YRF+S+GD L+
Sbjct: 290 YEFKAIDGMITNFHLPKSSLIMLVSALAGRENILRAYNHAVEEEYRFFSFGDAMLII 346
>gi|241204662|ref|YP_002975758.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|240858552|gb|ACS56219.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 361
Score = 465 bits (1198), Expect = e-129, Method: Composition-based stats.
Identities = 212/362 (58%), Positives = 254/362 (70%), Gaps = 6/362 (1%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRP PRDSARL+VV PN +SDH V DL +FL + DA+V
Sbjct: 1 MRVDLFDFDLPDERIALRPAEPRDSARLLVVDPN--AESHLSDHRVGDLTSFLRAGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R +++S TLHMR PN W +A+P K IK+GD + F
Sbjct: 59 FNDTKVIPAQLEGIRHR-DGAGGQQVSATLHMRTGPNRWKAFAKPGKRIKQGDRISFGHS 117
Query: 121 DGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+A V +K GE+ L+F +SG L+ I+ VG IPLPPYIA KRP D RD
Sbjct: 118 GESCFLGSLDAAVEEKGEAGEVTLLFDLSGPALDEAIAAVGHIPLPPYIAAKRPEDERDR 177
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YA+ +G+VAAPTAGLHFT L L GI+ +FVTLHVGAGTF+PVK +DTDD
Sbjct: 178 ADYQTIYAREEGAVAAPTAGLHFTPALFEALDKAGIERHFVTLHVGAGTFLPVKADDTDD 237
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH E G++ A A LN+V+ RGGRIV VGTTSLRL+E+A E G I PW+G T IFI
Sbjct: 238 HKMHLESGYVSAEIAARLNAVRERGGRIVCVGTTSLRLVESAAEEGGEIMPWAGATGIFI 297
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRF+AVD+LM+NFHLP+STL MLV+AF G E Y+HAIS YRFYSYGD SLLF
Sbjct: 298 TPGYRFKAVDMLMTNFHLPRSTLFMLVAAFAGFETMHAAYKHAISTGYRFYSYGDASLLF 357
Query: 358 QK 359
+K
Sbjct: 358 RK 359
>gi|270290975|ref|ZP_06197198.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pediococcus
acidilactici 7_4]
gi|270280371|gb|EFA26206.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pediococcus
acidilactici 7_4]
Length = 344
Score = 465 bits (1198), Expect = e-129, Method: Composition-based stats.
Identities = 141/357 (39%), Positives = 206/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++F++DLP IA P+ RD++R++V+ ++D D+ LN DAIV
Sbjct: 3 LTTEDFNYDLPHELIAQTPIKKRDASRMLVLDHKTG---EMADKHFYDIVDQLNPGDAIV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+++V+ A++ GV+ + L + + W +P++ K G + F
Sbjct: 60 MNDSRVMPARIYGVK----EETGGHLEVLLLHNIEGDRWETLVKPARRAKVGTKITF--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L ATV + + G + F GI + +G +PLPPYI K D Y
Sbjct: 113 -GDGSLTATVKKELDHGGREIEFEYDGI-FMEILEKLGEMPLPPYIKEKLD----DPERY 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLH+T LL ++ G+K+ ++TLHVG GTF PV E+ +DH M
Sbjct: 167 QTVYSKEPGSAAAPTAGLHWTKELLQKVQDKGVKLVYLTLHVGLGTFRPVDEENIEDHKM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + +A LN V+ GGRI++ GTTS+R LET T+ +G I P SG+T+IFI P
Sbjct: 227 HSEFYRLSEESAATLNEVRKNGGRIIATGTTSIRTLETIGTKFNGEIKPDSGWTDIFIKP 286
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY ++ VD ++NFHLPKSTL+MLV+AF G E Y+HA+ YRF+S+GD +
Sbjct: 287 GYEWKVVDAFITNFHLPKSTLVMLVAAFTGRETILNAYKHAVEEKYRFFSFGDAMFI 343
>gi|110633758|ref|YP_673966.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Mesorhizobium sp. BNC1]
gi|123057977|sp|Q11IH4|QUEA_MESSB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|110284742|gb|ABG62801.1| Queuosine biosynthesis protein [Chelativorans sp. BNC1]
Length = 358
Score = 465 bits (1198), Expect = e-129, Method: Composition-based stats.
Identities = 206/363 (56%), Positives = 257/363 (70%), Gaps = 11/363 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRP PRDSAR++VV P + D +V DLP FL DA+V
Sbjct: 1 MRVDLFDFDLPEERIALRPASPRDSARMLVVRPGK----PLEDCIVRDLPQFLRPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI A+L+G+R +I TLHMR P+ W + +P+K + G+ + F
Sbjct: 57 FNDTKVIPARLSGIRRRG--ETVAQIEATLHMRAGPDRWKAFLKPAKRVAVGERIQF-GH 113
Query: 121 DGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
DG+ L+ATV +K GE LLVF SG L+ I+ G +PLPPYIA KRP D RD
Sbjct: 114 DGESCFLGSLDATVAEKGEGGEALLVFDFSGPVLDEAIAAAGHVPLPPYIASKRPDDERD 173
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT YA+ +G+VAAPTAGLHFT +L S L +IG++ +FVTLHVGAGTF+PVK EDT+
Sbjct: 174 RADYQTIYAREEGAVAAPTAGLHFTPDLFSALDTIGVERHFVTLHVGAGTFLPVKAEDTE 233
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H MH+E G +D TA ALN+V++RGG I++VGTTSLRLLE+A G++ WSG T+IF
Sbjct: 234 AHRMHAEWGEVDGMTADALNAVRARGGCIIAVGTTSLRLLESAAEPSGLLKAWSGETDIF 293
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFRA+DILM+NFHLP+STL MLVSAF G+E K Y HAI YRFYSYGD+SLL
Sbjct: 294 ITPGYRFRAIDILMTNFHLPRSTLFMLVSAFSGLETMKSAYSHAIDQGYRFYSYGDSSLL 353
Query: 357 FQK 359
F++
Sbjct: 354 FRE 356
>gi|149191582|ref|ZP_01869828.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
shilonii AK1]
gi|148834600|gb|EDL51591.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
shilonii AK1]
Length = 350
Score = 465 bits (1198), Expect = e-129, Method: Composition-based stats.
Identities = 140/363 (38%), Positives = 198/363 (54%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R S+RL+ + N + D +D+ + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPKAERSSSRLLQLTGNTG---EVVDGSFTDIVDQVQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKIEVLVERMLDDKRVLAHVRSSKAPKPGTELFLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D L D E+ S + ++ +G +PLPPYI RP + D Y
Sbjct: 113 DEYQALMVARHDALFEIEM-----QSEKTVLDILNDIGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF +L ++ + G+ +VTLHVGAGTF PV+VE+ +DH M
Sbjct: 166 QTVYNEKPGAVAAPTAGLHFDDAVLEKIKAKGVNFAYVTLHVGAGTFQPVRVENINDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT---EDG-IINPWSGFTNIF 296
H+E + A+N K+ GGRI++VGTTS+R LE+A ++G + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAINETKANGGRIIAVGTTSVRSLESAAQDALKNGTELVPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY ++ VD L++NFHLP+STL+MLVSAF G + Y HA+ YRF+SYGD +
Sbjct: 286 IFPGYEYQLVDCLVTNFHLPESTLIMLVSAFAGYDNVMSAYHHAVEQKYRFFSYGDAMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 TKK 348
>gi|304385246|ref|ZP_07367591.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pediococcus
acidilactici DSM 20284]
gi|304328453|gb|EFL95674.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pediococcus
acidilactici DSM 20284]
Length = 347
Score = 465 bits (1197), Expect = e-129, Method: Composition-based stats.
Identities = 141/357 (39%), Positives = 206/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++F++DLP IA P+ RD++R++V+ ++D D+ LN DAIV
Sbjct: 6 LTTEDFNYDLPHELIAQTPIKKRDASRMLVLDHKTG---EMADKHFYDIVDQLNPGDAIV 62
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+++V+ A++ GV+ + L + + W +P++ K G + F
Sbjct: 63 MNDSRVMPARIYGVK----EETGGHLEVLLLHNIEGDRWETLVKPARRAKVGTKITF--- 115
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L ATV + + G + F GI + +G +PLPPYI K D Y
Sbjct: 116 -GDGSLTATVKKELDHGGREIEFEYDGI-FMEILEKLGEMPLPPYIKEKLD----DPERY 169
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLH+T LL ++ G+K+ ++TLHVG GTF PV E+ +DH M
Sbjct: 170 QTVYSKEPGSAAAPTAGLHWTKELLQKVQDKGVKLVYLTLHVGLGTFRPVDEENIEDHKM 229
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + +A LN V+ GGRI++ GTTS+R LET T+ +G I P SG+T+IFI P
Sbjct: 230 HSEFYRLSEESAATLNEVRKNGGRIIATGTTSIRTLETIGTKFNGEIKPDSGWTDIFIKP 289
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY ++ VD ++NFHLPKSTL+MLV+AF G E Y+HA+ YRF+S+GD +
Sbjct: 290 GYEWKVVDAFITNFHLPKSTLVMLVAAFTGRETILNAYKHAVEEKYRFFSFGDAMFI 346
>gi|55822510|ref|YP_140951.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus thermophilus CNRZ1066]
gi|81559694|sp|Q5M0W1|QUEA_STRT1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|55738495|gb|AAV62136.1| S-adenosylmethionine-tRNA ribosyltransferase-isomerase
[Streptococcus thermophilus CNRZ1066]
Length = 347
Score = 465 bits (1197), Expect = e-129, Method: Composition-based stats.
Identities = 158/359 (44%), Positives = 215/359 (59%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF+LP IA P+ RD+++L+V+ P ++D + LN DA+V
Sbjct: 1 MNTNDFDFELPEELIAQTPLKQRDASKLLVIDPVTR---EMTDTHFDHIIDQLNPRDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLYGEK----TDTHGHVEFLLLKNTQGDQWEVLAKPAKRLKVGAKVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV ++ + G ++ FS GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GYGRLTATVTEELDHGGRIVEFSYDGIFLE-VLESLGEMPLPPYIHEK----LEDRDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTPELLQKIEAKGVKLVYLTLHVGLGTFRPVSVDNIDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A LNSVK+ GGRIV+VGTTS+R LET + DG + SG+TNIFI P
Sbjct: 225 HSEFYTLSQEAADTLNSVKTAGGRIVAVGTTSIRTLETIGNKYDGQLQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
GY+F VD +NFHLPKSTL+MLVSAF G E + Y+HA+ YRF+S+GD + +
Sbjct: 285 GYQFTVVDAFSTNFHLPKSTLVMLVSAFAGREFVLEAYKHAVQERYRFFSFGDAMFVTR 343
>gi|160934267|ref|ZP_02081654.1| hypothetical protein CLOLEP_03138 [Clostridium leptum DSM 753]
gi|156866940|gb|EDO60312.1| hypothetical protein CLOLEP_03138 [Clostridium leptum DSM 753]
Length = 341
Score = 465 bits (1197), Expect = e-129, Method: Composition-based stats.
Identities = 140/350 (40%), Positives = 193/350 (55%), Gaps = 17/350 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ PRD +RLMV+ I D+ FLN D ++
Sbjct: 1 MKTSDFYYDLPEELIAQTPIEPRDHSRLMVLDKKTGS---IGHRHFYDIIEFLNPGDCLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+++V+ A++ G++ ++ L N W V A P K K G F
Sbjct: 58 LNDSRVLPARIYGIK----EGTGSQVEFLLLTHKEENVWEVLAGPGKKAKPGARFIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE--LERQISLVGTIPLPPYIARKRPIDARDYV 178
G L+A V++ G ++ F E + +G +PLPPYI ++
Sbjct: 111 -GNGLLKAEVLEVVEGGNRVIRFEFDPKEGNFYNILDRIGQMPLPPYITKRLEN----KE 165
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y+K GS AAPTAGLHFT LL +L + GI++ FVTLHVG GTF PVKV+D +H
Sbjct: 166 RYQTVYSKELGSAAAPTAGLHFTPELLEKLKNKGIRLGFVTLHVGLGTFRPVKVDDVTEH 225
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE I A + K GGR++ VGTTS R +E+ T +G I G+TNIFI
Sbjct: 226 KMHSEHYEISQEVADLILETKKNGGRVIGVGTTSCRTVESVATFEGQIKASEGWTNIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
PGY F+ +D L++NFHLP+STL+MLVSAF G + T + Y+ A+ YRF+
Sbjct: 286 PGYEFKVLDGLITNFHLPESTLIMLVSAFAGYDHTMQAYKTAVQERYRFF 335
>gi|304407535|ref|ZP_07389187.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Paenibacillus curdlanolyticus YK9]
gi|304343486|gb|EFM09328.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Paenibacillus curdlanolyticus YK9]
Length = 348
Score = 465 bits (1197), Expect = e-129, Method: Composition-based stats.
Identities = 143/360 (39%), Positives = 210/360 (58%), Gaps = 15/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP IA P+ R +RL+ ++ D+ ++ D +V
Sbjct: 1 MNVDLFDFELPEELIAQTPLVERTGSRLLTLNKRTGET---QHGTFLDIEQYVQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF-S 119
N+T+VI A+L G++ ++ L + N W A+P+K ++ G L F
Sbjct: 58 LNDTRVIPARLFGIK----RDTGAKVELLLLKAIGDNRWEALAKPAKRLRIGTELAFGMD 113
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ G+ L A + ++ G ++ F GI + + +G +PLPPYI K D
Sbjct: 114 EAGEPLLRAVIEEEGEHGSRIVRFEYEGI-FQELLDRLGEMPLPPYIKEKLD----DRER 168
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ +GS AAPTAGLHFT+ LL +L G+ + +VTLHVG GTF P+ V+ ++H+
Sbjct: 169 YQTVYARHEGSAAAPTAGLHFTTELLEQLQRKGVGIAYVTLHVGLGTFRPMSVDTVEEHV 228
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT--EDGIINPWSGFTNIFI 297
MHSE + TAQ + KSRGGRI++VGTTS R LE+A + DG + SG+T+IFI
Sbjct: 229 MHSEYFELSETTAQQIVETKSRGGRIIAVGTTSARTLESAASMFTDGQVQACSGWTDIFI 288
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY F+ VD L++NFHLPKSTL+MLVSA G + + Y+ A++ YRF+S+GD L++
Sbjct: 289 FPGYSFKLVDALLTNFHLPKSTLVMLVSALAGRDAIMQAYREAVALQYRFFSFGDAMLIY 348
>gi|317128205|ref|YP_004094487.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Bacillus
cellulosilyticus DSM 2522]
gi|315473153|gb|ADU29756.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Bacillus
cellulosilyticus DSM 2522]
Length = 342
Score = 465 bits (1197), Expect = e-129, Method: Composition-based stats.
Identities = 142/358 (39%), Positives = 203/358 (56%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDF LP IA P+ R ++RL+V++ I DL + + D +V
Sbjct: 1 MDVTQFDFHLPEELIAQTPLADRTASRLLVLNRENGS---IEHRHFKDLLQYFSKGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKV+ A+L G++ +I L S +W +P+K +K G +
Sbjct: 58 LNNTKVLPARLFGIK----EDTGAKIELLLLREESDYTWEALVKPAKRVKIGTKIVI--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L +++ G + F GI + +G +PLPPYI + +D +D Y
Sbjct: 111 -GEGKLIGKCVEELPEGIRKIQFEFDGI-FNEILDELGEMPLPPYIQEQ--LDEKD--RY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +AK GS AAPTAGLHFT LL + +G+ + F+TLHVG GTF PV VE+ +H M
Sbjct: 165 QTVFAKHSGSAAAPTAGLHFTKELLQNIEQLGVHIVFITLHVGLGTFRPVAVENVKEHTM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H E + + A LN +S G +I++VGTTS+R LET A+ DG SG+TNIFI P
Sbjct: 225 HEEYYDMTSEAASVLNEARSNGNKIIAVGTTSVRTLETIASKHDGAFTASSGWTNIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY+++A+D +++NFHLPKSTL+MLVSAF G Y A+ YRF+S+GD L+
Sbjct: 285 GYQYKAIDGMITNFHLPKSTLVMLVSAFAGRGNILSAYNAAVEKKYRFFSFGDAMLII 342
>gi|254506743|ref|ZP_05118883.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
parahaemolyticus 16]
gi|219550324|gb|EED27309.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
parahaemolyticus 16]
Length = 360
Score = 465 bits (1197), Expect = e-129, Method: Composition-based stats.
Identities = 137/363 (37%), Positives = 206/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N + D +D+ + D +V
Sbjct: 11 MQVSDFHFDLPDELIARYPQPERTASRLLQMDGNTG---ELVDGTFTDVLEQVQPGDLVV 67
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + S + R SK K G +
Sbjct: 68 FNNTRVIPARMFGRKES-----GGKLEVLVERVLDEKSILAHVRCSKSPKPGTTIFIGEN 122
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D A ++ + + + + + + + +G +PLPPYI RP + D Y
Sbjct: 123 D---EYSAEMVARHDA--LFELKFNAEQNVLAVLEEIGHMPLPPYI--DRPDEDSDKERY 175
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G++ +VTLHVGAGTF PVKV++ ++H M
Sbjct: 176 QTVYNEKPGAVAAPTAGLHFDEPLLEKIKAKGVEFAYVTLHVGAGTFQPVKVDNINEHHM 235
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + A+N+ K+RGGRI++VGTTS+R LE+A + + P+ G T IF
Sbjct: 236 HAEYVEVPQEVVDAINATKARGGRIIAVGTTSVRSLESAAQDAIKKGTELAPFFGDTEIF 295
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY ++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ + YRF+SYGD+ +
Sbjct: 296 IFPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYENTMNAYKHAVENKYRFFSYGDSMFI 355
Query: 357 FQK 359
+K
Sbjct: 356 KKK 358
>gi|154686913|ref|YP_001422074.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
amyloliquefaciens FZB42]
gi|166216699|sp|A7Z767|QUEA_BACA2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|154352764|gb|ABS74843.1| QueA [Bacillus amyloliquefaciens FZB42]
Length = 342
Score = 465 bits (1196), Expect = e-129, Method: Composition-based stats.
Identities = 148/358 (41%), Positives = 208/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP IA P+ RD++RLMV+ ++D ++ +F N D +V
Sbjct: 1 MKVDLFDFELPERLIAQVPLKERDASRLMVLDKQTGG---LTDSSFKEIVSFFNEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + ++ L + ++W +P+K +KKG +L F
Sbjct: 58 LNNTRVLPARLFGTK----EDTGAKVELLLLKQEENDTWETLVKPAKRVKKGTVLTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A ++ + G + F GI + +G +PLPPYI + D Y
Sbjct: 111 -GDGRLTAVCTEELDHGGRKIEFRYDGI-FYEVLESLGEMPLPPYIKEQLD----DKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT ++K GS AAPTAGLHFT +L L G+++ F+TLHVG GTF PV +D ++H M
Sbjct: 165 QTVFSKEIGSAAAPTAGLHFTEEILDELKQKGVRIEFITLHVGLGTFRPVSADDVEEHNM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
H+E + TA +LN V+ GGRIVSVGTTS R LET E DG SG+T+IFI P
Sbjct: 225 HAEFYEMTEETAASLNEVRKAGGRIVSVGTTSTRTLETIAGEHDGEFTASSGWTSIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY F+A+D +++NFHLPKS+L+MLVSA G E Y+HA+ YRF+S+GD L+
Sbjct: 285 GYEFKAIDGMITNFHLPKSSLIMLVSALAGREHVLSAYRHAVEEEYRFFSFGDAMLII 342
>gi|320546395|ref|ZP_08040710.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus equinus ATCC 9812]
gi|320448780|gb|EFW89508.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus equinus ATCC 9812]
Length = 342
Score = 465 bits (1196), Expect = e-129, Method: Composition-based stats.
Identities = 158/357 (44%), Positives = 213/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF+LP IA P+ RDS++L+V+ N + D + LN DA+V
Sbjct: 1 MNTNDFDFNLPEELIAQTPLEKRDSSKLLVIDRNT---HEMVDAHFDHILDELNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGEK----PETHGHVELLLLKNTEGDKWEVLAKPAKRLRVGTKVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+++ + G ++ F GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVVEELDNGGRIVEFDYGGIFLE-VLESLGEMPLPPYIHEKLD----DPDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ +VTLHVG GTF PV V++ ++H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTKELLEKIEAKGVKLVYVTLHVGLGTFRPVSVDNVEEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ GGRIV+VGTTS+R LET ++ +G I SG+TNIFI P
Sbjct: 225 HSEFYRLSEEAAQTLRDVKATGGRIVAVGTTSIRTLETIGSKFNGEIKADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+ VD +NFHLPKSTL+MLVSAF G E + YQHAI YRF+S+GD +
Sbjct: 285 GYEFKVVDAFSTNFHLPKSTLVMLVSAFAGREFVLEAYQHAIDERYRFFSFGDAMFV 341
>gi|307317196|ref|ZP_07596637.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Sinorhizobium meliloti AK83]
gi|306897284|gb|EFN28029.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Sinorhizobium meliloti AK83]
Length = 360
Score = 465 bits (1196), Expect = e-129, Method: Composition-based stats.
Identities = 215/362 (59%), Positives = 257/362 (70%), Gaps = 6/362 (1%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP + IALRP PRDSAR++VV P+ V+ D V DLP+FL DA+V
Sbjct: 1 MRVDLFDFDLPENSIALRPASPRDSARMLVVRPD--GAPVLEDRGVLDLPSFLRPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL GVR+ +S TLHMRV+P+ W +ARP++ +K GD + F
Sbjct: 59 FNDTKVIPAQLEGVRYRG-EDISTPVSLTLHMRVAPSRWKAFARPARRLKPGDRISFGHG 117
Query: 121 DGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
LEA V +K + GE+ L F +SG L+ I VG IPLPPYIA KR D RD
Sbjct: 118 GNACLLGSLEAVVEEKGDAGEVTLRFDLSGPSLDEAIMAVGHIPLPPYIASKRADDERDR 177
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YA+ +G+VAAPTAGLHFT L ++L GI+ YFVTLHVGAGTF+PVK +DT D
Sbjct: 178 TDYQTVYAREEGAVAAPTAGLHFTDRLFAKLDEGGIERYFVTLHVGAGTFLPVKADDTAD 237
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H+MH EIG +D TA LN+V+ RGGRIV VGTTSLRL+E+A EDG I PWSG T IFI
Sbjct: 238 HVMHEEIGHVDPVTAAKLNAVRERGGRIVCVGTTSLRLIESAAAEDGNIRPWSGATGIFI 297
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFRAVD+LM+NFHLPKSTL MLVSAF G+E Y HAI+ YRFYSYGD+SLLF
Sbjct: 298 TPGYRFRAVDMLMTNFHLPKSTLFMLVSAFAGLETMHAAYAHAIATGYRFYSYGDSSLLF 357
Query: 358 QK 359
+K
Sbjct: 358 RK 359
>gi|163802454|ref|ZP_02196347.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio sp.
AND4]
gi|159173755|gb|EDP58570.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio sp.
AND4]
Length = 350
Score = 465 bits (1196), Expect = e-129, Method: Composition-based stats.
Identities = 142/363 (39%), Positives = 206/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N + D +D+ + + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQPERTASRLLQMDGNTG---ELVDGTFTDVLDQIQAGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + S + R SK K G +
Sbjct: 58 FNNTRVIPARMFGRKES-----GGKLEVLVERMLDEKSILAHVRCSKSPKPGTTILVGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D A ++ + + + + + + + +G +PLPPYI RP D D Y
Sbjct: 113 D---EYTAQMVARHDA--LFELKFNADKTVLEILEEIGHMPLPPYI--DRPDDDSDKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G + +VTLHVGAGTF PVKV+D +DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDDILLEKIKAKGAEFAYVTLHVGAGTFQPVKVDDINDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + A+N+ K+RGGRIV+VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAINATKARGGRIVAVGTTSVRSLESAAQDALKKGTELVPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY ++ VD L++NFHLP+STL+MLVSAF G E T YQHA+ + YRF+SYGD+ +
Sbjct: 286 IYPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYENTMNAYQHAVENQYRFFSYGDSMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 KKK 348
>gi|260899307|ref|ZP_05907702.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
parahaemolyticus AQ4037]
gi|308106664|gb|EFO44204.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
parahaemolyticus AQ4037]
Length = 350
Score = 464 bits (1195), Expect = e-129, Method: Composition-based stats.
Identities = 139/363 (38%), Positives = 206/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N + D +D+ + + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQPERTASRLLQMDGNTG---ELIDGTFTDVLNQVQAGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + S + R SK K G +
Sbjct: 58 FNNTRVIPARMFGRKES-----GGKLEVLVERMLDEKSILAHVRCSKSPKPGTTIIVGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D A ++ + + + + S + + +G +PLPPYI RP + D Y
Sbjct: 113 D---EYSAEMVARHDA--LFELKFNSDKTVLEILEEIGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G + +VTLHVGAGTF PVKV++ +DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDDVLLDKIKAKGAEFAYVTLHVGAGTFQPVKVDNINDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + A+N+ K+RGGRI++VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAINATKARGGRIIAVGTTSVRSLESAAQDALKKGSELVPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY ++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ + YRF+SYGD+ +
Sbjct: 286 IYPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYENTMNAYKHAVENKYRFFSYGDSMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 KKK 348
>gi|330683929|gb|EGG95696.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus epidermidis VCU121]
Length = 341
Score = 464 bits (1195), Expect = e-129, Method: Composition-based stats.
Identities = 144/357 (40%), Positives = 209/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++FD+DLP S IA P+ RD +RL+V++ + D+ + N D +V
Sbjct: 1 MNIEDFDYDLPESLIAQTPLKNRDQSRLLVLNRKNGN---MEHLHFKDVINYFNPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 58 LNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNQLNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++ A I++ + G ++ GI L+ ++ +G +PLPPYI + D Y
Sbjct: 111 -GDGKIIAECIEELDQGGRIMRLHYEGI-LQERLDELGEMPLPPYIKERLD----DPDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + + G+ + F+TLHVG GTF PV V++ DDH M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTDELLESIKAKGVNIAFITLHVGLGTFRPVSVDNIDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN + G RI+SVGTTS R LET + SG+T+IFI PG
Sbjct: 225 HSEYYQMMQETADLLNKTRKNGHRIISVGTTSTRTLETIRRDHSEFVEKSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ ++A+D L++NFHLPKSTL+MLVSAF E YQ A+ YRF+S+GD L+
Sbjct: 285 FEYKAIDGLITNFHLPKSTLVMLVSAFSSREYILNAYQKAVEMEYRFFSFGDAMLII 341
>gi|25010872|ref|NP_735267.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae NEM316]
gi|77413595|ref|ZP_00789782.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae 515]
gi|46577062|sp|Q8E611|QUEA_STRA3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|23095251|emb|CAD46461.1| Unknown [Streptococcus agalactiae NEM316]
gi|77160361|gb|EAO71485.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae 515]
Length = 342
Score = 464 bits (1195), Expect = e-129, Method: Composition-based stats.
Identities = 153/357 (42%), Positives = 209/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L+V+ ++D + L DA+V
Sbjct: 1 MNTNDFDFYLPEELIAQTPLEKRDASKLLVIDHK---NKTMTDSHFDHILDELKPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + I L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGEK----PDTHGHIELLLLKNTEGDQWEVLAKPAKRLRVGTKVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV + G ++ FS GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLIATVTKELEHGGRIVEFSYDGIFLE-VLESLGEMPLPPYIHEK----LEDRDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTKELLEKIETKGVKLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A LN+VK GGRIV+VGTTS+R LET ++ +G + SG+TNIFI P
Sbjct: 225 HSEFYQLSKEAADTLNAVKESGGRIVAVGTTSIRTLETIGSKFNGELKADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ VD +NFHLPKSTL+MLVSAF G + + Y HA+ YRF+S+GD +
Sbjct: 285 GYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYNHAVEERYRFFSFGDAMFV 341
>gi|22536961|ref|NP_687812.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae 2603V/R]
gi|76787449|ref|YP_329544.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae A909]
gi|76798552|ref|ZP_00780784.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae 18RS21]
gi|77406569|ref|ZP_00783618.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae H36B]
gi|77411332|ref|ZP_00787680.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae CJB111]
gi|46577057|sp|Q8E0D7|QUEA_STRA5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|91207329|sp|Q3K1Q9|QUEA_STRA1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|22533815|gb|AAM99684.1|AE014228_5 S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae 2603V/R]
gi|76562506|gb|ABA45090.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae A909]
gi|76586086|gb|EAO62612.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae 18RS21]
gi|77162592|gb|EAO73555.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae CJB111]
gi|77174822|gb|EAO77642.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae H36B]
Length = 342
Score = 464 bits (1195), Expect = e-129, Method: Composition-based stats.
Identities = 152/357 (42%), Positives = 209/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L+V+ ++D + L DA+V
Sbjct: 1 MNTNDFDFYLPEELIAQTPLEKRDASKLLVIDHK---NKTMTDSHFDHILDELKPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGEK----QDTHGHVELLLLKNTEGDQWEVLAKPAKRLRVGTKVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV + G ++ FS GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLIATVTKELEHGGRIVEFSYDGIFLE-VLESLGEMPLPPYIHEK----LEDRDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTKELLEKIETKGVKLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A LN+VK GGRIV+VGTTS+R LET ++ +G + SG+TNIFI P
Sbjct: 225 HSEFYQLSKEAADTLNAVKESGGRIVAVGTTSIRTLETIGSKFNGELKADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ VD +NFHLPKSTL+MLVSAF G + + Y HA+ YRF+S+GD +
Sbjct: 285 GYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYNHAVEERYRFFSFGDAMFV 341
>gi|15965338|ref|NP_385691.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sinorhizobium meliloti 1021]
gi|21263893|sp|Q92PY5|QUEA_RHIME RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|15074518|emb|CAC46164.1| Probable S-adenosylmethionine:tRNA
ribosyltransferase-isomerase(queuosine biosynthesis
protein QueA) [Sinorhizobium meliloti 1021]
Length = 360
Score = 464 bits (1195), Expect = e-129, Method: Composition-based stats.
Identities = 215/362 (59%), Positives = 257/362 (70%), Gaps = 6/362 (1%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP + IALRP PRDSAR++VV P+ V+ D V DLP+FL DA+V
Sbjct: 1 MRVDLFDFDLPENSIALRPASPRDSARMLVVRPD--GAPVLEDRGVLDLPSFLRPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL GVR+ +S TLHMRV+P+ W +ARP++ +K GD + F
Sbjct: 59 FNDTKVIPAQLEGVRYRG-EDISTPVSLTLHMRVAPSRWKAFARPARRLKPGDRISFGHG 117
Query: 121 DGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
LEA V +K + GE+ L F +SG L+ I VG IPLPPYIA KR D RD
Sbjct: 118 GSACLLGSLEAVVEEKGDAGEVTLRFDLSGPSLDEAIMAVGHIPLPPYIASKRADDERDR 177
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YA+ +G+VAAPTAGLHFT L ++L GI+ YFVTLHVGAGTF+PVK +DT D
Sbjct: 178 TDYQTVYAREEGAVAAPTAGLHFTDRLFAKLDEGGIERYFVTLHVGAGTFLPVKADDTAD 237
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H+MH EIG +D TA LN+V+ RGGRIV VGTTSLRL+E+A EDG I PWSG T IFI
Sbjct: 238 HVMHEEIGHVDPVTAAKLNAVRERGGRIVCVGTTSLRLIESAAAEDGNIRPWSGATGIFI 297
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFRAVD+LM+NFHLPKSTL MLVSAF G+E Y HAI+ YRFYSYGD+SLLF
Sbjct: 298 TPGYRFRAVDMLMTNFHLPKSTLFMLVSAFAGLETMHAAYAHAIATGYRFYSYGDSSLLF 357
Query: 358 QK 359
+K
Sbjct: 358 RK 359
>gi|315645788|ref|ZP_07898909.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Paenibacillus vortex V453]
gi|315278549|gb|EFU41863.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Paenibacillus vortex V453]
Length = 343
Score = 464 bits (1195), Expect = e-129, Method: Composition-based stats.
Identities = 147/359 (40%), Positives = 209/359 (58%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +DF+LP IA P+ R S+RL+ ++ I+ +D+ LN+ D +V
Sbjct: 1 MNVDLYDFELPEQLIAQTPLLDRSSSRLLTLNKESG---QINHQTFADIIDSLNAGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + + L + + W +P K +KKG+++ F
Sbjct: 58 LNDTKVIPARLFGEK----EDTGAKAEVLLLKSMGQDRWEALVKPGKKLKKGNVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L+A + ++ G L FS GI + + +G +PLPPYI K D Y
Sbjct: 111 -GDGKLKAVIEEEGEMGARTLSFSYKGI-FQEILDELGQMPLPPYIKEKLD----DRDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ + G+ + F+TLHVG GTF P+ V+ +DH+M
Sbjct: 165 QTVYAKHEGSAAAPTAGLHFTEALLEQIRAKGVDIAFITLHVGLGTFRPMSVDVVEDHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGI-INPWSGFTNIFIT 298
H E + TA LN K RGGR+++VGTTS R LET ++ +G + SG+T+IFI
Sbjct: 225 HEEYYSLSQETADLLNETKRRGGRVIAVGTTSCRTLETVGSQMNGEPLRESSGWTSIFIY 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY F VD L++NFHLPKSTL+MLVSA G E K Y+ A+ YRF+S+GD ++
Sbjct: 285 PGYSFTVVDALITNFHLPKSTLVMLVSALAGREHIMKAYKEAVEDKYRFFSFGDAMFIY 343
>gi|52081250|ref|YP_080041.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
licheniformis ATCC 14580]
gi|52786630|ref|YP_092459.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
licheniformis ATCC 14580]
gi|319644783|ref|ZP_07999016.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
sp. BT1B_CT2]
gi|81609021|sp|Q65GP8|QUEA_BACLD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|52004461|gb|AAU24403.1| S-adenosylmethionine tRNA ribosyltransferase [Bacillus
licheniformis ATCC 14580]
gi|52349132|gb|AAU41766.1| QueA [Bacillus licheniformis ATCC 14580]
gi|317392592|gb|EFV73386.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
sp. BT1B_CT2]
Length = 342
Score = 464 bits (1194), Expect = e-128, Method: Composition-based stats.
Identities = 152/357 (42%), Positives = 207/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V+ FDFDLP IA P+ RD++RLMV+ I+ + FLN+ D IV
Sbjct: 1 MKVELFDFDLPERLIAQVPLKERDASRLMVLDKKTG---EITHSTFKHVIDFLNAGDCIV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L GV+ ++ L + + W +P+K +K+G +L F
Sbjct: 58 LNDTRVLPARLYGVK----EETGAKVEVLLLKQEEGDVWETLVKPAKRVKRGTVLSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A ++ G + F GI + +G +PLPPYI + D Y
Sbjct: 111 -GDGRLTAVCTEELEHGGRKIEFRYEGI-FYEVLESLGEMPLPPYIKEQLD----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K QGS AAPTAGLHFT +L L G+ + F+TLHVG GTF PV E+ ++H M
Sbjct: 165 QTVYSKKQGSAAAPTAGLHFTEEILDALREKGVHIAFITLHVGLGTFRPVSAENVEEHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN V+ GGRI+SVGTTS R LET A+ DG SG+T+IFI P
Sbjct: 225 HAEFYEMSEETAALLNRVRQEGGRIISVGTTSTRTLETIASEHDGRFREASGWTSIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY FRA+D +++NFHLPKS+L+MLVSA G E Y+ A+ H YRF+S+GD L+
Sbjct: 285 GYTFRAIDGMITNFHLPKSSLIMLVSALAGREHVLSAYRTAVEHEYRFFSFGDAMLI 341
>gi|298291669|ref|YP_003693608.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Starkeya
novella DSM 506]
gi|296928180|gb|ADH88989.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Starkeya
novella DSM 506]
Length = 364
Score = 464 bits (1194), Expect = e-128, Method: Composition-based stats.
Identities = 190/363 (52%), Positives = 250/363 (68%), Gaps = 6/363 (1%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLPP RIALRPV PRD+AR++VV P ++D V DL L DA+V
Sbjct: 1 MRVDLFDFDLPPERIALRPVSPRDAARMLVVRP--GATPELADAHVHDLANLLQPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREK-EISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
N+T+V+ A+L+G+R ++ E + LH RV+P+ W ARP+K + GD + F
Sbjct: 59 VNDTRVVPARLDGIRRRETSQGEGVRVEAMLHKRVAPDRWLALARPAKRLAPGDRIAFGG 118
Query: 120 QDGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
+ L+ATV K GEI L F ++G L+ I+ VG IPLPPYIA KRP DA+D
Sbjct: 119 EGNACLLGTLDATVEGKGEAGEIELRFDLAGAALDEAIAAVGHIPLPPYIAAKRPDDAQD 178
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT +A +GSVAAPTAGLHFT L++RL G++ + VTLHVGAGTF+PVK +DT
Sbjct: 179 RADYQTMFAAHEGSVAAPTAGLHFTPELIARLEERGVETHRVTLHVGAGTFLPVKADDTT 238
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H MH+E G + A TA ALN+VK+RGGR++++GTT+ RL+E+A +E G ++ W G T+IF
Sbjct: 239 GHRMHAEWGEVSAETAVALNAVKARGGRVITIGTTATRLIESAASEGGRLDAWRGETDIF 298
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFR +D +++NFHLP+STL+MLV+AF G E K+ Y HAI+ YRFYSYGD LL
Sbjct: 299 ITPGYRFRFIDGMLTNFHLPRSTLVMLVAAFIGHEVQKRAYAHAIASGYRFYSYGDACLL 358
Query: 357 FQK 359
K
Sbjct: 359 LPK 361
>gi|307312710|ref|ZP_07592341.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Sinorhizobium meliloti BL225C]
gi|306899435|gb|EFN30067.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Sinorhizobium meliloti BL225C]
Length = 360
Score = 464 bits (1194), Expect = e-128, Method: Composition-based stats.
Identities = 215/362 (59%), Positives = 256/362 (70%), Gaps = 6/362 (1%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP + IALRP PRDSAR++VV P+ V D V DLP+FL DA+V
Sbjct: 1 MRVDLFDFDLPENSIALRPASPRDSARMLVVRPD--GAPVFEDRGVLDLPSFLRPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL GVR+ +S TLHMRV+P+ W +ARP++ +K GD + F
Sbjct: 59 FNDTKVIPAQLEGVRYRG-EDISTPVSLTLHMRVAPSRWKAFARPARRLKPGDRISFGHG 117
Query: 121 DGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
LEA V +K + GE+ L F +SG L+ I VG IPLPPYIA KR D RD
Sbjct: 118 GSACLLGSLEAVVEEKGDAGEVTLRFDLSGPSLDEAIMAVGHIPLPPYIASKRADDERDR 177
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YA+ +G+VAAPTAGLHFT L ++L GI+ YFVTLHVGAGTF+PVK +DT D
Sbjct: 178 TDYQTVYAREEGAVAAPTAGLHFTDRLFAKLDEGGIERYFVTLHVGAGTFLPVKADDTAD 237
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H+MH EIG +D TA LN+V+ RGGRIV VGTTSLRL+E+A EDG I PWSG T IFI
Sbjct: 238 HVMHEEIGHVDPVTAAKLNAVRERGGRIVCVGTTSLRLIESAAAEDGNIRPWSGATGIFI 297
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFRAVD+LM+NFHLPKSTL MLVSAF G+E Y HAI+ YRFYSYGD+SLLF
Sbjct: 298 TPGYRFRAVDMLMTNFHLPKSTLFMLVSAFAGLETMHAAYAHAIATGYRFYSYGDSSLLF 357
Query: 358 QK 359
+K
Sbjct: 358 RK 359
>gi|313892068|ref|ZP_07825666.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Dialister
microaerophilus UPII 345-E]
gi|329120931|ref|ZP_08249563.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Dialister
micraerophilus DSM 19965]
gi|313119520|gb|EFR42714.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Dialister
microaerophilus UPII 345-E]
gi|327471390|gb|EGF16841.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Dialister
micraerophilus DSM 19965]
Length = 339
Score = 464 bits (1194), Expect = e-128, Method: Composition-based stats.
Identities = 142/356 (39%), Positives = 211/356 (59%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++ F+++LP S IA PV PRDS +LMV+ +S H+ +D+ + ND IV
Sbjct: 1 MKLENFNYELPESLIAQEPVEPRDSCKLMVLDKETG---HLSHHVFTDILDEIKENDLIV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+LNG R + ++ L + W V P + G + F
Sbjct: 58 FNNTKVIPARLNGYR----KQTGGKVEVLLLTPKGNDEWEVLVNPGRKALIGQEIIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ V+DK + G + F G + + + VG +P+PPYI +K ++ +Y
Sbjct: 111 --SDKFYCVVLDKTDFGGRRVKFYYDG-DFDLLLDEVGEMPIPPYIHKK----LKNKEEY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFTS L++++ G ++ FVTLHVG GTF PV E+ +DH M
Sbjct: 164 QTVYAKYKGSAAAPTAGLHFTSELINKIKEKGAEICFVTLHVGLGTFRPVNEENIEDHEM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I TA A+N K G RI++VGTTS+R LE+A + G + + +TN++I PG
Sbjct: 224 HKEWYVISEQTADAINKAKKEGRRIIAVGTTSVRTLESA-GQSGKLKAGANWTNLYIYPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y ++ VD +++NFHLP+STLLM++++F G ++ Y+ A++ YRF+S+GD L
Sbjct: 283 YSWKIVDAIITNFHLPESTLLMMMASFVGTDKILNAYKEAVAKKYRFFSFGDAMFL 338
>gi|27363914|ref|NP_759442.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
vulnificus CMCP6]
gi|31076954|sp|Q8DEX9|QUEA_VIBVU RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|27360031|gb|AAO08969.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
vulnificus CMCP6]
Length = 350
Score = 463 bits (1193), Expect = e-128, Method: Composition-based stats.
Identities = 138/363 (38%), Positives = 210/363 (57%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ ++ N + D D+ + + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQSERTASRLLQLNGNTGA---VKDGSFKDVLELVQAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + + + R SK K G ++ +
Sbjct: 58 FNNTRVIPARMFGRKES-----GGKLEVLVERMLDEKRFLAHVRSSKSPKPGTLVFLGEE 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D + A ++ + + + + + + + +G +PLPPYI RP + D Y
Sbjct: 113 D---QYSAEMVARQDA--LFELHLKADKTILEVLEEIGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF + LL ++ + G + +VTLHVGAGTF PVKV++ +H M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDNQLLEQIKAKGAEFAYVTLHVGAGTFQPVKVDNILEHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDG----IINPWSGFTNIF 296
HSE + A+N+ K+RGGR+++VGTTS+R LE+A E + P+ G T IF
Sbjct: 226 HSEYAEVPQEVVDAINATKARGGRVIAVGTTSVRSLESAAQESLKNGTELMPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+++ VD L++NFHLP+STL+MLVSAF G + T YQHA+S+ YRF+SYGD +
Sbjct: 286 IFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYDHTMNAYQHAVSNQYRFFSYGDAMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 EKK 348
>gi|261252138|ref|ZP_05944711.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
orientalis CIP 102891]
gi|260935529|gb|EEX91518.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
orientalis CIP 102891]
Length = 350
Score = 463 bits (1193), Expect = e-128, Method: Composition-based stats.
Identities = 139/363 (38%), Positives = 204/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N + D +D+ + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQPERTASRLLQMDGNTG---ELVDGTFTDVLEQVQPGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + V S + R SK K G +
Sbjct: 58 FNNTRVIPARMFGRKES-----GGKLEVLVERVVDEKSILAHVRCSKSPKPGSTIFVGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D A ++ + + + + S + + +G +PLPPYI RP + D Y
Sbjct: 113 D---EFSAQMVARHDA--LFELKFNSEQNVLAVLEEIGHMPLPPYI--DRPDEDSDKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G + +VTLHVGAGTF PVKV+D +H M
Sbjct: 166 QTVYNEKPGAVAAPTAGLHFDEPLLEKIKAKGAEFAYVTLHVGAGTFQPVKVDDIHEHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + A+N+ K+RGGRI++VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAINATKARGGRIIAVGTTSVRSLESAAQDALKKGTELVPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY ++ VD L++NFHLP+STL+MLVSAF G + T Y+HA+ + YRF+SYGD+ +
Sbjct: 286 IFPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYDNTMNAYKHAVENKYRFFSYGDSMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 KKK 348
>gi|153838068|ref|ZP_01990735.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
parahaemolyticus AQ3810]
gi|149748535|gb|EDM59394.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
parahaemolyticus AQ3810]
Length = 350
Score = 463 bits (1193), Expect = e-128, Method: Composition-based stats.
Identities = 139/363 (38%), Positives = 206/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N + D +D+ + + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQPERTASRLLQMDGNTG---ELIDGTFTDVLNQVQAGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + S + R SK K G +
Sbjct: 58 FNNTRVIPARMFGRKES-----GGKLEVLVERMLDEKSILAHVRCSKSPKPGTTIIVGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D A ++ + + + + S + + +G +PLPPYI RP + D Y
Sbjct: 113 D---EYSAEMVARHDA--LFELKFNSDKTVLEILEEIGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G + +VTLHVGAGTF PVKV++ +DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDDVLLDKIKAKGAEFAYVTLHVGAGTFQPVKVDNINDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + A+N+ K+RGGRI++VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAINATKARGGRIIAVGTTSVRSLESAAQDALKKGTELVPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY ++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ + YRF+SYGD+ +
Sbjct: 286 IYPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYENTMNAYKHAVENKYRFFSYGDSMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 KKK 348
>gi|319744823|gb|EFV97162.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae ATCC 13813]
Length = 342
Score = 463 bits (1193), Expect = e-128, Method: Composition-based stats.
Identities = 151/357 (42%), Positives = 209/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L+V+ ++D + L DA+V
Sbjct: 1 MNTNDFDFYLPEELIAQTPLEKRDASKLLVIDHK---NKTMADSHFDHILDELKPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGEK----PDTHGHVELLLLKNTEGDQWEVLAKPAKRLRVGTKVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV + G ++ FS GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLIATVTKELEHGGRIVEFSYDGIFLE-VLESLGEMPLPPYIHEK----LEDRDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTKELLEKIETKGVKLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A LN+VK GGRI++VGTTS+R LET ++ +G + SG+TNIFI P
Sbjct: 225 HSEFYQLSKEAADTLNAVKESGGRIIAVGTTSIRTLETIGSKFNGELKADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ VD +NFHLPKSTL+MLVSAF G + + Y HA+ YRF+S+GD +
Sbjct: 285 GYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYNHAVEERYRFFSFGDAMFV 341
>gi|223044117|ref|ZP_03614156.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus capitis SK14]
gi|222442511|gb|EEE48617.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus capitis SK14]
Length = 341
Score = 463 bits (1192), Expect = e-128, Method: Composition-based stats.
Identities = 145/357 (40%), Positives = 209/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EFD+ LP S IA P+ RD +RL+V+ ++ D+ +LN D +V
Sbjct: 1 MNIEEFDYHLPESLIAQTPLKNRDQSRLLVLQRETGK---MTHLHFKDVIDYLNPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L F
Sbjct: 58 LNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNRLSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++ A I + G ++ GI L+ ++ +G +PLPPYI + D Y
Sbjct: 111 -GDGKIVAECIKELEQGGRIMRLHYDGI-LQERLDELGEMPLPPYIKERLD----DPDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ G+ + F+TLHVG GTF PV V++ DDH M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTDDLLNQIKQKGVNIAFITLHVGLGTFRPVSVDNIDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN K++G RI+SVGTTS R LET + SG+T+IFI PG
Sbjct: 225 HSEYYQMTQETADLLNQTKAKGKRIISVGTTSTRTLETIRRDHEQFVEKSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ ++A+D L++NFHLPKSTL+MLVSAF E Y A+ YRF+S+GD L+
Sbjct: 285 FEYKAIDGLITNFHLPKSTLVMLVSAFSTRENILNAYHKAVEMEYRFFSFGDAMLII 341
>gi|116252158|ref|YP_767996.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhizobium
leguminosarum bv. viciae 3841]
gi|166216743|sp|Q1MGM3|QUEA_RHIL3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|115256806|emb|CAK07896.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhizobium leguminosarum bv. viciae 3841]
Length = 361
Score = 463 bits (1192), Expect = e-128, Method: Composition-based stats.
Identities = 212/362 (58%), Positives = 255/362 (70%), Gaps = 6/362 (1%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRP PRDSARL+V+ PN +SDH V DL +FL + DA+V
Sbjct: 1 MRVDLFDFDLPDERIALRPAEPRDSARLLVIDPN--AENSLSDHRVGDLTSFLRAGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R +++S TLHMR SP+ W +A+P K IK+GD + F
Sbjct: 59 FNDTKVIPAQLEGIRHR-DGAGGQQVSATLHMRTSPSRWKAFAKPGKRIKQGDRISFGHS 117
Query: 121 DGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+ATV +K GE+ L+F +SG L+ I+ VG IPLPPYIA KRP D RD
Sbjct: 118 GESCFLGSLDATVEEKGEAGEVTLLFDLSGPALDEAIAAVGHIPLPPYIAAKRPEDERDR 177
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YA+ +G+VAAPTAGLHFT L L GI+ +FVTLHVGAGTF+PVK +DT D
Sbjct: 178 ADYQTIYAREEGAVAAPTAGLHFTPGLFEALDRAGIERHFVTLHVGAGTFLPVKADDTAD 237
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH E G++ A A LN+V+ RGGRIV VGTTSLRL+E+A E G I PW+G T IFI
Sbjct: 238 HKMHLESGYVSAEIAARLNAVRERGGRIVCVGTTSLRLIESAAEESGEIMPWAGATGIFI 297
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRF+AVD+LM+NFHLP+STL MLVSAF G E Y+HAIS YRFYSYGD SLLF
Sbjct: 298 TPGYRFKAVDMLMTNFHLPRSTLFMLVSAFAGFETMHAAYKHAISTGYRFYSYGDASLLF 357
Query: 358 QK 359
+K
Sbjct: 358 RK 359
>gi|167755988|ref|ZP_02428115.1| hypothetical protein CLORAM_01508 [Clostridium ramosum DSM 1402]
gi|237733303|ref|ZP_04563784.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Mollicutes
bacterium D7]
gi|167703980|gb|EDS18559.1| hypothetical protein CLORAM_01508 [Clostridium ramosum DSM 1402]
gi|229383684|gb|EEO33775.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Coprobacillus sp. D7]
Length = 350
Score = 463 bits (1192), Expect = e-128, Method: Composition-based stats.
Identities = 146/357 (40%), Positives = 198/357 (55%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EFDF+LP IA P+ RD++RLMV++ N I D+ +L D +V
Sbjct: 10 MKISEFDFNLPEELIAQTPLDKRDTSRLMVLNRN---QQTIEHKHFYDIIDYLKPGDILV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L G++ + L + W ++++K I+ F
Sbjct: 67 RNNTKVIPARLFGIK----EETNGHVEVLLLKDQGNDMWECLVGNARIVKIDTIITF--- 119
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A ++ G + GI + +GT+PLPPYI K D Y
Sbjct: 120 -GDGLLKAQCVEIKEEGIRVFKMIYEGI-FYEILDQLGTMPLPPYIKEKLD----DQNRY 173
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAKI+GS AAPTAGLHFT ++ ++ + GI++ VTLHVG GTF PVKV+D +H M
Sbjct: 174 QTVYAKIEGSAAAPTAGLHFTDEIIEKIKAKGIEILDVTLHVGLGTFRPVKVDDVLEHHM 233
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I+ A LN K G RI++VGTTS R LE + G T+IFI PG
Sbjct: 234 HSEYYMIEPDVADKLNQAKQNGQRIIAVGTTSTRTLEANMKKYGKFTSVHENTDIFIYPG 293
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y++ A+D L++NFHLPKSTLLML+SAF E K YQ AI YRF+S+GD+ +
Sbjct: 294 YKYEAIDCLITNFHLPKSTLLMLISAFASKEFIFKAYQEAIDEKYRFFSFGDSMFIM 350
>gi|308174473|ref|YP_003921178.1| S-adenosylmethionine tRNA ribosyltransferase-isomerase [Bacillus
amyloliquefaciens DSM 7]
gi|307607337|emb|CBI43708.1| S-adenosylmethionine tRNA ribosyltransferase-isomerase [Bacillus
amyloliquefaciens DSM 7]
gi|328554393|gb|AEB24885.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
amyloliquefaciens TA208]
gi|328912798|gb|AEB64394.1| S-adenosylmethionine tRNA ribosyltransferase-isomerase [Bacillus
amyloliquefaciens LL3]
Length = 342
Score = 463 bits (1192), Expect = e-128, Method: Composition-based stats.
Identities = 147/358 (41%), Positives = 208/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP IA P+ RD++RLMV+ ++D ++ +F D +V
Sbjct: 1 MKVDLFDFELPERLIAQVPLKERDASRLMVLDKQTGG---LTDSSFKEIVSFFKEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + ++ L + ++W +P+K ++KG IL F
Sbjct: 58 LNNTRVLPARLFGTK----EDTGAKVELLLLKQEENDTWETLVKPAKRVRKGTILTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A ++ + G + F GI + +G +PLPPYI + D Y
Sbjct: 111 -GDGRLTAVCTEELDHGGRKIKFRYDGI-FYEVLESLGEMPLPPYIKEQLD----DKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT ++K GS AAPTAGLHFT +L L G+++ F+TLHVG GTF PV +D ++H M
Sbjct: 165 QTVFSKEIGSAAAPTAGLHFTEEILDELKQKGVRIEFITLHVGLGTFRPVSADDVEEHNM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
H+E + TA +LN V+ GGRIVSVGTTS R LET E DG+ SG+T+IFI P
Sbjct: 225 HAEFYEMTEETAASLNEVRKAGGRIVSVGTTSTRTLETIAGEHDGVFTASSGWTSIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY F+A+D +++NFHLPKS+L+MLVSA G E Y+HA+ YRF+S+GD L+
Sbjct: 285 GYEFKAIDGMITNFHLPKSSLIMLVSALAGREHVLSAYRHAVEEEYRFFSFGDAMLII 342
>gi|314933804|ref|ZP_07841169.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus caprae C87]
gi|313653954|gb|EFS17711.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus caprae C87]
Length = 341
Score = 463 bits (1192), Expect = e-128, Method: Composition-based stats.
Identities = 145/357 (40%), Positives = 208/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EFD+ LP S IA P+ RD +RL+V+ ++ D+ +LN D +V
Sbjct: 1 MNIEEFDYHLPESLIAQTPLKNRDQSRLLVLQRETGK---MTHLHFKDVIDYLNPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L F
Sbjct: 58 LNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNRLSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++ A I + G ++ GI L+ ++ +G +PLPPYI + D Y
Sbjct: 111 -GDGKIVAECIKELEQGGRIMRLHYDGI-LQERLDELGEMPLPPYIKERLD----DPDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ G+ + F+TLHVG GTF PV V++ DDH M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTDDLLNQIKQKGVNIAFITLHVGLGTFRPVSVDNIDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN K++G RI+SVGTTS R LET SG+T+IFI PG
Sbjct: 225 HSEYYQMTQETADLLNQTKAKGKRIISVGTTSTRTLETIRRGHEQFVEKSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ ++A+D L++NFHLPKSTL+MLVSAF E Y A+ YRF+S+GD L+
Sbjct: 285 FEYKAIDGLITNFHLPKSTLVMLVSAFSTRENILNAYHKAVEMEYRFFSFGDAMLII 341
>gi|260776672|ref|ZP_05885567.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
coralliilyticus ATCC BAA-450]
gi|260607895|gb|EEX34160.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
coralliilyticus ATCC BAA-450]
Length = 350
Score = 463 bits (1192), Expect = e-128, Method: Composition-based stats.
Identities = 137/363 (37%), Positives = 204/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N +SD +D+ + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQPERTASRLLQLDGNSG---ELSDGTFTDVLEQVQPGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + S + R SK K G +
Sbjct: 58 FNNTRVIPARMFGRKES-----GGKLEVLVERVLDEKSILAHVRCSKSPKPGSTILIGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D A ++ + + + + + + + +G +PLPPYI RP + D Y
Sbjct: 113 D---EYSAQMVARHDA--LFELKFNAEKNVLAVLEEIGHMPLPPYI--DRPDEDSDKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G + +VTLHVGAGTF PVKVE+ +DH M
Sbjct: 166 QTVYNEKPGAVAAPTAGLHFDEALLEKIKAKGAEFAYVTLHVGAGTFQPVKVENINDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI----INPWSGFTNIF 296
H+E + A+N+ K+R R+++VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAINAAKARNSRVIAVGTTSVRSLESAAQDALKKGTALAPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY ++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ + YRF+SYGD+ +
Sbjct: 286 IYPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYENTMNAYKHAVENKYRFFSYGDSMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 KKK 348
>gi|28897361|ref|NP_796966.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
parahaemolyticus RIMD 2210633]
gi|260364494|ref|ZP_05777115.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
parahaemolyticus K5030]
gi|260876322|ref|ZP_05888677.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
parahaemolyticus AN-5034]
gi|260898593|ref|ZP_05907089.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
parahaemolyticus Peru-466]
gi|31076904|sp|Q87S37|QUEA_VIBPA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|28805573|dbj|BAC58850.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
parahaemolyticus RIMD 2210633]
gi|308086874|gb|EFO36569.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
parahaemolyticus Peru-466]
gi|308093026|gb|EFO42721.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
parahaemolyticus AN-5034]
gi|308114696|gb|EFO52236.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
parahaemolyticus K5030]
Length = 350
Score = 463 bits (1192), Expect = e-128, Method: Composition-based stats.
Identities = 139/363 (38%), Positives = 206/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N + D +D+ + + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQPERTASRLLQMDGNTG---ELIDGTFTDVLNQVQAGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + S + R SK K G +
Sbjct: 58 FNNTRVIPARMFGRKES-----GGKLEVLVERMLDEKSILAHVRCSKSPKPGTTIIVGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D A ++ + + + + S + + +G +PLPPYI RP + D Y
Sbjct: 113 D---EYSAEMVARHDA--LFELKFNSDKTVLDILEEIGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G + +VTLHVGAGTF PVKV++ +DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDDVLLDKIKAKGAEFAYVTLHVGAGTFQPVKVDNINDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + A+N+ K+RGGRI++VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAINATKARGGRIIAVGTTSVRSLESAAQDALKKGTELVPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY ++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ + YRF+SYGD+ +
Sbjct: 286 IYPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYENTMNAYKHAVENKYRFFSYGDSMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 KKK 348
>gi|295105586|emb|CBL03130.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Faecalibacterium prausnitzii SL3/3]
Length = 342
Score = 463 bits (1191), Expect = e-128, Method: Composition-based stats.
Identities = 144/356 (40%), Positives = 200/356 (56%), Gaps = 15/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+ K+F +DLP IA P PRD+ARLMV+ I + DLP FL D +V
Sbjct: 1 MLKKDFWYDLPKELIAQEPASPRDAARLMVL---SQKDDSIQHKVFRDLPEFLEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN+KV+ A++ GV+ L +V + W A+P K ++ G + F
Sbjct: 58 VNNSKVLPARIVGVK----QPTGAVCELLLLRQVKGDQWECLAKPGKRMQPGTKVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L A V + G + F L ++ G +PLPPYI ++ D Y
Sbjct: 111 -GDGSLTAVVDETMEDGNKYVTFYYDTETLYEKLDEFGKMPLPPYITKQ----LEDQSQY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT L+ + ++G+ + VTLHVG GTF PV+ ++ DH M
Sbjct: 166 QTVYAKELGSAAAPTAGLHFTPELMDTIRAMGVGIAEVTLHVGLGTFRPVQEDEISDHKM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I TA+ + K+ G R+++VGTTS R LE A + G I SG T+IF+ PG
Sbjct: 226 HSEWYSISEETARRIRETKAAGHRVIAVGTTSCRTLEAAAAKYGEIKACSGNTSIFLYPG 285
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+F +D L++NFHLP+STL+MLVSA G E+T Y+ A++ YRF+S+GD L+
Sbjct: 286 VKFNCIDGLITNFHLPESTLIMLVSALYGYEKTMHAYEVAVAEKYRFFSFGDAMLI 341
>gi|15903316|ref|NP_358866.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae R6]
gi|307068069|ref|YP_003877035.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase
[Streptococcus pneumoniae AP200]
gi|15458913|gb|AAL00077.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae R6]
gi|306409606|gb|ADM85033.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase (queuine
synthetase) [Streptococcus pneumoniae AP200]
Length = 346
Score = 463 bits (1191), Expect = e-128, Method: Composition-based stats.
Identities = 149/358 (41%), Positives = 205/358 (57%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 5 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETG---EMQDKHFHSIIDMLEPGDALV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 62 MNDTRVLPARLYGQKV----ETGSHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F I LE + +G +PLPPYI K D Y
Sbjct: 115 -GDGRLSAVVTEELTHGGRIVRFEYQRIFLE-VLESLGEMPLPPYIHEKLD----DRERY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 169 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 229 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y H+I YRF+S+GD ++
Sbjct: 289 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHSIQEHYRFFSFGDAMFIY 346
>gi|24374633|ref|NP_718676.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
oneidensis MR-1]
gi|46577064|sp|Q8ECM2|QUEA_SHEON RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|24349260|gb|AAN56120.1|AE015748_8 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
oneidensis MR-1]
Length = 345
Score = 463 bits (1191), Expect = e-128, Method: Composition-based stats.
Identities = 141/360 (39%), Positives = 203/360 (56%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R+++RL+ + N + D +DL +N D +V
Sbjct: 1 MRVTDFSFDLPDELIARYPMAQRNASRLLTLDGNTGT---LVDKQFTDLLGMINPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK K I+H
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERMLDDKRILAHVRSSKSPKVDSIIHL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
E ++ + + + + +S + + + VG +PLPPYI RP + D Y
Sbjct: 110 --DGGYEMKMMARHDA--LFELQLLSELSILEVLEAVGHMPLPPYI--DRPDEDADKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF +L L + G+ + FVTLHVGAGTF PV+V++ +H M
Sbjct: 164 QTVYNQNPGAVAAPTAGLHFDDAMLEALKAKGVNIAFVTLHVGAGTFQPVRVDNVLEHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFITP 299
HSE + + K+ G R+V+VGTTS+R LE+A G +N +SG T+IFI P
Sbjct: 224 HSEWANVPQDVVDLIARTKAAGNRVVAVGTTSVRSLESAARASAGQLNAFSGDTDIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY+F+ VD +++NFHLP+STL+MLVSAF G E YQHAI YRF+SYGD + +K
Sbjct: 284 GYQFQVVDAMVTNFHLPESTLIMLVSAFAGYEHVMAAYQHAIKQKYRFFSYGDAMFVTKK 343
>gi|268611591|ref|ZP_06145318.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Ruminococcus flavefaciens FD-1]
Length = 343
Score = 463 bits (1191), Expect = e-128, Method: Composition-based stats.
Identities = 143/354 (40%), Positives = 195/354 (55%), Gaps = 16/354 (4%)
Query: 4 KEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNN 63
+F +DLP IA PV PR+++R+M V IS +L L D +V N+
Sbjct: 6 SDFYYDLPEELIAQHPVEPRNASRMMCVDRRTG---EISHDHFYNLCDHLREGDLLVMND 62
Query: 64 TKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQ 123
++VI A+L G + + I L + W + RP K K G F G
Sbjct: 63 SRVIPARLYGEKV----GNQTFIEFLLLEQKGDKLWEIICRPGKKAKVGTKFSF----GG 114
Query: 124 SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTT 183
RL A V++ + G ++ F G + VG +PLPPYI K YQT
Sbjct: 115 GRLVAEVVEVKDDGNRIVKFECEGNFF-TALEDVGQMPLPPYIKEKLEN----KERYQTV 169
Query: 184 YAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSE 243
Y++ GS AAPTAGLHFT +L L S GIK FVTLHVG GTF PVK ++ DH MHSE
Sbjct: 170 YSRELGSAAAPTAGLHFTPEMLDDLRSRGIKTAFVTLHVGLGTFRPVKEDNVLDHKMHSE 229
Query: 244 IGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRF 303
+ TA +N K+ GGR+++VGTT+ R LE+ T G I+ G+T+IFI P Y F
Sbjct: 230 HYHLPQETADLINETKANGGRVIAVGTTTCRTLESVATFYGDISEHDGYTDIFIYPSYEF 289
Query: 304 RAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+S+GD+ +
Sbjct: 290 KCIDGLITNFHLPESTLIMLVSAFMGYDNTMNAYKTAVEEKYRFFSFGDSMCIL 343
>gi|77408883|ref|ZP_00785609.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae COH1]
gi|77172522|gb|EAO75665.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus agalactiae COH1]
Length = 342
Score = 463 bits (1191), Expect = e-128, Method: Composition-based stats.
Identities = 152/357 (42%), Positives = 210/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L+V+ ++D + L DA+V
Sbjct: 1 MNTNDFDFYLPEELIAQTPLEKRDASKLLVIDHK---NKTMTDSHFDHILDELKPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K ++ G+ + F
Sbjct: 58 MNNTRVLPARLYGEK----PDTHGHVELLLLKNTEGDQWEVLAKPAKRLRVGNRVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV + G ++ FS GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLIATVTKELEHGGRIVEFSYDGIFLE-VLESLGEMPLPPYIHEK----LEDRDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTKELLEKIETKGVKLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A LN+VK GGRIV+VGTTS+R LET ++ +G + SG+TNIFI P
Sbjct: 225 HSEFYQLSKEAADTLNAVKESGGRIVAVGTTSIRTLETIGSKFNGELKADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ VD +NFHLPKSTL+MLVSAF G + + Y HA+ YRF+S+GD +
Sbjct: 285 GYQFKVVDAFSTNFHLPKSTLVMLVSAFAGHDFVLEAYNHAVEERYRFFSFGDAMFV 341
>gi|168483957|ref|ZP_02708909.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae CDC1873-00]
gi|172042767|gb|EDT50813.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae CDC1873-00]
Length = 342
Score = 463 bits (1191), Expect = e-128, Method: Composition-based stats.
Identities = 150/358 (41%), Positives = 205/358 (57%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 1 MNTADFDFHLPEGLIAQTPLEKRDASKLLIVNRETG---EMQDKHFHSIIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGSHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F I LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQRIFLE-VLESLGEMPLPPYIHEKLD----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFGDAMFIY 342
>gi|169350857|ref|ZP_02867795.1| hypothetical protein CLOSPI_01631 [Clostridium spiroforme DSM 1552]
gi|169292443|gb|EDS74576.1| hypothetical protein CLOSPI_01631 [Clostridium spiroforme DSM 1552]
Length = 349
Score = 463 bits (1191), Expect = e-128, Method: Composition-based stats.
Identities = 143/357 (40%), Positives = 201/357 (56%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EFDF+LP IA P+ RD++RLMV++ I D+ +L D +V
Sbjct: 9 MKLSEFDFELPEELIAQTPLDKRDTSRLMVLNRENQT---IEHKHFYDIINYLKPGDVLV 65
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L GV+ + L + W ++++K I+ F
Sbjct: 66 RNNTKVIPARLFGVK----EETNGHVEVLLLKDQGNDVWECLVGNARIVKLDTIITF--- 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A ++ + G + GI + +GT+PLPPYI K D Y
Sbjct: 119 -GDGLLKAKCLEIKDEGIRVFKMIYDGI-FYEILDQLGTMPLPPYIKEK----LNDQSRY 172
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAKI+GS AAPTAGLHFT +++ ++ + GI++ +TLHVG GTF PVKV++ +H M
Sbjct: 173 QTVYAKIEGSAAAPTAGLHFTDDIIRKIKAKGIEILDITLHVGLGTFRPVKVDNVLEHHM 232
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I+ A LN K+ G RI++VGTTS R LE + G T+IFI PG
Sbjct: 233 HSEYYMIEPEVADKLNQAKANGQRIIAVGTTSTRTLEANMQKYGKFTATHENTDIFIYPG 292
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+++A+D L++NFHLPKSTLLML+SAF E K Y AI + YRF+S+GD+ +
Sbjct: 293 YQYQAIDCLITNFHLPKSTLLMLISAFATKEFIFKAYHEAIENKYRFFSFGDSMFIM 349
>gi|126654017|ref|ZP_01725850.1| hypothetical protein BB14905_09820 [Bacillus sp. B14905]
gi|126589491|gb|EAZ83635.1| hypothetical protein BB14905_09820 [Bacillus sp. B14905]
Length = 346
Score = 463 bits (1191), Expect = e-128, Method: Composition-based stats.
Identities = 144/362 (39%), Positives = 204/362 (56%), Gaps = 18/362 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDF+LP IA P+ R ++RLMVV P + + H + + L + D +V
Sbjct: 1 MRVEDFDFELPEELIAQTPLVDRTASRLMVVTPGS---IEVEHHHFAHVLDELRAGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP-NSWSVYARPSKVIKKGDILHFFS 119
N+T+V+ A+L GV+ I L +++ + W +P+K +K G ++ F
Sbjct: 58 LNDTRVLPARLMGVK----EETGAHIEVLLLKQLAGSDEWETLVKPAKRVKVGTVITF-- 111
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G L AT + + G F GI + +G +PLPPYI K D
Sbjct: 112 --GDGLLTATCTGELDHGGRTFEFHYDGI-FYEILEQLGEMPLPPYIREK----LEDKDR 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK +GS AAPTAGLHFT LL ++ + G++V F+TLHVG GTF PV V+ ++H
Sbjct: 165 YQTVYAKERGSAAAPTAGLHFTEELLEQVKAKGVEVVFITLHVGLGTFRPVSVDSIENHE 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MH+E + A +N VK GG++++VGTTS R LET ++ G + P G+T+IFI
Sbjct: 225 MHAEFYSVTDEAADTINRVKRNGGKVIAVGTTSTRTLETIGSKYGGEVRPEQGWTSIFIY 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY F VD L++NFHLPKSTL+MLVS E YQ A+ YRF+S+GD +
Sbjct: 285 PGYTFSVVDGLITNFHLPKSTLVMLVSTLATRETILSAYQQAVEEKYRFFSFGDAMFIRP 344
Query: 359 KR 360
K
Sbjct: 345 KE 346
>gi|116515685|ref|YP_816714.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae D39]
gi|148997530|ref|ZP_01825135.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP11-BS70]
gi|168575875|ref|ZP_02721790.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae MLV-016]
gi|46577049|sp|Q8DPA0|QUEA_STRR6 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|122278400|sp|Q04JT4|QUEA_STRP2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|116076261|gb|ABJ53981.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae D39]
gi|147756585|gb|EDK63626.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae SP11-BS70]
gi|183578232|gb|EDT98760.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae MLV-016]
Length = 342
Score = 463 bits (1191), Expect = e-128, Method: Composition-based stats.
Identities = 149/358 (41%), Positives = 205/358 (57%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETG---EMQDKHFHSIIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGSHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F I LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQRIFLE-VLESLGEMPLPPYIHEKLD----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L SVK GGR+++VGTTS+R LET ++ DG I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAAATLRSVKENGGRVIAVGTTSIRTLETIGSKFDGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY ++ VD +NFHLPKSTL+MLVSAF G E Y H+I YRF+S+GD ++
Sbjct: 285 GYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHSIQEHYRFFSFGDAMFIY 342
>gi|257126618|ref|YP_003164732.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Leptotrichia buccalis C-1013-b]
gi|257050557|gb|ACV39741.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Leptotrichia buccalis C-1013-b]
Length = 340
Score = 463 bits (1191), Expect = e-128, Method: Composition-based stats.
Identities = 141/357 (39%), Positives = 206/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF+LP IA V PRD ++L+V++ + + ++ +L +D +V
Sbjct: 1 MNISDFDFELPEELIAQHAVEPRDHSKLLVLNKDKKT---LEHKKFYNIIDYLKKDDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKVI A+L G + + + C L R +W V +P+K +K G L F
Sbjct: 58 INRTKVIPARLFGHKENGVV-----LECFLLKRYDLYTWEVLLKPAKKLKIGQKLIFS-- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L+A +++ G ++ F+ G E + +G +PLPPYI K D Y
Sbjct: 111 --DGILKAELLEIKEDGNRIIKFNFEG-RFEEILDKLGEMPLPPYIMEK----LEDKNRY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK SVAAPTAGLHFT+ LL ++ GI + V L VG GTF PV+VE+ DH M
Sbjct: 164 QTVYAKEGESVAAPTAGLHFTNELLEKIREKGITIAEVFLDVGLGTFRPVQVENVLDHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I TA+ +N K +G R+++VGTTS+R LE++ E+G + G TNIFI
Sbjct: 224 HSEKYRIPEETAKIINEAKKKGNRVIAVGTTSVRTLESSVDENGKLKASEGNTNIFIYGD 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ +D +++NFHLPKSTL+ML+SAF G E + Y+ A+ YRFYS+GD+ ++
Sbjct: 284 YKFKIIDAIITNFHLPKSTLIMLISAFGGKEFIFEAYKKAVEEKYRFYSFGDSMFIY 340
>gi|328472615|gb|EGF43478.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
parahaemolyticus 10329]
Length = 350
Score = 463 bits (1191), Expect = e-128, Method: Composition-based stats.
Identities = 139/363 (38%), Positives = 206/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N + D +D+ + + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQPERTASRLLQMDGNTG---ELIDGTFTDVLNQVQAGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + S + R SK K G +
Sbjct: 58 FNNTRVIPARMFGRKES-----GGKLEVLVERMLDEKSILAHVRCSKSPKPGTTIIVGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D A ++ + + + + S + + +G +PLPPYI RP + D Y
Sbjct: 113 D---EYSADMVARHDA--LFELKFNSDKTVLEILEEIGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G + +VTLHVGAGTF PVKV++ +DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDDVLLDKIKAKGAEFAYVTLHVGAGTFQPVKVDNINDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + A+N+ K+RGGRI++VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAINATKARGGRIIAVGTTSVRSLESAAQDALKKGTELVPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY ++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ + YRF+SYGD+ +
Sbjct: 286 IYPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYENTMNAYKHAVENKYRFFSYGDSMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 KKK 348
>gi|160945180|ref|ZP_02092406.1| hypothetical protein FAEPRAM212_02699 [Faecalibacterium prausnitzii
M21/2]
gi|158442911|gb|EDP19916.1| hypothetical protein FAEPRAM212_02699 [Faecalibacterium prausnitzii
M21/2]
Length = 345
Score = 463 bits (1191), Expect = e-128, Method: Composition-based stats.
Identities = 144/356 (40%), Positives = 200/356 (56%), Gaps = 15/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+ K+F +DLP IA P PRD+ARLMV+ I + DLP FL D +V
Sbjct: 4 MLKKDFWYDLPKELIAQEPASPRDAARLMVL---SQKDDSIQHKVFRDLPEFLEPGDLLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN+KV+ A++ GV+ L +V + W A+P K ++ G + F
Sbjct: 61 VNNSKVLPARIVGVK----QPTGAVCELLLLRQVKGDQWECLAKPGKRMQPGTKVSF--- 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L A V + G + F L ++ G +PLPPYI ++ D Y
Sbjct: 114 -GDGSLTAVVDETMEDGNKYVTFYYDTETLYEKLDEFGKMPLPPYITKQ----LEDQSQY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT L+ + ++G+ + VTLHVG GTF PV+ ++ DH M
Sbjct: 169 QTVYAKELGSAAAPTAGLHFTPELMDTIRAMGVGIAEVTLHVGLGTFRPVQEDEISDHKM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I TA+ + K+ G R+++VGTTS R LE A + G I SG T+IF+ PG
Sbjct: 229 HSEWYSISEETARRIRETKAAGHRVIAVGTTSCRTLEAAAAKYGEIKACSGNTSIFLYPG 288
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+F +D L++NFHLP+STL+MLVSA G E+T Y+ A++ YRF+S+GD L+
Sbjct: 289 VKFNCIDGLITNFHLPESTLIMLVSALYGYEKTMHAYEVAVAEKYRFFSFGDAMLI 344
>gi|163790793|ref|ZP_02185219.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Carnobacterium sp. AT7]
gi|159873973|gb|EDP68051.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Carnobacterium sp. AT7]
Length = 343
Score = 462 bits (1190), Expect = e-128, Method: Composition-based stats.
Identities = 150/357 (42%), Positives = 214/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ K+FDFDLP IA P+ R S++L+++ + D +D+ L+ DA+V
Sbjct: 2 LTTKDFDFDLPEELIAQTPLENRSSSKLLILDKETGK---VEDKHFTDILDELHEGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G++ I L + W +P+K G+++ F
Sbjct: 59 MNDTRVLPARLHGIK----TETGAHIEILLLKNTENDRWETLVKPAKKATVGNVISF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV ++ G ++ FS GI LE + +G +PLPPYI + D Y
Sbjct: 112 -GDGRLTATVKEELTHGGRIIDFSYEGIFLE-VLESLGEMPLPPYIKER----LEDSERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+++ F+TLHVG GTF PV V+ +DH M
Sbjct: 166 QTVYAKENGSAAAPTAGLHFTQELLEQIKAKGVQLVFLTLHVGLGTFRPVSVDSIEDHEM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + +A AL +V+ GG+IV+VGTTS+R LET T+ +G + SG+T+IFI+P
Sbjct: 226 HSEFYRLTEESAAALTAVQKNGGKIVAVGTTSIRTLETIGTKFNGELKADSGWTDIFISP 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ VD +NFHLPKSTL+MLVSAF G E YQHA+ YRF+S+GD +
Sbjct: 286 GYKFKVVDAFSTNFHLPKSTLVMLVSAFAGREHVLAAYQHAVDEKYRFFSFGDAMFV 342
>gi|289450513|ref|YP_003475177.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Clostridiales genomosp. BVAB3 str. UPII9-5]
gi|289185060|gb|ADC91485.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Clostridiales genomosp. BVAB3 str. UPII9-5]
Length = 349
Score = 462 bits (1190), Expect = e-128, Method: Composition-based stats.
Identities = 143/356 (40%), Positives = 208/356 (58%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F ++LP IA P RD++RLM+V+P I S++ ++++ D +V
Sbjct: 1 MKTSDFYYELPKELIAQHPTAKRDNSRLMLVNPATQS---IGHTHFSEIINYIDAGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L GV+ + L R + + W V RP + +++G ++ F
Sbjct: 58 LNNTKVIPARLLGVK----RDTGVHVEFLLLNRRADDEWEVIVRPGRRLRQGSVVDFMPG 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ L A + + TG ++ F +GI E + GT+PLPPYI K D Y
Sbjct: 114 E----LSAEITEVLPTGNRVVKFFFNGI-WEEILDKAGTMPLPPYIKEKLA----DPSRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
T YAK GS AAPTAGLHFT LL+ L + G+K+ +VTLHVG GTF PVK E+ +H M
Sbjct: 165 NTVYAKYDGSAAAPTAGLHFTPELLAALQAKGVKLAYVTLHVGLGTFRPVKAENIAEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TAQ +N VK+ G +I++VGTTS R +E+ +G + P +G+T+IFI PG
Sbjct: 225 HSEYYELPPETAQLINEVKASGHKIIAVGTTSTRTVESVYHNNGKVVPETGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
++F +D L++NFHLP+STL+MLVSA G + Y A+ YRF+S+GD +
Sbjct: 285 FKFGVIDGLITNFHLPESTLMMLVSAIAGKDFIFSAYAEAVKEKYRFFSFGDAMFI 340
>gi|311069257|ref|YP_003974180.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
atrophaeus 1942]
gi|310869774|gb|ADP33249.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
atrophaeus 1942]
Length = 342
Score = 462 bits (1190), Expect = e-128, Method: Composition-based stats.
Identities = 148/358 (41%), Positives = 210/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V+ FDF+LP IA P+ RD++RLMV+ + +SD ++ +F D +V
Sbjct: 1 MKVELFDFELPERLIAQVPLEQRDASRLMVLDKHTGG---LSDSSFKEIVSFFKEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L GV+ ++ L + + + W +P+K +KKG +L F
Sbjct: 58 LNNTRVLPARLFGVK----EDTGAKVELLLLKQETGDRWETLVKPAKRVKKGTVLTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A ++ G + F GI + +G +PLPPYI + D Y
Sbjct: 111 -GDGLLQAVCTEELEHGGRKVEFRYDGI-FYEVLESLGEMPLPPYIKEQLD----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT ++K GS AAPTAGLHFT +L L G+++ F+TLHVG GTF PV ++ ++H M
Sbjct: 165 QTVFSKEIGSAAAPTAGLHFTEEILGELKEKGVRIEFITLHVGLGTFRPVSADEVEEHNM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
H+E + A TA ALN V+ GGRIVSVGTTS R LET E +G SG+T+IFI P
Sbjct: 225 HAEFYEMSAETAAALNHVRETGGRIVSVGTTSTRTLETIAGENNGSFKASSGWTSIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY F+A+D +++NFHLPKS+L+MLVSA G E + Y HA+ YRF+S+GD L+
Sbjct: 285 GYEFKAIDGMITNFHLPKSSLIMLVSALAGREHVLRAYNHAVEKEYRFFSFGDAMLII 342
>gi|254719159|ref|ZP_05180970.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
sp. 83/13]
gi|265984153|ref|ZP_06096888.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
sp. 83/13]
gi|306838150|ref|ZP_07471006.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
sp. NF 2653]
gi|264662745|gb|EEZ33006.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
sp. 83/13]
gi|306406740|gb|EFM62963.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
sp. NF 2653]
Length = 363
Score = 462 bits (1190), Expect = e-128, Method: Composition-based stats.
Identities = 210/361 (58%), Positives = 256/361 (70%), Gaps = 9/361 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRPV PRD A+L+ V P D V DLP L DA+V
Sbjct: 1 MRVDLFDFDLPEERIALRPVEPRDHAKLLHVRPG----QPFEDRHVYDLPDLLQPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R N + +S TLHMRV P+ W + RP+K +K+GD + F
Sbjct: 57 FNDTKVIPAQLEGMRERTGNISQ--VSATLHMRVGPDRWKAFLRPAKRVKEGDRIRFGHS 114
Query: 121 DGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+ATV +K + GE LLVF +SG L+ I+ VG IPLPPYIA KRP D RD
Sbjct: 115 GTSCFLGTLDATVAEKGDAGEALLVFDLSGAVLDEAIAAVGHIPLPPYIASKRPEDERDR 174
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YA+ +G+VAAPTAGLHFT +LL ++ + GI+ +FVTLHVGAGTF+PVK +DT D
Sbjct: 175 KDYQTVYAREEGAVAAPTAGLHFTPDLLEKIKARGIEEHFVTLHVGAGTFLPVKADDTGD 234
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+EIG + TA ALN+V RGGRI+ VGTTSLRL+E+AT EDGI+ PWSG T+IFI
Sbjct: 235 HKMHAEIGHVSQRTASALNAVHERGGRIICVGTTSLRLIESATGEDGIVRPWSGATDIFI 294
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFRAVD+LM+NFHLP+STL MLVSAF G++ Y +AI+ YRFYSYGD SLL
Sbjct: 295 TPGYRFRAVDLLMTNFHLPRSTLFMLVSAFSGLDTMHAAYNYAIADGYRFYSYGDASLLE 354
Query: 358 Q 358
+
Sbjct: 355 R 355
>gi|323499868|ref|ZP_08104827.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
sinaloensis DSM 21326]
gi|323315109|gb|EGA68161.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
sinaloensis DSM 21326]
Length = 350
Score = 462 bits (1190), Expect = e-128, Method: Composition-based stats.
Identities = 136/363 (37%), Positives = 204/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N + D +D+ + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQPERTASRLLQMDGNTG---ELVDGTFTDVLDQVQPGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + S + R SK K G +
Sbjct: 58 FNNTRVIPARMFGRKES-----GGKLEVLVERVLDEKSILAHVRCSKSPKPGSTIFIGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D A ++ + + + + + + + +G +PLPPYI RP + D Y
Sbjct: 113 D---EYSAEMVARHDA--LFELKFNAEQNVLAVLEEIGHMPLPPYI--DRPDEDSDKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G + +VTLHVGAGTF PVKV++ ++H M
Sbjct: 166 QTVYNEKPGAVAAPTAGLHFDEPLLEKIKAKGAEFAYVTLHVGAGTFQPVKVDNINEHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + A+ + K+RGGRI++VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAIQATKARGGRIIAVGTTSVRSLESAAQDAIKKGTELVPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY ++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ + YRF+SYGD+ +
Sbjct: 286 IFPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYENTMNAYKHAVENKYRFFSYGDSMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 KKK 348
>gi|323142292|ref|ZP_08077124.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Phascolarctobacterium sp. YIT 12067]
gi|322413176|gb|EFY04063.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Phascolarctobacterium sp. YIT 12067]
Length = 342
Score = 462 bits (1189), Expect = e-128, Method: Composition-based stats.
Identities = 146/357 (40%), Positives = 197/357 (55%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +FD+DLP IA P+ PRD +RL+VV I DL +L D +V
Sbjct: 1 MLVTDFDYDLPQELIAQHPMEPRDHSRLLVVDKKTG---EIEHKHFYDLVNYLKPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L+G + + L R W V RP K ++ G ++F +
Sbjct: 58 FNDTRVIPARLHGTK-----DTGAHVEVFLLTRRDATDWEVLVRPGKKLQVGAKINFSDE 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L VI+ + G ++ F GI E + +G PLPPYI D Y
Sbjct: 113 -----LSCEVIEHTDFGGRVVRFKYDGI-FEEILDRLGETPLPPYITAP----LEDKERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + +GS AAPTAGLHFT LL ++ IG + FVTLHVG GTF PV +DH M
Sbjct: 163 QTVYNRERGSAAAPTAGLHFTKELLQKIKEIGCEEVFVTLHVGLGTFRPVSEAKIEDHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A A+N K+ G RI++VGTT++R LE A DG ++ S +TNIFI PG
Sbjct: 223 HKEFYTVSQEAADAVNKAKAEGRRIIAVGTTAVRTLEAAGA-DGQLHAGSSWTNIFIYPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+FR VD L++NFHLP+STLLMLVS E + Y+ A+ YRF+S+GD +
Sbjct: 282 YKFRLVDDLVTNFHLPQSTLLMLVSTLSTREIMLQTYKKAVEEKYRFFSFGDAMFIT 338
>gi|91225158|ref|ZP_01260380.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
alginolyticus 12G01]
gi|269965152|ref|ZP_06179286.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase [Vibrio
alginolyticus 40B]
gi|91190101|gb|EAS76372.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
alginolyticus 12G01]
gi|269830138|gb|EEZ84365.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase [Vibrio
alginolyticus 40B]
Length = 350
Score = 462 bits (1189), Expect = e-128, Method: Composition-based stats.
Identities = 140/363 (38%), Positives = 205/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N + D +D+ + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQPERTASRLLQMDGNTG---ELIDGTFTDVLGQVQPGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + S + R SK K G +
Sbjct: 58 FNNTRVIPARLFGRKES-----GGKLEVLVERMLDEKSILAHVRCSKSPKPGTTIIVGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D A ++ + + + + S + + +G +PLPPYI RP + D Y
Sbjct: 113 D---EYSAEMVARHDA--LFELKFSSDKTVLEILEEIGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G + +VTLHVGAGTF PVKVE+ +DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDDVLLEKIKAKGAEFAYVTLHVGAGTFQPVKVENINDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT----TEDGIINPWSGFTNIF 296
H+E + +A+ + K+RGGRI++VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVEAIKATKARGGRIIAVGTTSVRSLESAAQDALQKGTELAPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY ++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ + YRF+SYGD+ +
Sbjct: 286 IFPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYENTMNAYKHAVENKYRFFSYGDSMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 KKK 348
>gi|17987172|ref|NP_539806.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
melitensis bv. 1 str. 16M]
gi|23501970|ref|NP_698097.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
suis 1330]
gi|62290007|ref|YP_221800.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 1 str. 9-941]
gi|82699935|ref|YP_414509.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
melitensis biovar Abortus 2308]
gi|148560477|ref|YP_001259016.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ovis ATCC 25840]
gi|161619043|ref|YP_001592930.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
canis ATCC 23365]
gi|163843359|ref|YP_001627763.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
suis ATCC 23445]
gi|189024248|ref|YP_001935016.1| Queuosine biosynthesis protein [Brucella abortus S19]
gi|237815515|ref|ZP_04594512.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus str. 2308 A]
gi|254689322|ref|ZP_05152576.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 6 str. 870]
gi|254697454|ref|ZP_05159282.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 2 str. 86/8/59]
gi|254701839|ref|ZP_05163667.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
suis bv. 5 str. 513]
gi|254704384|ref|ZP_05166212.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
suis bv. 3 str. 686]
gi|254706720|ref|ZP_05168548.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
pinnipedialis M163/99/10]
gi|254710173|ref|ZP_05171984.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
pinnipedialis B2/94]
gi|254714171|ref|ZP_05175982.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti M644/93/1]
gi|254717606|ref|ZP_05179417.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti M13/05/1]
gi|254730352|ref|ZP_05188930.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 4 str. 292]
gi|256031667|ref|ZP_05445281.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
pinnipedialis M292/94/1]
gi|256044752|ref|ZP_05447656.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
melitensis bv. 1 str. Rev.1]
gi|256061179|ref|ZP_05451331.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
neotomae 5K33]
gi|256113652|ref|ZP_05454463.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
melitensis bv. 3 str. Ether]
gi|256159818|ref|ZP_05457555.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti M490/95/1]
gi|256255069|ref|ZP_05460605.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti B1/94]
gi|256257569|ref|ZP_05463105.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 9 str. C68]
gi|256369519|ref|YP_003107029.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
microti CCM 4915]
gi|260546562|ref|ZP_05822301.1| queuosine biosynthesis protein [Brucella abortus NCTC 8038]
gi|260565646|ref|ZP_05836130.1| queuosine biosynthesis protein [Brucella melitensis bv. 1 str. 16M]
gi|260566370|ref|ZP_05836840.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
suis bv. 4 str. 40]
gi|260754835|ref|ZP_05867183.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 6 str. 870]
gi|260758052|ref|ZP_05870400.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 4 str. 292]
gi|260761877|ref|ZP_05874220.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 2 str. 86/8/59]
gi|260883847|ref|ZP_05895461.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 9 str. C68]
gi|261219439|ref|ZP_05933720.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti M13/05/1]
gi|261222259|ref|ZP_05936540.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti B1/94]
gi|261314184|ref|ZP_05953381.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
pinnipedialis M163/99/10]
gi|261317727|ref|ZP_05956924.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
pinnipedialis B2/94]
gi|261321935|ref|ZP_05961132.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti M644/93/1]
gi|261325182|ref|ZP_05964379.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
neotomae 5K33]
gi|261752398|ref|ZP_05996107.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
suis bv. 5 str. 513]
gi|261755058|ref|ZP_05998767.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
suis bv. 3 str. 686]
gi|265988758|ref|ZP_06101315.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
pinnipedialis M292/94/1]
gi|265991173|ref|ZP_06103730.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
melitensis bv. 1 str. Rev.1]
gi|265995009|ref|ZP_06107566.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
melitensis bv. 3 str. Ether]
gi|265998224|ref|ZP_06110781.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti M490/95/1]
gi|294852432|ref|ZP_06793105.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
sp. NVSL 07-0026]
gi|297248409|ref|ZP_06932127.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 5 str. B3196]
gi|54038975|sp|P65949|QUEA_BRUSU RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|54041779|sp|P65948|QUEA_BRUME RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|75496776|sp|Q57D45|QUEA_BRUAB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|91207414|sp|Q2YPY7|QUEA_BRUA2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|166216704|sp|A5VQL9|QUEA_BRUO2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|189038511|sp|A9M5A4|QUEA_BRUC2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|189038512|sp|B0CGP2|QUEA_BRUSI RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|238689369|sp|B2S5U5|QUEA_BRUA1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|17982839|gb|AAL52070.1| s-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
melitensis bv. 1 str. 16M]
gi|23347918|gb|AAN30012.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
suis 1330]
gi|62196139|gb|AAX74439.1| QueA, S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Brucella abortus bv. 1 str. 9-941]
gi|82616036|emb|CAJ11072.1| Queuosine biosynthesis protein [Brucella melitensis biovar Abortus
2308]
gi|148371734|gb|ABQ61713.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ovis ATCC 25840]
gi|161335854|gb|ABX62159.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
canis ATCC 23365]
gi|163674082|gb|ABY38193.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
suis ATCC 23445]
gi|189019820|gb|ACD72542.1| Queuosine biosynthesis protein [Brucella abortus S19]
gi|237788813|gb|EEP63024.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus str. 2308 A]
gi|255999681|gb|ACU48080.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
microti CCM 4915]
gi|260095612|gb|EEW79489.1| queuosine biosynthesis protein [Brucella abortus NCTC 8038]
gi|260151714|gb|EEW86808.1| queuosine biosynthesis protein [Brucella melitensis bv. 1 str. 16M]
gi|260155888|gb|EEW90968.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
suis bv. 4 str. 40]
gi|260668370|gb|EEX55310.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 4 str. 292]
gi|260672309|gb|EEX59130.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 2 str. 86/8/59]
gi|260674943|gb|EEX61764.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 6 str. 870]
gi|260873375|gb|EEX80444.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 9 str. C68]
gi|260920843|gb|EEX87496.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti B1/94]
gi|260924528|gb|EEX91096.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti M13/05/1]
gi|261294625|gb|EEX98121.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti M644/93/1]
gi|261296950|gb|EEY00447.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
pinnipedialis B2/94]
gi|261301162|gb|EEY04659.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
neotomae 5K33]
gi|261303210|gb|EEY06707.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
pinnipedialis M163/99/10]
gi|261742151|gb|EEY30077.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
suis bv. 5 str. 513]
gi|261744811|gb|EEY32737.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
suis bv. 3 str. 686]
gi|262552692|gb|EEZ08682.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti M490/95/1]
gi|262766122|gb|EEZ11911.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
melitensis bv. 3 str. Ether]
gi|263001957|gb|EEZ14532.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
melitensis bv. 1 str. Rev.1]
gi|264660955|gb|EEZ31216.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
pinnipedialis M292/94/1]
gi|294821021|gb|EFG38020.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
sp. NVSL 07-0026]
gi|297175578|gb|EFH34925.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 5 str. B3196]
Length = 363
Score = 462 bits (1189), Expect = e-128, Method: Composition-based stats.
Identities = 209/361 (57%), Positives = 257/361 (71%), Gaps = 9/361 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRPV PRD A+L+ V P D V DLP L DA+V
Sbjct: 1 MRVDLFDFDLPEERIALRPVEPRDHAKLLHVRPG----EPFEDRHVYDLPDLLQPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R N + +S TLHMRV P+ W + RP+K +K+GD + F
Sbjct: 57 FNDTKVIPAQLEGMRERTGNISQ--VSATLHMRVGPDRWKAFLRPAKRVKEGDRIRFGHS 114
Query: 121 DGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+ATV +K ++GE LLVF +SG L+ I+ VG IPLPPYIA KRP D RD
Sbjct: 115 GTSCFLGTLDATVAEKGDSGEALLVFDLSGAVLDEAIAAVGHIPLPPYIASKRPEDERDR 174
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YA+ +G+VAAPTAGLHFT +LL ++ + GI+ +FVTLHVGAGTF+PVK +DT D
Sbjct: 175 KDYQTVYAREEGAVAAPTAGLHFTPDLLEKIKARGIEEHFVTLHVGAGTFLPVKADDTGD 234
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+EIG + TA ALN+V RGGRI+ VGTTSLRL+E+AT EDG++ PWSG T+IFI
Sbjct: 235 HKMHAEIGHVSQRTASALNAVHERGGRIICVGTTSLRLIESATGEDGVVRPWSGATDIFI 294
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFRAVD+LM+NFHLP+STL MLVSAF G++ Y +AI+ YRFYSYGD SLL
Sbjct: 295 TPGYRFRAVDLLMTNFHLPRSTLFMLVSAFSGLDTMHAAYNYAIADGYRFYSYGDASLLE 354
Query: 358 Q 358
+
Sbjct: 355 R 355
>gi|153835756|ref|ZP_01988423.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
harveyi HY01]
gi|148867570|gb|EDL66888.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
harveyi HY01]
Length = 350
Score = 462 bits (1189), Expect = e-128, Method: Composition-based stats.
Identities = 142/363 (39%), Positives = 206/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N + D +D+ + + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQPERTASRLLQMDGNTG---ELIDGTFTDVLEQVQAGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + S + R SK K G +
Sbjct: 58 FNNTRVIPARLFGRKES-----GGKLEVLVERMLDEKSILAHVRCSKSPKPGTTILVGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D A ++ + + + + S + + +G +PLPPYI RP + D Y
Sbjct: 113 D---EYSAQMVARHDA--LFELKFNSDKTVLEILEEIGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G + +VTLHVGAGTF PVKV+D +DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDDVLLEKIKAKGAEFAYVTLHVGAGTFQPVKVDDINDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + A+N+ K+RGGRIV+VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQDVVDAINATKARGGRIVAVGTTSVRSLESAAQDALKKGTELVPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY ++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ + YRF+SYGD+ +
Sbjct: 286 IYPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYENTMNAYKHAVENKYRFFSYGDSMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 KKK 348
>gi|167770633|ref|ZP_02442686.1| hypothetical protein ANACOL_01979 [Anaerotruncus colihominis DSM
17241]
gi|167667228|gb|EDS11358.1| hypothetical protein ANACOL_01979 [Anaerotruncus colihominis DSM
17241]
Length = 342
Score = 462 bits (1189), Expect = e-128, Method: Composition-based stats.
Identities = 139/357 (38%), Positives = 194/357 (54%), Gaps = 15/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F F+LP +IA P+ PRD +R++ + + DLP +L++ D ++
Sbjct: 1 MKTSDFFFELPERQIAQTPIEPRDHSRMLYLDRQTGA---VKHLHFYDLPDYLDAGDTLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N ++VI A+L GV+ + L + + W V +P K K G F
Sbjct: 58 VNTSRVIPARLYGVK----EYSGGHMQFLLLEQKERDIWEVMVKPGKKAKTGARFVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L V+ G L+ G + + +G +PLPPYI + D Y
Sbjct: 111 -GDGLLVGEVLQTVEGGNRLVRMYYEGPSIYPVLEKIGNMPLPPYIT----AELSDRERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT L+ RL GI + V LHVG GTF PV+VED H M
Sbjct: 166 QTIYSKQPGSAAAPTAGLHFTPELIDRLREKGINLANVVLHVGIGTFRPVRVEDVTKHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ TA +N +RG R++ VGTTS R +E+ ++ G I G T+IFI PG
Sbjct: 226 HSEHYYLPQETADLINETHARGKRVIGVGTTSCRTVESVASKCGEIKADEGDTSIFIYPG 285
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+ +D L++NFHLP+STL+MLVSAF G E T + YQ A+ YRF+S+GD L+
Sbjct: 286 YTFKVLDGLITNFHLPESTLIMLVSAFAGYEHTMRAYQIAVGENYRFFSFGDAMLIL 342
>gi|254228677|ref|ZP_04922101.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio sp.
Ex25]
gi|262395137|ref|YP_003286991.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio sp.
Ex25]
gi|151938856|gb|EDN57690.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio sp.
Ex25]
gi|262338731|gb|ACY52526.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio sp.
Ex25]
Length = 350
Score = 462 bits (1189), Expect = e-128, Method: Composition-based stats.
Identities = 139/363 (38%), Positives = 205/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N + D +D+ + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQPERTASRLLQMDGNTG---ELIDGTFTDVLGQVQPGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + S + R SK K G +
Sbjct: 58 FNNTRVIPARLFGRKES-----GGKLEVLVERMLDEKSILAHVRCSKSPKPGTTIIVGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D A ++ + + + + + + + +G +PLPPYI RP + D Y
Sbjct: 113 D---EYSAEMVARHDA--LFELKFNADKTVLEILEEIGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G + +VTLHVGAGTF PVKVE+ +DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDDVLLEKIKAKGAEFAYVTLHVGAGTFQPVKVENINDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + +A+ + K+RGGRI++VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVEAIKATKARGGRIIAVGTTSVRSLESAAQDALKKGTELAPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY ++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ + YRF+SYGD+ +
Sbjct: 286 IFPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYENTMNAYKHAVENKYRFFSYGDSMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 KKK 348
>gi|313114158|ref|ZP_07799710.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Faecalibacterium cf. prausnitzii KLE1255]
gi|310623567|gb|EFQ06970.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Faecalibacterium cf. prausnitzii KLE1255]
Length = 342
Score = 462 bits (1189), Expect = e-128, Method: Composition-based stats.
Identities = 146/357 (40%), Positives = 198/357 (55%), Gaps = 15/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+ K+F +DLP IA P PRDSARLMV+ I + DLP FL D +V
Sbjct: 1 MLKKDFWYDLPKELIAQEPADPRDSARLMVL---SQKDDSIQHKIFHDLPEFLEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN+KV+ A++ GV+ L +V + W A+P K ++ G + F
Sbjct: 58 VNNSKVLPARIVGVK----QPTGAVCELLLLRQVKGDQWECLAKPGKRMQPGTKVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L A V + G + F L ++ G +PLPPYI ++ D Y
Sbjct: 111 -GDGSLTAVVDETMEDGNKYVTFYYDTETLYEKLDEFGKMPLPPYITKQ----LEDQSQY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT L+ + + G+ + VTLHVG GTF PV+ ++ DH M
Sbjct: 166 QTVYAKELGSAAAPTAGLHFTPELMDTIRAKGVNIAEVTLHVGLGTFRPVQEDEIADHKM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ID TAQ + K+ G R+++VGTTS R LE + G I SG T+IF+ PG
Sbjct: 226 HSEWYCIDEKTAQMIRDTKAAGHRVIAVGTTSCRTLEAVAAKYGEIRACSGNTSIFLYPG 285
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F +D L++NFHLP+STL+MLVSA G E+T Y+ A+ YRF+S+GD L+
Sbjct: 286 VKFNCIDGLITNFHLPESTLIMLVSALYGYEKTMAAYKVAVEERYRFFSFGDAMLIL 342
>gi|306841819|ref|ZP_07474502.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
sp. BO2]
gi|306288100|gb|EFM59494.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
sp. BO2]
Length = 363
Score = 462 bits (1188), Expect = e-128, Method: Composition-based stats.
Identities = 209/361 (57%), Positives = 256/361 (70%), Gaps = 9/361 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRPV PRD A+L+ V P D V DLP L DA+V
Sbjct: 1 MRVDLFDFDLPEERIALRPVEPRDHAKLLHVRPG----QPFEDRHVYDLPDLLQPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R + + +S TLHMRV P+ W + RP+K +K+GD + F
Sbjct: 57 FNDTKVIPAQLEGMRERTGSISQ--VSATLHMRVGPDRWKAFLRPAKRVKEGDRIRFGHS 114
Query: 121 DGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+ATV +K + GE LLVF +SG L+ I+ VG IPLPPYIA KRP D RD
Sbjct: 115 GTSCFLGTLDATVAEKGDAGEALLVFDLSGAVLDEAIAAVGHIPLPPYIASKRPEDERDR 174
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YA+ +G+VAAPTAGLHFT +LL ++ + GI+ +FVTLHVGAGTF+PVK +DT D
Sbjct: 175 KDYQTVYAREEGAVAAPTAGLHFTPDLLEKIKARGIEEHFVTLHVGAGTFLPVKADDTGD 234
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+EIG + TA ALN+V RGGRI+ VGTTSLRL+E+AT EDGI+ PWSG T+IFI
Sbjct: 235 HKMHAEIGHVSQRTASALNAVHERGGRIICVGTTSLRLIESATGEDGIVRPWSGATDIFI 294
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFRAVD+LM+NFHLP+STL MLVSAF G++ Y +AI+ YRFYSYGD SLL
Sbjct: 295 TPGYRFRAVDLLMTNFHLPRSTLFMLVSAFSGLDTMHAAYNYAIADGYRFYSYGDASLLE 354
Query: 358 Q 358
+
Sbjct: 355 R 355
>gi|170017579|ref|YP_001728498.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Leuconostoc
citreum KM20]
gi|169804436|gb|ACA83054.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Leuconostoc
citreum KM20]
Length = 355
Score = 462 bits (1188), Expect = e-128, Method: Composition-based stats.
Identities = 142/360 (39%), Positives = 208/360 (57%), Gaps = 13/360 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FD+DLP + IA P+ RD++RL+V+ + D D+ ++N DAIV
Sbjct: 8 QLADFDYDLPEALIAQTPLKQRDTSRLLVLDADTGA---YQDKHFYDILDYVNPGDAIVM 64
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NN++V+ A+L+GVR L + + W RP+K G + F
Sbjct: 65 NNSRVLPARLHGVR----PETGGHAEVLLLRQDHGDVWETLVRPAKKSPVGSTIVFGDDV 120
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
Q + ATV+ + G + F GI + +G +PLPPYI K D YQ
Sbjct: 121 TQPIMTATVVGELEHGGRYVEFHYDGI-FMALLDKLGEMPLPPYIKEKLA----DQERYQ 175
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T Y+K+ GS AAPTAGLH+T LL+++ + G+K +TLHVG GTF PV+ E+ +DH MH
Sbjct: 176 TVYSKVDGSAAAPTAGLHWTPELLNQVRAKGVKTVELTLHVGLGTFRPVEEENIEDHKMH 235
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPG 300
SE + A LN V+ GGRI++ GTTS+R LET ++ +G + SG+T+IFI PG
Sbjct: 236 SEFYQLSQDAADTLNQVRENGGRIIATGTTSIRTLETIGSKFEGKLQADSGWTDIFIKPG 295
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
Y++ VD ++NFHLPKSTL+MLV+AF G + YQHA++ YRF+S+GD + + +
Sbjct: 296 YKWTTVDAFITNFHLPKSTLVMLVAAFTGRDNILNAYQHAVAEQYRFFSFGDAMFIKRDK 355
>gi|169829376|ref|YP_001699534.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lysinibacillus sphaericus C3-41]
gi|238688195|sp|B1HVA2|QUEA_LYSSC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|168993864|gb|ACA41404.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lysinibacillus sphaericus C3-41]
Length = 346
Score = 462 bits (1188), Expect = e-128, Method: Composition-based stats.
Identities = 145/362 (40%), Positives = 202/362 (55%), Gaps = 18/362 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDF+LP IA P+ R ++RLMVV P + + + L + D +V
Sbjct: 1 MRVEDFDFELPEELIAQTPLVDRTASRLMVVTPGS---NEVEHQHFAHVLEELRTGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP-NSWSVYARPSKVIKKGDILHFFS 119
N+T+V+ A+L GV+ I L ++ + W +P+K +K G ++ F
Sbjct: 58 LNDTRVLPARLMGVK----EETGAHIEVLLLKQLPGTDEWETLVKPAKRVKVGTVITF-- 111
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G L AT + + G F GI E + +G +PLPPYI K D
Sbjct: 112 --GDGLLTATCTGELDHGGRTFEFHYDGIFFE-ILEQLGEMPLPPYIREK----LEDKDR 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK +GS AAPTAGLHFT LL ++ + G++V F+TLHVG GTF PV V+ ++H
Sbjct: 165 YQTVYAKERGSAAAPTAGLHFTEELLEQVKAKGVEVVFITLHVGLGTFRPVSVDSIENHE 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MH+E + A +N VK GG+I++VGTTS R LET ++ DG + G+T+IFI
Sbjct: 225 MHAEFYSVTEEAADTINRVKRNGGKIIAVGTTSTRTLETIGSKYDGEVRAEQGWTSIFIY 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY F VD L++NFHLPKSTL+MLVS E YQ A+ YRF+S+GD +
Sbjct: 285 PGYTFTVVDGLITNFHLPKSTLVMLVSTLATRETILSAYQQAVEEKYRFFSFGDAMFIRP 344
Query: 359 KR 360
K
Sbjct: 345 KE 346
>gi|329116810|ref|ZP_08245527.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus parauberis NCFD 2020]
gi|326907215|gb|EGE54129.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus parauberis NCFD 2020]
Length = 342
Score = 462 bits (1188), Expect = e-128, Method: Composition-based stats.
Identities = 154/357 (43%), Positives = 213/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RDS++L+++ + D + LN DA+V
Sbjct: 1 MNTNDFDFDLPEELIAQTPLEKRDSSKLLIIDHKK---ETMVDSHFDHIIKELNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + + L S + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGEK----PDTKGHVELLLLKNTSGDQWEVLAKPAKRLRVGSQVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATVI++ G ++ FS GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLSATVIEELEHGGRIVEFSYDGIFLE-VLESLGEMPLPPYIHEK----LEDSERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTQELLEKIEAKGVKLVYLTLHVGLGTFRPVSVDNVDEHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L VK+ GGR+++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAATTLRQVKADGGRVIAVGTTSIRTLETIGSKFKGEIVADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F VD +NFHLPKSTL+MLVSAF G + + Y+HA++ YRF+S+GD +
Sbjct: 285 GYQFTIVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYKHAVNEKYRFFSFGDAMFV 341
>gi|254418229|ref|ZP_05031953.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Brevundimonas sp. BAL3]
gi|196184406|gb|EDX79382.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Brevundimonas sp. BAL3]
Length = 372
Score = 462 bits (1188), Expect = e-128, Method: Composition-based stats.
Identities = 205/365 (56%), Positives = 244/365 (66%), Gaps = 12/365 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP RIALRP PRDSARL+VV + D ++ DLP FL DA+V
Sbjct: 7 MKTADFDFDLPEDRIALRPADPRDSARLLVV-----KDGALDDRIIRDLPDFLRPGDALV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREK---EISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
FN+T+VI A+L+GVR E + TLH R +P+ WS + +P K IK GD + F
Sbjct: 62 FNDTRVIPARLSGVRTRPGPEGETLTVAVEATLHHRDAPDVWSAFMKPGKRIKPGDRIRF 121
Query: 118 FSQDGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
+ RL+ATV K + G I L F +SG L+ I VG +PLPPYIA KRP D
Sbjct: 122 GQEADAACDLGRLDATVTAKGDDGLITLKFDLSGPALDDAIRDVGVMPLPPYIAAKRPED 181
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
RD DYQT +A+ GSVAAPTAGLHFT LL + + G+ + VTLHVGAGTF+PVK +
Sbjct: 182 DRDRSDYQTVFAEHDGSVAAPTAGLHFTPALLDAIRARGVSTHAVTLHVGAGTFLPVKAD 241
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
D DH MHSE G + TA ALN+V + GGRIV VGTTSLRLLE+ATTE G I P+ G T
Sbjct: 242 DLADHRMHSEWGEVSPETADALNAVHAAGGRIVCVGTTSLRLLESATTEAGEIRPFHGDT 301
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFITPGYRFRAVD+LM+NFHLPKSTL MLVSAF G K Y HAI+ YRFYSYGD
Sbjct: 302 AIFITPGYRFRAVDVLMTNFHLPKSTLFMLVSAFAGRAAMKTAYAHAIADGYRFYSYGDG 361
Query: 354 SLLFQ 358
SLLF+
Sbjct: 362 SLLFR 366
>gi|50914461|ref|YP_060433.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS10394]
gi|68053076|sp|Q5XBG3|QUEA_STRP6 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|50903535|gb|AAT87250.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS10394]
Length = 342
Score = 462 bits (1188), Expect = e-128, Method: Composition-based stats.
Identities = 155/357 (43%), Positives = 214/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF+LP IA P+ RDS++L+++ + D + LN DA+V
Sbjct: 1 MNTNDFDFELPEELIAQTPLEKRDSSKLLIIDHR---QKTMVDSHFDHIIDQLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K +K G ++F
Sbjct: 58 MNNTRVLPARLYGEK----PDTHGHVELLLLKNTQGDQWEVLAKPAKRLKVGSQVNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+AT+ID+ G ++ FS GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLKATIIDELEHGGRIVEFSYDGIFLE-VLESLGEMPLPPYIHEK----LEDAERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT++LL ++ + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTTDLLKKIEAKGVHLVYLTLHVGLGTFRPVSVDNLDEHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK GGR+V+VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRDVKQAGGRVVAVGTTSIRTLETIGSKFQGDIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ VD +NFHLPKSTL+MLVSAF G + + Y+HAI YRF+S+GD +
Sbjct: 285 GYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYRHAIDEKYRFFSFGDAMFV 341
>gi|269962429|ref|ZP_06176779.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase [Vibrio
harveyi 1DA3]
gi|269832925|gb|EEZ87034.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase [Vibrio
harveyi 1DA3]
Length = 350
Score = 462 bits (1188), Expect = e-128, Method: Composition-based stats.
Identities = 141/363 (38%), Positives = 206/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N + D +D+ + + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQPERTASRLLQMDGNTG---ELIDGTFTDVLEQVQAGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + S + R SK K G +
Sbjct: 58 FNNTRVIPARLFGRKES-----GGKLEVLVERMLDEKSILAHVRCSKSPKPGTTILVGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D A ++ + + + + + + + +G +PLPPYI RP + D Y
Sbjct: 113 D---EYSAQMVARHDA--LFELKFNADKTVLEILEEIGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G + +VTLHVGAGTF PVKV+D +DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDDVLLEKIKAKGAEFAYVTLHVGAGTFQPVKVDDINDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + A+N+ K+RGGRIV+VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQDVVDAINATKARGGRIVAVGTTSVRSLESAAQDALKKGTELVPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY ++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ + YRF+SYGD+ +
Sbjct: 286 IYPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYENTMNAYKHAVENKYRFFSYGDSMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 KKK 348
>gi|156973358|ref|YP_001444265.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
harveyi ATCC BAA-1116]
gi|166218756|sp|A7MT82|QUEA_VIBHB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|156524952|gb|ABU70038.1| hypothetical protein VIBHAR_01045 [Vibrio harveyi ATCC BAA-1116]
Length = 350
Score = 462 bits (1188), Expect = e-128, Method: Composition-based stats.
Identities = 143/363 (39%), Positives = 207/363 (57%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N + D SD+ + + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQPERTASRLLQMDGNTG---ELIDGTFSDVLEQVQAGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + ++ S + R SK K G +
Sbjct: 58 FNNTRVIPARLFGRKES-----GGKLEVLVERMLNEKSILAHVRCSKSPKPGTTILVGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D A ++ + + + + S + + +G +PLPPYI RP + D Y
Sbjct: 113 D---EYSAQMVARHDA--LFELKFNSDKTVLEILEEIGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G + +VTLHVGAGTF PVKV+D DDH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDDVLLEKITAKGAEFAYVTLHVGAGTFQPVKVDDIDDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + A+N+ K+RGGR+V+VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQDVVDAINATKARGGRVVAVGTTSVRSLESAAQDALKKGTELVPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY ++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ + YRF+SYGD+ +
Sbjct: 286 IYPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYENTMNAYKHAVENKYRFFSYGDSMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 KKK 348
>gi|19746363|ref|NP_607499.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS8232]
gi|306827089|ref|ZP_07460386.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes ATCC 10782]
gi|24212183|sp|Q8P0D9|QUEA_STRP8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|19748559|gb|AAL97998.1| putative S-adenosylmethionine-tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS8232]
gi|304430723|gb|EFM33735.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes ATCC 10782]
Length = 342
Score = 462 bits (1188), Expect = e-128, Method: Composition-based stats.
Identities = 154/357 (43%), Positives = 214/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF+LP IA P+ RDS++L+++ + D + LN DA+V
Sbjct: 1 MNTNDFDFELPEELIAQTPLEKRDSSKLLIIDHR---QKTMVDSHFDHIIDQLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K +K G ++F
Sbjct: 58 MNNTRVLPARLYGEK----PDTHGHVELLLLKNTQGDQWEVLAKPAKRLKVGSQVNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+AT+ID+ G ++ FS GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLKATIIDELEHGGRIVEFSYDGIFLE-VLESLGEMPLPPYIHEK----LEDAERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT++LL ++ + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTTDLLKKIEAKGVHLVYLTLHVGLGTFRPVSVDNLDEHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK GGR+V+VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRDVKQAGGRVVAVGTTSIRTLETIGSKFQGDIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ VD +NFHLPKSTL+MLVSAF G + + Y+HA+ YRF+S+GD +
Sbjct: 285 GYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYRHAVDEKYRFFSFGDAMFV 341
>gi|94994643|ref|YP_602741.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS10750]
gi|166218748|sp|Q1J5Y6|QUEA_STRPF RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|94548151|gb|ABF38197.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS10750]
Length = 342
Score = 461 bits (1187), Expect = e-128, Method: Composition-based stats.
Identities = 154/357 (43%), Positives = 215/357 (60%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF+LP IA P+ RDS++L+++ + D + LN DA+V
Sbjct: 1 MNTNDFDFELPEELIAQTPLEKRDSSKLLIIDHR---QKTMVDSHFDHIIDQLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K +K G ++F
Sbjct: 58 MNNTRVLPARLYGEK----PDTHGHVELLLLKNTQGDQWEVLAKPAKRLKVGSQVNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+AT+ID+ G ++ FS GI LE + +G +PLPPYI K +D Y
Sbjct: 111 -GDGRLKATIIDELEHGGRIVEFSYDGIFLE-VLESLGEMPLPPYIHEK----LKDAERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT++LL ++ + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTTDLLKKIEAKGVHLVYLTLHVGLGTFRPVSVDNLDEHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK GGR+V+VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRDVKQAGGRVVAVGTTSIRTLETIGSKFQGDIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ VD +NFHLPKSTL+MLVSAF G + + Y+HA+ YRF+S+GD +
Sbjct: 285 GYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYRHAVDEKYRFFSFGDAMFV 341
>gi|241890140|ref|ZP_04777438.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Gemella
haemolysans ATCC 10379]
gi|241863762|gb|EER68146.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Gemella
haemolysans ATCC 10379]
Length = 342
Score = 461 bits (1187), Expect = e-128, Method: Composition-based stats.
Identities = 146/358 (40%), Positives = 208/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++FDF LP IA P+ RD+++L+ V + + SD+ + N D +V
Sbjct: 1 MKLEQFDFYLPEELIAQTPLLKRDTSKLLCVDRKNNS---HEHKVFSDIIDYFNPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + I L + N W +P+K IK+G I+ F
Sbjct: 58 LNNTRVMPARLYGAK----KDTGAAIEVLLLKNLGHNDWECLVKPAKRIKEGGIVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +EA + G F GI + ++ +GT+PLPPYI + D Y
Sbjct: 111 -GDGIMEAVCTKVLDDGFRHFEFKYEGI-FQERLDELGTMPLPPYIKERLT----DKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT+ LL ++ G+ + ++TLHVG GTF PV VE+ ++H M
Sbjct: 165 QTVYSKEVGSSAAPTAGLHFTNELLEKIKEKGVNIAYLTLHVGLGTFRPVAVENIEEHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE +D TA+ +N K GGR+ SVGTTS R LET A +G I SG+TNIFI P
Sbjct: 225 HSEYYTLDEDTARIINKTKEDGGRVFSVGTTSTRTLETIARDNNGKIVAASGWTNIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
G+ F+ VD L++NFHLPKS+L+MLVSAF E+ ++Y A+ + YRF+S+GD ++
Sbjct: 285 GFEFKCVDGLITNFHLPKSSLIMLVSAFYDREKVIELYNIAVENKYRFFSFGDAMIII 342
>gi|313637715|gb|EFS03084.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
seeligeri FSL S4-171]
Length = 342
Score = 461 bits (1187), Expect = e-128, Method: Composition-based stats.
Identities = 152/357 (42%), Positives = 216/357 (60%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++L+ DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKATG---EIKDQHFTDILSYLHEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G + + I L + N+W +P+K I++G + F
Sbjct: 58 LNDTRVLPARLHGTK----DETGAHIEVLLLKQKEGNAWETLVKPAKRIRQGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+AT +++ G +L FS GI + +G +PLPPYI + D Y
Sbjct: 111 -GDGALKATCLEELEHGGRILEFSYEGI-FYEVLEQLGEMPLPPYIKEQLA----DQDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ + G+++ FVTLHVG GTF PV VEDT +H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEDLLAKIKAKGVEIIFVTLHVGLGTFRPVDVEDTANHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + A+ +N VK GG++V+VGTTS+R LET A+ +G + SG+T IFI+P
Sbjct: 225 HSEFYRLTEEAAERINKVKETGGKVVAVGTTSIRTLETIASRHEGELVAESGWTEIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+AVD L++NFHLPKSTL+MLV + Y HA+ YRF+S+GD +
Sbjct: 285 GYTFQAVDALITNFHLPKSTLIMLVXXLSDRNKILTAYNHAVEQQYRFFSFGDAMFI 341
>gi|94990719|ref|YP_598819.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS10270]
gi|166218747|sp|Q1JG69|QUEA_STRPD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|94544227|gb|ABF34275.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS10270]
Length = 342
Score = 461 bits (1186), Expect = e-128, Method: Composition-based stats.
Identities = 153/357 (42%), Positives = 213/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF+LP IA P+ RDS++L+++ + D + LN DA+V
Sbjct: 1 MNTNDFDFELPEELIAQTPLEKRDSSKLLIIDHR---QKTMVDSHFDHIIDQLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K +K G ++F
Sbjct: 58 MNNTRVLPARLYGEK----PDTHGHVELLLLKNTQGDQWEVLAKPAKRLKVGSQVNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+AT+ID+ G ++ FS GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GNGHLKATIIDELEHGGRIVEFSYDGIFLE-VLESLGEMPLPPYIHEK----LEDAERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT++LL ++ + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTTDLLKKIEAKGVHLVYLTLHVGLGTFRPVSVDNLDEHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK GGR+V+VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRDVKQAGGRVVAVGTTSIRTLETIGSKFQGDIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ VD +NFHLPKSTL+MLVSAF G + + Y+HA+ YRF+S+GD +
Sbjct: 285 GYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYRHAVDEKYRFFSFGDAMFV 341
>gi|145299556|ref|YP_001142397.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Aeromonas
salmonicida subsp. salmonicida A449]
gi|166216696|sp|A4SP27|QUEA_AERS4 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|142852328|gb|ABO90649.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase [Aeromonas
salmonicida subsp. salmonicida A449]
Length = 355
Score = 461 bits (1186), Expect = e-128, Method: Composition-based stats.
Identities = 133/364 (36%), Positives = 204/364 (56%), Gaps = 16/364 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R ++RL+ + + D+ LN D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPMAERTASRLLQLDGQSGA---LRHGQFVDVLDQLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + +S + R SK K G L
Sbjct: 58 FNNTRVIPARMFGQKAS-----GGKLEVLVERILDEHSVLAHVRASKAPKPGTRLILDGG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+++A + + + + + + + + +G +PLPPYI RP + D Y
Sbjct: 113 PDGEKVDAEMRARHDA--LFEIHFLDPRPVLEILEAIGHMPLPPYI--DRPDEDADKERY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL+++ + G++ FVTLHVGAGTF PV+V+ +DH M
Sbjct: 169 QTVYNQKPGAVAAPTAGLHFDEPLLAKIRAKGVETAFVTLHVGAGTFQPVRVDKIEDHHM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE----DGIINPWSGFTNIF 296
HSE + A+ + ++RGGR+++VGTTS+R LE+A + P+ T+IF
Sbjct: 229 HSEYAEVPQEVVDAIAATRARGGRVIAVGTTSVRSLESAAKASLALSKPLAPFFSDTDIF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+F+ VD +++NFHLP+STL+MLVSAF G + YQ A++ YRF+SYGD +
Sbjct: 289 IFPGYQFQVVDAMVTNFHLPESTLIMLVSAFAGYDHVMAAYQAAVAEQYRFFSYGDAMFV 348
Query: 357 FQKR 360
++R
Sbjct: 349 TRRR 352
>gi|254693807|ref|ZP_05155635.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 3 str. Tulya]
gi|261214086|ref|ZP_05928367.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 3 str. Tulya]
gi|260915693|gb|EEX82554.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
abortus bv. 3 str. Tulya]
Length = 363
Score = 461 bits (1186), Expect = e-128, Method: Composition-based stats.
Identities = 209/361 (57%), Positives = 256/361 (70%), Gaps = 9/361 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRPV PRD A+L+ V P D V DLP L DA+V
Sbjct: 1 MRVDLFDFDLPEERIALRPVEPRDHAKLLHVRPG----EPFEDRHVYDLPDLLQPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R N + +S TLHMRV P+ W + RP+K +K+GD + F
Sbjct: 57 FNDTKVIPAQLEGMRERTGNISQ--VSATLHMRVGPDRWKAFLRPAKRVKEGDRIRFGHS 114
Query: 121 DGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+ATV +K ++GE LLVF +SG L+ I+ VG IPLPPYIA KRP D RD
Sbjct: 115 GTSCFLGTLDATVAEKGDSGEALLVFDLSGAVLDEAIAAVGHIPLPPYIASKRPEDERDR 174
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YA+ +G+VAAPTAGLHFT +LL ++ + GI+ +FVTLHVGAGTF+PVK +DT D
Sbjct: 175 KDYQTVYAREEGAVAAPTAGLHFTPDLLEKIKARGIEEHFVTLHVGAGTFLPVKADDTGD 234
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+EIG + TA ALN+V RGGRI+ VGTTSLRL+E+AT EDG++ PWSG T IFI
Sbjct: 235 HKMHAEIGHVSQRTASALNAVHERGGRIICVGTTSLRLIESATGEDGVVRPWSGATYIFI 294
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFRAVD+LM+NFHLP+STL MLVSAF G++ Y +AI+ YRFYSYGD SLL
Sbjct: 295 TPGYRFRAVDLLMTNFHLPRSTLFMLVSAFSGLDTMHAAYNYAIADGYRFYSYGDASLLE 354
Query: 358 Q 358
+
Sbjct: 355 R 355
>gi|306843960|ref|ZP_07476555.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
sp. BO1]
gi|306275715|gb|EFM57439.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
sp. BO1]
Length = 363
Score = 461 bits (1186), Expect = e-128, Method: Composition-based stats.
Identities = 208/361 (57%), Positives = 256/361 (70%), Gaps = 9/361 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRPV PRD A+L+ + P D V DLP L DA+V
Sbjct: 1 MRVDLFDFDLPEERIALRPVEPRDHAKLLHIRPG----QPFEDRHVYDLPDLLQPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R N + +S TLHMRV P+ W + RP+K +K+GD + F
Sbjct: 57 FNDTKVIPAQLEGMRERTGNISQ--VSATLHMRVGPDRWKAFLRPAKRVKEGDRIRFGHS 114
Query: 121 DGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+ATV +K + GE LLVF +SG L+ I+ VG IPLPPYIA KRP D RD
Sbjct: 115 GTSCFLGTLDATVAEKGDAGEALLVFDLSGAVLDEAIAAVGHIPLPPYIASKRPEDERDR 174
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YA+ +G+VAAPTAGLHFT +LL ++ + GI+ +FVTLHVGAGTF+PVK +DT D
Sbjct: 175 KDYQTVYAREEGAVAAPTAGLHFTPDLLEKIKARGIEEHFVTLHVGAGTFLPVKADDTGD 234
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+EIG + TA ALN+V RGGRI+ VGTTSLRL+E+A+ EDGI+ PWSG T+IFI
Sbjct: 235 HKMHAEIGHVSQRTASALNAVHERGGRIICVGTTSLRLIESASGEDGIVRPWSGATDIFI 294
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFRAVD+LM+NFHLP+STL MLVSAF G++ Y +AI+ YRFYSYGD SLL
Sbjct: 295 TPGYRFRAVDLLMTNFHLPRSTLFMLVSAFSGLDTMHAAYNYAIADDYRFYSYGDASLLE 354
Query: 358 Q 358
+
Sbjct: 355 R 355
>gi|323341474|ref|ZP_08081715.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus ruminis ATCC 25644]
gi|323091085|gb|EFZ33716.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus ruminis ATCC 25644]
Length = 350
Score = 461 bits (1186), Expect = e-128, Method: Composition-based stats.
Identities = 144/358 (40%), Positives = 209/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++FD+DLP IA P+ RD +RL+V+ D ++ LN DA+V
Sbjct: 9 LTTEDFDYDLPQELIAQTPLKERDQSRLLVLDSKTGK---YQDDYFYNVIDRLNPGDALV 65
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+++V+ A+L GV+ + L ++W +P+K K G + F
Sbjct: 66 MNDSRVMPARLYGVK----PETGGHVEVLLLNNTDGDNWETLVKPAKRAKVGTEISF--- 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L ATV ++ G ++ F GI + +G +PLPPYI K D Y
Sbjct: 119 -GDGKLTATVTEELEHGGRMIEFHYDGI-FMEILDQLGEMPLPPYIKEKLD----DPEMY 172
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ GS AAPTAGLHFT+ LL ++ G+K+ ++TLHVG GTF PV E+ +DH M
Sbjct: 173 QTVYSREIGSAAAPTAGLHFTTELLKKIEDKGVKLVYLTLHVGLGTFRPVSEENIEDHKM 232
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A+ LN VK+ GGRIV+ GTTS+R LET T+ +G I SG+T+IFI P
Sbjct: 233 HSEFYRLTEDAAKTLNEVKANGGRIVATGTTSIRTLETIGTKFNGEIRADSGWTDIFIKP 292
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY+++ VD ++NFHLPKSTL+MLV++F G E Y+HA+S YRF+S+GD ++
Sbjct: 293 GYKWQVVDAFITNFHLPKSTLVMLVASFTGRENILNAYRHAVSEKYRFFSFGDAMFIY 350
>gi|71903796|ref|YP_280599.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS6180]
gi|94988817|ref|YP_596918.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS9429]
gi|94992703|ref|YP_600802.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS2096]
gi|139473569|ref|YP_001128285.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes str. Manfredo]
gi|91207330|sp|Q48SR6|QUEA_STRPM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|166218745|sp|Q1JB00|QUEA_STRPB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|166218746|sp|Q1JL45|QUEA_STRPC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|166218749|sp|A2RDX5|QUEA_STRPG RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|71802891|gb|AAX72244.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS6180]
gi|94542325|gb|ABF32374.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS9429]
gi|94546211|gb|ABF36258.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS2096]
gi|134271816|emb|CAM30050.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes str. Manfredo]
Length = 342
Score = 461 bits (1186), Expect = e-128, Method: Composition-based stats.
Identities = 154/357 (43%), Positives = 213/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF+LP IA P+ RDS++L+++ + D + LN DA+V
Sbjct: 1 MNTNDFDFELPEELIAQTPLEKRDSSKLLIIDHR---QKTMVDSHFDHIIDQLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K +K G ++F
Sbjct: 58 MNNTRVLPARLYGEK----PDTHGHVELLLLKNTQGDQWEVLAKPAKRLKVGSQVNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+AT+ID+ G ++ FS GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLKATIIDELEHGGRIVEFSYDGIFLE-VLESLGEMPLPPYIHEK----LEDAERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT++LL ++ + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTTDLLKKIEAKGVHLVYLTLHVGLGTFRPVSVDNLDEHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK GGR+V+VGTTS+R LET + G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRDVKQAGGRVVAVGTTSIRTLETIGGKFQGDIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ VD +NFHLPKSTL+MLVSAF G + + Y+HA+ YRF+S+GD +
Sbjct: 285 GYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYRHAVDEKYRFFSFGDAMFV 341
>gi|15673557|ref|NP_267731.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Lactococcus
lactis subsp. lactis Il1403]
gi|13878678|sp|Q9CFA6|QUEA_LACLA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|12724579|gb|AAK05673.1|AE006388_4 S-adenosylmethionine tRNA ribosyltransferase [Lactococcus lactis
subsp. lactis Il1403]
gi|326407043|gb|ADZ64114.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Lactococcus
lactis subsp. lactis CV56]
Length = 345
Score = 461 bits (1186), Expect = e-128, Method: Composition-based stats.
Identities = 148/361 (40%), Positives = 212/361 (58%), Gaps = 17/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA P+ R +RL+++ P + D ++ L + DA+V
Sbjct: 1 MNINDFDFDLPEELIAQTPLEKRSESRLLILDPKT---EELEDRHFYNIIDELEAGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L+G R I L + N W A+P++ +K G+ + F
Sbjct: 58 LNNTRVLPARLHGERA----ETGGHIELLLLKDMGQNRWETLAKPARKMKVGEEVVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A V++ + G ++ F GI LE + +G +PLPPYI + +D Y
Sbjct: 111 -GDGRLKAVVVEVLDHGGRIVEFKYDGIFLE-ILESLGEMPLPPYIHEQ----LQDQERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +AK GS AAPTAGLH+T LL ++ G+K+ +TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVFAKENGSAAAPTAGLHYTPELLEKIADKGVKIVELTLHVGLGTFRPVSVDNVDEHQM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L +VK+ G +IV+ GTTS+R LET ++ DG I SG+T+IFI P
Sbjct: 225 HSEFYRLTEEAAAQLRAVKASGHKIVASGTTSIRTLETIGSKFDGDIQADSGWTDIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY ++ VD +NFHLPKSTL+MLV+AF G + YQHAI YRF+S+GD + K
Sbjct: 285 GYEWKVVDAFNTNFHLPKSTLVMLVAAFAGRDFVLDAYQHAIDEKYRFFSFGDAMFVRPK 344
Query: 360 R 360
+
Sbjct: 345 K 345
>gi|325290229|ref|YP_004266410.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Syntrophobotulus glycolicus DSM 8271]
gi|324965630|gb|ADY56409.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Syntrophobotulus glycolicus DSM 8271]
Length = 340
Score = 461 bits (1186), Expect = e-128, Method: Composition-based stats.
Identities = 147/356 (41%), Positives = 202/356 (56%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+FD+DLP IA PV PRD +RLMVV+ + L ++ F D +V
Sbjct: 1 MRVKDFDYDLPAELIAQHPVEPRDHSRLMVVNKEKG---ELFHALFKEIVDFFQPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKVI A+L GV+ +I L R ++W V +P K +K G + F
Sbjct: 58 VNKTKVIPARLFGVK----EGTGAKIEILLLNRKETDTWEVLVKPGKRLKIGQRVIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ RL +++ G ++ F G+ E + +G +PLPPYI K Y
Sbjct: 111 -GEGRLIGELLEILPDGNRIIKFLYQGL-FENILDQLGQVPLPPYITEKLEN----QERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT L+ ++ + G + + LHVG GTF PVK E+ +DH+M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTERLMDQIKAKGADIQEIVLHVGLGTFRPVKAENIEDHLM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E I A+ +N+ K+RG RI++VGTT R LE A +G + + +T+IFI PG
Sbjct: 225 HTEYYQIGLQAAETINAAKARGSRIIAVGTTVSRSLEAAAV-NGKVEAGASWTDIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+ VD L++NFH P+STLLMLVSA G E K Y+ A+ YRFYS+GD +
Sbjct: 284 YTFQIVDALITNFHFPRSTLLMLVSALAGQELMLKAYETAVREKYRFYSFGDAMFI 339
>gi|238926810|ref|ZP_04658570.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Selenomonas flueggei ATCC 43531]
gi|238885342|gb|EEQ48980.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Selenomonas flueggei ATCC 43531]
Length = 343
Score = 461 bits (1186), Expect = e-128, Method: Composition-based stats.
Identities = 150/356 (42%), Positives = 211/356 (59%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+ LP +IA P PRDS+R+MV+ P I L +L D ++
Sbjct: 1 MNISDFDYFLPEEQIAQVPADPRDSSRMMVLSPKTQS---IEHRHFYQLDEYLTDGDVLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L GVR + L ++ + W V +P K ++ G ++ F +
Sbjct: 58 FNDTRVIPARLIGVR----QPTGGKAEVFLLRQLERDRWEVLVKPGKKMRVGSVITFGHE 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L V+ + G ++ FS GI E + +GT+PLPPYI D Y
Sbjct: 114 -----LSCEVLAYTDFGGRIVKFSYEGI-FEEILDRLGTMPLPPYIHE----TLEDPERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ +GS AAPTAGLHFT +L+ RL G+ + FVTLHVG GTF PV+V++ +DH+M
Sbjct: 164 QTIYSREKGSAAAPTAGLHFTESLMDRLRKKGVHLGFVTLHVGLGTFRPVQVDEIEDHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I TA + K G R+V+VGTTS+R LE+A + G+I G TNIFI PG
Sbjct: 224 HSEFYSIPTETADLIRMAKQEGRRVVAVGTTSIRTLESAAVDHGMIEEKRGQTNIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD +++NFHLPKSTL+MLVSAF G E T + Y+ A+ YRF+S+GD L+
Sbjct: 284 YQFKIVDAVITNFHLPKSTLIMLVSAFAGREFTLQAYRTAVEENYRFFSFGDAMLI 339
>gi|209559631|ref|YP_002286103.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes NZ131]
gi|238058400|sp|B5XM46|QUEA_STRPZ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|209540832|gb|ACI61408.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase
[Streptococcus pyogenes NZ131]
Length = 342
Score = 461 bits (1186), Expect = e-127, Method: Composition-based stats.
Identities = 153/357 (42%), Positives = 213/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF+LP IA P+ RDS++L+++ + D + LN DA+V
Sbjct: 1 MNTNDFDFELPEELIAQTPLEKRDSSKLLIIDHR---QKTMVDSHFDHIIDQLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K +K G ++F
Sbjct: 58 MNNTRVLPARLYGEK----TDTHGHVELLLLKNTQGDQWEVLAKPAKRLKVGSQVNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+AT+ID+ G ++ FS GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGHLKATIIDELEHGGRIVEFSYDGIFLE-VLESLGEMPLPPYIHEK----LEDAERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT++LL ++ + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTTDLLKKIEAKGVHLVYLTLHVGLGTFRPVSVDNLDEHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK GGR+V+VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRDVKQAGGRVVAVGTTSIRTLETIGSKFQGDIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ VD +NFHLPKSTL+MLVSAF G + + Y+HA+ YRF+S+GD +
Sbjct: 285 GYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYRHAVDEKYRFFSFGDAMFV 341
>gi|21910602|ref|NP_664870.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS315]
gi|25091088|sp|Q8K6Z3|QUEA_STRP3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|21904803|gb|AAM79673.1| putative S-adenosylmethionine-tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS315]
Length = 342
Score = 460 bits (1185), Expect = e-127, Method: Composition-based stats.
Identities = 153/357 (42%), Positives = 213/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF+LP IA P+ RDS++L+++ + D + LN DA+V
Sbjct: 1 MNTNDFDFELPEELIAQTPLEKRDSSKLLIIDHR---QKTMVDSHFDHIIDQLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K +K G ++F
Sbjct: 58 MNNTRVLPARLYGEK----PDTHGHVELLLLKNTQGDQWEVLAKPAKRLKVGSQVNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+AT+ID+ G ++ FS GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGHLKATIIDELEHGGRIVEFSYDGIFLE-VLESLGEMPLPPYIHEK----LEDAERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT++LL ++ + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTTDLLKKIEAKGVHLVYLTLHVGLGTFRPVSVDNLDEHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK GGR+V+VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRDVKQAGGRVVAVGTTSIRTLETIGSKFQGDIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ VD +NFHLPKSTL+MLVSAF G + + Y+HA+ YRF+S+GD +
Sbjct: 285 GYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYRHAVDEKYRFFSFGDAMFV 341
>gi|296111819|ref|YP_003622201.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Leuconostoc
kimchii IMSNU 11154]
gi|295833351|gb|ADG41232.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Leuconostoc
kimchii IMSNU 11154]
Length = 353
Score = 460 bits (1185), Expect = e-127, Method: Composition-based stats.
Identities = 139/358 (38%), Positives = 203/358 (56%), Gaps = 13/358 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FD++LP IA P+ RDS+RL+V+ + D D+ +++N DAIV
Sbjct: 8 QLTDFDYNLPEELIAQTPLKQRDSSRLLVLDADSGD---YEDKHFYDILSYVNPGDAIVM 64
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NN++V+ A+L+G R L + + W +P+K G + F
Sbjct: 65 NNSRVLPARLHGAR----PETGGHAEVLLLRQDHGDVWETLVKPAKKSPIGSTIVFGDDM 120
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ ATV+ + G + F GI + +G +PLPPYI K D YQ
Sbjct: 121 NHPIMTATVVGELEHGGRYIEFHYDGI-FMELLDKLGEMPLPPYIKEKLA----DQERYQ 175
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T Y+K+ GS AAPTAGLH+T LL ++ + G++ +TLHVG GTF PV+ E+ +DH MH
Sbjct: 176 TVYSKVDGSAAAPTAGLHWTPELLDKVRAKGVQTVELTLHVGLGTFRPVEEENIEDHKMH 235
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPG 300
SE + A ALN V + GGRI++ GTTS+R LET ++ +G + SG+T+IFI PG
Sbjct: 236 SEFYQLSQEAADALNQVHANGGRIIATGTTSIRTLETIGSKFNGHLQADSGWTDIFIKPG 295
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y + VD ++NFHLPKSTL+MLV+AF G + YQHA+ YRF+S+GD + +
Sbjct: 296 YHWTTVDAFITNFHLPKSTLVMLVAAFTGRDNILNAYQHAVDDKYRFFSFGDAMFIKR 353
>gi|313890811|ref|ZP_07824436.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pseudoporcinus SPIN 20026]
gi|313120912|gb|EFR44026.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pseudoporcinus SPIN 20026]
Length = 342
Score = 460 bits (1185), Expect = e-127, Method: Composition-based stats.
Identities = 156/357 (43%), Positives = 209/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF+LP IA P+ RDS++L+++ + D + LN DA+V
Sbjct: 1 MNTNDFDFELPEELIAQTPLEQRDSSKLLIIDHK---AKTMVDSHFDHIIDQLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L+G + + L + + W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLHGEK----PDTHGHVELLLLKNIQGDDWEVLAKPAKRLKVGSSISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATVI + G ++ FS GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVIKELEHGGRIVSFSYQGIFLE-VLESLGEMPLPPYIHEKLD----DSERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTQALLQKIQEKGVHLVYLTLHVGLGTFRPVSVDNVDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L VK GGR+V+VGTTS+R LET + +G I SG+TNIFI P
Sbjct: 225 HSEFYQLSEEAADTLRQVKKAGGRVVAVGTTSIRTLETIGNKFNGDIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GYRF VD +NFHLPKSTL+MLVSAF G E + Y+HAI+ YRF+S+GD +
Sbjct: 285 GYRFTVVDAFSTNFHLPKSTLVMLVSAFAGREFVLEAYKHAINEHYRFFSFGDAMFV 341
>gi|223985620|ref|ZP_03635671.1| hypothetical protein HOLDEFILI_02977 [Holdemania filiformis DSM
12042]
gi|223962435|gb|EEF66896.1| hypothetical protein HOLDEFILI_02977 [Holdemania filiformis DSM
12042]
Length = 340
Score = 460 bits (1185), Expect = e-127, Method: Composition-based stats.
Identities = 144/356 (40%), Positives = 194/356 (54%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M EFDF+LP IA P+ R ++RL+V+H + I D+ +L D +V
Sbjct: 1 MKTSEFDFELPQELIAQTPLAKRSASRLLVLHRSTGA---IEHRHFYDIVDYLKPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G + + L + + W +KV+K G I+ F
Sbjct: 58 RNNTRVIPARLFGTK----EGTGAHVELLLLRQ-EGDEWECLVGNAKVVKLGTIISF--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ L+A I G GI + +G +PLPPYI K D Y
Sbjct: 110 -NEGELKAECIGIGEKGLRQFRMIYDGI-FYEILEKLGNVPLPPYIKEK----LNDPERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK++GS AAPTAGLHFT L +L + G++V +TLHVG GTF P+ ED DH M
Sbjct: 164 QTVYAKVKGSAAAPTAGLHFTPELFDQLKAKGVEVEDITLHVGLGTFRPMDTEDIADHHM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D TA LN K+ G RI++VGTTS R LE ++ G T+IFI PG
Sbjct: 224 HSEFFMMDQATADRLNQAKAEGRRIIAVGTTSCRTLEAIMSKYGEFRECHEDTDIFIFPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+A+D L++NFHLPKSTL+MLVSAF ++ YQ AI YRF+S+GD+ +
Sbjct: 284 YSFQAIDGLITNFHLPKSTLVMLVSAFATKDQIMTAYQAAIDEKYRFFSFGDSMFI 339
>gi|37678929|ref|NP_933538.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
vulnificus YJ016]
gi|320157295|ref|YP_004189674.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
vulnificus MO6-24/O]
gi|46576906|sp|Q7MNH2|QUEA_VIBVY RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|37197671|dbj|BAC93509.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase [Vibrio
vulnificus YJ016]
gi|319932607|gb|ADV87471.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
vulnificus MO6-24/O]
Length = 350
Score = 460 bits (1184), Expect = e-127, Method: Composition-based stats.
Identities = 136/363 (37%), Positives = 209/363 (57%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ ++ N + D D+ + + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQSERTASRLLQLNGNTGA---VKDGSFKDVLELVQAGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + + + R SK K G ++ +
Sbjct: 58 FNNTRVIPARMFGRKES-----GGKLEVLVERMLDEKRFLAHVRSSKSPKPGTLVFLGEE 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D + A ++ + + + + + + + +G +PLPPYI RP + D Y
Sbjct: 113 D---QYSAEMVARQDA--LFELHLKADKTILEVLEEIGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF + LL ++ + G + +VTLHVGAGTF PVKV++ +H M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDNQLLEQIKAKGAEFAYVTLHVGAGTFQPVKVDNILEHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDG----IINPWSGFTNIF 296
HSE + A+ + K+RGGR+++VGTTS+R LE+A E + P+ G T IF
Sbjct: 226 HSEYAEVPQEVVDAIKATKARGGRVIAVGTTSVRSLESAAQESLKNGTELMPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+++ VD L++NFHLP+STL+MLVSAF G + T YQHA+++ YRF+SYGD +
Sbjct: 286 IFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYDHTMNAYQHAVANQYRFFSYGDAMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 EKK 348
>gi|224543527|ref|ZP_03684066.1| hypothetical protein CATMIT_02736 [Catenibacterium mitsuokai DSM
15897]
gi|224523554|gb|EEF92659.1| hypothetical protein CATMIT_02736 [Catenibacterium mitsuokai DSM
15897]
Length = 350
Score = 460 bits (1184), Expect = e-127, Method: Composition-based stats.
Identities = 141/356 (39%), Positives = 194/356 (54%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++ FD++LP IA P+ RD++RLMV+ + D+ +L D +V
Sbjct: 10 MDIELFDYNLPEELIAQTPLKKRDTSRLMVLDKETGN---VEHKHFYDILDYLKPGDVLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L G++ + L + + W +K++K G ++ F
Sbjct: 67 RNNTKVIPARLYGLK----EETGGHVEVLLLKDLHDDLWECLVGNAKIVKLGTVITF--- 119
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A + G + GI + +G +PLPPYI K D Y
Sbjct: 120 -GDGRLKAQCTEIREEGIRIFKMIYDGI-FYEILDQLGIMPLPPYIKEK----LNDPDRY 173
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK++GS AAPTAGLHFT LL ++ G+++ VTLHVG GTF PVKVE+ +H M
Sbjct: 174 QTVYAKVEGSAAAPTAGLHFTEELLQKVREKGVEILDVTLHVGLGTFRPVKVENVLEHHM 233
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I A+ LN K G RI++VGTTS R LE ++ G TNIFI PG
Sbjct: 234 HSEYYEISEEVAEKLNQAKKEGRRIIAVGTTSCRTLEANHSKYGCFKAAHENTNIFIYPG 293
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F +D L++NFHLPKSTL+MLVSA G E Y+ A++ YRF+S+GD +
Sbjct: 294 YTFTGIDALITNFHLPKSTLVMLVSALAGREHILNAYKIAVNEKYRFFSFGDAMFI 349
>gi|239831893|ref|ZP_04680222.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Ochrobactrum intermedium LMG 3301]
gi|239824160|gb|EEQ95728.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Ochrobactrum intermedium LMG 3301]
Length = 363
Score = 460 bits (1184), Expect = e-127, Method: Composition-based stats.
Identities = 206/361 (57%), Positives = 253/361 (70%), Gaps = 9/361 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP IALRP+ PRD ARL+ V P D V +LP L+ DA+V
Sbjct: 1 MRVDLFDFDLPEESIALRPIEPRDHARLLRVRPG----QPFEDRQVFELPDLLHPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R N + +S TLHMR + W + RP+K +K+GD + F
Sbjct: 57 FNDTKVIPAQLEGMRERDGNISQ--VSATLHMRSGADRWKAFLRPAKRVKEGDRIRFGHS 114
Query: 121 DGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+ATV +K + GE LLVF +SG L+ I+ VG IPLPPYIA KR D RD
Sbjct: 115 GSSCFLGTLDATVAEKGDAGEALLVFDLSGAMLDEAIASVGHIPLPPYIASKRAEDERDR 174
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YA+ +G+VAAPTAGLHFT LL ++ + G++ +FVTLHVGAGTF+PVK +DT D
Sbjct: 175 KDYQTVYAREEGAVAAPTAGLHFTPELLEKIKAKGVEEHFVTLHVGAGTFLPVKADDTAD 234
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MHSEIG + TA ALN+V RGGRIV VGTTSLRL+E+A EDG+I PWSG T+IFI
Sbjct: 235 HKMHSEIGHVSQRTADALNAVHERGGRIVCVGTTSLRLIESAAGEDGVIRPWSGATDIFI 294
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGY+FRAVD+LM+NFHLP+STL MLVSAF G++ + Y HAIS+ YRFYSYGD SLL
Sbjct: 295 TPGYKFRAVDLLMTNFHLPRSTLFMLVSAFSGLDTMRAAYDHAISNGYRFYSYGDGSLLE 354
Query: 358 Q 358
+
Sbjct: 355 R 355
>gi|251798373|ref|YP_003013104.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Paenibacillus sp. JDR-2]
gi|247545999|gb|ACT03018.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Paenibacillus sp. JDR-2]
Length = 348
Score = 460 bits (1184), Expect = e-127, Method: Composition-based stats.
Identities = 149/360 (41%), Positives = 208/360 (57%), Gaps = 15/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP IA P+ R ++RL+ ++ I+ +DL ++N+ D +V
Sbjct: 1 MNVDWFDFELPEHLIAQTPLADRTASRLLALNKETG---EIAHRTFTDLAEYMNAGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS- 119
NNT+VI A+L GV+ +I L ++ + W A+P+K IK G L F
Sbjct: 58 LNNTRVIPARLTGVK----PDTGAKIELLLLKQLEGDRWETLAKPAKRIKVGSELWFGDN 113
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G+ L A V D+ + G + F GI + + +G +PLPPYI + +
Sbjct: 114 GSGEPLLRAIVEDEGDMGGRTIRFRYEGI-FQELLDRLGEMPLPPYIKER----LEERER 168
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK +GS AAPTAGLHFT L +L+ G+K+ ++TLHVG GTF P+ V+ ++H
Sbjct: 169 YQTVYAKHEGSAAAPTAGLHFTKEFLQQLVDKGVKLAYITLHVGLGTFRPMSVDKVEEHE 228
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE--TATTEDGIINPWSGFTNIFI 297
MHSE +D A +N KS G RI++VGTTS R LE A E G I +G+T+IFI
Sbjct: 229 MHSEYYELDEQNAVIINEAKSSGARIIAVGTTSSRTLETVAARFEGGPIEACNGWTDIFI 288
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY F+ VD L++NFHLPKSTL+MLVSA G E K Y A+ YRF+S+GD ++
Sbjct: 289 FPGYNFKLVDALLTNFHLPKSTLVMLVSALAGREAIMKAYGEAVREEYRFFSFGDAMFIY 348
>gi|262274808|ref|ZP_06052619.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Grimontia
hollisae CIP 101886]
gi|262221371|gb|EEY72685.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Grimontia
hollisae CIP 101886]
Length = 351
Score = 460 bits (1183), Expect = e-127, Method: Composition-based stats.
Identities = 140/364 (38%), Positives = 208/364 (57%), Gaps = 21/364 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP S IA P R ++RL+ ++ N +S +D+ + D +V
Sbjct: 1 MQVSDFHFDLPDSLIARYPQPDRTASRLLQLNGNTG---ELSHRQFTDILDLVEPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + R SK K G L
Sbjct: 58 FNNTRVIPARVYGRKAS-----GGKIEVLVERMLDEKTILAHVRSSKSPKPGTQLFLGEN 112
Query: 121 DGQSRLEATVIDKWNT-GEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
D EA ++ + + EI V + ++ ++ VG +PLPPYI RP + D
Sbjct: 113 D---EFEAEMVARHDALFEIRFVGEQAVLD---ILNQVGHMPLPPYI--DRPDEDSDKER 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y + G+VAAPTAGLHF N+L+ L G++ FVTLHVGAGTF PV+VE+ +DH+
Sbjct: 165 YQTVYNEKPGAVAAPTAGLHFDENILAALKEKGVQTAFVTLHVGAGTFQPVRVENINDHV 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNI 295
MH+E + A+ + K+RG R+++VGTTS+R LE+A E + P+ T I
Sbjct: 225 MHAEYAEVPQEVVDAVLATKARGNRVIAVGTTSVRSLESAAQHAKKEGTELQPFFDDTQI 284
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGY ++ VD L++NFHLP+STL+MLVS+F G + Y+ A+S+ YRF+SYGD
Sbjct: 285 FIYPGYEWQLVDALVTNFHLPESTLIMLVSSFAGYDHVMNAYKEAVSNEYRFFSYGDAMF 344
Query: 356 LFQK 359
+ ++
Sbjct: 345 VTRQ 348
>gi|300172986|ref|YP_003772152.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Leuconostoc
gasicomitatum LMG 18811]
gi|299887365|emb|CBL91333.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Leuconostoc
gasicomitatum LMG 18811]
Length = 353
Score = 460 bits (1183), Expect = e-127, Method: Composition-based stats.
Identities = 141/358 (39%), Positives = 209/358 (58%), Gaps = 13/358 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FD+DLP + IA P+ RDS+RL+V+ + + D D+ ++N DAIV
Sbjct: 8 QLADFDYDLPETLIAQTPLKQRDSSRLLVLDADTG---LYEDKHFYDILDYVNPGDAIVM 64
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NN++V+ A+L+GVR L + + W +P+K G + F +
Sbjct: 65 NNSRVLPARLHGVR----PETGGHAEVLLLRQDHGDVWETLVKPAKKSPVGSTIFFGNDI 120
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ ATV+ + G + F GI + +G +PLPPYI K D YQ
Sbjct: 121 DNPVMTATVVGELEHGGRYIEFHYEGI-FMELLEKLGEMPLPPYIKEKLA----DQERYQ 175
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T Y+K+ GS AAPTAGLH+T LL ++ + G++ +TLHVG GTF PV+ E+ +DH MH
Sbjct: 176 TVYSKVDGSAAAPTAGLHWTPELLDKVRAKGVQTIELTLHVGLGTFRPVEEENIEDHKMH 235
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPG 300
SE + + A ALN V + GGRI++ GTTS+R LET ++ +G + SG+T+IFI PG
Sbjct: 236 SEFYQLSSEAADALNKVHATGGRIIATGTTSIRTLETIGSKFNGQLQADSGWTDIFIKPG 295
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y++ VD ++NFHLPKSTL+MLV+AF G + YQHA++ YRF+S+GD + +
Sbjct: 296 YQWTTVDAFITNFHLPKSTLVMLVAAFTGRDNILNAYQHAVNDKYRFFSFGDAMFIKR 353
>gi|319936566|ref|ZP_08010980.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Coprobacillus sp. 29_1]
gi|319808364|gb|EFW04924.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Coprobacillus sp. 29_1]
Length = 341
Score = 460 bits (1183), Expect = e-127, Method: Composition-based stats.
Identities = 149/356 (41%), Positives = 198/356 (55%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EFD+ LP IA P+ RD++RLMV+ I D D+ +L D +V
Sbjct: 1 MKLSEFDYHLPEELIAQTPLKKRDTSRLMVLDRK---NETIEDKHFYDILDYLYEGDILV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L G + + L + + W ++++K I+ F
Sbjct: 58 RNNTKVIPARLYGTK----EETNGHVEVLLLKDLGNDVWECLVGNARIVKIDTIITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A I + G GI + +GT+PLPPYI K D Y
Sbjct: 111 -GDGSLKAKCIHIGDEGIRHFEMIYEGI-FYEILDTLGTMPLPPYIKEK----LEDQERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAKI+GS AAPTAGLHFT +++ ++ + G+K+ VTLHVG GTF PVKV+D +H M
Sbjct: 165 QTVYAKIEGSAAAPTAGLHFTDDIIDKVKAKGVKILDVTLHVGLGTFRPVKVDDVLEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ID AQ LN+ K+ G RI+SVGTTS R LE + G T+IFI PG
Sbjct: 225 HSEFYMIDEDVAQQLNNAKANGQRIISVGTTSTRTLEANFKKYGQFKATQESTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F A+D L++NFHLPKSTL+MLVSAF E K Y HA+ YRF+S+GD +
Sbjct: 285 YQFEAIDALITNFHLPKSTLVMLVSAFANKEFILKAYHHAVEEKYRFFSFGDCMFI 340
>gi|225852594|ref|YP_002732827.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
melitensis ATCC 23457]
gi|256263912|ref|ZP_05466444.1| queuosine biosynthesis protein [Brucella melitensis bv. 2 str.
63/9]
gi|254764268|sp|C0RJ65|QUEA_BRUMB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|225640959|gb|ACO00873.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
melitensis ATCC 23457]
gi|263094045|gb|EEZ17979.1| queuosine biosynthesis protein [Brucella melitensis bv. 2 str.
63/9]
gi|326409115|gb|ADZ66180.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
melitensis M28]
gi|326538822|gb|ADZ87037.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
melitensis M5-90]
Length = 363
Score = 460 bits (1183), Expect = e-127, Method: Composition-based stats.
Identities = 208/361 (57%), Positives = 256/361 (70%), Gaps = 9/361 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRPV PRD A+L+ V P D V DL L DA+V
Sbjct: 1 MRVDLFDFDLPEERIALRPVEPRDHAKLLHVRPG----EPFEDRHVYDLFDLLQPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R N + +S TLHMRV P+ W + RP+K +K+GD + F
Sbjct: 57 FNDTKVIPAQLEGMRERTGNISQ--VSATLHMRVGPDRWKAFLRPAKRVKEGDRIRFGHS 114
Query: 121 DGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+ATV +K ++GE LLVF +SG L+ I+ VG IPLPPYIA KRP D RD
Sbjct: 115 GTSCFLGTLDATVAEKGDSGEALLVFDLSGAVLDEAIAAVGHIPLPPYIASKRPEDERDR 174
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YA+ +G+VAAPTAGLHFT +LL ++ + GI+ +FVTLHVGAGTF+PVK +DT D
Sbjct: 175 KDYQTVYAREEGAVAAPTAGLHFTPDLLEKIKARGIEEHFVTLHVGAGTFLPVKADDTGD 234
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+EIG + TA ALN+V RGGRI+ VGTTSLRL+E+AT EDG++ PWSG T+IFI
Sbjct: 235 HKMHAEIGHVSQRTASALNAVHERGGRIICVGTTSLRLIESATGEDGVVRPWSGATDIFI 294
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFRAVD+LM+NFHLP+STL MLVSAF G++ Y +AI+ YRFYSYGD SLL
Sbjct: 295 TPGYRFRAVDLLMTNFHLPRSTLFMLVSAFSGLDTMHAAYNYAIADGYRFYSYGDASLLE 354
Query: 358 Q 358
+
Sbjct: 355 R 355
>gi|241895532|ref|ZP_04782828.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Weissella
paramesenteroides ATCC 33313]
gi|241871110|gb|EER74861.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Weissella
paramesenteroides ATCC 33313]
Length = 348
Score = 460 bits (1183), Expect = e-127, Method: Composition-based stats.
Identities = 144/355 (40%), Positives = 210/355 (59%), Gaps = 17/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FD++LP IA P+ RD +RL+ ++ + + D D+ +LN DA+V N
Sbjct: 8 LNDFDYELPHELIAQTPLERRDGSRLLELNADTG---ELHDRHFYDIIDYLNPGDALVMN 64
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
N++V+ A+L GVR + L + + W +P++ G + F G
Sbjct: 65 NSRVLPARLYGVR----PETGGHVEVLLLRQEKDDVWETLVKPARKYPVGQKIVF----G 116
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+L A VI++ G ++ F GI LE + +G +PLPPYI K D YQT
Sbjct: 117 DGQLTAEVIEELEHGGRMIKFHYDGIFLE-ILEELGEMPLPPYIKEKLA----DQERYQT 171
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
Y+K+ GS AAPTAGLH+T LL ++ GIK+ +TLHVG GTF PV+ ++ DDH MHS
Sbjct: 172 VYSKVNGSAAAPTAGLHWTPELLQKVADKGIKLVELTLHVGLGTFRPVEEDNIDDHKMHS 231
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + AQ LN V++ GGRIV+ GTTS+R LET + DG ++ SG+T+IFI PG+
Sbjct: 232 EFYQLSEEAAQTLNEVRANGGRIVATGTTSIRTLETIGAKFDGELHADSGWTDIFIKPGF 291
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+R VD ++NFHLPKSTL+MLV+AF G + Y+HA++ YRF+S+GD +
Sbjct: 292 EWRVVDAFITNFHLPKSTLVMLVAAFTGRDNILNAYKHAVAEKYRFFSFGDAMFI 346
>gi|304440234|ref|ZP_07400124.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Peptoniphilus duerdenii ATCC BAA-1640]
gi|304371283|gb|EFM24899.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Peptoniphilus duerdenii ATCC BAA-1640]
Length = 342
Score = 459 bits (1182), Expect = e-127, Method: Composition-based stats.
Identities = 146/356 (41%), Positives = 206/356 (57%), Gaps = 19/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +F +DLP IA P+ R S+RL++V+ N + + ++ +LN D +V
Sbjct: 3 LKTSDFYYDLPHELIAQHPLKDRASSRLLIVNRNSKD---LEECHFYNIIDYLNEGDVLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN++VI A+L G R +E++I L R ++W +P K K G + F
Sbjct: 60 VNNSRVIPARLFGHR----KDKEEKIEILLLKR-EEDTWQCLVKPGKKAKVGSEIIF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+L+ V G + F GI E + +G +PLPPYI K D Y
Sbjct: 112 --SDKLKCEVKRVDEEGNRYIKFHCDGI-FEEILDELGNMPLPPYITEK----LEDKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+KI GS AAPTAGLHFT +LL R+ GIKV +TLHVG GTF PVKV+D + H M
Sbjct: 165 QTVYSKIDGSAAAPTAGLHFTEDLLDRIKEKGIKVVPITLHVGLGTFRPVKVDDVEKHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D TA+ +N K G RI++VGTTS+R LET +G + SG+T+IFI PG
Sbjct: 225 HSEFYMMDKETAKIINDAKENGKRIIAVGTTSMRTLETI-GRNGRVKETSGWTDIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ F+ VD L++NFHLP+STL+MLVSAF + Y++AI + +RF+S+GD +
Sbjct: 284 FEFKIVDALITNFHLPESTLMMLVSAFASKDIIFNAYEYAIKNKFRFFSFGDAMFI 339
>gi|258645434|ref|ZP_05732903.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Dialister
invisus DSM 15470]
gi|260402785|gb|EEW96332.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Dialister
invisus DSM 15470]
Length = 339
Score = 459 bits (1182), Expect = e-127, Method: Composition-based stats.
Identities = 137/356 (38%), Positives = 195/356 (54%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++F++ LP IA +P PRDS RL++V D+ + D V
Sbjct: 1 MKLEDFNYVLPKELIAQQPAEPRDSCRLLMVDKKTGEW---QHRRFRDILDEIRPGDVFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L G R ++ L + W + P + G + F
Sbjct: 58 FNNTKVIPARLFGRR----KGTGGKVEALLLTPKGNDVWEILVNPGRKALPGQEIEF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
TVIDK G L+ F SG + + + +G +P PPYI +K Y
Sbjct: 111 --SENFSCTVIDKTEFGGRLVKFHYSG-DFDNWLDQLGEMPTPPYIHKKLENKDE----Y 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL ++ G ++ FVTLHVG GTF PV E+ +DH M
Sbjct: 164 QTVYAKFKGSAAAPTAGLHFTPELLEKMKDKGAELLFVTLHVGIGTFRPVAEENIEDHEM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I+ TAQ +N K G RI++VGTTS+R LE+A + G + S +T ++I PG
Sbjct: 224 HREWYTIEKETAQKVNEAKEEGRRIIAVGTTSVRTLESA-GQTGRVEAGSSWTQLYIYPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+++ VD +++NFHLP+STL+M++++F G E Y+ A+ YRF+S+GD L
Sbjct: 283 YQWQVVDAIVTNFHLPESTLIMMMASFAGREHILAAYEEAVRQKYRFFSFGDAMFL 338
>gi|148981302|ref|ZP_01816362.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrionales
bacterium SWAT-3]
gi|145960934|gb|EDK26262.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrionales
bacterium SWAT-3]
Length = 350
Score = 459 bits (1182), Expect = e-127, Method: Composition-based stats.
Identities = 140/363 (38%), Positives = 205/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N ++D D+ + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQEERTASRLLKLDGNNGN---LTDGSFKDVLDLVEPGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + S + R SK K G L
Sbjct: 58 FNNTRVIPARVFGRKAS-----GGKLEVLVERMLDEKSILAHVRCSKSPKPGTKLFLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D EA +I + + + + S + ++ VG +PLPPYI RP + D Y
Sbjct: 113 D---EYEAEMIARHDA--LFEIHFTSDQSVLEILNSVGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF L++ + + G++ +VTLHVGAGTF PVKV++ +DH M
Sbjct: 166 QTVYNEKPGAVAAPTAGLHFDDKLMADMKAKGVEFAYVTLHVGAGTFQPVKVDNINDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT---EDG-IINPWSGFTNIF 296
H+E + A+ + K+RGGRI++VGTTS+R LE+A ++G + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAVAATKARGGRIIAVGTTSVRSLESAAQDALKNGTELVPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY ++ VD L++NFHLP+STL+MLVSAF G + Y HA+ YRF+SYGD +
Sbjct: 286 IFPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYDNVMGAYDHAVKSEYRFFSYGDAMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 NKK 348
>gi|71281922|ref|YP_267862.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Colwellia
psychrerythraea 34H]
gi|91207419|sp|Q487A3|QUEA_COLP3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|71147662|gb|AAZ28135.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Colwellia
psychrerythraea 34H]
Length = 359
Score = 459 bits (1182), Expect = e-127, Method: Composition-based stats.
Identities = 149/364 (40%), Positives = 218/364 (59%), Gaps = 16/364 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP + IA P R ++RLM ++ N I+D + +D+ A LNS D +V
Sbjct: 1 MRVSDFSFDLPEALIARYPKAERTASRLMTLNGNSGA---ITDGVFTDIVAQLNSGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + N+ + R SK K G+ L ++
Sbjct: 58 FNNTRVIPARMFGQKAS-----GGKIEVLVERVIDQNTALAHIRASKSPKVGNELFLGNE 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D +++AT++ + G + + S + + +G +PLPPYI RP + D Y
Sbjct: 113 DSDVKVKATMVARH--GALFELKFNSDESVLTILDKIGHMPLPPYI--DRPDEDSDKERY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL R+ + G+++ FVTLHVGAGTF PVKV++ DHIM
Sbjct: 169 QTVYNEKPGAVAAPTAGLHFDEALLERIKAKGVELAFVTLHVGAGTFQPVKVDEIADHIM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT----TEDGIINPWSGFTNIF 296
H+E + + K+ GGR+V+VGTTS+R LE+A ++ ++ + G T+IF
Sbjct: 229 HAEYVEVSDEVVAQIAKTKAAGGRVVAVGTTSVRSLESAAKAALDKNKPLSAFYGDTDIF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPG +F+ +D L++NFHL +STLLMLVSAF G + YQHAIS YRF+SYGD L
Sbjct: 289 ITPGCQFQIIDALVTNFHLSESTLLMLVSAFSGYDHIMSAYQHAISQEYRFFSYGDAMFL 348
Query: 357 FQKR 360
++
Sbjct: 349 TKQE 352
>gi|325567162|ref|ZP_08143829.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus casseliflavus ATCC 12755]
gi|325158595|gb|EGC70741.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus casseliflavus ATCC 12755]
Length = 343
Score = 459 bits (1182), Expect = e-127, Method: Composition-based stats.
Identities = 152/357 (42%), Positives = 210/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++FDF+LP IA P+ R S+RL+VV D ++ L DA+V
Sbjct: 2 LTTEDFDFELPEELIAQTPLSDRSSSRLLVVDRETGK---FEDKHFYNIIDELEPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A++ G + + L + ++W +P+K K G + F
Sbjct: 59 MNDTRVLPARIYGEK----QETGAHLEILLLNNIEGDTWETLIKPAKRAKVGTKITF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RLEA V ++ + G ++ F GI LE + +G +PLPPYI + D Y
Sbjct: 112 -GDGRLEAVVEEELDHGGRIIRFQYKGIFLE-ILESLGEMPLPPYIKER----LEDPDRY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ DH M
Sbjct: 166 QTVYAKENGSAAAPTAGLHFTPELLEQIAAKGVKLVYLTLHVGLGTFRPVSVDNIADHEM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A LN V++ GG+IV+VGTTS+R LET T+ DG I SG+T+IFITP
Sbjct: 226 HSEFYRLTEEAAAQLNEVRANGGKIVAVGTTSIRTLETIGTKFDGQIKADSGWTSIFITP 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ V+ +NFHLPKSTL+MLVSAF G + T YQHAI YRF+S+GD L
Sbjct: 286 GYQFKIVEAFSTNFHLPKSTLVMLVSAFAGRDLTLSAYQHAIDERYRFFSFGDAMFL 342
>gi|15675321|ref|NP_269495.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes M1 GAS]
gi|71910953|ref|YP_282503.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS5005]
gi|21263910|sp|Q99Z49|QUEA_STRP1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|13622501|gb|AAK34216.1| putative S-adenosylmethionine-tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes M1 GAS]
gi|71853735|gb|AAZ51758.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes MGAS5005]
Length = 342
Score = 459 bits (1182), Expect = e-127, Method: Composition-based stats.
Identities = 154/357 (43%), Positives = 212/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M FDF+LP IA P+ RDS++L+++ + D + LN DA+V
Sbjct: 1 MNTNNFDFELPEELIAQTPLEKRDSSKLLIIDHR---QKTMVDSHFDHIIDQLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K +K G ++F
Sbjct: 58 MNNTRVLPARLYGEK----PDTHGHVELLLLKNTQGDQWEVLAKPAKRLKVGSQVNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+AT+ID+ G ++ FS GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLKATIIDELEHGGRIVEFSYDGIFLE-VLESLGEMPLPPYIHEK----LEDAERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT++LL ++ + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTTDLLKKIEAKGVHLVYLTLHVGLGTFRPVSVDNLDEHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK GGR+V+VGTTS+R LET + G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRDVKQAGGRVVAVGTTSIRTLETIGGKFQGDIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ VD +NFHLPKSTL+MLVSAF G + + Y+HA+ YRF+S+GD +
Sbjct: 285 GYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYRHAVDEKYRFFSFGDAMFV 341
>gi|281492155|ref|YP_003354135.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Lactococcus
lactis subsp. lactis KF147]
gi|281375826|gb|ADA65320.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Lactococcus
lactis subsp. lactis KF147]
Length = 345
Score = 459 bits (1181), Expect = e-127, Method: Composition-based stats.
Identities = 148/361 (40%), Positives = 212/361 (58%), Gaps = 17/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA P+ R +RL+++ P + D ++ L + DA+V
Sbjct: 1 MNINDFDFDLPEELIAQTPLEKRSESRLLILDPKT---EELEDRHFYNIIDELETGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L+G R I L + N W A+P++ +K G+ + F
Sbjct: 58 LNNTRVLPARLHGERA----ETGGHIELLLLKDMGQNRWETLAKPARKMKVGEEVVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A V++ + G ++ F +GI LE + +G +PLPPYI + D Y
Sbjct: 111 -GDGRLKAVVVEVLDHGGRIVEFKYNGIFLE-ILESLGEMPLPPYIHEQ----LEDQERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +AK GS AAPTAGLH+T LL ++ G+K+ +TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVFAKENGSAAAPTAGLHYTPELLEKIADKGVKIVELTLHVGLGTFRPVSVDNVDEHQM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L +VK+ G +IV+ GTTS+R LET ++ DG I SG+T+IFI P
Sbjct: 225 HSEFYRLTEEAAAQLRAVKASGHKIVASGTTSIRTLETIGSKFDGDIQADSGWTDIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY ++ VD +NFHLPKSTL+MLV+AF G + YQHAI YRF+S+GD + K
Sbjct: 285 GYEWKVVDAFNTNFHLPKSTLVMLVAAFAGRDFVLDAYQHAIDEKYRFFSFGDAMFVRPK 344
Query: 360 R 360
+
Sbjct: 345 K 345
>gi|257866741|ref|ZP_05646394.1| queuosine biosynthesis protein [Enterococcus casseliflavus EC30]
gi|257872742|ref|ZP_05652395.1| queuosine biosynthesis protein [Enterococcus casseliflavus EC10]
gi|257800699|gb|EEV29727.1| queuosine biosynthesis protein [Enterococcus casseliflavus EC30]
gi|257806906|gb|EEV35728.1| queuosine biosynthesis protein [Enterococcus casseliflavus EC10]
Length = 343
Score = 459 bits (1181), Expect = e-127, Method: Composition-based stats.
Identities = 153/357 (42%), Positives = 210/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++FDFDLP IA P+ R S+RL+VV D ++ L DA+V
Sbjct: 2 LTTEDFDFDLPEELIAQTPLSDRSSSRLLVVDRETGK---FEDKHFYNIIDELAPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A++ G + + L + ++W +P+K K G + F
Sbjct: 59 MNDTRVLPARIYGEK----QETGAHLEILLLNNIEGDTWETLIKPAKRAKVGTKITF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RLEA V ++ + G ++ F GI LE + +G +PLPPYI + D Y
Sbjct: 112 -GDGRLEAVVEEELDHGGRIIRFQYKGIFLE-ILESLGEMPLPPYIKER----LEDPDRY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ DH M
Sbjct: 166 QTVYAKENGSAAAPTAGLHFTPELLEQIAAKGVKLVYLTLHVGLGTFRPVSVDNIADHEM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A LN V++ GG+IV+VGTTS+R LET T+ DG I SG+T+IFITP
Sbjct: 226 HSEFYRLTEEAAAQLNEVRANGGKIVAVGTTSIRTLETIGTKFDGQIKADSGWTSIFITP 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ V+ +NFHLPKSTL+MLVSAF G + T YQHAI YRF+S+GD L
Sbjct: 286 GYQFKIVEAFSTNFHLPKSTLVMLVSAFAGRDLTLSAYQHAIDERYRFFSFGDAMFL 342
>gi|322412116|gb|EFY03024.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus dysgalactiae subsp. dysgalactiae ATCC
27957]
Length = 342
Score = 459 bits (1181), Expect = e-127, Method: Composition-based stats.
Identities = 156/357 (43%), Positives = 212/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RDS++L+++ + D + LN DA+V
Sbjct: 1 MNTNDFDFDLPEELIAQTPLEKRDSSKLLIIDHE---QKTMIDSHFDHIIDQLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLYGEKL----DTHGHVELLLLKNTHGDQWEVLAKPAKRLKVGSQVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL AT++++ G ++ F+ GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATIVEELEHGGRIVEFNYEGIFLE-VLESLGEMPLPPYIHEKLD----DAERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT++LLS++ + G+ + ++TLHVG GTF PV VE+ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTTDLLSKIEAKGVHLVYLTLHVGLGTFRPVSVENLDDHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK GGRIV+VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRDVKQAGGRIVAVGTTSIRTLETIGSKFQGDIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ VD +NFHLPKSTL+MLVSAF G + Y+HA+ YRF+S+GD +
Sbjct: 285 GYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLDAYKHAVDEKYRFFSFGDAMFV 341
>gi|299535652|ref|ZP_07048973.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lysinibacillus fusiformis ZC1]
gi|298728852|gb|EFI69406.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lysinibacillus fusiformis ZC1]
Length = 346
Score = 459 bits (1181), Expect = e-127, Method: Composition-based stats.
Identities = 143/362 (39%), Positives = 205/362 (56%), Gaps = 18/362 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDF+LP IA P+ R ++RLMVV P + H + + L++ D +V
Sbjct: 1 MRVEDFDFELPEELIAQTPLVDRTASRLMVVTPGS---NKVEHHHFAHVLDELHAGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP-NSWSVYARPSKVIKKGDILHFFS 119
N+T+V+ A+L GV+ I L +++ + W +P+K +K G ++ F
Sbjct: 58 LNDTRVLPARLMGVK----EETGAHIEVLLLKQMAGTDEWETLVKPAKRVKVGTVITF-- 111
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G L AT + G F GI + +G +PLPPYI K D
Sbjct: 112 --GDGLLTATCTGELEHGGRTFEFQYDGI-FYEILEQLGEMPLPPYIREK----LEDKDR 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK +GS AAPTAGLHFT LL+++ + G++V F+TLHVG GTF PV V+ ++H
Sbjct: 165 YQTVYAKERGSAAAPTAGLHFTEELLAQVKAKGVEVVFITLHVGLGTFRPVSVDSIENHE 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFIT 298
MH+E + A +N VK GG++++VGTTS R LET ++ +G + G+T+IFI
Sbjct: 225 MHAEFYSVSEQAAHTINRVKRNGGKVIAVGTTSTRTLETIGSKYEGEVRAEQGWTSIFIY 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY F VD L++NFHLPKSTL+MLVS E YQ A+ YRF+S+GD +
Sbjct: 285 PGYNFTVVDGLITNFHLPKSTLVMLVSTLATRETILSAYQQAVEERYRFFSFGDAMFIRP 344
Query: 359 KR 360
K+
Sbjct: 345 KK 346
>gi|145628563|ref|ZP_01784363.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae 22.1-21]
gi|144979033|gb|EDJ88719.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae 22.1-21]
Length = 357
Score = 459 bits (1181), Expect = e-127, Method: Composition-based stats.
Identities = 141/366 (38%), Positives = 205/366 (56%), Gaps = 17/366 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDFDLP IA P R S RL+ ++ I SD+ ++ D ++
Sbjct: 1 MRVSDFDFDLPDELIARYPKTDRVSCRLLQLNGENG---EIFHRTFSDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKIEVLVERMLDEHRFLAHIRSSKSPKEGTELFLGED 112
Query: 121 D-GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G++ V+ ++ + S L + +G +PLPPYI RP + D
Sbjct: 113 KLGENNGIKVVMKARHSSLFEVELSDKSTALLDVLQTIGHMPLPPYI--DRPDEEADQEC 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y+K+ G+VAAPTAGLHF NLL +L + G+ FVTLHVGAGTF PV+VE+ +DH+
Sbjct: 171 YQTVYSKVPGAVAAPTAGLHFDENLLEKLKAKGVNFEFVTLHVGAGTFQPVRVENIEDHV 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT------TEDGIINPWSGFT 293
MH+E + A+ + K G R+++VGTTS+R +E+A +I P+ T
Sbjct: 231 MHAEYVEVSQEVCNAIIATKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSDT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + T Y+HA+ YRF+SYGD
Sbjct: 291 SIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKHAVKEKYRFFSYGDA 350
Query: 354 SLLFQK 359
+ +K
Sbjct: 351 MFINKK 356
>gi|315658090|ref|ZP_07910962.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus lugdunensis M23590]
gi|315496419|gb|EFU84742.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus lugdunensis M23590]
Length = 341
Score = 459 bits (1181), Expect = e-127, Method: Composition-based stats.
Identities = 145/357 (40%), Positives = 212/357 (59%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++FD+ LP S IA P+ RD +RL+V++ + D+ +LN D +V
Sbjct: 1 MNIEDFDYHLPESLIAQTPLKNRDQSRLLVLNKKTGD---MKHQHFKDVINYLNPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L GV+ ++ + ++ N W V +P+K IK G+ L F
Sbjct: 58 LNDTRVMPARLFGVK----EETGAKVEMLMLTQIENNDWEVLLKPAKRIKVGNQLSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ ++ A I + + G ++ GI L+ ++ +G +PLPPYI + D Y
Sbjct: 111 -GEGKIIAECIKELDQGGRIMRLHYEGI-LQERLDELGEMPLPPYIKARLD----DPDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT NLL + + G+ + F+TLHVG GTF PV VE+ ++H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTDNLLKDIKAKGVNIAFITLHVGLGTFRPVSVENINEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TAQ LN+ K +G RI++VGTTS R LET + SG+T+IFI PG
Sbjct: 225 HSEYYQMTENTAQLLNNTKLQGHRIIAVGTTSTRTLETIRRDHSQFIATSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+A+D L++NFHLPKSTL+MLVSAF + Y+ A+ YRF+S+GD L+
Sbjct: 285 FEFKAIDALITNFHLPKSTLVMLVSAFSSRQFILTAYRKAVELEYRFFSFGDAMLII 341
>gi|257870720|ref|ZP_05650373.1| queuosine biosynthesis protein [Enterococcus gallinarum EG2]
gi|257804884|gb|EEV33706.1| queuosine biosynthesis protein [Enterococcus gallinarum EG2]
Length = 343
Score = 459 bits (1181), Expect = e-127, Method: Composition-based stats.
Identities = 155/357 (43%), Positives = 209/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++FDF+LP IA P+ R S+RL+VV + D D+ L DA+V
Sbjct: 2 LTTEDFDFELPEELIAQTPLSDRSSSRLLVVDRESGA---MEDKRFYDIIDELAPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A++ G + + L + +SW +P+K K G + F
Sbjct: 59 MNDTRVLPARIYGEKI----ETGAHLEILLLNNIEGDSWETLIKPAKRAKVGTKITF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RLEA V + G ++ FS GI LE + +G +PLPPYI + D Y
Sbjct: 112 -GDGRLEAVVEKELEHGGRIIRFSYDGIFLE-ILESLGEMPLPPYIKER----LEDPDRY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ G+K+ ++TLHVG GTF PV V++ DH M
Sbjct: 166 QTVYAKENGSAAAPTAGLHFTPELLKKIADKGVKLVYLTLHVGLGTFRPVSVDNIADHEM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A LN V++ GG+IV+VGTTS+R LET T+ DG I SG+T+IFITP
Sbjct: 226 HSEFYRLTEEAAAQLNDVRANGGKIVAVGTTSIRTLETIGTKFDGDIKADSGWTSIFITP 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ V +NFHLPKSTL+MLVSAF G + T + YQHAI YRF+S+GD L
Sbjct: 286 GYQFKVVQAFSTNFHLPKSTLVMLVSAFAGRDLTLEAYQHAIDERYRFFSFGDAMFL 342
>gi|227513119|ref|ZP_03943168.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus buchneri ATCC 11577]
gi|227083694|gb|EEI19006.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus buchneri ATCC 11577]
Length = 352
Score = 459 bits (1181), Expect = e-127, Method: Composition-based stats.
Identities = 144/356 (40%), Positives = 211/356 (59%), Gaps = 17/356 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+++FD+ LP IA P+ RD +RL+V++ + D ++ +LN DA+V
Sbjct: 12 TLEDFDYKLPHELIAQTPIKDRDESRLLVLNKETGD---MQDRRFYNIIDYLNPGDALVM 68
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N++KV+ A++ GV+ I L + N W +P+K K G ++ F
Sbjct: 69 NDSKVMPARIYGVK----KDTGAHIEVLLLHNIEGNRWETLMKPAKRAKVGTVIDF---- 120
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G+ +L+A V + + G + F GI +E + +G PLPPYI K D YQ
Sbjct: 121 GEGQLQAVVTKELDHGGREIEFKYEGIFIE-ILERLGETPLPPYIKEKLD----DPNRYQ 175
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YAK GS AAPTAGLH+T LL ++ G+ + ++TLHVG GTF PV+ ++ +DH MH
Sbjct: 176 TVYAKEMGSAAAPTAGLHWTKELLQKVADKGVHLVYLTLHVGLGTFRPVEEDNIEDHKMH 235
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPG 300
SE + ++ LN V+ GG+IV+ GTTS+R LET T+ +G I P SG+T+IFI PG
Sbjct: 236 SEFYRLSEEASKTLNDVRKNGGKIVATGTTSIRTLETVGTKFNGEIRPDSGWTDIFIKPG 295
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+++ VD ++NFHLPKSTL+MLV++F G E YQHAIS YRF+S+GD +
Sbjct: 296 YQWQVVDSFITNFHLPKSTLVMLVASFTGRENILNAYQHAISEKYRFFSFGDAMYI 351
>gi|290580879|ref|YP_003485271.1| putative S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Streptococcus mutans NN2025]
gi|254997778|dbj|BAH88379.1| putative S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Streptococcus mutans NN2025]
Length = 342
Score = 459 bits (1181), Expect = e-127, Method: Composition-based stats.
Identities = 154/357 (43%), Positives = 214/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF+LP + IA P+ RDS++L+VV + D + LN DA+V
Sbjct: 1 MNTSDFDFNLPEALIAQTPLKKRDSSKLLVVDHQKKT---MKDTHFDHIIDELNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G + + L + + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLHGEK----TVTHGHVELLLLKNIQGDQWEVLAKPAKRLKIGSHISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A + ++ N G ++ FS GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLKAIIKEELNHGGRIVEFSYEGIFLE-VLESLGEMPLPPYIHEK----LEDRDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LLS++ + G+K+ ++TLHVG GTF PV V++ ++H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLSKIEAKGVKLVYLTLHVGLGTFRPVSVDNVEEHQM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L +K+ GGRIV+VGTTS+R LET + G I SG+TNIFI P
Sbjct: 225 HSEFYSLSPEAAQTLKDIKANGGRIVAVGTTSIRTLETIGNKFAGQIEADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ VD +NFHLPKSTL+MLVSAF G + Y+HA+ YRF+S+GD +
Sbjct: 285 GYQFKIVDAFSTNFHLPKSTLVMLVSAFAGRDFILDAYKHAVDKHYRFFSFGDAMFV 341
>gi|322382936|ref|ZP_08056768.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase-like protein
[Paenibacillus larvae subsp. larvae B-3650]
gi|321153056|gb|EFX45514.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase-like protein
[Paenibacillus larvae subsp. larvae B-3650]
Length = 364
Score = 459 bits (1181), Expect = e-127, Method: Composition-based stats.
Identities = 147/373 (39%), Positives = 207/373 (55%), Gaps = 25/373 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V+ FDF+LP IA P+ R +RLM ++ I H DL +L + D +V
Sbjct: 1 MDVESFDFELPEELIAQTPLSDRTQSRLMTLNKETG---EIGHHTFKDLADYLKAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF-- 118
N+T+VI A+L G++ ++ L + N W RP K IK G L F
Sbjct: 58 LNDTRVIPARLFGLK----KDTGAKVELLLLKDLGDNRWEALVRPGKKIKTGAELVFGTQ 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
++ + L A V ++ G ++ FS GI + +G +PLPPYI + D
Sbjct: 114 AEADEPVLSAIVEEEGEMGARIVRFSYRGI-FNEILDRLGEMPLPPYIKEQ----LNDRE 168
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT +AK GS AAPTAGLHFT L L G+++ F+TLHVG GTF PV V+ +DH
Sbjct: 169 RYQTVFAKHAGSAAAPTAGLHFTEEFLEGLRGQGVRIAFITLHVGLGTFRPVSVDRVEDH 228
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-------DGI----IN 287
+H+E + TA+ +N +++GGR+++VGTTS R LETA DG ++
Sbjct: 229 NIHAEYYILSEETARLVNETRAQGGRVIAVGTTSARTLETAAGLSHSQGYIDGEGRTLLH 288
Query: 288 PWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
SG+T+IFI PGY FRAVD L++NFHLPKSTLLMLVSA + Y A+ + YRF
Sbjct: 289 ACSGWTSIFIYPGYEFRAVDGLLTNFHLPKSTLLMLVSALASRKYILHAYAEAVKNRYRF 348
Query: 348 YSYGDTSLLFQKR 360
+S+GD ++ +
Sbjct: 349 FSFGDAMFIYSNQ 361
>gi|257081115|ref|ZP_05575476.1| queuosine biosynthesis protein [Enterococcus faecalis E1Sol]
gi|257415434|ref|ZP_05592428.1| queuosine biosynthesis protein [Enterococcus faecalis AR01/DG]
gi|256989145|gb|EEU76447.1| queuosine biosynthesis protein [Enterococcus faecalis E1Sol]
gi|257157262|gb|EEU87222.1| queuosine biosynthesis protein [Enterococcus faecalis ARO1/DG]
Length = 343
Score = 459 bits (1181), Expect = e-127, Method: Composition-based stats.
Identities = 151/355 (42%), Positives = 208/355 (58%), Gaps = 17/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++FDFDLP IA P+ R S+RL+VV+ + D D+ L DA+V N
Sbjct: 4 TEDFDFDLPEELIAQTPLKDRASSRLLVVNKETGA---MEDKHFHDILDELQPGDALVMN 60
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NT+V+ A+L G + + L ++W +P+K K G + F G
Sbjct: 61 NTRVLPARLYGEK----PETGGHLEVLLLTNTEGDTWETLIKPAKRAKVGTEIQF----G 112
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
RL+A V ++ G ++ F GI LE + +G +PLPPYI + D YQT
Sbjct: 113 DGRLKAVVKEELEHGGRIIEFKYDGIFLE-ILESLGEMPLPPYIKERLD----DPDRYQT 167
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ GS AAPTAGLHFT LL + + G+ + ++TLHVG GTF PV V++ ++H MHS
Sbjct: 168 VYAEENGSAAAPTAGLHFTKELLEEIKAKGVHLVYLTLHVGLGTFRPVSVDNIEEHHMHS 227
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + A+ LN V+ GGRIV+VGTTS+R LET T+ +G I SG+T+IFITPGY
Sbjct: 228 EFYRLTEEAAKQLNEVRQAGGRIVAVGTTSIRTLETIGTKFNGEIQADSGWTDIFITPGY 287
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+F+ V+ +NFHLPKSTL+MLVSAF G + T YQHAI YRF+S+GD +
Sbjct: 288 QFKVVEAFSTNFHLPKSTLVMLVSAFAGKDLTLAAYQHAIEEKYRFFSFGDAMFI 342
>gi|242373940|ref|ZP_04819514.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus epidermidis M23864:W1]
gi|242348294|gb|EES39896.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus epidermidis M23864:W1]
Length = 347
Score = 458 bits (1180), Expect = e-127, Method: Composition-based stats.
Identities = 142/357 (39%), Positives = 210/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++EFD+ LP S IA P+ RD +RL+V+ ++ D+ +LN D +V
Sbjct: 7 LNIEEFDYHLPESLIAQTPLKNRDQSRLLVLQRETG---EMAHLHFKDVIDYLNPGDTLV 63
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L F
Sbjct: 64 LNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNRLSF--- 116
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++ A + + G ++ GI L+ ++ +G +PLPPYI + D Y
Sbjct: 117 -GDGKIVAECVKELEQGGRIMRLHYEGI-LQERLDELGEMPLPPYIKERLD----DPDRY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+ + F+TLHVG GTF PV V++ DDH M
Sbjct: 171 QTVYAKESGSAAAPTAGLHFTEALLDQIKAKGVNITFITLHVGLGTFRPVSVDNIDDHEM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + TA+ LN ++ G RI+SVGTTS R LET + SG+T+IFI PG
Sbjct: 231 HSEYYQMTSETAELLNQTRANGNRIISVGTTSTRTLETIRRDHEQFVEKSGWTDIFIYPG 290
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ ++A+D L++NFHLPKSTL+MLVSAF + YQ A+ YRF+S+GD L+
Sbjct: 291 FEYKAIDGLITNFHLPKSTLVMLVSAFSTRDNILNAYQTAVEMKYRFFSFGDAMLII 347
>gi|283470916|emb|CAQ50127.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus ST398]
Length = 341
Score = 458 bits (1180), Expect = e-127, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 209/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EFD+DLP S IA P+ RD +RL+V+ + D+ + D +V
Sbjct: 1 MNIEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETG---EMKHLHFKDIIEYFRPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 58 LNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI + D Y
Sbjct: 111 -GNGKIIAECIKEMDQGGRIMRLHYEGI-LQERLDELGEMPLPPYIKERLD----DPDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + FVTLHVG GTF PV V+D +DH M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTDELLTEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN KS+G RI+SVGTTS R LET + SG+TNIFI PG
Sbjct: 225 HSEYYQMTQETADLLNDTKSKGHRIISVGTTSTRTLETIRRDHDKFVETSGWTNIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 285 FDFKAIDGQITNFHLPKSTLVMLVSAFSNRENVLNAYKTAVNLEYRFFSFGDAMLII 341
>gi|228993157|ref|ZP_04153079.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
pseudomycoides DSM 12442]
gi|228999207|ref|ZP_04158788.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
mycoides Rock3-17]
gi|228760552|gb|EEM09517.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
mycoides Rock3-17]
gi|228766616|gb|EEM15257.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
pseudomycoides DSM 12442]
Length = 350
Score = 458 bits (1180), Expect = e-127, Method: Composition-based stats.
Identities = 151/357 (42%), Positives = 205/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQTPLEQRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G I+ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEDGDKWETLVKPAKRVKEGTIISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT I + G L FS GI + +G +PLPPYI D Y
Sbjct: 111 -GEGKLKATCIGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKE----TLEDRDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+ + F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKKKGVHLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETADLLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCATSGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF E Y A+ YRF+S+GD +
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFASRENVLHAYNEAVKEKYRFFSFGDAMFV 341
>gi|229006754|ref|ZP_04164388.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
mycoides Rock1-4]
gi|228754615|gb|EEM04026.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
mycoides Rock1-4]
Length = 350
Score = 458 bits (1180), Expect = e-127, Method: Composition-based stats.
Identities = 151/357 (42%), Positives = 204/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQTPLEQRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G I+ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEDGDKWETLVKPAKRVKEGTIISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT I + G L FS GI + +G +PLPPYI D Y
Sbjct: 111 -GEGKLKATCIGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKE----TLEDRDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL L G+ + F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEELKKKGVHLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETADLLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCATSGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF E Y A+ YRF+S+GD +
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFASRENVLHAYNEAVKEKYRFFSFGDAMFV 341
>gi|323127653|gb|ADX24950.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus dysgalactiae subsp. equisimilis ATCC
12394]
Length = 342
Score = 458 bits (1180), Expect = e-127, Method: Composition-based stats.
Identities = 155/357 (43%), Positives = 212/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RDS++L+++ + D + LN DA+V
Sbjct: 1 MNTNDFDFDLPEELIAQTPLEKRDSSKLLIIDHE---QKTMIDSHFDHIIDQLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLYGEK----PDTHGHVELLLLKNTHGDQWEVLAKPAKRLKVGSQVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL AT++++ G ++ F+ GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATIVEELEHGGRIVEFNYEGIFLE-VLESLGEMPLPPYIHEKLD----DAERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT+NLLS++ + G+ + ++TLHVG GTF PV V++ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTTNLLSKIEAKGVHLVYLTLHVGLGTFRPVSVDNLDDHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK GGR+V+VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRDVKKAGGRVVAVGTTSIRTLETIGSKFQGDIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ VD +NFHLPKSTL+MLVSAF G + Y+HA+ YRF+S+GD +
Sbjct: 285 GYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLDAYKHAVDEKYRFFSFGDAMFV 341
>gi|227822132|ref|YP_002826103.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sinorhizobium fredii NGR234]
gi|227341132|gb|ACP25350.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sinorhizobium fredii NGR234]
Length = 366
Score = 458 bits (1180), Expect = e-127, Method: Composition-based stats.
Identities = 217/362 (59%), Positives = 263/362 (72%), Gaps = 6/362 (1%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP + IALRP PRDSAR++VV P +SD V DLP+FL+ DA+V
Sbjct: 6 MRVDLFDFDLPETSIALRPASPRDSARMLVVRPQR--EPALSDFGVLDLPSFLSPGDALV 63
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R ++S TLHMRV+P+ W +ARP++ +K GD + F
Sbjct: 64 FNDTKVIPAQLEGIRRRG-EDVATQVSLTLHMRVAPDRWKAFARPARRLKPGDRISFGHG 122
Query: 121 DGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+ATV +K GE+ L F +SG L+ I VG IPLPPYIA KR DARD
Sbjct: 123 GNACLLGSLDATVEEKGEAGEVTLRFELSGPVLDEAIMSVGHIPLPPYIASKRSEDARDR 182
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YA+ +G+VAAPTAGLHFT L +L GI+ +FVTLHVGAGTF+PVK +DTDD
Sbjct: 183 ADYQTVYAREEGAVAAPTAGLHFTDRLFGKLDEAGIERHFVTLHVGAGTFLPVKADDTDD 242
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H+MH EIG +DA TA+ LN+V++RGGRIV VGTTSLRL+E+A TEDG I+PWSG T IFI
Sbjct: 243 HVMHEEIGHVDAVTAEKLNAVRARGGRIVCVGTTSLRLIESAATEDGKIHPWSGTTGIFI 302
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFRAVD+LM+NFHLPKSTL MLVSAF G+E + Y HAI+ YRFYSYGD SLLF
Sbjct: 303 TPGYRFRAVDMLMTNFHLPKSTLFMLVSAFAGLETMRGAYTHAIAAGYRFYSYGDASLLF 362
Query: 358 QK 359
+K
Sbjct: 363 RK 364
>gi|29375455|ref|NP_814609.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis V583]
gi|227520114|ref|ZP_03950163.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0104]
gi|227554979|ref|ZP_03985026.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis HH22]
gi|229546713|ref|ZP_04435438.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX1322]
gi|229548806|ref|ZP_04437531.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis ATCC 29200]
gi|255971322|ref|ZP_05421908.1| queuosine biosynthesis protein [Enterococcus faecalis T1]
gi|255973941|ref|ZP_05424527.1| queuosine biosynthesis protein [Enterococcus faecalis T2]
gi|256617740|ref|ZP_05474586.1| queuosine biosynthesis protein [Enterococcus faecalis ATCC 4200]
gi|256761626|ref|ZP_05502206.1| queuosine biosynthesis protein [Enterococcus faecalis T3]
gi|256854284|ref|ZP_05559648.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis T8]
gi|256957271|ref|ZP_05561442.1| queuosine biosynthesis protein [Enterococcus faecalis DS5]
gi|256959995|ref|ZP_05564166.1| queuosine biosynthesis protein [Enterococcus faecalis Merz96]
gi|256964309|ref|ZP_05568480.1| queuosine biosynthesis protein [Enterococcus faecalis HIP11704]
gi|257077755|ref|ZP_05572116.1| queuosine biosynthesis protein [Enterococcus faecalis JH1]
gi|257083784|ref|ZP_05578145.1| queuosine biosynthesis protein [Enterococcus faecalis Fly1]
gi|257086209|ref|ZP_05580570.1| queuosine biosynthesis protein [Enterococcus faecalis D6]
gi|257089281|ref|ZP_05583642.1| queuosine biosynthesis protein [Enterococcus faecalis CH188]
gi|257418465|ref|ZP_05595459.1| queuosine biosynthesis protein [Enterococcus faecalis T11]
gi|257421116|ref|ZP_05598106.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis X98]
gi|293383747|ref|ZP_06629654.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis R712]
gi|293388778|ref|ZP_06633271.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis S613]
gi|294781281|ref|ZP_06746627.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis PC1.1]
gi|307267946|ref|ZP_07549334.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX4248]
gi|307271868|ref|ZP_07553136.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0855]
gi|307277297|ref|ZP_07558399.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX2134]
gi|307278436|ref|ZP_07559511.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0860]
gi|307286677|ref|ZP_07566763.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0109]
gi|307292452|ref|ZP_07572306.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0411]
gi|312904428|ref|ZP_07763588.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0635]
gi|312907038|ref|ZP_07766034.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis DAPTO 512]
gi|312952863|ref|ZP_07771724.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0102]
gi|312978705|ref|ZP_07790432.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis DAPTO 516]
gi|46576997|sp|Q837H2|QUEA_ENTFA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|29342915|gb|AAO80679.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis V583]
gi|227072458|gb|EEI10421.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0104]
gi|227175888|gb|EEI56860.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis HH22]
gi|229306035|gb|EEN72031.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis ATCC 29200]
gi|229308173|gb|EEN74160.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX1322]
gi|255962340|gb|EET94816.1| queuosine biosynthesis protein [Enterococcus faecalis T1]
gi|255966813|gb|EET97435.1| queuosine biosynthesis protein [Enterococcus faecalis T2]
gi|256597267|gb|EEU16443.1| queuosine biosynthesis protein [Enterococcus faecalis ATCC 4200]
gi|256682877|gb|EEU22572.1| queuosine biosynthesis protein [Enterococcus faecalis T3]
gi|256709844|gb|EEU24888.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis T8]
gi|256947767|gb|EEU64399.1| queuosine biosynthesis protein [Enterococcus faecalis DS5]
gi|256950491|gb|EEU67123.1| queuosine biosynthesis protein [Enterococcus faecalis Merz96]
gi|256954805|gb|EEU71437.1| queuosine biosynthesis protein [Enterococcus faecalis HIP11704]
gi|256985785|gb|EEU73087.1| queuosine biosynthesis protein [Enterococcus faecalis JH1]
gi|256991814|gb|EEU79116.1| queuosine biosynthesis protein [Enterococcus faecalis Fly1]
gi|256994239|gb|EEU81541.1| queuosine biosynthesis protein [Enterococcus faecalis D6]
gi|256998093|gb|EEU84613.1| queuosine biosynthesis protein [Enterococcus faecalis CH188]
gi|257160293|gb|EEU90253.1| queuosine biosynthesis protein [Enterococcus faecalis T11]
gi|257162940|gb|EEU92900.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis X98]
gi|291078823|gb|EFE16187.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis R712]
gi|291081935|gb|EFE18898.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis S613]
gi|294451617|gb|EFG20073.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis PC1.1]
gi|295113928|emb|CBL32565.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Enterococcus sp. 7L76]
gi|306496483|gb|EFM66046.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0411]
gi|306502155|gb|EFM71439.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0109]
gi|306504942|gb|EFM74137.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0860]
gi|306506004|gb|EFM75172.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX2134]
gi|306511374|gb|EFM80376.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0855]
gi|306515587|gb|EFM84114.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX4248]
gi|310627023|gb|EFQ10306.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis DAPTO 512]
gi|310629166|gb|EFQ12449.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0102]
gi|310632255|gb|EFQ15538.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0635]
gi|311288412|gb|EFQ66968.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis DAPTO 516]
gi|315027055|gb|EFT38987.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX2137]
gi|315029030|gb|EFT40962.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX4000]
gi|315032349|gb|EFT44281.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0017]
gi|315034393|gb|EFT46325.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0027]
gi|315148027|gb|EFT92043.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX4244]
gi|315149629|gb|EFT93645.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0012]
gi|315153155|gb|EFT97171.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0031]
gi|315155173|gb|EFT99189.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0043]
gi|315157708|gb|EFU01725.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0312]
gi|315165057|gb|EFU09074.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX1302]
gi|315167869|gb|EFU11886.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX1341]
gi|315171772|gb|EFU15789.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX1342]
gi|315174888|gb|EFU18905.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX1346]
gi|315574093|gb|EFU86284.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0309B]
gi|315577222|gb|EFU89413.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0630]
gi|315581758|gb|EFU93949.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0309A]
gi|323480051|gb|ADX79490.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis 62]
gi|327534451|gb|AEA93285.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis OG1RF]
Length = 343
Score = 458 bits (1180), Expect = e-127, Method: Composition-based stats.
Identities = 151/355 (42%), Positives = 208/355 (58%), Gaps = 17/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++FDFDLP IA P+ R S+RL+VV+ + D D+ L DA+V N
Sbjct: 4 TEDFDFDLPEELIAQTPLKDRASSRLLVVNKETGD---MEDKHFHDILDELQPGDALVMN 60
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NT+V+ A+L G + + L ++W +P+K K G + F G
Sbjct: 61 NTRVLPARLYGEK----PETGGHLEVLLLTNTEGDTWETLIKPAKRAKVGTEIQF----G 112
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
RL+A V ++ G ++ F GI LE + +G +PLPPYI + D YQT
Sbjct: 113 DGRLKAVVKEELEHGGRIIEFKYDGIFLE-ILESLGEMPLPPYIKERLD----DPDRYQT 167
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ GS AAPTAGLHFT LL + + G+ + ++TLHVG GTF PV V++ ++H MHS
Sbjct: 168 VYAEENGSAAAPTAGLHFTKELLEEIKAKGVHLVYLTLHVGLGTFRPVSVDNIEEHHMHS 227
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + A+ LN V+ GGRIV+VGTTS+R LET T+ +G I SG+T+IFITPGY
Sbjct: 228 EFYRLTEEAAKQLNEVRQAGGRIVAVGTTSIRTLETIGTKFNGEIQADSGWTDIFITPGY 287
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+F+ V+ +NFHLPKSTL+MLVSAF G + T YQHAI YRF+S+GD +
Sbjct: 288 QFKVVEAFSTNFHLPKSTLVMLVSAFAGKDLTLAAYQHAIEEKYRFFSFGDAMFI 342
>gi|127513266|ref|YP_001094463.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Shewanella
loihica PV-4]
gi|166216753|sp|A3QFF6|QUEA_SHELP RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|126638561|gb|ABO24204.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Shewanella
loihica PV-4]
Length = 345
Score = 458 bits (1180), Expect = e-127, Method: Composition-based stats.
Identities = 143/360 (39%), Positives = 207/360 (57%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R ++RL+ + N ++D +D+ +N D +V
Sbjct: 1 MRVADFSFDLPDELIARYPMPNRTASRLLTLDGNSGA---VADKQFTDILEMVNPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + + ++ + + + R SK K G I+
Sbjct: 58 FNNTRVIPARVFGQK-----QTGGKLEILVERMLDDKRILAHVRSSKSPKPGTIICL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
E T++ + +T L + S S + + VG +PLPPYI RP + D Y
Sbjct: 110 --DGGYEMTMLARHDTLFELELNSES--TILEVLEEVGHMPLPPYI--DRPDEDADKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL+ L G+ V FVTLHVGAGTF PV+V+ DH M
Sbjct: 164 QTVYNQNPGAVAAPTAGLHFDDALLAALKEKGVNVAFVTLHVGAGTFQPVRVDSILDHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFITP 299
HSE + ++ + K+ G R+++VGTTS+R LE+A +G + +S T+IFI P
Sbjct: 224 HSEWAEVPQDVVDSIKATKAAGNRVIAVGTTSVRSLESAAKASEGELQAYSNDTDIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY F+ VD +++NFHLP+STL+ML+SAF G +E K YQHAI+ YRF+SYGD + +K
Sbjct: 284 GYEFQVVDAMVTNFHLPESTLIMLISAFAGFDEVKNAYQHAIAQKYRFFSYGDAMFVTKK 343
>gi|257876333|ref|ZP_05655986.1| queuosine biosynthesis protein [Enterococcus casseliflavus EC20]
gi|257810499|gb|EEV39319.1| queuosine biosynthesis protein [Enterococcus casseliflavus EC20]
Length = 343
Score = 458 bits (1179), Expect = e-127, Method: Composition-based stats.
Identities = 152/357 (42%), Positives = 210/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++FDF+LP IA P+ R S+RL+VV D ++ L DA+V
Sbjct: 2 LTTEDFDFELPEELIAQTPLSDRSSSRLLVVDRETGK---FEDKHFYNIIDELAPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A++ G + + L + ++W +P+K K G + F
Sbjct: 59 MNDTRVLPARIYGEK----QETGAHLEILLLNNIEGDTWETLIKPAKRAKVGTKITF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RLEA V ++ + G ++ F GI LE + +G +PLPPYI + D Y
Sbjct: 112 -GDGRLEAVVEEELDHGGRIIRFQYKGIFLE-ILESLGEMPLPPYIKER----LEDPDRY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ DH M
Sbjct: 166 QTVYAKENGSAAAPTAGLHFTPELLEQIAAKGVKLVYLTLHVGLGTFRPVSVDNIADHEM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A LN V++ GG+IV+VGTTS+R LET T+ DG I SG+T+IFITP
Sbjct: 226 HSEFYRLTEEAAAQLNEVRANGGKIVAVGTTSIRTLETIGTKFDGQIKADSGWTSIFITP 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ V+ +NFHLPKSTL+MLVSAF G + T YQHAI YRF+S+GD L
Sbjct: 286 GYQFKIVEAFSTNFHLPKSTLVMLVSAFAGRDLTLSAYQHAIDERYRFFSFGDAMFL 342
>gi|227510191|ref|ZP_03940240.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus brevis subsp. gravesensis ATCC 27305]
gi|227190396|gb|EEI70463.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus brevis subsp. gravesensis ATCC 27305]
Length = 352
Score = 458 bits (1179), Expect = e-127, Method: Composition-based stats.
Identities = 143/356 (40%), Positives = 211/356 (59%), Gaps = 17/356 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+++FD+ LP IA P+ RD +RL+V++ + D ++ +LN DA+V
Sbjct: 12 TLEDFDYKLPHELIAQTPIKDRDESRLLVLNKETGD---MQDRRFYNIIDYLNPGDALVM 68
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N++KV+ A++ GV+ I L + + W +P+K K G ++ F
Sbjct: 69 NDSKVMPARIYGVK----KDTGAHIEVLLLHNIDGDRWETLMKPAKRAKVGTVIDF---- 120
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G+ +L+A V + + G + F GI +E + +G PLPPYI K D YQ
Sbjct: 121 GEGQLQAVVTKELDHGGREIEFKYEGIFIE-ILERLGETPLPPYIKEKLD----DPNRYQ 175
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YAK GS AAPTAGLH+T LL ++ G+ + ++TLHVG GTF PV+ ++ +DH MH
Sbjct: 176 TVYAKEMGSAAAPTAGLHWTKELLQKVADKGVHLVYLTLHVGLGTFRPVEEDNIEDHKMH 235
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPG 300
SE + ++ LN V+ GG+IV+ GTTS+R LET T+ +G I P SG+T+IFI PG
Sbjct: 236 SEFYRLSEEASKTLNDVRKNGGKIVATGTTSIRTLETVGTKFNGEIRPDSGWTDIFIKPG 295
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+++ VD ++NFHLPKSTL+MLV++F G E YQHAIS YRF+S+GD +
Sbjct: 296 YQWQVVDSFITNFHLPKSTLVMLVASFTGRENILNAYQHAISEKYRFFSFGDAMYI 351
>gi|300859629|ref|ZP_07105717.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TUSoD Ef11]
gi|300850447|gb|EFK78196.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TUSoD Ef11]
gi|315145163|gb|EFT89179.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX2141]
gi|315163072|gb|EFU07089.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0645]
Length = 343
Score = 458 bits (1179), Expect = e-127, Method: Composition-based stats.
Identities = 151/355 (42%), Positives = 207/355 (58%), Gaps = 17/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++FDFDLP IA P+ R S+RL+VV+ D D+ L DA+V N
Sbjct: 4 TEDFDFDLPEELIAQTPLKDRASSRLLVVNKETGDT---EDKHFHDILDELQPGDALVMN 60
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NT+V+ A+L G + + L ++W +P+K K G + F G
Sbjct: 61 NTRVLPARLYGEK----PETGGHLEVLLLTNTEGDTWETLIKPAKRAKVGTEIQF----G 112
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
RL+A V ++ G ++ F GI LE + +G +PLPPYI + D YQT
Sbjct: 113 DGRLKAVVKEELEHGGRIIEFKYDGIFLE-ILESLGEMPLPPYIKERLD----DPDRYQT 167
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ GS AAPTAGLHFT LL + + G+ + ++TLHVG GTF PV V++ ++H MHS
Sbjct: 168 VYAEENGSAAAPTAGLHFTKELLEEIKAKGVHLVYLTLHVGLGTFRPVSVDNIEEHHMHS 227
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + A+ LN V+ GGRIV+VGTTS+R LET T+ +G I SG+T+IFITPGY
Sbjct: 228 EFYRLTEEAAKQLNEVRQAGGRIVAVGTTSIRTLETIGTKFNGEIQADSGWTDIFITPGY 287
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+F+ V+ +NFHLPKSTL+MLVSAF G + T YQHAI YRF+S+GD +
Sbjct: 288 QFKVVEAFSTNFHLPKSTLVMLVSAFAGKDLTLAAYQHAIEEKYRFFSFGDAMFI 342
>gi|312901590|ref|ZP_07760862.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0470]
gi|311291311|gb|EFQ69867.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX0470]
Length = 343
Score = 458 bits (1179), Expect = e-127, Method: Composition-based stats.
Identities = 150/355 (42%), Positives = 208/355 (58%), Gaps = 17/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++FDFDLP IA P+ R S+RL+VV+ + D D+ L DA+V N
Sbjct: 4 TEDFDFDLPEELIAQTPLKDRASSRLLVVNKETGD---MEDKHFHDILDELQPGDALVMN 60
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NT+V+ A+L G + + L ++W +P+K K G + F G
Sbjct: 61 NTRVLPARLYGEK----PETGGHLEVLLLTNTEGDTWETLIKPAKRAKVGTEIQF----G 112
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
RL+A V ++ G ++ F GI LE + +G +PLPPYI + D YQT
Sbjct: 113 DGRLKAVVKEELEHGGRIIEFKYDGIFLE-ILESLGEMPLPPYIKERLD----DPDRYQT 167
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ GS AAPTAGLHFT LL + + G+ + ++TLHVG GTF PV V++ ++H MHS
Sbjct: 168 VYAEENGSAAAPTAGLHFTKELLEEIKAKGVHLVYLTLHVGLGTFRPVSVDNIEEHHMHS 227
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + A+ LN V+ GGRIV+VGTTS+R LET T+ +G I SG+T+IFITPGY
Sbjct: 228 EFYRLTEEAAKQLNEVRQAGGRIVAVGTTSIRTLETIGTKFNGEIQADSGWTDIFITPGY 287
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+F+ V+ +NFHLPKSTL+MLVSAF G + T Y+HAI YRF+S+GD +
Sbjct: 288 QFKVVEAFSTNFHLPKSTLVMLVSAFAGKDLTLAAYKHAIEEKYRFFSFGDAMFI 342
>gi|90414611|ref|ZP_01222584.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Photobacterium profundum 3TCK]
gi|90324327|gb|EAS40896.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Photobacterium profundum 3TCK]
Length = 351
Score = 458 bits (1179), Expect = e-127, Method: Composition-based stats.
Identities = 143/363 (39%), Positives = 200/363 (55%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + I D+ D V
Sbjct: 1 MQVSDFHFDLPDELIARYPQPERTASRLLQLTGETGN---IQHKGFKDVLELAEPGDLFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + S + R SK K G+ L
Sbjct: 58 FNNTRVIPARIFGRKAS-----GGKIEVLVERMLDDKSILAHVRASKSPKPGNELLLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D +A +I + +T + + S + + VG +PLPPYI RP + D Y
Sbjct: 113 DD---YQAEMIARHDT--LFEIRFNSDKTVLEILEEVGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y G+VAAPTAGLHF L++ L + G+ FVTLHVGAGTF PV+V++ DDH M
Sbjct: 166 QTVYNAKPGAVAAPTAGLHFDDELMAALKAKGVNFAFVTLHVGAGTFQPVRVDNIDDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
HSE + A+N+ K+ GGRI++VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HSEYVEVPQDVVDAVNATKANGGRIIAVGTTSVRSLESAAQDAVKKGTELVPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY F+ VD+L++NFHLP+STL+MLVSAF G E T Y A+ + YRF+SYGD+ +
Sbjct: 286 IFPGYEFQLVDVLVTNFHLPESTLIMLVSAFAGYEHTMNAYLQAVDNQYRFFSYGDSMFI 345
Query: 357 FQK 359
++
Sbjct: 346 TRR 348
>gi|28378877|ref|NP_785769.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus plantarum WCFS1]
gi|254557082|ref|YP_003063499.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus plantarum JDM1]
gi|300768017|ref|ZP_07077923.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Lactobacillus plantarum subsp. plantarum ATCC 14917]
gi|308181076|ref|YP_003925204.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus plantarum subsp. plantarum ST-III]
gi|38258031|sp|Q88V04|QUEA_LACPL RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|28271714|emb|CAD64620.1| S-adenosylmethionine tRNA ribosyltransferase-isomerase
[Lactobacillus plantarum WCFS1]
gi|254046009|gb|ACT62802.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus plantarum JDM1]
gi|300494366|gb|EFK29528.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Lactobacillus plantarum subsp. plantarum ATCC 14917]
gi|308046567|gb|ADN99110.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus plantarum subsp. plantarum ST-III]
Length = 344
Score = 458 bits (1179), Expect = e-127, Method: Composition-based stats.
Identities = 150/357 (42%), Positives = 208/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +++FD+DLP IA P+ RDS+RL+ + + D D+ LN DA+V
Sbjct: 3 LTLEDFDYDLPHELIAQTPIKKRDSSRLLELDRQTG---EMQDKHFYDIIDQLNPGDAVV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN++V+ A+L GV+ L + W +P+K K G ++ F
Sbjct: 60 MNNSRVMPARLYGVK----PETGGHAEVLLLHNTEGDEWETLMKPAKRAKVGTVISF--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L ATV + G ++ F GI + +G PLPPYI K D Y
Sbjct: 113 -GDGKLTATVTAEKEDGIRMIEFHYDGI-FMEILESLGETPLPPYIKEKLD----DPDRY 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLH+T LL ++ GIK+ ++TLHVG GTF PV+ ++ DDH M
Sbjct: 167 QTVYAKENGSAAAPTAGLHWTKELLQKVQDKGIKLVYLTLHVGLGTFRPVEEDNIDDHKM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE +D A+ LN V+ GGRI++ GTTS+R LET ++ DG I P SG+T+IFI P
Sbjct: 227 HSEFYRLDEDAAKTLNEVRQNGGRIIATGTTSIRTLETIGSKFDGEIKPDSGWTDIFIKP 286
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+++ VD ++NFHLPKSTL+MLV+AF G + K YQHAI YRF+S+GD +
Sbjct: 287 GYQWKVVDAFITNFHLPKSTLVMLVAAFTGRDMILKAYQHAIDEKYRFFSFGDAMFI 343
>gi|227484944|ref|ZP_03915260.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Anaerococcus lactolyticus ATCC 51172]
gi|227237099|gb|EEI87114.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Anaerococcus lactolyticus ATCC 51172]
Length = 340
Score = 458 bits (1179), Expect = e-127, Method: Composition-based stats.
Identities = 140/356 (39%), Positives = 201/356 (56%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M EFD+ LP IA P RD AR+MV+ D ++ +L + D +V
Sbjct: 1 MRTSEFDYYLPEELIAQHPTSKRDEARMMVLDRKSGER---EDKYFFEIIDYLKAGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G R +E++I L W V RP K +K G + F
Sbjct: 58 MNDTRVIPARLFGHR----PEKEEKIEVFLLNNTEGAKWEVLVRPGKKMKIGTEVIFSDD 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L V+D + G ++ F GI + +G +PLPPYI K +D DY
Sbjct: 114 -----LSCKVVDVKDDGNRIVEFYYEGI-FNEILDRLGNMPLPPYIKEK----LKDNEDY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GSVAAPTAGLHFT LL ++ G+K+ ++TL+VG GTF PV ++ +H M
Sbjct: 164 QTVYSKNPGSVAAPTAGLHFTKELLEKIEEKGVKLAYLTLNVGLGTFRPVNEDEITNHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + T++ LN KS G RI++VGTTS+R LE+ ++ I SG+T+IFI PG
Sbjct: 224 HSEFYTLSEETSKILNEAKSEGRRIIAVGTTSIRTLESVYKKNNKICADSGWTDIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ F+ VD +++NFHLPKSTL+ML++AF + Y+ A++ YRF+S+GD +
Sbjct: 284 FEFKVVDAIITNFHLPKSTLIMLIAAFTSKDIILDAYKDAVNKKYRFFSFGDCMFI 339
>gi|54307937|ref|YP_128957.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Photobacterium profundum SS9]
gi|46912363|emb|CAG19155.1| putative S-adenosylmethionine:tRNAribosyltransferase-isomerase
[Photobacterium profundum SS9]
Length = 367
Score = 458 bits (1179), Expect = e-127, Method: Composition-based stats.
Identities = 144/363 (39%), Positives = 201/363 (55%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + I D+ S D V
Sbjct: 17 MQVSDFHFDLPNELIARYPQPERTASRLLQLTGETGN---IQHKGFKDVLDLAESGDLFV 73
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + S + R SK K G+ L
Sbjct: 74 FNNTRVIPARIFGRKAS-----GGKIEVLVERILDDKSILAHVRASKSPKPGNELLLGEN 128
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D +A +I + +T + + S + + VG +PLPPYI RP + D Y
Sbjct: 129 DD---YQAEMIARHDT--LFEIRFNSDKTVLEILEEVGHMPLPPYI--DRPDEDADKERY 181
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y G+VAAPTAGLHF L++ L + G+ FVTLHVGAGTF PV+V++ DDH M
Sbjct: 182 QTVYNAKPGAVAAPTAGLHFDDKLMAALKAKGVNFAFVTLHVGAGTFQPVRVDNIDDHHM 241
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
HSE + A+N+ K+ GGRI++VGTTS+R LE+A + + P+ G T IF
Sbjct: 242 HSEYVEVPQDVVDAVNATKANGGRIIAVGTTSVRSLESAAQDAVKKGTELVPFFGDTEIF 301
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY F+ VD+L++NFHLP+STL+MLVSAF G E T Y A+ + YRF+SYGD+ +
Sbjct: 302 IFPGYEFQLVDVLVTNFHLPESTLIMLVSAFAGYEHTMNAYLQAVDNKYRFFSYGDSMFI 361
Query: 357 FQK 359
++
Sbjct: 362 TRR 364
>gi|288904875|ref|YP_003430097.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus gallolyticus UCN34]
gi|306830927|ref|ZP_07464089.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus gallolyticus subsp. gallolyticus TX20005]
gi|325977816|ref|YP_004287532.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus gallolyticus subsp. gallolyticus ATCC
BAA-2069]
gi|288731601|emb|CBI13156.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus gallolyticus UCN34]
gi|304426950|gb|EFM30060.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus gallolyticus subsp. gallolyticus TX20005]
gi|325177744|emb|CBZ47788.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus gallolyticus subsp. gallolyticus ATCC
BAA-2069]
Length = 342
Score = 458 bits (1178), Expect = e-127, Method: Composition-based stats.
Identities = 154/357 (43%), Positives = 213/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF+LP IA P+ RDS++L+V+ + D + LN DA+V
Sbjct: 1 MNTNDFDFNLPEELIAQTPLEKRDSSKLLVIDHKT---HEMVDAHFDHILDELNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGEK----PDTHGHVELLLLKNTQGDQWEVLAKPAKRLRVGAKVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+++ + G ++ F+ GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVVEELDHGGRIVEFAYDGIFLE-VLESLGEMPLPPYIHEKLD----DPDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ + G+K+ ++TLHVG GTF PV V++ ++H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTQDLLAKIEAKGVKLVYLTLHVGLGTFRPVSVDNIEEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ G R+V+VGTTS+R LET ++ +G I SG+TNIFI P
Sbjct: 225 HSEFYTLSEEAAQTLRDVKAAGRRVVAVGTTSIRTLETIGSKFNGDIKADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+ VD +NFHLPKSTL+MLVSAF G E YQHAI YRF+S+GD +
Sbjct: 285 GYEFKVVDAFSTNFHLPKSTLVMLVSAFAGREFVLDAYQHAIDERYRFFSFGDAMFV 341
>gi|229086981|ref|ZP_04219138.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock3-44]
gi|228696357|gb|EEL49185.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock3-44]
Length = 350
Score = 458 bits (1178), Expect = e-127, Method: Composition-based stats.
Identities = 151/357 (42%), Positives = 205/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQTPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEDGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT I + G L FS GI + +G +PLPPYI D Y
Sbjct: 111 -GEGKLKATCIGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKE----TLEDRDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+ + F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKKKGVHLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT DG I SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETADLLNRVKENGGRIITVGTTSTRTLETIATDNDGKICGASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF E Y A+ YRF+S+GD +
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRENVLHAYNEAVKEKYRFFSFGDAMFV 341
>gi|209549347|ref|YP_002281264.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|226713846|sp|B5ZPR8|QUEA_RHILW RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|209535103|gb|ACI55038.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Rhizobium
leguminosarum bv. trifolii WSM2304]
Length = 379
Score = 458 bits (1178), Expect = e-127, Method: Composition-based stats.
Identities = 215/378 (56%), Positives = 255/378 (67%), Gaps = 20/378 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLS----------------CPLVISDH 44
M V FDFDLP RIALRP PRDSARL+VV+P+ SDH
Sbjct: 1 MRVDLFDFDLPDERIALRPAEPRDSARLLVVNPHAESRPHAESVPHAESRPHAESAFSDH 60
Query: 45 LVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYAR 104
V DLP+FL + DA+VFN+TKVI AQL G+R +++S TLHMRV P+ W +A+
Sbjct: 61 RVGDLPSFLRAGDALVFNDTKVIPAQLEGIRHR-DGAGGQQVSATLHMRVGPSRWKAFAK 119
Query: 105 PSKVIKKGDILHFFSQDGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIP 161
P K IK+GD + F L+ATV +K GE+ L F +SG L+ I+ VG IP
Sbjct: 120 PGKRIKEGDRIAFGHSGESCLLGSLDATVEEKGEAGEVTLAFDLSGPALDEAIAAVGHIP 179
Query: 162 LPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLH 221
LPPYIA KRP D RD DYQT YA+ +G+VAAPTAGLHFT L L GI+ +FVTLH
Sbjct: 180 LPPYIAAKRPEDERDRADYQTIYAREEGAVAAPTAGLHFTPALFEALDRAGIERHFVTLH 239
Query: 222 VGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT 281
VGAGTF+PVK +DT DH MH E G + A TA LN+VK+RGGRIV VGTTSLRL+E+A
Sbjct: 240 VGAGTFLPVKADDTADHKMHLESGTVSAETAARLNAVKARGGRIVCVGTTSLRLIESAAE 299
Query: 282 EDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAI 341
E G I WSG T IFITPGYRF+AVD+LM+NFHLP+STL MLVSAF G E Y+HAI
Sbjct: 300 ESGEIRGWSGATGIFITPGYRFKAVDMLMTNFHLPRSTLFMLVSAFSGFETMHAAYKHAI 359
Query: 342 SHAYRFYSYGDTSLLFQK 359
S YRFYSYGD SLLF+K
Sbjct: 360 STGYRFYSYGDASLLFRK 377
>gi|312143982|ref|YP_003995428.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Halanaerobium sp. 'sapolanicus']
gi|311904633|gb|ADQ15074.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Halanaerobium sp. 'sapolanicus']
Length = 347
Score = 458 bits (1178), Expect = e-127, Method: Composition-based stats.
Identities = 148/362 (40%), Positives = 206/362 (56%), Gaps = 19/362 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V+EFD+ LP IA +P+ RD +RLMV+ P +I + L +L +L D ++
Sbjct: 1 MRVEEFDYQLPEELIAQKPLPERDMSRLMVLDPQ---NKMIREDLFKNLKRYLEPGDRLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN++VI A+L G + EI L + W V +P + KKG + F
Sbjct: 58 LNNSRVIPARLYGEKI----PTGTEIEILLLNELKEGRWEVLVKPGRRAKKGVKIQF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSIS--GIELERQISLVGTIPLPPYIARKRPIDARDYV 178
Q+ LEA V++ + G ++ FS E ++ +G +PLPPYI K
Sbjct: 111 --QNILEAEVLEYTDFGGRIVEFSWDDGCSSFEEILNKLGEMPLPPYINEKLDN----PE 164
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y+K +GS AAPTAGLHFT LL L + G+K+ ++TLHVG GTF PVK E +DH
Sbjct: 165 RYQTVYSKKRGSAAAPTAGLHFTDQLLRDLENYGVKIDYITLHVGLGTFRPVKSEKIEDH 224
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E I T + ++ G ++V+VGTT R LETA + G I + G+T+IFI
Sbjct: 225 KMHAEYAEISPETVARIKKTQANGNKVVAVGTTVTRTLETAA-QSGSIKAFKGWTDIFIY 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY F+ +D L++NFHLPKSTLLMLVSA G E K Y A+ YRF+S GD L+
Sbjct: 284 PGYEFKVIDSLITNFHLPKSTLLMLVSALAGKELILKAYNQAVEEEYRFFSLGDAMLILN 343
Query: 359 KR 360
++
Sbjct: 344 RK 345
>gi|260890428|ref|ZP_05901691.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Leptotrichia hofstadii F0254]
gi|260860048|gb|EEX74548.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Leptotrichia hofstadii F0254]
Length = 340
Score = 458 bits (1178), Expect = e-127, Method: Composition-based stats.
Identities = 141/357 (39%), Positives = 204/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF+LP IA V PRD ++L+V++ + ++ +L +D +V
Sbjct: 1 MKISDFDFELPEELIAQHAVNPRDHSKLLVLNKK---EKTLEHKKFYNIIDYLKKDDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKVI A+L G + + + C L R +W V +P+K +K G L F
Sbjct: 58 INRTKVIPARLFGHKENGVV-----LECFLLKRYDLYTWEVLLKPAKKLKIGQKLIFL-- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ LEA +++ G ++ F+ G E + +G +PLPPYI K D Y
Sbjct: 111 --EGVLEAELMEIKEDGNRIIKFNFEG-RFEEILDKLGEMPLPPYIVEK----LEDKNRY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK SVAAPTAGLHFT+ LL ++ G+ + V L VG GTF PV+VE+ DH M
Sbjct: 164 QTVYAKEGESVAAPTAGLHFTNELLGKIREKGVIITEVFLDVGLGTFRPVQVENVLDHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I T + +N K +G R+++VGTTS+R LE++ ++G + G TNIFI
Sbjct: 224 HSEKYRIPEETVKIINKAKEKGNRVIAVGTTSVRTLESSVDDNGKLIASEGDTNIFIYGD 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+ VD +++NFHLPKSTL+ML+SAF G E + Y+ AI YRFYS+GD+ ++
Sbjct: 284 YNFKIVDAIITNFHLPKSTLIMLISAFGGKEFIFEAYKKAIEEKYRFYSFGDSMFIY 340
>gi|116617730|ref|YP_818101.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|116096577|gb|ABJ61728.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Leuconostoc mesenteroides subsp. mesenteroides ATCC
8293]
Length = 377
Score = 458 bits (1178), Expect = e-127, Method: Composition-based stats.
Identities = 141/358 (39%), Positives = 202/358 (56%), Gaps = 13/358 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FD+DLP + IA P+ RD++RL+ ++ D D+ +LN DAIV
Sbjct: 32 TLSDFDYDLPEALIAQTPLKQRDASRLLALNAKTGG---YEDKHFYDILDYLNPGDAIVM 88
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NN++V+ A+L+G R L + + W +P+K G + F
Sbjct: 89 NNSRVLPARLHGAR----PETGGHAEVLLLRQDHGDVWETLVKPAKKSPVGSTIVFGDDI 144
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ ATV+ + G + F GI ++ +G +PLPPYI K D YQ
Sbjct: 145 ENPIMTATVVGELEHGGRYIEFHYDGI-FMELLNQLGEMPLPPYIKEKLD----DQERYQ 199
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T Y+K+ GS AAPTAGLH+T LL R+ + G+K +TLHVG GTF PV E+ +DH MH
Sbjct: 200 TVYSKVDGSAAAPTAGLHWTPELLDRVRAKGVKTVELTLHVGLGTFRPVDEENIEDHKMH 259
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPG 300
SE + A LNSV+ GGRI++ GTTS+R LET T+ +G + SG+T+IFI PG
Sbjct: 260 SEFYQLSQEAADELNSVRKHGGRIIATGTTSIRTLETIGTKFNGDLTADSGWTDIFIKPG 319
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y + VD ++NFHLPKSTL+MLV+AF G + Y+HA+ YRF+S+GD + +
Sbjct: 320 YNWTVVDAFITNFHLPKSTLVMLVAAFTGRDNILNAYKHAVDDQYRFFSFGDAMFIHK 377
>gi|227524334|ref|ZP_03954383.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus hilgardii ATCC 8290]
gi|227088565|gb|EEI23877.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus hilgardii ATCC 8290]
Length = 352
Score = 458 bits (1178), Expect = e-127, Method: Composition-based stats.
Identities = 143/356 (40%), Positives = 211/356 (59%), Gaps = 17/356 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+++FD+ LP IA P+ RD +RL+V++ + D ++ +LN DA+V
Sbjct: 12 TLEDFDYKLPHELIAQTPIKDRDESRLLVLNKETGD---MQDRRFYNIIDYLNPGDALVM 68
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N++KV+ A++ GV+ I L + + W +P+K K G ++ F
Sbjct: 69 NDSKVMPARIYGVK----KDTGAHIEVLLLHNIEGDRWETLMKPAKRAKVGTVIGF---- 120
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G+ +L+A V + + G + F GI +E + +G PLPPYI K D YQ
Sbjct: 121 GEGQLQAVVTKELDHGGREIEFKYEGIFIE-ILERLGETPLPPYIKEKLD----DPNRYQ 175
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YAK GS AAPTAGLH+T LL ++ G+ + ++TLHVG GTF PV+ ++ +DH MH
Sbjct: 176 TVYAKEMGSAAAPTAGLHWTKELLQKVADKGVHLVYLTLHVGLGTFRPVEEDNIEDHKMH 235
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPG 300
SE + ++ LN V+ GG+IV+ GTTS+R LET T+ +G I P SG+T+IFI PG
Sbjct: 236 SEFYRLSEEASKTLNDVRKNGGKIVATGTTSIRTLETVGTKFNGEIRPDSGWTDIFIKPG 295
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+++ VD ++NFHLPKSTL+MLV++F G E YQHAIS YRF+S+GD +
Sbjct: 296 YQWQVVDSFITNFHLPKSTLVMLVASFTGRENILNAYQHAISEKYRFFSFGDAMYI 351
>gi|331701282|ref|YP_004398241.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus buchneri NRRL B-30929]
gi|329128625|gb|AEB73178.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus buchneri NRRL B-30929]
Length = 346
Score = 458 bits (1178), Expect = e-127, Method: Composition-based stats.
Identities = 144/356 (40%), Positives = 209/356 (58%), Gaps = 17/356 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+++FD+DLP IA P+ RD +RL+V+ + D ++ +LN DA+V
Sbjct: 6 TLEDFDYDLPHELIAQTPIKDRDESRLLVLDKESG---EMQDRHFYNIIDYLNPGDALVM 62
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N++KV+ A++ GV+ + L + + W +P+K K G +++F
Sbjct: 63 NDSKVMPARIYGVKA----DTGGHMEVLLLHNIEGDRWETLMKPAKKAKVGTVINF---- 114
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G +L+A V + + G + F GI +E + +G PLPPYI K D YQ
Sbjct: 115 GDGQLKAVVTKELDHGGREIEFQYDGIFIE-ILERLGETPLPPYIKEKLD----DPDRYQ 169
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YAK GS AAPTAGLH+T +LL ++ G+ + ++TLHVG GTF PV E+ +DH MH
Sbjct: 170 TVYAKEMGSAAAPTAGLHWTKDLLKKVEDKGVHLVYLTLHVGLGTFRPVDEENIEDHKMH 229
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPG 300
SE + A LN+V+ G+IV+ GTTS+R LET T+ DG I P SG+T+IFI PG
Sbjct: 230 SEFYRLSDQAAATLNAVRDNSGKIVATGTTSIRTLETVGTKFDGQIRPDSGWTDIFIKPG 289
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y++R V+ ++NFHLPKSTL+MLV++F G E YQHAI YRF+S+GD +
Sbjct: 290 YQWRVVNSFITNFHLPKSTLVMLVASFTGRENILNAYQHAIDEKYRFFSFGDAMYI 345
>gi|225627567|ref|ZP_03785604.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti str. Cudo]
gi|260168801|ref|ZP_05755612.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
sp. F5/99]
gi|261758283|ref|ZP_06001992.1| queuosine biosynthesis protein [Brucella sp. F5/99]
gi|225617572|gb|EEH14617.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brucella
ceti str. Cudo]
gi|261738267|gb|EEY26263.1| queuosine biosynthesis protein [Brucella sp. F5/99]
Length = 363
Score = 458 bits (1178), Expect = e-127, Method: Composition-based stats.
Identities = 208/361 (57%), Positives = 256/361 (70%), Gaps = 9/361 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RI LRPV PRD A+L+ V P D V DLP L DA+V
Sbjct: 1 MRVDLFDFDLPEERITLRPVEPRDHAKLLHVRPG----EPFEDRHVYDLPDLLQPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R N + +S TLHMRV P+ W + RP+K +K+GD + F
Sbjct: 57 FNDTKVIPAQLEGMRERTGNISQ--VSATLHMRVGPDRWKAFLRPAKRVKEGDRIRFGHS 114
Query: 121 DGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+ATV +K ++GE LLVF +SG L+ I+ VG IPLPPYIA KRP D RD
Sbjct: 115 GTSCFLGTLDATVAEKGDSGEALLVFDLSGAVLDEAIAAVGHIPLPPYIASKRPEDERDR 174
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YA+ +G+VAAPTAGLHFT +LL ++ + GI+ +FVTLHVGAGTF+PVK +DT D
Sbjct: 175 KDYQTVYAREEGAVAAPTAGLHFTPDLLEKIKARGIEEHFVTLHVGAGTFLPVKADDTGD 234
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+EIG + TA ALN+V RGGRI+ VGTTSLRL+E+AT EDG++ PWSG T+IFI
Sbjct: 235 HKMHAEIGHVSQRTASALNAVHERGGRIICVGTTSLRLIESATGEDGVVRPWSGATDIFI 294
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFRAVD+LM+NFHLP+STL MLVSAF G++ Y +AI+ YRFYSYGD SLL
Sbjct: 295 TPGYRFRAVDLLMTNFHLPRSTLFMLVSAFSGLDTMHAAYNYAIADGYRFYSYGDASLLE 354
Query: 358 Q 358
+
Sbjct: 355 R 355
>gi|15924630|ref|NP_372164.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus Mu50]
gi|15927220|ref|NP_374753.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus N315]
gi|21283319|ref|NP_646407.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus MW2]
gi|49483884|ref|YP_041108.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus MRSA252]
gi|49486473|ref|YP_043694.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus MSSA476]
gi|148268120|ref|YP_001247063.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus JH9]
gi|150394188|ref|YP_001316863.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus JH1]
gi|156979958|ref|YP_001442217.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus Mu3]
gi|253317209|ref|ZP_04840422.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus str. CF-Marseille]
gi|255006425|ref|ZP_05145026.2| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus Mu50-omega]
gi|258438213|ref|ZP_05689497.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A9299]
gi|258443676|ref|ZP_05692015.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A8115]
gi|258446883|ref|ZP_05695037.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A6300]
gi|258448797|ref|ZP_05696909.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A6224]
gi|258453753|ref|ZP_05701728.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A5937]
gi|269203265|ref|YP_003282534.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus ED98]
gi|282893144|ref|ZP_06301378.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A8117]
gi|282904220|ref|ZP_06312108.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus C160]
gi|282906046|ref|ZP_06313901.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus Btn1260]
gi|282916908|ref|ZP_06324666.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus D139]
gi|282928275|ref|ZP_06335880.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A10102]
gi|283958400|ref|ZP_06375851.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus A017934/97]
gi|295406761|ref|ZP_06816566.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A8819]
gi|295428215|ref|ZP_06820847.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus EMRSA16]
gi|296275925|ref|ZP_06858432.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus MR1]
gi|297245656|ref|ZP_06929521.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A8796]
gi|54038976|sp|P65951|QUEA_STAAN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|54038977|sp|P65952|QUEA_STAAW RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|54041780|sp|P65950|QUEA_STAAM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|56749512|sp|Q6G8S9|QUEA_STAAS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|56749559|sp|Q6GG64|QUEA_STAAR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|91207405|sp|Q2YT90|QUEA_STAAB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|166218744|sp|A7X356|QUEA_STAA1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|189038882|sp|A6U2A8|QUEA_STAA2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|189038883|sp|A5ITG4|QUEA_STAA9 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|13701438|dbj|BAB42732.1| S-adenosylmethionine tRNA ribosyltransferase [Staphylococcus aureus
subsp. aureus N315]
gi|14247412|dbj|BAB57802.1| S-adenosylmethionine tRNA ribosyltransferase [Staphylococcus aureus
subsp. aureus Mu50]
gi|21204759|dbj|BAB95455.1| S-adenosylmethionine tRNA ribosyltransferase [Staphylococcus aureus
subsp. aureus MW2]
gi|49242013|emb|CAG40711.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus MRSA252]
gi|49244916|emb|CAG43377.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus MSSA476]
gi|147741189|gb|ABQ49487.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus JH9]
gi|149946640|gb|ABR52576.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus JH1]
gi|156722093|dbj|BAF78510.1| S-adenosylmethionine tRNA ribosyltransferase [Staphylococcus aureus
subsp. aureus Mu3]
gi|257848257|gb|EEV72248.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A9299]
gi|257851082|gb|EEV75025.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A8115]
gi|257854458|gb|EEV77407.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A6300]
gi|257858075|gb|EEV80964.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A6224]
gi|257864073|gb|EEV86826.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A5937]
gi|262075555|gb|ACY11528.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus ED98]
gi|282319395|gb|EFB49747.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus D139]
gi|282331338|gb|EFB60852.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus Btn1260]
gi|282590082|gb|EFB95164.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A10102]
gi|282595838|gb|EFC00802.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus C160]
gi|282764462|gb|EFC04588.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A8117]
gi|283790549|gb|EFC29366.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus A017934/97]
gi|285817322|gb|ADC37809.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus 04-02981]
gi|294968508|gb|EFG44532.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A8819]
gi|295128573|gb|EFG58207.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus EMRSA16]
gi|297177307|gb|EFH36559.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A8796]
gi|302333313|gb|ADL23506.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus JKD6159]
gi|312830026|emb|CBX34868.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus ECT-R 2]
gi|315129925|gb|EFT85915.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus CGS03]
gi|315195543|gb|EFU25930.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus CGS00]
gi|329727664|gb|EGG64120.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus 21172]
gi|329733065|gb|EGG69402.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus 21193]
Length = 341
Score = 458 bits (1178), Expect = e-127, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 209/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EFD+DLP S IA P+ RD +RL+V+ + D+ + D +V
Sbjct: 1 MNIEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETG---EMKHLHFKDIIEYFRPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 58 LNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI + D Y
Sbjct: 111 -GNGKIIAECIKEMDQGGRIMRLHYEGI-LQERLDELGEMPLPPYIKERLD----DPDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + FVTLHVG GTF PV V+D +DH M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTDELLTEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN KS+G RI+SVGTTS R LET + SG+TNIFI PG
Sbjct: 225 HSEYYQMTQETADLLNDTKSKGHRIISVGTTSTRTLETIRRDHDKFVETSGWTNIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 285 FDFKAIDGQITNFHLPKSTLVMLVSAFSTRENVLNAYKTAVNLEYRFFSFGDAMLII 341
>gi|289550595|ref|YP_003471499.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus lugdunensis HKU09-01]
gi|289180127|gb|ADC87372.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus lugdunensis HKU09-01]
Length = 341
Score = 458 bits (1178), Expect = e-127, Method: Composition-based stats.
Identities = 144/357 (40%), Positives = 212/357 (59%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++FD+ LP S IA P+ RD +RL+V++ + D+ +LN D +V
Sbjct: 1 MNIEDFDYHLPESLIAQTPLKNRDQSRLLVLNKETGD---MKHQHFKDVINYLNPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L GV+ ++ + ++ N W V +P+K IK G+ L F
Sbjct: 58 LNDTRVMPARLFGVK----EETGAKVEMLMLTQIENNDWEVLLKPAKRIKVGNQLSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ ++ A I + + G ++ GI L+ ++ +G +PLPPYI + D Y
Sbjct: 111 -GEGKIIAECIKELDQGGRIMRLHYEGI-LQERLDELGEMPLPPYIKARLD----DPDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT NLL + + G+ + F+TLHVG GTF PV VE+ ++H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTDNLLKDIKAKGVNIAFITLHVGLGTFRPVSVENINEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA+ LN+ K +G RI++VGTTS R LET + SG+T+IFI PG
Sbjct: 225 HSEYYQMTENTAKLLNNTKLQGHRIIAVGTTSTRTLETIRRDHSQFIATSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+A+D L++NFHLPKSTL+MLVSAF + Y+ A+ YRF+S+GD L+
Sbjct: 285 FEFKAIDALITNFHLPKSTLVMLVSAFSSRQFILTAYRKAVELEYRFFSFGDAMLII 341
>gi|171778635|ref|ZP_02919731.1| hypothetical protein STRINF_00583 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171282592|gb|EDT48016.1| hypothetical protein STRINF_00583 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 342
Score = 458 bits (1178), Expect = e-127, Method: Composition-based stats.
Identities = 157/357 (43%), Positives = 212/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF+LP IA P+ RDS++L+V+ + D + LNS DA+V
Sbjct: 1 MHTDDFDFNLPEELIAQTPLEKRDSSKLLVIDHKT---HEMVDAHFDHILDELNSGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K + G + F
Sbjct: 58 MNNTRVLPARLYGEK----PDTHGHVELLLLKNTEGDQWEVLAKPAKRLHVGVKVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+++ + G ++ F GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVVEELDNGGRIVEFDYDGIFLE-VLESLGEMPLPPYIHEKLD----DPNRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ +VTLHVG GTF PV V++ ++H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTKELLEKIEAKGVKLVYVTLHVGLGTFRPVSVDNVEEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ GGR+V+VGTTS+R LET ++ +G I SG+TNIFI P
Sbjct: 225 HSEFYRLSEEAAQTLRDVKATGGRVVAVGTTSIRTLETIGSKFNGEIKADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+ VD +NFHLPKSTL+MLVSAF G E + YQHAI YRF+S+GD +
Sbjct: 285 GYDFKVVDAFSTNFHLPKSTLVMLVSAFAGREFVLEAYQHAIDERYRFFSFGDAMFV 341
>gi|323440807|gb|EGA98516.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus O11]
gi|323442844|gb|EGB00469.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus O46]
Length = 341
Score = 458 bits (1178), Expect = e-127, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 209/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EFD+DLP S IA P+ RD +RL+V+ + D+ + D +V
Sbjct: 1 MNIEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETG---EMKHLHFKDIIEYFRPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 58 LNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI + D Y
Sbjct: 111 -GNGKIIAECIKEMDQGGRIMRLHYEGI-LQERLDELGEMPLPPYIKERLD----DPDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + FVTLHVG GTF PV V+D +DH M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTDELLTEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN KS+G RI+SVGTTS R LET + SG+TNIFI PG
Sbjct: 225 HSEYYQMTQETADLLNDTKSKGHRIISVGTTSTRTLETIRRDYDKFVETSGWTNIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 285 FDFKAIDGQITNFHLPKSTLVMLVSAFSTRENVLNAYKTAVNLEYRFFSFGDAMLII 341
>gi|73662428|ref|YP_301209.1| S-adenosylmethionine tRNA ribosyltransferase [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
gi|91207328|sp|Q49Y78|QUEA_STAS1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|72494943|dbj|BAE18264.1| S-adenosylmethionine tRNA ribosyltransferase [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
Length = 341
Score = 457 bits (1177), Expect = e-127, Method: Composition-based stats.
Identities = 145/357 (40%), Positives = 209/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++ FD+ LP + IA P+ RD +RL+++ I D+ +LN D +V
Sbjct: 1 MDIEAFDYHLPEALIAQTPLKNRDESRLLILGRQSG---YIEHKHFKDVTDYLNEGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L F
Sbjct: 58 LNDTRVMPARLFGMK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ ++ A I++ + G ++ GI L+ ++ +G +PLPPYI + D Y
Sbjct: 111 -GEGKIIAECIEELDQGGRIMRLHYDGI-LQERLDELGEMPLPPYIKERLD----DQERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL R+ + G+ + F+TLHVG GTF PV V++ DDH M
Sbjct: 165 QTVYAKASGSAAAPTAGLHFTDELLERIKAQGVNIAFITLHVGLGTFRPVSVDNIDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D TA LNS + G RI+SVGTTS R LET SG+T+IFI PG
Sbjct: 225 HSEYYQMDEATANLLNSTRDNGNRIISVGTTSTRTLETIMQSSDRFVAKSGWTDIFIFPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+A+D L++NFHLPKSTL+MLVSAF + Y A++ YRF+S+GD L+
Sbjct: 285 FNFKAIDGLITNFHLPKSTLVMLVSAFSSRDYIINAYNQAVASEYRFFSFGDAMLII 341
>gi|57650521|ref|YP_186534.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus COL]
gi|87162434|ref|YP_494291.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus USA300_FPR3757]
gi|88195451|ref|YP_500255.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus NCTC 8325]
gi|151221754|ref|YP_001332576.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus str. Newman]
gi|161509866|ref|YP_001575525.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus USA300_TCH1516]
gi|221141091|ref|ZP_03565584.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus str. JKD6009]
gi|258450534|ref|ZP_05698596.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A5948]
gi|262051290|ref|ZP_06023514.1| S-adenosylmethionine tRNA ribosyltransferase [Staphylococcus aureus
930918-3]
gi|282920189|ref|ZP_06327914.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A9765]
gi|284024696|ref|ZP_06379094.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus 132]
gi|294848669|ref|ZP_06789415.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A9754]
gi|71153094|sp|Q5HFC3|QUEA_STAAC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|122539357|sp|Q2FXT5|QUEA_STAA8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|123485522|sp|Q2FG87|QUEA_STAA3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|172048926|sp|A6QHI2|QUEA_STAAE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|189038884|sp|A8Z2G8|QUEA_STAAT RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|57284707|gb|AAW36801.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus COL]
gi|87128408|gb|ABD22922.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus USA300_FPR3757]
gi|87203009|gb|ABD30819.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus NCTC 8325]
gi|150374554|dbj|BAF67814.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus str. Newman]
gi|160368675|gb|ABX29646.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus USA300_TCH1516]
gi|257861692|gb|EEV84491.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A5948]
gi|259160927|gb|EEW45947.1| S-adenosylmethionine tRNA ribosyltransferase [Staphylococcus aureus
930918-3]
gi|282594537|gb|EFB99522.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A9765]
gi|294824695|gb|EFG41118.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A9754]
gi|302751468|gb|ADL65645.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus str. JKD6008]
gi|315198659|gb|EFU28987.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus CGS01]
gi|329314314|gb|AEB88727.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus T0131]
gi|329728451|gb|EGG64888.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus 21189]
Length = 341
Score = 457 bits (1177), Expect = e-127, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 208/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EFD+DLP S IA P+ RD +RL+V+ + D+ + D +V
Sbjct: 1 MNIEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETG---EMKHLHFKDIIEYFRPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 58 LNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI + D Y
Sbjct: 111 -GNGKIIAECIKEMDQGGRIMRLHYEGI-LQERLDELGEMPLPPYIKERLD----DPDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + + G+ + FVTLHVG GTF PV V+D +DH M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTDELLIEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN KS+G RI+SVGTTS R LET + SG+TNIFI PG
Sbjct: 225 HSEYYQMTQETADLLNDTKSKGHRIISVGTTSTRTLETIRRDHDKFVETSGWTNIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 285 FDFKAIDGQITNFHLPKSTLVMLVSAFSSRENVLNAYKTAVNLEYRFFSFGDAMLII 341
>gi|257425764|ref|ZP_05602188.1| S-adenosylmethioninetRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus 55/2053]
gi|257428424|ref|ZP_05604822.1| S-adenosylmethioninetRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus 65-1322]
gi|257431062|ref|ZP_05607441.1| S-adenosylmethioninetRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus 68-397]
gi|257433748|ref|ZP_05610106.1| S-adenosylmethioninetRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus E1410]
gi|257436663|ref|ZP_05612707.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus M876]
gi|282914445|ref|ZP_06322231.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus M899]
gi|282924791|ref|ZP_06332457.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus C101]
gi|293503518|ref|ZP_06667365.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus 58-424]
gi|293510537|ref|ZP_06669242.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus M809]
gi|293537080|ref|ZP_06671760.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus M1015]
gi|257271458|gb|EEV03604.1| S-adenosylmethioninetRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus 55/2053]
gi|257275265|gb|EEV06752.1| S-adenosylmethioninetRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus 65-1322]
gi|257278265|gb|EEV08907.1| S-adenosylmethioninetRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus 68-397]
gi|257281841|gb|EEV11978.1| S-adenosylmethioninetRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus E1410]
gi|257284014|gb|EEV14137.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus M876]
gi|282313157|gb|EFB43553.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus C101]
gi|282321626|gb|EFB51951.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus M899]
gi|290919925|gb|EFD96993.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus M1015]
gi|291095184|gb|EFE25449.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus 58-424]
gi|291466428|gb|EFF08949.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus M809]
Length = 341
Score = 457 bits (1177), Expect = e-126, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 209/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EFD+DLP S IA P+ RD +RL+V+ + D+ + D +V
Sbjct: 1 MNIEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETG---EMKHLHFKDIIEYFRPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 58 LNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI + D Y
Sbjct: 111 -GNGKIIAECIKEMDQGGRIMCLHYEGI-LQERLDELGEMPLPPYIKERLD----DPDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + FVTLHVG GTF PV V+D +DH M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTDELLTEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN KS+G RI+SVGTTS R LET + SG+TNIFI PG
Sbjct: 225 HSEYYQMTQETADLLNDTKSKGHRIISVGTTSTRTLETIRRDHDKFVETSGWTNIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 285 FDFKAIDGQITNFHLPKSTLVMLVSAFSTRENVLNAYKTAVNLEYRFFSFGDAMLII 341
>gi|237808776|ref|YP_002893216.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Tolumonas
auensis DSM 9187]
gi|259551487|sp|C4L7L4|QUEA_TOLAT RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|237501037|gb|ACQ93630.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Tolumonas
auensis DSM 9187]
Length = 348
Score = 457 bits (1177), Expect = e-126, Method: Composition-based stats.
Identities = 141/364 (38%), Positives = 204/364 (56%), Gaps = 23/364 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +F FDLP IA P+ R ++RL+++ N D+ L D +V
Sbjct: 1 MLVSDFQFDLPDELIARYPMPERSASRLLMLDGNSGET---RHGQFRDVLDLLQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + +S + R SK K G +
Sbjct: 58 FNNTRVIPARMFGQKAS-----GGKLEILVERILDDHSVLAHVRASKAPKPGTQILL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGI-ELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ A ++ + +T L +G + ++ +G +PLPPYI RP + D
Sbjct: 110 --DNGFSAKMVARHDT---LFELHFAGDLPVLDILNQIGHMPLPPYI--DRPDENSDKER 162
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y + G+VAAPTAGLHF LL+ L G+ +VTLHVGAGTF PV+VE +DH
Sbjct: 163 YQTVYNQRPGAVAAPTAGLHFDEPLLAALREKGVDFAYVTLHVGAGTFQPVRVERLEDHQ 222
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI----INPWSGFTNI 295
MHSE + A +N+ + RGGR+V+VGTTS+R LETA ++P+ G T+I
Sbjct: 223 MHSEYAEVPAEVIAKINATRERGGRVVAVGTTSVRSLETAAQASLKAGKPLSPFFGDTSI 282
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGY+++ VD+L++NFHLP STL+MLVSAF G E YQ AI+ YRF+SYGD
Sbjct: 283 FIFPGYQYQLVDVLITNFHLPGSTLIMLVSAFAGYEHVMNAYQEAITSGYRFFSYGDAMF 342
Query: 356 LFQK 359
+ ++
Sbjct: 343 ITRQ 346
>gi|125623767|ref|YP_001032250.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Lactococcus
lactis subsp. cremoris MG1363]
gi|166216729|sp|A2RJR5|QUEA_LACLM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|124492575|emb|CAL97520.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Lactococcus
lactis subsp. cremoris MG1363]
gi|300070536|gb|ADJ59936.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Lactococcus
lactis subsp. cremoris NZ9000]
Length = 346
Score = 457 bits (1177), Expect = e-126, Method: Composition-based stats.
Identities = 148/360 (41%), Positives = 209/360 (58%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA P+ R +RL+++ P + D D+ L + DA+V
Sbjct: 1 MNINDFDFDLPEELIAQTPLEKRSESRLLILDPKT---EELEDRHFYDIIDELEAGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L+G R I L + N W A+P++ +K G+ + F
Sbjct: 58 LNNTRVLPARLHGERA----ETGGHIELLLLKDMGENRWETLAKPARKMKVGEEVVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A V++ G ++ F GI LE + +G +PLPPYI + D Y
Sbjct: 111 -GDGRLKAVVVEILEHGGRIVEFKYDGIFLE-ILESLGEMPLPPYIHEQ----LEDQERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +AK GS AAPTAGLH+T LL ++ G+K+ +TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVFAKENGSAAAPTAGLHYTPELLEKIADKGVKIVELTLHVGLGTFRPVSVDNVDEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L +VK+ G +I + GTTS+R LET ++ DG I SG+T+IFI P
Sbjct: 225 HSEFYRLTEEAAAQLRAVKASGHKIFASGTTSIRTLETIGSKFDGDIQADSGWTDIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY ++ VD +NFHLPKSTL+MLV+AF G + + YQHAI YRF+S+GD + K
Sbjct: 285 GYEWKVVDAFNTNFHLPKSTLVMLVAAFAGRDFVLEAYQHAIDEKYRFFSFGDAMFVRSK 344
>gi|229076049|ref|ZP_04209020.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock4-18]
gi|229098892|ref|ZP_04229828.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock3-29]
gi|229117918|ref|ZP_04247280.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock1-3]
gi|228665575|gb|EEL21055.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock1-3]
gi|228684565|gb|EEL38507.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock3-29]
gi|228707083|gb|EEL59285.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock4-18]
Length = 354
Score = 457 bits (1177), Expect = e-126, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 205/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 5 MDINLFDFHLPEELIAQVPLEDRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 62 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI D Y
Sbjct: 115 -GEGKLKATCTGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKE----TLEDRDRY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 169 QTVYAKEIGSAAAPTAGLHFTEELLEKLKKKGVQLAFITLHVGLGTFRPVSADTIEEHHM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT G + SG+T+IF+ P
Sbjct: 229 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHSGKLCAASGWTDIFMYP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 289 GYKFKAIDGLITNFHLPKSTLIMLVSAFSNRDNVLHAYNEAVKEKYRFFSFGDAMFV 345
>gi|284048860|ref|YP_003399199.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Acidaminococcus fermentans DSM 20731]
gi|283953081|gb|ADB47884.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Acidaminococcus fermentans DSM 20731]
Length = 338
Score = 457 bits (1176), Expect = e-126, Method: Composition-based stats.
Identities = 143/356 (40%), Positives = 197/356 (55%), Gaps = 19/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD+DLP IA PV PRDS+RL+V+ + +LP +L D +V
Sbjct: 1 MEVTDFDYDLPQELIAQTPVEPRDSSRLLVMDKKTG---ELEHRHFFNLPEYLKPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L+G + + L R + W V +P K ++KG + F +
Sbjct: 58 FNDTRVIPARLHGFKT-----TGAHVEVFLLNRKNATDWEVLVKPGKKLQKGARIKFSDE 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L ++D + G + F GI E + +G PLPPYI K D Y
Sbjct: 113 -----LSCEILDTTDFGGRIARFQYDGI-FEEILDRLGETPLPPYIHEK----LEDKERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + +GS AAPTAGLHFT LL ++ +G++ FVTLHVG GTF PV +DH M
Sbjct: 163 QTVYNRERGSAAAPTAGLHFTRELLQKIRDMGVEEVFVTLHVGLGTFRPVNESRIEDHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A A+N K G RI++VGTTS+R LE+A G + +T+IFI PG
Sbjct: 223 HREFYTVSQEAADAINKAKREGRRIIAVGTTSVRTLESAGAS-GEMKAGGNWTSIFIYPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+FR VD L++NFHLP+STL+MLVSA E Y+ A+ YRF+S+GD +
Sbjct: 282 YQFRFVDALVTNFHLPQSTLIMLVSALSTRENILHAYKVAVQEKYRFFSFGDAMFI 337
>gi|222148799|ref|YP_002549756.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Agrobacterium vitis S4]
gi|254764261|sp|B9JWX0|QUEA_AGRVS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|221735785|gb|ACM36748.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Agrobacterium vitis S4]
Length = 352
Score = 457 bits (1176), Expect = e-126, Method: Composition-based stats.
Identities = 218/359 (60%), Positives = 262/359 (72%), Gaps = 9/359 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP IALRP PRD AR ++V P+ L++ D V +LP+FL + DA+V
Sbjct: 1 MRVDLFDFDLPDENIALRPANPRDQARFLIVRPD--GSLMLEDRRVFELPSFLRAGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL GVR R +SCTLHMRV+ N W +ARP K IK+GD++ F
Sbjct: 59 FNDTKVIPAQLEGVRIREGAER-TPVSCTLHMRVAANRWKAFARPGKRIKQGDVIDF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A V +K GEI L F+ SG +L+R I+ VG IPLPPYIA KRP D++D DY
Sbjct: 115 ---DGLSANVAEKGEAGEIDLEFAASGPDLDRAIAGVGHIPLPPYIAAKRPEDSQDRTDY 171
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +G+VAAPTAGLHFT L L GI+ +FVTLHVGAGTF+PVK +DTDDH M
Sbjct: 172 QTIYAREEGAVAAPTAGLHFTPALFEALDKAGIERHFVTLHVGAGTFLPVKADDTDDHKM 231
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H EIG + A TA+ALN+VK+RGGRIVSVGTTSLRLLE+A +EDG + PWS T IFITPG
Sbjct: 232 HQEIGHVSAETAEALNAVKARGGRIVSVGTTSLRLLESAASEDGRLLPWSDATGIFITPG 291
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRF+AVD+LM+NFHLPKSTL MLVSAF G+E + Y HAI YRFYSYGD+SLLF+K
Sbjct: 292 YRFKAVDVLMTNFHLPKSTLFMLVSAFAGLETMRAAYAHAIETGYRFYSYGDSSLLFRK 350
>gi|292670916|ref|ZP_06604342.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Selenomonas
noxia ATCC 43541]
gi|292647537|gb|EFF65509.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Selenomonas
noxia ATCC 43541]
Length = 343
Score = 457 bits (1176), Expect = e-126, Method: Composition-based stats.
Identities = 150/356 (42%), Positives = 213/356 (59%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+DLP +IA P PRDS+RLMV++P I H L FL D ++
Sbjct: 1 MDISDFDYDLPQEQIAQVPAEPRDSSRLMVLNPKERT---IQHHYFYQLEDFLKKGDVLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G R ++ L ++ N W V +P K + G ++ F +
Sbjct: 58 FNDTRVIPARLIGER----EHTGGKVEIFLLHQMDKNHWEVLVKPGKKARIGTVISFGEE 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L +ID+ + G ++ F +G+ E + +GT+PLPPYI D Y
Sbjct: 114 -----LSCEIIDRTDFGGRIVRFIYNGV-FEEILDRLGTMPLPPYIHE----TLEDRERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y +++GS AAPTAGLHFT L+ RL G++ F+TLHVG GTF PV V+ +DH+M
Sbjct: 164 QTVYNRVKGSAAAPTAGLHFTEALMERLREKGVQFGFITLHVGLGTFRPVHVDVVEDHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I TA+ + + K G R++SVGTTS+R LE A GII SG+T+IFI PG
Sbjct: 224 HREFYSIPPETAELVQTAKKEGRRVISVGTTSIRTLEAAVASAGIIAAGSGWTDIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD +++NFHLPKSTL+MLVSAF G + T + Y+ A+ YRF+S+GD ++
Sbjct: 284 YQFKVVDAVITNFHLPKSTLIMLVSAFAGRDFTLEAYRTAVEERYRFFSFGDAMMI 339
>gi|330431785|gb|AEC16844.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Gallibacterium anatis UMN179]
Length = 356
Score = 457 bits (1176), Expect = e-126, Method: Composition-based stats.
Identities = 148/367 (40%), Positives = 208/367 (56%), Gaps = 20/367 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N S H D+ F+N D +V
Sbjct: 1 MRVSDFYFDLPDELIARYPQKERTASRLLKLDGNSG---EFSHHHFKDVLDFVNEGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + S + R SK K+G L
Sbjct: 58 FNNTRVIPARMYGRKSS-----GGKVEVLVERVLDQKSCLAHIRASKAPKEGSELILGED 112
Query: 121 DGQSR--LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ A ++ + ++ L F I G L + +G IPLPPYI RP + D
Sbjct: 113 KLGEGNGVRARMVGRSDS-LFHLQFDIEG-SLLDTLQQIGHIPLPPYI--DRPDEDADQE 168
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y+KI G+VAAPTAGLHF LL+ L + G+K+ FVTLHVGAGTF PV+VE+ +DH
Sbjct: 169 RYQTVYSKIPGAVAAPTAGLHFDEELLAALRAKGVKMAFVTLHVGAGTFQPVRVENIEDH 228
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT------TEDGIINPWSGF 292
MHSE + A+ + K+ G R+++VGTTS+R LE+A +I P+
Sbjct: 229 HMHSEYAEVPQEVVDAVLATKAAGKRVIAVGTTSVRSLESAALAAEEKQSMQLIEPFFAD 288
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T IFI PG +FR VD L++NFHLP+STL+MLVSAF G + + Y++A+ + YRF+SYGD
Sbjct: 289 TAIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYDNIMRAYRNAVENRYRFFSYGD 348
Query: 353 TSLLFQK 359
L +K
Sbjct: 349 AMFLIKK 355
>gi|113969723|ref|YP_733516.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
sp. MR-4]
gi|123130559|sp|Q0HKF8|QUEA_SHESM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|113884407|gb|ABI38459.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Shewanella
sp. MR-4]
Length = 345
Score = 457 bits (1176), Expect = e-126, Method: Composition-based stats.
Identities = 139/360 (38%), Positives = 204/360 (56%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R+++RL+ + N ++D +DL +N D +V
Sbjct: 1 MRVTDFSFDLPDELIARYPMAQRNASRLLTLDGNTGT---LADKQFTDLLGMINPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK K I+H
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERMLDDKRILAHVRSSKSPKVDSIIHL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
E + + + + + +S + + + VG +PLPPYI RP + D Y
Sbjct: 110 --DGGYEMKMAARHDA--LFELELLSDLTILEVLEAVGHMPLPPYI--DRPDEDADKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF +L L + G+ + FVTLHVGAGTF PV+V++ +H M
Sbjct: 164 QTVYNQNPGAVAAPTAGLHFDDAMLDALKAKGVNIAFVTLHVGAGTFQPVRVDNVLEHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFITP 299
HSE + + K+ G R+V+VGTTS+R LE+A +G + +SG T+IFI P
Sbjct: 224 HSEWANVPQDVVDLIAQTKAAGKRVVAVGTTSVRSLESAARASEGELKAFSGDTDIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY+F+ VD +++NFHLP+STL+MLVSAF G + YQHAI+ YRF+SYGD + +K
Sbjct: 284 GYQFQIVDAMITNFHLPESTLIMLVSAFAGFDHVMAAYQHAITQKYRFFSYGDAMFVTKK 343
>gi|229553782|ref|ZP_04442507.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Lactobacillus rhamnosus LMS2-1]
gi|229312856|gb|EEN78829.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Lactobacillus rhamnosus LMS2-1]
gi|259649097|dbj|BAI41259.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase
[Lactobacillus rhamnosus GG]
Length = 361
Score = 457 bits (1176), Expect = e-126, Method: Composition-based stats.
Identities = 140/357 (39%), Positives = 203/357 (56%), Gaps = 17/357 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FD+DLP IA P+ RD++RL+V++ + + D D+ + DA+V
Sbjct: 21 QLSDFDYDLPHELIAQTPLKERDASRLLVLNADTGA---MQDKHFYDILDYFKPGDALVM 77
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L GV+ + L S + W +P++ G ++ F
Sbjct: 78 NDTRVMPARLYGVK----PETGAHMEVLLLNNTSGDDWETLMKPARKAPVGTVIDF---- 129
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G L+ATV + G ++ F GI + +G PLPPYI K D YQ
Sbjct: 130 GDGLLKATVTKELEHGGRMIHFDYDGI-FMEILDKLGETPLPPYIKEK----LEDPEMYQ 184
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T Y+K GS AAPTAGLH+T LL ++ G+K+ ++TLHVG GTF PV E+ + H MH
Sbjct: 185 TVYSKELGSAAAPTAGLHWTKELLQKVQDKGVKLVYLTLHVGLGTFRPVVEENIEAHKMH 244
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPG 300
SE + A LN V+ GGRI++ GTTS+R LE T+ DG I SG+T+IFI PG
Sbjct: 245 SEFYRLTPEAAATLNEVRDNGGRIIATGTTSIRTLEAIGTKFDGAIKADSGWTDIFIKPG 304
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+++ VD ++NFHLPKSTL+MLV+AF G + Y+HAI YRF+S+GD ++
Sbjct: 305 YQWKVVDAFITNFHLPKSTLVMLVAAFTGRDTILNAYKHAIEEKYRFFSFGDAMFIY 361
>gi|197335931|ref|YP_002156798.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
fischeri MJ11]
gi|226713855|sp|B5F9Y4|QUEA_VIBFM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|197317421|gb|ACH66868.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
fischeri MJ11]
Length = 350
Score = 457 bits (1176), Expect = e-126, Method: Composition-based stats.
Identities = 139/363 (38%), Positives = 212/363 (58%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ ++ N ++D +D+ + + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPQPERTASRLLQLNGNSG---ELNDGQFTDILDLVQAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G++ ++ + + +S + R SK K G +L
Sbjct: 58 FNNTRVIPARMFGMKAS-----GGKLEVLVERVLDEHSVLAHVRCSKSPKPGTMLLLGE- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
EA ++ + +T + + S ++ + +G +PLPPYI RP + D Y
Sbjct: 112 --NQEHEAEMVARHDT--LFEIRFTSDKKVLDILDEIGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y K G+VAAPTAGLHF + +L ++ + G++ +VTLHVGAGTF PV+V++ +H M
Sbjct: 166 QTVYNKKPGAVAAPTAGLHFDTEILEKMKAKGVEFAYVTLHVGAGTFQPVRVDNILEHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDG----IINPWSGFTNIF 296
HSE + A+N+ K+RGGR+VSVGTTS+R LE+A + P+ T IF
Sbjct: 226 HSEYAEVSQEVIDAINATKARGGRVVSVGTTSVRSLESAAQHALKQGTELAPFFDDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY F+ VD L++NFHLP+STL+MLVSAF G + T K Y+ A+++ YRF+SYGD +
Sbjct: 286 IYPGYEFQVVDALVTNFHLPESTLIMLVSAFAGYDNTMKAYEQAVNNKYRFFSYGDAMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 TKK 348
>gi|213962211|ref|ZP_03390475.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Capnocytophaga sputigena Capno]
gi|213955217|gb|EEB66535.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Capnocytophaga sputigena Capno]
Length = 349
Score = 457 bits (1176), Expect = e-126, Method: Composition-based stats.
Identities = 145/361 (40%), Positives = 200/361 (55%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F+FDLP +A P RD ARLMVVH I L D+ + + D V
Sbjct: 1 MKLSNFNFDLPKELLAEYPSENRDEARLMVVHRKTG---EIEHKLFKDVIDYFDDGDVFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + + +I L +S W V P++ I+ G+ L+F
Sbjct: 58 LNNTKVFPARLYGNK----EKTKAKIEVFLLRELSAEQRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
+ L A VID + L F G E + ++ +G PLP YI RP++ D
Sbjct: 114 K---NAELVAEVIDNTTSRGRTLRFLYDGTYEEFRQHLTELGQTPLPKYI--SRPVEPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ +L+ RL GI VTLHVG GTF PV+VED
Sbjct: 169 EERYQTIYAKHEGAVAAPTAGLHFSKHLMKRLEIKGITFAEVTLHVGLGTFNPVEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I + +N+ K R+ +VGTT +R+LE++ + D +NP+ G+TN F
Sbjct: 229 KHKMDSEEIHIPESQTKIINTAKENKKRVCAVGTTVMRVLESSVSSDCFVNPFDGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH PKSTLLM+VSAF G + + Y+ A+ Y+FYSYGD L+
Sbjct: 289 IFPPYDFSVANAMITNFHTPKSTLLMMVSAFAGHDLIMRAYKEAVEQKYKFYSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 L 349
>gi|328957017|ref|YP_004374403.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Carnobacterium sp. 17-4]
gi|328673341|gb|AEB29387.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Carnobacterium sp. 17-4]
Length = 345
Score = 457 bits (1176), Expect = e-126, Method: Composition-based stats.
Identities = 155/357 (43%), Positives = 214/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ K+FDFDLP IA P+ R S++L++++ + D +D+ LN DA+V
Sbjct: 4 LTTKDFDFDLPEELIAQTPLENRSSSKLLILNKETG---EVDDKHFTDILEELNEGDALV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+GV+ + L + W +P+K G ++ F
Sbjct: 61 MNDTRVLPARLHGVK----PETGAHLEILLLKNTEKDQWETLVKPAKKATVGTVISF--- 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV ++ N G ++ FS GI LE + +G +PLPPYI + D Y
Sbjct: 114 -GDGRLTATVTEELNHGGRIIDFSYDGIFLE-VLESLGEMPLPPYIKER----LEDSERY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ S G+K+ F+TLHVG GTF PV V+ +DH M
Sbjct: 168 QTVYAKENGSAAAPTAGLHFTEELLEKIKSKGVKLIFLTLHVGLGTFRPVSVDSIEDHEM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + +A L +V++ GGRIV+VGTTS+R LET T+ +G I SG+T+IFI+P
Sbjct: 228 HSEFYRLTEESATELTAVRNNGGRIVAVGTTSIRTLETIGTKFNGEIKADSGWTDIFISP 287
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+ VD +NFHLPKSTL+MLVSAF G E YQHA+ YRF+S+GD +
Sbjct: 288 GYTFKVVDAFSTNFHLPKSTLVMLVSAFAGREHVLAAYQHAVDEKYRFFSFGDAMFV 344
>gi|282919414|ref|ZP_06327149.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus C427]
gi|282317224|gb|EFB47598.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus C427]
Length = 341
Score = 457 bits (1176), Expect = e-126, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 209/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EFD+DLP S IA P+ RD +RL+V+ + D+ + D +V
Sbjct: 1 MNIEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETG---EMKHLHFKDIIEYFRPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 58 LNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI + D Y
Sbjct: 111 -GNDKIIAECIKEMDQGGRIMRLHYEGI-LQERLDELGEMPLPPYIKERLD----DPDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + FVTLHVG GTF PV V+D +DH M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTDELLTEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN KS+G RI+SVGTTS R LET + SG+TNIFI PG
Sbjct: 225 HSEYYQMTQETADLLNDTKSKGHRIISVGTTSTRTLETIRRDHDKFVETSGWTNIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 285 FDFKAIDGQITNFHLPKSTLVMLVSAFSTRENVLNAYKTAVNLEYRFFSFGDAMLII 341
>gi|256545114|ref|ZP_05472480.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Anaerococcus vaginalis ATCC 51170]
gi|256399155|gb|EEU12766.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Anaerococcus vaginalis ATCC 51170]
Length = 340
Score = 457 bits (1176), Expect = e-126, Method: Composition-based stats.
Identities = 145/356 (40%), Positives = 194/356 (54%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++FD++LP IA P RD +RLMVV D D+ +LN D +V
Sbjct: 1 MRTEDFDYNLPEELIAQHPADKRDFSRLMVVDRKTGQR---EDKHFYDIIDYLNEGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G R E L + + W V RP K +K G F +
Sbjct: 58 MNDTRVIPARLFGHREEKEEEIE----VFLLENIEDDKWEVLVRPGKKMKIGTKCIFSDE 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L VID G ++ F GI + + +G +PLPPYI K +D Y
Sbjct: 114 -----LSLEVIDIKEDGNRVIEFFYDGI-FQEILDRLGNMPLPPYIKEK----LKDKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GSVAAPTAGLHFT LL ++ G+K+ ++TL+VG GTF PVKV+D +H M
Sbjct: 164 QTVYSKNPGSVAAPTAGLHFTKELLKKIEEKGVKLAYITLNVGLGTFRPVKVDDVKNHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I TA +N K RI+S GTT+ R LE+ ++G I SG+T+IFI PG
Sbjct: 224 HSEFYQISKETADLINETKKNNKRIISTGTTTTRTLESVYKKNGQIKEDSGWTDIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ F +D ++NFHLPKSTL+MLVSA E Y+ A+ YRF+S+GD L
Sbjct: 284 FEFNVIDCQITNFHLPKSTLIMLVSALASKEIILDAYKDAVDKKYRFFSFGDAMFL 339
>gi|117919882|ref|YP_869074.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
sp. ANA-3]
gi|166217771|sp|A0KV49|QUEA_SHESA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|117612214|gb|ABK47668.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Shewanella
sp. ANA-3]
Length = 345
Score = 457 bits (1176), Expect = e-126, Method: Composition-based stats.
Identities = 144/361 (39%), Positives = 206/361 (57%), Gaps = 20/361 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R+++RL+ + N ++D +DL +N D +V
Sbjct: 1 MRVTDFSFDLPDELIARYPMAQRNASRLLTLDGNTGT---LADKQFTDLLGMINPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK K I+H
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERMLDDKRILAHVRSSKSPKVDSIIHL--- 109
Query: 121 DGQSRLE-ATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
DG ++ A D E+L S + + + VG +PLPPYI RP + D
Sbjct: 110 DGGYEMKMAARYDALFELELL-----SDLTILEVLEAVGHMPLPPYI--DRPDEDADKER 162
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y + G+VAAPTAGLHF +L L + G+ + FVTLHVGAGTF PV+V++ +H
Sbjct: 163 YQTVYNQNPGAVAAPTAGLHFDDAMLDALKAKGVNIAFVTLHVGAGTFQPVRVDNVLEHK 222
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFIT 298
MHSE + + K+ G R+V+VGTTS+R LE+A +G + +SG T+IFI
Sbjct: 223 MHSEWANVPQDVVDLIAQTKAAGKRVVAVGTTSVRSLESAARASEGELKAFSGDTDIFIY 282
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY+F+ VD +++NFHLP+STL+MLVSAF G + YQHAI+ YRF+SYGD + +
Sbjct: 283 PGYQFQIVDAMITNFHLPESTLIMLVSAFAGFDHVMAAYQHAITQKYRFFSYGDAMFVTK 342
Query: 359 K 359
K
Sbjct: 343 K 343
>gi|24379107|ref|NP_721062.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus mutans UA159]
gi|46577053|sp|Q8DV72|QUEA_STRMU RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|24377009|gb|AAN58368.1|AE014907_5 putative S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Streptococcus mutans UA159]
Length = 342
Score = 457 bits (1176), Expect = e-126, Method: Composition-based stats.
Identities = 155/357 (43%), Positives = 215/357 (60%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF+LP + IA P+ RDS++L+VV + D + LNS DA+V
Sbjct: 1 MNTSDFDFNLPEALIAQTPLKKRDSSKLLVVDHQKKT---MKDTHFDHIIDELNSGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G + + L + + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLHGEK----TVTHGHVELLLLKNIQGDQWEVLAKPAKRLKVGSHISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A + ++ + G ++ FS GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLKAIIKEELDHGGRIVEFSYEGIFLE-VLESLGEMPLPPYIHEK----LEDRDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LLS++ + G+K+ ++TLHVG GTF PV V++ ++H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEELLSKIEAKGVKLVYLTLHVGLGTFRPVSVDNVEEHQM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ GGRIV+VGTTS+R LET + G I SG+TNIFI P
Sbjct: 225 HSEFYSLSPEAAQTLKDVKANGGRIVAVGTTSIRTLETIGNKFAGQIEADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ VD +NFHLPKSTL+MLVSAF G + Y+HA+ YRF+S+GD +
Sbjct: 285 GYQFKIVDAFSTNFHLPKSTLVMLVSAFAGRDFILDAYKHAVDKHYRFFSFGDAMFV 341
>gi|199598074|ref|ZP_03211497.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Lactobacillus rhamnosus HN001]
gi|258507749|ref|YP_003170500.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus rhamnosus GG]
gi|258538939|ref|YP_003173438.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus rhamnosus Lc 705]
gi|199591000|gb|EDY99083.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Lactobacillus rhamnosus HN001]
gi|257147676|emb|CAR86649.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus rhamnosus GG]
gi|257150615|emb|CAR89587.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus rhamnosus Lc 705]
Length = 356
Score = 457 bits (1176), Expect = e-126, Method: Composition-based stats.
Identities = 140/357 (39%), Positives = 203/357 (56%), Gaps = 17/357 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FD+DLP IA P+ RD++RL+V++ + + D D+ + DA+V
Sbjct: 16 QLSDFDYDLPHELIAQTPLKERDASRLLVLNADTGA---MQDKHFYDILDYFKPGDALVM 72
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L GV+ + L S + W +P++ G ++ F
Sbjct: 73 NDTRVMPARLYGVK----PETGAHMEVLLLNNTSGDDWETLMKPARKAPVGTVIDF---- 124
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G L+ATV + G ++ F GI + +G PLPPYI K D YQ
Sbjct: 125 GDGLLKATVTKELEHGGRMIHFDYDGI-FMEILDKLGETPLPPYIKEK----LEDPEMYQ 179
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T Y+K GS AAPTAGLH+T LL ++ G+K+ ++TLHVG GTF PV E+ + H MH
Sbjct: 180 TVYSKELGSAAAPTAGLHWTKELLQKVQDKGVKLVYLTLHVGLGTFRPVVEENIEAHKMH 239
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPG 300
SE + A LN V+ GGRI++ GTTS+R LE T+ DG I SG+T+IFI PG
Sbjct: 240 SEFYRLTPEAAATLNEVRDNGGRIIATGTTSIRTLEAIGTKFDGAIKADSGWTDIFIKPG 299
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+++ VD ++NFHLPKSTL+MLV+AF G + Y+HAI YRF+S+GD ++
Sbjct: 300 YQWKVVDAFITNFHLPKSTLVMLVAAFTGRDTILNAYKHAIEEKYRFFSFGDAMFIY 356
>gi|59712577|ref|YP_205353.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
fischeri ES114]
gi|75431538|sp|Q5E3D1|QUEA_VIBF1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|59480678|gb|AAW86465.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
fischeri ES114]
Length = 350
Score = 457 bits (1176), Expect = e-126, Method: Composition-based stats.
Identities = 140/363 (38%), Positives = 212/363 (58%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ ++ N ++D +D+ + + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPQPERTASRLLQLNGNSG---ELNDGQFTDILDLVQAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G++ ++ + + +S + R SK K G +L
Sbjct: 58 FNNTRVIPARMFGMKAS-----GGKLEVLVERVLDEHSVLAHVRCSKSPKPGTMLLLGE- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
EA ++ + +T + + S ++ + +G +PLPPYI RP + D Y
Sbjct: 112 --NQEHEAEMVARHDT--LFEIRFTSDKKVLDILDEIGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y K G+VAAPTAGLHF + +L ++ + G++ +VTLHVGAGTF PV+V++ +H M
Sbjct: 166 QTVYNKKPGAVAAPTAGLHFDTEILEKMKAKGVEFAYVTLHVGAGTFQPVRVDNILEHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDG----IINPWSGFTNIF 296
HSE + A+N+ K+RGGR+VSVGTTS+R LE+A + P+ T IF
Sbjct: 226 HSEYAEVSQEVIDAINATKARGGRVVSVGTTSVRSLESAAQHALKQGTELAPFFDDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY F+ VD L++NFHLP+STL+MLVSAF G E T K Y+ A+++ YRF+SYGD +
Sbjct: 286 IYPGYEFQVVDALVTNFHLPESTLIMLVSAFAGYENTMKAYEQAVNNKYRFFSYGDAMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 TKK 348
>gi|251782850|ref|YP_002997153.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus dysgalactiae subsp. equisimilis GGS_124]
gi|242391480|dbj|BAH81939.1| S-adenosylmethionine/tRNA ribosyltransferase-isomerase
[Streptococcus dysgalactiae subsp. equisimilis GGS_124]
Length = 342
Score = 457 bits (1176), Expect = e-126, Method: Composition-based stats.
Identities = 153/357 (42%), Positives = 212/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP IA P+ RDS++L+++ ++ D + LN DA+V
Sbjct: 1 MNTNDFDFDLPEELIAQTPLEKRDSSKLLIIDHE---QKIMIDSHFDHIIDQLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLYGEK----PDTHGHVELLLLKNTHGDQWEVLAKPAKRLKVGSQVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL AT++++ G ++ F+ GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATIVEELEHGGRIVEFNYEGIFLE-VLESLGEMPLPPYIHEKLD----DAERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT++LLS++ + G+ + ++TLHVG GTF PV V++ DDH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTTDLLSKIDAKGVHLVYLTLHVGLGTFRPVSVDNLDDHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK GG +V+VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYSLSEEAAQTLRDVKKAGGHVVAVGTTSIRTLETIGSKFQGDIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ VD +NFHLPKSTL+MLVSAF G + Y+HA+ YRF+S+GD +
Sbjct: 285 GYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLDAYKHAVDEKYRFFSFGDAMFV 341
>gi|114046952|ref|YP_737502.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
sp. MR-7]
gi|122944787|sp|Q0HWR0|QUEA_SHESR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|113888394|gb|ABI42445.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Shewanella
sp. MR-7]
Length = 345
Score = 457 bits (1175), Expect = e-126, Method: Composition-based stats.
Identities = 139/360 (38%), Positives = 204/360 (56%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R+++RL+ + N ++D +DL +N D +V
Sbjct: 1 MRVTDFSFDLPDELIARYPMAQRNASRLLTLDGNTGT---LADKQFTDLLGMINPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK K I+H
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERMLDDKRILAHVRSSKSPKVDSIIHL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
E + + + + + +S + + + VG +PLPPYI RP + D Y
Sbjct: 110 --DGGYEMKMAARHDA--LFELELLSDLTILEVLEAVGHMPLPPYI--DRPDEDADKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF +L L + G+ + FVTLHVGAGTF PV+V++ +H M
Sbjct: 164 QTVYNQNPGAVAAPTAGLHFDDAMLEALKAKGVNIAFVTLHVGAGTFQPVRVDNVLEHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFITP 299
HSE + + K+ G R+V+VGTTS+R LE+A +G + +SG T+IFI P
Sbjct: 224 HSEWANVPQDVVDLIVQTKAAGKRVVAVGTTSVRSLESAARASEGELKAFSGDTDIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY+F+ VD +++NFHLP+STL+MLVSAF G + YQHAI+ YRF+SYGD + +K
Sbjct: 284 GYQFQIVDAMITNFHLPESTLIMLVSAFAGFDHVMAAYQHAITQKYRFFSYGDAMFVTKK 343
>gi|225870087|ref|YP_002746034.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus equi subsp. equi 4047]
gi|225699491|emb|CAW93030.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus equi subsp. equi 4047]
Length = 342
Score = 457 bits (1175), Expect = e-126, Method: Composition-based stats.
Identities = 152/357 (42%), Positives = 210/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF+LP IA P+ RD ++L+++ ++D + L DA+V
Sbjct: 1 MNTNDFDFELPEELIAQTPLEQRDRSKLLIIDHQ---EHTMTDSHFDHIIDQLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + + W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLYGEKM----ETHGHVELLLLKNIQGDQWEVLAKPAKRLKAGAQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A VI + G ++ FS GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLKARVIQELEHGGRIVEFSYDGIFLE-ILETLGEMPLPPYIHEKLA----DAERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTQELLQKIEAKGVHLVYLTLHVGLGTFRPVSVDNIDEHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ GGRI++VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYLLSEEAAQTLRKVKAAGGRIIAVGTTSIRTLETIGSKFQGQILADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ VD +NFHLPKSTL+MLVSAF G + + Y+HAI YRF+S+GD +
Sbjct: 285 GYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYKHAIDEHYRFFSFGDAMFV 341
>gi|153824631|ref|ZP_01977298.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae MZO-2]
gi|149741849|gb|EDM55878.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae MZO-2]
Length = 352
Score = 457 bits (1175), Expect = e-126, Method: Composition-based stats.
Identities = 136/363 (37%), Positives = 209/363 (57%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N ++D D+ F+ D +V
Sbjct: 1 MQVSDFHFELPDELIARYPKAERTASRLLQLDGNSG---QLTDGTFKDVLGFVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + ++ + R SK K G L+
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D A + + + + + + + ++ +G +PLPPYI RP + D Y
Sbjct: 113 D---EFHAVMQARHDA--LFEIRFTAETVVLDILNQIGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G+++ +VTLHVGAGTF PV+VE+ DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDQALLEQIQAKGVELAYVTLHVGAGTFQPVRVENIHDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT---EDG-IINPWSGFTNIF 296
H+E + A+ + K+RGGR+++VGTTS+R LE+A ++G + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAIAATKARGGRVIAVGTTSVRSLESAAQDALKNGTELKPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ YRF+SYGD +
Sbjct: 286 IFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYEHTMAAYEHAVKEQYRFFSYGDAMFI 345
Query: 357 FQK 359
++
Sbjct: 346 RKQ 348
>gi|306833044|ref|ZP_07466176.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus bovis ATCC 700338]
gi|304424943|gb|EFM28077.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus bovis ATCC 700338]
Length = 342
Score = 457 bits (1175), Expect = e-126, Method: Composition-based stats.
Identities = 155/357 (43%), Positives = 214/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF+LP IA P+ RDS++L+V+ + D + LN DA+V
Sbjct: 1 MNTNDFDFNLPEELIAQTPLEKRDSSKLLVIDHKT---HEMVDAHFDHILDELNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + W V A+P+K ++ G + F
Sbjct: 58 MNNTRVLPARLYGEK----PDTHGHVELLLLKNTQGDQWEVLAKPAKRLRVGVKVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+++ + G ++ F+ GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLTATVVEELDHGGRVVEFAYDGIFLE-VLESLGEMPLPPYIHEKLD----DPDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ + G+K+ ++TLHVG GTF PV V++ ++H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTQDLLAKIEAKGVKLVYLTLHVGLGTFRPVSVDNIEEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ GGR+V+VGTTS+R LET ++ +G I SG+TNIFI P
Sbjct: 225 HSEFYTLSEEAAQTLRDVKAAGGRVVAVGTTSIRTLETIGSKFNGDIKADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+ VD +NFHLPKSTL+MLVSAF G E YQHAI YRF+S+GD +
Sbjct: 285 GYEFKVVDAFSTNFHLPKSTLVMLVSAFAGREFVLDAYQHAIDEHYRFFSFGDAMFV 341
>gi|118586983|ref|ZP_01544415.1| S-adenosylmethionine tRNA-ribosyltransferase [Oenococcus oeni ATCC
BAA-1163]
gi|118432605|gb|EAV39339.1| S-adenosylmethionine tRNA-ribosyltransferase [Oenococcus oeni ATCC
BAA-1163]
Length = 359
Score = 457 bits (1175), Expect = e-126, Method: Composition-based stats.
Identities = 138/363 (38%), Positives = 208/363 (57%), Gaps = 19/363 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FD+DLP IA P+ RD++RL++++ D D+ +LN DA+V
Sbjct: 10 TLSDFDYDLPHELIAQTPLKQRDTSRLLLLNAKTGA---YEDKHFYDIIDYLNPGDALVM 66
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NN++VI A+L+G R + + L + + W +P+K G ++ F +++
Sbjct: 67 NNSRVIPARLHGWR----PETKGHVEVLLLRQDHGDVWETLIKPAKKFPVGSVIDFGNEN 122
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
++ + V+ + G + F GI + +G +PLPPYI K +D YQ
Sbjct: 123 -ETIMTGKVVGELEHGGRYVEFQYDGI-FMELLDKLGEMPLPPYIKEK----LKDQERYQ 176
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T Y+KI+GS AAPTAGLH+T LL ++ + GIK +TLHVG GTF PV+ E+ D H MH
Sbjct: 177 TVYSKIEGSAAAPTAGLHWTPELLDKVRAKGIKTIELTLHVGLGTFRPVEEENIDKHKMH 236
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE------DGIINPWSGFTNI 295
SE + A +N V++ GGRIV+ GTT++R LET + G + SG+T+I
Sbjct: 237 SEFYQLSQAAADQINQVRNNGGRIVATGTTTIRTLETIGHKFNGDKYGGNVQADSGWTDI 296
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PG+++ VD ++NFHLPKSTL+MLV+AF G E Y+HAI YRF+S+GD
Sbjct: 297 FIKPGFKWTTVDAFITNFHLPKSTLVMLVAAFTGRENILNAYKHAIQEKYRFFSFGDAMF 356
Query: 356 LFQ 358
+ +
Sbjct: 357 IHK 359
>gi|197104869|ref|YP_002130246.1| S-adenosylmethionine tRNA ribosyltransferase [Phenylobacterium
zucineum HLK1]
gi|238690135|sp|B4R9Q3|QUEA_PHEZH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|196478289|gb|ACG77817.1| S-adenosylmethionine tRNA ribosyltransferase [Phenylobacterium
zucineum HLK1]
Length = 357
Score = 457 bits (1175), Expect = e-126, Method: Composition-based stats.
Identities = 190/362 (52%), Positives = 239/362 (66%), Gaps = 10/362 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IALRP PRD+ARL++V P D V DLP L + D +V
Sbjct: 1 MKLADFDFDLPEEAIALRPANPRDAARLLLVEPGQD----FRDLAVRDLPGLLRAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L GVR +R + TLH R + + W+ + RP K + GD + F
Sbjct: 57 LNDTRVIPARLKGVRTREGSRV--AVEATLHQRKAGHVWTAFMRPGKRLAPGDRVSFGET 114
Query: 121 DGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
D + L+ATV +K GE+ L F +SG +L+ I+ G +PLPPYIA KR D +D
Sbjct: 115 DDRACFLGALDATVKEKGEGGEVTLAFDLSGPDLDAAIAERGAMPLPPYIAAKRAEDEQD 174
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT YA+ GSVAAPTAGLHFT LL+RL G+ VTLHVGAGTF+PVK ED
Sbjct: 175 RADYQTVYAEEDGSVAAPTAGLHFTPELLARLAQAGVTTERVTLHVGAGTFLPVKTEDIS 234
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+H MH+E G +DA TA LN+ ++ GGRIV VGTTSLRLLE+A EDG++ P+ T IF
Sbjct: 235 EHRMHAEWGEVDAATADRLNAARAAGGRIVCVGTTSLRLLESAAGEDGVVRPFRDETAIF 294
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFRA D LM+NFHLPKSTL MLV AF G + + Y+HAI YRFYSYGD+SLL
Sbjct: 295 ITPGYRFRAADGLMTNFHLPKSTLFMLVCAFAGTDTMRAAYRHAIETGYRFYSYGDSSLL 354
Query: 357 FQ 358
++
Sbjct: 355 WR 356
>gi|206969507|ref|ZP_03230461.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH1134]
gi|229180694|ref|ZP_04308034.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus 172560W]
gi|229192629|ref|ZP_04319590.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus ATCC 10876]
gi|206735195|gb|EDZ52363.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus AH1134]
gi|228590936|gb|EEK48794.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus ATCC 10876]
gi|228602839|gb|EEK60320.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus 172560W]
Length = 350
Score = 456 bits (1174), Expect = e-126, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 205/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 1 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 58 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI D Y
Sbjct: 111 -GEGKLKATCTGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKE----TLEDRDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 165 QTVYAKEIGSAAAPTAGLHFTEELLEKLKLKGVQLAFITLHVGLGTFRPVSADTIEEHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT +G + SG+T+IF+ P
Sbjct: 225 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHEGKLCAASGWTDIFMYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 285 GYEFKAIDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGDAMFV 341
>gi|254469478|ref|ZP_05082883.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pseudovibrio sp. JE062]
gi|211961313|gb|EEA96508.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pseudovibrio sp. JE062]
Length = 375
Score = 456 bits (1174), Expect = e-126, Method: Composition-based stats.
Identities = 202/362 (55%), Positives = 256/362 (70%), Gaps = 7/362 (1%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +FDFDLPP IALRP PRDS+RL+VV P+ +++D V LP L DA+V
Sbjct: 15 MLVDDFDFDLPPENIALRPAVPRDSSRLLVVRPD--GEQLLTDDQVLSLPDLLEPGDALV 72
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF-FS 119
FN+TKVI AQL G R + ++ TLH R S W + RP+K +K GD + F F
Sbjct: 73 FNDTKVIPAQLLGFR--TRDGVTAKVGVTLHQRASAKEWRAFVRPAKKLKVGDTVRFAFD 130
Query: 120 QDGQ--SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
++G+ + L A V +K G+IL F S +L+ I+ VG IPLPPYIA KR D +D
Sbjct: 131 EEGKDAAELSAVVTEKSEAGDILFEFDRSAGDLDAAIAQVGHIPLPPYIAAKRAEDDQDR 190
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YAK +G+VAAPTAGLHFT L + L GI+ +FVTLHVGAGTF+PVK + T+D
Sbjct: 191 KDYQTIYAKHEGAVAAPTAGLHFTDRLFAALEERGIEKHFVTLHVGAGTFLPVKADKTED 250
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH E G I TA ALN+V++RG +IVSVGTTSLR+LE++ TEDG+INP S T+IFI
Sbjct: 251 HKMHFEYGEISEETAAALNAVRARGNKIVSVGTTSLRILESSVTEDGVINPISQSTDIFI 310
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGY+F+A+D LM+NFHLP+STL MLVSA G+EE + Y+HAIS YRFYSYGD+SLLF
Sbjct: 311 TPGYQFKAIDALMTNFHLPRSTLFMLVSALSGMEEMRGAYEHAISSGYRFYSYGDSSLLF 370
Query: 358 QK 359
+K
Sbjct: 371 KK 372
>gi|299822808|ref|ZP_07054694.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
grayi DSM 20601]
gi|299816337|gb|EFI83575.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
grayi DSM 20601]
Length = 342
Score = 456 bits (1174), Expect = e-126, Method: Composition-based stats.
Identities = 151/357 (42%), Positives = 212/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R ++RLMV++ I D + + +L DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTASRLMVLNKETGA---IDDKHFASIVDYLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L+G++ + I L + + N W +P+K I+ G + F
Sbjct: 58 LNNTRVLPARLHGLK----DETGAHIEVLLLKQKADNEWETLVKPAKRIRVGQTITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A ++ G +L F GI + +G +PLPPYI + D Y
Sbjct: 111 -GNGELKAVCKEELEHGGRILEFHYEGI-FYEVLENLGEMPLPPYIKEQ----LEDQGRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ G+KV F+TLHVG GTF PV V DTD+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTEALLDQIREKGVKVIFLTLHVGLGTFRPVDVADTDNHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + A L+ VK+ G RI++VGTTS+R LET A+ +G + SG+T+IFI+P
Sbjct: 225 HSEFYRLTKEAAAELSEVKAAGKRIIAVGTTSIRTLETIASRNNGALVEESGWTDIFISP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
G+ F+AVD L++NFHLPKSTL+MLVSA + Y+HA+ + YRF+S+GD +
Sbjct: 285 GFTFQAVDALITNFHLPKSTLIMLVSALSNRDIILHAYRHAVENRYRFFSFGDAMFI 341
>gi|317132377|ref|YP_004091691.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Ethanoligenens harbinense YUAN-3]
gi|315470356|gb|ADU26960.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Ethanoligenens harbinense YUAN-3]
Length = 341
Score = 456 bits (1174), Expect = e-126, Method: Composition-based stats.
Identities = 145/357 (40%), Positives = 197/357 (55%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLPP RIA P+ RD +RLM + + DLP L D ++
Sbjct: 1 MKKSDFYYDLPPERIAQEPLAQRDQSRLMTLDRATGA---VGHRHFYDLPDLLLPGDCLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN++V+ A+L G R + + L + W V RP + + G F
Sbjct: 58 LNNSRVLPARLYGNR----EKTGGRVEFVLLNEKKRDEWEVILRPGRTARVGARYVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A V++ G ++ F G + R I +G +PLP YI + +D Y
Sbjct: 111 -GGGLLKAEVLEIIEDGNRIVRFEHEG-DFYRLIEQIGEMPLPHYITHR----LKDKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL L G+++ +VTLHVG GTF PVK + + H+M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTPELLEHLRQKGVRIGYVTLHVGLGTFRPVKADTIEKHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA + K+ GGR+V VGTTS R LE+ G I G+T+IFI PG
Sbjct: 225 HSEHYELPEETAALIRETKASGGRVVGVGTTSCRTLESVAQRYGEIRAAEGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
++F+ +D L++NFHLP+STL+MLVSAF G E YQ AI+ YRFYS+GD LL+
Sbjct: 285 FQFQVLDALITNFHLPESTLIMLVSAFAGREHVLHAYQEAIAEQYRFYSFGDAMLLY 341
>gi|153802811|ref|ZP_01957397.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae MZO-3]
gi|124121636|gb|EAY40379.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae MZO-3]
Length = 352
Score = 456 bits (1174), Expect = e-126, Method: Composition-based stats.
Identities = 135/363 (37%), Positives = 205/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N + D D+ + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPKAERTASRLLQLDGNSG---QLVDGTFKDVLELVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + ++ + R SK K G L+
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D A + + + + + + + ++ +G +PLPPYI RP + D Y
Sbjct: 113 D---EFHAVMQARHDA--LFEIRFTAETVVLDILNQIGHMPLPPYI--DRPDEETDKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G+++ +VTLHVGAGTF PV+VE+ DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDQALLEQIQAKGVELAYVTLHVGAGTFQPVRVENIHDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT----TEDGIINPWSGFTNIF 296
H+E + A+ + K+RGGR+V+VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAIAATKARGGRVVAVGTTSVRSLESAAQDALQKGSELKPFFGDTKIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ YRF+SYGD +
Sbjct: 286 IFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYEHTMAAYEHAVKEQYRFFSYGDAMFI 345
Query: 357 FQK 359
++
Sbjct: 346 RKQ 348
>gi|88858512|ref|ZP_01133154.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pseudoalteromonas tunicata D2]
gi|88820129|gb|EAR29942.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pseudoalteromonas tunicata D2]
Length = 345
Score = 456 bits (1174), Expect = e-126, Method: Composition-based stats.
Identities = 143/360 (39%), Positives = 209/360 (58%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R S+RL+ ++ N I + SD+ F+ D +V
Sbjct: 1 MRVADFNFDLPDELIARFPKEERTSSRLLKMNGNSG---EIEHCVFSDIINFIGPKDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A++ G + +I + + + + R SK K G +L
Sbjct: 58 FNNTKVIPARMFGQKAS-----GGKIEVLIERVLDEHRVLAHVRASKSPKAGALLIL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
++ EAT++ + GE+ + + + +G +PLPPYI RP + D Y
Sbjct: 110 --ENSAEATMVQRH--GELFELKFHGDNNVLDILENIGHMPLPPYI--DRPDNESDRKRY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF L++ L + G+++ FVTLHVGAGTF PV+ + D+H+M
Sbjct: 164 QTVYGEKPGAVAAPTAGLHFDEKLMADLKAKGVEMAFVTLHVGAGTFQPVRAQTVDEHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFITP 299
HSE + A+ K+RGGR+++VGTTS+R LE+A + G + + G T+IFI P
Sbjct: 224 HSEYIEVPDDVVAAIVKTKARGGRVIAVGTTSVRSLESAAKQSQGELKSYFGDTDIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY+F+ +D +++NFHLP+STL+MLVSAF G E Y AI+ YRF+SYGD L +K
Sbjct: 284 GYQFQVIDAMITNFHLPESTLIMLVSAFAGQENIMNAYNVAIAEQYRFFSYGDAMFLERK 343
>gi|91207391|sp|Q6LU70|QUEA_PHOPR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
Length = 351
Score = 456 bits (1174), Expect = e-126, Method: Composition-based stats.
Identities = 144/363 (39%), Positives = 201/363 (55%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + I D+ S D V
Sbjct: 1 MQVSDFHFDLPNELIARYPQPERTASRLLQLTGETGN---IQHKGFKDVLDLAESGDLFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + S + R SK K G+ L
Sbjct: 58 FNNTRVIPARIFGRKAS-----GGKIEVLVERILDDKSILAHVRASKSPKPGNELLLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D +A +I + +T + + S + + VG +PLPPYI RP + D Y
Sbjct: 113 DD---YQAEMIARHDT--LFEIRFNSDKTVLEILEEVGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y G+VAAPTAGLHF L++ L + G+ FVTLHVGAGTF PV+V++ DDH M
Sbjct: 166 QTVYNAKPGAVAAPTAGLHFDDKLMAALKAKGVNFAFVTLHVGAGTFQPVRVDNIDDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
HSE + A+N+ K+ GGRI++VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HSEYVEVPQDVVDAVNATKANGGRIIAVGTTSVRSLESAAQDAVKKGTELVPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY F+ VD+L++NFHLP+STL+MLVSAF G E T Y A+ + YRF+SYGD+ +
Sbjct: 286 IFPGYEFQLVDVLVTNFHLPESTLIMLVSAFAGYEHTMNAYLQAVDNKYRFFSYGDSMFI 345
Query: 357 FQK 359
++
Sbjct: 346 TRR 348
>gi|297581139|ref|ZP_06943063.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae RC385]
gi|297534455|gb|EFH73292.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae RC385]
Length = 352
Score = 456 bits (1174), Expect = e-126, Method: Composition-based stats.
Identities = 134/363 (36%), Positives = 204/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N + D D+ + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPKAERTASRLLQLDGNSG---QLVDGTFKDVLELVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + ++ + R SK K G L+
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D A + + + + + + + ++ +G +PLPPYI RP + D Y
Sbjct: 113 D---EFHAVMQARHDA--LFEIRFTAETVVLDILNQIGHMPLPPYI--DRPDEEADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G+++ +VTLHVGAGTF PV+VE+ DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDQALLEQIQAKGVELAYVTLHVGAGTFQPVRVENIHDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT----TEDGIINPWSGFTNIF 296
H+E + A+ + K+RGGR+V+VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAIAATKARGGRVVAVGTTSVRSLESAAQDALQKGTELKPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+++ VD L++NFHLP+STL+MLVSAF G E Y+HA+ YRF+SYGD +
Sbjct: 286 IFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYEHIMAAYEHAVKEQYRFFSYGDAMFI 345
Query: 357 FQK 359
++
Sbjct: 346 RKQ 348
>gi|16125834|ref|NP_420398.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Caulobacter
crescentus CB15]
gi|221234595|ref|YP_002517031.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Caulobacter
crescentus NA1000]
gi|21263914|sp|Q9A7Y2|QUEA_CAUCR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|254764271|sp|B8GVF3|QUEA_CAUCN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|13422980|gb|AAK23566.1| S-adenosylmethionine tRNA ribosyltransferase-isomerase [Caulobacter
crescentus CB15]
gi|220963767|gb|ACL95123.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Caulobacter
crescentus NA1000]
Length = 366
Score = 456 bits (1174), Expect = e-126, Method: Composition-based stats.
Identities = 199/368 (54%), Positives = 257/368 (69%), Gaps = 12/368 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP RIALRP PRDSAR +VV P ++DH+VSDLP FL DA+V
Sbjct: 1 MRLSDFDFDLPEDRIALRPAEPRDSARFLVVRPG----QAVADHIVSDLPDFLRPGDALV 56
Query: 61 FNNTKVITAQLNGVRFC----HINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
FN+T+VI A+L+G+R + + TLH R++P+ WS + RP K +K GD +
Sbjct: 57 FNDTRVIPARLSGLREGRTTGGADGTPVAVEATLHRRLAPDRWSAFMRPGKRLKVGDRVA 116
Query: 117 FFSQDGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
F +G+ RL+A + +K + GE++L F +SG +L+ I+ G +PLPPYIA KR
Sbjct: 117 FGGHEGRVGDLGRLDAVIAEKHDGGEVVLAFDLSGPDLDVGIAQHGDMPLPPYIAAKRGE 176
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D RD DYQT YA+ GSVAAPTAGLHFT LL RL + G+ ++FVTLHVGAGTF+PVK
Sbjct: 177 DERDRADYQTVYAREDGSVAAPTAGLHFTPQLLERLKAKGVSLHFVTLHVGAGTFLPVKT 236
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
++ +H MH+E G + A ALN+ ++ GGRIV VGTTSLRLLE+AT EDGI+ P++
Sbjct: 237 DEVSEHRMHAEYGQVTQEIADALNAARAAGGRIVCVGTTSLRLLESATGEDGIVRPFADE 296
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T IFITPGYRFR D+LM+NFHLPKSTL MLVSAF G E + Y+HAI+ YRFYSYGD
Sbjct: 297 TAIFITPGYRFRTADVLMTNFHLPKSTLFMLVSAFAGTEAMRAAYEHAIATGYRFYSYGD 356
Query: 353 TSLLFQKR 360
+SLLF+
Sbjct: 357 SSLLFKDE 364
>gi|227432397|ref|ZP_03914387.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Leuconostoc mesenteroides subsp. cremoris ATCC 19254]
gi|227351836|gb|EEJ42072.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Leuconostoc mesenteroides subsp. cremoris ATCC 19254]
Length = 377
Score = 456 bits (1174), Expect = e-126, Method: Composition-based stats.
Identities = 141/358 (39%), Positives = 201/358 (56%), Gaps = 13/358 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FD+DLP + IA P+ RD++RL+ ++ D D+ +LN DAIV
Sbjct: 32 TLSDFDYDLPEALIAQTPLKQRDASRLLALNAKTGG---YEDEHFYDILDYLNPGDAIVM 88
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NN++V+ A+L+G R L + + W +P+K G + F
Sbjct: 89 NNSRVLPARLHGAR----PETGGHAEVLLLRQDHGDVWETLVKPAKKSPVGSTIVFGDDI 144
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ ATV+ + G + F GI + +G +PLPPYI K D YQ
Sbjct: 145 ENPIMTATVVGELEHGGRYIEFHYDGI-FMELLDQLGEMPLPPYIKEKLD----DQERYQ 199
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T Y+K+ GS AAPTAGLH+T LL R+ + G+K +TLHVG GTF PV E+ +DH MH
Sbjct: 200 TVYSKVDGSAAAPTAGLHWTPELLDRVRAKGVKTVELTLHVGLGTFRPVDEENIEDHKMH 259
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPG 300
SE + A LNSV+ GGRI++ GTTS+R LET T+ +G + SG+T+IFI PG
Sbjct: 260 SEFYQLSQEAADELNSVRKHGGRIIATGTTSIRTLETIGTKFNGDLTADSGWTDIFIKPG 319
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y + VD ++NFHLPKSTL+MLV+AF G + Y+HA+ YRF+S+GD + +
Sbjct: 320 YNWTVVDAFITNFHLPKSTLVMLVAAFTGRDNILNAYKHAVDDQYRFFSFGDAMFIHK 377
>gi|229105056|ref|ZP_04235708.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock3-28]
gi|228678366|gb|EEL32591.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock3-28]
Length = 354
Score = 456 bits (1174), Expect = e-126, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 204/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ D +V
Sbjct: 5 MDINLFDFHLPEELIAQVPLEDRETSRLMVLDRETGD---IEHKHFTDILSYLHEGDCLV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L+GV+ I L + + W +P+K +K+G ++ F
Sbjct: 62 LNETKVMPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF--- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +L+AT + G L FS GI + +G +PLPPYI D Y
Sbjct: 115 -GEGKLKATCTGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKE----TLEDRDRY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H M
Sbjct: 169 QTVYAKEIGSAAAPTAGLHFTEELLEKLKKKGVQLAFITLHVGLGTFRPVSADTIEEHHM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA LN VK GGRI++VGTTS R LET AT G + SG+T+IF+ P
Sbjct: 229 HAEYYHMSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHSGKLCAASGWTDIFMYP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 289 GYEFKAIDGLITNFHLPKSTLIMLVSAFSNRDNVLHAYNEAVKEKYRFFSFGDAMFV 345
>gi|261346393|ref|ZP_05974037.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Providencia
rustigianii DSM 4541]
gi|282565711|gb|EFB71246.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Providencia
rustigianii DSM 4541]
Length = 358
Score = 456 bits (1174), Expect = e-126, Method: Composition-based stats.
Identities = 140/360 (38%), Positives = 206/360 (57%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R S RL+ + ++ + +D+ L D +V
Sbjct: 1 MRVSDFTFELPEELIAHYPQAERSSCRLLSLDGATG---QLTHGVFTDILEKLEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDEHRVLAHVRASKAPKEGAALLLGED 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT++ + G + + ++ ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SVNATMVARH--GALFELRFDDARDVLSILNQIGHMPLPPYI--DRPDEESDKELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL L GI++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSQRPGAVAAPTAGLHFDEPLLEALRQKGIEMAFVTLHVGAGTFQPVRVDSIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++D +I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLACKARGNRVIAVGTTSVRSLESAAKASQDALIAPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY+++ VD L++NFHLP+STL+MLVSAF G + T + YQ A+ YRF+SYGD +
Sbjct: 286 PGYQYQVVDALITNFHLPESTLIMLVSAFAGYKNTMQAYQEAVEQKYRFFSYGDAMFITP 345
>gi|153829413|ref|ZP_01982080.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae 623-39]
gi|148875133|gb|EDL73268.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae 623-39]
Length = 352
Score = 456 bits (1173), Expect = e-126, Method: Composition-based stats.
Identities = 135/363 (37%), Positives = 205/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N + D D+ + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPKAERTASRLLQLDGNSG---QLVDGTFKDVLELVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + ++ + R SK K G L+
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D A + + + + + + + ++ +G +PLPPYI RP + D Y
Sbjct: 113 D---EFHAVMQARHDA--LFEIRFTAETVVLDILNQIGHMPLPPYI--DRPDEETDKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G+++ +VTLHVGAGTF PV+VE+ DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDQALLEQIQAKGVELAYVTLHVGAGTFQPVRVENIHDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT----TEDGIINPWSGFTNIF 296
H+E + A+ + K+RGGR+V+VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAIAATKARGGRVVAVGTTSVRSLESAAQDALQKGSELKPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ YRF+SYGD +
Sbjct: 286 IFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYEHTMAAYEHAVKEQYRFFSYGDAMFI 345
Query: 357 FQK 359
++
Sbjct: 346 RKQ 348
>gi|315180997|gb|ADT87911.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
furnissii NCTC 11218]
Length = 352
Score = 456 bits (1173), Expect = e-126, Method: Composition-based stats.
Identities = 135/363 (37%), Positives = 203/363 (55%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P+ R ++RL+ + N + D D+ + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPMAERTASRLLQLDGNTG---ELVDGTFKDVLNCVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + +S + R SK K G L
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKLEVLVERMLDEHSILAHVRCSKPPKPGTELFLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D A + + + + + + + ++ +G +PLPPYI RP + D Y
Sbjct: 113 D---EFHAVMDARHDA--LFEIRFTAETVVLDILNQIGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G++ +VTLHVGAGTF PV+V++ +DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDQALLEQIKAKGVEFAYVTLHVGAGTFQPVRVDNINDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + A+ + K+RGGRI++VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAIAATKARGGRIIAVGTTSVRSLESAAQDALKKGTELVPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY ++ VD L++NFHLP+STL+MLVSAF G E T Y HA+ YRF+SYGD +
Sbjct: 286 IYPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYEHTMAAYDHAVKQQYRFFSYGDAMFI 345
Query: 357 FQK 359
++
Sbjct: 346 RKR 348
>gi|283770714|ref|ZP_06343606.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus H19]
gi|283460861|gb|EFC07951.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus H19]
Length = 341
Score = 456 bits (1173), Expect = e-126, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 209/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EFD+DLP S IA P+ RD +RL+V+ + D+ + D +V
Sbjct: 1 MNIEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETGEMKYLH---FKDIIEYFRPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 58 LNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI + D Y
Sbjct: 111 -GNGKIIAECIKEMDQGGRIMRLHYEGI-LQERLDELGEMPLPPYIKERLD----DPDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + FVTLHVG GTF PV V+D +DH M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTDELLTEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN KS+G RI+SVGTTS R LET + SG+TNIFI PG
Sbjct: 225 HSEYYQMTQETADLLNDTKSKGHRIISVGTTSTRTLETIRRDHDKFVETSGWTNIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 285 FDFKAIDGQITNFHLPKSTLVMLVSAFSTRENVLNAYKTAVNLEYRFFSFGDAMLII 341
>gi|283769037|ref|ZP_06341943.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bulleidia
extructa W1219]
gi|283104394|gb|EFC05771.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bulleidia
extructa W1219]
Length = 347
Score = 456 bits (1173), Expect = e-126, Method: Composition-based stats.
Identities = 139/355 (39%), Positives = 200/355 (56%), Gaps = 16/355 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+FD++LP IA P+ R ++R+M +H D D+ L D +V
Sbjct: 6 KTSDFDYNLPHELIAQSPLADRSTSRMMWIHKKSQK---YEDKHFYDIVDILKPGDVLVR 62
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNT+VI A+L G++ + L + + W A +KV+K G I+ F
Sbjct: 63 NNTRVIPARLFGIK----EETGAHVELLLLKQKEHDVWECLAGNAKVVKVGSIVSF---- 114
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G +L+A + + G + GI + +G +PLPPYI +K D YQ
Sbjct: 115 GDGQLKAQCLSIGDKGLREMKMLYEGI-FTEILDQLGQVPLPPYIKKKLD----DSERYQ 169
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YAKI GS AAPTAGLHFT + +L++ GI + VTLHVG GTF P+ VE+ DH+MH
Sbjct: 170 TVYAKIDGSAAAPTAGLHFTKEVDQQLLAKGITITEVTLHVGLGTFRPMDVENVHDHVMH 229
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
SE+ + TA LN K G RIV++GTTS+R LE+ G G T +FI PGY
Sbjct: 230 SEVYEMSQETADILNQAKKLGRRIVAIGTTSVRTLESVWNRFGQFQECRGETTLFIYPGY 289
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
++ D++++NFHLPKSTLLM++S+F G E T+++Y HA++ YRF+S+GD L+
Sbjct: 290 QWHTCDVMLTNFHLPKSTLLMMISSFMGYELTQEVYHHAVNEKYRFFSFGDCMLI 344
>gi|326693303|ref|ZP_08230308.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Leuconostoc
argentinum KCTC 3773]
Length = 353
Score = 456 bits (1173), Expect = e-126, Method: Composition-based stats.
Identities = 140/358 (39%), Positives = 205/358 (57%), Gaps = 13/358 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FD+DLP + IA P+ RD++RL+V+ + D D+ ++ DAIV
Sbjct: 7 QLSDFDYDLPEALIAQTPLKQRDASRLLVLDADTGA---YDDKHFYDILDYVEPGDAIVM 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NN++V+ A+L+G R L + + W +P+K G + F
Sbjct: 64 NNSRVLPARLHGAR----PETGGHAEVLLLRQDHGDVWETLVKPAKKSPIGSTIVFGDDI 119
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ ATV+ + G + F GI + +G +PLPPYI K D YQ
Sbjct: 120 NNPIMTATVVGELEHGGRYIEFHYDGI-FMELLEKLGEMPLPPYIKEKLD----DQERYQ 174
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T Y+K+ GS AAPTAGLH+TS LL ++ + G+K +TLHVG GTF PV+ E+ +DH MH
Sbjct: 175 TVYSKVDGSAAAPTAGLHWTSELLDKVRAKGVKTVELTLHVGLGTFRPVEEENIEDHKMH 234
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPG 300
SE + A LN V + GGRI++ GTTS+R LET ++ DG + SG+T+IFI PG
Sbjct: 235 SEFYQLTQEAADTLNDVHANGGRIIATGTTSIRTLETIGSKFDGHLQADSGWTDIFIKPG 294
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y++ VD ++NFHLPKSTL+MLV+AF G + K Y+HA++ YRF+S+GD + +
Sbjct: 295 YQWTTVDAFITNFHLPKSTLVMLVAAFTGRDNILKAYEHAVADQYRFFSFGDAMFVKR 352
>gi|314938950|ref|ZP_07846215.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX0133a04]
gi|314948207|ref|ZP_07851601.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX0082]
gi|314951567|ref|ZP_07854613.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX0133A]
gi|313596261|gb|EFR75106.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX0133A]
gi|313641659|gb|EFS06239.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX0133a04]
gi|313645340|gb|EFS09920.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX0082]
Length = 347
Score = 456 bits (1173), Expect = e-126, Method: Composition-based stats.
Identities = 150/357 (42%), Positives = 207/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++FDFDLP IA P+ RD +RL+V+ + D ++ L DA+V
Sbjct: 6 LTTEDFDFDLPEELIAQTPLKDRDHSRLLVLDRKTG---EMEDKHFHEIIEELQPGDALV 62
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L ++W +P+K K G + F
Sbjct: 63 MNNTRVLPARLYGEK----PDTGAHLEVLLLTNTQGDTWETLIKPAKRAKVGTRISF--- 115
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A V ++ G ++ F GI LE + +G +PLPPYI + D Y
Sbjct: 116 -GDGRLQAVVKEELEHGGRIIDFEYEGIFLE-ILESLGEMPLPPYIKER----LEDPDRY 169
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + + G+++ ++TLHVG GTF PV V+ ++H M
Sbjct: 170 QTVYAKENGSAAAPTAGLHFTKELLDEIEAKGVELVYLTLHVGLGTFRPVSVDKIEEHHM 229
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A+ LN V+ GG+IV+VGTTS+R LET T+ +G I SG+T+IFITP
Sbjct: 230 HSEFYRLTEEAAERLNQVRKNGGKIVAVGTTSIRTLETIGTKFNGEIKADSGWTDIFITP 289
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+ V+ +NFHLPKSTL+MLVSAF G E T YQHAI YRF+S+GD +
Sbjct: 290 GYEFKVVEAFSTNFHLPKSTLVMLVSAFAGRELTLSAYQHAIEERYRFFSFGDAMFV 346
>gi|69249043|ref|ZP_00604858.1| Queuosine biosynthesis protein [Enterococcus faecium DO]
gi|257878859|ref|ZP_05658512.1| queuosine biosynthesis protein [Enterococcus faecium 1,230,933]
gi|257881495|ref|ZP_05661148.1| queuosine biosynthesis protein [Enterococcus faecium 1,231,502]
gi|257885767|ref|ZP_05665420.1| queuosine biosynthesis protein [Enterococcus faecium 1,231,501]
gi|257890717|ref|ZP_05670370.1| queuosine biosynthesis protein [Enterococcus faecium 1,231,410]
gi|260558424|ref|ZP_05830620.1| queuosine biosynthesis protein [Enterococcus faecium C68]
gi|261207140|ref|ZP_05921829.1| queuosine biosynthesis protein [Enterococcus faecium TC 6]
gi|289565261|ref|ZP_06445712.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium D344SRF]
gi|293556909|ref|ZP_06675470.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium E1039]
gi|293560279|ref|ZP_06676776.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium E1162]
gi|294615101|ref|ZP_06694987.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium E1636]
gi|294618443|ref|ZP_06698013.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium E1679]
gi|294620892|ref|ZP_06700093.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium U0317]
gi|314943499|ref|ZP_07850266.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX0133C]
gi|314991571|ref|ZP_07857047.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX0133B]
gi|314994904|ref|ZP_07860031.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX0133a01]
gi|68194302|gb|EAN08818.1| Queuosine biosynthesis protein [Enterococcus faecium DO]
gi|257813087|gb|EEV41845.1| queuosine biosynthesis protein [Enterococcus faecium 1,230,933]
gi|257817153|gb|EEV44481.1| queuosine biosynthesis protein [Enterococcus faecium 1,231,502]
gi|257821623|gb|EEV48753.1| queuosine biosynthesis protein [Enterococcus faecium 1,231,501]
gi|257827077|gb|EEV53703.1| queuosine biosynthesis protein [Enterococcus faecium 1,231,410]
gi|260075598|gb|EEW63904.1| queuosine biosynthesis protein [Enterococcus faecium C68]
gi|260078768|gb|EEW66470.1| queuosine biosynthesis protein [Enterococcus faecium TC 6]
gi|289162917|gb|EFD10766.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium D344SRF]
gi|291592043|gb|EFF23666.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium E1636]
gi|291595284|gb|EFF26607.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium E1679]
gi|291599503|gb|EFF30519.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium U0317]
gi|291600993|gb|EFF31284.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium E1039]
gi|291605729|gb|EFF35166.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium E1162]
gi|313590886|gb|EFR69731.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX0133a01]
gi|313593855|gb|EFR72700.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX0133B]
gi|313597871|gb|EFR76716.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX0133C]
Length = 343
Score = 455 bits (1172), Expect = e-126, Method: Composition-based stats.
Identities = 150/357 (42%), Positives = 207/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++FDFDLP IA P+ RD +RL+V+ + D ++ L DA+V
Sbjct: 2 LTTEDFDFDLPEELIAQTPLKDRDHSRLLVLDRKTG---EMEDKHFHEIIEELQPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L ++W +P+K K G + F
Sbjct: 59 MNNTRVLPARLYGEK----PDTGAHLEVLLLTNTQGDTWETLIKPAKRAKVGTRISF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A V ++ G ++ F GI LE + +G +PLPPYI + D Y
Sbjct: 112 -GDGRLQAVVKEELEHGGRIIDFEYEGIFLE-ILESLGEMPLPPYIKER----LEDPDRY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + + G+++ ++TLHVG GTF PV V+ ++H M
Sbjct: 166 QTVYAKENGSAAAPTAGLHFTKELLDEIEAKGVELVYLTLHVGLGTFRPVSVDKIEEHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A+ LN V+ GG+IV+VGTTS+R LET T+ +G I SG+T+IFITP
Sbjct: 226 HSEFYRLTEEAAERLNQVRKNGGKIVAVGTTSIRTLETIGTKFNGEIKADSGWTDIFITP 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+ V+ +NFHLPKSTL+MLVSAF G E T YQHAI YRF+S+GD +
Sbjct: 286 GYEFKVVEAFSTNFHLPKSTLVMLVSAFAGRELTLSAYQHAIEERYRFFSFGDAMFV 342
>gi|229525386|ref|ZP_04414791.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae bv. albensis VL426]
gi|229338967|gb|EEO03984.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae bv. albensis VL426]
Length = 352
Score = 455 bits (1172), Expect = e-126, Method: Composition-based stats.
Identities = 135/363 (37%), Positives = 205/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N + D D+ + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPKAERTASRLLQLDGNSG---QLVDGTFKDVLELVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + ++ + R SK K G L+
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D A + + + + + + + ++ +G +PLPPYI RP + D Y
Sbjct: 113 D---EFHAVMQARHDA--LFEIRFTAETVVLDILNQIGHMPLPPYI--DRPDEETDKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G+++ +VTLHVGAGTF PV+VE+ DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDQVLLEQIQAKGVELAYVTLHVGAGTFQPVRVENIHDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT----TEDGIINPWSGFTNIF 296
H+E + A+ + K+RGGR+V+VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAIAATKARGGRVVAVGTTSVRSLESAAQDALQKGSELKPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ YRF+SYGD +
Sbjct: 286 IFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYEHTMAAYEHAVKEQYRFFSYGDAMFI 345
Query: 357 FQK 359
++
Sbjct: 346 RKQ 348
>gi|295689992|ref|YP_003593685.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Caulobacter
segnis ATCC 21756]
gi|295431895|gb|ADG11067.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Caulobacter
segnis ATCC 21756]
Length = 368
Score = 455 bits (1171), Expect = e-126, Method: Composition-based stats.
Identities = 200/368 (54%), Positives = 257/368 (69%), Gaps = 12/368 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP RIALRP PRD+ARL+VV P ++DH+V +LP FL DA+V
Sbjct: 1 MHLSDFDFDLPEDRIALRPAEPRDAARLLVVRPG----QPLADHVVRELPDFLQPGDAMV 56
Query: 61 FNNTKVITAQLNGVRFC----HINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
FN+T+VI A+L+G+R + + TLH R++P+ WS + RP K +K GD +
Sbjct: 57 FNDTRVIPARLSGLREGRTTGGADGTPVAVEATLHRRLTPDRWSAFMRPGKRLKVGDRVA 116
Query: 117 FFSQDGQS----RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
F +D ++ RL+ATV +K GE++L F +SG +L+ I+ G +PLPPYIA KR
Sbjct: 117 FGGRDDRACALDRLDATVAEKHEGGEVVLAFDLSGPDLDVGIARHGDMPLPPYIAAKRGE 176
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D RD DYQT YA+ GSVAAPTAGLHFT +LL L + G+ +FVTLHVGAGTF+PVK
Sbjct: 177 DERDRADYQTVYAREDGSVAAPTAGLHFTPSLLEALKAKGVSTHFVTLHVGAGTFLPVKT 236
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H MH+E G + A ALN+ ++ GGRI+ VGTTSLRLLE+AT EDG++ P++
Sbjct: 237 DDVSEHKMHAEYGQVTREVADALNAARAAGGRIICVGTTSLRLLESATGEDGVVKPFADE 296
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T IFITPGYRFRA DILM+NFHLPKSTL MLVSAF G E + Y+HAIS YRFYSYGD
Sbjct: 297 TAIFITPGYRFRAADILMTNFHLPKSTLFMLVSAFAGRETMRAAYEHAISTGYRFYSYGD 356
Query: 353 TSLLFQKR 360
SLLF+
Sbjct: 357 GSLLFRAE 364
>gi|172058105|ref|YP_001814565.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Exiguobacterium sibiricum 255-15]
gi|229598027|sp|B1YJR0|QUEA_EXIS2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|171990626|gb|ACB61548.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Exiguobacterium sibiricum 255-15]
Length = 347
Score = 455 bits (1171), Expect = e-126, Method: Composition-based stats.
Identities = 146/360 (40%), Positives = 205/360 (56%), Gaps = 16/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF LP +IA P+ R S++LMVV+ + D+ ++ N+ D +V
Sbjct: 1 MDVNLFDFHLPEEQIAQVPLLDRTSSKLMVVNRETGA---LRHEKFHDIVSYFNAGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L GV+ +I L + S + W A+P+K +K G +L F
Sbjct: 58 INDTKVLPARLFGVK----EETGGKIELLLLKQTSDDVWETLAKPAKRVKPGTVLSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L A ++ + G +L FS +GI + +GT+PLPPYI + D Y
Sbjct: 111 -GDGLLRAECVEALDDGGRILKFSYTGI-FYEVLDQLGTMPLPPYIHEQ----LEDQDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +GS AAPTAGLHFT LL L G+++ +TLHVG GTF PV V+D D H M
Sbjct: 165 QTVYARERGSAAAPTAGLHFTPELLQALTDKGVQLAPLTLHVGLGTFRPVSVDDVDSHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + +A+ L + GGRI++VGTTS R LET + G SG+T+IFI PG
Sbjct: 225 HSEYYELPESSAKILRETRKNGGRIIAVGTTSTRTLETVIRDHGDFVEASGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
+ +D L++NFHLPKSTL+MLVSA E Y+ A++ YRF+S+GD L ++
Sbjct: 285 QEIKGIDGLITNFHLPKSTLIMLVSALSTREHILHAYEEAVAQNYRFFSFGDAMFLTREE 344
>gi|153217324|ref|ZP_01951075.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae 1587]
gi|124113665|gb|EAY32485.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae 1587]
Length = 352
Score = 455 bits (1171), Expect = e-126, Method: Composition-based stats.
Identities = 134/363 (36%), Positives = 205/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N + D D+ + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPKAERTASRLLQLDGNSG---QLVDGTFKDVLELVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + ++ + R SK K G L+
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A + + + + + + + ++ +G +PLPPYI RP + D Y
Sbjct: 113 N---EFHAVMQARHDA--LFEIRFTAETVVLDILNQIGHMPLPPYI--DRPDEETDKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G+++ +VTLHVGAGTF PV+VE+ DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDQALLEQIQAKGVELAYVTLHVGAGTFQPVRVENIHDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT----TEDGIINPWSGFTNIF 296
H+E + A+ + K+RGGR+V+VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAIAATKARGGRVVAVGTTSVRSLESAAQDALQKGSELKPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ YRF+SYGD +
Sbjct: 286 IFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYEHTMAAYEHAVKEQYRFFSYGDAMFI 345
Query: 357 FQK 359
++
Sbjct: 346 RKQ 348
>gi|225868906|ref|YP_002744854.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus equi subsp. zooepidemicus]
gi|225702182|emb|CAW99893.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus equi subsp. zooepidemicus]
Length = 342
Score = 455 bits (1171), Expect = e-126, Method: Composition-based stats.
Identities = 152/357 (42%), Positives = 209/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF+LP IA P+ RD ++L+++ ++D + L DA+V
Sbjct: 1 MNTNDFDFELPEELIAQTPLEQRDRSKLLIIDHQ---EHTMTDSHFDHIIDQLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L + + W V A+P+K +K G + F
Sbjct: 58 MNNTRVLPARLYGEKM----ETHGHVELLLLKNIQGDQWEVLAKPAKRLKAGAQISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A VI + G ++ FS GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGLLKARVIQELEHGGRIVEFSYDGIFLE-ILETLGEMPLPPYIHEKLA----DAERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTQELLQKIEAKGVHLVYLTLHVGLGTFRPVSVDNIDEHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + AQ L VK+ GGRIV+VGTTS+R LET ++ G I SG+TNIFI P
Sbjct: 225 HSEFYLLSEEAAQTLRKVKAAGGRIVAVGTTSIRTLETIGSKFQGQILADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ VD +NFHLPKSTL+MLVSAF G + + Y+HAI YRF+S+GD +
Sbjct: 285 GYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYKHAIDEHYRFFSFGDAMFV 341
>gi|15640758|ref|NP_230388.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae O1 biovar El Tor str. N16961]
gi|121591366|ref|ZP_01678651.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae 2740-80]
gi|153818849|ref|ZP_01971516.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae NCTC 8457]
gi|153822721|ref|ZP_01975388.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae B33]
gi|227080918|ref|YP_002809469.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae M66-2]
gi|229505646|ref|ZP_04395156.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae BX 330286]
gi|229510682|ref|ZP_04400161.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae B33]
gi|229517804|ref|ZP_04407248.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae RC9]
gi|229608664|ref|YP_002879312.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae MJ-1236]
gi|254847876|ref|ZP_05237226.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae MO10]
gi|255744547|ref|ZP_05418498.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholera CIRS 101]
gi|262161319|ref|ZP_06030430.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae INDRE 91/1]
gi|298499127|ref|ZP_07008934.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae MAK 757]
gi|21263923|sp|Q9KTZ1|QUEA_VIBCH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|254764289|sp|C3LSZ2|QUEA_VIBCM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|9655184|gb|AAF93904.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae O1 biovar El Tor str. N16961]
gi|121546782|gb|EAX56952.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae 2740-80]
gi|126510631|gb|EAZ73225.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae NCTC 8457]
gi|126519752|gb|EAZ76975.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae B33]
gi|227008806|gb|ACP05018.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae M66-2]
gi|229344519|gb|EEO09493.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae RC9]
gi|229350647|gb|EEO15588.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae B33]
gi|229357869|gb|EEO22786.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae BX 330286]
gi|229371319|gb|ACQ61742.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae MJ-1236]
gi|254843581|gb|EET21995.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae MO10]
gi|255737578|gb|EET92972.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholera CIRS 101]
gi|262029069|gb|EEY47722.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae INDRE 91/1]
gi|297543460|gb|EFH79510.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae MAK 757]
Length = 352
Score = 455 bits (1171), Expect = e-126, Method: Composition-based stats.
Identities = 135/363 (37%), Positives = 205/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N + D D+ + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPKAERTASRLLQLDGNSG---QLVDGTFKDVLELVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + ++ + R SK K G L+
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D A + + + + + + + ++ +G +PLPPYI RP + D Y
Sbjct: 113 D---EFHAVMQARHDA--LFEIRFTAETVVLDILNQIGHMPLPPYI--DRPDEEADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G+++ +VTLHVGAGTF PV+VE+ DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDQALLEQIQAKGVELAYVTLHVGAGTFQPVRVENIHDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT----TEDGIINPWSGFTNIF 296
H+E + A+ + K+RGGR+V+VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAITATKARGGRVVAVGTTSVRSLESAAQDALQKGTELKPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ YRF+SYGD +
Sbjct: 286 IFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYEHTMAAYEHAVKEQYRFFSYGDAMFI 345
Query: 357 FQK 359
++
Sbjct: 346 RKQ 348
>gi|262190477|ref|ZP_06048728.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae CT 5369-93]
gi|262033649|gb|EEY52138.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae CT 5369-93]
Length = 352
Score = 455 bits (1171), Expect = e-126, Method: Composition-based stats.
Identities = 135/363 (37%), Positives = 205/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N + D D+ + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPKAERTASRLLQLDGNSG---QLVDGTFKDVLELVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + ++ + R SK K G L+
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D A + + + + + + + ++ +G +PLPPYI RP + D Y
Sbjct: 113 D---EFHAVMQARHDA--LFEIRFTAETVVLDILNQIGHMPLPPYI--DRPDEEADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G+++ +VTLHVGAGTF PV+VE+ DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDQALLEQIQAKGVELAYVTLHVGAGTFQPVRVENIHDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT----TEDGIINPWSGFTNIF 296
H+E + A+ + K+RGGR+V+VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAIAATKARGGRVVAVGTTSVRSLESAAQDALQKGTELKPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ YRF+SYGD +
Sbjct: 286 IFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYEHTMAAYEHAVKEQYRFFSYGDAMFI 345
Query: 357 FQK 359
++
Sbjct: 346 RKQ 348
>gi|121729720|ref|ZP_01682161.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae V52]
gi|147675363|ref|YP_001216225.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae O395]
gi|229513121|ref|ZP_04402587.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae TMA 21]
gi|229530130|ref|ZP_04419520.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae 12129(1)]
gi|254285458|ref|ZP_04960422.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae AM-19226]
gi|262168811|ref|ZP_06036506.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae RC27]
gi|172047703|sp|A5F3H1|QUEA_VIBC3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|121628537|gb|EAX61020.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae V52]
gi|146317246|gb|ABQ21785.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae O395]
gi|150424320|gb|EDN16257.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae AM-19226]
gi|227012563|gb|ACP08773.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae O395]
gi|229333904|gb|EEN99390.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae 12129(1)]
gi|229350014|gb|EEO14968.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae TMA 21]
gi|262022929|gb|EEY41635.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae RC27]
Length = 352
Score = 455 bits (1171), Expect = e-126, Method: Composition-based stats.
Identities = 135/363 (37%), Positives = 205/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N + D D+ + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPKAERTASRLLQLDGNSG---QLVDGTFKDVLELVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + ++ + R SK K G L+
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D A + + + + + + + ++ +G +PLPPYI RP + D Y
Sbjct: 113 D---EFHAVMQARHDA--LFEIRFTAETVVLDILNQIGHMPLPPYI--DRPDEETDKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G+++ +VTLHVGAGTF PV+VE+ DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDQALLEQIQAKGVELAYVTLHVGAGTFQPVRVENIHDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT----TEDGIINPWSGFTNIF 296
H+E + A+ + K+RGGR+V+VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAIAATKARGGRVVAVGTTSVRSLESAAQDALQKGTELKPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ YRF+SYGD +
Sbjct: 286 IFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYEHTMAAYEHAVKEQYRFFSYGDAMFI 345
Query: 357 FQK 359
++
Sbjct: 346 RKQ 348
>gi|71152934|sp|Q8CS92|QUEA_STAES RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|329724657|gb|EGG61163.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus epidermidis VCU144]
gi|329733752|gb|EGG70078.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus epidermidis VCU045]
gi|329737099|gb|EGG73353.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus epidermidis VCU028]
Length = 341
Score = 455 bits (1171), Expect = e-126, Method: Composition-based stats.
Identities = 143/357 (40%), Positives = 208/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++FD+ LP S IA P+ RD +RL+V+ + ++ D+ + D +V
Sbjct: 1 MNIEDFDYHLPESLIAQTPLKNRDQSRLLVLSKDTG---ELTHLHFRDVIHYFEPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + ++ N W V +P+K IKKG L+F
Sbjct: 58 LNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKKGHRLNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++ A I++ G ++ GI L+ ++ +G +PLPPYI + D Y
Sbjct: 111 -GDGKIVAECIEELEQGGRIMRLHYEGI-LQERLDELGEMPLPPYIKERLD----DPDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ G+ + F+TLHVG GTF PV VE+ DDH M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTDDLLNKIKQKGVHIAFITLHVGLGTFRPVSVENIDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN K G R++SVGTTS R LET + SG+T+IFI PG
Sbjct: 225 HSEYYQMTQETADLLNKTKESGKRVISVGTTSTRTLETIRRDHPQFVATSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD L+
Sbjct: 285 FEFKAIDGLITNFHLPKSTLVMLVSAFSNKKYILNAYHKAVEMEYRFFSFGDAMLII 341
>gi|212709159|ref|ZP_03317287.1| hypothetical protein PROVALCAL_00192 [Providencia alcalifaciens DSM
30120]
gi|212688071|gb|EEB47599.1| hypothetical protein PROVALCAL_00192 [Providencia alcalifaciens DSM
30120]
Length = 360
Score = 455 bits (1171), Expect = e-126, Method: Composition-based stats.
Identities = 136/360 (37%), Positives = 205/360 (56%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R S RL+ + ++ + +D+ L D +V
Sbjct: 1 MRVSDFTFELPEELIAHYPQAERSSCRLLGLDGATG---QLTHGVFTDILEKLEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLIERMLDEHRVLAHVRASKAPKEGAALLLGED 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT++ + G + + ++ ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SVNATMVARH--GALFELRFDDARDVLSILNQIGHMPLPPYI--DRPDEESDKELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL L G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSQRPGAVAAPTAGLHFDEPLLDALRQKGVEMAFVTLHVGAGTFQPVRVDSIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A +++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLACKARGNRVIAVGTTSVRSLESAAKASQNALIAPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ +D L++NFHLP+STL+MLVSAF G + T + Y+ A+ YRF+SYGD +
Sbjct: 286 PGYEYQVIDALITNFHLPESTLIMLVSAFAGYQNTMRAYKEAVEQKYRFFSYGDAMFITP 345
>gi|295096812|emb|CBK85902.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterobacter cloacae subsp. cloacae NCTC 9394]
Length = 356
Score = 455 bits (1170), Expect = e-126, Method: Composition-based stats.
Identities = 142/359 (39%), Positives = 206/359 (57%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVADFSFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++AT+ + + + V + ++ +G +PLPPYI +RP + D Y
Sbjct: 113 E---SIKATMTARHDA--LFEVEFNDERTVLDILNAIGHMPLPPYI--ERPDEEADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + GI++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSQKPGAVAAPTAGLHFDEPLLEKLRAKGIEMAFVTLHVGAGTFQPVRVDSIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+V+VGTTS+R LE+A + +I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLAAKARGNRVVAVGTTSVRSLESAAQAAKSELIEPFFGDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGYQYKVIDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKSAVEQKYRFFSYGDAMFIT 344
>gi|319896582|ref|YP_004134775.1| s-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae F3031]
gi|301168885|emb|CBW28479.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae 10810]
gi|317432084|emb|CBY80434.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae F3031]
Length = 363
Score = 455 bits (1170), Expect = e-126, Method: Composition-based stats.
Identities = 138/365 (37%), Positives = 202/365 (55%), Gaps = 17/365 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R S RL+ ++ I SD+ ++ D ++
Sbjct: 1 MRVSDFNFDLPDELIARYPKTDRVSCRLLQLNGENG---EIFHRTFSDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKIEVLVERMLDEHRFLAHIRSSKSPKEGAELFLGED 112
Query: 121 D-GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G++ V+ ++ + S L + +G +PLPPYI RP + D
Sbjct: 113 KLGENNGIKAVMKARHSSLFEVELSDKSTALLDVLQTIGHMPLPPYI--DRPDEEADKEC 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y+K+ G+VAAPTAGLHF LL +L G+ FVTLHVGAGTF PV+VE+ +DH+
Sbjct: 171 YQTVYSKVPGAVAAPTAGLHFDDPLLEKLKKKGVNFEFVTLHVGAGTFQPVRVENIEDHV 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT------TEDGIINPWSGFT 293
MH+E + A+ + K G R+++VGTTS+R +E+A +I P+ T
Sbjct: 231 MHAEYVEVSQEVCNAIIATKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSDT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + T Y+HA+ YRF+SYGD
Sbjct: 291 SIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKHAVQEKYRFFSYGDA 350
Query: 354 SLLFQ 358
+ +
Sbjct: 351 MFINK 355
>gi|262048629|ref|ZP_06021512.1| S-adenosylmethionine tRNA ribosyltransferase [Staphylococcus aureus
D30]
gi|259163276|gb|EEW47835.1| S-adenosylmethionine tRNA ribosyltransferase [Staphylococcus aureus
D30]
Length = 341
Score = 455 bits (1170), Expect = e-126, Method: Composition-based stats.
Identities = 146/357 (40%), Positives = 207/357 (57%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EFD+DLP S IA P+ RD + L+V+ + D+ + D +V
Sbjct: 1 MNIEEFDYDLPESLIAQTPLKDRDHSSLLVMDRETG---EMKHLHFKDIIEYFRPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 58 LNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI + D Y
Sbjct: 111 -GNGKIIAECIKEMDQGGRIMRLHYEGI-LQERLDELGEMPLPPYIKERLD----DPDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + + G+ + FVTLHVG GTF PV V+D +DH M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTDELLIEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN KS+G RI+SVGTTS R LET + SG+TNIFI PG
Sbjct: 225 HSEYYQMTQETADLLNDTKSKGHRIISVGTTSTRTLETIRRDHDKFVETSGWTNIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 285 FDFKAIDGQITNFHLPKSTLVMLVSAFSSRENVLNAYKTAVNLEYRFFSFGDAMLII 341
>gi|89094745|ref|ZP_01167680.1| putative S-adenosylmethionine:tRNAribosyltransferase-isomerase
[Oceanospirillum sp. MED92]
gi|89080999|gb|EAR60236.1| putative S-adenosylmethionine:tRNAribosyltransferase-isomerase
[Oceanospirillum sp. MED92]
Length = 350
Score = 455 bits (1170), Expect = e-126, Method: Composition-based stats.
Identities = 140/359 (38%), Positives = 205/359 (57%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK+F FDLP IA P+ R ++RL+ V V+ +D+ + D ++
Sbjct: 1 MQVKDFHFDLPEELIASFPLEERSASRLLSVDGESG---VLKHGCFTDVLDLIQPGDLMI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + ++ + + + R S+ K+G L
Sbjct: 58 FNDTRVIPARLFGQKES-----GGKVEVLVERMLDEKRALAHVRSSRSPKEGSKLLL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ +EA ++ + L F I G L + G +PLPPY+ KR + D Y
Sbjct: 110 --EGGIEAEMVGRHEN-LFELRFHIEG-NLVDALETHGHMPLPPYM--KREDQSSDRERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y K G+VAAPTAGLHF LL++L G++ FVTLHVGAGTF PVKV++ D+H+M
Sbjct: 164 QTVYNKKPGAVAAPTAGLHFDDALLAKLDEKGVQRAFVTLHVGAGTFQPVKVDNIDEHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + + ++ G R+++VGTTS+R LE+A ++ G I P+ G ++IFI PG
Sbjct: 224 HSEYIEVSEEVCELIKQTRANGKRVIAVGTTSVRSLESA-SQKGEIAPFFGDSDIFIFPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
Y F++VD +++NFHLP+STLLMLVSAF G E Y+ A+ YRF+SYGD L +K
Sbjct: 283 YEFKSVDAMITNFHLPESTLLMLVSAFSGYENMMTAYREAVEQKYRFFSYGDAMYLTRK 341
>gi|148827384|ref|YP_001292137.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae PittGG]
gi|166216725|sp|A5UG48|QUEA_HAEIG RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|148718626|gb|ABQ99753.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae PittGG]
Length = 363
Score = 455 bits (1170), Expect = e-126, Method: Composition-based stats.
Identities = 139/365 (38%), Positives = 204/365 (55%), Gaps = 17/365 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R S RL+ ++ I SD+ ++ D ++
Sbjct: 1 MRVSDFNFDLPDELIARYPKTDRVSCRLLQLNGENG---EIFHRTFSDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKIEVLVERMLDEHRFLAHIRSSKSPKEGAELFLGED 112
Query: 121 D-GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G++ V+ ++ + S L + +G +PLPPYI RP + D
Sbjct: 113 KLGENNGIKAVMKARHSSLFEVELSDKSTALLDVLQTIGHMPLPPYI--DRPDEEADKEC 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y+K+ G+VAAPTAGLHF NLL +L + G+ FVTLHVGAGTF PV+VE+ +DH+
Sbjct: 171 YQTVYSKVPGAVAAPTAGLHFDENLLEKLKAKGVNFEFVTLHVGAGTFQPVRVENIEDHV 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT------TEDGIINPWSGFT 293
MH+E + A+ + K G R+++VGTTS+R +E+A +I P+ T
Sbjct: 231 MHAEYVEVSQEVCNAIIATKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSDT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + T Y+HA+ YRF+SYGD
Sbjct: 291 SIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKHAVQEKYRFFSYGDA 350
Query: 354 SLLFQ 358
+ +
Sbjct: 351 MFINK 355
>gi|116490643|ref|YP_810187.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Oenococcus oeni PSU-1]
gi|290890058|ref|ZP_06553141.1| hypothetical protein AWRIB429_0531 [Oenococcus oeni AWRIB429]
gi|116091368|gb|ABJ56522.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Oenococcus
oeni PSU-1]
gi|290480249|gb|EFD88890.1| hypothetical protein AWRIB429_0531 [Oenococcus oeni AWRIB429]
Length = 359
Score = 455 bits (1170), Expect = e-126, Method: Composition-based stats.
Identities = 138/363 (38%), Positives = 207/363 (57%), Gaps = 19/363 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FD++LP IA P+ RD++RL++++ D D+ +LN DA+V
Sbjct: 10 TLSDFDYNLPHELIAQTPLKQRDASRLLLLNAKTGA---YEDKHFYDIIDYLNPGDALVM 66
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NN++VI A+L G R + + L + + W +P+K G ++ F +++
Sbjct: 67 NNSRVIPARLRGWR----PETKGHVEVLLLRQDHGDVWETLIKPAKKFPVGSVIDFGNEN 122
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
++ + V+ + G + F GI + +G +PLPPYI K +D YQ
Sbjct: 123 -ETIMTGKVVGELEHGGRYVEFQYDGI-FMELLDKLGEMPLPPYIKEK----LKDQERYQ 176
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T Y+KI+GS AAPTAGLH+T LL ++ + GIK +TLHVG GTF PV+ E+ D H MH
Sbjct: 177 TVYSKIEGSAAAPTAGLHWTPELLDKVRAKGIKTIELTLHVGLGTFRPVEEENIDKHKMH 236
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE------DGIINPWSGFTNI 295
SE + A +N V++ GGRIV+ GTT++R LET + G + SG+T+I
Sbjct: 237 SEFYQLSQAAADQINQVRNNGGRIVATGTTTIRTLETIGHKFNRDKYGGNVQADSGWTDI 296
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PG+R+ VD ++NFHLPKSTL+MLV+AF G E Y+HAI YRF+S+GD
Sbjct: 297 FIKPGFRWTTVDAFITNFHLPKSTLVMLVAAFTGRENILNAYKHAIQEKYRFFSFGDAMF 356
Query: 356 LFQ 358
+ +
Sbjct: 357 IHK 359
>gi|16272205|ref|NP_438415.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae Rd KW20]
gi|260580871|ref|ZP_05848696.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae RdAW]
gi|1172814|sp|P44595|QUEA_HAEIN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|1573210|gb|AAC21912.1| queuosine biosynthesis protein (queA) [Haemophilus influenzae Rd
KW20]
gi|260092494|gb|EEW76432.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae RdAW]
Length = 363
Score = 455 bits (1170), Expect = e-126, Method: Composition-based stats.
Identities = 139/365 (38%), Positives = 203/365 (55%), Gaps = 17/365 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R S RL+ ++ I SD+ ++ D ++
Sbjct: 1 MRVSDFNFDLPDELIARYPKTDRVSCRLLQLNGENG---EIFHRTFSDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKIEVLVERMLDEHRFLAHIRSSKSPKEGAELFLGED 112
Query: 121 D-GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G++ V+ + + S L + +G +PLPPYI RP + D
Sbjct: 113 KLGENNGIKAVMKARHGALFEVELSDKSTALLDVLQTIGHMPLPPYI--DRPDEEADQEC 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y+K+ G+VAAPTAGLHF NLL +L + G+ FVTLHVGAGTF PV+VE+ +DH+
Sbjct: 171 YQTVYSKVPGAVAAPTAGLHFDENLLEKLKAKGVNFEFVTLHVGAGTFQPVRVENIEDHV 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT------TEDGIINPWSGFT 293
MH+E + A+ + K G R+++VGTTS+R +E+A +I P+ T
Sbjct: 231 MHAEYVEVSQEVCNAIIATKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSDT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + T Y+HA+ YRF+SYGD
Sbjct: 291 SIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKHAVKEKYRFFSYGDA 350
Query: 354 SLLFQ 358
+ +
Sbjct: 351 MFINK 355
>gi|293567788|ref|ZP_06679129.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium E1071]
gi|291589373|gb|EFF21180.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium E1071]
Length = 343
Score = 455 bits (1170), Expect = e-126, Method: Composition-based stats.
Identities = 150/357 (42%), Positives = 207/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++FDFDLP IA P+ RD +RL+V+ + D ++ L DA+V
Sbjct: 2 LTTEDFDFDLPEELIAQTPLKDRDHSRLLVLDRKTG---EMEDKHFHEIIEELQPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L ++W +P+K K G + F
Sbjct: 59 MNNTRVLPARLYGEK----PDTGAHLEVLLLTNTQGDTWETLIKPAKRAKVGTRISF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A V ++ G ++ F GI LE + +G +PLPPYI + D Y
Sbjct: 112 -GDGRLQAVVKEELEHGGRIIDFEYEGIFLE-ILESLGEMPLPPYIKER----LEDPDRY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + + G+++ ++TLHVG GTF PV V+ ++H M
Sbjct: 166 QTVYAKENGSAAAPTAGLHFTKELLDEIEAKGVELVYLTLHVGLGTFRPVSVDKIEEHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A+ LN V+ GG+IV+VGTTS+R LET T+ +G I SG+T+IFITP
Sbjct: 226 HSEFYRLTEEAAERLNQVRKNGGKIVAVGTTSIRTLETIGTKFNGEIRADSGWTDIFITP 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+ V+ +NFHLPKSTL+MLVSAF G E T YQHAI YRF+S+GD +
Sbjct: 286 GYEFKVVEAFSTNFHLPKSTLVMLVSAFAGRELTLSAYQHAIEERYRFFSFGDAMFV 342
>gi|282875935|ref|ZP_06284802.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus epidermidis SK135]
gi|281294960|gb|EFA87487.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus epidermidis SK135]
Length = 341
Score = 454 bits (1169), Expect = e-126, Method: Composition-based stats.
Identities = 143/357 (40%), Positives = 208/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++FD+ LP S IA P+ RD +RL+V+ + ++ D+ + D +V
Sbjct: 1 MNIEDFDYHLPESLIAQTPLKNRDQSRLLVLSKDTG---ELTHLHFRDVIYYFEPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + ++ N W V +P+K IKKG L+F
Sbjct: 58 LNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKKGHRLNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++ A I++ G ++ GI L+ ++ +G +PLPPYI + D Y
Sbjct: 111 -GDGKIVAECIEELEQGGRIMRLHYEGI-LQERLDELGEMPLPPYIKERLD----DPDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ G+ + F+TLHVG GTF PV VE+ DDH M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTDDLLNKIKQKGVHIAFITLHVGLGTFRPVSVENIDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN K G R++SVGTTS R LET + SG+T+IFI PG
Sbjct: 225 HSEYYQMTQETADLLNKTKESGKRVISVGTTSTRTLETIRRDHPQFVATSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD L+
Sbjct: 285 FEFKAIDGLITNFHLPKSTLVMLVSAFSNKKYILNAYHKAVEMEYRFFSFGDAMLII 341
>gi|220935237|ref|YP_002514136.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Thioalkalivibrio sp. HL-EbGR7]
gi|254764288|sp|B8GTQ5|QUEA_THISH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|219996547|gb|ACL73149.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Thioalkalivibrio sp. HL-EbGR7]
Length = 364
Score = 454 bits (1169), Expect = e-126, Method: Composition-based stats.
Identities = 143/360 (39%), Positives = 215/360 (59%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F ++LPP IA RP+ R ++RL+ + + ++D DLP LN D +V
Sbjct: 1 MRLSDFHYELPPELIAQRPLAERSASRLLCLDRDTGA---LADRRFRDLPDLLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L GV+ + + + + + R SK +G +L
Sbjct: 58 FNDTRVIPARLLGVK----RDTGGRVEVLVERVLDEHRVLAHVRASKSPGEGVVLWL--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ LEA V + G++ ++ + + + G +PLPPYI +RP A D Y
Sbjct: 111 --EEALEAVVEGR--EGDLFCLWFAGDLPVIELLERHGHMPLPPYI--ERPDAAEDRDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A G+VAAPTAGLHF +++++R+ + G++ VTLHVGAGTF PV+VED H+M
Sbjct: 165 QTVFASRPGAVAAPTAGLHFDADIMARMRARGVETAAVTLHVGAGTFQPVRVEDVSRHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + + + ++RGGR+V+VGTT++R LE+A DG + P+SG T +FITPG
Sbjct: 225 HAEWTEVSTQVCDQVAACRARGGRVVAVGTTAVRSLESAAA-DGELKPFSGDTRLFITPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
Y FR VD L++NFHLP+STLLMLVSAF G E + Y+HA++ YRF+SYGD + +
Sbjct: 284 YTFRVVDALVTNFHLPESTLLMLVSAFAGYEPVMQAYRHAVAERYRFFSYGDAMFIGPQE 343
>gi|94501955|ref|ZP_01308463.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
[Oceanobacter sp. RED65]
gi|94425897|gb|EAT10897.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
[Oceanobacter sp. RED65]
Length = 353
Score = 454 bits (1169), Expect = e-126, Method: Composition-based stats.
Identities = 139/356 (39%), Positives = 198/356 (55%), Gaps = 15/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F F+LP IA P R S+RL+ V+ I + D+ A + D +V
Sbjct: 1 MKTSDFHFELPQELIAQYPPKERTSSRLLCVNSESGRAD-IQHKVFKDILAEVQPGDLMV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + ++ V+ + S+ K G +
Sbjct: 60 FNNTRVIPARLFGEKES-----GGKLEVLIERMTGTDTALVHMKSSRSPKPGSTITL--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L+ +V + + L +L + VG +PLPPY+ +R + D Y
Sbjct: 112 ---EGLKVSVEGRQDALFELKFHLAPDQDLVHWLEQVGHMPLPPYM--EREDEDSDRERY 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL+ L G+ + FVTLHVGAGTF PVKV+D ++H M
Sbjct: 167 QTVYNEKPGAVAAPTAGLHFDDALLNALKDKGVGIAFVTLHVGAGTFQPVKVDDVNEHKM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + T +A+ K+ G ++++VGTTS+R LETA ++ G I P+ G T IFI PG
Sbjct: 227 HSEYLEVSEETCEAIRKTKALGKKVIAVGTTSVRSLETA-SQSGEIQPYQGDTEIFIYPG 285
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STL+MLVSAF G Y A+ YRF+SYGD LL
Sbjct: 286 YQFKTVDRLLTNFHLPESTLIMLVSAFVGRGPILNAYDEAVREQYRFFSYGDAMLL 341
>gi|145635151|ref|ZP_01790856.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae PittAA]
gi|145640168|ref|ZP_01795752.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae R3021]
gi|145267572|gb|EDK07571.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae PittAA]
gi|145274754|gb|EDK14616.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae 22.4-21]
Length = 363
Score = 454 bits (1169), Expect = e-126, Method: Composition-based stats.
Identities = 139/365 (38%), Positives = 205/365 (56%), Gaps = 17/365 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R S RL+ ++ I SD+ ++ D ++
Sbjct: 1 MRVSDFNFDLPDELIARYPKTDRVSCRLLQLNGENG---EIFHRTFSDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKIEVLVERMLDEHRFLAHIRSSKSPKEGAELFLGED 112
Query: 121 D-GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G++ V+ ++ + S L + ++G +PLPPYI RP + D
Sbjct: 113 KLGENNGIKAVMKARHSSLFEVELSDKSTALLDVLQIIGHMPLPPYI--DRPDEEADKEC 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y+K+ G+VAAPTAGLHF NLL +L + G+ FVTLHVGAGTF PV+VE+ +DH+
Sbjct: 171 YQTVYSKVPGAVAAPTAGLHFDENLLEKLKAKGVNFEFVTLHVGAGTFQPVRVENIEDHV 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT------TEDGIINPWSGFT 293
MH+E + A+ + K G R+++VGTTS+R +E+A +I P+ T
Sbjct: 231 MHAEYVEVSQEVCNAIIATKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSDT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + T Y+HA+ YRF+SYGD
Sbjct: 291 SIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKHAVQEKYRFFSYGDA 350
Query: 354 SLLFQ 358
+ +
Sbjct: 351 MFINK 355
>gi|145632489|ref|ZP_01788223.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae 3655]
gi|144986684|gb|EDJ93236.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae 3655]
Length = 363
Score = 454 bits (1169), Expect = e-126, Method: Composition-based stats.
Identities = 139/365 (38%), Positives = 204/365 (55%), Gaps = 17/365 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R S RL+ ++ I SD+ ++ D ++
Sbjct: 1 MRVSDFNFDLPDELIARYPKTDRVSCRLLQLNGENG---EIFHRTFSDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKIEVLVERMLDEHRFLAHIRSSKSPKEGAELFLGED 112
Query: 121 D-GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G++ V+ ++ + S L + +G +PLPPYI RP + D
Sbjct: 113 KLGENNGIKAVMKARHSSLFEVELSDKSTALLDVLQTIGHMPLPPYI--DRPDEEADQEC 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y+K+ G+VAAPTAGLHF NLL +L + G+ FVTLHVGAGTF PV+VE+ +DH+
Sbjct: 171 YQTVYSKVPGAVAAPTAGLHFDENLLEKLKAKGVNFEFVTLHVGAGTFQPVRVENIEDHV 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT------TEDGIINPWSGFT 293
MH+E + A+ + K G R+++VGTTS+R +E+A +I P+ T
Sbjct: 231 MHAEYVEVSQEVCNAIIATKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSDT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + T Y+HA+ YRF+SYGD
Sbjct: 291 SIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKHAVQEKYRFFSYGDA 350
Query: 354 SLLFQ 358
+ +
Sbjct: 351 MFINK 355
>gi|315224422|ref|ZP_07866252.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Capnocytophaga ochracea F0287]
gi|314945625|gb|EFS97644.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Capnocytophaga ochracea F0287]
Length = 349
Score = 454 bits (1169), Expect = e-126, Method: Composition-based stats.
Identities = 144/361 (39%), Positives = 200/361 (55%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F+F+LP +A P RD ARLMV+H I L D+ + + D V
Sbjct: 1 MKLSNFNFELPKELLAEYPSENRDEARLMVIHRKTG---EIEHRLFKDVIDYFDDGDVFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + + +I L +S W V P++ I+ G+ L+F
Sbjct: 58 LNNTKVFPARLYGNK----EKTKAKIEVFLLRELSAEQRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
+ L A VID + L F G E + ++ +G PLP YI RP++ D
Sbjct: 114 K---NAELVAEVIDNTTSRGRTLRFLYDGTYEEFRQHLTELGQTPLPKYI--SRPVEPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ +L+ RL GI VTLHVG GTF PV+VED
Sbjct: 169 EERYQTIYAKYEGAVAAPTAGLHFSKHLMKRLEIKGITFAEVTLHVGLGTFNPVEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I + +N K R+ +VGTT +R+LE++ + DG +NP+ G+TN F
Sbjct: 229 KHKMDSEEIHIPESQTKIINVAKVNKKRVCAVGTTVMRVLESSVSSDGFLNPFDGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH PKSTLLM+VSAF G + + Y+ A+ Y+FYSYGD L+
Sbjct: 289 IFPPYDFSIANAMITNFHTPKSTLLMMVSAFAGHDLIMRAYKEAVEQKYKFYSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 L 349
>gi|301065826|ref|YP_003787849.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Lactobacillus casei str. Zhang]
gi|300438233|gb|ADK17999.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Lactobacillus casei str. Zhang]
Length = 357
Score = 454 bits (1169), Expect = e-126, Method: Composition-based stats.
Identities = 140/357 (39%), Positives = 203/357 (56%), Gaps = 17/357 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FD+DLP IA P+ RD++RL+V++ + D D+ + DA+V
Sbjct: 17 QLSDFDYDLPHELIAQTPLKERDASRLLVLNSETG---EMQDKHFYDILDYFKPGDALVM 73
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L GV+ + L S + W +P++ G ++ F
Sbjct: 74 NDTRVMPARLYGVK----PETGAHMEVLLLNNTSGDDWETLMKPARKAPVGTVIDF---- 125
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G L+ATV + G ++ F GI + +G PLPPYI K D YQ
Sbjct: 126 GDGLLKATVTKELEHGGRMIHFDYDGI-FMEILDKLGETPLPPYIKEK----LEDPEMYQ 180
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T Y+K GS AAPTAGLH+T +LL ++ G+K+ ++TLHVG GTF PV E+ + H MH
Sbjct: 181 TVYSKELGSAAAPTAGLHWTKDLLKKVQEKGVKLVYLTLHVGLGTFRPVVEENIEAHKMH 240
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPG 300
SE + A LN V+ GGRI++ GTTS+R LE T+ DG I SG+T+IFI PG
Sbjct: 241 SEFYRLTPEAAATLNDVRDNGGRIIATGTTSIRTLEAIGTKFDGAIKADSGWTDIFIKPG 300
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+++ VD ++NFHLPKSTL+MLV+AF G + Y+HAI YRF+S+GD ++
Sbjct: 301 YQWKVVDAFITNFHLPKSTLVMLVAAFTGRDTILNAYKHAIDEKYRFFSFGDAMFIY 357
>gi|312884249|ref|ZP_07743958.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
caribbenthicus ATCC BAA-2122]
gi|309368022|gb|EFP95565.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
caribbenthicus ATCC BAA-2122]
Length = 351
Score = 454 bits (1169), Expect = e-126, Method: Composition-based stats.
Identities = 139/363 (38%), Positives = 203/363 (55%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N + D D+ A + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPQPERTASRLLQLDGNSGD---LKDGTFVDVLAQVQPGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + S + R SK K G +
Sbjct: 58 FNNTRVIPARMFGRKES-----GGKLEVLVERVLDEKSILAHVRCSKSPKPGSTIFVGEH 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D A ++ + + + + S + + +G +PLPPYI RP + D Y
Sbjct: 113 D---EFSAQMVARHDA--LFELKFNSDQNVLSVLEQIGHMPLPPYI--DRPDEDSDKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF +L +L G+++ +VTLHVGAGTF PVKV++ DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDELMLEKLAQKGVELAYVTLHVGAGTFQPVKVDNIHDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDG----IINPWSGFTNIF 296
H+E + A A+ + K+RGGRI++VGTTS+R LE+A + P+ G T IF
Sbjct: 226 HAEYVEVPASVIDAIKATKARGGRIIAVGTTSVRSLESAAQHALTNGTELAPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY ++ VD L++NFHLP+STL+MLVSAF G E T Y HA+ + YRF+SYGD+ +
Sbjct: 286 IYPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYENTMNAYHHAVKNNYRFFSYGDSMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 KKK 348
>gi|82751238|ref|YP_416979.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus RF122]
gi|82656769|emb|CAI81198.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus RF122]
Length = 354
Score = 454 bits (1169), Expect = e-126, Method: Composition-based stats.
Identities = 146/356 (41%), Positives = 208/356 (58%), Gaps = 16/356 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++EFD+DLP S IA P+ RD +RL+V+ + D+ + D +V
Sbjct: 15 NIEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETG---EMKHLHFKDIIEYFRPGDTLVL 71
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 72 NDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF---- 123
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI + D YQ
Sbjct: 124 GNGKIIAECIKEMDQGGRIMRLHYEGI-LQERLDELGEMPLPPYIKERLD----DPDRYQ 178
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YAK GS AAPTAGLHFT LL+ + + G+ + FVTLHVG GTF PV V+D +DH MH
Sbjct: 179 TVYAKESGSAAAPTAGLHFTDELLTEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHEMH 238
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
SE + TA LN KS+G RI+SVGTTS R LET + SG+TNIFI PG+
Sbjct: 239 SEYYQMTQETADLLNDTKSKGHRIISVGTTSTRTLETIRRDHDKFVETSGWTNIFIYPGF 298
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 299 DFKAIDGQITNFHLPKSTLVMLVSAFSTRENVLNAYKTAVNLEYRFFSFGDAMLII 354
>gi|291165804|gb|EFE27852.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Filifactor
alocis ATCC 35896]
Length = 340
Score = 454 bits (1169), Expect = e-126, Method: Composition-based stats.
Identities = 150/358 (41%), Positives = 206/358 (57%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M K+F +DLP + IA P+ RDS++L+++ I D+ +L D +V
Sbjct: 1 MNTKDFYYDLPEACIAQEPLKQRDSSKLLLLDKKTG---EIEHKHFKDITQYLKKGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + I L R+ +W V A+P+K +K G+I+ F
Sbjct: 58 MNNTRVLPARLFGTK----EDTGANIELLLLKRMDLTTWEVMAKPAKRLKIGNIIFF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A V + + G ++ F GI E + ++GT+PLPPYI +K D Y
Sbjct: 111 --HQTLSAVVKEIKDEGIRIIEFIYDGI-FEEILDMLGTMPLPPYIHKK----LEDKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K+ GS AAPTAGLHFT LLS L IG+++ +VTLHVG GTF PV VED H M
Sbjct: 164 QTVYSKVDGSAAAPTAGLHFTKKLLSELQDIGVQLEYVTLHVGLGTFRPVMVEDVTKHHM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E I AQ +N K+ RI+ VGTTS+R LE++ DG I+ SG+T+IFI P
Sbjct: 224 HTEYYEIQKDVAQRINQAKAEKRRIICVGTTSVRTLESSAR-DGRISELSGWTDIFIYPP 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRF+ D L++NFHLP+STLLMLVSA E Y+ AI YRF+S+GD +
Sbjct: 283 YRFQMADALITNFHLPESTLLMLVSALANKEFIMHAYKTAIEQNYRFFSFGDAMFIHN 340
>gi|326335244|ref|ZP_08201439.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Capnocytophaga sp. oral taxon 338 str. F0234]
gi|325692515|gb|EGD34459.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Capnocytophaga sp. oral taxon 338 str. F0234]
Length = 349
Score = 454 bits (1169), Expect = e-126, Method: Composition-based stats.
Identities = 140/361 (38%), Positives = 192/361 (53%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F+F+LP +A P RD ARLMVVH I L D+ + + D V
Sbjct: 1 MKLSSFNFNLPKELLAEYPSENRDEARLMVVHRKT---EKIEHRLFKDVIDYFDDGDVFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + +I L ++ W V P++ I+ G+ L F
Sbjct: 58 LNNTKVFPARLYGHK----EKTNAKIEVFLLRELNKEQRLWDVLVDPARKIRIGNKLFF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D + L A VID + L F G ++ +G PLP YI RP++ D
Sbjct: 113 --DPEEELVAEVIDNTTSRGRTLRFLFDGSYEGFRNKLLELGHTPLPKYI--SRPVEPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ L+ RL GI +TLH+G GTF PV+VED
Sbjct: 169 EERYQTIYAKYEGAVAAPTAGLHFSKQLMKRLEIKGINFAELTLHIGLGTFNPVEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I +N K G R+ +VGTT +R +E++ + +NP+ G+TN F
Sbjct: 229 KHKMDSEEIIIPQEACDIVNKAKEAGKRVCAVGTTVMRAMESSVSSHNTLNPFIGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH PKSTLLM+VSAF G E Y+ A+ Y+F+SYGD L+
Sbjct: 289 IFPPYDFGVANAMITNFHTPKSTLLMMVSAFAGHELIMNAYEEAVKEKYKFFSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|229918408|ref|YP_002887054.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Exiguobacterium sp. AT1b]
gi|229469837|gb|ACQ71609.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Exiguobacterium sp. AT1b]
Length = 352
Score = 454 bits (1169), Expect = e-126, Method: Composition-based stats.
Identities = 137/360 (38%), Positives = 202/360 (56%), Gaps = 16/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ V ++DF+LP IA P+ R S+RL+V+ I D+ +LN DA+V
Sbjct: 6 LNVNDYDFELPEELIAQVPLLDRTSSRLLVLDRETGD---IEHRHFRDVLDYLNEGDALV 62
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+++V+ A+L G + ++ L + + W +P+K ++ G I+ F
Sbjct: 63 VNDSRVLPARLFGAK----QETGGKVELLLLKQTEDDVWEALVKPAKKVRVGSIVEF--- 115
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L A +++ G F GI + +GT+PLPPYI + D Y
Sbjct: 116 -GDGLLRAECVEELPEGGRRFKFDYDGI-FYEILDELGTMPLPPYIREQLD----DQDRY 169
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +GS AAPTAGLHFT LL + G+++ +TLHVG GTF PV + ++H M
Sbjct: 170 QTVYARERGSAAAPTAGLHFTEELLEAAKAKGVRLIPLTLHVGLGTFRPVTADSIEEHTM 229
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +A AL +++ GGRI +VGTTS R LET + G SG+T+IFI PG
Sbjct: 230 HSEYFELSAESAAALREIRANGGRIFAVGTTSTRTLETIMRDHGDFVESSGWTDIFIYPG 289
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
+A+D L++NFHLPKSTL+MLVSAF + Y+ A++ YRF+S+GD L+ +K
Sbjct: 290 VELKAIDGLITNFHLPKSTLVMLVSAFATRDIILHAYRTAVAERYRFFSFGDAMLITRKE 349
>gi|256819029|ref|YP_003140308.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Capnocytophaga ochracea DSM 7271]
gi|256580612|gb|ACU91747.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Capnocytophaga ochracea DSM 7271]
Length = 349
Score = 454 bits (1169), Expect = e-126, Method: Composition-based stats.
Identities = 144/361 (39%), Positives = 201/361 (55%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F+F+LP +A P RD ARLMV+H I L D+ + + D V
Sbjct: 1 MKLSNFNFELPKELLAEYPSENRDEARLMVIHRKTG---EIEHRLFKDVIDYFDDGDVFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + + +I L +S W V P++ I+ G+ L+F
Sbjct: 58 LNNTKVFPARLYGNK----EKTKAKIEVFLLRELSAEQRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
+ L A VID + L F G E + ++ +G PLP YI RP++ D
Sbjct: 114 K---NAELVAEVIDNTTSRGRTLRFLYDGTYEEFRQHLTELGQTPLPKYI--SRPVEPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ +L+ RL GI VTLHVG GTF PV+VED
Sbjct: 169 EERYQTIYAKYEGAVAAPTAGLHFSKHLMKRLEIKGITFSEVTLHVGLGTFNPVEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I + +N+ K R+ +VGTT +R+LE++ + DG +NP+ G+TN F
Sbjct: 229 KHKMDSEEIHIPESQTKIINAAKVNKKRVCAVGTTVMRVLESSVSSDGFLNPFDGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH PKSTLLM+VSAF G + + Y+ A+ Y+FYSYGD L+
Sbjct: 289 IFPPYDFSIANAMITNFHTPKSTLLMMVSAFAGHDLIMRAYKEAVEQKYKFYSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 L 349
>gi|119468103|ref|ZP_01611229.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein ) [Alteromonadales bacterium TW-7]
gi|119448096|gb|EAW29360.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein ) [Alteromonadales bacterium TW-7]
Length = 343
Score = 454 bits (1169), Expect = e-126, Method: Composition-based stats.
Identities = 141/360 (39%), Positives = 207/360 (57%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R S+RL+ + IS + SD+ +N ND ++
Sbjct: 1 MRVADFSFDLPDELIARFPKKDRTSSRLLSLDGPTG---EISHKVFSDILELVNENDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + + + R SK +K G+ +
Sbjct: 58 FNNTRVIPARMFGQKAS-----GGKVEVLVERVLDEHRVLAHVRASKSLKPGNEVIL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + +AT+I + +T + + + ++ +G +PLPPYI RP D D Y
Sbjct: 110 --EGKAKATMIARHDT--LFELEFDHSKNVLDTLNDIGHMPLPPYI--DRPDDEADRERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF L++ L + G+ + FVTLHVGAGTF PV+VE D+H+M
Sbjct: 164 QTVYGEKPGAVAAPTAGLHFDEPLMAALKNKGVNMAFVTLHVGAGTFQPVRVETIDEHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-EDGIINPWSGFTNIFITP 299
HSE + A+ K+ GGR+++VGTTS+R LE+A G ++ + G T+IFI P
Sbjct: 224 HSEYIEVPQDVVDAVAQTKANGGRVIAVGTTSMRSLESAAKIHGGKLDTYFGDTDIFIFP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY+F VD +++NFHLP+STL+MLVSAF G + Y AI YRF+SYGD L +K
Sbjct: 284 GYQFNVVDAMVTNFHLPESTLIMLVSAFSGQDNIMGAYNTAIEQKYRFFSYGDAMFLTRK 343
>gi|116494314|ref|YP_806048.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Lactobacillus casei ATCC 334]
gi|239629700|ref|ZP_04672731.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus paracasei subsp. paracasei 8700:2]
gi|116104464|gb|ABJ69606.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Lactobacillus casei ATCC 334]
gi|239528386|gb|EEQ67387.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus paracasei subsp. paracasei 8700:2]
Length = 356
Score = 454 bits (1168), Expect = e-125, Method: Composition-based stats.
Identities = 140/357 (39%), Positives = 203/357 (56%), Gaps = 17/357 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FD+DLP IA P+ RD++RL+V++ + D D+ + DA+V
Sbjct: 16 QLSDFDYDLPHELIAQTPLKERDASRLLVLNSETG---EMQDKHFYDILDYFKPGDALVM 72
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L GV+ + L S + W +P++ G ++ F
Sbjct: 73 NDTRVMPARLYGVK----PETGAHMEVLLLNNTSGDDWETLMKPARKAPVGTVIDF---- 124
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G L+ATV + G ++ F GI + +G PLPPYI K D YQ
Sbjct: 125 GDGLLKATVTKELEHGGRMIHFDYDGI-FMEILDKLGETPLPPYIKEK----LEDPEMYQ 179
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T Y+K GS AAPTAGLH+T +LL ++ G+K+ ++TLHVG GTF PV E+ + H MH
Sbjct: 180 TVYSKELGSAAAPTAGLHWTKDLLKKVQEKGVKLVYLTLHVGLGTFRPVVEENIEAHKMH 239
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPG 300
SE + A LN V+ GGRI++ GTTS+R LE T+ DG I SG+T+IFI PG
Sbjct: 240 SEFYRLTPEAAATLNDVRDNGGRIIATGTTSIRTLEAIGTKFDGAIKADSGWTDIFIKPG 299
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+++ VD ++NFHLPKSTL+MLV+AF G + Y+HAI YRF+S+GD ++
Sbjct: 300 YQWKVVDAFITNFHLPKSTLVMLVAAFTGRDTILNAYKHAIDEKYRFFSFGDAMFIY 356
>gi|157961295|ref|YP_001501329.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
pealeana ATCC 700345]
gi|189038880|sp|A8H2K7|QUEA_SHEPA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|157846295|gb|ABV86794.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Shewanella
pealeana ATCC 700345]
Length = 345
Score = 454 bits (1168), Expect = e-125, Method: Composition-based stats.
Identities = 136/360 (37%), Positives = 204/360 (56%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V ++ F+LP IA P R ++RL+ + N ++D +D+ +N D +V
Sbjct: 1 MRVADYSFELPDELIARYPTAERTASRLLSLDGNSG---QLADLQFTDILEQVNPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + + ++ + + + R SK K I+
Sbjct: 58 FNNTRVIPARMFGTK-----QSGGKLEILVERMLDDKRVLAHVRCSKSPKVDSIVCL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
E ++ + + + + S + + VG +PLPPYI RP + D Y
Sbjct: 110 --DGGYEMVMLARHDA--LFELSLQSDKTILEVLEEVGHMPLPPYI--DRPDEDADKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF +L+ L + G+ FVTLHVGAGTF PV+V++ DH M
Sbjct: 164 QTVYNQNPGAVAAPTAGLHFDDAILAALKAKGVNTAFVTLHVGAGTFQPVRVDNILDHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFITP 299
HSE + + K+RG R+++VGTTS+R LE+A G++ +SG T+IFI P
Sbjct: 224 HSEWAEVPQTVVDLIGETKARGNRVIAVGTTSVRSLESAAKASQGVLQSFSGDTDIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY+F+ VD +++NFHLP+STL+ML+SAF G +E K YQHAI+ YRF+SYGD + +K
Sbjct: 284 GYQFQVVDAMVTNFHLPESTLIMLLSAFAGFDEVKNAYQHAIAQKYRFFSYGDAMFVTKK 343
>gi|326794831|ref|YP_004312651.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Marinomonas
mediterranea MMB-1]
gi|326545595|gb|ADZ90815.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Marinomonas
mediterranea MMB-1]
Length = 353
Score = 454 bits (1168), Expect = e-125, Method: Composition-based stats.
Identities = 139/358 (38%), Positives = 202/358 (56%), Gaps = 16/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V ++ F+LP IA P+ R S+RL+ +H + + SD+ + + D +V
Sbjct: 1 MKVSDYHFNLPDELIARYPMPERSSSRLLQLHGQTG---ELKHGVFSDVLSLVEPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + +S + R SK K G+ L+ +
Sbjct: 58 FNNTRVIPARVFGQKAS-----GGKVEVLVERLLSSTEILAHVRASKSPKPGNELYLGTD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+S +A ++++ L LE + VG +PLPPYI +RP + D Y
Sbjct: 113 RNES-FKAVMVERDAN---LFRLQFENPVLE-VLEKVGHMPLPPYI--ERPDEDSDQERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL +L G+ FVTLHVGAGTF PVKV+D DHIM
Sbjct: 166 QTVYNEKPGAVAAPTAGLHFDDELLEKLAEKGVDTAFVTLHVGAGTFQPVKVDDVKDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + K+ G R+++VGTTS+R LE+A ++ G I P + T+IFI PG
Sbjct: 226 HSEYAEVSQEVVDKVRQAKANGKRVIAVGTTSVRSLESA-SQSGQIEPMADDTSIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y F+ VD L++NFHLP+STL+ML+SAF G Y+ A+ YRF+SYGD + +
Sbjct: 285 YEFKTVDALVTNFHLPESTLIMLISAFAGYSNVMAAYKAAVDEKYRFFSYGDAMFITR 342
>gi|253732296|ref|ZP_04866461.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|253733109|ref|ZP_04867274.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus TCH130]
gi|282908959|ref|ZP_06316777.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus WW2703/97]
gi|282911276|ref|ZP_06319078.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus WBG10049]
gi|297590817|ref|ZP_06949455.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus MN8]
gi|253724085|gb|EES92814.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|253728865|gb|EES97594.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus TCH130]
gi|282324971|gb|EFB55281.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus WBG10049]
gi|282327223|gb|EFB57518.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus WW2703/97]
gi|297575703|gb|EFH94419.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus MN8]
gi|312437893|gb|ADQ76964.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus TCH60]
Length = 347
Score = 454 bits (1168), Expect = e-125, Method: Composition-based stats.
Identities = 146/356 (41%), Positives = 208/356 (58%), Gaps = 16/356 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++EFD+DLP S IA P+ RD +RL+V+ + D+ + D +V
Sbjct: 8 NIEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETG---EMKHLHFKDIIEYFRPGDTLVL 64
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 65 NDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF---- 116
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI + D YQ
Sbjct: 117 GNGKIIAECIKEMDQGGRIMRLHYEGI-LQERLDELGEMPLPPYIKERLD----DPDRYQ 171
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YAK GS AAPTAGLHFT LL+ + + G+ + FVTLHVG GTF PV V+D +DH MH
Sbjct: 172 TVYAKESGSAAAPTAGLHFTDELLTEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHEMH 231
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
SE + TA LN KS+G RI+SVGTTS R LET + SG+TNIFI PG+
Sbjct: 232 SEYYQMTQETADLLNDTKSKGHRIISVGTTSTRTLETIRRDHDKFVETSGWTNIFIYPGF 291
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 292 DFKAIDGQITNFHLPKSTLVMLVSAFSTRENVLNAYKTAVNLEYRFFSFGDAMLII 347
>gi|209885349|ref|YP_002289206.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Oligotropha
carboxidovorans OM5]
gi|226713845|sp|B6JFC2|QUEA_OLICO RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|209873545|gb|ACI93341.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Oligotropha
carboxidovorans OM5]
Length = 361
Score = 454 bits (1168), Expect = e-125, Method: Composition-based stats.
Identities = 190/361 (52%), Positives = 246/361 (68%), Gaps = 9/361 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M FDFDLPP IALRP PRDSARL++V PN+ + DH V DLP L D IV
Sbjct: 1 MRTDLFDFDLPPECIALRPAEPRDSARLLLVRPNVG----VEDHSVRDLPGLLAPGDQIV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI AQL+G R E I TL R+ + W RP++ + +GD+L F ++
Sbjct: 57 VNDTKVIAAQLSGRRIGGT--SEPHIDVTLIKRIDGSRWQALVRPARKLSEGDVLRFGNE 114
Query: 121 D---GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+A+V K GE+ L F+ G L++ I+ +G PLPPYIA +R D +D
Sbjct: 115 GRVCLLGNLDASVEAKGEAGEVTLAFAFHGPVLDQAIADLGAPPLPPYIASRRAPDDKDV 174
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT +AK +G+VAAPTAGLHFT L + L + GI + +TLHVGAGTF+PVK +DTDD
Sbjct: 175 GDYQTMFAKNEGAVAAPTAGLHFTPALEAALAARGIGIQRLTLHVGAGTFLPVKADDTDD 234
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MHSE G + TA+ LN +++GGR+V+VG+TS+RLLE+A TEDGII P++G T IFI
Sbjct: 235 HKMHSEWGTVSEETAKTLNEARAKGGRVVAVGSTSMRLLESAATEDGIIQPFTGETAIFI 294
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGY+FRAVD++M+NFHLP+STL MLVSAF G++ + Y HAI+ YRFYSYGD LLF
Sbjct: 295 TPGYKFRAVDVMMTNFHLPRSTLFMLVSAFSGLDTMRAAYAHAIAKGYRFYSYGDACLLF 354
Query: 358 Q 358
+
Sbjct: 355 R 355
>gi|330830093|ref|YP_004393045.1| S-adenosylmethionine [Aeromonas veronii B565]
gi|328805229|gb|AEB50428.1| S-adenosylmethionine [Aeromonas veronii B565]
Length = 350
Score = 454 bits (1168), Expect = e-125, Method: Composition-based stats.
Identities = 132/364 (36%), Positives = 202/364 (55%), Gaps = 21/364 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R ++RL+ + + D+ LN D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPMAERTASRLLQLDGQTGA---LRHGQFVDVLDQLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + +S + R SK K G
Sbjct: 58 FNNTRVIPARMFGQKAS-----GGKLEILVERILDEHSVLAHVRASKAPKPGTR-----M 107
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+EA + + + + + + + + +G +PLPPYI RP + D Y
Sbjct: 108 IMDGGVEAEMRARHDA--LFEIHFLDPRPVLEILEAIGHMPLPPYI--DRPDEDADKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G++ FVTLHVGAGTF PV+V+ +DH M
Sbjct: 164 QTVYNQKPGAVAAPTAGLHFDEPLLEKIRAKGVETAFVTLHVGAGTFQPVRVDKIEDHHM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT----TEDGIINPWSGFTNIF 296
HSE + A+ + ++RGGR+++VGTTS+R LE+A + + P+ T+IF
Sbjct: 224 HSEYAEVPQEVVDAIAATRARGGRVIAVGTTSVRSLESAAKVTLAQGKPLAPFFSDTDIF 283
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+F+ VD +++NFHLP+STL+MLVSAF G + YQ A++ YRF+SYGD +
Sbjct: 284 IFPGYQFQIVDAMVTNFHLPESTLIMLVSAFAGYDNVMAAYQAAVAGQYRFFSYGDAMFV 343
Query: 357 FQKR 360
+++
Sbjct: 344 TRRQ 347
>gi|150396485|ref|YP_001326952.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sinorhizobium medicae WSM419]
gi|166218742|sp|A6U8Y7|QUEA_SINMW RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|150028000|gb|ABR60117.1| Queuosine biosynthesis protein [Sinorhizobium medicae WSM419]
Length = 360
Score = 454 bits (1168), Expect = e-125, Method: Composition-based stats.
Identities = 211/362 (58%), Positives = 256/362 (70%), Gaps = 6/362 (1%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP +ALRP PRDSAR++VV P V+ D V DLP+FL DA+V
Sbjct: 1 MRVDLFDFDLPEDSVALRPASPRDSARMLVVRP--GGEPVLEDRGVLDLPSFLRQGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL GVR+ +S TLHMRV+P+ W +ARP++ +K GD + F
Sbjct: 59 FNDTKVIPAQLEGVRYRG-EHISTPVSLTLHMRVAPDRWKAFARPARRLKPGDRVSFGHG 117
Query: 121 DGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+A V +K + GE+ L F +SG L+ I VG IPLPPYIA KR DARD
Sbjct: 118 GNACLLGSLDAMVEEKGDAGEVTLRFDLSGPSLDEAIMSVGHIPLPPYIASKRADDARDR 177
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YA+ +G+VAAPTAGLHFT L + L GI+ +FVTLHVGAGTF+PVK +DTDD
Sbjct: 178 TDYQTVYAREEGAVAAPTAGLHFTDRLFAMLDEAGIERHFVTLHVGAGTFLPVKADDTDD 237
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H+MH EIG +DA TA LN+V+ RGGR+V VGTTSLRL+E+A EDG I+ WSG T IFI
Sbjct: 238 HVMHEEIGHVDAVTAAKLNAVRERGGRVVCVGTTSLRLVESAAAEDGTIHAWSGATGIFI 297
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFRA +LM+NFHLPKSTL MLVSAF G+E + Y HAI+ YRFYSYGD+SLLF
Sbjct: 298 TPGYRFRAAHMLMTNFHLPKSTLFMLVSAFAGLETMRDAYAHAIATGYRFYSYGDSSLLF 357
Query: 358 QK 359
+K
Sbjct: 358 RK 359
>gi|315127835|ref|YP_004069838.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pseudoalteromonas sp. SM9913]
gi|315016349|gb|ADT69687.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pseudoalteromonas sp. SM9913]
Length = 343
Score = 454 bits (1168), Expect = e-125, Method: Composition-based stats.
Identities = 143/361 (39%), Positives = 207/361 (57%), Gaps = 20/361 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R S+RL+ ++ I + SD+ +N ND +V
Sbjct: 1 MRVADFSFDLPDELIARFPKADRTSSRLLSLNGPTG---EIEHKIFSDILELVNENDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A++ G + ++ + + + + R SK K G++L
Sbjct: 58 FNNTKVIPARMFGQKES-----GGKVEVLVERVLDEHRVLAHIRASKSPKPGNVLIL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSIS-GIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ + +A ++ + +T L + ++ VG +PLPPYI RP + D
Sbjct: 110 --EGKAKAIMVARHDT---LFELEFDRSENVLDILNDVGHMPLPPYI--DRPDNEADRER 162
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y + G+VAAPTAGLHF L++ L G+++ FVTLHVGAGTF PV+VE D+HI
Sbjct: 163 YQTVYGEKPGAVAAPTAGLHFDDKLMAALKDKGVQMAFVTLHVGAGTFQPVRVESVDEHI 222
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-EDGIINPWSGFTNIFIT 298
MHSE + A+ S K++GGR++++GTTS+R LE+A G ++ + G T+IFI
Sbjct: 223 MHSEYIEVPQDVVDAVASTKAKGGRVIAIGTTSVRSLESAAKIHGGKLDTYFGDTDIFIF 282
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY+F VD +++NFHLP+STL+MLVSAF G + Y AI YRF+SYGD L +
Sbjct: 283 PGYQFNVVDAMVTNFHLPESTLIMLVSAFAGQDNIMGAYNTAIEQQYRFFSYGDAMFLTR 342
Query: 359 K 359
K
Sbjct: 343 K 343
>gi|170723507|ref|YP_001751195.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
putida W619]
gi|229619924|sp|B1JDS3|QUEA_PSEPW RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|169761510|gb|ACA74826.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Pseudomonas putida W619]
Length = 349
Score = 454 bits (1168), Expect = e-125, Method: Composition-based stats.
Identities = 144/358 (40%), Positives = 204/358 (56%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R +RL+V+ ++ +DL +L D +V
Sbjct: 1 MRVADFSFELPDSLIARHPLAERHGSRLLVLDGPSGA---LAHKQFTDLLDYLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K+G ++
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEVLVERVLDSHRVLAHVRASKAPKEGAVILI--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
EA ++ + +T L E+ + VG +PLPPYI RP D D Y
Sbjct: 110 --DGGGEAEMVARHDTLFELRFTE----EVLPLLERVGHMPLPPYI--DRPDDGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL ++ + G++ FVTLHVGAGTF PV+V+ +DH M
Sbjct: 162 QTVYAERAGAVAAPTAGLHFDQALLDKIAAKGVERAFVTLHVGAGTFQPVRVDKIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A+ + ++RGGR+V+VGTTS+R LE+A DG++ +SG T+IFI PG
Sbjct: 222 HKEWLEVSQDVVDAIEACRARGGRVVAVGTTSVRSLESAAR-DGVLKAFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y A+ YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAVEQGYRFFSYGDAMFITR 338
>gi|13470903|ref|NP_102472.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Mesorhizobium loti MAFF303099]
gi|21263904|sp|Q98M55|QUEA_RHILO RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|14021646|dbj|BAB48258.1| S-adenosylmethionine tRNA ribosyltransferase [Mesorhizobium loti
MAFF303099]
Length = 361
Score = 454 bits (1168), Expect = e-125, Method: Composition-based stats.
Identities = 200/363 (55%), Positives = 251/363 (69%), Gaps = 9/363 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP RIALRP PRDSA+++VV + D V DLP+ L + D +V
Sbjct: 1 MRVDLFDFELPEERIALRPAEPRDSAKMLVV----KSGEALDDRKVGDLPSLLRAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R + ++ TLHMRV+P+ W + RP K I GD +HF
Sbjct: 57 FNDTKVIPAQLKGIRRRG--EAQAQVEATLHMRVAPDRWLAFMRPGKRIAAGDRIHFGHD 114
Query: 121 DGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+L+ATVI+K GE LL F +SG L+ + VG IPLPPYIA KR D RD
Sbjct: 115 GNSCFLGQLDATVIEKGEGGEALLGFDLSGPFLDEALHAVGHIPLPPYIASKRDDDERDR 174
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YA+ +G+VAAPTAGLHFT L + L + G++ +FVTLHVGAGTF+PVK +DT D
Sbjct: 175 ADYQTIYAREEGAVAAPTAGLHFTPELFAALDAKGVERHFVTLHVGAGTFLPVKADDTAD 234
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+EIG + TA ALN+ K+RGGRI++VGTTSLRLLE+A EDG + WSG T+IFI
Sbjct: 235 HKMHAEIGSVSRETADALNAAKARGGRIIAVGTTSLRLLESAAREDGTVPAWSGPTDIFI 294
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFR D+LM+NFHLP+STL MLVSAF G++ Y HAI++ YRFYSYGD SLL+
Sbjct: 295 TPGYRFRTADMLMTNFHLPRSTLFMLVSAFSGLDTMGAAYAHAIANRYRFYSYGDASLLY 354
Query: 358 QKR 360
+
Sbjct: 355 RAE 357
>gi|146340922|ref|YP_001205970.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bradyrhizobium sp. ORS278]
gi|166216703|sp|A4YV19|QUEA_BRASO RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|146193728|emb|CAL77745.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bradyrhizobium sp. ORS278]
Length = 364
Score = 454 bits (1168), Expect = e-125, Method: Composition-based stats.
Identities = 189/362 (52%), Positives = 237/362 (65%), Gaps = 9/362 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M FDF LPP IALRP PR++AR++VV + V+ D + DLP +L D +V
Sbjct: 1 MRTDLFDFHLPPENIALRPASPREAARMLVVQGD----GVLRDRTIGDLPDWLEPGDQLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI AQL+G R E +I TL R+ + W RP+K + GD + F ++
Sbjct: 57 VNDTKVIAAQLSGRRISR--ETEAKIEATLIKRLDGSRWQALVRPAKKLLAGDTIRFGNE 114
Query: 121 DGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+ATV K GE+ L F G L++ I+ +G PLPPYIA KRP D +D
Sbjct: 115 GKVCLLGHLDATVEAKGEEGEVTLSFVFHGPALDQAIADLGRPPLPPYIAGKRPADEQDA 174
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT +A +G+VAAPTAGLHFT L RL + G+ + VTLHVGAGTF+PVKVEDT+
Sbjct: 175 QDYQTMFAAKEGAVAAPTAGLHFTPALEQRLRARGVGLQRVTLHVGAGTFLPVKVEDTEG 234
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+E G + TA ALN K+ GGRIV+VGTTS+RLLE+A DG I P+ T+IFI
Sbjct: 235 HRMHAEWGSLTPETAAALNQAKAEGGRIVAVGTTSMRLLESAALPDGTIAPFEAETSIFI 294
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFRAVDILM+NFHLP+STL MLVSAF G+E + Y HAI YRFYSYGD LLF
Sbjct: 295 TPGYRFRAVDILMTNFHLPRSTLFMLVSAFAGLETMQAAYAHAIESGYRFYSYGDACLLF 354
Query: 358 QK 359
++
Sbjct: 355 RQ 356
>gi|217979658|ref|YP_002363805.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Methylocella silvestris BL2]
gi|254764284|sp|B8EIV1|QUEA_METSB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|217505034|gb|ACK52443.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylocella silvestris BL2]
Length = 361
Score = 454 bits (1168), Expect = e-125, Method: Composition-based stats.
Identities = 182/358 (50%), Positives = 241/358 (67%), Gaps = 4/358 (1%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDFDLP + IALRP PRD+ARL+VV P P + D + DLP L + D +V
Sbjct: 1 MRVDQFDFDLPDASIALRPAHPRDAARLLVVRPGRLSPAALDDRFIRDLPELLAAGDVLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L+G R I TLH R + W + RP+K ++ G+ + F S
Sbjct: 61 VNDTRVIPARLDGFRARG--EALARIEATLHKREGGDLWRAFLRPAKKLRAGETILFSS- 117
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++L A V++K GE+LL F +SG EL+ + VG +PLPPYI+ KR D D DY
Sbjct: 118 -GDAKLAARVVEKGEDGEVLLGFELSGAELDLALERVGRMPLPPYISSKRGADESDAADY 176
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A G+VAAPTA LHFT LL+ L++ G+++ VTLHVGAGTF+PVK EDTDDH M
Sbjct: 177 QTLFADRPGAVAAPTASLHFTPALLAALVAKGVQIERVTLHVGAGTFLPVKAEDTDDHRM 236
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G + A TA ALN+ + G R+V+ GTTSLR+LE+A DG + +SG T+IFITPG
Sbjct: 237 HAEWGEVSAETAGALNAARRAGRRVVAAGTTSLRILESAAGPDGAVAAFSGDTSIFITPG 296
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y F+AVD+L++NFHLP+STL MLV AF G++ + Y HAI+ YRFYSYGD LL+
Sbjct: 297 YSFKAVDLLLTNFHLPRSTLFMLVCAFSGLQTMRDAYNHAIAAGYRFYSYGDACLLYP 354
>gi|304380763|ref|ZP_07363431.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus ATCC BAA-39]
gi|304340700|gb|EFM06632.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus ATCC BAA-39]
gi|320140473|gb|EFW32327.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus MRSA131]
gi|320144012|gb|EFW35781.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus MRSA177]
Length = 347
Score = 453 bits (1167), Expect = e-125, Method: Composition-based stats.
Identities = 146/356 (41%), Positives = 207/356 (58%), Gaps = 16/356 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++EFD+DLP S IA P+ RD +RL+V+ + D+ + D +V
Sbjct: 8 NIEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETG---EMKHLHFKDIIEYFRPGDTLVL 64
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 65 NDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF---- 116
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI + D YQ
Sbjct: 117 GNGKIIAECIKEMDQGGRIMRLHYEGI-LQERLDELGEMPLPPYIKERLD----DPDRYQ 171
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YAK GS AAPTAGLHFT LL + + G+ + FVTLHVG GTF PV V+D +DH MH
Sbjct: 172 TVYAKESGSAAAPTAGLHFTDELLIEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHEMH 231
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
SE + TA LN KS+G RI+SVGTTS R LET + SG+TNIFI PG+
Sbjct: 232 SEYYQMTQETADLLNDTKSKGHRIISVGTTSTRTLETIRRDHDKFVETSGWTNIFIYPGF 291
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 292 DFKAIDGQITNFHLPKSTLVMLVSAFSSRENVLNAYKTAVNLEYRFFSFGDAMLII 347
>gi|302383465|ref|YP_003819288.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Brevundimonas subvibrioides ATCC 15264]
gi|302194093|gb|ADL01665.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Brevundimonas subvibrioides ATCC 15264]
Length = 356
Score = 453 bits (1167), Expect = e-125, Method: Composition-based stats.
Identities = 200/367 (54%), Positives = 247/367 (67%), Gaps = 19/367 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP RIALRP PRDSARL+VV ++DH++ DLPAFL DA+V
Sbjct: 1 MKTADFDFDLPEDRIALRPAEPRDSARLLVVQDG-----ALADHVIRDLPAFLRPGDALV 55
Query: 61 FNNTKVITAQLNGVRFC--------HINRREKEISCTLHMRVSPNSWSVYARPSKVIKKG 112
FN+T+VI A+L+GVR + TLH R +P++WS + +P K I+
Sbjct: 56 FNDTRVIPARLSGVRQRPNPVVGSPEGETLTVPVEATLHHRDTPDTWSAFMKPGKRIRPD 115
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
D + F L ATVI K + G + L F +SG L+ I VG +PLPPYIA KRP
Sbjct: 116 DRIVF------DSLSATVIAKSDDGLVTLRFDVSGPALDDAIRAVGVMPLPPYIAAKRPE 169
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D RD +DYQT +A GSVAAPTAGLHFT LL + + G+ + VTLHVGAGTF+PVK
Sbjct: 170 DDRDRLDYQTVFATHDGSVAAPTAGLHFTPALLDAIRAKGVTTHAVTLHVGAGTFLPVKA 229
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+DT DH MHSE G + TA ALN+V + GGRIV VGTTSLRLLE+ATT DG+I P+ G
Sbjct: 230 DDTADHRMHSEWGTVSGETAAALNAVHANGGRIVCVGTTSLRLLESATTPDGVIQPFHGD 289
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T IFITPGY FRA D+L++NFHLPKSTL MLVSAF G++ K Y HA++ YRFYSYGD
Sbjct: 290 TAIFITPGYAFRAADVLVTNFHLPKSTLFMLVSAFAGLDTMKTAYAHAVADGYRFYSYGD 349
Query: 353 TSLLFQK 359
SLLF++
Sbjct: 350 GSLLFRQ 356
>gi|261381310|ref|ZP_05985883.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
subflava NJ9703]
gi|284795799|gb|EFC51146.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
subflava NJ9703]
Length = 342
Score = 453 bits (1167), Expect = e-125, Method: Composition-based stats.
Identities = 153/356 (42%), Positives = 210/356 (58%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF+LP IA P R S+RL+V P L I D DLP ++ D +V
Sbjct: 1 MDISDFDFELPEKLIAQHPPEVRGSSRLLVALP----TLPIEDKHFGDLPDYVAPGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + +I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKAS-----GGKIEALIERVLDAHTALAHIRSSKSPKPGTELIF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++++ E+ + + + G +PLPPYI +R D D Y
Sbjct: 109 --EGDIRAVMMERAE--ELFCLKFEGEQTVYELLEQNGHLPLPPYI--ERVADDEDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL + G++ VTLHVGAGTF PV+V+ ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTDELLGRLKAKGVETAEVTLHVGAGTFQPVRVDKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A T A+ + K+RG ++ +VGTTS+R LE+A E G + G T+IFITPG
Sbjct: 223 HSEWFDVPAETVAAIEAAKARGNKVWAVGTTSMRALESAARETGRLKAGRGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF D L++NFHLPKSTLLMLVSAF G+E + +Y+HA+ YRF+SYGD +L
Sbjct: 283 YRFNVADRLITNFHLPKSTLLMLVSAFSGMEHIRSVYRHAVEQEYRFFSYGDAMIL 338
>gi|148255729|ref|YP_001240314.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bradyrhizobium sp. BTAi1]
gi|166216702|sp|A5EJR4|QUEA_BRASB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|146407902|gb|ABQ36408.1| S-adenosylmethionine [Bradyrhizobium sp. BTAi1]
Length = 364
Score = 453 bits (1167), Expect = e-125, Method: Composition-based stats.
Identities = 190/362 (52%), Positives = 240/362 (66%), Gaps = 9/362 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M FDF LPP IALRP PR++AR++VV + V+ D +V+DLP +L D +V
Sbjct: 1 MRTDLFDFHLPPENIALRPASPREAARMLVVQGD----GVLRDRIVADLPDWLEPGDQLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI AQL+G R E +I TL R+ + W RP+K + GD + F +
Sbjct: 57 VNDTKVIAAQLSGRRVSR--ETEAKIEATLIKRLDGSRWQALVRPAKKLAPGDTIRFGHE 114
Query: 121 DGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+ATV K GE+ L F G L++ I+ +G PLPPYIA KRP D +D
Sbjct: 115 GKVCLLGHLDATVEAKGEEGEVTLSFVFHGPALDQAIADLGRPPLPPYIAGKRPADEQDA 174
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT +A +G+VAAPTAGLHFT L RL + G+ + VTLHVGAGTF+PVKVEDT+
Sbjct: 175 ADYQTMFAAKEGAVAAPTAGLHFTPALEQRLRARGVGLQRVTLHVGAGTFLPVKVEDTEG 234
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+E G + A TA ALN +++GGRIV+VGTTS+RLLE+A DG I P+ T+IFI
Sbjct: 235 HRMHAEWGSLSAETAAALNEARAKGGRIVAVGTTSMRLLESAALPDGTIAPFEAETSIFI 294
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFRAVDILM+NFHLP+STL MLVSAF G+E + Y HAI YRFYSYGD LLF
Sbjct: 295 TPGYRFRAVDILMTNFHLPRSTLFMLVSAFAGLETMQAAYAHAIRSGYRFYSYGDACLLF 354
Query: 358 QK 359
++
Sbjct: 355 RQ 356
>gi|116512383|ref|YP_809599.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Lactococcus
lactis subsp. cremoris SK11]
gi|116108037|gb|ABJ73177.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Lactococcus lactis subsp. cremoris SK11]
Length = 348
Score = 453 bits (1167), Expect = e-125, Method: Composition-based stats.
Identities = 146/359 (40%), Positives = 208/359 (57%), Gaps = 17/359 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDFDLP IA P+ R +RL+++ P + D ++ L + DA+V
Sbjct: 4 NINDFDFDLPEELIAQTPLEKRSESRLLILDPKT---EELEDRHFYNIIDELEAGDALVL 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNT+V+ A+L+G R I L + N W A+P++ +K G+ + F
Sbjct: 61 NNTRVLPARLHGERA----ETGGHIELLLLKDMGENRWETLAKPARKMKVGEEVVF---- 112
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G RL+A V++ G ++ F GI LE + +G +PLPPYI + D YQ
Sbjct: 113 GDGRLKAVVVEILEHGGRIVEFKYDGIFLE-ILESLGEMPLPPYIHEQ----LEDQERYQ 167
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +AK GS AAPTAGLH+T LL ++ G+K+ +TLHVG GTF PV V++ D+H MH
Sbjct: 168 TVFAKENGSAAAPTAGLHYTPELLEKIADKGVKIVELTLHVGLGTFRPVSVDNVDEHHMH 227
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPG 300
SE + A L +VK+ G +I + GTTS+R LET ++ DG I SG+T+IFI PG
Sbjct: 228 SEFYRLTEEAAAQLRAVKASGHKIFASGTTSIRTLETIGSKFDGDIQADSGWTDIFIKPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
Y ++ VD +NFHLPKSTL+MLV+AF G + + YQHAI YRF+S+GD + K
Sbjct: 288 YEWKVVDAFNTNFHLPKSTLVMLVAAFAGRDFVLEAYQHAIDEKYRFFSFGDAMFVRPK 346
>gi|298694919|gb|ADI98141.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus ED133]
Length = 354
Score = 453 bits (1167), Expect = e-125, Method: Composition-based stats.
Identities = 146/356 (41%), Positives = 208/356 (58%), Gaps = 16/356 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++EFD+DLP S IA P+ RD +RL+V+ + D+ + D +V
Sbjct: 15 NIEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETG---EMKHLHFKDIIEYFRPGDTLVL 71
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 72 NDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF---- 123
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI + D YQ
Sbjct: 124 GNGKIIAECIKEMDQGGRIMRLHYEGI-LQERLDELGEMPLPPYIKERLD----DPDRYQ 178
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YAK GS AAPTAGLHFT LL+ + + G+ + FVTLHVG GTF PV V+D +DH MH
Sbjct: 179 TVYAKESGSAAAPTAGLHFTDELLTEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHEMH 238
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
SE + TA LN KS+G RI+SVGTTS R LET + SG+TNIFI PG+
Sbjct: 239 SEYYQMAQETADLLNDTKSKGHRIISVGTTSTRTLETIRRDHDKFVETSGWTNIFIYPGF 298
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 299 DFKAIDGQITNFHLPKSTLVMLVSAFSTRENVLNAYKTAVNLEYRFFSFGDAMLII 354
>gi|297207639|ref|ZP_06924074.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus ATCC 51811]
gi|296887656|gb|EFH26554.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus ATCC 51811]
Length = 347
Score = 453 bits (1167), Expect = e-125, Method: Composition-based stats.
Identities = 146/356 (41%), Positives = 208/356 (58%), Gaps = 16/356 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++EFD+DLP S IA P+ RD +RL+V+ + D+ + D +V
Sbjct: 8 NIEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETG---EMKHLHFKDIIEYFRPGDTLVL 64
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 65 NDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF---- 116
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI + D YQ
Sbjct: 117 GNGKIIAECIKEMDQGGRIMRLHYEGI-LQERLDELGEMPLPPYIKERLD----DPDRYQ 171
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YAK GS AAPTAGLHFT LL+ + + G+ + FVTLHVG GTF PV V+D +DH MH
Sbjct: 172 TVYAKESGSAAAPTAGLHFTDELLTEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHEMH 231
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
SE + TA LN KS+G RI+SVGTTS R LET + SG+TNIFI PG+
Sbjct: 232 SEYYQMTQETADLLNDTKSKGHRIISVGTTSTRTLETIRRDHDKFVEMSGWTNIFIYPGF 291
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 292 DFKAIDGQITNFHLPKSTLVMLVSAFSTRENVLNAYKTAVNLEYRFFSFGDAMLII 347
>gi|227534466|ref|ZP_03964515.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Lactobacillus paracasei subsp. paracasei ATCC 25302]
gi|227187865|gb|EEI67932.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Lactobacillus paracasei subsp. paracasei ATCC 25302]
Length = 361
Score = 453 bits (1167), Expect = e-125, Method: Composition-based stats.
Identities = 139/357 (38%), Positives = 202/357 (56%), Gaps = 17/357 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FD+DLP IA P+ RD++RL+V++ + D D+ + DA+V
Sbjct: 21 QLSDFDYDLPHELIAQTPLKERDASRLLVLNSETG---EMQDKHFYDILDYFKPGDALVM 77
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L GV+ + L S + W +P++ G ++ F
Sbjct: 78 NDTRVMPARLYGVK----PETGAHMEVLLLNNTSGDDWETLMKPARKAPVGTVIDF---- 129
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G L+A V + G ++ F GI + +G PLPPYI K D YQ
Sbjct: 130 GDGLLKARVTKELEHGGRMIHFDYDGI-FMEILDKLGETPLPPYIKEK----LEDPEMYQ 184
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T Y+K GS AAPTAGLH+T +LL ++ G+K+ ++TLHVG GTF PV E+ + H MH
Sbjct: 185 TVYSKELGSAAAPTAGLHWTKDLLKKVQEKGVKLVYLTLHVGLGTFRPVVEENIEAHKMH 244
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPG 300
SE + A LN V+ GGRI++ GTTS+R LE T+ DG I SG+T+IFI PG
Sbjct: 245 SEFYRLTPEAAATLNDVRDNGGRIIATGTTSIRTLEAIGTKFDGAIKADSGWTDIFIKPG 304
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+++ VD ++NFHLPKSTL+MLV+AF G + Y+HAI YRF+S+GD ++
Sbjct: 305 YQWKVVDAFITNFHLPKSTLVMLVAAFTGRDTILNAYKHAIDEKYRFFSFGDAMFIY 361
>gi|27468241|ref|NP_764878.1| S-adenosylmethionine tRNA ribosyltransferase [Staphylococcus
epidermidis ATCC 12228]
gi|293366403|ref|ZP_06613082.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus epidermidis M23864:W2(grey)]
gi|27315787|gb|AAO04922.1|AE016748_156 S-adenosylmethionine tRNA ribosyltransferase [Staphylococcus
epidermidis ATCC 12228]
gi|291319528|gb|EFE59895.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus epidermidis M23864:W2(grey)]
Length = 354
Score = 453 bits (1167), Expect = e-125, Method: Composition-based stats.
Identities = 142/357 (39%), Positives = 208/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +++FD+ LP S IA P+ RD +RL+V+ + ++ D+ + D +V
Sbjct: 14 LNIEDFDYHLPESLIAQTPLKNRDQSRLLVLSKDTG---ELTHLHFRDVIHYFEPGDTLV 70
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + ++ N W V +P+K IKKG L+F
Sbjct: 71 LNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKKGHRLNF--- 123
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++ A I++ G ++ GI L+ ++ +G +PLPPYI + D Y
Sbjct: 124 -GDGKIVAECIEELEQGGRIMRLHYEGI-LQERLDELGEMPLPPYIKERLD----DPDRY 177
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ G+ + F+TLHVG GTF PV VE+ DDH M
Sbjct: 178 QTVYAKESGSAAAPTAGLHFTDDLLNKIKQKGVHIAFITLHVGLGTFRPVSVENIDDHEM 237
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN K G R++SVGTTS R LET + SG+T+IFI PG
Sbjct: 238 HSEYYQMTQETADLLNKTKESGKRVISVGTTSTRTLETIRRDHPQFVATSGWTDIFIYPG 297
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD L+
Sbjct: 298 FEFKAIDGLITNFHLPKSTLVMLVSAFSNKKYILNAYHKAVEMEYRFFSFGDAMLII 354
>gi|229523437|ref|ZP_04412844.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae TM 11079-80]
gi|229339800|gb|EEO04815.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
cholerae TM 11079-80]
Length = 352
Score = 453 bits (1167), Expect = e-125, Method: Composition-based stats.
Identities = 135/363 (37%), Positives = 205/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N + D D+ + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPKAERTASRLLQLDGNSG---QLVDGTFKDVLELVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + ++ + R SK K G L+
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D A + + + + + + + ++ +G +PLPPYI RP + D Y
Sbjct: 113 D---EFHAVMQARHDA--LFEIRFTAETVVLDILNQIGHMPLPPYI--DRPDEEADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G+++ +VTLHVGAGTF PV+VE+ DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDQVLLEQIQAKGVELAYVTLHVGAGTFQPVRVENIHDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT----TEDGIINPWSGFTNIF 296
H+E + A+ + K+RGGR+V+VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAVAATKARGGRVVAVGTTSVRSLESAAQDALQKGTELKPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ YRF+SYGD +
Sbjct: 286 IFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYEHTMAAYEHAVKEQYRFFSYGDAMFI 345
Query: 357 FQK 359
++
Sbjct: 346 RKQ 348
>gi|227825068|ref|ZP_03989900.1| S-adenosylmethionine-tRNA-ribosyltransferase-isomerase
[Acidaminococcus sp. D21]
gi|226905567|gb|EEH91485.1| S-adenosylmethionine-tRNA-ribosyltransferase-isomerase
[Acidaminococcus sp. D21]
Length = 339
Score = 453 bits (1166), Expect = e-125, Method: Composition-based stats.
Identities = 139/356 (39%), Positives = 199/356 (55%), Gaps = 19/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD+DLP IA P+ PRD++RL+V+ + +LP +L D +V
Sbjct: 1 MEVTDFDYDLPKELIAQTPIEPRDASRLLVMDKKTGA---LEHRHFYNLPEYLRPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+V+ A+L+G + + L R + W V +P K +++G + F +
Sbjct: 58 FNDTRVMPARLHGTKT-----TGAHVEVFLLTRKNNTDWEVLVKPGKKLQEGAEIIFSDE 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L T+++K + G + F G+ E + +G PLPPYI K +D Y
Sbjct: 113 -----LSCTILEKTDFGGRIARFRFDGV-FEEILDRLGETPLPPYIHEK----LKDKERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + GS AAPTAGLHFT L+ ++ +G++ FVTL+VG GTF PV E +DH M
Sbjct: 163 QTVYNRELGSAAAPTAGLHFTKELMQKIKEMGVEEVFVTLNVGLGTFRPVSEERIEDHEM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A ALN K G RI++VGTTS+R LE+A G + P +T IFI PG
Sbjct: 223 HSEFYTVSPEAAAALNRAKKEGRRIIAVGTTSVRTLESAGAS-GTMVPGGNWTKIFIYPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
++F VD L++NFHLP+STL+MLVSA E Y A+ YRF+S+GD +
Sbjct: 282 FKFHFVDALVTNFHLPQSTLIMLVSALSSRENILHAYGEAVKEKYRFFSFGDAMFI 337
>gi|300023678|ref|YP_003756289.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Hyphomicrobium denitrificans ATCC 51888]
gi|299525499|gb|ADJ23968.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Hyphomicrobium denitrificans ATCC 51888]
Length = 370
Score = 453 bits (1166), Expect = e-125, Method: Composition-based stats.
Identities = 199/365 (54%), Positives = 241/365 (66%), Gaps = 9/365 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSC----PLVISDHLVSDLPAFLNSN 56
M FDF+LP S IALRP PRDSARL+VVHP +SD V DLP LN
Sbjct: 1 MRTDLFDFELPDSAIALRPAEPRDSARLLVVHPVKGGCARDDAELSDKTVRDLPGLLNPG 60
Query: 57 DAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
DA+VFN+T+VI A L+GVR + ++ L +V +SW +ARP+K ++ GD +H
Sbjct: 61 DALVFNDTRVIPAALSGVRTRG--DVQAKVDFNLTKQVGDSSWRAFARPAKRLEVGDRVH 118
Query: 117 FFSQDGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
F L+ATV K GE+ L F SG L+ I VG +PLPPYIA KR D
Sbjct: 119 FGHSGESCFLGALDATVSAKGEAGEVELAFDYSGSILDDAIRAVGVMPLPPYIALKRGAD 178
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
RD YQT YAK G+VAAPTAGLHFT L + L + GI +FVTLHVG GTF+PVK +
Sbjct: 179 DRDRQSYQTVYAKNDGAVAAPTAGLHFTPELFAALDARGISRHFVTLHVGPGTFLPVKAD 238
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
DT +H MHSE G I A TA ALN ++RGGRIV+VGTTSLR+LE+A +DG I WSG T
Sbjct: 239 DTSEHKMHSEWGEISAETAAALNETRARGGRIVAVGTTSLRVLESAAGDDGSIPAWSGDT 298
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFITPGYRF+A+D LM+NFHLP+STL MLV+AF G+ + Y HAI YRFYSYGD
Sbjct: 299 SIFITPGYRFKAIDALMTNFHLPRSTLFMLVAAFSGLGTMRAAYGHAIHSGYRFYSYGDA 358
Query: 354 SLLFQ 358
SLLF
Sbjct: 359 SLLFP 363
>gi|238759998|ref|ZP_04621150.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
aldovae ATCC 35236]
gi|238701751|gb|EEP94316.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
aldovae ATCC 35236]
Length = 375
Score = 453 bits (1166), Expect = e-125, Method: Composition-based stats.
Identities = 141/360 (39%), Positives = 210/360 (58%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ + +DL L D +V
Sbjct: 20 MRVADFSFELPESLIAHYPQPQRSGCRLLSLDGPTGT---LTHGIFTDLLDKLLPGDLLV 76
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + + SK K G L
Sbjct: 77 FNNTRVIPARLFGRKAS-----GGKLEVLVERVLDDHRVLAHVKASKAPKPGAELLLGDD 131
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++AT++ + +T + + ++ ++ VG +PLPPYI RP + D Y
Sbjct: 132 E---SIQATMLARHDT--LFELRFDDERDVFTILNAVGHMPLPPYI--DRPDEDADRELY 184
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF +L+ L GI++ FVTLHVGAGTF PV+V+ ++HIM
Sbjct: 185 QTVYSQRPGAVAAPTAGLHFDEPMLAALREKGIEMAFVTLHVGAGTFQPVRVDTIEEHIM 244
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+V+VGTTS+R LE+A T++G+I P+ G T IFI
Sbjct: 245 HSEYAEVPQDVVDAVLACKARGNRVVAVGTTSVRSLESAAKATDNGLIAPFFGDTKIFIY 304
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ VD L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD + +
Sbjct: 305 PGYHYQVVDALITNFHLPESTLIMLVSAFAGYKNTMNAYQQAVAEQYRFFSYGDAMFISR 364
>gi|238795574|ref|ZP_04639089.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
mollaretii ATCC 43969]
gi|238720693|gb|EEQ12494.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
mollaretii ATCC 43969]
Length = 367
Score = 453 bits (1166), Expect = e-125, Method: Composition-based stats.
Identities = 141/360 (39%), Positives = 207/360 (57%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ + +DL L D +V
Sbjct: 6 MRVADFSFELPESLIAHYPQAQRSGCRLLSLDGPTGA---LTHGIFTDLLDKLEPGDLLV 62
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + + SK K G L
Sbjct: 63 FNNTRVIPARLFGRKAS-----GGKLEVLVERVLDDHRVLAHVKASKSPKPGTELLLGDD 117
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT++ + T + + ++ ++ VG +PLPPYI RP + D Y
Sbjct: 118 E---SIRATMLARHET--LFELRFDDERDVFTILNAVGHMPLPPYI--DRPDEDADRELY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF +L+ L GI++ FVTLHVGAGTF PV+V+ ++H+M
Sbjct: 171 QTVYSERLGAVAAPTAGLHFDEPMLAALREKGIEMAFVTLHVGAGTFQPVRVDTIEEHVM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+V+VGTTS+R LE+A TE G+I P+ G T IFI
Sbjct: 231 HSEYAEVPQEVVDAVLACKARGKRVVAVGTTSVRSLESAANATEKGLIAPFFGDTCIFIY 290
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ VD L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD + +
Sbjct: 291 PGYEYQVVDALVTNFHLPESTLIMLVSAFAGYKNTMNAYQQAVAEQYRFFSYGDAMFITR 350
>gi|257793713|ref|ZP_05642692.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A9781]
gi|258410988|ref|ZP_05681268.1| S-adenosylmethioninetRNA ribosyltransferase-isomerase
[Staphylococcus aureus A9763]
gi|258420211|ref|ZP_05683166.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A9719]
gi|300911722|ref|ZP_07129165.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus TCH70]
gi|257787685|gb|EEV26025.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A9781]
gi|257840138|gb|EEV64602.1| S-adenosylmethioninetRNA ribosyltransferase-isomerase
[Staphylococcus aureus A9763]
gi|257843922|gb|EEV68316.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A9719]
gi|300885968|gb|EFK81170.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus TCH70]
Length = 347
Score = 453 bits (1166), Expect = e-125, Method: Composition-based stats.
Identities = 146/356 (41%), Positives = 208/356 (58%), Gaps = 16/356 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++EFD+DLP S IA P+ RD +RL+V+ + D+ + D +V
Sbjct: 8 NIEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETG---EMKHLHFKDIIEYFRPGDTLVL 64
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 65 NDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF---- 116
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI + D YQ
Sbjct: 117 GNGKIIAECIKEMDQGGRIMRLHYEGI-LQERLDELGEMPLPPYIKERLD----DPDRYQ 171
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YAK GS AAPTAGLHFT LL+ + + G+ + FVTLHVG GTF PV V+D +DH MH
Sbjct: 172 TVYAKESGSAAAPTAGLHFTDELLTEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHEMH 231
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
SE + TA LN KS+G RI+SVGTTS R LET + SG+TNIFI PG+
Sbjct: 232 SEYYQMTQETADLLNDTKSKGHRIISVGTTSTRTLETIRRDHDKFVETSGWTNIFIYPGF 291
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 292 DFKAIDGQITNFHLPKSTLVMLVSAFSTRENVLNAYKTAVNLEYRFFSFGDAMLII 347
>gi|327381705|gb|AEA53181.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus casei LC2W]
gi|327384871|gb|AEA56345.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus casei BD-II]
Length = 357
Score = 453 bits (1166), Expect = e-125, Method: Composition-based stats.
Identities = 139/357 (38%), Positives = 202/357 (56%), Gaps = 17/357 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FD+DLP IA P+ RD++RL+V++ + D D+ + DA+V
Sbjct: 17 QLSDFDYDLPHELIAQTPLKERDASRLLVLNSETG---EMQDKRFYDILDYFKPGDALVM 73
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L GV+ + L S + W +P++ G ++ F
Sbjct: 74 NDTRVMPARLYGVK----PETGAHMEVLLLNNTSGDDWETLMKPARKAPVGTVIDF---- 125
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G L+A V + G ++ F GI + +G PLPPYI K D YQ
Sbjct: 126 GDGLLKARVTKELEHGGRMIHFDYDGI-FMEILDKLGETPLPPYIKEK----LEDPEMYQ 180
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T Y+K GS AAPTAGLH+T +LL ++ G+K+ ++TLHVG GTF PV E+ + H MH
Sbjct: 181 TVYSKELGSAAAPTAGLHWTKDLLKKVQEKGVKLVYLTLHVGLGTFRPVVEENIEAHKMH 240
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPG 300
SE + A LN V+ GGRI++ GTTS+R LE T+ DG I SG+T+IFI PG
Sbjct: 241 SEFYRLTPEAAATLNDVRDNGGRIIATGTTSIRTLEAIGTKFDGAIKADSGWTDIFIKPG 300
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+++ VD ++NFHLPKSTL+MLV+AF G + Y+HAI YRF+S+GD ++
Sbjct: 301 YQWKVVDAFITNFHLPKSTLVMLVAAFTGRDTILNAYKHAIDEKYRFFSFGDAMFIY 357
>gi|258626957|ref|ZP_05721759.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase [Vibrio
mimicus VM603]
gi|258580781|gb|EEW05728.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase [Vibrio
mimicus VM603]
Length = 352
Score = 453 bits (1166), Expect = e-125, Method: Composition-based stats.
Identities = 135/363 (37%), Positives = 205/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N + D D+ + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPKAERTASRLLQLDGNSG---QLVDGTFKDVLELVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + ++ + R SK K G L+
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D A + + + + + + + ++ +G +PLPPYIA RP + D Y
Sbjct: 113 D---EFHAVMQARHDA--LFEIRFTAETVVLDILNQIGHMPLPPYIA--RPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G+ + +VTLHVGAGTF PV+VE+ DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDQALLEQIQAKGVDLAYVTLHVGAGTFQPVRVENIHDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + A+ + K+RGGR+++VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAVAATKARGGRVIAVGTTSVRSLESAAQDALKKGTELKPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ YRF+SYGD +
Sbjct: 286 IFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYEHTMAAYEHAVQQQYRFFSYGDAMFI 345
Query: 357 FQK 359
++
Sbjct: 346 RKQ 348
>gi|118589194|ref|ZP_01546601.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Stappia
aggregata IAM 12614]
gi|118438523|gb|EAV45157.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Stappia
aggregata IAM 12614]
Length = 357
Score = 453 bits (1166), Expect = e-125, Method: Composition-based stats.
Identities = 196/360 (54%), Positives = 247/360 (68%), Gaps = 6/360 (1%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDFDLP RIALRP PRDSAR++VV P ++SD V DLP L DA+V
Sbjct: 1 MRVDQFDFDLPNERIALRPARPRDSARMLVVRP--GEQPLLSDAGVRDLPQLLEPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI AQL G R I TLHMR P+ W + RP+K ++ GD + F +
Sbjct: 59 FNDTRVIPAQLEGTRLRGDISAG--IGATLHMRTGPDRWKAFVRPAKKLQLGDTVLF--E 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+RL A V +K +GE+LL F SG +L+ I+ VG IPLPPYIA+KR D +D DY
Sbjct: 115 GFGTRLTAEVTEKGYSGEVLLTFDRSGPDLDVAIASVGHIPLPPYIAQKRGEDDQDRKDY 174
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHFT LL L GI+ + VTLHVGAGTF+PVK EDT DH M
Sbjct: 175 QTIFAEKDGAVAAPTAGLHFTPELLQALSYRGIEQHRVTLHVGAGTFLPVKAEDTADHKM 234
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G + TA AL +VK RG ++VSVGTTSLR+LE++ + G+I ++G T+IFITPG
Sbjct: 235 HAEWGEVSEETAAALLAVKVRGNKVVSVGTTSLRILESSAQKTGVITAFAGETSIFITPG 294
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRF+A+D LM+NFHLP+STL MLVSA G++ + Y HAIS YRFYSYGD SLLF +
Sbjct: 295 YRFKAIDALMTNFHLPRSTLFMLVSALSGLDTMRHAYAHAISQEYRFYSYGDASLLFPQE 354
>gi|148825473|ref|YP_001290226.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae PittEE]
gi|166216724|sp|A5UAP2|QUEA_HAEIE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|148715633|gb|ABQ97843.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae PittEE]
Length = 363
Score = 453 bits (1166), Expect = e-125, Method: Composition-based stats.
Identities = 138/365 (37%), Positives = 203/365 (55%), Gaps = 17/365 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R S RL+ ++ I SD+ ++ D ++
Sbjct: 1 MRVSDFNFDLPDELIARYPKTDRVSCRLLQLNGENG---EIFHRTFSDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKIEVLVERMLDEHRFLAHIRSSKSPKEGAELFLGED 112
Query: 121 D-GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G++ V+ ++ + S L + +G +PLPPYI RP + D
Sbjct: 113 KLGENNGIKAVMKARHSSLFEVELSDKSTALLDVLQTIGHMPLPPYI--DRPDEEADKEC 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y+K+ G+VAAPTAGLHF NLL +L + G+ FVTLHVGAGTF PV+VE+ +DH+
Sbjct: 171 YQTVYSKVPGAVAAPTAGLHFDENLLEKLKAKGVNFEFVTLHVGAGTFQPVRVENIEDHV 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT------TEDGIINPWSGFT 293
MH+E + A+ + K G R+++VGTTS+R +E+A +I P+ T
Sbjct: 231 MHAEYVEVSQEVCNAIIATKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSDT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD
Sbjct: 291 SIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKQAVQEKYRFFSYGDA 350
Query: 354 SLLFQ 358
+ +
Sbjct: 351 MFINK 355
>gi|260596775|ref|YP_003209346.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cronobacter
turicensis z3032]
gi|260215952|emb|CBA28567.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase [Cronobacter
turicensis z3032]
Length = 356
Score = 453 bits (1166), Expect = e-125, Method: Composition-based stats.
Identities = 142/359 (39%), Positives = 206/359 (57%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F FDLP S IA P R + RL+ + ++ +DL LN D +V
Sbjct: 1 MRLTDFSFDLPESLIAHYPQAQRSACRLLSLDGPTGD---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDHRVLAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + + + V + ++ +G +PLPPYI +RP + D Y
Sbjct: 113 E---SVNATMTARHDA--LFEVQFNDERPVLDILNSIGHMPLPPYI--ERPDEEADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL RL + GI++ FVTLHVGAGTF PV+VE +DH+M
Sbjct: 166 QTVYSQKPGAVAAPTAGLHFDEPLLERLRAKGIEMAFVTLHVGAGTFQPVRVESIEDHVM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG ++V+VGTTS+R LE+A +D +I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLAAKARGNKVVAVGTTSVRSLESAAQAAQDALIAPFFGDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGYQYQVIDALVTNFHLPESTLIMLVSAFAGYKHTMNAYREAVKAEYRFFSYGDAMYIT 344
>gi|262402876|ref|ZP_06079437.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio sp.
RC586]
gi|262351658|gb|EEZ00791.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio sp.
RC586]
Length = 352
Score = 453 bits (1166), Expect = e-125, Method: Composition-based stats.
Identities = 135/363 (37%), Positives = 206/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N ++D D+ F+ D +V
Sbjct: 1 MQVSDFHFELPDELIARYPKAERTASRLLQLDGNSG---QLTDGTFKDVLGFVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + ++ + R SK K G L+
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D A + + + + + + + ++ +G +PLPPYI RP + D Y
Sbjct: 113 D---EFHAVMQARHDA--LFEIRFTAETVVLDILNQIGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ G+++ +VTLHVGAGTF PV+V++ DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDQALLEQIQVKGVELAYVTLHVGAGTFQPVRVDNIHDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT----TEDGIINPWSGFTNIF 296
H+E + A+ + K+RGGR+V+VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAVAATKARGGRVVAVGTTSVRSLESAAQDALQKGTELKPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ YRF+SYGD +
Sbjct: 286 IFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYEHTMAAYEHAVKEQYRFFSYGDAMFI 345
Query: 357 FQK 359
++
Sbjct: 346 RKQ 348
>gi|228473602|ref|ZP_04058354.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Capnocytophaga gingivalis ATCC 33624]
gi|228274974|gb|EEK13784.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Capnocytophaga gingivalis ATCC 33624]
Length = 349
Score = 453 bits (1166), Expect = e-125, Method: Composition-based stats.
Identities = 141/361 (39%), Positives = 193/361 (53%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F+F+LP +A P RD ARLMVVH I L D+ + + D V
Sbjct: 1 MKLSSFNFNLPKELLAEYPSENRDEARLMVVHRKTG---EIEHRLFKDVIEYFDDGDVFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + +I L ++ W V P++ I+ G+ L F
Sbjct: 58 LNNTKVFPARLYGHK----EKTNAKIEVFLLRELNKEQRLWDVLVDPARKIRIGNKLFF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D + L A VID + L F G ++ +G PLP YI RP++ D
Sbjct: 113 --DPEEELVAEVIDNTTSRGRTLRFLFDGSYEGFRNKLLELGHTPLPKYI--SRPVEPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ L+ RL GI +TLH+G GTF PV+VED
Sbjct: 169 EERYQTIYAKYEGAVAAPTAGLHFSKQLMKRLEIKGINFAELTLHIGLGTFNPVEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I Q +N K G R+ +VGTT +R +E++ + +NP+ G+TN F
Sbjct: 229 KHKMDSEEIIIPQEACQVVNKAKEAGKRVCAVGTTVMRAMESSVSSHNTLNPFIGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH PKSTLLM+VSAF G E Y+ A+ Y+F+SYGD L+
Sbjct: 289 IFPPYDFGVANAMITNFHTPKSTLLMMVSAFAGHELIMDAYEEAVKEKYKFFSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|312866079|ref|ZP_07726300.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus downei F0415]
gi|311098483|gb|EFQ56706.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus downei F0415]
Length = 342
Score = 453 bits (1166), Expect = e-125, Method: Composition-based stats.
Identities = 154/357 (43%), Positives = 211/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F+F LP IA P+ RDS++L+V+ N + D + LN DA+V
Sbjct: 1 MNTEDFNFHLPEDLIAQTPLEKRDSSKLLVIDHNK---HTMLDSHFDHILEELNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L+G + + L + W V A+P+K + G + F
Sbjct: 58 MNNTRVLPARLHGEK----PETHGHVEFLLLKNTQGDQWEVLAKPAKRLHVGTEVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL ATV+++ G ++ F GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLRATVLEELEHGGRIVQFHYEGIFLE-VLESLGEMPLPPYIHEK----LEDQEHY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+K+ ++TLHVG GTF PV V++ +DH M
Sbjct: 165 QTVYAKENGSAAAPTAGLHFTQELLEKIEAKGVKLVYLTLHVGLGTFRPVSVDNIEDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE AQ L VK+ GGRIV+VGTTS+R LET + +G I SG+TNIFI P
Sbjct: 225 HSEFYQFSEEAAQTLRQVKASGGRIVAVGTTSIRTLETIGNKFNGQIQADSGWTNIFIKP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ VD +NFHLPKSTL+MLVSAF G + + Y+HA+ YRF+S+GD +
Sbjct: 285 GYQFKLVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYKHAVEEHYRFFSFGDAMFV 341
>gi|191637650|ref|YP_001986816.1| S-adenosylmethionine tRNA ribosyltransferase-isomerase
[Lactobacillus casei BL23]
gi|190711952|emb|CAQ65958.1| S-adenosylmethionine tRNA ribosyltransferase-isomerase
[Lactobacillus casei BL23]
Length = 356
Score = 453 bits (1166), Expect = e-125, Method: Composition-based stats.
Identities = 139/357 (38%), Positives = 202/357 (56%), Gaps = 17/357 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FD+DLP IA P+ RD++RL+V++ + D D+ + DA+V
Sbjct: 16 QLSDFDYDLPHELIAQTPLKERDASRLLVLNSETG---EMQDKRFYDILDYFKPGDALVM 72
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L GV+ + L S + W +P++ G ++ F
Sbjct: 73 NDTRVMPARLYGVK----PETGAHMEVLLLNNTSGDDWETLMKPARKAPVGTVIDF---- 124
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G L+A V + G ++ F GI + +G PLPPYI K D YQ
Sbjct: 125 GDGLLKARVTKELEHGGRMIHFDYDGI-FMEILDKLGETPLPPYIKEK----LEDPEMYQ 179
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T Y+K GS AAPTAGLH+T +LL ++ G+K+ ++TLHVG GTF PV E+ + H MH
Sbjct: 180 TVYSKELGSAAAPTAGLHWTKDLLKKVQEKGVKLVYLTLHVGLGTFRPVVEENIEAHKMH 239
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPG 300
SE + A LN V+ GGRI++ GTTS+R LE T+ DG I SG+T+IFI PG
Sbjct: 240 SEFYRLTPEAAATLNDVRDNGGRIIATGTTSIRTLEAIGTKFDGAIKADSGWTDIFIKPG 299
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+++ VD ++NFHLPKSTL+MLV+AF G + Y+HAI YRF+S+GD ++
Sbjct: 300 YQWKVVDAFITNFHLPKSTLVMLVAAFTGRDTILNAYKHAIDEKYRFFSFGDAMFIY 356
>gi|258424065|ref|ZP_05686947.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A9635]
gi|257845686|gb|EEV69718.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus aureus A9635]
Length = 347
Score = 453 bits (1166), Expect = e-125, Method: Composition-based stats.
Identities = 146/356 (41%), Positives = 208/356 (58%), Gaps = 16/356 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++EFD+DLP S IA P+ RD +RL+V+ + D+ + D +V
Sbjct: 8 NIEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETG---EMKHLHFKDIIEYFRPGDTLVL 64
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 65 NDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF---- 116
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI + D YQ
Sbjct: 117 GNGKIIAECIKEMDQGGRIMRLHYEGI-LQERLDELGEMPLPPYIKERLD----DPDRYQ 171
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YAK GS AAPTAGLHFT LL+ + + G+ + FVTLHVG GTF PV V+D +DH MH
Sbjct: 172 TVYAKESGSAAAPTAGLHFTDELLTEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHEMH 231
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
SE + TA LN KS+G RI+SVGTTS R LET + SG+TNIFI PG+
Sbjct: 232 SEYYQMTQETANLLNDTKSKGHRIISVGTTSTRTLETIRRDYDKFVETSGWTNIFIYPGF 291
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 292 DFKAIDGQITNFHLPKSTLVMLVSAFSTRENVLNAYKTAVNLEYRFFSFGDAMLII 347
>gi|268592080|ref|ZP_06126301.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Providencia
rettgeri DSM 1131]
gi|291312475|gb|EFE52928.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Providencia
rettgeri DSM 1131]
Length = 356
Score = 453 bits (1165), Expect = e-125, Method: Composition-based stats.
Identities = 136/360 (37%), Positives = 205/360 (56%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R + RL+ + ++ + +D+ L D +V
Sbjct: 1 MRVSDFTFELPEELIAHYPQAERSACRLLSLDGGSG---QLTHGVFTDILEKLEHGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARLFGRKVS-----GGKIEVLIERMLDEHRVLAHVRASKAPKEGAELLLGED 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++AT++ + G + + ++ ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SVKATMVARH--GALFELRFDDERDVLSILNQIGHMPLPPYI--DRPDEESDKELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL L G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLEALRQKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++D +I P+ T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLACKARGNRVIAVGTTSVRSLESAAKASQDALIAPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGYEYQVIDALITNFHLPESTLIMLVSAFAGYKNTMNAYEEAVKQKYRFFSYGDAMFITP 345
>gi|57867143|ref|YP_188779.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus epidermidis RP62A]
gi|71153095|sp|Q5HNR1|QUEA_STAEQ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|57637801|gb|AAW54589.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus epidermidis RP62A]
Length = 341
Score = 453 bits (1165), Expect = e-125, Method: Composition-based stats.
Identities = 143/357 (40%), Positives = 208/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++FD+ LP S IA P+ RD +RL+V+ + ++ D+ + D +V
Sbjct: 1 MNIEDFDYHLPESLIAQTPLKNRDQSRLLVLSKDTG---ELTHLHFRDVIHYFEPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + ++ N W V +P+K IKKG L+F
Sbjct: 58 LNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKKGHRLNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++ A I++ G ++ GI L+ ++ +G +PLPPYI + D Y
Sbjct: 111 -GDGKIVAECIEELEQGGRIMRLHYEGI-LQERLDELGDMPLPPYIKERLD----DPDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ G+ + F+TLHVG GTF PV VE+ DDH M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTDDLLNKIKQKGVHIAFITLHVGLGTFRPVSVENIDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN K G R++SVGTTS R LET + SG+T+IFI PG
Sbjct: 225 HSEYYQMTQETADLLNKTKESGKRVISVGTTSTRTLETIRRDHPQFVATSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD L+
Sbjct: 285 FEFKAIDGLITNFHLPKSTLVMLVSAFSNKKYILNAYHKAVEMEYRFFSFGDAMLII 341
>gi|238752761|ref|ZP_04614230.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
rohdei ATCC 43380]
gi|238709019|gb|EEQ01268.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
rohdei ATCC 43380]
Length = 356
Score = 453 bits (1165), Expect = e-125, Method: Composition-based stats.
Identities = 143/360 (39%), Positives = 209/360 (58%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ + +DL L D +V
Sbjct: 1 MRVADFSFELPESLIAHYPQPQRSGCRLLSLDGPTGK---LTHGIFTDLLDKLEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + + SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKLEVLVERVLDDSRVLAHVKASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT++ + +T + + ++ ++ VG +PLPPYI RP + D Y
Sbjct: 113 E---SIRATMVARHDT--LFELRFDDERDVFAILNAVGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L GI++ FVTLHVGAGTF PV+V+ ++HIM
Sbjct: 166 QTVYSERPGAVAAPTAGLHFDEPLLAALREKGIEMAFVTLHVGAGTFQPVRVDTIEEHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+V+VGTTS+R LE+A TE+G+I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLACKARGKRVVAVGTTSVRSLESAAKATENGLIAPFFGDTCIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ VD L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD + +
Sbjct: 286 PGYDYQVVDALVTNFHLPESTLIMLVSAFAGYKNTMNAYQQAVTEQYRFFSYGDAMFISR 345
>gi|227550874|ref|ZP_03980923.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX1330]
gi|227179972|gb|EEI60944.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium TX1330]
Length = 347
Score = 453 bits (1165), Expect = e-125, Method: Composition-based stats.
Identities = 150/357 (42%), Positives = 208/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++FDFDLP IA P+ RD +RL+V+ + D ++ L+ DA+V
Sbjct: 6 LTTEDFDFDLPEELIAQTPLKDRDHSRLLVLDRKTG---EMKDKHFHEIIEELHPGDALV 62
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L ++W +P+K K G + F
Sbjct: 63 MNNTRVLPARLYGEK----PDTGAHLEVLLLTNTEGDTWETLIKPAKRAKVGTRISF--- 115
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A V ++ G ++ F GI LE + +G +PLPPYI + D Y
Sbjct: 116 -GDGRLQAVVKEELEHGGRIIDFEYEGIFLE-ILESLGEMPLPPYIKER----LEDPDRY 169
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + + G+++ ++TLHVG GTF PV V+ ++H M
Sbjct: 170 QTVYAKENGSAAAPTAGLHFTKELLDEIEAKGVELVYLTLHVGLGTFRPVSVDKIEEHHM 229
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A+ LN V+ GG+IV+VGTTS+R LET T+ +G I SG+T+IFITP
Sbjct: 230 HSEFYRLTEEAAERLNQVRKNGGKIVAVGTTSIRTLETIGTKFNGEIKADSGWTDIFITP 289
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+ V+ +NFHLPKSTL+MLVSAF G E T YQHAI YRF+S+GD +
Sbjct: 290 GYEFKVVEAFSTNFHLPKSTLVMLVSAFAGRELTLSAYQHAIDERYRFFSFGDAMFV 346
>gi|222151525|ref|YP_002560681.1| S-adenosylmethionine tRNA ribosyltransferase [Macrococcus
caseolyticus JCSC5402]
gi|254764282|sp|B9E717|QUEA_MACCJ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|222120650|dbj|BAH17985.1| S-adenosylmethionine tRNA ribosyltransferase [Macrococcus
caseolyticus JCSC5402]
Length = 340
Score = 453 bits (1165), Expect = e-125, Method: Composition-based stats.
Identities = 140/357 (39%), Positives = 206/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V EFDF+LP S IA P+ R ++RL+ ++ + I + +LN+ D +V
Sbjct: 1 MDVNEFDFNLPESLIAQTPLQDRTASRLLTLNKHTG---EIKHTNFKSIIDYLNTGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L GV+ +I + N W V +P+K + G + F
Sbjct: 58 LNDTKVMPARLFGVK----EDTGAKIEMLMLTE-HDNGWEVLIKPAKRVTIGTRISF--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ ++ A +++ + G ++ + GI L+ ++ +G +PLPPYI D Y
Sbjct: 110 -GEGKIVAICVEELDQGGRIMQLNYEGI-LQERLDELGLMPLPPYIKE----TLEDQSRY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GS AAPTAGLHFT +LL + + GI + ++TLHVG GTF PV V+D + H M
Sbjct: 164 QTVYARATGSAAAPTAGLHFTESLLEDIKAKGINIAYITLHVGLGTFRPVSVDDVESHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA+ LN + G RI++VGTTS R LET + G SG+T+IFI PG
Sbjct: 224 HSEYYEMSEETAKLLNDTRDSGNRIITVGTTSTRTLETIADDSGHFTAQSGWTDIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+AVD +++NFHLPKSTL+MLVS+ E Y A++ YRF+S+GD ++
Sbjct: 284 YSFKAVDAMITNFHLPKSTLVMLVSSLATKEFIMNAYNEAVNEKYRFFSFGDAMFIY 340
>gi|238765174|ref|ZP_04626106.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
kristensenii ATCC 33638]
gi|238696608|gb|EEP89393.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
kristensenii ATCC 33638]
Length = 356
Score = 453 bits (1165), Expect = e-125, Method: Composition-based stats.
Identities = 142/360 (39%), Positives = 210/360 (58%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ + +DL L D +V
Sbjct: 1 MRVADFSFELPESLIAHYPQPQRSGCRLLSLDGPTGT---LTHGIFTDLLDKLVPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + + SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKLEVLVERVLDDHRVLAHVKASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT++ + +T + + ++ ++ VG +PLPPYI RP + D Y
Sbjct: 113 E---SIRATMLARHDT--LFELRFDDERDVFTILNAVGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF +L+ L GI++ FVTLHVGAGTF PV+VE +DHIM
Sbjct: 166 QTVYSQRPGAVAAPTAGLHFDEPMLAALREKGIEMAFVTLHVGAGTFQPVRVETIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+V+VGTTS+R LE+A +++G+I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLACKARGNRVVAVGTTSVRSLESAAKASDNGLIAPFFGDTRIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY+++ VD L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD + +
Sbjct: 286 PGYQYQIVDALITNFHLPESTLIMLVSAFAGYKNTMNAYQQAVAEQYRFFSYGDAMFISR 345
>gi|116333839|ref|YP_795366.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus brevis ATCC 367]
gi|122269474|sp|Q03R37|QUEA_LACBA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|116099186|gb|ABJ64335.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Lactobacillus brevis ATCC 367]
Length = 344
Score = 453 bits (1165), Expect = e-125, Method: Composition-based stats.
Identities = 144/356 (40%), Positives = 209/356 (58%), Gaps = 17/356 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FD+DLP IA P+ RD++RL+V+ + D D+ L++ DA+V
Sbjct: 4 TLDDFDYDLPHELIAQTPIKQRDTSRLLVLDHQ---ANTLEDKHFYDILDELHAGDAVVM 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NN++V+ A+L G++ + L V + W +P+K ++ G + F
Sbjct: 61 NNSRVMPARLYGIK----PETGGHVEVLLLHNVEGDVWETLMKPAKRLRVGTTVTF---- 112
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G +L ATV ++ G L+ F GI + +G PLPPYI K D YQ
Sbjct: 113 GDGQLTATVTEEREDGIRLIEFHYDGI-FMEILEQLGETPLPPYIKEKLD----DPDRYQ 167
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YAK GS AAPTAGLH+T LL ++ + G+K+ ++TLHVG GTF PV+ + +DH MH
Sbjct: 168 TVYAKENGSAAAPTAGLHWTQELLDQVAAKGVKLVYITLHVGLGTFRPVEEANIEDHKMH 227
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPG 300
SE +D A LN V++ GGRI++ GTTS+R LET T+ G I P SG+T+IFI PG
Sbjct: 228 SEFYRLDEAAAATLNEVRANGGRIIATGTTSIRTLETIGTKFKGEIKPDSGWTDIFIKPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+++ V+ ++NFHLPKSTL+MLV+AF G ++ Y HAI YRF+S+GD +
Sbjct: 288 YQWQVVNAFITNFHLPKSTLVMLVAAFTGRDQILNAYHHAIEEKYRFFSFGDAMFI 343
>gi|251811045|ref|ZP_04825518.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus epidermidis BCM-HMP0060]
gi|251805421|gb|EES58078.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus epidermidis BCM-HMP0060]
Length = 354
Score = 453 bits (1165), Expect = e-125, Method: Composition-based stats.
Identities = 142/357 (39%), Positives = 208/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +++FD+ LP S IA P+ RD +RL+V+ + ++ D+ + D +V
Sbjct: 14 LNIEDFDYHLPESLIAQTPLKNRDQSRLLVLSKDTG---ELTHLHFRDVIYYFEPGDTLV 70
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + ++ N W V +P+K IKKG L+F
Sbjct: 71 LNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKKGHRLNF--- 123
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++ A I++ G ++ GI L+ ++ +G +PLPPYI + D Y
Sbjct: 124 -GDGKIVAECIEELEQGGRIMRLHYEGI-LQERLDELGEMPLPPYIKERLD----DPDRY 177
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ G+ + F+TLHVG GTF PV VE+ DDH M
Sbjct: 178 QTVYAKESGSAAAPTAGLHFTDDLLNKIKQKGVHIAFITLHVGLGTFRPVSVENIDDHEM 237
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN K G R++SVGTTS R LET + SG+T+IFI PG
Sbjct: 238 HSEYYQMTQETADLLNKTKESGKRVISVGTTSTRTLETIRRDHPQFVATSGWTDIFIYPG 297
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD L+
Sbjct: 298 FEFKAIDGLITNFHLPKSTLVMLVSAFSNKKYILNAYHKAVEMEYRFFSFGDAMLII 354
>gi|257887874|ref|ZP_05667527.1| queuosine biosynthesis protein [Enterococcus faecium 1,141,733]
gi|257893327|ref|ZP_05672980.1| queuosine biosynthesis protein [Enterococcus faecium 1,231,408]
gi|257896508|ref|ZP_05676161.1| queuosine biosynthesis protein [Enterococcus faecium Com12]
gi|257899488|ref|ZP_05679141.1| queuosine biosynthesis protein [Enterococcus faecium Com15]
gi|293379287|ref|ZP_06625433.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium PC4.1]
gi|293573018|ref|ZP_06683960.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium E980]
gi|257823928|gb|EEV50860.1| queuosine biosynthesis protein [Enterococcus faecium 1,141,733]
gi|257829706|gb|EEV56313.1| queuosine biosynthesis protein [Enterococcus faecium 1,231,408]
gi|257833073|gb|EEV59494.1| queuosine biosynthesis protein [Enterococcus faecium Com12]
gi|257837400|gb|EEV62474.1| queuosine biosynthesis protein [Enterococcus faecium Com15]
gi|291606920|gb|EFF36300.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium E980]
gi|292642083|gb|EFF60247.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium PC4.1]
Length = 343
Score = 453 bits (1165), Expect = e-125, Method: Composition-based stats.
Identities = 150/357 (42%), Positives = 208/357 (58%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++FDFDLP IA P+ RD +RL+V+ + D ++ L+ DA+V
Sbjct: 2 LTTEDFDFDLPEELIAQTPLKDRDHSRLLVLDRKTG---EMKDKHFHEIIEELHPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L ++W +P+K K G + F
Sbjct: 59 MNNTRVLPARLYGEK----PDTGAHLEVLLLTNTEGDTWETLIKPAKRAKVGTRISF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A V ++ G ++ F GI LE + +G +PLPPYI + D Y
Sbjct: 112 -GDGRLQAVVKEELEHGGRIIDFEYEGIFLE-ILESLGEMPLPPYIKER----LEDPDRY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + + G+++ ++TLHVG GTF PV V+ ++H M
Sbjct: 166 QTVYAKENGSAAAPTAGLHFTKELLDEIEAKGVELVYLTLHVGLGTFRPVSVDKIEEHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A+ LN V+ GG+IV+VGTTS+R LET T+ +G I SG+T+IFITP
Sbjct: 226 HSEFYRLTEEAAERLNQVRKNGGKIVAVGTTSIRTLETIGTKFNGEIKADSGWTDIFITP 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+ V+ +NFHLPKSTL+MLVSAF G E T YQHAI YRF+S+GD +
Sbjct: 286 GYEFKVVEAFSTNFHLPKSTLVMLVSAFAGRELTLSAYQHAIDERYRFFSFGDAMFV 342
>gi|158423932|ref|YP_001525224.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Azorhizobium caulinodans ORS 571]
gi|172047956|sp|A8I5Q2|QUEA_AZOC5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|158330821|dbj|BAF88306.1| S-adenosylmethionine [Azorhizobium caulinodans ORS 571]
Length = 354
Score = 453 bits (1165), Expect = e-125, Method: Composition-based stats.
Identities = 188/358 (52%), Positives = 248/358 (69%), Gaps = 4/358 (1%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLPP RIALRP PR+SARL+ V P + D ++DLP L DA+V
Sbjct: 1 MRVDAFDFDLPPERIALRPAEPRESARLLRVRP--GAAPELEDRTIADLPDLLQPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L+G R I TL R+S ++W+ +A+P+K + G+ + F
Sbjct: 59 VNDTKVIPARLDGTRTRAGGSTVA-IEATLIRRLSGSAWAAFAKPAKRLAVGETVVFAGA 117
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G LEA V+DK +GE+ F++SG EL+ I +G +PLPPYIA KRP D RD DY
Sbjct: 118 SG-GTLEARVLDKLESGEVHFAFALSGPELDAAIDAIGHMPLPPYIAAKRPEDDRDRTDY 176
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
Q +A+++GSVAAPTA LHFT +LL+++ + G+ Y VTLHVGAGTF+PVK EDT DH M
Sbjct: 177 QPVFARVEGSVAAPTASLHFTPDLLAKIAARGVSRYTVTLHVGAGTFLPVKAEDTTDHQM 236
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G + TA LN+VK+RGGRI++VG+T+ RL+ETA T +G I P+ G T+IFITPG
Sbjct: 237 HAEWGEVSPETAAELNAVKARGGRIITVGSTATRLIETAATPEGSIRPYLGETDIFITPG 296
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y FRA D++++NFHLP+STL+MLV+AF G E K+ Y HAI+ YRFYSYGD LL +
Sbjct: 297 YAFRASDVMLTNFHLPRSTLVMLVAAFVGHETQKRAYAHAIASGYRFYSYGDACLLER 354
>gi|297584755|ref|YP_003700535.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Bacillus
selenitireducens MLS10]
gi|297143212|gb|ADH99969.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Bacillus
selenitireducens MLS10]
Length = 351
Score = 453 bits (1165), Expect = e-125, Method: Composition-based stats.
Identities = 150/359 (41%), Positives = 211/359 (58%), Gaps = 16/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FD++LP IA P+ R+ +RL+V+ +S S + LN DA+V
Sbjct: 1 MDVSAFDYELPEELIAQTPLKNREESRLLVMERTTGD---LSHQTFSSVIDHLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G++ +I L + W +P+K +KKG ++ F
Sbjct: 58 LNDTKVIPARLFGIK----KETGAKIEVLLLKEQDDHVWEALVKPAKRLKKGTVISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L+A + G LL FS G+ ER + +G +PLPPYI + +D +D Y
Sbjct: 111 -GEGVLQAECTGELPEGRRLLRFSFDGVFHER-LDDLGEMPLPPYIQEQ--LDEKD--RY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA +GS AAPTAGLHFT +LL ++ + GI+ F+TLHVG GTF PV V+ +DH M
Sbjct: 165 QTVYAANRGSAAAPTAGLHFTPDLLEKIRAKGIRTVFLTLHVGLGTFRPVSVDTVEDHTM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E +A+AL ++RGGRI++VGTTS R LET + SG+T+IFI PG
Sbjct: 225 HAEFYQFSEASARALRETRARGGRIIAVGTTSARTLETIVRDHDDFAAASGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRF+ +D L++NFHLPKSTL+MLVSAF E Y+ A+ YRF+S+GD L+ +
Sbjct: 285 YRFQGIDGLLTNFHLPKSTLVMLVSAFSKREFVLDAYREAVRERYRFFSFGDAMLIANQ 343
>gi|15602097|ref|NP_245169.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pasteurella
multocida subsp. multocida str. Pm70]
gi|13431796|sp|P57832|QUEA_PASMU RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|12720458|gb|AAK02316.1| QueA [Pasteurella multocida subsp. multocida str. Pm70]
Length = 363
Score = 453 bits (1165), Expect = e-125, Method: Composition-based stats.
Identities = 136/363 (37%), Positives = 197/363 (54%), Gaps = 17/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ ++ I+ +D+ ++ D ++
Sbjct: 1 MRVSDFYFDLPDELIARYPKPDRTASRLLQLNGENG---EITHRTFADILDQIHEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + +S + + R SK K+G L
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKVEVLVERILSDTRFLAHVRSSKAPKEGAELWLGED 112
Query: 121 DGQSRLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+I + L + L + +G +PLPPYI RP + D
Sbjct: 113 KLGEHHGVKMIMVARHDTLFELEIAQKQTALLDVLQQIGHMPLPPYI--DRPDEEADKER 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y K+ G+VAAPTAGLHF LL++L + G+ FVTLHVGAGTF PV+VE +DH
Sbjct: 171 YQTVYNKVPGAVAAPTAGLHFDDALLAQLKAKGVNFAFVTLHVGAGTFQPVRVEQIEDHK 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT------TEDGIINPWSGFT 293
MH+E + A+ + K G R+++VGTTS+R +E+A E +I P+ T
Sbjct: 231 MHAEYVEVPQEVCDAIIATKQAGKRVIAVGTTSVRSVESAALATEEKGEHALITPYFSDT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG FR VD L++NFHLP+STL+MLVSAF G T + YQ A+ + YRF+SYGD
Sbjct: 291 SIFIYPGKTFRVVDCLITNFHLPESTLIMLVSAFAGYRHTMQAYQSAVENRYRFFSYGDA 350
Query: 354 SLL 356
+
Sbjct: 351 MFI 353
>gi|163760249|ref|ZP_02167332.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Hoeflea
phototrophica DFL-43]
gi|162282648|gb|EDQ32936.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Hoeflea
phototrophica DFL-43]
Length = 359
Score = 453 bits (1165), Expect = e-125, Method: Composition-based stats.
Identities = 210/361 (58%), Positives = 250/361 (69%), Gaps = 9/361 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF LP IALRP PRDSAR++ V P+ +SD +V DL A L DA+V
Sbjct: 1 MRVDLFDFHLPDESIALRPASPRDSARMLCVAPDGG----LSDAIVRDLAAQLQPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI AQL G R N + +S TLHMR P+ W + RP K IK GD L F
Sbjct: 57 FNDTRVIPAQLEGFRNRGDN--QVRVSATLHMRSGPDRWKAFVRPGKRIKPGDRLSFGGD 114
Query: 121 DG---QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
Q L+AT ++ GEI L+F +SG L+ I G IPLPPYIA KR DA+D
Sbjct: 115 GSACLQGVLDATAGERGEGGEIELIFDLSGPALDEAIMATGHIPLPPYIASKRGEDAQDR 174
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YA+ G+VAAPTAGLHFT L + L + GI +FVTLHVGAGTF+PVK +DT +
Sbjct: 175 KDYQTIYAREDGAVAAPTAGLHFTDALFASLDARGIVRHFVTLHVGAGTFLPVKADDTAE 234
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MHSEIG + A TA ALN V++ GGRIVSVGTTSLRLLE+A E+G I PWSG T+IFI
Sbjct: 235 HRMHSEIGHVSAETAAALNQVRASGGRIVSVGTTSLRLLESAADENGTIQPWSGPTDIFI 294
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFRAVD+LM+NFHLP+STL MLVSAFCG+E + Y HAI YRFYSYGD+SLLF
Sbjct: 295 TPGYRFRAVDVLMTNFHLPRSTLFMLVSAFCGLETMRAAYDHAIETGYRFYSYGDSSLLF 354
Query: 358 Q 358
+
Sbjct: 355 R 355
>gi|320528164|ref|ZP_08029329.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Solobacterium moorei F0204]
gi|320131512|gb|EFW24077.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Solobacterium moorei F0204]
Length = 345
Score = 452 bits (1164), Expect = e-125, Method: Composition-based stats.
Identities = 134/358 (37%), Positives = 200/358 (55%), Gaps = 16/358 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+FD++LP IA P+ R S+R++V+H + D D+ +L++ D +V
Sbjct: 4 KTSDFDYNLPEELIAQTPLLDRSSSRMLVIH---NTEKKYEDKHFYDIVDYLHAGDVLVR 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNT+VI A+L G + + L ++ + W +KV+K G I+ F
Sbjct: 61 NNTRVIPARLFGTK----EETGAHVELLLLRQLPDDVWECLVGNAKVVKLGTIISFH--- 113
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
RL A ++ G + GI + +G +PLPPYI K D YQ
Sbjct: 114 -DGRLRAECVEIGEKGLRKMRMIYDGI-FNEILDELGNVPLPPYIKEK----LNDPERYQ 167
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YAK++GS AAPTAGLHFT + ++L G+ V VTLHVG TF P+ ED +DH MH
Sbjct: 168 TVYAKVRGSAAAPTAGLHFTDEIFTKLKEKGVTVIDVTLHVGLSTFRPMDTEDVEDHDMH 227
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
SE+ ++ A LN+ K+ G RI ++GTTS+R LE+ G SG T +FI PGY
Sbjct: 228 SEVYYMSKEAADTLNAAKANGQRIFAIGTTSVRTLESVWNRFGKFEECSGETKLFIYPGY 287
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
++ +D +++NFHLPKSTL+M++++F G E T + Y+HA+ YRF+S+GD L+ +
Sbjct: 288 QWHTIDGMLTNFHLPKSTLIMMIASFVGYEFTLEAYRHAVQEKYRFFSFGDCMLITNE 345
>gi|262172189|ref|ZP_06039867.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
mimicus MB-451]
gi|261893265|gb|EEY39251.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
mimicus MB-451]
Length = 352
Score = 452 bits (1164), Expect = e-125, Method: Composition-based stats.
Identities = 134/363 (36%), Positives = 205/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N + D D+ + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPKAERTASRLLQLDGNSG---QLVDGTFKDVLGLVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + ++ + R SK K G L+
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D A + + + + + + + ++ +G +PLPPYI RP + D Y
Sbjct: 113 D---EFHAVMQARHDA--LFEIRFTAETVVLDILNQIGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G+++ +VTLHVGAGTF PV+VE+ DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDQVLLEQIQAKGVELAYVTLHVGAGTFQPVRVENIHDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + A+ + K+RGGR+++VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAVAATKARGGRVIAVGTTSVRSLESAAQDALKKGTELKPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ YRF+SYGD +
Sbjct: 286 IFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYEHTMAAYEHAVQQQYRFFSYGDAMFI 345
Query: 357 FQK 359
++
Sbjct: 346 RKQ 348
>gi|26987568|ref|NP_742993.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
putida KT2440]
gi|37999650|sp|Q88PL8|QUEA_PSEPK RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|24982243|gb|AAN66457.1|AE016275_2 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
putida KT2440]
Length = 349
Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats.
Identities = 143/358 (39%), Positives = 202/358 (56%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R +RL+V+ ++ DL +L D +V
Sbjct: 1 MRVADFSFELPDSLIARHPLAERHGSRLLVLDGPTGA---LAHRQFPDLLDYLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G ++
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEVLVERVLDSHRVLAHVRASKAPKVGAVILI--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
EA ++ + +T L E+ + VG +PLPPYI RP + D Y
Sbjct: 110 --DGGGEAEMVARHDTLFELRFTE----EVLPLLDRVGHMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL ++ G++ FVTLHVGAGTF PV+V+ +DH M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDEALLEKIADKGVERAFVTLHVGAGTFQPVRVDKIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A+ + ++RGGR+++VGTTS+R LE+A DG++ +SG T+IFI PG
Sbjct: 222 HKEWLEVGQDVVDAIEACRARGGRVIAVGTTSVRSLESAAR-DGVLKAFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y A+ H YRF+SYGD + +
Sbjct: 281 RPFHVVDCLVTNFHLPESTLLMLVSAFAGYPETMAAYAAAVEHGYRFFSYGDAMFITR 338
>gi|329889500|ref|ZP_08267843.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Brevundimonas diminuta ATCC 11568]
gi|328844801|gb|EGF94365.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Brevundimonas diminuta ATCC 11568]
Length = 364
Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats.
Identities = 195/366 (53%), Positives = 246/366 (67%), Gaps = 12/366 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLP + IALRP PRDSARL+VV + ++ DLP FL DA+V
Sbjct: 1 MRTSDFDFDLPEACIALRPADPRDSARLLVVKGGD-----LQHRIIRDLPDFLQPGDALV 55
Query: 61 FNNTKVITAQLNGVRFCHINRRE---KEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
FN+T+VI A+L+GVR E + TLH R +P+ WS + +P K +K GD + F
Sbjct: 56 FNDTRVIPARLSGVRHRTAPEGELLSVPVEATLHHRDAPDVWSAFMKPGKRLKVGDRVRF 115
Query: 118 FSQDGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
++ +++A + K G + L F ++G L+ I VG +PLPPYIA KR D
Sbjct: 116 GREEDNACLLGQVDAEITAKGEDGLVTLRFDLAGPVLDDAIREVGVMPLPPYIAAKRAED 175
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
+D DYQT +A+ GSVAAPTAGLHFT LL + + G+ + VTLHVGAGTF+PVK +
Sbjct: 176 DQDLKDYQTVFAEHDGSVAAPTAGLHFTPALLDAIRARGVTTHAVTLHVGAGTFLPVKAD 235
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
DT DH MHSE G + A TA ALN+V++ GGRIV VGTTSLRLLE+AT EDG+I P+ G T
Sbjct: 236 DTADHKMHSEWGEVSAETAAALNAVRAAGGRIVCVGTTSLRLLESATGEDGVIQPFHGDT 295
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFITPGYRFRA D+LM+NFHLPKSTL MLVSAF G+E + Y HAI YRFYSYGD
Sbjct: 296 AIFITPGYRFRACDVLMTNFHLPKSTLFMLVSAFAGLETMRAAYAHAIDSGYRFYSYGDG 355
Query: 354 SLLFQK 359
SLLF++
Sbjct: 356 SLLFRE 361
>gi|260893432|ref|YP_003239529.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Ammonifex
degensii KC4]
gi|260865573|gb|ACX52679.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Ammonifex
degensii KC4]
Length = 343
Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats.
Identities = 146/357 (40%), Positives = 201/357 (56%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +F++ LP IA P+ RD +RLMVV+ + L DLP +L D +V
Sbjct: 3 LKRSDFEYYLPKELIAQEPLPERDKSRLMVVYRDR---EEFEHRLFRDLPEYLVPGDVLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N T+V+ A+L GV+ ++ L ++ P+ W V RP + + +G + F
Sbjct: 60 LNRTRVLPARLYGVK----EDTGGKVEVLLLRQLEPDLWEVLVRPGRRVPEGTRIVF--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L V+ + +G L+ F+ G + + +G IPLPPYI RK Y
Sbjct: 113 -GGGLLRGEVLSRLESGGRLVRFTYEG-DFFALLHQLGEIPLPPYIKRKLAE----PERY 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA GS AAPTAGLHFT LL +L G++V +TLH+G TF PVK ED H M
Sbjct: 167 QTVYASEPGSAAAPTAGLHFTPELLQKLQEKGVEVVTLTLHIGLDTFRPVKEEDITAHRM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA+A+N K G RIV+VGTT +R LE+ E G + GFT++FI PG
Sbjct: 227 HSEEYHLPEATAEAVNRAKEEGRRIVAVGTTVVRCLESVADERGRVRAGRGFTDLFIYPG 286
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YRF+ VD L++NFHLP STLLMLV+AF G E+ + Y A+ YRF+S+GD L+
Sbjct: 287 YRFKVVDALVTNFHLPGSTLLMLVAAFAGREKILRAYAEAVRLRYRFFSFGDAMLIL 343
>gi|262165052|ref|ZP_06032789.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
mimicus VM223]
gi|262024768|gb|EEY43436.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
mimicus VM223]
Length = 352
Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats.
Identities = 134/363 (36%), Positives = 205/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N + D D+ + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPKAERTASRLLQLDGNGG---QLVDGTFKDVLGLVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + ++ + R SK K G L+
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D A + + + + + + + ++ +G +PLPPYI RP + D Y
Sbjct: 113 D---EFHAVMQARHDA--LFEIRFTAETVVLDILNQIGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G+++ +VTLHVGAGTF PV+VE+ DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDQVLLEQIQAKGVELAYVTLHVGAGTFQPVRVENIHDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + A+ + K+RGGR+++VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAVAATKARGGRVIAVGTTSVRSLESAAQDALKKGTELKPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ YRF+SYGD +
Sbjct: 286 IFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYEHTMAAYEHAVEEQYRFFSYGDAMFI 345
Query: 357 FQK 359
++
Sbjct: 346 RKQ 348
>gi|167031890|ref|YP_001667121.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
putida GB-1]
gi|189038874|sp|B0KPG6|QUEA_PSEPG RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|166858378|gb|ABY96785.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Pseudomonas putida GB-1]
Length = 349
Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats.
Identities = 145/358 (40%), Positives = 203/358 (56%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R +RL+V+ +S DL +L D +V
Sbjct: 1 MRVADFSFELPDSLIARHPLAERHGSRLLVLDGPTGA---LSHRQFPDLLDYLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G ++
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEVLVERVLDSHRVLAHVRASKAPKVGAVILI--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
EA ++ + +T L E+ + VG +PLPPYI RP + D Y
Sbjct: 110 --DGGGEAEMVARHDTLFELRFTE----EVLPLLDRVGHMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL ++ + G++ FVTLHVGAGTF PV+V+ +DH M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDEALLEKIAAKGVERAFVTLHVGAGTFQPVRVDKIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A+ + ++RGGR+V+VGTTS+R LE+A DG++ +SG T+IFI PG
Sbjct: 222 HKEWLEVGQDVVDAIEACRARGGRVVAVGTTSVRSLESAAR-DGVLKAFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y A+ H YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAVEHGYRFFSYGDAMFITR 338
>gi|269941125|emb|CBI49511.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase
[Staphylococcus aureus subsp. aureus TW20]
Length = 341
Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 207/357 (57%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EFD+DLP S IA P+ RD +RL+V+ + D+ + D +V
Sbjct: 1 MNIEEFDYDLPESLIAQTPLKDRDHSRLLVMDRETG---EMKHLHFKDIIEYFRPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + ++ N W V +P+K IK G+ L+F
Sbjct: 58 LNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKVGNKLNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++ A I + + G ++ GI L+ ++ +G +PLPPYI + D Y
Sbjct: 111 -GNGKIIAECIKEMDQGGRIMRLHYEGI-LQERLDELGEMPLPPYIKERLD----DPDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + + G+ + FVTLHVG GTF PV V+D +DH M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTDELLIEIKNKGVNIAFVTLHVGLGTFRPVSVDDVNDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN KS+G RI+SVGTTS R LET + SG TNIFI PG
Sbjct: 225 HSEYYQMTQETADLLNDTKSKGHRIISVGTTSTRTLETIRRDHDKFVETSGCTNIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+A+D ++NFHLPKSTL+MLVSAF E Y+ A++ YRF+S+GD L+
Sbjct: 285 FDFKAIDGQITNFHLPKSTLVMLVSAFSSRENVLNAYKTAVNLEYRFFSFGDAMLII 341
>gi|123443376|ref|YP_001007350.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|166218757|sp|A1JNT4|QUEA_YERE8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|122090337|emb|CAL13204.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
enterocolitica subsp. enterocolitica 8081]
Length = 362
Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats.
Identities = 142/360 (39%), Positives = 208/360 (57%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ + +DL L D +V
Sbjct: 1 MRVADFSFELPESLIAHYPQPQRSGCRLLSLDGPTGA---LTHGIFTDLLDKLVPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + + SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKLEVLVERVLDDHRVLAHVKASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT++ + +T + + ++ + VG +PLPPYI RP + D Y
Sbjct: 113 E---SIHATMLARHDT--LFELRFDDERDVFTILDAVGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF +L+ L GI++ FVTLHVGAGTF PV+VE +DHIM
Sbjct: 166 QTVYSQRLGAVAAPTAGLHFDEPMLAALREKGIEMAFVTLHVGAGTFQPVRVETIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+V+VGTTS+R LE+A +++G+I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLACKARGNRVVAVGTTSVRSLESAAKSSDNGLIAPFFGDTKIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ VD L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD + +
Sbjct: 286 PGYHYQVVDALITNFHLPESTLIMLVSAFAGYKNTMNAYQQAVAEQYRFFSYGDAMFISR 345
>gi|229846333|ref|ZP_04466441.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae 7P49H1]
gi|229810426|gb|EEP46144.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae 7P49H1]
Length = 363
Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats.
Identities = 138/365 (37%), Positives = 202/365 (55%), Gaps = 17/365 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R S RL+ ++ I SD+ ++ D ++
Sbjct: 1 MRVSDFNFDLPDELIARYPKTDRVSCRLLQLNGENG---EIFHRTFSDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKIEVLVERMLDEHLFLAHIRSSKSPKEGAELFLGED 112
Query: 121 D-GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G++ V+ + + S L + +G +PLPPYI RP + D
Sbjct: 113 KLGENNGIKAVMKARHGALFEVELSDKSTALLDVLQAIGHMPLPPYI--DRPDEEADQEC 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y+K+ G+VAAPTAGLHF NLL +L + G+ FVTLHVGAGTF PV+VE+ +DH+
Sbjct: 171 YQTVYSKVPGAVAAPTAGLHFDENLLEKLQAKGVNFEFVTLHVGAGTFQPVRVENIEDHV 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT------TEDGIINPWSGFT 293
MH+E + A+ + K G R+++VGTTS+R +E+A +I P+ T
Sbjct: 231 MHAEYVEVSQEVCNAIIATKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSDT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD
Sbjct: 291 SIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKQAVQEKYRFFSYGDA 350
Query: 354 SLLFQ 358
+ +
Sbjct: 351 MFINK 355
>gi|238783641|ref|ZP_04627662.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
bercovieri ATCC 43970]
gi|238715519|gb|EEQ07510.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
bercovieri ATCC 43970]
Length = 361
Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats.
Identities = 142/360 (39%), Positives = 209/360 (58%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ + +DL L D +V
Sbjct: 6 MRVADFSFELPESLIAHYPQSQRSGCRLLSLDGPTGT---LTHGIFTDLLDKLEPGDLLV 62
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + + SK K G L
Sbjct: 63 FNNTRVIPARLFGRKAS-----GGKLEVLVERVLDDHRVLAHVKASKSPKPGTELLLGDD 117
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT++ + +T + + ++ ++ VG +PLPPYI RP + D Y
Sbjct: 118 E---SIRATMLARHDT--LFELRFDDERDVFTILNAVGHMPLPPYI--DRPDEDADRELY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF +L+ L GI++ FVTLHVGAGTF PV+V+ ++HIM
Sbjct: 171 QTVYSERPGAVAAPTAGLHFDEPMLAALREKGIEMAFVTLHVGAGTFQPVRVDTIEEHIM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+V+VGTTS+R LE+A TE+G+I P+ G T IFI
Sbjct: 231 HSEYAEVPQQVVDAVLACKARGKRVVAVGTTSVRSLESAAKATENGLIAPFFGDTRIFIY 290
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ VD L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD + +
Sbjct: 291 PGYEYQVVDALVTNFHLPESTLIMLVSAFAGYKNTMNAYQQAVAEQYRFFSYGDAMFISR 350
>gi|156935046|ref|YP_001438962.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cronobacter
sakazakii ATCC BAA-894]
gi|166216721|sp|A7MEL5|QUEA_ENTS8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|156533300|gb|ABU78126.1| hypothetical protein ESA_02897 [Cronobacter sakazakii ATCC BAA-894]
Length = 356
Score = 451 bits (1162), Expect = e-125, Method: Composition-based stats.
Identities = 141/359 (39%), Positives = 206/359 (57%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP S IA P R + RL+ + ++ +DL LN D +V
Sbjct: 1 MRLTDFSFELPESLIAHYPQAQRSACRLLSLDGPTGD---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDHRVLAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + + + V + ++ +G +PLPPYI +RP + D Y
Sbjct: 113 E---SVNATMTARHDA--LFEVQFNDARPVLDILNSIGHMPLPPYI--ERPDEEADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL RL + GI++ FVTLHVGAGTF PV+VE +DH+M
Sbjct: 166 QTVYSQKPGAVAAPTAGLHFDEPLLERLRAKGIEMAFVTLHVGAGTFQPVRVESIEDHVM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG ++V+VGTTS+R LE+A +D +I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLAAKARGNKVVAVGTTSVRSLESAAQAAQDALIAPFFGDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGYQYKVIDALVTNFHLPESTLIMLVSAFAGYKHTMNAYREAVKAEYRFFSYGDAMYIT 344
>gi|260771416|ref|ZP_05880341.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
furnissii CIP 102972]
gi|260613542|gb|EEX38736.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
furnissii CIP 102972]
Length = 352
Score = 451 bits (1162), Expect = e-125, Method: Composition-based stats.
Identities = 134/363 (36%), Positives = 203/363 (55%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P+ R ++RL+ + N + D D+ + +D +V
Sbjct: 1 MQVSDFHFELPDELIARYPMAERTASRLLQLDGNTG---ELVDGTFKDVLNCVEPDDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + +S + R SK K G L
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKLEVLVERMLDEHSILAHVRCSKPPKPGTELFLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D A + + + + + + + ++ +G +PLPPYI RP + D Y
Sbjct: 113 D---EFHAVMDARHDA--LFEIRFTAETVVLDILNQIGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G++ +VTLHVGAGTF PV+V++ +DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDQALLEQIKAKGVEFAYVTLHVGAGTFQPVRVDNINDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + A+ + K+RGGRI++VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAIAATKARGGRIIAVGTTSVRSLESAAQDALKKGTELVPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY ++ VD L++NFHLP+STL+MLVSAF G T Y HA+ YRF+SYGD +
Sbjct: 286 IYPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYAHTMAAYDHAVKQQYRFFSYGDAMFI 345
Query: 357 FQK 359
++
Sbjct: 346 RKR 348
>gi|242242912|ref|ZP_04797357.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus epidermidis W23144]
gi|242233627|gb|EES35939.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus epidermidis W23144]
Length = 354
Score = 451 bits (1162), Expect = e-125, Method: Composition-based stats.
Identities = 141/357 (39%), Positives = 208/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +++FD+ LP S IA P+ RD +RL+V+ + ++ D+ + D +V
Sbjct: 14 LNIEDFDYHLPESLIAQTPLKNRDQSRLLVLRKDTG---EMTHLHFRDVIHYFEPGDTLV 70
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + ++ N W V +P+K IKKG L+F
Sbjct: 71 LNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKKGHRLNF--- 123
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++ A I++ G ++ GI L+ ++ +G +PLPPYI + D Y
Sbjct: 124 -GDGKIVAECIEELEQGGRIMRLHYEGI-LQERLDELGEMPLPPYIKERLD----DPDRY 177
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ G+ + F+TLHVG GTF PV V++ DDH M
Sbjct: 178 QTVYAKESGSAAAPTAGLHFTDDLLNKIEQKGVHIAFITLHVGLGTFRPVSVDNIDDHEM 237
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN K G R++SVGTTS R LET + SG+T+IFI PG
Sbjct: 238 HSEYYQMTQKTADLLNQTKENGKRVISVGTTSTRTLETIRRDHPQFVATSGWTDIFIYPG 297
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD L+
Sbjct: 298 FEFKAIDGLITNFHLPKSTLVMLVSAFSSKKYILNAYHKAVEMEYRFFSFGDAMLII 354
>gi|149375025|ref|ZP_01892798.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Marinobacter algicola DG893]
gi|149360914|gb|EDM49365.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Marinobacter algicola DG893]
Length = 364
Score = 451 bits (1162), Expect = e-125, Method: Composition-based stats.
Identities = 142/356 (39%), Positives = 211/356 (59%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R ++RL+ + I +DLP+ L D +V
Sbjct: 1 MNVSDFHFDLPDELIARYPLKERSASRLLSLDGLSGD---IRHLRFTDLPSLLQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + ++ + + + + R SK +K+G + +
Sbjct: 58 FNDTRVIPARLFGRKE-----TGGQVEVLVERVLGEHDILAHVRASKALKEGQKVLL--E 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DG + + + S + + +G +PLPPY+ RP ++ D Y
Sbjct: 111 DGTP-----LRMSGRDDALFHLHCDSDEPVLDVLERIGHMPLPPYV--DRPDESSDRERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF +L+ L S+G++ FVTLHVGAGTF PV+VE +DH+M
Sbjct: 164 QTVYAREAGAVAAPTAGLHFDDRILAELESMGVETAFVTLHVGAGTFQPVRVEGIEDHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE+ + T A+N+ ++RGGR+V+VGTTS+R LE+A+ G++ P+ G T+IFI PG
Sbjct: 224 HSEVAHVPQATVDAVNAARARGGRVVAVGTTSVRSLESASR-GGVVRPFQGETDIFIYPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF+ VD +++NFHLP+STL+MLVSAF G + YQ A++ YRF+SYGD +
Sbjct: 283 YRFQTVDAMVTNFHLPESTLIMLVSAFAGYQNVMSAYQAAVAECYRFFSYGDAMFI 338
>gi|293392578|ref|ZP_06636898.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Serratia
odorifera DSM 4582]
gi|291424980|gb|EFE98189.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Serratia
odorifera DSM 4582]
Length = 356
Score = 451 bits (1162), Expect = e-125, Method: Composition-based stats.
Identities = 140/360 (38%), Positives = 208/360 (57%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP S IA P R RL+ + ++ + +DL L + D +V
Sbjct: 1 MRVADFSFDLPESLIARYPQPQRSGCRLLQLDGPTGK---LTHGVFTDLLDQLEAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + R SK K G L
Sbjct: 58 FNNTRVIPARIFGRKAS-----GGKIEVLVERVLDDHRVLAHVRASKAPKPGAALLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D + AT++ + +T + + ++ ++ VG +PLPPYI RP + D Y
Sbjct: 113 D---SIPATMVARHDT--LFELRFDDPRDVFTILNAVGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L G+++ FVTLHVGAGTF PV+VE ++H+M
Sbjct: 166 QTVYSQKPGAVAAPTAGLHFDEPLLAALREKGVEMAFVTLHVGAGTFQPVRVETIEEHVM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
H+E + A+ + K+RG R+V+VGTTS+R LE+A ++D I P+ G T IFI
Sbjct: 226 HAEYAEVPQEVVDAVLACKARGKRVVAVGTTSVRSLESAAKASQDAPIAPFFGDTRIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ +D L++NFHLP+STL+MLVSAF G + T Y+ A++ YRF+SYGD + +
Sbjct: 286 PGYHYQVIDALITNFHLPESTLIMLVSAFAGYQNTMNAYRQAVAEQYRFFSYGDAMFISR 345
>gi|309972610|gb|ADO95811.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queuosine
biosynthesis protein) [Haemophilus influenzae R2846]
Length = 363
Score = 451 bits (1162), Expect = e-125, Method: Composition-based stats.
Identities = 139/365 (38%), Positives = 204/365 (55%), Gaps = 17/365 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R S RL+ ++ IS SD+ ++ D ++
Sbjct: 1 MRVSDFNFDLPDELIARYPKIDRVSCRLLQLNGENG---EISHRTFSDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKIEVLVERMLDEHRFLAHIRSSKSPKEGAELFLGED 112
Query: 121 D-GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G++ V+ + + S L + +G +PLPPYI RP + D
Sbjct: 113 KLGENNGIKAVMKARHDALFEVELSDKSTALLDVLQTIGHMPLPPYI--DRPDEEADQEC 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y+K+ G+VAAPTAGLHF NLL +L + G+ FVTLHVGAGTF PV+VE+ +DH+
Sbjct: 171 YQTVYSKVPGAVAAPTAGLHFDENLLEKLKAKGVNFEFVTLHVGAGTFQPVRVENIEDHV 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT------TEDGIINPWSGFT 293
MH+E + A+ + K G R+++VGTTS+R +E+A +I P+ T
Sbjct: 231 MHAEYVEVSQEVCNAIIATKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSDT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + T Y+ A+ + YRF+SYGD
Sbjct: 291 SIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKSAVENHYRFFSYGDA 350
Query: 354 SLLFQ 358
+ +
Sbjct: 351 MFITK 355
>gi|157376028|ref|YP_001474628.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Shewanella
sediminis HAW-EB3]
gi|157318402|gb|ABV37500.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Shewanella
sediminis HAW-EB3]
Length = 345
Score = 451 bits (1162), Expect = e-125, Method: Composition-based stats.
Identities = 138/360 (38%), Positives = 199/360 (55%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R S+RL+ + N ++D+ +D+ +N D +V
Sbjct: 1 MRVTDFSFDLPDELIARYPMANRTSSRLLSLEGNTGK---LADNQFTDILNMVNPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK K I+
Sbjct: 58 FNNTRVIPARLFGQKI-----TGGKLEILVERMLDDKRILAHVRCSKSPKADSIICL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
E ++ + + + + S + + VG +PLPPYI RP + D Y
Sbjct: 110 --DGDYEMKMLGRHDA--LFELELQSDKTILEVLEEVGHMPLPPYI--DRPDEDADKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL L G+ FVTLHVGAGTF PVKV++ +H M
Sbjct: 164 QTVYNQNPGAVAAPTAGLHFDDALLKALSDKGVDTAFVTLHVGAGTFQPVKVDNILEHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFITP 299
HSE + + K+ G R+++VGTTS+R LE+A +G + + T+IFI P
Sbjct: 224 HSEWAEVSQEVVAKVAQTKANGKRVIAVGTTSVRSLESAAKASEGELKEFCSDTDIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY F+ VD +++NFHLP+STL+ML+SAF G +E K YQHAI+ YRF+SYGD + +K
Sbjct: 284 GYEFKVVDAMVTNFHLPESTLIMLLSAFAGFDEVKNAYQHAIAQKYRFFSYGDAMFVTKK 343
>gi|296101526|ref|YP_003611672.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterobacter cloacae subsp. cloacae ATCC 13047]
gi|295055985|gb|ADF60723.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterobacter cloacae subsp. cloacae ATCC 13047]
Length = 356
Score = 451 bits (1162), Expect = e-125, Method: Composition-based stats.
Identities = 140/359 (38%), Positives = 206/359 (57%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP + IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVADFSFELPETLIAHYPMPERSSCRLLSLDGPTG---ELTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++AT+ + + + V + ++ +G +PLPPYI +RP + D Y
Sbjct: 113 E---SIKATMTARHDA--LFEVEFNDERTVLDILNAIGHMPLPPYI--ERPDEEADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSQKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDSIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+V+VGTTS+R LE+A + +I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLAAKARGSRVVAVGTTSVRSLESAAQAAQKDLIEPFFGDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGYQYKVIDALVTNFHLPESTLIMLVSAFAGYQHTMAAYKSAVEQKYRFFSYGDAMFIT 344
>gi|256822291|ref|YP_003146254.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Kangiella
koreensis DSM 16069]
gi|256795830|gb|ACV26486.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Kangiella
koreensis DSM 16069]
Length = 365
Score = 451 bits (1161), Expect = e-125, Method: Composition-based stats.
Identities = 136/358 (37%), Positives = 202/358 (56%), Gaps = 19/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++F FDLP IA P R ++RL+ + + +L LN ND +V
Sbjct: 1 MRLEDFHFDLPDELIARYPTEQRSASRLLCLDGQSGA---VEHKHFYELVDLLNPNDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + ++ + S + R ++ K G
Sbjct: 58 FNDTRVIPARLFGQKV-----TGGKLEILIERLDSDVEAIAHVRSNRTPKPGSEFVL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
++ + + + L + + + ++ VG +PLPPYI R + D Y
Sbjct: 110 --ENGFKVLITGRKEA---LFALQLQEGDWQTVMTAVGHMPLPPYI--DRADELSDKERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K+ G+VAAPTAGLHF LL ++ + GI FVTLHVGAGTF PV+VE+ +H M
Sbjct: 163 QTVYSKVDGAVAAPTAGLHFDDALLEKIGNKGIDSTFVTLHVGAGTFSPVRVENITEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + +N+ +++GGR+++VGTTS+R LE+A+ +G I P G T+IFI PG
Sbjct: 223 HSEWFEVSQEVCDKVNAARAKGGRVIAVGTTSVRCLESASA-NGYIQPHMGETDIFIYPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y+FR+VD L++NFHLP+STL+MLVSAF G + Y A+ AYRF+SYGD+ + Q
Sbjct: 282 YQFRSVDALITNFHLPESTLMMLVSAFAGKDHIMNAYNEAVKEAYRFFSYGDSMFIHQ 339
>gi|313669079|ref|YP_004049363.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
lactamica ST-640]
gi|313006541|emb|CBN88005.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Neisseria lactamica 020-06]
Length = 346
Score = 451 bits (1161), Expect = e-125, Method: Composition-based stats.
Identities = 152/360 (42%), Positives = 208/360 (57%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P+ + + D + DLP ++ D +V
Sbjct: 1 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPD----MPLQDRVFGDLPDYVGEGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 109 --EGGIRAVMVGR--EGELFCLCFEGGQTVYELLEQNGHLPLPPYI--ERAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+VE ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVEKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + T A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 223 HSEWFEVPSETVAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRF D L++NFHLPKSTLLMLVSAF G+ + Y++A+ H YRF+SYGD +L +
Sbjct: 283 YRFNVADRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEHEYRFFSYGDAMILGRNE 342
>gi|51595277|ref|YP_069468.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pseudotuberculosis IP 32953]
gi|186894294|ref|YP_001871406.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pseudotuberculosis PB1/+]
gi|81640225|sp|Q66DW6|QUEA_YERPS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|238691412|sp|B2K6S5|QUEA_YERPB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|51588559|emb|CAH20167.1| S-adenosylmethionine:tRNA (m6t6A37) ribosyltransferase-isomerase
[Yersinia pseudotuberculosis IP 32953]
gi|186697320|gb|ACC87949.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Yersinia
pseudotuberculosis PB1/+]
Length = 356
Score = 451 bits (1161), Expect = e-125, Method: Composition-based stats.
Identities = 141/360 (39%), Positives = 208/360 (57%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP + IA P R RL+ + ++ + +DL L D +V
Sbjct: 1 MRVADFSFELPEALIAHYPQPQRSGCRLLSLDGPTGT---LTHGIFTDLLDKLAPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + + SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKLEVLVERVLDDHRVLAHVKASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT++ + +T + + ++ ++ VG +PLPPYI RP + D Y
Sbjct: 113 E---SIRATMLARHDT--LFELCFDDERDVFTILNAVGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF +L+ L GI++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSQRPGAVAAPTAGLHFDEPMLAALQEKGIEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+V+VGTTS+R LE+A E+G+I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLACKARGKRVVAVGTTSVRSLESAAKAAENGLIAPFFGDTRIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ VD L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD + +
Sbjct: 286 PGYHYQVVDALVTNFHLPESTLIMLVSAFAGYKNTMNAYQQAVAEQYRFFSYGDAMFISR 345
>gi|256420574|ref|YP_003121227.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Chitinophaga pinensis DSM 2588]
gi|256035482|gb|ACU59026.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Chitinophaga pinensis DSM 2588]
Length = 349
Score = 451 bits (1161), Expect = e-125, Method: Composition-based stats.
Identities = 135/361 (37%), Positives = 197/361 (54%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F FDLP + IA P RD ARLMVV+ I + D+ + N D +V
Sbjct: 1 MKLSQFRFDLPLNLIAQHPSKTRDEARLMVVNRATGK---IEHKVFRDIINYFNDKDVMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + +I L ++ + W V P++ I+ G+ L+F
Sbjct: 58 VNNTKVFPARLYGRK----EKTGAKIEVFLLRELNKQNRLWDVIVDPARKIRVGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIE--LERQISLVGTIPLPPYIARKRPIDARD 176
+ L A VID + + F G + ++ + +G PLP YI RK + D
Sbjct: 114 DDE---SLVAEVIDNTTSRGRTIRFLFEGDDNEFKQVLDTLGETPLPKYIKRK--PEEED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ L+ RL G+K VTLH G GTF P++VED
Sbjct: 169 KERYQTVYAKHEGAVAAPTAGLHFSRELIKRLEIKGVKFAEVTLHTGLGTFRPIEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M +E ID + +N K ++ ++GTT++R +E++ T ++ G+TN F
Sbjct: 229 KHKMDAEYFNIDEYAVKVVNKAKEENRKVCAIGTTTVRAVESSVTAQNLLKAAEGWTNTF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + L++NFHLPK++LL++V AF G + + YQ AI YRF+SYGD L+
Sbjct: 289 IHPPYDFAIPNALVTNFHLPKTSLLIMVCAFAGYDLVMEAYQQAIKEKYRFFSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|312897342|ref|ZP_07756768.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Megasphaera
micronuciformis F0359]
gi|310621560|gb|EFQ05094.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Megasphaera
micronuciformis F0359]
Length = 341
Score = 451 bits (1161), Expect = e-125, Method: Composition-based stats.
Identities = 148/356 (41%), Positives = 203/356 (57%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +F ++LP IA P PRD+ARLM+ + + L L+ D +V
Sbjct: 3 LKLSDFSYELPQELIAQHPAEPRDTARLMLYDKKTGET---ENKIFRQLTDELHQGDVLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN++KVI A+L+G R ++ L V + W V +P K G L F
Sbjct: 60 FNDSKVIPARLHGTRV----PTGGKVEVLLLTPVGEDRWEVLVKPGKKALPGSTLSFGE- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
RL V D+ + G ++ F+ G+ + I +G +PLPPYI +K + DY
Sbjct: 115 ----RLTGVVEDRTDYGGRVIHFTYDGV-FDHIIEEIGEMPLPPYIHKK----PENPDDY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +GS AAPTAGLHFT LL ++ G++ FVTLHVG GTF PV+ E+ +DH+M
Sbjct: 166 QTVYAREKGSAAAPTAGLHFTDELLEKIRDKGVETVFVTLHVGLGTFRPVEEENIEDHVM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I A A+N K G RIV+VGTTS+R LE+A E G + +G TNIFI PG
Sbjct: 226 HSEYYSITPEAAAAVNRAKEEGRRIVAVGTTSVRTLESAA-EKGRLKAGAGKTNIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y FR VD L++NFHLP+STLLML+SA E K Y+ A+ YRF+S+GD +
Sbjct: 285 YTFRIVDALVTNFHLPESTLLMLISALSDREHILKAYETAVREKYRFFSFGDAMFI 340
>gi|90419655|ref|ZP_01227565.1| S-adenosylmethionine, tRNA ribosyltransferase-isomerase
[Aurantimonas manganoxydans SI85-9A1]
gi|90336592|gb|EAS50333.1| S-adenosylmethionine, tRNA ribosyltransferase-isomerase
[Aurantimonas manganoxydans SI85-9A1]
Length = 363
Score = 451 bits (1161), Expect = e-125, Method: Composition-based stats.
Identities = 203/364 (55%), Positives = 245/364 (67%), Gaps = 10/364 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LPP RIALRPV PR+SARL+ V P ++D V DLP+ L D +V
Sbjct: 1 MRVDLFDFELPPERIALRPVSPRESARLLCVDPARG----LADQTVGDLPSLLTPGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHI---NRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
FN+TKVI AQL G+R +IS TLHMR +P+ W + RP K +K GD + F
Sbjct: 57 FNDTKVIPAQLEGLRRRPGSVDGEGVAQISATLHMREAPDRWLAFVRPGKRVKVGDRIAF 116
Query: 118 FSQDGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
LEATV + GE L F +SG L+ I+ VG IPLPPYIA KRP D+
Sbjct: 117 GHGGNACLAGTLEATVETRGEGGEASLRFDLSGPALDEAIAAVGHIPLPPYIASKRPDDS 176
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
+D DYQT YA+ G+VAAPTAGLHFT +L +RL + I ++TLHVGAGTF+PVK ED
Sbjct: 177 QDRSDYQTVYAREDGAVAAPTAGLHFTPDLFARLAARDIAAEYLTLHVGAGTFLPVKAED 236
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
T DH MHSEIG + +A+ LN+ + G RIVSVGTTSLRLLE+A DG I P+SG T+
Sbjct: 237 TADHRMHSEIGRVTEESAERLNAARREGRRIVSVGTTSLRLLESAADADGTIRPFSGPTD 296
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFITPGYRFRAVD LM+NFHLP+STL MLVSAF GI+ K Y HAI + YRFYSYGD
Sbjct: 297 IFITPGYRFRAVDRLMTNFHLPRSTLFMLVSAFSGIDTMKSAYAHAIGNEYRFYSYGDAC 356
Query: 355 LLFQ 358
LL +
Sbjct: 357 LLDR 360
>gi|153001324|ref|YP_001367005.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
baltica OS185]
gi|160875993|ref|YP_001555309.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
baltica OS195]
gi|217972746|ref|YP_002357497.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
baltica OS223]
gi|304411825|ref|ZP_07393436.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Shewanella
baltica OS183]
gi|307303407|ref|ZP_07583162.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Shewanella
baltica BA175]
gi|166216752|sp|A6WQ53|QUEA_SHEB8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|189038878|sp|A9KUN1|QUEA_SHEB9 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|254764287|sp|B8EDJ6|QUEA_SHEB2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|151365942|gb|ABS08942.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Shewanella
baltica OS185]
gi|160861515|gb|ABX50049.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Shewanella
baltica OS195]
gi|217497881|gb|ACK46074.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Shewanella
baltica OS223]
gi|304349685|gb|EFM14092.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Shewanella
baltica OS183]
gi|306913767|gb|EFN44189.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Shewanella
baltica BA175]
gi|315268189|gb|ADT95042.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Shewanella
baltica OS678]
Length = 345
Score = 451 bits (1161), Expect = e-125, Method: Composition-based stats.
Identities = 138/360 (38%), Positives = 206/360 (57%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R+++RL+ + N + D +DL +N D +V
Sbjct: 1 MRVADFSFDLPDELIARYPMAQRNASRLLTLDGNSGA---LGDKQFTDLLGMINPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + + R SK K ++
Sbjct: 58 FNNTRVIPARMFGQKAS-----GGKLEILVERMLDDKRILAHVRSSKSPKVDSLILL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DG +++ ++ + +T + + +S + + + VG +PLPPYI RP + D Y
Sbjct: 110 DGGYQMK--MVARHDT--LFELELLSELTILEVLEAVGHMPLPPYI--DRPDEDADKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF +L L + G+ + FVTLHVGAGTF PV+V+ +H M
Sbjct: 164 QTVYNQNPGAVAAPTAGLHFDDAMLDALKAKGVNIAFVTLHVGAGTFQPVRVDTILEHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFITP 299
HSE + + K+ G R+V+VGTTS+R LE+A G + +SG T+IFI P
Sbjct: 224 HSEWANVPQDVVDLIAQTKAAGKRVVAVGTTSVRSLESAARASQGELKAFSGDTDIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY+F+ VD +++NFHLP+STL+MLVSAF G + YQHAI+ YRF+SYGD + +K
Sbjct: 284 GYQFQVVDAMVTNFHLPESTLIMLVSAFAGFDHVMAAYQHAIAQKYRFFSYGDAMFVTKK 343
>gi|209695860|ref|YP_002263790.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Aliivibrio
salmonicida LFI1238]
gi|226713833|sp|B6EK66|QUEA_ALISL RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|208009813|emb|CAQ80120.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Aliivibrio
salmonicida LFI1238]
Length = 350
Score = 451 bits (1161), Expect = e-125, Method: Composition-based stats.
Identities = 139/363 (38%), Positives = 209/363 (57%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ ++ N + D +D+ + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPQPERTASRLLHLNGNSG---ELHDGQFTDVLDLVQHGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ GV+ ++ + + +S + R SK K G+ L
Sbjct: 58 FNNTRVIPARMFGVKAS-----GGKLEVLVERVLDDHSVLAHVRCSKSPKPGNQLWLGE- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
EA ++ + +T + + S ++ + +G +PLPPYI RP + D Y
Sbjct: 112 --NQEYEAEMVARHDT--LFEIRFTSEKKVLDILDEIGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF +++L ++ + G++ +VTLHVGAGTF PV+V++ DH M
Sbjct: 166 QTVYNEKPGAVAAPTAGLHFDTDILEKMKAKGVEFAYVTLHVGAGTFQPVRVDNILDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDG----IINPWSGFTNIF 296
HSE + A+ + K+RGGR++SVGTTS+R LE+A + P+ T IF
Sbjct: 226 HSEYAEVSQEVVDAIKATKARGGRVISVGTTSVRSLESAAQHALKQGTELAPFFDDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY F+ VD L++NFHLP+STL+MLVSAF G + T K Y A++H YRF+SYGD +
Sbjct: 286 IYPGYEFQVVDALVTNFHLPESTLIMLVSAFAGYDNTMKAYDQAVNHQYRFFSYGDAMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 TKK 348
>gi|294140344|ref|YP_003556322.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
violacea DSS12]
gi|293326813|dbj|BAJ01544.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
violacea DSS12]
Length = 345
Score = 451 bits (1160), Expect = e-125, Method: Composition-based stats.
Identities = 138/360 (38%), Positives = 201/360 (55%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R S+RL+ + N ++D +D+ +N D +V
Sbjct: 1 MRVTDFSFELPNELIARYPTPERTSSRLLSLEGNTG---QVTDKQFTDILNMVNPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + + ++ + + S + R SK K I+
Sbjct: 58 FNNTRVIPARLFGKK-----QTGGKLELLVERILDDKSILAHVRCSKSPKVDSIVCL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
E ++ + + + + +S + + VG +PLPPYI RP + D Y
Sbjct: 110 --DGGYEMIMLARHDA--LFELKLVSDKTILEVLEEVGHMPLPPYI--DRPDEDADKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y K G+VAAPTAGLHF +L L G+ FVTLHVGAGTF PVKV++ +H M
Sbjct: 164 QTVYNKTPGAVAAPTAGLHFDDAILQALADKGVDTAFVTLHVGAGTFQPVKVDNILEHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFITP 299
HSE + + K+ G R+++VGTTS+R LE+A +G + + T+IFI P
Sbjct: 224 HSEWAEVSQDVVDKVIQTKANGKRVIAVGTTSVRSLESAAKASEGALEAFCSDTDIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY+F+ VD +++NFHLP+STL+ML+SAF G +E K YQHAI+ YRF+SYGD + +K
Sbjct: 284 GYKFQVVDAMVTNFHLPESTLIMLLSAFAGFDEVKNAYQHAIAQKYRFFSYGDAMFVTKK 343
>gi|330719270|ref|ZP_08313870.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Leuconostoc
fallax KCTC 3537]
Length = 352
Score = 451 bits (1160), Expect = e-125, Method: Composition-based stats.
Identities = 140/358 (39%), Positives = 206/358 (57%), Gaps = 13/358 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FD+DLP + IA P+ RD++RL+ ++ D D+ ++ + DAIV
Sbjct: 7 TLSDFDYDLPEALIAQTPLKQRDASRLLALNAISG---EYEDRHFYDILDYVKAGDAIVM 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NN++V+ A+L+G R L + + W V +P+K G + F
Sbjct: 64 NNSRVLPARLHGAR----PETGGHAEVLLLRQDHGDVWEVLMKPAKKSPIGSEVVFGDDM 119
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ ATV++ G ++ F GI + +G +PLPPYI K D YQ
Sbjct: 120 QHPIMTATVLEDLEHGGKMIEFHYDGI-FMELLDKLGEMPLPPYIKEKLA----DQERYQ 174
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T Y+K+ GS AAPTAGLH+T LL ++ + G+K +TLHVG GTF PV+ E+ +DH MH
Sbjct: 175 TVYSKVDGSAAAPTAGLHWTPELLDKVRAKGVKTVELTLHVGLGTFRPVEEENIEDHKMH 234
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPG 300
SE + A AQ LN V+ GGRI++ GTTS+R LET ++ G + SG+T+IFI PG
Sbjct: 235 SEFYQLTADAAQDLNEVRQNGGRIIATGTTSIRTLETIGSKFSGELKADSGWTDIFIKPG 294
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y++ VD ++NFHLPKSTL+MLV+AF G E Y HA++ YRF+S+GD +++
Sbjct: 295 YQWTVVDAFITNFHLPKSTLVMLVAAFTGREHIMNAYHHAVAQQYRFFSFGDAMFIYK 352
>gi|261212160|ref|ZP_05926446.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio sp.
RC341]
gi|260838768|gb|EEX65419.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio sp.
RC341]
Length = 352
Score = 451 bits (1160), Expect = e-125, Method: Composition-based stats.
Identities = 132/363 (36%), Positives = 204/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N ++D D+ + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPKAERTASRLLQLDGNSG---QLTDGTFKDVLGLVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + ++ + R SK K G L+
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D A + + + + + + + ++ +G +PLPPYI RP + D Y
Sbjct: 113 D---EFHAVMQARHDA--LFEIRFTAETVVLDILNQIGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G+++ +VTLHVGAGTF PV+V++ DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDQALLEQIQAKGVELAYVTLHVGAGTFQPVRVDNIHDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + A+ + K+RGGR+++VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAVAATKARGGRVIAVGTTSVRSLESAAQDALKKGTELKPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY++ VD L++NFHLP+STL+MLVSAF G T Y+HA+ YRF+SYGD +
Sbjct: 286 IFPGYQYLLVDCLITNFHLPESTLIMLVSAFAGYGHTMAAYEHAVKEQYRFFSYGDAMFI 345
Query: 357 FQK 359
++
Sbjct: 346 RKQ 348
>gi|163852486|ref|YP_001640529.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Methylobacterium extorquens PA1]
gi|226713844|sp|A9VX03|QUEA_METEP RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|163664091|gb|ABY31458.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Methylobacterium extorquens PA1]
Length = 368
Score = 451 bits (1160), Expect = e-125, Method: Composition-based stats.
Identities = 196/364 (53%), Positives = 256/364 (70%), Gaps = 10/364 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP + IALRP PRD++RL+VV P ++D V DLPA L+ DA+V
Sbjct: 1 MRVDLFDFELPEAAIALRPASPRDASRLLVVRPG----DPLADRGVRDLPALLSPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L+G+R + LH+R +P+ W +ARP+K + GD + F S+
Sbjct: 57 FNDTRVIPARLSGIRHRAGG-SGQRCEAMLHLREAPDRWRAFARPAKRLAPGDRIRFGSE 115
Query: 121 DGQ-----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
S L+ATV ++ GEILL F +SG L+ I+ +G +PLPPYIA KRP DA+
Sbjct: 116 GASEVCALSGLDATVEERGEGGEILLRFDLSGPALDEAIAGLGALPLPPYIAGKRPTDAQ 175
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D DYQT YA+ G+VAAPTAGLHF+ LL+ + + GI+ VTLHVGAGTF+PVK +DT
Sbjct: 176 DTTDYQTVYAREPGAVAAPTAGLHFSDALLAGIDAAGIERVHVTLHVGAGTFLPVKADDT 235
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+ H MH+EIG +DA TA LN+V++RG R+V+VGTT+LRLLE+A DG I P+SG T+I
Sbjct: 236 EAHRMHAEIGILDAATAARLNAVRARGNRVVAVGTTALRLLESAADPDGTIRPFSGATDI 295
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFRAVD L++NFHLP+STL MLVSAF G++ + Y HAI YRFYSYGD SL
Sbjct: 296 FITPGYRFRAVDALVTNFHLPRSTLFMLVSAFAGLDTMRAAYAHAIQSGYRFYSYGDASL 355
Query: 356 LFQK 359
LF +
Sbjct: 356 LFPE 359
>gi|330504700|ref|YP_004381569.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
mendocina NK-01]
gi|328918986|gb|AEB59817.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
mendocina NK-01]
Length = 347
Score = 451 bits (1160), Expect = e-125, Method: Composition-based stats.
Identities = 146/358 (40%), Positives = 203/358 (56%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP S IA P+ R ++RL+ + + +D+ L D +V
Sbjct: 1 MRVADFHFDLPESLIARHPLAERRASRLLQLDGPSGA---LRHGQFTDVLEQLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDQHRVLAHVRSSKSPKPGSQILI--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ EA ++ + N L + L + VG +PLPPYI RP + D Y
Sbjct: 110 --EGGGEAEMVARHNA---LFELRFAEPVL-ALLERVGHMPLPPYI--DRPDEEADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL+ + + G++ FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAEKAGAVAAPTAGLHFDDELLAAIRAKGVETAFVTLHVGAGTFQPVRVERIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + ++RGGR+V+VGTTS+R LETA DG + P+SG T+IFI PG
Sbjct: 222 HSEWLEVSQDVVDAVAACRARGGRVVAVGTTSVRSLETAAR-DGELKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y+ A++ YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYSETMAAYREAVAQGYRFFSYGDAMFITR 338
>gi|152978729|ref|YP_001344358.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus succinogenes 130Z]
gi|150840452|gb|ABR74423.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Actinobacillus succinogenes 130Z]
Length = 380
Score = 451 bits (1160), Expect = e-125, Method: Composition-based stats.
Identities = 140/366 (38%), Positives = 199/366 (54%), Gaps = 17/366 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +F FDLP IA P R S+RL+ ++ I SD+ +N D +V
Sbjct: 22 MLVSDFHFDLPDELIARYPKPERTSSRLLQLNGENG---EIFHRTFSDVYGLINEGDLLV 78
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ ++ S+ + R SK K G L
Sbjct: 79 FNNTRVIPARMYGRKIS-----GGKVEVLAERILTETSFLAHVRSSKAPKAGAELILGED 133
Query: 121 DGQSRLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ G + L S L + +G +PLPPYI RP + D
Sbjct: 134 KLGEGNGVRMKMLGRQGALFELEISEKPTALLDVLQKIGHMPLPPYI--DRPDEEADQER 191
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y K+ G+VAAPTAGLHF LL++L + G+ FVTLHVGAGTF PV+V+ +DH
Sbjct: 192 YQTVYNKVPGAVAAPTAGLHFDDELLAKLKAKGVNFAFVTLHVGAGTFQPVRVDKIEDHH 251
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT------TEDGIINPWSGFT 293
MH+E + A+ + K+ G R+++VGTTS+R LE+A +I P+ T
Sbjct: 252 MHAEYAEVPQEVVNAVLATKAAGKRVIAVGTTSVRSLESAALAAEEKGSSQLIEPFFSDT 311
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + + Y+ A+ + YRF+SYGD
Sbjct: 312 SIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNIMQAYKSAVENRYRFFSYGDA 371
Query: 354 SLLFQK 359
L +K
Sbjct: 372 MFLTKK 377
>gi|258619938|ref|ZP_05714978.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase [Vibrio
mimicus VM573]
gi|258587671|gb|EEW12380.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase [Vibrio
mimicus VM573]
Length = 352
Score = 451 bits (1160), Expect = e-125, Method: Composition-based stats.
Identities = 133/363 (36%), Positives = 204/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N + D D+ + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPKAERTASRLLQLDGNSG---QLVDGTFKDVLGLVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + ++ + R SK K G L+
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D A + + + + + + + ++ +G +PLPPYI RP + D Y
Sbjct: 113 D---EFHAVMQARHDA--LFEIRFTAETVVLDILNQIGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G+++ +VTLHVGAGTF PV+VE+ DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDQVLLEQIQAKGVELAYVTLHVGAGTFQPVRVENIHDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
H+E + A+ + K+RGGR+++VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAVAATKARGGRVIAVGTTSVRSLESAAQDALKKGTELKPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+++ VD L++NFHLP+STL+MLVSAF G T Y+HA+ YRF+SYGD +
Sbjct: 286 IFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYGHTMAAYEHAVQQQYRFFSYGDAMFI 345
Query: 357 FQK 359
++
Sbjct: 346 RKQ 348
>gi|148546106|ref|YP_001266208.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
putida F1]
gi|166216741|sp|A5VYR4|QUEA_PSEP1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|148510164|gb|ABQ77024.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Pseudomonas putida F1]
gi|313497201|gb|ADR58567.1| QueA [Pseudomonas putida BIRD-1]
Length = 349
Score = 451 bits (1160), Expect = e-125, Method: Composition-based stats.
Identities = 143/358 (39%), Positives = 202/358 (56%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R +RL+V+ ++ DL +L D +V
Sbjct: 1 MRVADFSFELPDSLIARHPLAERHGSRLLVLDGPTGA---LAHRQFPDLLDYLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G ++
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEVLVERVLDSHRVLAHVRASKAPKVGAVILI--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
EA ++ + +T L E+ + VG +PLPPYI RP + D Y
Sbjct: 110 --DGGGEAEMVARHDTLFELRFTE----EVLPLLDRVGHMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL ++ G++ FVTLHVGAGTF PV+V+ +DH M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDEALLEKIADKGVERAFVTLHVGAGTFQPVRVDKIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A+ + ++RGGR+++VGTTS+R LE+A DG++ +SG T+IFI PG
Sbjct: 222 HKEWLEVGQDVVDAIEACRARGGRVIAVGTTSVRSLESAAR-DGVLKAFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y A+ H YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAVEHGYRFFSYGDAMFITR 338
>gi|319400966|gb|EFV89185.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus epidermidis FRI909]
Length = 341
Score = 451 bits (1160), Expect = e-124, Method: Composition-based stats.
Identities = 142/357 (39%), Positives = 208/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++FD+ LP S IA P+ RD +RL+V+ + ++ D+ + D +V
Sbjct: 1 MNIEDFDYHLPESLIAQTPLKNRDQSRLLVLRKDTG---EMTHLHFRDVIHYFEPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + ++ N W V +P+K IKKG L+F
Sbjct: 58 LNDTRVMPARLFGLK----EETGAKVEMLMLTQIEGNDWEVLLKPAKRIKKGHHLNF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++ A I++ G ++ GI L+ ++ +G +PLPPYI + D Y
Sbjct: 111 -GDGKIVAECIEELKQGGRIMRLHYEGI-LQERLDELGEMPLPPYIKERLD----DPDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT +LL+++ G+ + F+TLHVG GTF PV V++ DDH M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTDDLLNKIEQKGVHIAFITLHVGLGTFRPVSVDNIDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN K G R++SVGTTS R LET + SG+T+IFI PG
Sbjct: 225 HSEYYQMTQKTADLLNQTKENGKRVISVGTTSTRTLETIRRDHPQFVATSGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+A+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD L+
Sbjct: 285 FEFKAIDGLITNFHLPKSTLVMLVSAFSSKKYILNAYHKAVEMEYRFFSFGDAMLII 341
>gi|229844948|ref|ZP_04465085.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae 6P18H1]
gi|229812082|gb|EEP47774.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae 6P18H1]
Length = 363
Score = 451 bits (1160), Expect = e-124, Method: Composition-based stats.
Identities = 137/365 (37%), Positives = 202/365 (55%), Gaps = 17/365 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R S RL+ ++ I SD+ ++ D ++
Sbjct: 1 MRVSDFNFDLPDELIARYPKTDRVSCRLLQLNGENG---EIFHRTFSDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARMFGGKAS-----GGKIEVLVERMLDEHRFLAHIRSSKSPKEGAELFLGED 112
Query: 121 D-GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G++ V+ ++ + S L + +G +PLPPYI RP + D
Sbjct: 113 KLGENNGIKAVMKARHSSLFEVELSDKSTALLDVLQTIGHMPLPPYI--DRPDEEADKEC 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y+K+ G+VAAPTAGLHF LL +L G+ FVTLHVGAGTF PV+VE+ +DH+
Sbjct: 171 YQTVYSKVPGAVAAPTAGLHFDDPLLEKLKKKGVNFEFVTLHVGAGTFQPVRVENIEDHV 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT------TEDGIINPWSGFT 293
MH+E + A+ + K G R+++VGTTS+R +E+A +I P+ T
Sbjct: 231 MHAEYVEVSQEVCNAIIATKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSDT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + T Y+ A+ + YRF+SYGD
Sbjct: 291 SIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKSAVENHYRFFSYGDA 350
Query: 354 SLLFQ 358
+ +
Sbjct: 351 MFITK 355
>gi|311280707|ref|YP_003942938.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Enterobacter cloacae SCF1]
gi|308749902|gb|ADO49654.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Enterobacter cloacae SCF1]
Length = 356
Score = 451 bits (1160), Expect = e-124, Method: Composition-based stats.
Identities = 141/359 (39%), Positives = 201/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVADFSFELPESLIAHYPQPERSSCRLLSLDGPTGT---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + + + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SINATMTARHDA--LFEVEFNDERPVLDILNAIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L GI++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSQKPGAVAAPTAGLHFDEPLLAALREKGIEMAFVTLHVGAGTFQPVRVDSIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A + I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVMAAKARGSRVIAVGTTSVRSLESAAQAAKKERIEPFFGDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGYQYQIIDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEQNYRFFSYGDAMFIT 344
>gi|325955528|ref|YP_004239188.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Weeksella
virosa DSM 16922]
gi|323438146|gb|ADX68610.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Weeksella
virosa DSM 16922]
Length = 351
Score = 451 bits (1160), Expect = e-124, Method: Composition-based stats.
Identities = 147/361 (40%), Positives = 199/361 (55%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP +A RP RD ARLMV+H + I L DL + + D ++
Sbjct: 3 MKTSDFDFKLPDELLAERPSEHRDEARLMVIHRDTGK---IEHRLFKDLIEYFDEGDVMI 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + +I L + P + W V P++ I+ G+ L F
Sbjct: 60 RNNTKVFPARLMGNK----EKTGAKIEVFLLRELDPETRLWDVLVDPARKIRIGNKLFFD 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D L A V+D + L F G E ++ +G PLP YI KR D D
Sbjct: 116 EDD---TLVAEVVDNTTSRGRTLRFLFDGSYEEFRIKLKEIGDTPLPKYI--KRDADEED 170
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ +LL RL G+ VTLH+G GTFMPV+VED
Sbjct: 171 AERYQTIYAKEEGAVAAPTAGLHFSKHLLKRLEIKGVDFAEVTLHIGLGTFMPVEVEDLS 230
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I +A +N R+ ++GTTS+R +E++ + DG +N ++G+TN F
Sbjct: 231 KHKMESEQVIIPQESADLVNKAIDAKKRVCAIGTTSMRSIESSVSADGHLNAFNGWTNKF 290
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH PKSTLLM++SAF G E K Y AI Y+FYSYGD L+
Sbjct: 291 IYPPYDFSIANCMVTNFHTPKSTLLMMISAFAGHELIMKAYDEAIKEGYKFYSYGDAMLI 350
Query: 357 F 357
Sbjct: 351 L 351
>gi|68248853|ref|YP_247965.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae 86-028NP]
gi|81336732|sp|Q4QNU2|QUEA_HAEI8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|68057052|gb|AAX87305.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae 86-028NP]
Length = 363
Score = 450 bits (1159), Expect = e-124, Method: Composition-based stats.
Identities = 139/365 (38%), Positives = 203/365 (55%), Gaps = 17/365 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R S RL+ ++ I SD+ ++ D ++
Sbjct: 1 MRVSDFNFDLPDELIARYPKTDRVSCRLLQLNGENG---EIFHRTFSDVLDLIDQGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT VI A++ G + +I + + + + + R SK K+G L
Sbjct: 58 FNNTHVIPARMFGRKAS-----GGKIEVLVERMLDEHRFLAHIRSSKSPKEGAELFLGED 112
Query: 121 D-GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G++ V+ ++ + S L + +G +PLPPYI RP + D
Sbjct: 113 KLGENNGIKAVMKARHSSLFEVELSDKSTALLDVLQTIGHMPLPPYI--DRPDEEADKEC 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y+K+ G+VAAPTAGLHF NLL +L + G+ FVTLHVGAGTF PV+VE+ +DH+
Sbjct: 171 YQTVYSKVPGAVAAPTAGLHFDKNLLEKLKAKGVNFEFVTLHVGAGTFQPVRVENIEDHV 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT------TEDGIINPWSGFT 293
MH+E + A+ + K G R+++VGTTS+R +E+A +I P+ T
Sbjct: 231 MHAEYVEVSQEVCNAIIATKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSDT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + T Y+HA+ YRF+SYGD
Sbjct: 291 SIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKHAVQEKYRFFSYGDA 350
Query: 354 SLLFQ 358
+ +
Sbjct: 351 MFINK 355
>gi|311694369|gb|ADP97242.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [marine
bacterium HP15]
Length = 367
Score = 450 bits (1159), Expect = e-124, Method: Composition-based stats.
Identities = 141/360 (39%), Positives = 205/360 (56%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R ++RL+ + + + S+LP L D +V
Sbjct: 1 MNVSDFHFDLPDELIARYPLKDRSASRLLCLDGLSGK---LDHRIFSELPDLLQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + R SK +K+G + +
Sbjct: 58 FNNTRVIPARLFGKKE-----TGGQVEVLVERVTGEPDIIAHVRASKALKQGQKVIL--E 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DG S A + + S + + +G +PLPPY+ RP ++ D Y
Sbjct: 111 DGTSLRMA-----GRDEALFHLVCESEEPVLEVLERIGHMPLPPYV--DRPDESTDRERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF +LL +L + GI+ FVTLHVGAGTF PV+V+ +DH M
Sbjct: 164 QTVYAREAGAVAAPTAGLHFDESLLEKLAACGIESAFVTLHVGAGTFQPVRVDKIEDHTM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE+ + A+ ++RGGR+V+VGTTS+R LE+A+ G + ++G T+IFI PG
Sbjct: 224 HSEVVNVPQDAVDAIERTRARGGRVVAVGTTSVRSLESASR-GGRLRAFTGETDIFIYPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRF+ VD L++NFHLP+STL+MLVSAF G + Y+ A+ YRF+SYGD + +
Sbjct: 283 YRFQTVDALITNFHLPESTLIMLVSAFAGYDNVMSAYREAVKERYRFFSYGDAMFINGQE 342
>gi|327402924|ref|YP_004343762.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Fluviicola
taffensis DSM 16823]
gi|327318432|gb|AEA42924.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Fluviicola
taffensis DSM 16823]
Length = 352
Score = 450 bits (1159), Expect = e-124, Method: Composition-based stats.
Identities = 146/361 (40%), Positives = 197/361 (54%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EF FDLP IA P RD ARLMV+H I L D+ + D ++
Sbjct: 4 MKLSEFSFDLPDELIAEYPSEHRDEARLMVIHRETGK---IEHRLFKDIINYFGEGDVMI 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
NNT+V A++ G + + +I L ++ S W V P++ I+ G+ L+F
Sbjct: 61 MNNTRVFPARMYGNK----EKTGAKIEVFLLRELNRESLLWDVLVDPARKIRIGNKLYFG 116
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDARD 176
D L A VID + L F G E + +I+ +G PLP YI KR ++ D
Sbjct: 117 DDD---SLVAEVIDNTTSRGRTLRFLFDGPYEEFKAKITELGETPLPKYI--KREVEETD 171
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ LL RL GI VTLHVG GTF V+VED
Sbjct: 172 EERYQTIYAKEEGAVAAPTAGLHFSRELLKRLELKGINFAEVTLHVGLGTFRSVEVEDLT 231
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I A+ +N K R+ ++GTTS+R +ET+ + D ++ + G+TN F
Sbjct: 232 KHKMDSEQVIITDKAARIVNEAKKNKKRVCAIGTTSMRAVETSVSTDNMLKAFDGWTNKF 291
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F D L++NFH P STLLM++SAFCG + + Y AI Y+FYSYGD L+
Sbjct: 292 IFPPYDFSIADSLVTNFHTPLSTLLMMISAFCGHDLMMEAYHEAIKEKYKFYSYGDAMLI 351
Query: 357 F 357
Sbjct: 352 L 352
>gi|113461459|ref|YP_719528.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
somnus 129PT]
gi|170718434|ref|YP_001783652.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
somnus 2336]
gi|123132213|sp|Q0I4R7|QUEA_HAES1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|189038526|sp|B0UWJ9|QUEA_HAES2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|112823502|gb|ABI25591.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
somnus 129PT]
gi|168826563|gb|ACA31934.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Haemophilus somnus 2336]
Length = 356
Score = 450 bits (1159), Expect = e-124, Method: Composition-based stats.
Identities = 132/365 (36%), Positives = 204/365 (55%), Gaps = 17/365 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F FDLP IA P R S+R++ ++ + SD+ +N D ++
Sbjct: 1 MYLSDFYFDLPDELIARYPKRERSSSRMLQLNGQNG---ELFHRTFSDVADLINEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + ++ + + + R SK K+ +L
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKIEVLVERVLNEHHFLAHIRSSKSPKENTVLFLGED 112
Query: 121 D-GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G+ + ++ + L S L + +G +PLPPYI RP + D
Sbjct: 113 KLGEGKGVEMLMKARHENLFELELSDKSTALLDILQKIGHMPLPPYI--DRPDEDADKER 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y K+ G+VAAPTAGLHF LL++L + G+ FVTLHVGAGTF PV+VE+ +DH
Sbjct: 171 YQTVYNKVPGAVAAPTAGLHFDDELLTQLKNKGVNFAFVTLHVGAGTFQPVRVENIEDHK 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT------TEDGIINPWSGFT 293
MH+E + A+ + K++G R+++VGTTS+R +E+A ++ P+ T
Sbjct: 231 MHAEYVEVPQEVVDAVLATKAKGKRVIAVGTTSVRSIESAALFAEENNSTHLLEPYFSDT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG +FR +D L++NFHLP+STL+MLVSAF G + T Y+ A+ + YRF+SYGD
Sbjct: 291 SIFIYPGKKFRVIDCLITNFHLPESTLIMLVSAFAGYQHTMNAYKSAVENRYRFFSYGDA 350
Query: 354 SLLFQ 358
+ +
Sbjct: 351 MFITK 355
>gi|120598341|ref|YP_962915.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
sp. W3-18-1]
gi|166217772|sp|A1RI66|QUEA_SHESW RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|120558434|gb|ABM24361.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Shewanella
sp. W3-18-1]
Length = 345
Score = 450 bits (1159), Expect = e-124, Method: Composition-based stats.
Identities = 139/360 (38%), Positives = 207/360 (57%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R+++RL+ + N + D +DL +N D +V
Sbjct: 1 MRVADFSFDLPDELIARYPMAQRNASRLLTLDGNSGA---LGDKQFTDLLEMINPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + + R SK K ++H
Sbjct: 58 FNNTRVIPARMFGQKAS-----GGKLEILVERMLDDKRILAHVRSSKSPKVDSLIHL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DG +++ ++ + +T + + +S + + + VG +PLPPYI RP + D Y
Sbjct: 110 DGGYQMK--MVARHDT--LFELELLSELTILEVLEAVGHMPLPPYI--DRPDEDADKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF +L L + G+ + FVTLHVGAGTF PV+V+ +H M
Sbjct: 164 QTVYNQNPGAVAAPTAGLHFDDAMLDALKAKGVNIAFVTLHVGAGTFQPVRVDTIVEHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFITP 299
HSE + + K+ G R+V+VGTTS+R LE+A G + +SG T+IFI P
Sbjct: 224 HSEWANVPQDVVDLIAQTKAAGKRVVAVGTTSVRSLESAARASLGELKAFSGDTDIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY+F+ VD +++NFHLP+STL+MLVSAF G + YQHAI+ YRF+SYGD + +K
Sbjct: 284 GYQFQVVDAMVTNFHLPESTLIMLVSAFAGFDHVMAAYQHAITQKYRFFSYGDAMFVTKK 343
>gi|260582870|ref|ZP_05850655.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae NT127]
gi|260094083|gb|EEW77986.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae NT127]
Length = 363
Score = 450 bits (1159), Expect = e-124, Method: Composition-based stats.
Identities = 139/365 (38%), Positives = 203/365 (55%), Gaps = 17/365 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R S RL+ ++ I SD+ ++ D ++
Sbjct: 1 MRVSDFNFDLPDELIARYPKTDRVSCRLLQLNGENG---EIFHRTFSDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT VI A++ G + +I + + + + + R SK K+G L
Sbjct: 58 FNNTHVIPARMFGRKAS-----GGKIEVLVERMLDEHRFLAHIRSSKSPKEGAELFLGED 112
Query: 121 D-GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G++ V+ ++ + S L + +G +PLPPYI RP + D
Sbjct: 113 KLGENNGIKAVMTARHSSLFEVELSDKSTALLDVLQTIGHMPLPPYI--DRPDEEADKEC 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y+K+ G+VAAPTAGLHF NLL +L + G+ FVTLHVGAGTF PV+VE+ +DH+
Sbjct: 171 YQTVYSKVPGAVAAPTAGLHFDENLLEKLKAKGVNFEFVTLHVGAGTFQPVRVENIEDHV 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT------TEDGIINPWSGFT 293
MH+E + A+ + K G R+++VGTTS+R +E+A +I P+ T
Sbjct: 231 MHAEYVEVSQEVCNAIIATKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSDT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + T Y+HA+ YRF+SYGD
Sbjct: 291 SIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKHAVQEKYRFFSYGDA 350
Query: 354 SLLFQ 358
+ +
Sbjct: 351 MFINK 355
>gi|302874955|ref|YP_003843588.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Clostridium
cellulovorans 743B]
gi|307690427|ref|ZP_07632873.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
cellulovorans 743B]
gi|302577812|gb|ADL51824.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Clostridium
cellulovorans 743B]
Length = 341
Score = 450 bits (1159), Expect = e-124, Method: Composition-based stats.
Identities = 141/356 (39%), Positives = 200/356 (56%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M VK++ +DLP IA P RD + + D+ L++ D +V
Sbjct: 1 MDVKDYYYDLPEELIAQHPSEERDLC---RLLLLDKISGETEHKIFKDIIDELHTGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + ++ L R+ ++W +P K K G F
Sbjct: 58 LNDTRVLPARLIGEK----EDTHGKMEFLLLKRIEKDTWQALVKPGKRAKIGSRFSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A V+D + G ++ F GI E + +G +PLPPYI K D Y
Sbjct: 111 -GDGILKAEVVDISDEGSRIIKFFYDGI-FEEVLDSLGEMPLPPYITEKLD----DKEKY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT LLS++ + GIK+ ++TLHVG GTF PVKV+ ++H M
Sbjct: 165 QTVYSKNNGSAAAPTAGLHFTKELLSKIEAKGIKIAYLTLHVGLGTFRPVKVDKIEEHFM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + T+ +NS K+ GGRI+ VGTTS+R LET +DG + G+T+IFI PG
Sbjct: 225 HSEYFNVSEETSNIINSTKANGGRIICVGTTSVRTLETVAEKDGKVIAKDGWTDIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+++ VD L++NFHLP+STLLMLVSA E Y+ A+ YRF+S+GD +
Sbjct: 285 YQYKVVDALITNFHLPESTLLMLVSALSSRENIINAYELAVKEQYRFFSFGDAMFI 340
>gi|332160717|ref|YP_004297294.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|318604592|emb|CBY26090.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
enterocolitica subsp. palearctica Y11]
gi|325664947|gb|ADZ41591.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|330862453|emb|CBX72610.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase [Yersinia
enterocolitica W22703]
Length = 362
Score = 450 bits (1159), Expect = e-124, Method: Composition-based stats.
Identities = 141/360 (39%), Positives = 208/360 (57%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ + +DL L D ++
Sbjct: 1 MRVADFSFELPESLIAHYPQPQRSGCRLLSLDGPTGA---LTHGIFTDLLDKLVPGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + + SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKLEVLVERVLDDHRVLAHVKASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT++ + +T + + ++ + VG +PLPPYI RP + D Y
Sbjct: 113 E---SIHATMLARHDT--LFELRFDDERDVFTILDAVGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF +L+ L GI++ FVTLHVGAGTF PV+VE +DHIM
Sbjct: 166 QTVYSQRLGAVAAPTAGLHFDEPMLAALREKGIEMAFVTLHVGAGTFQPVRVETIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+V+VGTTS+R LE+A +++G+I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLACKARGNRVVAVGTTSVRSLESAAKASDNGLIAPFFGDTKIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ VD L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD + +
Sbjct: 286 PGYHYQVVDALITNFHLPESTLIMLVSAFAGYKNTMNAYQQAVAEQYRFFSYGDAMFISR 345
>gi|218531243|ref|YP_002422059.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Methylobacterium chloromethanicum CM4]
gi|254764283|sp|B7KTS1|QUEA_METC4 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|218523546|gb|ACK84131.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylobacterium chloromethanicum CM4]
Length = 368
Score = 450 bits (1159), Expect = e-124, Method: Composition-based stats.
Identities = 197/364 (54%), Positives = 256/364 (70%), Gaps = 10/364 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP + IALRP PRD++RL+VV P ++D V DLPA L+ DA+V
Sbjct: 1 MRVDLFDFELPEAAIALRPASPRDASRLLVVRPG----DPLADRGVRDLPALLSPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L+G+R + LH+R +P+ W +ARP+K + GD + F S+
Sbjct: 57 FNDTRVIPARLSGIRHRAGG-SGQRCEAMLHLREAPDRWRAFARPAKRLAPGDRIRFGSE 115
Query: 121 DGQ-----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
S L+ATV ++ GEILL F +SG L+ I+ +G +PLPPYIA KRP DA+
Sbjct: 116 GASEVCALSGLDATVEERGEGGEILLRFDLSGPALDEAIAGLGALPLPPYIAGKRPTDAQ 175
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D DYQT YA+ G+VAAPTAGLHF+ LL+ + + GI+ VTLHVGAGTF+PVK +DT
Sbjct: 176 DTTDYQTVYAREPGAVAAPTAGLHFSDALLAGIDAAGIERVHVTLHVGAGTFLPVKADDT 235
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
D H MH+EIG +DA TA LN+V++RG R+V+VGTT+LRLLE+A DG I P+SG T+I
Sbjct: 236 DAHRMHAEIGILDAATAARLNAVRARGNRVVAVGTTALRLLESAADPDGTIRPFSGATDI 295
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFRAVD L++NFHLP+STL MLVSAF G++ + Y HAI YRFYSYGD SL
Sbjct: 296 FITPGYRFRAVDALVTNFHLPRSTLFMLVSAFAGLDTMRAAYAHAIQSGYRFYSYGDASL 355
Query: 356 LFQK 359
LF +
Sbjct: 356 LFPE 359
>gi|227358143|ref|ZP_03842484.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Proteus
mirabilis ATCC 29906]
gi|227161479|gb|EEI46516.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Proteus
mirabilis ATCC 29906]
Length = 357
Score = 450 bits (1159), Expect = e-124, Method: Composition-based stats.
Identities = 138/360 (38%), Positives = 208/360 (57%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP S IA P R RL+ + +S + +D+ LN+ D +V
Sbjct: 1 MRVSDFRFDLPESLIAHYPHPQRSGCRLLSLEGKTGN---LSHGVFTDVLDKLNAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARIYGRKAS-----GGKIEVLVERMLDEHRVLAHVRASKSPKEGASLILGED 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++AT+I + +T + + ++ ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SVQATMIARHDT--LFEIRFDDERDVLTILNSIGHMPLPPYI--DRPDERSDKELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL L + G+++ FVTLHVGAGTF PV+V++ ++H M
Sbjct: 166 QTVYNERPGAVAAPTAGLHFDEPLLEALRNKGVEMAFVTLHVGAGTFQPVRVDNIEEHTM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A +D +I P+ T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLACKARGNRVIAVGTTSVRSLESAAKAAKDALIAPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y A+ YRF+SYGD + +
Sbjct: 286 PGYQYQVIDALITNFHLPESTLIMLVSAFAGYKNTMNAYNVAVEQKYRFFSYGDAMFITR 345
>gi|157146979|ref|YP_001454298.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Citrobacter
koseri ATCC BAA-895]
gi|166216713|sp|A8AK49|QUEA_CITK8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|157084184|gb|ABV13862.1| hypothetical protein CKO_02756 [Citrobacter koseri ATCC BAA-895]
Length = 356
Score = 450 bits (1159), Expect = e-124, Method: Composition-based stats.
Identities = 143/359 (39%), Positives = 202/359 (56%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SINATMTARH--GALFEVEFNDARPVLEILNAIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L GI++ FVTLHVGAGTF PV+VE +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDDPLLAALREKGIEMAFVTLHVGAGTFQPVRVETIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG RI++VGTTS+R LE+A ++ +I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLAAKARGNRIIAVGTTSVRSLESAAQAAKNDLIEPFFGDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGYQYKVIDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEQNYRFFSYGDAMFIT 344
>gi|304391768|ref|ZP_07373710.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ahrensia
sp. R2A130]
gi|303295997|gb|EFL90355.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ahrensia
sp. R2A130]
Length = 371
Score = 450 bits (1159), Expect = e-124, Method: Composition-based stats.
Identities = 191/358 (53%), Positives = 251/358 (70%), Gaps = 8/358 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF+LP RIALRPV PRDSA+L+ ++ ++D +V++L L+ DA+V
Sbjct: 1 MKIDAFDFELPEERIALRPVNPRDSAKLLTIN--AGRDGELADRVVNELAELLSPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R E + TLHM +P++W + R +K +K G+++ F
Sbjct: 59 FNDTKVIPAQLEGIR--RREDVEARVGLTLHMEEAPDTWRAFVRGAKKLKLGELVEFGGA 116
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D A V++K + GEI+ F+ SG L ++ G IPLPPYIA KR D RD DY
Sbjct: 117 D----FTAEVLEKGDAGEIVFRFNRSGQALRDALAKRGHIPLPPYIALKRGEDERDRSDY 172
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +G+VAAPTAGLHFT L+++L + GI+ +FVTLHVGAGTF+PVKV+DTDDH+M
Sbjct: 173 QTIYARDEGAVAAPTAGLHFTDELMAKLDARGIERHFVTLHVGAGTFLPVKVDDTDDHVM 232
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE G + TA AL V+SRGG++V+VGTTSLRLLE+A E G + W G T+IFI PG
Sbjct: 233 HSERGIVTQETADALARVRSRGGKVVAVGTTSLRLLESAAQETGKVTAWQGATDIFIQPG 292
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y F AVD LM+NFHLPKSTL MLVSAF G++ ++ Y+HAI + YRFYSYGD+SLLF
Sbjct: 293 YNFLAVDALMTNFHLPKSTLFMLVSAFAGLDTMRRAYEHAIENQYRFYSYGDSSLLFP 350
>gi|104780219|ref|YP_606717.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
entomophila L48]
gi|166216739|sp|Q1IEK2|QUEA_PSEE4 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|95109206|emb|CAK13903.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein ) [Pseudomonas entomophila L48]
Length = 349
Score = 450 bits (1159), Expect = e-124, Method: Composition-based stats.
Identities = 143/358 (39%), Positives = 204/358 (56%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R +RL+V+ ++ +DL +L D +V
Sbjct: 1 MRVADFSFELPDSLIARHPLAERHGSRLLVLDGPSG---ELAHKQFTDLLEYLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K+G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEVLVERVLDSHRVLAHVRASKAPKEGAQILI--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
EA ++ + +T L S E+ + VG +PLPPYI RP + D Y
Sbjct: 110 --DGGGEAEMVARHDT---LFELRFS-EEVLPLLERVGHMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL ++ + G++ FVTLHVGAGTF PV+V+ +DH M
Sbjct: 162 QTVYAERAGAVAAPTAGLHFDEALLEKIAAKGVERAFVTLHVGAGTFQPVRVDKIEDHTM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A+ + ++RGGR+++VGTTS+R LE+A DG++ +SG T+IFI PG
Sbjct: 222 HKEWLEVSQDVVDAVAACRARGGRVIAVGTTSVRSLESAAR-DGVLKAFSGDTDIFIFPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y A+ YRF+SYGD + +
Sbjct: 281 RPFHVVDCLVTNFHLPESTLLMLVSAFAGYPETMAAYAAAVEQGYRFFSYGDAMFITR 338
>gi|260913673|ref|ZP_05920149.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pasteurella
dagmatis ATCC 43325]
gi|260632212|gb|EEX50387.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pasteurella
dagmatis ATCC 43325]
Length = 363
Score = 450 bits (1158), Expect = e-124, Method: Composition-based stats.
Identities = 138/366 (37%), Positives = 203/366 (55%), Gaps = 19/366 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R S+RL+ ++ IS +D+ +N D ++
Sbjct: 1 MRVADFHFDLPDELIARYPKTERKSSRLLQLNGENG---EISHRTFADVIDQINEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + ++ + + R SK K+G L
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKVEVLVERILTDTRFLAHVRSSKAPKEGAELWLGED 112
Query: 121 DGQSR--LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
++ T++ + +T L + L + +G +PLPPYI RP + D
Sbjct: 113 KLGENNGVKMTMVARHDT-LFELEIAEKQTALLEVLQQIGHMPLPPYI--DRPDEDADQE 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y K+ G+VAAPTAGLHF LL++L + G+ FVTLHVGAGTF PV+VE +DH
Sbjct: 170 RYQTVYNKVPGAVAAPTAGLHFDDELLAQLKAKGVNFAFVTLHVGAGTFQPVRVEHIEDH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT------TEDGIINPWSGF 292
MH+E + A+ + K G R+++VGTTS+R +E+A +I P+
Sbjct: 230 KMHAEYVEVPQEVCDAIIATKQAGKRVIAVGTTSVRSVESAALATEEKHSARLIEPYFSD 289
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFI PG FR VD L++NFHLP+STL+MLVSAF G + T + YQ A+ + YRF+SYGD
Sbjct: 290 TSIFIYPGKTFRVVDCLITNFHLPESTLIMLVSAFAGYKHTMQAYQSAVENRYRFFSYGD 349
Query: 353 TSLLFQ 358
+ +
Sbjct: 350 AMFITK 355
>gi|332038774|gb|EGI75216.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pseudoalteromonas haloplanktis ANT/505]
Length = 343
Score = 450 bits (1158), Expect = e-124, Method: Composition-based stats.
Identities = 135/360 (37%), Positives = 202/360 (56%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R S+RL+ + + + SD+ +N D +V
Sbjct: 1 MRVADFSFDLPDELIARFPKADRTSSRLLTLDGPSGT---LEHKVFSDILDLVNEGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + + + R SK +K G+ +
Sbjct: 58 FNNTRVIPARMFGQKAS-----GGKVEVLVERVLDEHRVLAHVRASKSLKVGNEVIL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + +A ++ + +T + + + ++ +G +PLPPYI RP D Y
Sbjct: 110 --EGKAKAIMVARHDT--LFELEFDHSQNVLDILNDIGHMPLPPYI--DRPDTDADRERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF L++ L G+ + FVTLHVGAGTF PV+V+ D+H+M
Sbjct: 164 QTVYGEKPGAVAAPTAGLHFDDKLMTALKDKGVNMAFVTLHVGAGTFQPVRVDSVDEHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-EDGIINPWSGFTNIFITP 299
HSE + A+ K+ GGR+++VGTTS+R LE+A G ++ + G T+IFI P
Sbjct: 224 HSEYIEVPDDVVAAVAQTKANGGRVIAVGTTSVRSLESAAKVHGGKLDTYFGDTDIFIFP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY+F VD +++NFHLP+STL+MLVSAF G + Y AI YRF+SYGD L +K
Sbjct: 284 GYQFNVVDAMVTNFHLPESTLIMLVSAFSGQDNIMGAYNTAIEQQYRFFSYGDAMFLTRK 343
>gi|329123730|ref|ZP_08252290.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
aegyptius ATCC 11116]
gi|327469929|gb|EGF15394.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
aegyptius ATCC 11116]
Length = 363
Score = 450 bits (1158), Expect = e-124, Method: Composition-based stats.
Identities = 137/365 (37%), Positives = 201/365 (55%), Gaps = 17/365 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R S RL+ ++ I SD+ ++ D ++
Sbjct: 1 MRVSDFNFDLPDELIARYPKTDRVSCRLLQLNGENG---EIFHRTFSDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKIEVLVERMLDEHRFLAHIRSSKSPKEGAELFLGED 112
Query: 121 D-GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G++ V+ ++ + S L + +G +PLP YI RP + D
Sbjct: 113 KLGENNGIKAVMKARHSSLFEVELSDKSTALLDVLQTIGHMPLPLYI--DRPDEEADKEC 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y+K+ G+VAAPTAGLHF LL +L G+ FVTLHVGAGTF PV+VE+ +DH+
Sbjct: 171 YQTVYSKVPGAVAAPTAGLHFDDPLLEKLKKKGVNFEFVTLHVGAGTFQPVRVENIEDHV 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT------TEDGIINPWSGFT 293
MH+E + A+ + K G R+++VGTTS+R +E+A +I P+ T
Sbjct: 231 MHAEYVEVSQEVCNAIIATKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSDT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + T Y+HA+ YRF+SYGD
Sbjct: 291 SIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKHAVQEKYRFFSYGDA 350
Query: 354 SLLFQ 358
+ +
Sbjct: 351 MFINK 355
>gi|261340999|ref|ZP_05968857.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterobacter cancerogenus ATCC 35316]
gi|288316863|gb|EFC55801.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterobacter cancerogenus ATCC 35316]
Length = 356
Score = 450 bits (1158), Expect = e-124, Method: Composition-based stats.
Identities = 141/359 (39%), Positives = 204/359 (56%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVADFSFELPESLIAHYPMPERSSCRLLSLDGPTG---ELTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ +AT+ + + + V + ++ +G +PLPPYI +RP + D Y
Sbjct: 113 EST---KATMTARHDA--LFEVEFNDERTVLDILNAIGHMPLPPYI--ERPDEESDRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + GI++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSQKPGAVAAPTAGLHFDEPLLEKLRAKGIEMAFVTLHVGAGTFQPVRVDSIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG +V+VGTTS+R LE+A + +I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLAAKARGSSVVAVGTTSVRSLESAAQAAKTDLIEPFFGDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGYQYKVIDALVTNFHLPESTLIMLVSAFAGYQHTMTAYKSAVEQKYRFFSYGDAMFIT 344
>gi|325272158|ref|ZP_08138589.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
sp. TJI-51]
gi|324102721|gb|EGC00137.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
sp. TJI-51]
Length = 349
Score = 450 bits (1158), Expect = e-124, Method: Composition-based stats.
Identities = 143/358 (39%), Positives = 204/358 (56%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R +RL+V+ V++ DL +L D +V
Sbjct: 1 MRVADFSFELPDSLIARHPLAERHGSRLLVLDGPSG---VLAHRQFPDLLEYLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K+G ++
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEVLVERVLDSHRVLAHVRASKAPKEGAVILI--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
EA ++ + +T L E+ + VG +PLPPYI RP + D Y
Sbjct: 110 --DGGGEAEMVARHDTLFELRFTE----EVLPLLDRVGHMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL ++ + G++ FVTLHVGAGTF PV+V+ +DH M
Sbjct: 162 QTVYAERAGAVAAPTAGLHFDEALLEKIAAKGVERAFVTLHVGAGTFQPVRVDKIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A+ + ++RGGR+++VGTTS+R LE+A DG++ +SG T+IFI PG
Sbjct: 222 HKEWLEVSQDVVDAITACRARGGRVIAVGTTSVRSLESAAR-DGVLKAFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y A+ YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAVEQGYRFFSYGDAMFITR 338
>gi|108808678|ref|YP_652594.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis Antiqua]
gi|108811060|ref|YP_646827.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis Nepal516]
gi|145600086|ref|YP_001164162.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis Pestoides F]
gi|270489477|ref|ZP_06206551.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis KIM D27]
gi|108774708|gb|ABG17227.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis Nepal516]
gi|108780591|gb|ABG14649.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis Antiqua]
gi|145211782|gb|ABP41189.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis Pestoides F]
gi|270337981|gb|EFA48758.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis KIM D27]
Length = 361
Score = 450 bits (1158), Expect = e-124, Method: Composition-based stats.
Identities = 141/360 (39%), Positives = 208/360 (57%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP + IA P R RL+ + ++ + +DL L D +V
Sbjct: 6 MRVADFSFELPEALIAHYPQPQRSGCRLLSLDGPTGT---LTHGIFTDLLDKLAPGDLLV 62
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + + SK K G L
Sbjct: 63 FNNTRVIPARLFGRKAS-----GGKLEVLVERVLDDHRVLAHVKASKAPKPGAELLLGDD 117
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT++ + +T + + ++ ++ VG +PLPPYI RP + D Y
Sbjct: 118 E---SIRATMLARHDT--LFELRFDDERDVFTILNAVGHMPLPPYI--DRPDEDADRELY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF +L+ L GI++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 171 QTVYSQRPGAVAAPTAGLHFDEPMLAALQEKGIEMAFVTLHVGAGTFQPVRVDTIEDHIM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+V+VGTTS+R LE+A E+G+I P+ G T IFI
Sbjct: 231 HSEYAEVPQEVVDAVLACKARGKRVVAVGTTSVRSLESAAKAAENGLIAPFFGDTRIFIY 290
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ VD L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD + +
Sbjct: 291 PGYHYQVVDALVTNFHLPESTLIMLVSAFAGYKNTMNAYQQAVAEQYRFFSYGDAMFISR 350
>gi|238755132|ref|ZP_04616479.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
ruckeri ATCC 29473]
gi|238706692|gb|EEP99062.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
ruckeri ATCC 29473]
Length = 356
Score = 450 bits (1158), Expect = e-124, Method: Composition-based stats.
Identities = 143/360 (39%), Positives = 210/360 (58%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ + +DL L + D +V
Sbjct: 1 MRVADFSFELPESLIAHYPQPQRSGCRLLSLDGPTGT---LTHGIFTDLLDKLEAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + + SK K G +
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKLEVLVERVLDDHRVLAHVKASKAPKPGTEMLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT++ + +T + + ++ ++ VG IPLPPYI RP + D Y
Sbjct: 113 E---SIRATMLARHDT--LFELRFDEEQDVFSILNAVGHIPLPPYI--DRPDEEADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF +L+ L + GI++ FVTLHVGAGTF PV+VE ++HIM
Sbjct: 166 QTVYSQRPGAVAAPTAGLHFDEPMLAALRNKGIEMAFVTLHVGAGTFQPVRVESIEEHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+V+VGTTS+R LE+A +EDG+I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLACKARGKRVVAVGTTSVRSLESAANASEDGVIAPFYGDTRIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ VD L++NFHLP+STL+MLVSAF G + T YQ A+ YRF+SYGD + +
Sbjct: 286 PGYHYQVVDALVTNFHLPESTLIMLVSAFAGYKNTMNAYQQAVVEKYRFFSYGDAMFISR 345
>gi|146293581|ref|YP_001184005.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
putrefaciens CN-32]
gi|166217770|sp|A4Y8C3|QUEA_SHEPC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|145565271|gb|ABP76206.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Shewanella
putrefaciens CN-32]
gi|319426880|gb|ADV54954.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Shewanella
putrefaciens 200]
Length = 345
Score = 450 bits (1158), Expect = e-124, Method: Composition-based stats.
Identities = 138/360 (38%), Positives = 208/360 (57%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R+++RL+ + N + D ++L +N D +V
Sbjct: 1 MRVADFSFDLPDELIARYPMAQRNASRLLTLDGNSGA---LGDKQFTELLEMINPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + + R SK K ++H
Sbjct: 58 FNNTRVIPARMFGQKAS-----GGKLEILVERMLDDKRILAHVRSSKSPKVDSLIHL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DG +++ ++ + +T + + +S + + + VG +PLPPYI RP + D Y
Sbjct: 110 DGGYQMK--MVARHDT--LFELELLSELTILEVLEAVGHMPLPPYI--DRPDEDADKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF +L L + G+ + FVTLHVGAGTF PV+V++ +H M
Sbjct: 164 QTVYNQNPGAVAAPTAGLHFDDAMLDALKAKGVNIAFVTLHVGAGTFQPVRVDNVLEHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFITP 299
HSE + + K+ G R+V+VGTTS+R LE+A G + +SG T+IFI P
Sbjct: 224 HSEWANVPQDVVDLIAQTKAAGKRVVAVGTTSVRSLESAARASLGELKAFSGDTDIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY+F+ VD +++NFHLP+STL+MLVSAF G + YQHAI+ YRF+SYGD + +K
Sbjct: 284 GYQFQVVDAMVTNFHLPESTLIMLVSAFAGFDHVMAAYQHAITQKYRFFSYGDAMFVTKK 343
>gi|163731371|ref|ZP_02138818.1| S-adenosylmethionine [Roseobacter litoralis Och 149]
gi|161394825|gb|EDQ19147.1| S-adenosylmethionine [Roseobacter litoralis Och 149]
Length = 351
Score = 450 bits (1158), Expect = e-124, Method: Composition-based stats.
Identities = 171/361 (47%), Positives = 222/361 (61%), Gaps = 14/361 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RP PR SARL+V ISD +VSDLP +L+ D +V
Sbjct: 1 MKLSDFDFDLPEDLIATRPAVPRTSARLLVAKGQ-----QISDSIVSDLPNWLSPGDRLV 55
Query: 61 FNNTKVITAQLNGVRF--CHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L G R + I TL + WS +P K +K G+ + F
Sbjct: 56 LNDTRVIPARLTGARHRDTAQGPMQARIEVTLLEPDARGDWSALIKPLKKVKIGEEIIF- 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
L AT+ + G+ L F++ G + + ++ G +PLPPYIA +RP D RD
Sbjct: 115 ----SDVLRATLQSVTD-GQGFLKFNLEGDDFDAALNAAGAMPLPPYIATRRPADERDKS 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LLS L + G+ +VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVFAQNNGAVAAPTASLHFDEALLSELAARGVLFSYVTLHVGAGTFLPVKVEDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A A +N+ K G R++ VGTT+LRL+ETA E G I W G T+IFI
Sbjct: 230 KMHAEWGQVSAVAAAEINATKQAGKRVIPVGTTALRLIETAGRE-GQITAWEGDTDIFIY 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+RF D LM+NFHLPKSTL+MLVSA G +E + +Y HAI+ YRF+SYGD SLL
Sbjct: 289 PGFRFNVADALMTNFHLPKSTLMMLVSALMGYDEVRTIYNHAIAEKYRFFSYGDASLLIP 348
Query: 359 K 359
K
Sbjct: 349 K 349
>gi|269215268|ref|ZP_05988032.2| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
lactamica ATCC 23970]
gi|269207922|gb|EEZ74377.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
lactamica ATCC 23970]
Length = 356
Score = 450 bits (1158), Expect = e-124, Method: Composition-based stats.
Identities = 153/360 (42%), Positives = 210/360 (58%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P++S + D + DLP ++ + D +V
Sbjct: 11 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPDMS----LQDRVFGDLPDYVEAGDVLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 67 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 119 --EGGIRAVMVGR--EGELFCLRFEGGQTVYELLEQNGHLPLPPYI--ERAADADDDSRY 172
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+VE ++H M
Sbjct: 173 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVEKIEEHKM 232
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + T A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 233 HSEWFEVPSETVTAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 292
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRF VD L++NFHLPKSTLLMLVSAF G+ + Y++A+ YRF+SYGD +L +
Sbjct: 293 YRFNVVDRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGDAMILGRNE 352
>gi|220922620|ref|YP_002497922.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Methylobacterium nodulans ORS 2060]
gi|219947227|gb|ACL57619.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylobacterium nodulans ORS 2060]
Length = 364
Score = 450 bits (1158), Expect = e-124, Method: Composition-based stats.
Identities = 194/363 (53%), Positives = 246/363 (67%), Gaps = 10/363 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP + IALRP PRDSARLM V P D V DLP L D +V
Sbjct: 4 MRVDLFDFDLPEALIALRPAVPRDSARLMRVRPGEPPA----DAQVRDLPDLLRPGDCLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI A+L G+R + LH R + + W +ARP+K +++GD + F +
Sbjct: 60 FNDTKVIPARLRGLRARPDG-TVVRVEAMLHHREAADCWRAFARPAKRLREGDRIRFGAG 118
Query: 121 DGQ-----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
L+ATV+ + GEI L F ++G L+ + +G +PLPPYIA +RP DAR
Sbjct: 119 QEGAACDLGHLDATVVARGEGGEITLAFDLAGAVLDEAVVRLGELPLPPYIAGRRPADAR 178
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D DYQT YA+ G+VAAPTAGLHFT +LL+RL + GI VTLHVGAGTF+PVK EDT
Sbjct: 179 DAADYQTVYARAPGAVAAPTAGLHFTPDLLARLDAAGIGQARVTLHVGAGTFLPVKAEDT 238
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
DH MH+E G I TA ALN V++ GGRIV+VGTT+LRL+E+A DG + P++G T+I
Sbjct: 239 ADHRMHAETGEITPETAAALNRVRAAGGRIVAVGTTALRLVESAAAPDGTLRPFAGETDI 298
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFRAVD+LM+NFHLP+STL MLVSAF G++ ++ Y AI+ YRFYSYGD+SL
Sbjct: 299 FITPGYRFRAVDVLMTNFHLPRSTLFMLVSAFAGLDTMREAYAAAIARGYRFYSYGDSSL 358
Query: 356 LFQ 358
LF+
Sbjct: 359 LFR 361
>gi|163746642|ref|ZP_02153999.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Oceanibulbus indolifex HEL-45]
gi|161379756|gb|EDQ04168.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Oceanibulbus indolifex HEL-45]
Length = 348
Score = 450 bits (1157), Expect = e-124, Method: Composition-based stats.
Identities = 164/360 (45%), Positives = 226/360 (62%), Gaps = 14/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RP PR SARL+V + D V+DL +L D +V
Sbjct: 1 MKLSDFDFDLPEELIATRPANPRSSARLLVAEG-----AQLHDRRVTDLTDWLRPGDRLV 55
Query: 61 FNNTKVITAQLNGVRF--CHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L+G+R + +I TL +WS +P + +K G+ + F
Sbjct: 56 LNDTRVIPARLSGLRHRASAQGAVQAKIEVTLLEPRGDGTWSALIKPLRKLKIGEEVIF- 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
S D ++ LEA G+ L F+ +G + + ++ G +PLPPYIA KR DA+D
Sbjct: 115 SDDLRATLEAV-----EDGQGHLRFNCAGDDFDAALNAAGAMPLPPYIAAKRAADAQDMT 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LL+ L + G+ VTLHVGAGTF+PVKV+D +H
Sbjct: 170 DYQTVFARHAGAVAAPTASLHFDETLLAALAAKGVTFSHVTLHVGAGTFLPVKVDDISEH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A A+ + + ++ GGR++ VGTT+LRL+ETA DG I W G T+IFIT
Sbjct: 230 KMHAEWGRVSAEAAEEITATRAAGGRVIPVGTTALRLIETAAR-DGQITAWEGDTDIFIT 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ F D LM+NFHLPKSTL+MLVSA G+++ K +Y HAI+ YRF+SYGD+SLL
Sbjct: 289 PGFTFNVTDGLMTNFHLPKSTLMMLVSALMGVQQVKDIYAHAIAEKYRFFSYGDSSLLLP 348
>gi|119478666|ref|ZP_01618556.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein ) [marine gamma proteobacterium
HTCC2143]
gi|119448392|gb|EAW29644.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein ) [marine gamma proteobacterium
HTCC2143]
Length = 349
Score = 450 bits (1157), Expect = e-124, Method: Composition-based stats.
Identities = 136/360 (37%), Positives = 194/360 (53%), Gaps = 11/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F+F LP IA P R +RL+V+ I +DL LN D +V
Sbjct: 1 MQLSDFNFQLPNHLIARYPTTNRTDSRLLVLDGQSGD---IQHQQFNDLSELLNDGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + I + + + R SK K G +LH
Sbjct: 58 FNDTRVIPARLWGKK-----STGGRIEILVERIIDSQRVLAHIRSSKSPKAGAVLHLHQN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
ATV + + E ++ +G +PLPPYI R + D Y
Sbjct: 113 ANSDETMATVTVVGRHDALFELMFDGEKEALSVLNSIGHMPLPPYI--DRSDELADRERY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y K G+VAAPTAGLHF+ + + G+ FVTLHVGAGTF PV+V + +H M
Sbjct: 171 QTVYGKKDGAVAAPTAGLHFSEQFIQHCQNKGVDTAFVTLHVGAGTFQPVRVSNITEHKM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + + + + RGGR+++VGTTS+R LETA + G + P+SG + IFI PG
Sbjct: 231 HAEWLEVSEQVCEKVRLTRQRGGRVIAVGTTSVRSLETA-SHSGELQPFSGDSEIFIYPG 289
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
Y+F++VD +++NFHLP+STL+MLVSAF E + Y+ A+ H YRF+SYGD + +R
Sbjct: 290 YQFKSVDAMLTNFHLPESTLIMLVSAFANREHVLEAYRTAVEHNYRFFSYGDAMFVLPQR 349
>gi|329577860|gb|EGG59281.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecalis TX1467]
Length = 343
Score = 450 bits (1157), Expect = e-124, Method: Composition-based stats.
Identities = 149/355 (41%), Positives = 206/355 (58%), Gaps = 17/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++FDFDLP IA P+ R S+RL+VV+ + D D+ L DA+V N
Sbjct: 4 TEDFDFDLPEELIAQTPLKDRASSRLLVVNKETGD---MEDKHFHDIHDELQPGDALVMN 60
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
T+V+ A+L G + + L ++W +P+K K G + F G
Sbjct: 61 ITRVLPARLYGEK----PETGGHLEVLLLTNTEGDTWETLIKPAKRAKVGTEIQF----G 112
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
RL+A V ++ G ++ F GI LE + +G +PLPPYI + D YQT
Sbjct: 113 DGRLKAVVKEELEHGGRIIEFKYDGIFLE-ILESLGEMPLPPYIKERLD----DPDRYQT 167
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ GS AA TAGLHFT LL + + G+ + ++TLHVG GTF PV V++ ++H MHS
Sbjct: 168 VYAEENGSAAASTAGLHFTKELLEEIKAKGVHLVYLTLHVGLGTFRPVSVDNIEEHHMHS 227
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + A+ LN V+ GGRIV+VGTTS+R LET T+ +G I SG+T+IFITPGY
Sbjct: 228 EFYRLTEEAAKQLNEVRQAGGRIVAVGTTSIRTLETIGTKFNGEIQADSGWTDIFITPGY 287
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+F+ V+ +NFHLPKSTL+MLVSAF G + T YQHAI YRF+S+GD +
Sbjct: 288 QFKVVEAFSTNFHLPKSTLVMLVSAFAGKDLTLAAYQHAIEEKYRFFSFGDAMFI 342
>gi|56963322|ref|YP_175053.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
clausii KSM-K16]
gi|81600944|sp|Q5WHR3|QUEA_BACSK RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|56909565|dbj|BAD64092.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
clausii KSM-K16]
Length = 342
Score = 450 bits (1157), Expect = e-124, Method: Composition-based stats.
Identities = 146/356 (41%), Positives = 199/356 (55%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V EFDFDLP IA P+ R ++RL+VV ISD + DL L+ D +V
Sbjct: 1 MDVNEFDFDLPEELIAQTPLKTRTNSRLLVVDKKTKA---ISDRMFPDLIEALSPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G + + I L ++ + W +P+K +K G + F
Sbjct: 58 LNDTKVMPARLLGEKV----ETKAVIELLLLKQLEGDCWETLVKPAKRVKIGTEVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L A G + F SG+ + +GT+PLPPYI + D Y
Sbjct: 111 -GDGKLTAICTAVQPQGGRIFEFRYSGV-FYELLEELGTMPLPPYIKER----LEDADRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHF+ LL + + G+K+ ++TLHVG GTF PV +DH M
Sbjct: 165 QTVYAKQIGSAAAPTAGLHFSEQLLLEIEAKGVKIVYITLHVGLGTFRPVSASSVEDHQM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + A L S + GG I++VGTTS R LET ++ G SG+T+IFI PG
Sbjct: 225 HAEYYQVTEEAAHTLASARENGGNIIAVGTTSARTLETIYSDHGAFVAASGWTSIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+++A+D L++NFHLPKSTL+MLVSA G E Y HAI YRF+S+GD +
Sbjct: 285 YKYQAIDGLLTNFHLPKSTLVMLVSALIGKEALMDAYAHAIKERYRFFSFGDAMFI 340
>gi|27379800|ref|NP_771329.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bradyrhizobium japonicum USDA 110]
gi|46577026|sp|Q89L59|QUEA_BRAJA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|27352953|dbj|BAC49954.1| S-adenosylmethionine tRNA ribosyltransferase [Bradyrhizobium
japonicum USDA 110]
Length = 366
Score = 450 bits (1157), Expect = e-124, Method: Composition-based stats.
Identities = 188/361 (52%), Positives = 239/361 (66%), Gaps = 10/361 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M FDFDLP RIALRP PRDSA+++VV + D +S+LP +L D +V
Sbjct: 1 MRTDLFDFDLPAERIALRPASPRDSAKMLVVEGG-----ALRDRTISELPQWLKRGDQLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI AQL G R E +I TL R+ + W +P+K + GD + F ++
Sbjct: 56 VNDTKVIAAQLKGRRI--GRETEPKIEATLIKRLDGSRWQALVKPAKKLIAGDRIRFGNE 113
Query: 121 DG---QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+A V K + GE+ L FS G L++ I+ +G+ PLPPYIA KR D +D+
Sbjct: 114 GKVCLLGHLDAEVEAKGSEGEVTLSFSFHGPALDQAIADLGSPPLPPYIASKRTPDDQDF 173
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT +A +G+VAAPTAGLHFT L L G+ + VTLHVGAGTF+PVKVEDT
Sbjct: 174 ADYQTMFAANEGAVAAPTAGLHFTPALEQALRERGVGLNRVTLHVGAGTFLPVKVEDTAG 233
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+E G I A TA+ LN + GGRI++VGTTSLRLLE+A +EDG I P++ T+IFI
Sbjct: 234 HKMHAEWGTISAETAERLNIARHNGGRIIAVGTTSLRLLESAASEDGTIQPFAAETSIFI 293
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFRAVDIL++NFHLPKSTL MLVSAF G+E ++ Y HAI+ YRFYSYGD LLF
Sbjct: 294 TPGYRFRAVDILLTNFHLPKSTLFMLVSAFSGLETMRRAYAHAIAQGYRFYSYGDACLLF 353
Query: 358 Q 358
+
Sbjct: 354 R 354
>gi|317047142|ref|YP_004114790.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Pantoea sp.
At-9b]
gi|316948759|gb|ADU68234.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Pantoea sp.
At-9b]
Length = 383
Score = 450 bits (1157), Expect = e-124, Method: Composition-based stats.
Identities = 141/361 (39%), Positives = 206/361 (57%), Gaps = 19/361 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + +S + +D+ LN D +V
Sbjct: 28 MRVADFSFELPESLIAHYPQAQRSGCRLLSLDGPSGA---LSHGVFTDVLEKLNPGDLLV 84
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + R SK K G L
Sbjct: 85 FNNTRVIPARVYGRKAS-----GGKIEMLVERMLDDKRVLAHVRASKAPKPGAELLLGDD 139
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ ++AT++ + +T L + + ++ VG +PLPPYI RP + D
Sbjct: 140 E---SVKATMVARHDT---LFEIAFEDDRAVLDILNSVGHMPLPPYI--DRPDEEADREL 191
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y+ G+VAAPTAGLHF LL L + G+++ FVTLHVGAGTF PV+VE +DH
Sbjct: 192 YQTVYSARPGAVAAPTAGLHFDDPLLQALKAKGVEMAFVTLHVGAGTFQPVRVESIEDHT 251
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFI 297
MHSE + A+ + K+RG ++V+VGTTS+R LE+A ++D +I P+ T IFI
Sbjct: 252 MHSEYAEVPQEVVDAVLACKARGNKVVAVGTTSVRSLESAAQASKDALIAPFFDDTQIFI 311
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD +
Sbjct: 312 YPGYQYQVIDALITNFHLPESTLIMLVSAFAGYQHTMAAYQAAVAEQYRFFSYGDAMFIT 371
Query: 358 Q 358
+
Sbjct: 372 R 372
>gi|197283988|ref|YP_002149860.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Proteus
mirabilis HI4320]
gi|238693147|sp|B4EU12|QUEA_PROMH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|194681475|emb|CAR40314.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Proteus
mirabilis HI4320]
Length = 357
Score = 450 bits (1157), Expect = e-124, Method: Composition-based stats.
Identities = 138/360 (38%), Positives = 208/360 (57%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP S IA P R RL+ + +S + +D+ LN+ D +V
Sbjct: 1 MRVSDFRFDLPESLIAHYPHPQRSGCRLLSLEGKTGN---LSHGVFTDVLDKLNAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARIYGRKAS-----GGKIEVLVERMLDEHRVLAHVRASKSPKEGASLILGED 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++AT+I + +T + + ++ ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SVQATMIARHDT--LFEIRFDDERDVLTILNSIGHMPLPPYI--DRPDERSDKELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL L + G+++ FVTLHVGAGTF PV+V++ ++H M
Sbjct: 166 QTVYNERPGAVAAPTAGLHFDEPLLEALRNKGVEMAFVTLHVGAGTFQPVRVDNIEEHTM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A +D +I P+ T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLACKARGNRVIAVGTTSVRSLESAAKAAKDALIAPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y A+ YRF+SYGD + +
Sbjct: 286 PGYQYQIIDALITNFHLPESTLIMLVSAFAGYKNTMNAYNVAVEQKYRFFSYGDAMFITR 345
>gi|81427982|ref|YP_394981.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus sakei subsp. sakei 23K]
gi|91207426|sp|Q38YQ8|QUEA_LACSS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|78609623|emb|CAI54669.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase
[Lactobacillus sakei subsp. sakei 23K]
Length = 343
Score = 450 bits (1157), Expect = e-124, Method: Composition-based stats.
Identities = 147/355 (41%), Positives = 202/355 (56%), Gaps = 17/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++FD++LP IA P+ R ++RL+V+ + D + D+ LN DA+V N
Sbjct: 4 TEDFDYNLPEELIAQTPMIERAASRLLVMDHETGA---LEDKVFYDIIDELNPGDAVVMN 60
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NT+V+ A+L GV+ L + W V +P+K K G + F G
Sbjct: 61 NTRVLPARLYGVK----PDTGGHEEVLLLNNTHDDEWEVLMKPAKRAKVGTEVVF----G 112
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+L A V + G ++ F GI + + +G +PLPPYI K D YQT
Sbjct: 113 DGQLRAIVTKELEHGGRMIEFKYDGI-FMQILEALGEMPLPPYIKEKLD----DPEMYQT 167
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YAK GS AAPTAG H+T LL ++ GIK+ ++TLHVG GTF PV ++ +DH MHS
Sbjct: 168 VYAKEPGSAAAPTAGFHWTEELLQKVQDKGIKLVYLTLHVGLGTFRPVSEDNVEDHKMHS 227
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E + A LN VK GGRIV+ GTTS+R LET T+ DG I SG+T IFI PGY
Sbjct: 228 EFYRLTEEAAATLNEVKQNGGRIVATGTTSIRTLETIATKFDGEIKADSGWTEIFIKPGY 287
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+++AVD ++NFHLPKSTL+MLV++F G E YQHA+ YRF+S+GD +
Sbjct: 288 QWKAVDAFITNFHLPKSTLVMLVASFTGRENILNAYQHAVDERYRFFSFGDAMFV 342
>gi|238791401|ref|ZP_04635039.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
intermedia ATCC 29909]
gi|238729017|gb|EEQ20533.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
intermedia ATCC 29909]
Length = 361
Score = 450 bits (1157), Expect = e-124, Method: Composition-based stats.
Identities = 140/360 (38%), Positives = 208/360 (57%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ + +DL L D +V
Sbjct: 6 MRVADFSFELPESLIAHYPQPQRSGCRLLSLDGPTGT---LTHGIFTDLLDKLTPGDLLV 62
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + + SK K G L
Sbjct: 63 FNNTRVIPARLFGRKAS-----GGKLEVLVERVLDDHRVLAHVKASKAPKPGAELLLGDD 117
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT++ + +T + + ++ ++ VG +PLPPYI RP + D Y
Sbjct: 118 E---SIRATMLARHDT--LFELRFDDERDVFTILNAVGHMPLPPYI--DRPDEDADRELY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K G+VAAPTAGLHF +L+ L + GI++ FVTLHVGAGTF PV+V+ ++HIM
Sbjct: 171 QTVYSKRPGAVAAPTAGLHFDEPMLAALRAKGIEMAFVTLHVGAGTFQPVRVDTIEEHIM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+V+VGTTS+R LE+A ++ +I P+ G T IFI
Sbjct: 231 HSEYAEVPQDVVDAVLACKARGNRVVAVGTTSVRSLESAAKAAQNSLIAPFFGDTRIFIY 290
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ VD L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD + +
Sbjct: 291 PGYHYQVVDALVTNFHLPESTLIMLVSAFAGYKNTMNAYQQAVAEQYRFFSYGDAMFISR 350
>gi|146310535|ref|YP_001175609.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterobacter sp. 638]
gi|167016406|sp|A4W778|QUEA_ENT38 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|145317411|gb|ABP59558.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Enterobacter sp. 638]
Length = 356
Score = 450 bits (1157), Expect = e-124, Method: Composition-based stats.
Identities = 141/359 (39%), Positives = 201/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ +DL LN D +V
Sbjct: 1 MRVADFSFELPESLIAHYPQPERSGCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT++ + + + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SINATMVARHDA--LFEVEFNDARPVLDILNAIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL RL GI++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSQKPGAVAAPTAGLHFDEPLLERLREKGIEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A + +I P+ G T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKKDLIEPFFGDTKIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGYQYTVIDALVTNFHLPESTLIMLVSAFAGYQNTMNAYKAAVEQNYRFFSYGDAMFIT 344
>gi|152996661|ref|YP_001341496.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Marinomonas sp. MWYL1]
gi|189038527|sp|A6VYN2|QUEA_MARMS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|150837585|gb|ABR71561.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Marinomonas sp. MWYL1]
Length = 353
Score = 449 bits (1156), Expect = e-124, Method: Composition-based stats.
Identities = 138/358 (38%), Positives = 207/358 (57%), Gaps = 16/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V ++ FDLP S IA P+ R ++RL+ + + + D+ + D +V
Sbjct: 1 MLVSDYHFDLPDSLIANYPMPDRTASRLLHLDGHSG---EVVHRQFPDVLDLVQPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + ++ N + R SK K+ L
Sbjct: 58 FNNTRVIPARVFGQKES-----GGKVEILVERVINVNEALAHVRASKSPKESSKLILGQD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +EAT+I + L + + + G +PLPPYI +RP + D Y
Sbjct: 113 KGE-HIEATMIGRSGA----LFHLVFDEPVLDVLMRAGHMPLPPYI--ERPDEDSDQERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL +L + G++ FVTLHVGAGTF P+KVE+ DHIM
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDEALLEKLKAKGVETAFVTLHVGAGTFQPMKVENVKDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E ++ + + + K+RGGR+++VGTTS+R LE+A ++ G I P G T+IFI PG
Sbjct: 226 HAEYVEVEPSVVEQVKAAKARGGRVIAVGTTSVRSLESA-SQSGEIAPMQGDTSIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y F+ VD L++NFHLP+STL+ML+SAF G + Y+ A+ YRF+SYGD + +
Sbjct: 285 YEFKTVDALVTNFHLPESTLIMLISAFAGYDHVMAAYKKAVEQKYRFFSYGDAMFVTR 342
>gi|319775882|ref|YP_004138370.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae F3047]
gi|317450473|emb|CBY86690.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae F3047]
Length = 363
Score = 449 bits (1156), Expect = e-124, Method: Composition-based stats.
Identities = 136/365 (37%), Positives = 201/365 (55%), Gaps = 17/365 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+F+LP IA P R S RL+ ++ I SD+ ++ D ++
Sbjct: 1 MRVSDFNFNLPDELIARYPKTDRVSCRLLQLNGENG---EIFHRTFSDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKIEVLVERMLDEHRFLAHIRSSKSPKEGAELFLGED 112
Query: 121 D-GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G++ V+ ++ + S L + +G +PLP YI RP + D
Sbjct: 113 KLGENNGIKAVMKARHSSLFEVELSDKSTALLDVLQTIGHMPLPLYI--DRPDEEADKEC 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y+K+ G+VAAPTAGLHF LL +L G+ FVTLHVGAGTF PV+VE+ +DH+
Sbjct: 171 YQTVYSKVPGAVAAPTAGLHFDDPLLEKLKKKGVNFEFVTLHVGAGTFQPVRVENIEDHV 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT------TEDGIINPWSGFT 293
MH+E + A+ + K G R+++VGTTS+R +E+A +I P+ T
Sbjct: 231 MHAEYVEVSQEVCNAIIATKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSDT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + T Y+HA+ YRF+SYGD
Sbjct: 291 SIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKHAVQEKYRFFSYGDA 350
Query: 354 SLLFQ 358
+ +
Sbjct: 351 MFINK 355
>gi|153947233|ref|YP_001402084.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pseudotuberculosis IP 31758]
gi|167016409|sp|A7FLF6|QUEA_YERP3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|152958728|gb|ABS46189.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pseudotuberculosis IP 31758]
Length = 356
Score = 449 bits (1156), Expect = e-124, Method: Composition-based stats.
Identities = 141/360 (39%), Positives = 208/360 (57%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP + IA P R RL+ + ++ + +DL L D +V
Sbjct: 1 MRVADFSFELPEALIAHYPQPQRSGCRLLSLDGPTGT---LTHGIFTDLLDKLAPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + + SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKLEVLVERVLDDHRVLAHVKASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT++ + +T + + ++ ++ VG +PLPPYI RP + D Y
Sbjct: 113 E---NIRATMLARHDT--LFELRFDDERDVFTILNAVGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF +L+ L GI++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSQRPGAVAAPTAGLHFDEPMLAALQEKGIEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+V+VGTTS+R LE+A E+G+I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLACKARGKRVVAVGTTSVRSLESAAKAAENGLIAPFFGDTRIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ VD L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD + +
Sbjct: 286 PGYHYQVVDALVTNFHLPESTLIMLVSAFAGYKNTMNAYQQAVAEQYRFFSYGDAMFISR 345
>gi|119945875|ref|YP_943555.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Psychromonas ingrahamii 37]
gi|119864479|gb|ABM03956.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Psychromonas ingrahamii 37]
Length = 351
Score = 449 bits (1156), Expect = e-124, Method: Composition-based stats.
Identities = 139/363 (38%), Positives = 206/363 (56%), Gaps = 21/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LPP+ IA P+ R ++RL+ V N + +DL ++ ND ++
Sbjct: 4 MKVSDFSFELPPALIARYPMKDRSASRLLSVEGNSG---ELKHLQFTDLVDLIDENDLLI 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + +I + + S+ + R SK K G L
Sbjct: 61 FNDTRVIPARLFGEKE-----TGGKIEVLVERVLDDKSFLAHLRSSKSPKPGCKLRL--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
++ ++A ++ + G + + G + + +G +PLPPYI RP + D Y
Sbjct: 113 --ENSIDAVMLKR--QGPLFEIHIDHGSTVLEVLESIGHMPLPPYI--DRPDEDADKERY 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y K G+VAAPTAGLHF ++++L G+ FVTLHVGAGTF PVKV++ DH M
Sbjct: 167 QTVYNKNPGAVAAPTAGLHFDQAVMTKLQDKGVDFAFVTLHVGAGTFQPVKVDNILDHQM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
HSE + +N+ K++GGR+++VGTTS+R +E+A + P+ T+IF
Sbjct: 227 HSEYAEVSQEVIDKINTTKAKGGRVIAVGTTSVRSVESAAQVSVKMGNDLAPFFSETSIF 286
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+F+ +D L++NFHL +STLLMLVSAF G E Y+ AI YRF+SYGD L
Sbjct: 287 IYPGYQFQIIDALVTNFHLSESTLLMLVSAFSGKENIDNAYKVAIQEKYRFFSYGDAMFL 346
Query: 357 FQK 359
+K
Sbjct: 347 TKK 349
>gi|126174995|ref|YP_001051144.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
baltica OS155]
gi|166216751|sp|A3D6B2|QUEA_SHEB5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|125998200|gb|ABN62275.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Shewanella
baltica OS155]
Length = 345
Score = 449 bits (1156), Expect = e-124, Method: Composition-based stats.
Identities = 138/360 (38%), Positives = 204/360 (56%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R+++RL+ + N + D +DL +N D +V
Sbjct: 1 MRVADFSFDLPDELIARYPMAQRNASRLLTLDGNSGA---LGDKQFTDLLGMINPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + + R SK K F
Sbjct: 58 FNNTRVIPARMFGQKAS-----GGKLEILVERMLDDKRILAHVRSSKSPKVDS---FILL 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DG +++ ++ + +T + + +S + + + VG +PLPPYI RP + D Y
Sbjct: 110 DGGYQMK--MVARHDT--LFELELLSELTILEVLEAVGHMPLPPYI--DRPDEDADKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF +L L + + + FVTLHVGAGTF PV+V+ +H M
Sbjct: 164 QTVYNQNPGAVAAPTAGLHFDDAMLDALKAKDVNIAFVTLHVGAGTFQPVRVDTILEHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFITP 299
HSE + + K+ G R+V+VGTTS+R LE+A G + +SG T+IFI P
Sbjct: 224 HSEWANVPQDVVDLIAQTKAAGKRVVAVGTTSVRSLESAARASQGELKAFSGDTDIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY+F+ VD +++NFHLP+STL+MLVSAF G + YQHAI+ YRF+SYGD + +K
Sbjct: 284 GYQFQVVDAMVTNFHLPESTLIMLVSAFAGFDHVMAAYQHAIAQKYRFFSYGDAMFVTKK 343
>gi|90962099|ref|YP_536015.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus salivarius UCC118]
gi|227891121|ref|ZP_04008926.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus salivarius ATCC 11741]
gi|301301357|ref|ZP_07207499.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus salivarius ACS-116-V-Col5a]
gi|90821293|gb|ABD99932.1| S-adenosylmethionine tRNA ribosyltransferase-isomerase
[Lactobacillus salivarius UCC118]
gi|227866995|gb|EEJ74416.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus salivarius ATCC 11741]
gi|300851017|gb|EFK78759.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus salivarius ACS-116-V-Col5a]
Length = 347
Score = 449 bits (1156), Expect = e-124, Method: Composition-based stats.
Identities = 137/357 (38%), Positives = 200/357 (56%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++FD+DLP S IA P+ RD +R++++ D ++ LN DA+V
Sbjct: 6 LTTEDFDYDLPESLIAQTPLEERDQSRMLILDSKTG---EYQDDYFYNVIDQLNPGDALV 62
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+++V+ A++ GV+ + L + W +P++ K G + F
Sbjct: 63 MNDSRVMPARIYGVK----PETGGHVEVLLLNNTHGDEWETLVKPARRAKVGTKISF--- 115
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+ATV + G L+ F GI + +G +PLPPYI K Y
Sbjct: 116 -GDGALKATVTKELEHGGRLIEFEYDGI-FMEILDKLGEMPLPPYIKEKLEN----PEMY 169
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ GS AAPTAGLHFT LL ++ G+K+ ++TLHVG GTF PV ++ +DH M
Sbjct: 170 QTVYSREVGSAAAPTAGLHFTKELLHKIEEKGVKLVYLTLHVGLGTFRPVSEKNIEDHKM 229
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A LN V+ GGRIV+ GTTS+R LET T+ +G I SG+T+IFI P
Sbjct: 230 HSEFYRLTEEAAATLNEVRKNGGRIVATGTTSIRTLETIGTKYNGEIKADSGWTDIFIKP 289
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY ++ V ++NFHLPKSTL+MLV++F G E Y+HA+ YRF+S+GD +
Sbjct: 290 GYEWKVVQAFITNFHLPKSTLVMLVASFTGRENILNAYKHAVEEKYRFFSFGDAMFI 346
>gi|145639843|ref|ZP_01795444.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae PittII]
gi|145271061|gb|EDK10977.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae PittII]
Length = 362
Score = 449 bits (1156), Expect = e-124, Method: Composition-based stats.
Identities = 139/364 (38%), Positives = 203/364 (55%), Gaps = 17/364 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R S RL+ ++ IS SD+ ++ D ++
Sbjct: 1 MRVSDFNFDLPDELIARYPKIDRVSCRLLQLNGENG---EISHRTFSDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT VI A++ G + +I + + + + + R SK K+G L
Sbjct: 58 FNNTHVIPARMFGRKAS-----GGKIEVLVERMLDEHRFLAHIRSSKSPKEGTELFLGED 112
Query: 121 D-GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G++ V+ ++ + S L + +G +PLPPYI RP + D
Sbjct: 113 KLGENNGIKAVMKARHSSLFEVELSDKSTALLDVLQTIGHMPLPPYI--DRPDEEADQEC 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y+K+ G+VAAPTAGLHF NLL +L + G+ FVTLHVGAGTF PV+VE+ +DH+
Sbjct: 171 YQTVYSKVPGAVAAPTAGLHFDENLLEKLKAKGVNFEFVTLHVGAGTFQPVRVENIEDHV 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT------TEDGIINPWSGFT 293
MH+E + A+ + K G R+++VGTTS+R +E+A +I P+ T
Sbjct: 231 MHAEYVEVSQEVCNAIIATKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSDT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + T Y+ A+ + YRF+SYGD
Sbjct: 291 SIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKSAVENHYRFFSYGDA 350
Query: 354 SLLF 357
+
Sbjct: 351 MFIT 354
>gi|319783733|ref|YP_004143209.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317169621|gb|ADV13159.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 362
Score = 449 bits (1156), Expect = e-124, Method: Composition-based stats.
Identities = 199/363 (54%), Positives = 250/363 (68%), Gaps = 9/363 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP RIALRP PRDSA++++V P + D V DLP+ L++ D +V
Sbjct: 1 MRVDLFDFELPEERIALRPAQPRDSAKMLLVKPG----EELEDRTVGDLPSLLSAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R ++ TLHMR++P+ W + RP K I GD +HF
Sbjct: 57 FNDTKVIPAQLKGIRRRG--EATAQVEATLHMRMAPDRWLAFMRPGKRIAAGDRIHFGHD 114
Query: 121 DGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+L+ATVI+K GE LL F +SG L+ + VG IPLPPYIA KR D RD
Sbjct: 115 GNSCFLGQLDATVIEKGEGGEALLGFDLSGPFLDEALHAVGHIPLPPYIASKRDDDERDR 174
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YA +G+VAAPTAGLHFT L + L + G++ FVTLHVGAGTF+PVK +DT D
Sbjct: 175 ADYQTIYASEEGAVAAPTAGLHFTPELFAALDAKGVERRFVTLHVGAGTFLPVKADDTAD 234
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+E G + TA ALN+ ++RGGRIV+VGTTSLRLLE+A EDG + WSG T+IFI
Sbjct: 235 HKMHAETGSVSEATADALNAARARGGRIVAVGTTSLRLLESAAREDGTLAAWSGPTDIFI 294
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFR D+LM+NFHLP+STL MLVSAF G++ + Y HAI++ YRFYSYGD SLLF
Sbjct: 295 TPGYRFRTADMLMTNFHLPRSTLFMLVSAFSGLDTMRAAYAHAIANRYRFYSYGDASLLF 354
Query: 358 QKR 360
+
Sbjct: 355 RAE 357
>gi|307947103|ref|ZP_07662438.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseibium
sp. TrichSKD4]
gi|307770767|gb|EFO29993.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseibium
sp. TrichSKD4]
Length = 357
Score = 449 bits (1156), Expect = e-124, Method: Composition-based stats.
Identities = 198/360 (55%), Positives = 251/360 (69%), Gaps = 6/360 (1%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDF LP RIALRP PRDSAR++VV P +SD V DLP L DA+V
Sbjct: 1 MRVEDFDFVLPNERIALRPARPRDSARMLVVQP--GDTAELSDFGVRDLPLLLEPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G R E IS TLH+R + + W + RP K ++ GD+L F +
Sbjct: 59 FNDTKVIPAQLEGKRVRG--DIEARISATLHLRAAADRWKAFVRPGKKVQLGDVLVF--E 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+G L A +K G++LLVF S EL+ I+ VG IPLPPYIA+KR D +D DY
Sbjct: 115 EGGVTLTARAEEKSPAGDVLLVFDRSAAELDEAIASVGHIPLPPYIAQKRGEDEQDRSDY 174
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHFT +LL+ L + GI+ + VTLHVGAGTF+PVKV+DTDDH M
Sbjct: 175 QTMFAEKDGAVAAPTAGLHFTPDLLAALDARGIEQHRVTLHVGAGTFLPVKVDDTDDHQM 234
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G + TA AL +VK+RG ++VSVGTTSLR+LE+A G + ++G T+IFITPG
Sbjct: 235 HAEWGEVSEETAAALQAVKARGNKVVSVGTTSLRILESAAQGSGGLQAFAGETSIFITPG 294
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
Y FRA+D LM+NFHLP+STL MLVSA G++ K+ Y HAI H YRFYSYGD SLLF ++
Sbjct: 295 YEFRAIDALMTNFHLPRSTLFMLVSALSGLDVMKRAYTHAIDHEYRFYSYGDASLLFPQK 354
>gi|167629905|ref|YP_001680404.1| s-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Heliobacterium modesticaldum Ice1]
gi|238687889|sp|B0TF76|QUEA_HELMI RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|167592645|gb|ABZ84393.1| s-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Heliobacterium modesticaldum Ice1]
Length = 344
Score = 449 bits (1156), Expect = e-124, Method: Composition-based stats.
Identities = 144/358 (40%), Positives = 204/358 (56%), Gaps = 15/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +D++LP IA PV PRD++RLMV+ + + DL L+ D +V
Sbjct: 1 MEVALYDYELPKEAIAQTPVEPRDASRLMVLERRTGA---VDHRIFRDLVHILHPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N T+VI A+L G + + + L + + W V RP + +K G F
Sbjct: 58 VNRTRVIPARLFGKK----RDSDVTVEIVLLTPMGDDRWEVLVRPGRRLKPG----VFVD 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ RL A +++ + G ++ F SG + + I +G +PLPPYI P Y
Sbjct: 110 LGEGRLAAEIVETTDFGGRVVRFHYSG-DFDTLIDEIGQMPLPPYIETALPRQEA--ERY 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ +GS AAPTAGLHFT LL L GI++ V LHVG GTF PV+V+ ++H M
Sbjct: 167 QTVYSQERGSAAAPTAGLHFTPQLLEDLKKRGIEITSVLLHVGLGTFRPVQVDRIEEHKM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-EDGIINPWSGFTNIFITP 299
HSE +D A+A+ K G R+++VGTT R LETA +G + SG+T+IFI P
Sbjct: 227 HSEFFQVDPEAARAIAKAKQEGRRVIAVGTTVARTLETAAGLHNGTVAAGSGWTDIFIYP 286
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY F+ +D L++NFHLP+STLLMLVSAF G E+ Y+ A+ YRF+S+GD L+
Sbjct: 287 GYTFQCIDGLITNFHLPRSTLLMLVSAFAGREQVLAAYREALEKGYRFFSFGDAMLII 344
>gi|152968929|ref|YP_001334038.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|206577784|ref|YP_002240128.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Klebsiella
pneumoniae 342]
gi|238893341|ref|YP_002918075.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Klebsiella
pneumoniae NTUH-K2044]
gi|288936877|ref|YP_003440936.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Klebsiella
variicola At-22]
gi|290510067|ref|ZP_06549437.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Klebsiella
sp. 1_1_55]
gi|330006899|ref|ZP_08305771.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Klebsiella
sp. MS 92-3]
gi|166216728|sp|A6T5D7|QUEA_KLEP7 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|226713843|sp|B5Y0Y7|QUEA_KLEP3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|150953778|gb|ABR75808.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|206566842|gb|ACI08618.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Klebsiella
pneumoniae 342]
gi|238545657|dbj|BAH62008.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Klebsiella
pneumoniae subsp. pneumoniae NTUH-K2044]
gi|288891586|gb|ADC59904.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Klebsiella
variicola At-22]
gi|289776783|gb|EFD84781.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Klebsiella
sp. 1_1_55]
gi|328535653|gb|EGF62102.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Klebsiella
sp. MS 92-3]
Length = 354
Score = 449 bits (1156), Expect = e-124, Method: Composition-based stats.
Identities = 138/359 (38%), Positives = 203/359 (56%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +D+ LN D +V
Sbjct: 1 MRVTDFAFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDILDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++AT++ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SIKATMLARH--GALFEVEFNDERPVLEILNGIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ ++H M
Sbjct: 166 QTVYGTRPGAVAAPTAGLHFDEPLLDKLRAKGVEMAFVTLHVGAGTFQPVRVDSIEEHTM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A +D +I P+ T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKDALIAPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGYQYQVIDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKVAVEQKYRFFSYGDAMFIT 344
>gi|254562239|ref|YP_003069334.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Methylobacterium extorquens DM4]
gi|254269517|emb|CAX25483.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein queA) [Methylobacterium extorquens
DM4]
Length = 368
Score = 449 bits (1156), Expect = e-124, Method: Composition-based stats.
Identities = 195/364 (53%), Positives = 255/364 (70%), Gaps = 10/364 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP + IALRP PRD++RL+VV P ++D V DLP+ L+ DA+V
Sbjct: 1 MRVDLFDFELPEAAIALRPASPRDASRLLVVRPG----DPLADRGVRDLPSLLSPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L+G+R + LH+R +P+ W +ARP+K + GD + F S+
Sbjct: 57 FNDTRVIPARLSGIRHRAGG-SGQRCEAMLHLREAPDRWRAFARPAKRLAPGDRIRFGSE 115
Query: 121 DGQ-----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
S L+ATV ++ GEILL F +SG L+ I+ +G +PLPPYIA KR DA+
Sbjct: 116 GASEVCALSGLDATVEERGEGGEILLRFDLSGPALDEAIAGLGALPLPPYIAGKRATDAQ 175
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D DYQT YA+ G+VAAPTAGLHF+ LL+ + + GI+ VTLHVGAGTF+PVK +DT
Sbjct: 176 DTTDYQTVYAREPGAVAAPTAGLHFSDALLAGIDAAGIERVHVTLHVGAGTFLPVKADDT 235
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
D H MH+EIG +DA TA LN+V++RG R+V+VGTT+LRLLE+A DG I P+SG T+I
Sbjct: 236 DAHRMHAEIGILDAATAARLNAVRARGNRVVAVGTTALRLLESAADPDGTIRPFSGATDI 295
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFRAVD L++NFHLP+STL MLVSAF G++ + Y HAI YRFYSYGD SL
Sbjct: 296 FITPGYRFRAVDALVTNFHLPRSTLFMLVSAFAGLDTMRAAYAHAIQSGYRFYSYGDASL 355
Query: 356 LFQK 359
LF +
Sbjct: 356 LFPE 359
>gi|327481774|gb|AEA85084.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
stutzeri DSM 4166]
Length = 349
Score = 449 bits (1156), Expect = e-124, Method: Composition-based stats.
Identities = 142/358 (39%), Positives = 202/358 (56%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP + IA P+ R ++RL+V+ +S +DL ++ D +V
Sbjct: 1 MQVADFYFELPDALIARHPLAERRASRLLVLDGQSG---QMSHRNFADLLDYVRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + S + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKA-----TGGKLEILVERVTGNRSVLAHVRSSKSPKPGSQILL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
A ++ + + L+ ++ + +G +PLPPYI RP DA D Y
Sbjct: 110 --DGGGAAEMVARHDALFELVFDE----DVLPLLERIGHMPLPPYI--DRPDDAADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL L + G++ +VTLHVGAGTF PV+VE ++H M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDEALLDALRNAGVQTAYVTLHVGAGTFQPVRVERIEEHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A+ + ++RGGR+++VGTTS+R LETA DG + P+SG T+IFI PG
Sbjct: 222 HREWLEVTQEVVDAVAACRARGGRVIAVGTTSVRSLETAAR-DGELKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y A++ YRF+SYGD + +
Sbjct: 281 KTFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAEAVAQRYRFFSYGDAMFITR 338
>gi|22124897|ref|NP_668320.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis KIM 10]
gi|45440588|ref|NP_992127.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Microtus str. 91001]
gi|149364962|ref|ZP_01886997.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis CA88-4125]
gi|162419575|ref|YP_001607728.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis Angola]
gi|165926608|ref|ZP_02222440.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Orientalis str. F1991016]
gi|165935850|ref|ZP_02224420.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Orientalis str. IP275]
gi|166010965|ref|ZP_02231863.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Antiqua str. E1979001]
gi|166212906|ref|ZP_02238941.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Antiqua str. B42003004]
gi|167398790|ref|ZP_02304314.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Antiqua str. UG05-0454]
gi|167421697|ref|ZP_02313450.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Orientalis str. MG05-1020]
gi|167423843|ref|ZP_02315596.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Mediaevalis str. K1973002]
gi|218930222|ref|YP_002348097.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis CO92]
gi|229838797|ref|ZP_04458956.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Orientalis str. PEXU2]
gi|229896049|ref|ZP_04511219.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis Pestoides A]
gi|229899365|ref|ZP_04514508.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Orientalis str. India 195]
gi|229901288|ref|ZP_04516410.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis Nepal516]
gi|294504920|ref|YP_003568982.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis Z176003]
gi|21263880|sp|Q8ZC32|QUEA_YERPE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|226713856|sp|A9R352|QUEA_YERPG RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|21957733|gb|AAM84571.1|AE013703_1 probably S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Yersinia pestis KIM 10]
gi|45435445|gb|AAS61004.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Microtus str. 91001]
gi|115348833|emb|CAL21787.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis CO92]
gi|149291375|gb|EDM41449.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis CA88-4125]
gi|162352390|gb|ABX86338.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis Angola]
gi|165915995|gb|EDR34602.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Orientalis str. IP275]
gi|165921536|gb|EDR38733.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Orientalis str. F1991016]
gi|165989965|gb|EDR42266.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Antiqua str. E1979001]
gi|166205693|gb|EDR50173.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Antiqua str. B42003004]
gi|166960616|gb|EDR56637.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Orientalis str. MG05-1020]
gi|167051294|gb|EDR62702.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Antiqua str. UG05-0454]
gi|167058013|gb|EDR67759.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Mediaevalis str. K1973002]
gi|229681217|gb|EEO77311.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis Nepal516]
gi|229687767|gb|EEO79840.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Orientalis str. India 195]
gi|229695163|gb|EEO85210.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Orientalis str. PEXU2]
gi|229700972|gb|EEO89001.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis Pestoides A]
gi|262362985|gb|ACY59706.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis D106004]
gi|262366906|gb|ACY63463.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis D182038]
gi|294355379|gb|ADE65720.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis Z176003]
gi|320016379|gb|ADV99950.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis biovar Medievalis str. Harbin 35]
Length = 356
Score = 449 bits (1155), Expect = e-124, Method: Composition-based stats.
Identities = 141/360 (39%), Positives = 208/360 (57%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP + IA P R RL+ + ++ + +DL L D +V
Sbjct: 1 MRVADFSFELPEALIAHYPQPQRSGCRLLSLDGPTGT---LTHGIFTDLLDKLAPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + + SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKLEVLVERVLDDHRVLAHVKASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT++ + +T + + ++ ++ VG +PLPPYI RP + D Y
Sbjct: 113 E---SIRATMLARHDT--LFELRFDDERDVFTILNAVGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF +L+ L GI++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSQRPGAVAAPTAGLHFDEPMLAALQEKGIEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+V+VGTTS+R LE+A E+G+I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLACKARGKRVVAVGTTSVRSLESAAKAAENGLIAPFFGDTRIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ VD L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD + +
Sbjct: 286 PGYHYQVVDALVTNFHLPESTLIMLVSAFAGYKNTMNAYQQAVAEQYRFFSYGDAMFISR 345
>gi|327483527|gb|AEA77934.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase [Vibrio
cholerae LMA3894-4]
Length = 351
Score = 449 bits (1155), Expect = e-124, Method: Composition-based stats.
Identities = 134/363 (36%), Positives = 204/363 (56%), Gaps = 20/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N + D D+ + D +V
Sbjct: 1 MQVSDFHFELPDELIARYPKAERTASRLLQLDGNSG---QLVDGTFKDVLELVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + ++ + R SK K G L+
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D A + + + + + + + ++ +G +PLPPYI RP + D Y
Sbjct: 113 D---EFHAVMQARHDA--LFEIRFTAETVVLDILNQIGHMPLPPYI--DRPDEETDKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G+++ +VTLHVGAGTF PV+VE+ DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDQALLEQIQAKGVELAYVTLHVGAGTFQPVRVENIHDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT----TEDGIINPWSGFTNIF 296
H+E + A+ + K+RG R+V+VGTTS+R LE+A + + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAITATKARG-RVVAVGTTSVRSLESAAQDALQKGTELKPFFGDTEIF 284
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+++ VD L++NFHLP+STL+MLVSAF G E T Y+HA+ YRF+SYGD +
Sbjct: 285 IFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYEHTMAAYEHAVKEQYRFFSYGDAMFI 344
Query: 357 FQK 359
++
Sbjct: 345 RKQ 347
>gi|170025482|ref|YP_001721987.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pseudotuberculosis YPIII]
gi|238688412|sp|B1JIF0|QUEA_YERPY RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|169752016|gb|ACA69534.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Yersinia
pseudotuberculosis YPIII]
Length = 356
Score = 449 bits (1155), Expect = e-124, Method: Composition-based stats.
Identities = 141/360 (39%), Positives = 208/360 (57%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP + IA P R RL+ + ++ + +DL L D +V
Sbjct: 1 MRVADFSFELPEALIAHYPQPQRSGCRLLSLDGPTGT---LTHGIFTDLLDKLAPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + + SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKLEVLVERVLDDHRVLAHVKASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT++ + +T + + ++ ++ VG +PLPPYI RP + D Y
Sbjct: 113 E---NIRATMLARHDT--LFELRFDDERDVFTILNAVGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF +L+ L GI++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSQRPGAVAAPTAGLHFDEPMLATLQEKGIEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+V+VGTTS+R LE+A E+G+I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLACKARGKRVVAVGTTSVRSLESAAKAAENGLIAPFFGDTRIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ VD L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD + +
Sbjct: 286 PGYHYQVVDALVTNFHLPESTLIMLVSAFAGYKNTMNAYQQAVAEQYRFFSYGDAMFISR 345
>gi|293390413|ref|ZP_06634747.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Aggregatibacter actinomycetemcomitans D7S-1]
gi|290950947|gb|EFE01066.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Aggregatibacter actinomycetemcomitans D7S-1]
Length = 363
Score = 449 bits (1155), Expect = e-124, Method: Composition-based stats.
Identities = 134/363 (36%), Positives = 196/363 (53%), Gaps = 17/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + I +D+ +N D ++
Sbjct: 1 MRVADFYFDLPDELIARYPKTERTASRLLQLDGENG---EIFHRTFADVLELINPGDLMI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + +S + + + R SK K+G L
Sbjct: 58 FNNTRVIPARMFGRKSS-----GGKIEVLVERVLSESRFLAHVRASKAPKEGTELILGED 112
Query: 121 DGQSRLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ G + + + L + +G +PLPPYI RP + D
Sbjct: 113 KLGEGHGVNAVMVGRQGSLFEIEITEKQTALFDVLQKIGHMPLPPYI--DRPDEEADQER 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y K+ G+VAAPTAGLHF LL++L + G+ FVTLHVGAGTF PV+VE+ +DH+
Sbjct: 171 YQTVYNKVPGAVAAPTAGLHFDDELLAKLNAKGVNFAFVTLHVGAGTFQPVRVENIEDHV 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT------TEDGIINPWSGFT 293
MH+E + A+ + + G R+++VGTTS+R +E+A +I P+ T
Sbjct: 231 MHAEYVEVPQEVCDAILATQKAGKRVIAVGTTSVRSIESAALAAEQKKSAVLIEPYFSDT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG FR VD L++NFHLP+STL+MLVSAF G T Y+ A+ + YRF+SYGD
Sbjct: 291 SIFIYPGKSFRVVDCLITNFHLPESTLIMLVSAFAGFSHTMNAYKSAVENRYRFFSYGDA 350
Query: 354 SLL 356
+
Sbjct: 351 MFI 353
>gi|308185876|ref|YP_003930007.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase [Pantoea
vagans C9-1]
gi|308056386|gb|ADO08558.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase [Pantoea
vagans C9-1]
Length = 432
Score = 449 bits (1155), Expect = e-124, Method: Composition-based stats.
Identities = 138/359 (38%), Positives = 201/359 (55%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + +S + +D+ LN D +V
Sbjct: 77 MRVADFAFELPESLIAHYPQAQRSGCRLLSLDGPSGA---LSHGVFTDVLDKLNPGDLLV 133
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + R SK K G L
Sbjct: 134 FNNTRVIPARVFGRKAS-----GGKIEMLVERMLDDKRVLAHVRASKAPKPGAELLLGED 188
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ ++AT++ + + L + + ++ VG +PLPPYI RP + D
Sbjct: 189 E---SVKATMVARHDA---LFEIAFDDERAVLDILNSVGHMPLPPYI--DRPDEEADREL 240
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y+ G+VAAPTAGLHF LL L GI++ FVTLHVGAGTF PV+VE ++H
Sbjct: 241 YQTVYSARPGAVAAPTAGLHFDEPLLQALKEKGIEMAFVTLHVGAGTFQPVRVETIEEHH 300
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFI 297
MH+E + A+ + K+RG ++V+VGTTS+R LE+A ++D +I P+ T IFI
Sbjct: 301 MHAEYAEVPQEVVDAVLACKARGNKVVAVGTTSVRSLESAAKASQDALIAPFFDDTQIFI 360
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY ++ +D L++NFHLP+STL+MLVSAF G + T Y A++ YRF+SYGD +
Sbjct: 361 YPGYEYQVIDALITNFHLPESTLIMLVSAFAGYQHTMAAYHAAVAEQYRFFSYGDAMFI 419
>gi|17229290|ref|NP_485838.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Nostoc sp.
PCC 7120]
gi|21263876|sp|Q8YW18|QUEA_ANASP RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|17130888|dbj|BAB73497.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Nostoc sp.
PCC 7120]
Length = 397
Score = 449 bits (1155), Expect = e-124, Method: Composition-based stats.
Identities = 150/375 (40%), Positives = 202/375 (53%), Gaps = 28/375 (7%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNL-SCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +D+ LPP RIA P PRDS+RL+VV+ + DLP L D ++
Sbjct: 27 LAGYDYVLPPERIAQNPAVPRDSSRLLVVNSQTTGKETPPLHQIFRDLPDILRPGDLLIM 86
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNTKVI A+L G + E+ L N W +P K KKG + F
Sbjct: 87 NNTKVIPARLYGRKSS-----GAEVEILLLEERKFNCWLALVKPGKRFKKGTQIIFEGLG 141
Query: 122 GQS---------------RLEATVI--DKWNTGEILLVFSISGIELERQISLVGTIPLPP 164
++ +L ATV+ DK G +L G L + + G IPLPP
Sbjct: 142 MRNLGIENSPQYSVASPHQLTATVLETDKATGGRLLQFDLPEGQSLVQLLDKFGEIPLPP 201
Query: 165 YIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
YI + D + YQT YA+ G++AAPTAGLHFT LL +L I F+TLHVG
Sbjct: 202 YITTSQAADEQ----YQTVYAEEPGAIAAPTAGLHFTPELLQKLRDRNINQAFITLHVGV 257
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDG 284
GTF PV+VED H MH E + A T + + K+ GGRI++VGTT +R LE A G
Sbjct: 258 GTFRPVEVEDVATHQMHEEWIEVPAATVAQIKATKAAGGRIIAVGTTVVRALEGAAAS-G 316
Query: 285 IINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHA 344
+ + G TN+FI PGY+++ V+ L++NFHLP+S+LLMLVSA G E +YQ AI+
Sbjct: 317 NLQEFCGKTNLFIYPGYKWQVVEGLITNFHLPRSSLLMLVSALIGRERLLNIYQEAIASQ 376
Query: 345 YRFYSYGDTSLLFQK 359
YRFYS+GD L+ +
Sbjct: 377 YRFYSFGDAMLILPE 391
>gi|283784223|ref|YP_003364088.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Citrobacter
rodentium ICC168]
gi|282947677|emb|CBG87232.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Citrobacter
rodentium ICC168]
Length = 356
Score = 449 bits (1155), Expect = e-124, Method: Composition-based stats.
Identities = 143/359 (39%), Positives = 203/359 (56%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R S RL+ + ++ +DL A LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSSCRLLSLDGPTGA---LTHGTFTDLLAKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SINATMTARH--GALFEVEFNDARPVLDILNAIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L GI++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLAALREKGIEMAFVTLHVGAGTFQPVRVDSIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A + +I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKSDLIEPFFGDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGYQYKVIDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEQKYRFFSYGDAMFIT 344
>gi|152987013|ref|YP_001346673.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
aeruginosa PA7]
gi|166216738|sp|A6V0T8|QUEA_PSEA7 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|150962171|gb|ABR84196.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
aeruginosa PA7]
Length = 347
Score = 449 bits (1155), Expect = e-124, Method: Composition-based stats.
Identities = 144/358 (40%), Positives = 202/358 (56%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP + IA P+ R ++RL+ + ++ +DL +L D +V
Sbjct: 1 MRVADFHFDLPEALIARHPLPERRASRLLALDGPTGS---LAHKQFADLLDYLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKES-----GGKLEVLVERVLDQHRVLAHVRASKAPKPGTRILV--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A ++ + + L + + L + VG +PLPPYI RP DA D Y
Sbjct: 110 --EGGGSAEMLQRHDA---LFELAFAEPVL-PLLERVGHMPLPPYI--DRPDDAADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL + + G+ FVTLHVGAGTF PV+VE +DH+M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDEALLEAIRAKGVDTAFVTLHVGAGTFQPVRVERIEDHVM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A+ + ++RGGR+V+VGTTS+R LE+A DG + P+SG T+IFI PG
Sbjct: 222 HREWLEVGQDVVDAVAACRARGGRVVAVGTTSVRSLESAAR-DGELKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y A+ YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAVEQGYRFFSYGDAMFITR 338
>gi|198245410|ref|YP_002214358.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|207855886|ref|YP_002242537.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
P125109]
gi|226713848|sp|B5FKQ9|QUEA_SALDC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|226713849|sp|B5QTF3|QUEA_SALEP RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|197939926|gb|ACH77259.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|206707689|emb|CAR31973.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Enteritidis str.
P125109]
gi|326622107|gb|EGE28452.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Dublin str. 3246]
Length = 354
Score = 449 bits (1155), Expect = e-124, Method: Composition-based stats.
Identities = 141/359 (39%), Positives = 202/359 (56%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLLSLEGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SIHATMTARH--GALFEVEFNDPRPVLDILNAIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L GI++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLAALREKGIEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFGDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGYQYKVIDALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQKYRFFSYGDAMFIT 344
>gi|262038069|ref|ZP_06011474.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Leptotrichia goodfellowii F0264]
gi|261747889|gb|EEY35323.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Leptotrichia goodfellowii F0264]
Length = 340
Score = 448 bits (1154), Expect = e-124, Method: Composition-based stats.
Identities = 143/357 (40%), Positives = 205/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EFDFDLP IA V PRD ++L+V++ I ++ +L +D +V
Sbjct: 1 MNIAEFDFDLPEELIAQHAVNPRDHSKLLVLNKEK---KEIEHKRFYNIIDYLKKDDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKVI A+L G + + C L R +W V +P+K +K G + F
Sbjct: 58 INRTKVIPARLYGRK-----DTGTVLECFLLKRYDLYTWEVLLKPAKRLKIGQKIVFS-- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
++ LEA +I+ + G +L F+ G E + +G +PLPPYI K D Y
Sbjct: 111 --ENMLEAELIEIKSDGNRVLKFNYKG-NFEEILDKLGEMPLPPYITEK----LEDKDRY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK SVAAPTAGLHFT LL ++ GI + V L VG GTF PV+ E+ +HIM
Sbjct: 164 QTVYAKEGESVAAPTAGLHFTEELLEKIKEKGIIIAEVFLDVGLGTFRPVQTENIHEHIM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ TA+ +N+ K +G R+++VGTTS+R LE++ E G + T+IFI
Sbjct: 224 HSEKYWVPKETAEIVNNAKRKGNRVIAVGTTSVRTLESSVNEKGELIENESETSIFIYGD 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ VD +++NFHLPKSTL+ML+SAF G E Y+ A+ YRFYS+GD+ ++
Sbjct: 284 YKFKIVDAIITNFHLPKSTLIMLISAFGGKEFVFSAYEEAVREKYRFYSFGDSMFIY 340
>gi|16759382|ref|NP_454999.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhi str. CT18]
gi|29142847|ref|NP_806189.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhi str. Ty2]
gi|213163212|ref|ZP_03348922.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
gi|213650157|ref|ZP_03380210.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhi str. J185]
gi|213854740|ref|ZP_03382980.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhi str. M223]
gi|289825047|ref|ZP_06544399.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhi str. E98-3139]
gi|21263879|sp|Q8Z8Y1|QUEA_SALTI RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|25318245|pir||AD0552 S-adenosylmethionine,tRNA ribosyltransferase-isomerase [imported] -
Salmonella enterica subsp. enterica serovar Typhi
(strain CT18)
gi|16501673|emb|CAD08860.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhi]
gi|29138479|gb|AAO70049.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhi str. Ty2]
Length = 354
Score = 448 bits (1154), Expect = e-124, Method: Composition-based stats.
Identities = 140/359 (38%), Positives = 201/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLLSLEGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SIHATMTARH--GALFEVEFNDPRPVLDILNAIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLAALREKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A + +I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKSDLIEPFFGDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGYQYKVIDALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQKYRFFSYGDAMFIT 344
>gi|309750338|gb|ADO80322.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queuosine
biosynthesis protein) [Haemophilus influenzae R2866]
Length = 363
Score = 448 bits (1154), Expect = e-124, Method: Composition-based stats.
Identities = 139/364 (38%), Positives = 203/364 (55%), Gaps = 17/364 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R S RL+ ++ IS SD+ ++ D ++
Sbjct: 1 MRVSDFNFDLPDELIARYPKIDRVSCRLLQLNGENG---EISHRTFSDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT VI A++ G + +I + + + + + R SK K+G L
Sbjct: 58 FNNTHVIPARMFGRKAS-----GGKIEVLVERMLDEHRFLAHIRSSKSPKEGTELFLGED 112
Query: 121 D-GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G++ V+ ++ + S L + +G +PLPPYI RP + D
Sbjct: 113 KLGENNGIKAVMKARHSSLFEVELSDKSTALLDVLQTIGHMPLPPYI--DRPDEEADQEC 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y+K+ G+VAAPTAGLHF NLL +L + G+ FVTLHVGAGTF PV+VE+ +DH+
Sbjct: 171 YQTVYSKVPGAVAAPTAGLHFDENLLEKLKAKGVNFEFVTLHVGAGTFQPVRVENIEDHV 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT------TEDGIINPWSGFT 293
MH+E + A+ + K G R+++VGTTS+R +E+A +I P+ T
Sbjct: 231 MHAEYVEVSQEVCNAIIATKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSDT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + T Y+ A+ + YRF+SYGD
Sbjct: 291 SIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKSAVENHYRFFSYGDA 350
Query: 354 SLLF 357
+
Sbjct: 351 MFIT 354
>gi|183601032|ref|ZP_02962525.1| hypothetical protein PROSTU_04653 [Providencia stuartii ATCC 25827]
gi|188019370|gb|EDU57410.1| hypothetical protein PROSTU_04653 [Providencia stuartii ATCC 25827]
Length = 356
Score = 448 bits (1154), Expect = e-124, Method: Composition-based stats.
Identities = 137/360 (38%), Positives = 208/360 (57%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R + RL+ + ++ + +D+ L+ D +V
Sbjct: 1 MRVSDFTFELPEELIAHYPQAQRSACRLLSLDGPTG---QLTHGIFTDILEKLSPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEMLVERMLDEHRVLAHIRASKAPKEGAELILGED 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT++ + G + V ++ ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SVNATMVARH--GALFEVQFDDQRDVLSILNEIGHMPLPPYI--DRPDEESDKELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL L G+++ FVTLHVGAGTF PV+V+ +DH+M
Sbjct: 166 QTVYSQRPGAVAAPTAGLHFDEPLLDALREKGVEMAFVTLHVGAGTFQPVRVDAIEDHVM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+V+VGTTS+R LE+A ++D +I P+ T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLACKARGNRVVAVGTTSVRSLESAAKASQDALIAPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ ++ VD L++NFHLP+STL+MLVSAF G + T + Y+ A++ YRF+SYGD + +
Sbjct: 286 PGFEYQVVDALITNFHLPESTLIMLVSAFAGYQNTMQAYKEAVAQKYRFFSYGDAMYITR 345
>gi|240139823|ref|YP_002964300.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein queA) [Methylobacterium extorquens
AM1]
gi|240009797|gb|ACS41023.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein queA) [Methylobacterium extorquens
AM1]
Length = 368
Score = 448 bits (1154), Expect = e-124, Method: Composition-based stats.
Identities = 196/364 (53%), Positives = 255/364 (70%), Gaps = 10/364 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP + IALRP PRD++RL+VV P ++D V DLPA L+ DA+V
Sbjct: 1 MRVDLFDFELPEAAIALRPASPRDASRLLVVRPG----DPLADRGVRDLPALLSPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L+G+R + LH+R +P+ W +ARP+K + GD + F S+
Sbjct: 57 FNDTRVIPARLSGIRHRAGG-SGQRCEAMLHLREAPDRWRAFARPAKRLAPGDRIRFGSE 115
Query: 121 DGQ-----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
S L+ATV ++ GEILL F +SG L+ I+ +G +PLPPYIA KR DA+
Sbjct: 116 GASEVCALSGLDATVEERGEGGEILLRFDLSGPALDEAIAGLGALPLPPYIAGKRATDAQ 175
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D DYQT YA+ G+VAAPTAGLHF+ LL+ + + GI+ VTLHVGAGTF+PVK +DT
Sbjct: 176 DTTDYQTVYAREPGAVAAPTAGLHFSDALLAGIDAAGIERVHVTLHVGAGTFLPVKADDT 235
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
D H MH+EIG +DA TA LN+V++RG R+V+VGTT+LRLLE+A DG I P+SG T+I
Sbjct: 236 DAHRMHAEIGILDAATAARLNAVRARGNRVVAVGTTALRLLESAADPDGTIRPFSGATDI 295
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFRAVD L++NFHLP+STL MLVSAF G++ + Y HAI YRFYSYGD SL
Sbjct: 296 FITPGYRFRAVDALVTNFHLPRSTLFMLVSAFAGLDTMRAAYAHAIQSGYRFYSYGDASL 355
Query: 356 LFQK 359
LF +
Sbjct: 356 LFPE 359
>gi|215485486|ref|YP_002327917.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O127:H6 str. E2348/69]
gi|312964573|ref|ZP_07778829.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 2362-75]
gi|254764275|sp|B7UJM8|QUEA_ECO27 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|215263558|emb|CAS07888.1| S-adenosylmethionine: tRNA ribosyltransferase-isomerase
[Escherichia coli O127:H6 str. E2348/69]
gi|312290807|gb|EFR18684.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 2362-75]
gi|324010082|gb|EGB79301.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 57-2]
Length = 356
Score = 448 bits (1154), Expect = e-124, Method: Composition-based stats.
Identities = 141/359 (39%), Positives = 205/359 (57%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ R+ AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---RINATMTARH--GALFEVEFNDQRSVLDILNSIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFIT 344
>gi|301025763|ref|ZP_07189277.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 196-1]
gi|299879990|gb|EFI88201.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 196-1]
Length = 356
Score = 448 bits (1154), Expect = e-124, Method: Composition-based stats.
Identities = 141/359 (39%), Positives = 205/359 (57%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+I + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SINATMIARH--GALFEVEFNDERSVLDILNSIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFIT 344
>gi|295695631|ref|YP_003588869.1| S-adenosylmethionine/ tRNA-ribosyltransferase-isomerase [Bacillus
tusciae DSM 2912]
gi|295411233|gb|ADG05725.1| S-adenosylmethionine/ tRNA-ribosyltransferase-isomerase [Bacillus
tusciae DSM 2912]
Length = 346
Score = 448 bits (1154), Expect = e-124, Method: Composition-based stats.
Identities = 153/363 (42%), Positives = 212/363 (58%), Gaps = 22/363 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FD+DLPP RIA P R ++RL+V++ + + DL + DA++
Sbjct: 1 MRVEDFDYDLPPDRIAQVPSADRTASRLLVLYRDSG---RMEHRHFRDLVDYAVPGDALI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP----NSWSVYARPSKVIKKGDILH 116
N+T+VI A+L GV+ ++ C L R P + W V +P + + G L
Sbjct: 58 LNDTRVIPARLLGVKAGG----GGQVECLLLRRDDPEQDPDLWRVLVKPGRRVHPGHRLV 113
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
F G LEA V+D G L+ F +G + E + +G +PLPPYI +R D
Sbjct: 114 F----GDGALEAEVLDTTEEGGRLVRFRYTG-DWEDLLKRLGEMPLPPYIKERRA----D 164
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YA++ GSVAAPTAGLHFT LL +L G++V +TLHVG GTF PV+V +
Sbjct: 165 SGRYQTVYARVPGSVAAPTAGLHFTEELLEQLRDRGMEVGTITLHVGLGTFRPVQVARVE 224
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+H MH+E I + TA+ ++ V+ RGGRI +VGTT R LE+A P G+T++F
Sbjct: 225 EHHMHAEYFRIPSETAELVSRVRERGGRIWAVGTTVCRALESAALRG--WGPREGWTDLF 282
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PG+ FR VD L++NFHLPKSTLLMLVSA G E+ YQ AI YRF+S+GD L+
Sbjct: 283 IYPGFSFRVVDRLITNFHLPKSTLLMLVSALAGREQILGAYQEAIEKGYRFFSFGDAMLI 342
Query: 357 FQK 359
+
Sbjct: 343 TTE 345
>gi|222032200|emb|CAP74939.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli LF82]
gi|312944982|gb|ADR25809.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O83:H1 str. NRG 857C]
Length = 356
Score = 448 bits (1154), Expect = e-124, Method: Composition-based stats.
Identities = 140/359 (38%), Positives = 204/359 (56%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGCKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SINATMTARH--GALFEVEFNDQRSVLDILNSIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFIT 344
>gi|83590531|ref|YP_430540.1| S-adenosylmethionine [Moorella thermoacetica ATCC 39073]
gi|123524237|sp|Q2RHU2|QUEA_MOOTA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|83573445|gb|ABC19997.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Moorella
thermoacetica ATCC 39073]
Length = 342
Score = 448 bits (1154), Expect = e-124, Method: Composition-based stats.
Identities = 156/357 (43%), Positives = 214/357 (59%), Gaps = 15/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EFD++LPP +IA +PV PRD++RL+V+H + DLP +L+ D +V
Sbjct: 1 MRIEEFDYELPPGQIAQQPVEPRDASRLLVLHREGG---FLEHRHFYDLPRYLHPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKVI A+L G R +I L R ++W RP + + G L F
Sbjct: 58 VNETKVIPARLWGYRA----GTGAKIEVLLLTRQEGDTWETLVRPGRRVPVGAELIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L+A V G ++ FS E + +G +PLPPYI K D Y
Sbjct: 111 -GRGELQARVKGVTPAGGRIMEFSYQEGPWEALLERLGEMPLPPYIKEK----PADPGRY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +GS AAPTAGLHFT LL L GI++ + LHVG GTF PVKVE+ +H+M
Sbjct: 166 QTVYAREEGSAAAPTAGLHFTPRLLKELREQGIEIASILLHVGLGTFRPVKVENIQEHVM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + A +N+ ++RG R+V+VGTT +R LET T DG+I+ SG+T+IFI PG
Sbjct: 226 HAEYYAVTPAAAATINAARARGHRVVAVGTTVVRTLETVATADGVIHAGSGWTDIFIYPG 285
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YRF+A+D L++NFHLP+STLLMLVSAF G E+ Y+ A+ YRFYS+GD L+
Sbjct: 286 YRFKAIDSLITNFHLPRSTLLMLVSAFAGREKILDAYRVAVREGYRFYSFGDAMLIL 342
>gi|163749711|ref|ZP_02156957.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
benthica KT99]
gi|161330524|gb|EDQ01482.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
benthica KT99]
Length = 345
Score = 448 bits (1154), Expect = e-124, Method: Composition-based stats.
Identities = 134/360 (37%), Positives = 199/360 (55%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V ++ F+LP IA P R ++RL+ + N ++D +D+ +N D +V
Sbjct: 1 MRVSDYSFELPDELIARYPTAERTASRLLSLDGNTG---QVTDKRFTDILNMVNPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + + ++ + + S + R SK K I+
Sbjct: 58 FNNTRVIPARLFGKK-----QTGGKLELLVERMLDDKSILAHVRCSKSPKVDSIICL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
E ++ + + + + +S + + VG +PLPPYI RP + D Y
Sbjct: 110 --DGGYEMIMLARHDA--LFELKLLSDKTILEVLEDVGHMPLPPYI--DRPDEDADKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y K G+VAAPTAGLHF + +L L G+ FVTLHVGAGTF PVKV++ +H M
Sbjct: 164 QTVYNKTPGAVAAPTAGLHFDNAMLKALADKGVDAAFVTLHVGAGTFQPVKVDNILEHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFITP 299
HSE + + K+ G R+++VGTTS+R LE+A + + T+IFI P
Sbjct: 224 HSEWAEVTQEVVDKVRQTKANGKRVIAVGTTSVRSLESAAKASSAELEAFCSDTDIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY F+ VD +++NFHLP+STL+ML+SAF G +E K Y+HAI+ YRF+SYGD + +K
Sbjct: 284 GYEFQVVDAMVTNFHLPESTLIMLLSAFAGFDEVKNAYRHAIAQKYRFFSYGDAMFVTKK 343
>gi|145637221|ref|ZP_01792883.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae PittHH]
gi|145269666|gb|EDK09607.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae PittHH]
Length = 363
Score = 448 bits (1154), Expect = e-124, Method: Composition-based stats.
Identities = 137/365 (37%), Positives = 202/365 (55%), Gaps = 17/365 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R S RL+ ++ I SD+ ++ D ++
Sbjct: 1 MRVSDFNFDLPDELIARYPKTDRVSCRLLQLNGENG---EIFHRTFSDVLDLIDQGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKIEVLVERMLDEHRFLAHIRSSKSPKEGAELFLGED 112
Query: 121 D-GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G++ V+ ++ + S L + +G +PLPPYI RP + D
Sbjct: 113 KLGENNGIKAVMKARHSSLFEVELSDKSTALLDVLQTIGHMPLPPYI--DRPDEEADKEC 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y+K+ G+VAAPTAGLHF NLL +L + G+ FVTLHVGAGTF PV+VE+ +DH+
Sbjct: 171 YQTVYSKVPGAVAAPTAGLHFDKNLLEKLKAKGVNFEFVTLHVGAGTFQPVRVENIEDHV 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT------TEDGIINPWSGFT 293
MH+E + A+ + K G R+++VGTTS+R +E+A +I P+ T
Sbjct: 231 MHAEYVEVSQEVCNAIIATKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSDT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + T Y+ A+ Y F+SYGD
Sbjct: 291 SIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKQAVQEKYCFFSYGDA 350
Query: 354 SLLFQ 358
+ +
Sbjct: 351 MFINK 355
>gi|78044043|ref|YP_360348.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Carboxydothermus hydrogenoformans Z-2901]
gi|91207417|sp|Q3ABY6|QUEA_CARHZ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|77996158|gb|ABB15057.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Carboxydothermus hydrogenoformans Z-2901]
Length = 338
Score = 448 bits (1154), Expect = e-124, Method: Composition-based stats.
Identities = 142/357 (39%), Positives = 203/357 (56%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +K+FD+ LP IA P+ RD +RL+V+ I+ + +L +L D +V
Sbjct: 1 MKLKDFDYYLPEELIAQTPLEKRDESRLLVLKRQTG---EITHDVFKNLKKYLVPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N T+VI A+L GVR + E+ L R++ W V +P + + G L F
Sbjct: 58 VNKTRVIPARLFGVRE-----QGGEVEILLVKRMNFREWEVLVKPGRRARVGTRLIFAP- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
LE ++ + G ++ FS G+ E ++ +G PLPPYI K +D Y
Sbjct: 112 ---GVLEGEIVAQTEVG-RIIKFSFQGV-FEEILNQLGQTPLPPYIKEK----LKDPERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT L+S L G++ V LHVG GTF PVK E+ +H M
Sbjct: 163 QTIYAKEPGSAAAPTAGLHFTRELISELKDYGVEFAEVLLHVGLGTFKPVKTENILEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I+ A+ +N K G R+++VGTT +R+LE+ + G + P G+T++FI PG
Sbjct: 223 HEEYYEIENEAAEKVNKAKREGRRVIAVGTTVVRVLESVADK-GQVAPAKGYTDLFIYPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+ +D L++NFHLPKSTLLMLVSAF G E+ Y+ A+ YRF+S+GD L+
Sbjct: 282 FNFQIIDGLITNFHLPKSTLLMLVSAFAGREKVLNAYEIAVRLRYRFFSFGDAMLII 338
>gi|296387660|ref|ZP_06877135.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
aeruginosa PAb1]
Length = 347
Score = 448 bits (1154), Expect = e-124, Method: Composition-based stats.
Identities = 144/358 (40%), Positives = 204/358 (56%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP + IA P+ R ++RL+ + ++ +DL +L D +V
Sbjct: 1 MRVADFHFDLPEALIARHPLPERRASRLLALDGPTGT---LAHRQFADLLDYLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKES-----GGKLEVLVERVLDQHRVLAHIRASKAPKPGTRILV--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A ++ + + L + + L + VG +PLPPYI RP DA D Y
Sbjct: 110 --EGGGSAEMLQRHDA---LFELAFAEPVL-PLLERVGHMPLPPYI--DRPDDAADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL + + G+ FVTLHVGAGTF PV+VE +DH+M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDEALLEAIRAKGVDTAFVTLHVGAGTFQPVRVERIEDHVM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A+++ ++RGGR+V+VGTTS+R LE+A DG + P+SG T+IFI PG
Sbjct: 222 HREWLEVGQDVVDAVSACRARGGRVVAVGTTSVRSLESAAR-DGELKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y A++ YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYDAAVAQGYRFFSYGDAMFITR 338
>gi|309379474|emb|CBX21840.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 346
Score = 448 bits (1154), Expect = e-124, Method: Composition-based stats.
Identities = 153/360 (42%), Positives = 209/360 (58%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P++S + D + DLP ++ D +V
Sbjct: 1 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPDMS----LQDRVFGDLPDYVGEGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 109 --EGGIRAVMVGR--EGELFCLRFEGGETVYELLEQNGHLPLPPYI--ERAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+VE ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVEKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + T A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 223 HSEWFEVPSETVAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRF VD L++NFHLPKSTLLMLVSAF G+ + Y++A+ YRF+SYGD +L +
Sbjct: 283 YRFNVVDRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGDAMVLGRNE 342
>gi|262042426|ref|ZP_06015586.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Klebsiella
pneumoniae subsp. rhinoscleromatis ATCC 13884]
gi|259040201|gb|EEW41312.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Klebsiella
pneumoniae subsp. rhinoscleromatis ATCC 13884]
Length = 354
Score = 448 bits (1154), Expect = e-124, Method: Composition-based stats.
Identities = 138/359 (38%), Positives = 204/359 (56%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +D+ LN D +V
Sbjct: 1 MRVTDFAFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDILDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++AT++ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SIKATMLARH--GALFEVEFNDERPVLEILNGIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ ++H M
Sbjct: 166 QTVYGTRPGAVAAPTAGLHFDEPLLDKLRAKGVEMAFVTLHVGAGTFQPVRVDSIEEHTM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A +D +I P+ T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKDALIAPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D+L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGYQYQVIDVLVTNFHLPESTLIMLVSAFAGYQHTMNAYKVAVEQKYRFFSYGDAMFIT 344
>gi|146308536|ref|YP_001189001.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
mendocina ymp]
gi|166216740|sp|A4XY53|QUEA_PSEMY RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|145576737|gb|ABP86269.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Pseudomonas mendocina ymp]
Length = 347
Score = 448 bits (1154), Expect = e-124, Method: Composition-based stats.
Identities = 145/358 (40%), Positives = 199/358 (55%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP S IA P+ R ++RL+ + + +DL L D +V
Sbjct: 1 MRVADFHFDLPESLIARHPLAERRASRLLQLDGPSGA---LRHGQFTDLLEQLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + + + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGRLEVLVERVLDQHRVLAHVRSSKSPKPGSQILI--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ EA ++ + + L + L + VG +PLPPYI RP D D Y
Sbjct: 110 --EGGGEAEMVARHDA---LFELRFAEPVL-PLLERVGHMPLPPYI--DRPDDEADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL+ + + G++ FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAEKAGAVAAPTAGLHFDDELLAAIRAKGVETAFVTLHVGAGTFQPVRVERIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + ++RGGR+V+VGTTS+R LETA + P+SG T+IFI PG
Sbjct: 222 HSEWLEVSQEVVDAVAACRARGGRVVAVGTTSVRSLETAAQSS-ELKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y+ A+ YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYAETMAAYRAAVEQGYRFFSYGDAMFITR 338
>gi|146298270|ref|YP_001192861.1| queuosine biosynthesis protein [Flavobacterium johnsoniae UW101]
gi|189038522|sp|A5FMM5|QUEA_FLAJO RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|146152688|gb|ABQ03542.1| Queuosine biosynthesis protein [Flavobacterium johnsoniae UW101]
Length = 349
Score = 448 bits (1154), Expect = e-124, Method: Composition-based stats.
Identities = 138/361 (38%), Positives = 197/361 (54%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F+F+LP +A P RD +RLMV+ I + D+ + + D ++
Sbjct: 1 MKLSHFNFNLPKELLAEFPAENRDESRLMVIDRQK---NTIEHKMFKDVINYFDDGDVLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 LNNTKVFPARLYGNK----EKTGARIEVFLLRELNSEQRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D L A VID + L F G E +++ +G P+P YI R + D
Sbjct: 114 DDD---SLVAEVIDNTTSRGRTLRFLYDGSYEEFRNKLTELGETPIPKYINRD--VTPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ +LL +L G+ VTLHVG GTF PV+VED
Sbjct: 169 AERYQTIYAKEEGAVAAPTAGLHFSKHLLKKLEIKGVNFAEVTLHVGLGTFNPVEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I +N K++ RI +VGTTS+R +E++ + +NP+ G+TN F
Sbjct: 229 KHKMDSEELIITQEACDIVNEGKAKKKRICAVGTTSMRAIESSVSSANTLNPYEGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P + F + +++NFH PKSTLLM++SAFCG + KK Y+ AI Y+FYSYGD L+
Sbjct: 289 IFPPHDFSIANCMITNFHTPKSTLLMMISAFCGHDLMKKAYEEAIKEGYKFYSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 L 349
>gi|161504410|ref|YP_001571522.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. arizonae serovar 62:z4,z23:-- str.
RSK2980]
gi|189038876|sp|A9MM58|QUEA_SALAR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|160865757|gb|ABX22380.1| hypothetical protein SARI_02521 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 356
Score = 448 bits (1153), Expect = e-124, Method: Composition-based stats.
Identities = 142/359 (39%), Positives = 201/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLLSLEGPTGA---LTHGTFTDLLDKLNPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---NIHATMTARH--GALFEVEFNDERPVLDILNAIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L GI++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDKPLLAALREKGIEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A + +I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKSDLIEPFFGDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D L++NFHLP+STL+MLVSAF G E T Y+ A+ YRF+SYGD +
Sbjct: 286 PGYQYKVIDALVTNFHLPESTLIMLVSAFAGYEHTMNAYKAAVEQKYRFFSYGDAMFIT 344
>gi|254503766|ref|ZP_05115917.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Labrenzia
alexandrii DFL-11]
gi|222439837|gb|EEE46516.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Labrenzia
alexandrii DFL-11]
Length = 360
Score = 448 bits (1153), Expect = e-124, Method: Composition-based stats.
Identities = 195/358 (54%), Positives = 251/358 (70%), Gaps = 6/358 (1%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDF+L RIALRP PRD+AR++VV P +SD V DLPA L DA+V
Sbjct: 1 MRVDQFDFELSNERIALRPARPRDAARMLVVRP--GEIPELSDMGVRDLPALLEPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G R E IS TLH+R + + W + RP+K ++ D++ F +
Sbjct: 59 FNDTKVIPAQLEGKRVRG--DIEAGISVTLHLRSAADGWKAFVRPAKKLQVEDLVVF--E 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+RL ATV +K + GE+LL F SG +L+ I+ VG IPLPPYIA+KR D +D DY
Sbjct: 115 GNGARLTATVKEKSDGGEVLLAFDCSGPDLDVAIAQVGHIPLPPYIAQKRGEDEQDRQDY 174
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHFT LL+ + GI+++ VTLHVGAGTF+PVK +DTDDH M
Sbjct: 175 QTIFAEKDGAVAAPTAGLHFTPELLAAIKDRGIEMHRVTLHVGAGTFLPVKADDTDDHKM 234
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G + TA AL +VK+RG ++VS+GTTSLR+LE+A E G I P++ T+IFITPG
Sbjct: 235 HAEWGEVSEETAAALQAVKARGNKVVSIGTTSLRILESAAQETGTIVPFADETSIFITPG 294
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y+F+A+D LM+NFHLP+STL MLVSA G+E + YQHAI YRFYSYGD SLLF
Sbjct: 295 YKFKAIDALMTNFHLPRSTLFMLVSALSGLETMRAAYQHAIDTEYRFYSYGDASLLFP 352
>gi|126662382|ref|ZP_01733381.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Flavobacteria bacterium BAL38]
gi|126625761|gb|EAZ96450.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Flavobacteria bacterium BAL38]
Length = 349
Score = 448 bits (1153), Expect = e-124, Method: Composition-based stats.
Identities = 141/361 (39%), Positives = 198/361 (54%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F F+LP +A P RD +RLMVV+ I L D+ + + D +V
Sbjct: 1 MKLSHFQFNLPEELLAEFPTENRDESRLMVVNRKTGT---IEHKLFKDVIDYFDDGDVMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 LNNTKVFPARLYGNK----EKTGARIEVFLLRELNAEQRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D L A VID + L F G E ++ +G P+P YI R+ + D
Sbjct: 114 DDD---SLVAEVIDNTTSRGRTLRFLYDGSYEEFREKLVELGETPIPKYINRE--VTPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK++G+VAAPTAGLHF+ +LL RL G+ VTLHVG GTF PV+VED
Sbjct: 169 AERYQTIYAKVEGAVAAPTAGLHFSKHLLKRLEIKGVDFAEVTLHVGLGTFNPVEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I +N+ K++ ++ VGTT++R +E++ + +NP+ G+TN F
Sbjct: 229 KHKMDSEEMKISQEACDIINNAKTKKKKVCCVGTTAMRAMESSVSSQRTLNPFEGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F D +++NFH PKSTLLM++SAFCG + KK Y+ A+ YRFYSYGD L+
Sbjct: 289 IYPPYDFSLADAMITNFHTPKSTLLMMISAFCGHDLMKKAYEEAVKEKYRFYSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|218552968|ref|YP_002385881.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli IAI1]
gi|226736738|sp|B7M3P4|QUEA_ECO8A RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|218359736|emb|CAQ97277.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli IAI1]
Length = 356
Score = 448 bits (1153), Expect = e-124, Method: Composition-based stats.
Identities = 140/359 (38%), Positives = 204/359 (56%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SINATMTARH--GALFEVGFNDERSVLDILNSIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFIT 344
>gi|251793021|ref|YP_003007747.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Aggregatibacter aphrophilus NJ8700]
gi|247534414|gb|ACS97660.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Aggregatibacter aphrophilus NJ8700]
Length = 363
Score = 448 bits (1153), Expect = e-124, Method: Composition-based stats.
Identities = 136/368 (36%), Positives = 201/368 (54%), Gaps = 23/368 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R ++RL+ ++ I +D+ + D +V
Sbjct: 1 MRVADFNFDLPDELIARYPKPERTASRLLQLNGENG---EIFHRTFADVLDLIQPGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + +S + + + R SK K G L
Sbjct: 58 FNNTRVIPARMFGRKTS-----GGKLEVLVERVLSESRFLAHVRSSKAPKAGAELILGED 112
Query: 121 DGQSR--LEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
++A ++ + ++ L I+ L + +G +PLPPYI RP + D
Sbjct: 113 KLGEGNGVKAIMLGRQDS---LFEIEIAEKQTALFDVLQQIGHMPLPPYI--DRPDEEAD 167
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT Y K+ G+VAAPTAGLHF LL +L G+ FVTLHVGAGTF PV+VE+ +
Sbjct: 168 QERYQTVYNKVPGAVAAPTAGLHFDDELLEKLKEKGVNFAFVTLHVGAGTFQPVRVENIE 227
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT------TEDGIINPWS 290
DH+MH+E + A+ + K G R+++VGTTS+R +E+A +I P+
Sbjct: 228 DHVMHAEYVEVPQSVCDAILATKQAGKRVIAVGTTSVRSIESAALAAEEKQSAVLIEPYF 287
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
T+IFI PG FR VD L++NFHLP+STL+MLVSAF G T Y+ A+ + YRF+SY
Sbjct: 288 SDTSIFIYPGKTFRLVDCLITNFHLPESTLIMLVSAFAGFSHTMNAYKSAVENRYRFFSY 347
Query: 351 GDTSLLFQ 358
GD + +
Sbjct: 348 GDAMFINK 355
>gi|170021223|ref|YP_001726177.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli ATCC 8739]
gi|189038521|sp|B1J044|QUEA_ECOLC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|169756151|gb|ACA78850.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Escherichia coli ATCC 8739]
Length = 356
Score = 448 bits (1153), Expect = e-124, Method: Composition-based stats.
Identities = 140/359 (38%), Positives = 205/359 (57%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+++ ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLLLLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SINATMTARH--GALFEVEFNDERSVLDILNSIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFIT 344
>gi|170726109|ref|YP_001760135.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
woodyi ATCC 51908]
gi|238688701|sp|B1KNG3|QUEA_SHEWM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|169811456|gb|ACA86040.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Shewanella
woodyi ATCC 51908]
Length = 345
Score = 448 bits (1153), Expect = e-124, Method: Composition-based stats.
Identities = 140/360 (38%), Positives = 199/360 (55%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P+ R S+RL+ + N + D+ +D+ +N D +V
Sbjct: 1 MRVTDFSFELPDELIARYPMPERTSSRLLSLEGNSGK---LGDNQFTDILDMVNPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK K +
Sbjct: 58 FNNTRVIPARLFGQKE-----TGGKLEILVERMLDDKRILAHVRSSKSPKVNTKVCL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
E T++ + + + + + + VG +PLPPYI RP + D Y
Sbjct: 110 --DGGYEMTMLARHDA--LFELELNDEKTILEVLEKVGHMPLPPYI--DRPDEDADKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y G+VAAPTAGLHF LL+RL G+ FVTLHVGAGTF PVKV+D DH M
Sbjct: 164 QTVYNDAPGAVAAPTAGLHFDDALLNRLKEKGVDTAFVTLHVGAGTFQPVKVDDVLDHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFITP 299
HSE + + K+ GGR+++VGTTS+R LE+A + + P+ T+IFI P
Sbjct: 224 HSEWAEVSQEVVDKIAHTKAHGGRVIAVGTTSVRSLESAAKASEDELQPFCRDTDIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY F+ VD +++NFHLP+STL+ML+SAF G +E K YQHAI+ YRF+SYGD + +K
Sbjct: 284 GYEFKVVDAMVTNFHLPESTLIMLLSAFAGFDEVKNAYQHAIAQKYRFFSYGDAMFVTKK 343
>gi|237730380|ref|ZP_04560861.1| probably S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Citrobacter sp. 30_2]
gi|226905919|gb|EEH91837.1| probably S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Citrobacter sp. 30_2]
Length = 356
Score = 448 bits (1153), Expect = e-124, Method: Composition-based stats.
Identities = 141/359 (39%), Positives = 205/359 (57%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFTFELPESLIAHYPQAERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++AT++ + + + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SIKATMVARHDA--LFEVEFNDERSVLDILNAIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL++L GI++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDDPLLAKLRDKGIEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ G T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFGDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y A+ YRF+SYGD +
Sbjct: 286 PGYKYQVIDALVTNFHLPESTLIMLVSAFAGYKNTMHAYHEAVKAEYRFFSYGDAMFIT 344
>gi|315022264|gb|EFT35292.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Riemerella
anatipestifer RA-YM]
gi|325336609|gb|ADZ12883.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Riemerella anatipestifer RA-GD]
Length = 349
Score = 448 bits (1153), Expect = e-124, Method: Composition-based stats.
Identities = 140/361 (38%), Positives = 198/361 (54%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F+F+LPP +A P RD ARLMV++ I L D+ + + ND +
Sbjct: 1 MKTSDFNFNLPPELLAEHPSEHRDEARLMVLNRKNQT---IEHKLFKDVIDYFDENDLFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
FNNTKV A+L G + + +I L + ++ W V P++ I+ G+ L F
Sbjct: 58 FNNTKVFPARLFGNK----EKTGAKIEVFLLRELDKDTRVWDVLVDPARKIRIGNKLFF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D L A VID + L F G E ++ +G PLP YI KR ++ D
Sbjct: 113 --DEDESLVAEVIDNTTSRGRTLRFLYDGSYEEFRAKLKELGETPLPKYI--KREVEPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ +L+ RL GI VTLHVG GTF P++VED
Sbjct: 169 AERYQTIYAKKEGAVAAPTAGLHFSKHLMKRLEIKGINFAEVTLHVGLGTFNPIEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M E FID A +N RI +VGTT++R +ET+ + + ++ + G+TN F
Sbjct: 229 KHKMECEEAFIDQKNADIINKAIDEDRRICAVGTTTMRTIETSVSSNRKLSAYHGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F D +++NFH PKSTL+M+++AF G + Y+ A+ Y+FYSYGD L+
Sbjct: 289 IYPPYDFAVADSMITNFHTPKSTLIMMIAAFAGKDFVMHAYEEAVKEKYKFYSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 L 349
>gi|255066143|ref|ZP_05317998.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
sicca ATCC 29256]
gi|255049688|gb|EET45152.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
sicca ATCC 29256]
Length = 343
Score = 448 bits (1153), Expect = e-124, Method: Composition-based stats.
Identities = 151/360 (41%), Positives = 214/360 (59%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P+ + + D + DLP ++ + D +V
Sbjct: 1 MDISDFDFTLPDQLIAQHPPEVRGSSRLLVALPD----MPLQDRVFGDLPDYIEAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + +I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGEKES-----GGKIEALIERVLDNHTALAHIRSSKSPKPGTKLIF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++++ + E+ + + + G +PLPPYI R D D Y
Sbjct: 109 --EGDICAVMVERAD--ELFCLRFEGEQTVYELLEQNGHLPLPPYIERAAGAD--DDTRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL + G++ VTLHVGAGTF PV+V+ ++H M
Sbjct: 163 QTVYAKHQGAVAAPTAGLHFTDELLGRLKAKGVETAEVTLHVGAGTFQPVRVDKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + T A+ + +RG ++ +VGTTS+R LE+A E G + G T+IFITPG
Sbjct: 223 HSEWFDVPPETVAAIEAAHARGNKVWAVGTTSMRALESAARETGRLKAGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRFR +D L++NFHLPKSTLLMLVSAF G+E + +Y+HA+ H YRF+SYGD +L +
Sbjct: 283 YRFRVIDRLITNFHLPKSTLLMLVSAFSGMEHIRAVYRHAVEHEYRFFSYGDAMVLGRSE 342
>gi|218549935|ref|YP_002383726.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
fergusonii ATCC 35469]
gi|226736741|sp|B7LMI2|QUEA_ESCF3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|218357476|emb|CAQ90115.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
fergusonii ATCC 35469]
gi|324114624|gb|EGC08592.1| tRNA ribosyltransferase-isomerase [Escherichia fergusonii B253]
Length = 356
Score = 448 bits (1153), Expect = e-124, Method: Composition-based stats.
Identities = 140/359 (38%), Positives = 204/359 (56%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SINATMTARH--GALFEVEFNDDRSVLDILNSIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLATKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFIT 344
>gi|170743609|ref|YP_001772264.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Methylobacterium sp. 4-46]
gi|238688051|sp|B0U9V5|QUEA_METS4 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|168197883|gb|ACA19830.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Methylobacterium sp. 4-46]
Length = 362
Score = 448 bits (1153), Expect = e-124, Method: Composition-based stats.
Identities = 193/365 (52%), Positives = 246/365 (67%), Gaps = 10/365 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP + IALRPV PRD+ARL+ V P +++ V DLPA L D +V
Sbjct: 1 MRVDLFDFDLPEALIALRPVEPRDAARLLRVAPG----HPLAEARVRDLPALLRPGDCLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G+R + LH R P+ W +ARP K +++GD + F S
Sbjct: 57 FNDTRVIPARLRGLRARPDGSS-VRVEAMLHRREGPDCWRAFARPGKRLREGDRIRFGSG 115
Query: 121 DGQ-----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
L+ATV + GEI L F ++G L+ ++ +G +PLPPYIA +RP DAR
Sbjct: 116 RDGSACDLGHLDATVAARGEEGEITLAFDLAGAFLDEAVARLGELPLPPYIAGRRPADAR 175
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D DYQT YA+ G+VAAPTAGLHFT +LL+RL + GI +TLHVGAGTF+PVK +DT
Sbjct: 176 DAADYQTVYAREPGAVAAPTAGLHFTPDLLARLGAAGIGEARLTLHVGAGTFLPVKAQDT 235
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+ H MH+E G I TA LN ++ GGRIV+VGTTSLRLLE+A DG I P++G T+I
Sbjct: 236 EAHRMHAETGEITPGTAARLNRARAEGGRIVAVGTTSLRLLESAAEPDGTIRPFAGATDI 295
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFRAVD+LM+NFHLP+STL MLVSAF G+E + Y HA++ YRFYSYGD SL
Sbjct: 296 FITPGYRFRAVDVLMTNFHLPRSTLFMLVSAFAGLETMRAAYAHAVAQGYRFYSYGDASL 355
Query: 356 LFQKR 360
LF+
Sbjct: 356 LFRAE 360
>gi|194432534|ref|ZP_03064820.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
dysenteriae 1012]
gi|194419095|gb|EDX35178.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
dysenteriae 1012]
gi|320181613|gb|EFW56528.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
boydii ATCC 9905]
gi|332085662|gb|EGI90826.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
dysenteriae 155-74]
gi|332094555|gb|EGI99601.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
boydii 5216-82]
Length = 356
Score = 448 bits (1153), Expect = e-124, Method: Composition-based stats.
Identities = 139/359 (38%), Positives = 204/359 (56%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SINATMTARH--GALFEVEFNDDRSVLDILNSIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGFQYKVIDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFIT 344
>gi|170682221|ref|YP_001742540.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli SMS-3-5]
gi|191166706|ref|ZP_03028533.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli B7A]
gi|193065228|ref|ZP_03046301.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli E22]
gi|194428822|ref|ZP_03061357.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli B171]
gi|218693866|ref|YP_002401533.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 55989]
gi|218698690|ref|YP_002406319.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli IAI39]
gi|218703687|ref|YP_002411206.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli UMN026]
gi|260842603|ref|YP_003220381.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O103:H2 str. 12009]
gi|293403524|ref|ZP_06647615.1| queA [Escherichia coli FVEC1412]
gi|293408551|ref|ZP_06652390.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli B354]
gi|298379136|ref|ZP_06989017.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli FVEC1302]
gi|300818272|ref|ZP_07098483.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 107-1]
gi|300900471|ref|ZP_07118638.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 198-1]
gi|300903331|ref|ZP_07121259.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 84-1]
gi|300936392|ref|ZP_07151320.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 21-1]
gi|301025430|ref|ZP_07188981.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 69-1]
gi|301301552|ref|ZP_07207687.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 124-1]
gi|309794871|ref|ZP_07689292.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 145-7]
gi|331651338|ref|ZP_08352363.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli M718]
gi|331661780|ref|ZP_08362703.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli TA143]
gi|331671953|ref|ZP_08372749.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli TA280]
gi|226736737|sp|B7NJ97|QUEA_ECO7I RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|226736739|sp|B7N8V7|QUEA_ECOLU RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|226736740|sp|B1LJF3|QUEA_ECOSM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|254764276|sp|B7L638|QUEA_ECO55 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|170519939|gb|ACB18117.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli SMS-3-5]
gi|190903217|gb|EDV62939.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli B7A]
gi|192927202|gb|EDV81823.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli E22]
gi|194413125|gb|EDX29412.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli B171]
gi|218350598|emb|CAU96288.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 55989]
gi|218368676|emb|CAR16416.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli IAI39]
gi|218430784|emb|CAR11658.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli UMN026]
gi|257757750|dbj|BAI29247.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O103:H2 str. 12009]
gi|284920212|emb|CBG33271.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 042]
gi|291429377|gb|EFF02397.1| queA [Escherichia coli FVEC1412]
gi|291471729|gb|EFF14212.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli B354]
gi|298280249|gb|EFI21753.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli FVEC1302]
gi|300355952|gb|EFJ71822.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 198-1]
gi|300396032|gb|EFJ79570.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 69-1]
gi|300404626|gb|EFJ88164.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 84-1]
gi|300458498|gb|EFK21991.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 21-1]
gi|300529163|gb|EFK50225.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 107-1]
gi|300843049|gb|EFK70809.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 124-1]
gi|308121524|gb|EFO58786.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 145-7]
gi|315256229|gb|EFU36197.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 85-1]
gi|320201646|gb|EFW76222.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli EC4100B]
gi|323160488|gb|EFZ46436.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli E128010]
gi|323965357|gb|EGB60815.1| tRNA ribosyltransferase-isomerase [Escherichia coli M863]
gi|327254723|gb|EGE66339.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli STEC_7v]
gi|331051079|gb|EGI23131.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli M718]
gi|331060202|gb|EGI32166.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli TA143]
gi|331070942|gb|EGI42301.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli TA280]
Length = 356
Score = 448 bits (1152), Expect = e-124, Method: Composition-based stats.
Identities = 140/359 (38%), Positives = 204/359 (56%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SINATMTARH--GALFEVEFNDDRSVLDILNSIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFIT 344
>gi|325498312|gb|EGC96171.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
fergusonii ECD227]
Length = 356
Score = 448 bits (1152), Expect = e-124, Method: Composition-based stats.
Identities = 140/359 (38%), Positives = 204/359 (56%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SINATMTARH--GALFEVEFNDERSVLDILNSIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLATKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFIT 344
>gi|163786383|ref|ZP_02180831.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queuosine
biosynthesis protein) [Flavobacteriales bacterium ALC-1]
gi|159878243|gb|EDP72299.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queuosine
biosynthesis protein) [Flavobacteriales bacterium ALC-1]
Length = 349
Score = 448 bits (1152), Expect = e-124, Method: Composition-based stats.
Identities = 139/361 (38%), Positives = 199/361 (55%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F FDLP +A P RD ARLMV++ I D+ + + D ++
Sbjct: 1 MKLSHFSFDLPEDLLAEHPSEHRDEARLMVLNREKQT---IEHKQFKDIIDYFDEGDVMI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + I L ++ + W V P++ I+ G+ L+F
Sbjct: 58 LNNTKVFPARLYGNK----EKTGARIEVFLLRELNQDQRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
+ L A VID + L F G + R+++ +G PLP YI KR ++ D
Sbjct: 114 EDE---TLVAEVIDNTTSRGRTLRFLYDGSYTDFRRKLTDLGETPLPKYI--KRDVEPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT +AK +G+VAAPTAGLHF+ +LL RL G+++ VTLHVG GTF PV+VED
Sbjct: 169 EERYQTIFAKNEGAVAAPTAGLHFSKHLLKRLEIKGVEMAEVTLHVGLGTFNPVEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I A +N R+ +VGTTS+R +E++ + +G +N + G+TN F
Sbjct: 229 KHKMDSEEIVITPRAADIVNKGIETKRRVCAVGTTSMRTIESSVSSNGRLNEFEGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH PKSTLLM+ SAF G + KK Y+ A+ Y+FYSYGD L+
Sbjct: 289 IFPPYDFSIANCMITNFHTPKSTLLMMTSAFAGHDFMKKAYEEAVKEKYKFYSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|307129892|ref|YP_003881908.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Dickeya
dadantii 3937]
gi|306527421|gb|ADM97351.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Dickeya
dadantii 3937]
Length = 355
Score = 448 bits (1152), Expect = e-124, Method: Composition-based stats.
Identities = 143/360 (39%), Positives = 207/360 (57%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ + +DL L D +V
Sbjct: 1 MRVADFSFELPESLIAHYPQAKRSGCRLLSLDGPTGA---LTHGVFTDLLDKLQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SKV K G L
Sbjct: 58 FNNTRVIPARLFGRKVS-----GGKLEVLVERMLDDKRVLAHVRASKVPKPGTELLLGED 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++AT++ + + + + ++ ++ +G +PLPPYI RP +A D Y
Sbjct: 113 E---SVKATMLARHDA--LFEIQFDDTRDVLTILNDIGHMPLPPYI--DRPDEAADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L G+++ FVTLHVGAGTF PV+VE +DHIM
Sbjct: 166 QTVYSQRPGAVAAPTAGLHFDEPLLAALKEKGVEMAFVTLHVGAGTFQPVRVESIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
H+E + A+ + K+RG R+++VGTTS+R LE+A + II P+ G T IFI
Sbjct: 226 HAEYTEVPQVVVDAVLACKARGNRVIAVGTTSVRSLESAAQASTGEIIAPFFGDTRIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGYR+R VD L++NFHLP+STL+MLVSAF G T YQ A++ YRF+SYGD + +
Sbjct: 286 PGYRYRVVDALVTNFHLPESTLIMLVSAFAGYRHTMTAYQQAVAEQYRFFSYGDAMFITR 345
>gi|331681798|ref|ZP_08382431.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli H299]
gi|331081000|gb|EGI52165.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli H299]
Length = 356
Score = 448 bits (1152), Expect = e-124, Method: Composition-based stats.
Identities = 140/359 (38%), Positives = 204/359 (56%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SINATMTARH--GALFEVEFNDDRSVLDILNSIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKSAVEEKYRFFSYGDAMFIT 344
>gi|114563868|ref|YP_751382.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Shewanella
frigidimarina NCIMB 400]
gi|122299212|sp|Q07ZM1|QUEA_SHEFN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|114335161|gb|ABI72543.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Shewanella
frigidimarina NCIMB 400]
Length = 346
Score = 448 bits (1152), Expect = e-124, Method: Composition-based stats.
Identities = 137/361 (37%), Positives = 205/361 (56%), Gaps = 19/361 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R+++RL+ + ++D +DL +N D +V
Sbjct: 1 MRVADFSFDLPDELIARYPTAQRNASRLLTL---SGENSELADKKFTDLFNLINPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK K ++
Sbjct: 58 FNNTRVIPARLFGQK-----STGGKLEILVERMLDDKRILAHVRSSKSPKVDTLIDL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DG +++ ++ + + + + S + + VG +PLPPYI RP + D Y
Sbjct: 110 DGGYQMK--MLARHDA--LFELELQSDKTILEVLEDVGHMPLPPYI--DRPDEDTDKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF +L+ L + G+ + FVTLHVGAGTF PV+V++ +H M
Sbjct: 164 QTVYNQTPGAVAAPTAGLHFDDAMLADLKAKGVNIAFVTLHVGAGTFQPVRVDNVLEHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI--INPWSGFTNIFIT 298
HSE + + K+ G R+V+VGTTS+R LE+A G + +SG T+IFI
Sbjct: 224 HSEWANVSQEVVDLIAQTKAAGNRVVAVGTTSVRSLESAARASGDSPLEAFSGDTDIFIY 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG++F+ VD +++NFHLP+STL+ML+SAF G E K YQHAI+ YRF+SYGD + +
Sbjct: 284 PGFQFKVVDAMVTNFHLPESTLIMLLSAFAGYEAVMKAYQHAITQKYRFFSYGDAMFVTK 343
Query: 359 K 359
K
Sbjct: 344 K 344
>gi|110640666|ref|YP_668394.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 536]
gi|191173478|ref|ZP_03035005.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli F11]
gi|300997408|ref|ZP_07181748.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 200-1]
gi|306813129|ref|ZP_07447322.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli NC101]
gi|331645578|ref|ZP_08346682.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli M605]
gi|123344315|sp|Q0TKN6|QUEA_ECOL5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|110342258|gb|ABG68495.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 536]
gi|190906187|gb|EDV65799.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli F11]
gi|281177575|dbj|BAI53905.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli SE15]
gi|300304227|gb|EFJ58747.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 200-1]
gi|305853892|gb|EFM54331.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli NC101]
gi|315299571|gb|EFU58819.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 16-3]
gi|320197159|gb|EFW71776.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli WV_060327]
gi|323191323|gb|EFZ76586.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli RN587/1]
gi|324010665|gb|EGB79884.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 60-1]
gi|330910199|gb|EGH38709.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli AA86]
gi|331045740|gb|EGI17866.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli M605]
Length = 356
Score = 448 bits (1152), Expect = e-124, Method: Composition-based stats.
Identities = 140/359 (38%), Positives = 204/359 (56%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SINATMTARH--GALFEVEFNDQRSVLDILNSIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFIT 344
>gi|15800132|ref|NP_286144.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 EDL933]
gi|15829710|ref|NP_308483.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. Sakai]
gi|16128390|ref|NP_414939.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli str. K-12 substr. MG1655]
gi|24111783|ref|NP_706293.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
flexneri 2a str. 301]
gi|30061900|ref|NP_836071.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
flexneri 2a str. 2457T]
gi|74310974|ref|YP_309393.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
sonnei Ss046]
gi|82775690|ref|YP_402037.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
dysenteriae Sd197]
gi|89107275|ref|AP_001055.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli str. K-12 substr. W3110]
gi|110804427|ref|YP_687947.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
flexneri 5 str. 8401]
gi|157154716|ref|YP_001461586.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli E24377A]
gi|157159925|ref|YP_001457243.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli HS]
gi|168749861|ref|ZP_02774883.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4113]
gi|168756941|ref|ZP_02781948.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4401]
gi|168761605|ref|ZP_02786612.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4501]
gi|168768350|ref|ZP_02793357.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4486]
gi|168776295|ref|ZP_02801302.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4196]
gi|168783265|ref|ZP_02808272.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4076]
gi|168786246|ref|ZP_02811253.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC869]
gi|168800282|ref|ZP_02825289.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC508]
gi|170079991|ref|YP_001729311.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli str. K-12 substr. DH10B]
gi|170767690|ref|ZP_02902143.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
albertii TW07627]
gi|188494964|ref|ZP_03002234.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 53638]
gi|194438913|ref|ZP_03070998.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 101-1]
gi|195938532|ref|ZP_03083914.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4024]
gi|208808051|ref|ZP_03250388.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4206]
gi|208815990|ref|ZP_03257169.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4045]
gi|208823080|ref|ZP_03263398.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4042]
gi|209400296|ref|YP_002269047.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4115]
gi|209917617|ref|YP_002291701.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli SE11]
gi|217324431|ref|ZP_03440515.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. TW14588]
gi|238899693|ref|YP_002925489.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli BW2952]
gi|253774610|ref|YP_003037441.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 'BL21-Gold(DE3)pLysS AG']
gi|254160471|ref|YP_003043579.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli B str. REL606]
gi|254791586|ref|YP_003076423.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. TW14359]
gi|256020372|ref|ZP_05434237.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
sp. D9]
gi|256023978|ref|ZP_05437843.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
sp. 4_1_40B]
gi|260853625|ref|YP_003227516.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O26:H11 str. 11368]
gi|261223882|ref|ZP_05938163.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. FRIK2000]
gi|261256404|ref|ZP_05948937.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. FRIK966]
gi|291281309|ref|YP_003498127.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O55:H7 str. CB9615]
gi|293413659|ref|ZP_06656308.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli B185]
gi|300820357|ref|ZP_07100509.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 119-7]
gi|300918216|ref|ZP_07134822.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 115-1]
gi|300924124|ref|ZP_07140116.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 182-1]
gi|300930301|ref|ZP_07145714.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 187-1]
gi|300947945|ref|ZP_07162092.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 116-1]
gi|300957968|ref|ZP_07170134.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 175-1]
gi|301330735|ref|ZP_07223337.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 78-1]
gi|301647325|ref|ZP_07247138.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 146-1]
gi|307137047|ref|ZP_07496403.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli H736]
gi|307312220|ref|ZP_07591856.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Escherichia
coli W]
gi|309786992|ref|ZP_07681604.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
dysenteriae 1617]
gi|312970499|ref|ZP_07784680.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 1827-70]
gi|331640921|ref|ZP_08342056.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli H736]
gi|331666754|ref|ZP_08367628.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli TA271]
gi|331676072|ref|ZP_08376784.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli H591]
gi|67471968|sp|P0A7F9|QUEA_ECOLI RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|67471969|sp|P0A7G0|QUEA_ECO57 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|67471970|sp|P0A7G1|QUEA_SHIFL RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|91207403|sp|Q32JF9|QUEA_SHIDS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|91207404|sp|Q3Z504|QUEA_SHISS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|123048415|sp|Q0T7I4|QUEA_SHIF8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|167016404|sp|A7ZIF7|QUEA_ECO24 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|167016405|sp|A7ZX56|QUEA_ECOHS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|226713837|sp|B5Z2W1|QUEA_ECO5E RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|226713838|sp|B6HZK5|QUEA_ECOSE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|229598026|sp|B1XEZ3|QUEA_ECODH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|259551445|sp|C4ZTG2|QUEA_ECOBW RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|12513255|gb|AAG54752.1|AE005220_1 synthesis of queuine in tRNA; probably S-adenosylmethionine:tRNA
ribosyltransferase-isomerase [Escherichia coli O157:H7
str. EDL933]
gi|147485|gb|AAA16114.1| queuosine biosynthesis [Escherichia coli]
gi|1773089|gb|AAB40161.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli]
gi|1786606|gb|AAC73508.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli str. K-12 substr. MG1655]
gi|13359913|dbj|BAB33879.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Escherichia coli O157:H7 str. Sakai]
gi|24050570|gb|AAN42000.1| probable S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Shigella flexneri 2a str. 301]
gi|30040144|gb|AAP15877.1| probable S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Shigella flexneri 2a str. 2457T]
gi|73854451|gb|AAZ87158.1| synthesis of queuine in tRNA; probably S-adenosylmethionine:tRNA
ribosyltransferase-isomerase [Shigella sonnei Ss046]
gi|81239838|gb|ABB60548.1| probable S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Shigella dysenteriae Sd197]
gi|85674545|dbj|BAE76185.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli str. K12 substr. W3110]
gi|110613975|gb|ABF02642.1| probably S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Shigella flexneri 5 str. 8401]
gi|157065605|gb|ABV04860.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli HS]
gi|157076746|gb|ABV16454.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli E24377A]
gi|169887826|gb|ACB01533.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli str. K-12 substr. DH10B]
gi|170123178|gb|EDS92109.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
albertii TW07627]
gi|187768305|gb|EDU32149.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4196]
gi|188015855|gb|EDU53977.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4113]
gi|188490163|gb|EDU65266.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 53638]
gi|188999361|gb|EDU68347.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4076]
gi|189355981|gb|EDU74400.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4401]
gi|189362534|gb|EDU80953.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4486]
gi|189368104|gb|EDU86520.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4501]
gi|189373513|gb|EDU91929.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC869]
gi|189377399|gb|EDU95815.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC508]
gi|194422207|gb|EDX38209.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 101-1]
gi|208727852|gb|EDZ77453.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4206]
gi|208732638|gb|EDZ81326.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4045]
gi|208737273|gb|EDZ84957.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4042]
gi|209161696|gb|ACI39129.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC4115]
gi|209744174|gb|ACI70394.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Escherichia coli]
gi|209744176|gb|ACI70395.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Escherichia coli]
gi|209744178|gb|ACI70396.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Escherichia coli]
gi|209744180|gb|ACI70397.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Escherichia coli]
gi|209744182|gb|ACI70398.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Escherichia coli]
gi|209910876|dbj|BAG75950.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli SE11]
gi|217320652|gb|EEC29076.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. TW14588]
gi|238863509|gb|ACR65507.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli BW2952]
gi|242376183|emb|CAQ30874.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli BL21(DE3)]
gi|253325654|gb|ACT30256.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Escherichia
coli 'BL21-Gold(DE3)pLysS AG']
gi|253972372|gb|ACT38043.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli B str. REL606]
gi|253976582|gb|ACT42252.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli BL21(DE3)]
gi|254590986|gb|ACT70347.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. TW14359]
gi|257752274|dbj|BAI23776.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O26:H11 str. 11368]
gi|260450408|gb|ACX40830.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Escherichia
coli DH1]
gi|281599737|gb|ADA72721.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
flexneri 2002017]
gi|290761182|gb|ADD55143.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O55:H7 str. CB9615]
gi|291433717|gb|EFF06690.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli B185]
gi|300315342|gb|EFJ65126.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 175-1]
gi|300414601|gb|EFJ97911.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 115-1]
gi|300419577|gb|EFK02888.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 182-1]
gi|300452497|gb|EFK16117.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 116-1]
gi|300461873|gb|EFK25366.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 187-1]
gi|300527142|gb|EFK48211.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 119-7]
gi|300843396|gb|EFK71156.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 78-1]
gi|301074521|gb|EFK89327.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 146-1]
gi|306907722|gb|EFN38224.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Escherichia
coli W]
gi|308924570|gb|EFP70065.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
dysenteriae 1617]
gi|309700667|emb|CBI99963.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli ETEC H10407]
gi|310337148|gb|EFQ02286.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 1827-70]
gi|313646978|gb|EFS11435.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
flexneri 2a str. 2457T]
gi|315059682|gb|ADT74009.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli W]
gi|315135087|dbj|BAJ42246.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli DH1]
gi|315616655|gb|EFU97272.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 3431]
gi|320192818|gb|EFW67458.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. EC1212]
gi|320638394|gb|EFX08108.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. G5101]
gi|320643774|gb|EFX12897.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H- str. 493-89]
gi|320649125|gb|EFX17703.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H- str. H 2687]
gi|320656018|gb|EFX23934.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O55:H7 str. 3256-97 TW 07815]
gi|320661168|gb|EFX28599.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O55:H7 str. USDA 5905]
gi|320665144|gb|EFX32237.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. LSU-61]
gi|323152127|gb|EFZ38420.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli EPECa14]
gi|323164196|gb|EFZ50003.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
sonnei 53G]
gi|323170486|gb|EFZ56136.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli LT-68]
gi|323184769|gb|EFZ70140.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 1357]
gi|323379752|gb|ADX52020.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Escherichia
coli KO11]
gi|323938590|gb|EGB34839.1| tRNA ribosyltransferase-isomerase [Escherichia coli E1520]
gi|323943211|gb|EGB39367.1| tRNA ribosyltransferase-isomerase [Escherichia coli E482]
gi|323945306|gb|EGB41362.1| tRNA ribosyltransferase-isomerase [Escherichia coli H120]
gi|323963391|gb|EGB58953.1| tRNA ribosyltransferase-isomerase [Escherichia coli H489]
gi|323972255|gb|EGB67465.1| tRNA ribosyltransferase-isomerase [Escherichia coli TA007]
gi|323976114|gb|EGB71207.1| tRNA ribosyltransferase-isomerase [Escherichia coli TW10509]
gi|324116889|gb|EGC10802.1| tRNA ribosyltransferase-isomerase [Escherichia coli E1167]
gi|326341165|gb|EGD64957.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. 1044]
gi|331037719|gb|EGI09939.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli H736]
gi|331065978|gb|EGI37862.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli TA271]
gi|331076130|gb|EGI47412.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli H591]
gi|332103903|gb|EGJ07249.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
sp. D9]
Length = 356
Score = 448 bits (1152), Expect = e-124, Method: Composition-based stats.
Identities = 140/359 (38%), Positives = 204/359 (56%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SINATMTARH--GALFEVEFNDERSVLDILNSIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFIT 344
>gi|297588493|ref|ZP_06947136.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Finegoldia
magna ATCC 53516]
gi|297573866|gb|EFH92587.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Finegoldia
magna ATCC 53516]
Length = 345
Score = 448 bits (1152), Expect = e-124, Method: Composition-based stats.
Identities = 145/357 (40%), Positives = 201/357 (56%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD++L IA P+ RD ++LMV+ + ++ +LN D +V
Sbjct: 1 MNTDDFDYELDEKFIAQTPLDKRDESKLMVMDRFNGNTEI---KKFYNIIDYLNPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G R +E++I L + W +P K +K ++ F
Sbjct: 58 CNNTRVIPARLFGHR----PGKEEKIEVLLLQQTEDK-WECLVKPGKKMKLDQVIEF--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
++ A V+D G +L F GI E ++ +G +PLPPYI K D Y
Sbjct: 110 --SDKVSAKVVDITEDGSRILKFDYEGI-FEERLDELGNMPLPPYIKEK----LNDKERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT+ LL ++ GI V F+TLHVG GTF PVKV+D DH M
Sbjct: 163 QTVYSKHKGSAAAPTAGLHFTNELLEKIKEKGIYVVFLTLHVGLGTFRPVKVDDVKDHHM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDG-IINPWSGFTNIFITP 299
HSE I T +N KS+G I++VGTTS+R LET T + + SG+T+IFI P
Sbjct: 223 HSEYYTISQETVDIINRQKSKGHNIIAVGTTSVRTLETVTHNNNSKLVAESGWTDIFIYP 282
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
G+ F VD L++NFHLPKSTL+MLVSAF E Y+ A + +RF+S+GD +
Sbjct: 283 GFEFNIVDSLITNFHLPKSTLMMLVSAFSKKEYIFDAYEKAKRNDFRFFSFGDAMFI 339
>gi|309388952|gb|ADO76832.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Halanaerobium praevalens DSM 2228]
Length = 347
Score = 448 bits (1152), Expect = e-124, Method: Composition-based stats.
Identities = 151/362 (41%), Positives = 214/362 (59%), Gaps = 19/362 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V+EF++ LP IA +P+ RD +RLMV++P +I +++ +L +L+ D I+
Sbjct: 1 MKVEEFNYQLPEELIAQKPLSKRDESRLMVLNPE---QQIIEENIFKNLKEYLDPGDMII 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN++VI A+L G + EI L +S W V RP + KKG + F
Sbjct: 58 MNNSRVIPARLYGAKI----PTGTEIELLLLNELSEGRWEVLVRPGRRAKKGVKIKF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDARDYV 178
Q LEA V++ + G ++ FS E ++ +G +PLPPYI K D
Sbjct: 111 --QDILEAEVVEYTDFGGRIVEFSWDHKKYNFEEVLNQLGEMPLPPYINEKLD----DPE 164
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y+K +GS AAPTAGLHFT +LL L GI + ++TLHVG GTF PVK E+ ++H
Sbjct: 165 RYQTVYSKKRGSAAAPTAGLHFTDSLLKELEEYGIILDYITLHVGLGTFRPVKSENIEEH 224
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH E I A TA + VK++G ++V+VGTT R LE+A +G ++ + G+T+IFI
Sbjct: 225 EMHEEYAEISAETAAKIKKVKTQGNKVVAVGTTVTRTLESAAA-NGELSEYQGWTDIFIY 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY F+ +D L++NFHLPKSTLLMLVSA G E YQ A+ YRF+S GD L+
Sbjct: 284 PGYEFKVIDSLITNFHLPKSTLLMLVSALAGKELVLSAYQKAVEKEYRFFSLGDAMLILN 343
Query: 359 KR 360
++
Sbjct: 344 RK 345
>gi|167551789|ref|ZP_02345542.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA29]
gi|205323457|gb|EDZ11296.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA29]
Length = 354
Score = 448 bits (1152), Expect = e-124, Method: Composition-based stats.
Identities = 141/359 (39%), Positives = 201/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLLSLEGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SIHATMTARH--GALFEVEFNDPRPVLDILNAIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L GI++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLAALREKGIEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A + +I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKSDLIEPFFGDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGYQYKVIDALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQKYRFFSYGDAMFIT 344
>gi|315634692|ref|ZP_07889976.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Aggregatibacter segnis ATCC 33393]
gi|315476640|gb|EFU67388.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Aggregatibacter segnis ATCC 33393]
Length = 363
Score = 448 bits (1152), Expect = e-124, Method: Composition-based stats.
Identities = 135/363 (37%), Positives = 198/363 (54%), Gaps = 17/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ ++ I +D+ ++ D ++
Sbjct: 1 MRVADFYFDLPDELIARYPKTERTASRLLQLNGENGD---IFHRTFADVLELIHPGDLMI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + +S + + + R SK K+G L
Sbjct: 58 FNNTRVIPARMFGRKIS-----GGKIEVLVERVLSESRFLAHVRASKAPKEGAELILGED 112
Query: 121 DGQSRLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ G + + + L + +G +PLPPYI RP + D
Sbjct: 113 KLGEGNGVKALMVGRQGSLFEIEIAEKQTALFDVLQQIGHMPLPPYI--DRPDEEADQER 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y K+ G+VAAPTAGLHF LL++L G+ FVTLHVGAGTF PV+VE+ +DH+
Sbjct: 171 YQTVYNKVPGAVAAPTAGLHFDDELLAKLKEKGVNFAFVTLHVGAGTFQPVRVENIEDHV 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT------TEDGIINPWSGFT 293
MH+E + A+ + K G R+++VGTTS+R +E+A D +I P+ T
Sbjct: 231 MHAEYVEVSQEVCDAIFATKKAGKRVIAVGTTSVRSIESAALAAEEKQRDVLIEPYFSDT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG +FR VD L++NFHLP+STL+MLVSAF G T Y+ A+ + YRF+SYGD
Sbjct: 291 SIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGFSHTMNAYKSAVENRYRFFSYGDA 350
Query: 354 SLL 356
+
Sbjct: 351 MFI 353
>gi|16763784|ref|NP_459399.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|161615412|ref|YP_001589377.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Paratyphi B str. SPB7]
gi|167992250|ref|ZP_02573348.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar 4,[5],12:i:- str.
CVM23701]
gi|168232374|ref|ZP_02657432.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Kentucky str. CDC 191]
gi|168240223|ref|ZP_02665155.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL486]
gi|168465490|ref|ZP_02699372.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Newport str. SL317]
gi|194449792|ref|YP_002044438.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL476]
gi|194471655|ref|ZP_03077639.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Kentucky str. CVM29188]
gi|197263896|ref|ZP_03163970.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA23]
gi|238911462|ref|ZP_04655299.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Tennessee str.
CDC07-0191]
gi|21263884|sp|Q8ZRD9|QUEA_SALTY RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|189038877|sp|A9MX31|QUEA_SALPB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|238693641|sp|B4T8P4|QUEA_SALHS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|16418908|gb|AAL19358.1| S-adenosylmethionine-tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|161364776|gb|ABX68544.1| hypothetical protein SPAB_03183 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194408096|gb|ACF68315.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL476]
gi|194458019|gb|EDX46858.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Kentucky str. CVM29188]
gi|195631754|gb|EDX50274.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Newport str. SL317]
gi|197242151|gb|EDY24771.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA23]
gi|205329469|gb|EDZ16233.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar 4,[5],12:i:- str.
CVM23701]
gi|205333419|gb|EDZ20183.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Kentucky str. CDC 191]
gi|205340375|gb|EDZ27139.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL486]
gi|261245687|emb|CBG23483.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhimurium str.
D23580]
gi|267992113|gb|ACY86998.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhimurium str.
14028S]
gi|301157016|emb|CBW16499.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhimurium str.
SL1344]
gi|312911437|dbj|BAJ35411.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhimurium str.
T000240]
gi|321225129|gb|EFX50190.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhimurium str.
TN061786]
gi|322614687|gb|EFY11616.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
315996572]
gi|322618793|gb|EFY15681.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-1]
gi|322623500|gb|EFY20339.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-3]
gi|322629202|gb|EFY25981.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-4]
gi|322631922|gb|EFY28676.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-1]
gi|322637340|gb|EFY34042.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-2]
gi|322642026|gb|EFY38636.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str. 531954]
gi|322647845|gb|EFY44320.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|322652522|gb|EFY48876.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
OH_2009072675]
gi|322653315|gb|EFY49648.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|322660536|gb|EFY56772.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str. 19N]
gi|322664688|gb|EFY60881.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
81038-01]
gi|322669259|gb|EFY65409.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
MD_MDA09249507]
gi|322670805|gb|EFY66938.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str. 414877]
gi|322678957|gb|EFY75012.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str. 366867]
gi|322681985|gb|EFY78010.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str. 413180]
gi|322685186|gb|EFY81183.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str. 446600]
gi|323128722|gb|ADX16152.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhimurium str. 4/74]
gi|323194466|gb|EFZ79661.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
609458-1]
gi|323196998|gb|EFZ82140.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
556150-1]
gi|323203982|gb|EFZ88999.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str. 609460]
gi|323206932|gb|EFZ91885.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
507440-20]
gi|323210850|gb|EFZ95722.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str. 556152]
gi|323214540|gb|EFZ99291.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB101509-0077]
gi|323223097|gb|EGA07440.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB102109-0047]
gi|323227047|gb|EGA11228.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB110209-0055]
gi|323230136|gb|EGA14256.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB111609-0052]
gi|323233874|gb|EGA17963.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009083312]
gi|323238432|gb|EGA22490.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009085258]
gi|323244120|gb|EGA28129.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
315731156]
gi|323246280|gb|EGA30263.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2009159199]
gi|323251906|gb|EGA35769.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008282]
gi|323257903|gb|EGA41582.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008283]
gi|323261084|gb|EGA44676.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008284]
gi|323264986|gb|EGA48485.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008285]
gi|323272549|gb|EGA55956.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008287]
Length = 354
Score = 448 bits (1152), Expect = e-124, Method: Composition-based stats.
Identities = 140/359 (38%), Positives = 201/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLLSLEGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SIHATMTARH--GALFEVEFNDPRPVLDILNAIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLAALREKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A + +I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKSDLIEPFFGDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGYQYKVIDALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQKYRFFSYGDAMFIT 344
>gi|85716503|ref|ZP_01047474.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Nitrobacter
sp. Nb-311A]
gi|85696692|gb|EAQ34579.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Nitrobacter
sp. Nb-311A]
Length = 371
Score = 447 bits (1151), Expect = e-124, Method: Composition-based stats.
Identities = 194/363 (53%), Positives = 242/363 (66%), Gaps = 9/363 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M FDF+LP IALRP PR+SAR++VVHP + D VSDLP +L D +V
Sbjct: 12 MRTDLFDFELPAESIALRPASPRNSARMLVVHPGTR----LHDQRVSDLPEWLRPGDQLV 67
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI AQL+G R E I TL R+ + WS RP+K + GD++ F +
Sbjct: 68 VNDTRVIAAQLHGRRI--GREAEPRIDATLIKRLDGSRWSALVRPAKKLVAGDVVRFGND 125
Query: 121 D---GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+A V K GE+ FS G L+R I+ +G+ PLPPYIA KR D +D
Sbjct: 126 GRVCFLGHLDAQVESKGEEGEVTFAFSFHGPTLDRAIAELGSTPLPPYIASKRAPDDQDA 185
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT +A +G+VAAPTAGLHFT + + L G+ ++ +TLHVGAGTF+PVK EDT
Sbjct: 186 ADYQTMFAAHEGAVAAPTAGLHFTPVIETALRERGVGLHRITLHVGAGTFLPVKAEDTAG 245
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MHSE G I A TA ALN+ +SRGGRIV+VGTTSLRLLE+A EDG I P++G T IFI
Sbjct: 246 HRMHSEWGTISAETADALNTARSRGGRIVAVGTTSLRLLESAAAEDGRIAPFTGETAIFI 305
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFRA+DILM+NFHLP+STL MLVSAF G++ K+ Y HAI+ YRFYSYGD LLF
Sbjct: 306 TPGYRFRAIDILMTNFHLPRSTLFMLVSAFSGLKTMKQAYAHAIAAGYRFYSYGDACLLF 365
Query: 358 QKR 360
+R
Sbjct: 366 PER 368
>gi|283834277|ref|ZP_06354018.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Citrobacter
youngae ATCC 29220]
gi|291069802|gb|EFE07911.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Citrobacter
youngae ATCC 29220]
Length = 354
Score = 447 bits (1151), Expect = e-124, Method: Composition-based stats.
Identities = 141/360 (39%), Positives = 204/360 (56%), Gaps = 19/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFTFELPESLIAHYPQAERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ ++AT++ + + L + ++ +G +PLPPYI RP + D
Sbjct: 113 E---SIKATMVARHDA---LFEVEFDDERSVLDILNAIGHMPLPPYI--DRPDEDADREL 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y++ G+VAAPTAGLHF LL++L GI++ FVTLHVGAGTF PV+V+ +DHI
Sbjct: 165 YQTVYSEKPGAVAAPTAGLHFDERLLAKLREKGIEMAFVTLHVGAGTFQPVRVDTIEDHI 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFI 297
MHSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ G T IFI
Sbjct: 225 MHSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIAPFFGDTQIFI 284
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y A+ YRF+SYGD +
Sbjct: 285 YPGYQYKVIDALVTNFHLPESTLIMLVSAFAGYKNTMHAYHEAVKAEYRFFSYGDAMFIT 344
>gi|239616653|ref|YP_002939975.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Kosmotoga
olearia TBF 19.5.1]
gi|239505484|gb|ACR78971.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Kosmotoga
olearia TBF 19.5.1]
Length = 340
Score = 447 bits (1151), Expect = e-124, Method: Composition-based stats.
Identities = 147/358 (41%), Positives = 203/358 (56%), Gaps = 21/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD++LP IA PV PRD +RLMV+ + + +L D +V
Sbjct: 3 MKVSDFDYELPKELIAQEPVQPRDHSRLMVIRRDREN---FEHTHFYRIIDYLEPGDLLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N++KVI A+L G + ++ L +V W RP IK+G++L F
Sbjct: 60 MNDSKVIPARLLGKK-----STGAKVEIVLIEKVGSKQWKAIVRPGSKIKRGNVLLF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L+ V++ + +L +G +I +G +P+PPYI++ D Y
Sbjct: 112 ---EDLQCEVVEHCDDSTRIL--EFTGSNPWEKIRRIGKLPIPPYISKY----PDDPNLY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GSVAAPTAGLHFT +LL +L GIK+ FVTLHVG GTF PVKVE+ +DH+M
Sbjct: 163 QTVYAKKDGSVAAPTAGLHFTDSLLKKLKEKGIKMAFVTLHVGLGTFRPVKVENVEDHVM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + T + + K G R+++VGTT +R LE A DG + SG T+IFI P
Sbjct: 223 HSEYYTLPEETVELIKETKRNGNRVIAVGTTVVRTLEAVAQKHDGKLVAESGRTDIFIYP 282
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+ +D L++NFHLPKSTLLMLV+AF G E+ K Y AI YRF+S+GD ++
Sbjct: 283 PYEFKVIDGLITNFHLPKSTLLMLVAAFTGREKILKAYNEAIKLRYRFFSFGDACFIY 340
>gi|310658617|ref|YP_003936338.1| s-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
sticklandii DSM 519]
gi|308825395|emb|CBH21433.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Clostridium
sticklandii]
Length = 341
Score = 447 bits (1151), Expect = e-124, Method: Composition-based stats.
Identities = 145/357 (40%), Positives = 192/357 (53%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F FDLP IA P+ RD +RLM + N + D+ LN ND +V
Sbjct: 1 MKTNDFYFDLPEDLIAQVPLKNRDESRLMTLDKNTG---EVKHKTFRDILECLNDNDILV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G + EI L R N+W +P+K +K G + F
Sbjct: 58 LNNTRVIPARLFGFKA----ETNAEIEILLLSRKDINTWEALTKPAKRLKLGTKIIF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L V + G + F GI E + +G +PLPPYI K D Y
Sbjct: 111 -GDGLLIGIVKELQEDGIRTIEFEYEGI-FEDVLDRLGNMPLPPYIHEK----LEDKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K+ GS AAPTAGLHFT +L L + G+++ +VTLHVG GTF PVK E DH M
Sbjct: 165 QTVYSKVTGSSAAPTAGLHFTPEILLELKNKGVQIEYVTLHVGLGTFRPVKAESIFDHTM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I LN K G RIV VGTTS+R LE++ ++ SG+T+IFI P
Sbjct: 225 HKEYFEIAEDVKNRLNEAKKNGKRIVCVGTTSVRTLESSANILNNLDRNSGWTDIFIYPS 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+ VD +++NFHLP+STL+M++SAF G Y+ AI YRF+S+GD +F
Sbjct: 285 YEFKFVDAMITNFHLPESTLIMMISAFAGKTYIMDAYEEAIREKYRFFSFGDAMYIF 341
>gi|330965894|gb|EGH66154.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. actinidiae str. M302091]
Length = 354
Score = 447 bits (1151), Expect = e-123, Method: Composition-based stats.
Identities = 146/358 (40%), Positives = 202/358 (56%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S+RL+ + ++ +DL L S D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTLDGPTGA---LAHRQFTDLLEHLRSGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDGHRVLAHVRASKSPKPGSSILI--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
EA ++ + + L E+ + VG +PLPPYI RP + D Y
Sbjct: 110 --DGGGEAEMVARHDALFELRFAE----EVLPLLDRVGHMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF L+ + + G++ FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDQPLMEAIAAKGVETAFVTLHVGAGTFQPVRVEQIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + ++RGGR+++VGTTS+R LE+A DG + P+SG T+IFI PG
Sbjct: 222 HSEWLEVSQDVVDAVAACRARGGRVIAVGTTSVRSLESAAR-DGHLKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFSYGDAMFITR 338
>gi|213971539|ref|ZP_03399650.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. tomato T1]
gi|301386144|ref|ZP_07234562.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. tomato Max13]
gi|302060706|ref|ZP_07252247.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. tomato K40]
gi|302135099|ref|ZP_07261089.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. tomato NCPPB 1108]
gi|213923731|gb|EEB57315.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. tomato T1]
Length = 354
Score = 447 bits (1151), Expect = e-123, Method: Composition-based stats.
Identities = 148/358 (41%), Positives = 202/358 (56%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S+RL+ + ++ +DL L S D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTLDGPTGA---LAHRQFTDLLEHLRSGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRASKSPKPGSSILI--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
EA ++ + + L E+ + VG +PLPPYI RP + D Y
Sbjct: 110 --DGGGEAEMVARHDALFELRFAE----EVLPLLDRVGHMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL + + GI+ FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDQPLLEAIAAKGIETAFVTLHVGAGTFQPVRVEQIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + ++RGGR+++VGTTS+R LE+A DG + P+SG T+IFI PG
Sbjct: 222 HSEWLEVSQDVVDAVAACRARGGRVIAVGTTSVRSLESAAR-DGQLKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFSYGDAMFITR 338
>gi|168237515|ref|ZP_02662573.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
SL480]
gi|194733996|ref|YP_002113436.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
CVM19633]
gi|238689775|sp|B4TZH8|QUEA_SALSV RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|194709498|gb|ACF88719.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
CVM19633]
gi|197289460|gb|EDY28823.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
SL480]
Length = 354
Score = 447 bits (1151), Expect = e-123, Method: Composition-based stats.
Identities = 141/359 (39%), Positives = 201/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLLSLEGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SIHATMTARH--GALFEVEFNDPRPVLDILNAIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L GI++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLAALREKGIEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A + +I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKSDLIEPFFGDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGYQYKVIDALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQKYRFFSYGDAMFIT 344
>gi|28868619|ref|NP_791238.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. tomato str. DC3000]
gi|37999794|sp|Q9L6W9|QUEA_PSESM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|8037772|gb|AAF71483.1|AF232004_1 QueA [Pseudomonas syringae pv. tomato]
gi|28851857|gb|AAO54933.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. tomato str. DC3000]
gi|331019401|gb|EGH99457.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. lachrymans str. M302278PT]
Length = 354
Score = 447 bits (1151), Expect = e-123, Method: Composition-based stats.
Identities = 146/358 (40%), Positives = 202/358 (56%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S+RL+ + ++ +DL L S D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTLDGPTGA---LAHRQFTDLLEHLRSGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRASKSPKPGSSILI--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
EA ++ + + L E+ + VG +PLPPYI RP + D Y
Sbjct: 110 --DGGGEAEMVARHDALFELRFAE----EVLPLLDRVGHMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF L+ + + G++ FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDQPLMEAIAAKGVETAFVTLHVGAGTFQPVRVEQIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + ++RGGR+++VGTTS+R LE+A DG + P+SG T+IFI PG
Sbjct: 222 HSEWLEVSQDVVDAVAACRARGGRVIAVGTTSVRSLESAAR-DGQLKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFSYGDAMFITR 338
>gi|224582241|ref|YP_002636039.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Paratyphi C strain
RKS4594]
gi|254764286|sp|C0Q7S8|QUEA_SALPC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|224466768|gb|ACN44598.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Paratyphi C strain
RKS4594]
Length = 354
Score = 447 bits (1151), Expect = e-123, Method: Composition-based stats.
Identities = 140/359 (38%), Positives = 201/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPDSLIAHYPQPERSRCRLLSLEGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SIHATMTARH--GALFEVEFNDPRPVLDILNAIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLAALREKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A + +I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKSDLIEPFFGDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGYQYKVIDALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQKYRFFSYGDAMFIT 344
>gi|77359285|ref|YP_338860.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pseudoalteromonas haloplanktis TAC125]
gi|91207395|sp|Q3ILB9|QUEA_PSEHT RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|76874196|emb|CAI85417.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein ) [Pseudoalteromonas haloplanktis
TAC125]
Length = 343
Score = 447 bits (1151), Expect = e-123, Method: Composition-based stats.
Identities = 139/360 (38%), Positives = 207/360 (57%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R S+RL+ + V+ + SDL +N ND +V
Sbjct: 1 MRVADFSFDLPDELIARFPKQDRTSSRLLSLDGPSG---VVEHKVFSDLLELVNENDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + + + R SK +K G+ +
Sbjct: 58 FNNTRVIPARMFGQKAS-----GGKVEVLVERVLDEHRVLAHVRASKSLKPGNEVIL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + +AT++ + +T + + + ++ +G +PLPPYI RP + D Y
Sbjct: 110 --EGKAKATMVARHDT--LFELEFEHSQNVLDILNDIGHMPLPPYI--DRPDNEADRERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF L++ L + G+++ FVTLHVGAGTF PV+V D+HIM
Sbjct: 164 QTVYGEKPGAVAAPTAGLHFDDKLMTALKNKGVQMAFVTLHVGAGTFQPVRVATVDEHIM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-EDGIINPWSGFTNIFITP 299
HSE + A+ + K+ GGR++++GTTS+R LE+A G ++ + G T+IFI P
Sbjct: 224 HSEYIEVPDDVVAAVANTKANGGRVIAIGTTSVRSLESAAKVHGGKLDTYFGDTDIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY+F VD +++NFHLP+STL+MLVSAF G Y AI YRF+SYGD L +K
Sbjct: 284 GYQFNVVDAMITNFHLPESTLIMLVSAFAGQNNIMGAYNTAIEQQYRFFSYGDAMFLTRK 343
>gi|86133031|ref|ZP_01051618.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Dokdonia
donghaensis MED134]
gi|85816428|gb|EAQ37619.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Dokdonia
donghaensis MED134]
Length = 349
Score = 447 bits (1151), Expect = e-123, Method: Composition-based stats.
Identities = 142/361 (39%), Positives = 201/361 (55%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F+FDLP +A P RD +RLMV++ I + DL + D +V
Sbjct: 1 MKLSHFNFDLPDELLAEHPAENRDESRLMVLNRK---EQTIEHKMFKDLIDYFEPEDVMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + I L ++ + W V P++ I+ G+ L+F
Sbjct: 58 LNNTKVFPARLYGNK----EKTGARIEVFLLRELNSETRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
+ L A VID + L F G E ++++ +G PLP YI R+ ++ D
Sbjct: 114 DDE---SLVAEVIDNTTSRGRTLRFLYDGSYEEFRKKLTSLGETPLPKYINRE--VEPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ +LL RL GI VTLHVG GTF V+VED
Sbjct: 169 EERYQTIYAKEEGAVAAPTAGLHFSKHLLKRLEIKGIDFAEVTLHVGLGTFSAVEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE +I P + +N S R+ +VGTT++R++E+A + G +N +SG+TN F
Sbjct: 229 KHKMDSEEAYIRKPATEIINKAISEKRRVCAVGTTAMRVMESAVSSSGTLNEFSGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH PKSTLLM+VSAF G + K+ Y A+ Y+FYSYGD L+
Sbjct: 289 IFPPYDFSIANCMITNFHTPKSTLLMMVSAFAGHDFMKRAYDEAVKEKYKFYSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|325131502|gb|EGC54209.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis M6190]
gi|325137548|gb|EGC60130.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis ES14902]
Length = 346
Score = 447 bits (1151), Expect = e-123, Method: Composition-based stats.
Identities = 151/360 (41%), Positives = 208/360 (57%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P+ + + D + DLP ++ + D +V
Sbjct: 1 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPD----MPMQDRVFGDLPDYVEAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDSHTALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 109 --EGGIRAVMVGR--EGELFCLRFEGGQTVYELLEQNGHLPLPPYI--ERAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+VE ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVEKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + T A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 223 HSEWFEVPSETVAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRF D L++NFHLPKSTLLMLVSAF G+ + Y++A+ YRF+SYGD +L +
Sbjct: 283 YRFNVADRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGDAMILGRNE 342
>gi|56461306|ref|YP_156587.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase [Idiomarina
loihiensis L2TR]
gi|81599980|sp|Q5QVL1|QUEA_IDILO RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|56180316|gb|AAV83038.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase [Idiomarina
loihiensis L2TR]
Length = 351
Score = 447 bits (1150), Expect = e-123, Method: Composition-based stats.
Identities = 135/360 (37%), Positives = 202/360 (56%), Gaps = 19/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ V +F F+LP IA P R ++RL+ V + I ++ +N+ D +V
Sbjct: 9 LKVSDFSFELPDELIARYPQEQRSASRLLSV---KANENSIEHKHFKNIVDEINAGDLLV 65
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + ++ + + + + R ++ K G L
Sbjct: 66 FNDTRVIPARLLGEKVS-----GGKVEVLVERLLDDHRVLAHVRANRAPKAGAELLL--- 117
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++ T++ + + + + + + G +PLPPYI RP ++ D Y
Sbjct: 118 --EGHVKITMLARHDA--LFELKFEHDETVLELLEQYGHMPLPPYI--DRPDESSDKERY 171
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF +L +L G+ +VTLHVGAGTF PV+VED +DH+M
Sbjct: 172 QTVYNREPGAVAAPTAGLHFDDEILQQLRDKGVNSAYVTLHVGAGTFQPVRVEDINDHVM 231
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A T A+ K+ GGR+++VGTTS+R LE+A + + I P+ TNIFI
Sbjct: 232 HSEYAKVSAETCNAIKQTKASGGRVIAVGTTSVRSLESAAQASTNESIEPFFDDTNIFIY 291
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY F+ VD +++NFHLP+STL+MLVSAF G + K Y AI YRF+SYGD LL +
Sbjct: 292 PGYEFKVVDSMITNFHLPESTLIMLVSAFVGRDLIMKAYNEAIKERYRFFSYGDAMLLQR 351
>gi|169824511|ref|YP_001692122.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Finegoldia
magna ATCC 29328]
gi|302380757|ref|ZP_07269222.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Finegoldia
magna ACS-171-V-Col3]
gi|303233794|ref|ZP_07320448.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Finegoldia
magna BVS033A4]
gi|238687748|sp|B0S1J2|QUEA_FINM2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|167831316|dbj|BAG08232.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Finegoldia
magna ATCC 29328]
gi|302311700|gb|EFK93716.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Finegoldia
magna ACS-171-V-Col3]
gi|302495228|gb|EFL54980.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Finegoldia
magna BVS033A4]
Length = 345
Score = 447 bits (1150), Expect = e-123, Method: Composition-based stats.
Identities = 145/357 (40%), Positives = 199/357 (55%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD++L IA P+ RD ++LMV+ + ++ +LN D +V
Sbjct: 1 MNTDDFDYELDEKFIAQTPLDKRDESKLMVMDRFNGNTEI---KKFYNIIDYLNPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G R +E++I L + W +P K +K ++ F
Sbjct: 58 CNNTRVIPARLFGHR----PEKEEKIEVLLLQQTEDK-WECLVKPGKKMKLNQVIEF--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A V+D G +L F GI E ++ +G +PLPPYI K D Y
Sbjct: 110 --SDSVSAKVVDITEDGSRILKFEYEGI-FEERLDELGNMPLPPYIKEK----LNDKERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT+ LL ++ GI V F+TLHVG GTF PVKV+D DH M
Sbjct: 163 QTVYSKHNGSAAAPTAGLHFTNELLEKIKDKGIYVVFLTLHVGLGTFRPVKVDDVKDHHM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDG-IINPWSGFTNIFITP 299
HSE I T +N KS+G I++VGTTS+R LET T + + SG+T+IFI P
Sbjct: 223 HSEYYTISQETVDIINRQKSKGHNIIAVGTTSVRTLETVTHNNNSKLVAESGWTDIFIYP 282
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
G+ F VD L++NFHLPKSTL+MLVSAF E Y+ A + +RF+S+GD +
Sbjct: 283 GFEFNIVDSLITNFHLPKSTLMMLVSAFSKKEYIFDAYEKAKQNDFRFFSFGDAMFI 339
>gi|120434719|ref|YP_860406.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Gramella
forsetii KT0803]
gi|117576869|emb|CAL65338.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Gramella
forsetii KT0803]
Length = 351
Score = 447 bits (1150), Expect = e-123, Method: Composition-based stats.
Identities = 144/361 (39%), Positives = 200/361 (55%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F+F+LP +A P RD A+LMV++ I DL + D +V
Sbjct: 3 MKLSNFNFELPQELLAEYPSENRDEAKLMVLNRK---EQTIEHKKFKDLIDYFEPEDVMV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + I L ++P + W V P++ I+ G+ L+F
Sbjct: 60 LNNTKVFPARLYGNK----EKTGARIEVFLLRELNPETKLWDVLVDPARKIRIGNKLYFG 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDARD 176
+ L A VID + L F G + ++ +G PLP YI KR ++ D
Sbjct: 116 EDE---SLVAEVIDNTTSRGRTLRFLYDGSYSDFRIKLKELGQTPLPKYI--KRDVEPSD 170
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ +LL RL GI VTLHVG GTF PV+VED
Sbjct: 171 EDRYQTIYAKNEGAVAAPTAGLHFSKHLLKRLEIKGIDFAEVTLHVGLGTFSPVEVEDLS 230
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE FI + +N+ K+ R+ +VGTT +R+LE+A + D +N + G+TN F
Sbjct: 231 KHKMDSEEAFITKDATEVINNAKTEKRRVCAVGTTVMRVLESAVSSDQTLNEFGGWTNKF 290
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH PKSTLLM+VSAF G + KK Y+ A+ YRFY+YGD L+
Sbjct: 291 IFPPYDFNIANCMITNFHTPKSTLLMMVSAFAGHDFMKKAYEEAVKEKYRFYTYGDAMLI 350
Query: 357 F 357
Sbjct: 351 I 351
>gi|86140645|ref|ZP_01059204.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Leeuwenhoekiella blandensis MED217]
gi|85832587|gb|EAQ51036.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Leeuwenhoekiella blandensis MED217]
Length = 351
Score = 447 bits (1150), Expect = e-123, Method: Composition-based stats.
Identities = 141/361 (39%), Positives = 199/361 (55%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F+FDLP +A P RD ARLMV++ I L DL + ND +V
Sbjct: 3 MKLSHFNFDLPKELLAEYPAENRDEARLMVLNRKTQT---IEHKLFKDLIDYFEPNDVMV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + I L ++ + W V P++ I+ G+ L+F
Sbjct: 60 LNNTKVFPARLYGNK----EKTGARIEVFLLRELNSETRLWDVLVDPARKIRIGNKLYFG 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
+ L A VID + L F G E +++ +G PLP YI KR ++ D
Sbjct: 116 DDE---SLVAEVIDNTTSRGRTLRFLYDGSYQEFRNKLTELGETPLPKYI--KRDVEPED 170
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT +AK +G+VAAPTAGLHF+ +LL RL G+ VTLHVG GTF PV+VED
Sbjct: 171 AERYQTIFAKNEGAVAAPTAGLHFSKHLLKRLEIKGLNFAEVTLHVGLGTFSPVEVEDLS 230
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE +ID +N ++ +VGTT +R LE++ + + +N +SG+TN F
Sbjct: 231 KHKMDSEEAYIDRTATSTINKAIGENRKVCAVGTTVMRALESSVSSNRTLNEFSGWTNKF 290
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH PKSTL+M+VSAF G + K+ Y+ A+ Y+FYSYGD L+
Sbjct: 291 IFPPYDFSIANCMITNFHTPKSTLMMMVSAFAGHDFMKEAYEQAVKEKYKFYSYGDAMLI 350
Query: 357 F 357
Sbjct: 351 I 351
>gi|308050488|ref|YP_003914054.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase [Ferrimonas
balearica DSM 9799]
gi|307632678|gb|ADN76980.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase [Ferrimonas
balearica DSM 9799]
Length = 352
Score = 447 bits (1150), Expect = e-123, Method: Composition-based stats.
Identities = 137/365 (37%), Positives = 206/365 (56%), Gaps = 23/365 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDFDLP IA P R ++RL+ + + + D DL + D +V
Sbjct: 1 MQVADFDFDLPDELIARYPTQERTASRLLHLDGDTGA---LHDGQFPDLLELVRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L+G + +I + + + R SK K G L F
Sbjct: 58 FNNTRVIPARLHGQKAS-----GGKIEVLVERVLDSERVLAHVRSSKSPKPGTELQF--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ AT++ + + L + G + + + +G +PLPPYI RP + D
Sbjct: 110 --DDGVTATMVARHDA---LFELAFHGNDTVLNILDRIGHMPLPPYI--DRPDENSDRER 162
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y + G+VAAPTAGLHF ++L+RL G++ +VTLHVGAGTF PV+V+ +DH
Sbjct: 163 YQTVYNQRPGAVAAPTAGLHFDESMLARLKEKGVETAYVTLHVGAGTFQPVRVDKVEDHH 222
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNI 295
MHSE + + +A+ ++RGGR+++VGTTS+R LE+A ++ P++ T+I
Sbjct: 223 MHSEFAEVGSDVVEAVKRTRARGGRVIAVGTTSVRSLESAARAAREHGEVLAPYAQETDI 282
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
F+ PG F VD +++NFHLP+STL+MLVSAF G + YQHA++ YRF+SYGD
Sbjct: 283 FLYPGCEFLLVDAMITNFHLPESTLIMLVSAFAGQDHVMNAYQHAVAQKYRFFSYGDAMF 342
Query: 356 LFQKR 360
+ ++
Sbjct: 343 VTRQE 347
>gi|119775329|ref|YP_928069.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
amazonensis SB2B]
gi|166216750|sp|A1S7P3|QUEA_SHEAM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|119767829|gb|ABM00400.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
amazonensis SB2B]
Length = 345
Score = 447 bits (1150), Expect = e-123, Method: Composition-based stats.
Identities = 132/360 (36%), Positives = 204/360 (56%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R ++RL+ + + ++D +D+ A + D ++
Sbjct: 1 MRVADFTFDLPDELIARYPMAERTASRLLHLDGSTGA---LADRQFTDILALIEPGDLMI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERMLDDKRILAHVRSSKSPKPGAEIIL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ T+ + + + + + + VG +PLPPYI RP + D Y
Sbjct: 110 --DGGFKMTMDARHDA--LFELSLKDDKTILEVLEAVGHMPLPPYI--DRPDEDTDKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF ++L+ L + G+ + FVTLHVGAGTF PV+V++ +H M
Sbjct: 164 QTVYNERPGAVAAPTAGLHFDESILAALKAKGVDMAFVTLHVGAGTFQPVRVDNVLEHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFITP 299
HSE + A + + + K+ G R+++VGTTS+R LE+A +G + P+ G T+IFI P
Sbjct: 224 HSEWAEVPADVVEKIRATKAAGKRVIAVGTTSVRSLESAAKASEGELEPFCGDTDIFIFP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
G+ F+ VD +++NFHLP+STL+MLVSAF G +E Y+HA+ YRF+SYGD + +K
Sbjct: 284 GFEFKVVDAMVTNFHLPESTLIMLVSAFAGFDEVIGAYRHAVEQKYRFFSYGDAMFVTKK 343
>gi|186686064|ref|YP_001869260.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Nostoc
punctiforme PCC 73102]
gi|186468516|gb|ACC84317.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Nostoc
punctiforme PCC 73102]
Length = 401
Score = 447 bits (1150), Expect = e-123, Method: Composition-based stats.
Identities = 156/387 (40%), Positives = 209/387 (54%), Gaps = 43/387 (11%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVH-PNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+D+ LPP IA P PRDS+RL+VV+ P S H+ DLPA L S D +V NNT
Sbjct: 21 YDYTLPPELIAQNPAVPRDSSRLLVVNSPTTGAETEASHHIFHDLPALLRSGDLLVMNNT 80
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF------- 117
+VI A+L G + +I L N W +P K K+G + F
Sbjct: 81 RVIPARLYGHKT-----TGAKIQVLLLEERQYNCWLALVKPGKSFKQGTKIIFEAKQRIG 135
Query: 118 -----------------------FSQDGQSRLEATVID-KWNTGEILLVFSI-SGIELER 152
FS +L ATV++ TG LL F + G L +
Sbjct: 136 DSKEAEGRSAGGRGENSSPCSLDFSPVTSQQLTATVLETDAATGGRLLQFDVPEGKPLVQ 195
Query: 153 QISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIG 212
+ + G +PLPPYI D + YQT YA+ G++AAPTAGLHFT LL +L
Sbjct: 196 LLEVFGEVPLPPYITASSAADEQ----YQTVYAEQPGAIAAPTAGLHFTPQLLQKLRDRN 251
Query: 213 IKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTS 272
I FVTLHVG GTF PV+VED H MH E + A T + + + K+ GGRI++VGTT+
Sbjct: 252 INQAFVTLHVGVGTFRPVEVEDVTTHQMHEEWIEVPAATVEQIRATKAAGGRIIAVGTTA 311
Query: 273 LRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEE 332
+R LE A + G + + G T++FI PGY++R VD L++NFHLP+S+LLMLVSA G E
Sbjct: 312 VRALEGAA-KSGNLQAFCGKTDLFIYPGYQWRVVDGLITNFHLPRSSLLMLVSALIGRER 370
Query: 333 TKKMYQHAISHAYRFYSYGDTSLLFQK 359
+Y AI+ YRFYS+GD L+ +
Sbjct: 371 LLNIYNEAIASKYRFYSFGDAMLILPE 397
>gi|261868461|ref|YP_003256383.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Aggregatibacter actinomycetemcomitans D11S-1]
gi|261413793|gb|ACX83164.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Aggregatibacter actinomycetemcomitans D11S-1]
Length = 363
Score = 447 bits (1150), Expect = e-123, Method: Composition-based stats.
Identities = 135/363 (37%), Positives = 196/363 (53%), Gaps = 17/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + I SD+ +N D ++
Sbjct: 1 MRVADFYFDLPDELIARYPKTERTASRLLQLDGENG---EIFHRTFSDVLDLINPGDLMI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + +S + + + R SK K+G L
Sbjct: 58 FNNTRVIPARMFGRKSS-----GGKIEVLVERVLSESRFLAHVRASKAPKEGAELILGED 112
Query: 121 DGQSRLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ G + + + L + +G +PLPPYI RP + D
Sbjct: 113 KLGEGHGVNAVMVGRQGSLFEIEIAEKQTALFDVLQKIGHMPLPPYI--DRPDEEADQER 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y K+ G+VAAPTAGLHF LL++L + G+ FVTLHVGAGTF PV+VE+ +DH+
Sbjct: 171 YQTVYNKVPGAVAAPTAGLHFDDELLTKLKAKGVNFTFVTLHVGAGTFQPVRVENIEDHV 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT------TEDGIINPWSGFT 293
MH+E + A+ + + G R+++VGTTS+R +E+A +I P+ T
Sbjct: 231 MHAEYVEVPQEVCDAILATQKAGKRVIAVGTTSVRSIESAALAAEEKKSAVLIEPYFSDT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG FR VD L++NFHLP+STL+MLVSAF G T Y+ A+ + YRF+SYGD
Sbjct: 291 SIFIYPGKSFRVVDCLITNFHLPESTLIMLVSAFAGFSYTMNAYKSAVENRYRFFSYGDA 350
Query: 354 SLL 356
+
Sbjct: 351 MFI 353
>gi|254466678|ref|ZP_05080089.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodobacterales bacterium Y4I]
gi|206687586|gb|EDZ48068.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodobacterales bacterium Y4I]
Length = 354
Score = 447 bits (1150), Expect = e-123, Method: Composition-based stats.
Identities = 166/362 (45%), Positives = 227/362 (62%), Gaps = 14/362 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP + IA RP PR SARL+V + D V+DL +L D +V
Sbjct: 1 MKLSDFDFDLPDTLIATRPANPRSSARLLVAAGGS-----LHDGRVTDLVDWLQPGDRLV 55
Query: 61 FNNTKVITAQLNG--VRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+L+G R +I TL + SW+ +P K I++G+ + F
Sbjct: 56 LNDTKVIPARLSGLRRRDSAQGPVAAKIEATLLEPRADGSWAALLKPLKKIREGEEIVF- 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
S D + LEA G+ L F++SG + + ++ G +PLPPYIA KR D +D
Sbjct: 115 SDDLSAALEAI-----EDGQGHLRFNLSGTDFDAALAEAGAMPLPPYIAAKRAADEQDKT 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF + LL L + G+++ +VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVWARNSGAVAAPTASLHFDAPLLEALKARGVEISYVTLHVGAGTFLPVKVEDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A + + K+ GGR++ VGTT+LRL+E+A DG I+ W G T+IFI
Sbjct: 230 RMHAEWGKVSEEAASEIAATKAAGGRVIPVGTTALRLIESAAR-DGQIHAWEGDTDIFIY 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG++F+ D LM+NFHLPKSTLLMLVSA G EE +++Y HA+ YRF+SYGD SLL
Sbjct: 289 PGFKFQVADALMTNFHLPKSTLLMLVSALMGQEEIRRIYDHAVRSGYRFFSYGDASLLIP 348
Query: 359 KR 360
+
Sbjct: 349 AK 350
>gi|56414441|ref|YP_151516.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Paratyphi A str. ATCC
9150]
gi|197363362|ref|YP_002142999.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Paratyphi A str.
AKU_12601]
gi|81599427|sp|Q5PFT5|QUEA_SALPA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|238689947|sp|B5BDC9|QUEA_SALPK RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|56128698|gb|AAV78204.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Paratyphi A str. ATCC
9150]
gi|197094839|emb|CAR60372.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Paratyphi A str.
AKU_12601]
Length = 354
Score = 447 bits (1150), Expect = e-123, Method: Composition-based stats.
Identities = 140/359 (38%), Positives = 201/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLLSLEGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SIHATMTARH--GALFEVEFNDPRPVLDILNAIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLAALREKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A + +I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKSDLIEPFFGDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGYQYKVIDALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQKYRFFSYGDAMFIT 344
>gi|188582509|ref|YP_001925954.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Methylobacterium populi BJ001]
gi|238692892|sp|B1ZIL2|QUEA_METPB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|179346007|gb|ACB81419.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Methylobacterium populi BJ001]
Length = 366
Score = 447 bits (1150), Expect = e-123, Method: Composition-based stats.
Identities = 196/369 (53%), Positives = 256/369 (69%), Gaps = 14/369 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP + IALRP PRD++RL+VV P ++D V DLPA LN DA+V
Sbjct: 1 MRVDLFDFELPEAAIALRPASPRDASRLLVVRPG----ETLADRGVRDLPALLNPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L+G+R + LH+R +P+ W +ARP+K + GD + F +
Sbjct: 57 FNDTRVIPARLSGIRHRAGG-TGQRCEAMLHLREAPDRWRAFARPAKRLAPGDRIRFGGE 115
Query: 121 DGQ---------SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRP 171
S L+ATV ++ GEILL F ++G L+ I+ +G +PLPPYIA KR
Sbjct: 116 GANQGASEVCVLSGLDATVEERGEGGEILLRFDLAGPALDEAIAGLGALPLPPYIAGKRA 175
Query: 172 IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK 231
DARD DYQT YA+ G+VAAPTAGLHF+ LL + + GI+ VTLHVGAGTF+PVK
Sbjct: 176 TDARDTTDYQTVYAREPGAVAAPTAGLHFSDALLDGIDAAGIERIHVTLHVGAGTFLPVK 235
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSG 291
+DT+ H MH+EIG +D TA+ LN+V++RG RIV+VGTT+LRLLE+AT DG + P+SG
Sbjct: 236 ADDTEAHRMHAEIGILDTATAERLNAVRARGNRIVAVGTTALRLLESATDPDGTVRPFSG 295
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T+IFITPGYRFRAVD L++NFHLP+STL MLVSAF G++ + Y HAI+ YRFYSYG
Sbjct: 296 ATDIFITPGYRFRAVDALVTNFHLPRSTLFMLVSAFSGLDTMRAAYAHAIASGYRFYSYG 355
Query: 352 DTSLLFQKR 360
D SLLF +R
Sbjct: 356 DASLLFPER 364
>gi|330872901|gb|EGH07050.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. morsprunorum str. M302280PT]
Length = 354
Score = 447 bits (1150), Expect = e-123, Method: Composition-based stats.
Identities = 146/358 (40%), Positives = 202/358 (56%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S+RL+ + ++ +DL L S D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTLDGPTGA---LAHRQFTDLLEHLRSGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRASKSPKPGSSILI--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
EA ++ + + L E+ + VG +PLPPYI RP + D Y
Sbjct: 110 --DGGGEAEMVARHDALFELRFAE----EVLPLLDRVGHMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF L+ + + G++ FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDQPLMEAIAAKGVETAFVTLHVGAGTFQPVRVEQIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + ++RGGR+++VGTTS+R LE+A DG + P+SG T+IFI PG
Sbjct: 222 HSEWLEVSQDVVDAVAACRARGGRVIAVGTTSVRSLESAAR-DGHLKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFSYGDAMFITR 338
>gi|313205951|ref|YP_004045128.1| s-adenosylmethionine--tRNA ribosyltransferase-isomerase [Riemerella
anatipestifer DSM 15868]
gi|312445267|gb|ADQ81622.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Riemerella
anatipestifer DSM 15868]
Length = 349
Score = 447 bits (1150), Expect = e-123, Method: Composition-based stats.
Identities = 140/361 (38%), Positives = 197/361 (54%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F+F+LPP +A P RD ARLMV++ I L D+ + + ND +
Sbjct: 1 MKTSDFNFNLPPELLAEHPSEHRDEARLMVLNRKNQT---IEHKLFKDVIDYFDENDLFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
FNNTKV A+L G + + +I L + + W V P++ I+ G+ L F
Sbjct: 58 FNNTKVFPARLYGNK----EKTGAKIEVFLLRELDKETRVWDVLVDPARKIRIGNKLFF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D L A VID + L F G E ++ +G PLP YI KR ++ D
Sbjct: 113 --DEDESLVAEVIDNTTSRGRTLRFLYDGSYEEFRAKLKELGETPLPKYI--KREVEPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ +L+ RL GI VTLHVG GTF P++VED
Sbjct: 169 AERYQTIYAKKEGAVAAPTAGLHFSKHLMKRLEIKGINFAEVTLHVGLGTFNPIEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M E FID A +N RI +VGTT++R +ET+ + + ++ + G+TN F
Sbjct: 229 KHKMECEEAFIDQKNADIINKAIDEDRRICAVGTTTMRTIETSVSSNRKLSAYHGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F D +++NFH PKSTL+M+++AF G + Y+ A+ Y+FYSYGD L+
Sbjct: 289 IYPPYDFAVADSMITNFHTPKSTLIMMIAAFAGKDFVMHAYEEAVKEKYKFYSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 L 349
>gi|218688268|ref|YP_002396480.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli ED1a]
gi|254764277|sp|B7MPG6|QUEA_ECO81 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|218425832|emb|CAR06638.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli ED1a]
Length = 356
Score = 446 bits (1149), Expect = e-123, Method: Composition-based stats.
Identities = 140/359 (38%), Positives = 204/359 (56%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRIFAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SINATMTARH--GALFEVEFNDQRSVLDILNSIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFIT 344
>gi|168818989|ref|ZP_02830989.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Weltevreden str.
HI_N05-537]
gi|205343962|gb|EDZ30726.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Weltevreden str.
HI_N05-537]
gi|320084679|emb|CBY94470.1| synthesis of queuine in tRNA [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
Length = 354
Score = 446 bits (1149), Expect = e-123, Method: Composition-based stats.
Identities = 140/359 (38%), Positives = 201/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLLSLEGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SIHATMAARH--GALFEVEFNDPRPVLDILNAIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLAALREKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A + +I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKSDLIEPFFGDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGYQYKVIDALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQKYRFFSYGDAMFIT 344
>gi|50120058|ref|YP_049225.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pectobacterium atrosepticum SCRI1043]
gi|81645884|sp|Q6D856|QUEA_ERWCT RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|49610584|emb|CAG74029.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pectobacterium atrosepticum SCRI1043]
Length = 355
Score = 446 bits (1149), Expect = e-123, Method: Composition-based stats.
Identities = 138/359 (38%), Positives = 208/359 (57%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ + +DL LN D +V
Sbjct: 1 MRVADFSFELPESLIAHYPQAERSGCRLLSLDGPTGD---LTHGVFTDLLEKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKVS-----GGKLEVLVERVLDDHRILAHVRASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++AT++ + + + + ++ ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SVKATMVARHDA--LFELHFDDSRDVLSILNDIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF +L+ L + GI++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSQRPGAVAAPTAGLHFDEPMLAALRAKGIEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
H+E + A+ + K+RG R+++VGTTS+R LE+A ++D I P+ G T IFI
Sbjct: 226 HAEYAEVPQDVVDAVLACKARGNRVIAVGTTSVRSLESAAQASQDAPIAPFFGDTKIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY +R +D L++NFHLP+STL+MLVSAF G + T Y+ A++ YRF+SYGD +
Sbjct: 286 PGYHYRIIDALVTNFHLPESTLIMLVSAFAGYQNTMSAYREAVAEQYRFFSYGDAMFIT 344
>gi|205351716|ref|YP_002225517.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Gallinarum str. 287/91]
gi|226713850|sp|B5R6Q6|QUEA_SALG2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|205271497|emb|CAR36315.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Gallinarum str. 287/91]
gi|326626749|gb|EGE33092.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Gallinarum str. 9]
Length = 354
Score = 446 bits (1149), Expect = e-123, Method: Composition-based stats.
Identities = 141/359 (39%), Positives = 201/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLLSLEGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SIHATMTARH--GALFEVEFNDPRPVLDILNAIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L GI++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLAALREKGIEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPLFGDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGYQYKVIDALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQKYRFFSYGDAMFIT 344
>gi|295135351|ref|YP_003586027.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Zunongwangia profunda SM-A87]
gi|294983366|gb|ADF53831.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Zunongwangia profunda SM-A87]
Length = 351
Score = 446 bits (1149), Expect = e-123, Method: Composition-based stats.
Identities = 138/361 (38%), Positives = 198/361 (54%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F+F+LPP +A P RD ARLMV++ I DL + + D +V
Sbjct: 3 MKLSNFNFELPPELLAEYPAENRDEARLMVLNRK---EQTIEHKQFKDLIDYFDPEDVMV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + I L ++ + W V P++ I+ G+ L+F
Sbjct: 60 LNNTKVFPARLYGNK----EKTGARIEVFLLRELNAETKLWDVLVDPARKIRIGNKLYFG 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
+ L A VID + L F G + R++ +G PLP YI KR + D
Sbjct: 116 DDE---SLVAEVIDNTTSRGRTLRFLYDGSYEDFRRKLKELGETPLPKYI--KRDVQPED 170
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ +LL RL G+ VTLHVG GTF PV+VED
Sbjct: 171 QERYQTIYAKEEGAVAAPTAGLHFSKHLLKRLEIKGVNFAEVTLHVGLGTFSPVEVEDLS 230
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE F+ +N K+ ++ +VGTT +R+LE++ + + +N + G+TN F
Sbjct: 231 KHKMDSEEAFVKGDAVHTINKAKTEKRKVCAVGTTVMRVLESSVSSNQTLNEFGGWTNKF 290
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH PKSTLLM++SAF G + + Y+ A+ YRFY+YGD L+
Sbjct: 291 IFPPYDFSIANCMVTNFHTPKSTLLMMISAFAGHDFMMRAYEEAVKEKYRFYTYGDAMLI 350
Query: 357 F 357
Sbjct: 351 L 351
>gi|253687413|ref|YP_003016603.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Pectobacterium carotovorum subsp. carotovorum PC1]
gi|259551463|sp|C6DB25|QUEA_PECCP RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|251753991|gb|ACT12067.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Pectobacterium carotovorum subsp. carotovorum PC1]
Length = 355
Score = 446 bits (1149), Expect = e-123, Method: Composition-based stats.
Identities = 137/359 (38%), Positives = 206/359 (57%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ + +DL LN D +V
Sbjct: 1 MRVADFSFELPESLIAHYPQAERSGCRLLSLDGPTGD---LTHGVFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKVS-----GGKLEVLVERVLDDHRVLAHVRASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++AT+ + + + + ++ ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SVKATMAARHDA--LFELHFDDSRDVLSILNDIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF +L+ L GI++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSQRPGAVAAPTAGLHFDEPMLAALREKGIEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
H+E + A+ + K+RG R+++VGTTS+R LE+A +++ I P+ G T IFI
Sbjct: 226 HAEYAEVPQDVVDAVLACKARGNRVIAVGTTSVRSLESAAQASQNAPIEPFFGDTKIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY +R +D L++NFHLP+STL+MLVSAF G + T Y+ A++ YRF+SYGD +
Sbjct: 286 PGYHYRIIDALVTNFHLPESTLIMLVSAFAGYQNTMSAYRQAVAEQYRFFSYGDAMFIT 344
>gi|296840698|ref|ZP_06863236.2| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
polysaccharea ATCC 43768]
gi|296840202|gb|EFH24140.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
polysaccharea ATCC 43768]
Length = 356
Score = 446 bits (1149), Expect = e-123, Method: Composition-based stats.
Identities = 153/360 (42%), Positives = 212/360 (58%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P+ + + D + DLP ++ D +V
Sbjct: 11 MDISDFDFTLPEHLIAQHPPEVRGSSRLLVALPD----MPLQDRVFGDLPDYVGEGDVLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K L F
Sbjct: 67 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDSHTALAHIRSSKSPKPDTKLIF--- 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ +EA ++++ GE+ + S + + G +PLPPYI +R DA D Y
Sbjct: 119 --EGGIEAVMLERV--GELFCLRFNSKQTVYELLEQNGHLPLPPYI--ERAADADDDSRY 172
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G++ VTLHVGAGTF PV+VE ++H M
Sbjct: 173 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGVETAEVTLHVGAGTFQPVRVEKIEEHKM 232
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + T A+ + K+RG ++ +VGTTS+R LE+A E G + G T+IFITPG
Sbjct: 233 HSEWFEVPSETVAAVGAAKARGNKVWAVGTTSMRALESAARETGHLKDGQGDTDIFITPG 292
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRF D L++NFHLPKSTLLMLVSAF G+ + +Y+HA+ YRF+SYGD +L +
Sbjct: 293 YRFNVADRLITNFHLPKSTLLMLVSAFSGMGHIRAVYRHAVEREYRFFSYGDAMILGRNE 352
>gi|269213885|ref|ZP_06158238.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
cinerea ATCC 14685]
gi|269145271|gb|EEZ71689.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
cinerea ATCC 14685]
Length = 356
Score = 446 bits (1149), Expect = e-123, Method: Composition-based stats.
Identities = 153/360 (42%), Positives = 212/360 (58%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P+ + + D + DLP ++ D +V
Sbjct: 11 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPD----MPLQDRVFGDLPDYVGEGDVLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 67 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDSHTALAHIRSSKSPKPGMGLVF--- 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++++ G + + G + + G +PLPPYI +R DA D Y
Sbjct: 119 --EGGIRAVMVER--AGALFCLRFEGGQTVYELLEQNGHLPLPPYI--ERAADADDDSRY 172
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G++ VTLHVGAGTF PV+VE ++H M
Sbjct: 173 QTVYAKYQGAVAAPTAGLHFTEELLLRLKGKGVETAEVTLHVGAGTFQPVRVEKIEEHKM 232
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + T A+ + K+RG ++ +VGTTS+R LE+A E G + G T+IFITPG
Sbjct: 233 HSEWFEVPSETVAAVEAAKARGNKVWAVGTTSMRALESAARETGHLKDGQGDTDIFITPG 292
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRF VD L++NFHLPKSTLLMLVSAF G+ + +Y+HA+ YRF+SYGD +L +
Sbjct: 293 YRFNVVDRLVTNFHLPKSTLLMLVSAFSGMGHIRAVYRHAVEREYRFFSYGDAMILGRNE 352
>gi|167623484|ref|YP_001673778.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
halifaxensis HAW-EB4]
gi|189038879|sp|B0TND3|QUEA_SHEHH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|167353506|gb|ABZ76119.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Shewanella
halifaxensis HAW-EB4]
Length = 345
Score = 446 bits (1149), Expect = e-123, Method: Composition-based stats.
Identities = 136/360 (37%), Positives = 201/360 (55%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N ++D +D+ +N D +V
Sbjct: 1 MRVADFSFELPDELIARYPTAERTASRLLSLDGNSG---ELTDLQFTDILEQVNLGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + + ++ + + + R SK K I+
Sbjct: 58 FNNTRVIPARMFGQK-----QSGGKLEILVERMLDDKRVLAHVRCSKSPKVDSIICL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
E ++ + + + + S + + VG +PLPPYI RP + D Y
Sbjct: 110 --DGGYEMIMVARHDA--LFELELQSDKTILEVLEDVGHMPLPPYI--DRPDEDADKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF +L+ L G+ FVTLHVGAGTF PV+V++ DH M
Sbjct: 164 QTVYNQNPGAVAAPTAGLHFDDAMLAALKDKGVNTAFVTLHVGAGTFQPVRVDNILDHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFITP 299
HSE + + K+RG R+++VGTTS+R LE+A + +SG T+IFI P
Sbjct: 224 HSEWAEVPQNVVDLIAETKTRGNRVIAVGTTSVRSLESAAKASPEQLEAFSGDTDIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY+F+ VD +++NFHLP+STL+ML+SAF G +E K YQHAI+ YRF+SYGD + +K
Sbjct: 284 GYQFQVVDAMVTNFHLPESTLIMLLSAFAGFDEVKNAYQHAIAQKYRFFSYGDAMFVTKK 343
>gi|82542893|ref|YP_406840.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
boydii Sb227]
gi|91207402|sp|Q325J6|QUEA_SHIBS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|81244304|gb|ABB65012.1| probably S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Shigella boydii Sb227]
gi|332098450|gb|EGJ03416.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
boydii 3594-74]
Length = 356
Score = 446 bits (1149), Expect = e-123, Method: Composition-based stats.
Identities = 140/359 (38%), Positives = 204/359 (56%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFFFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SINATMTARH--GALFEVEFNDDRSVLDILNSIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFIT 344
>gi|197248441|ref|YP_002145387.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
gi|226713847|sp|B5EWT8|QUEA_SALA4 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|197212144|gb|ACH49541.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
Length = 354
Score = 446 bits (1148), Expect = e-123, Method: Composition-based stats.
Identities = 140/359 (38%), Positives = 201/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLLSLEGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SIHATMTARH--GALFEVEFNDPRPVLDILNAIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLAALREKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A + +I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKRDLIEPFFGDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGYQYKVIDALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQKYRFFSYGDAMFIT 344
>gi|193068706|ref|ZP_03049667.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli E110019]
gi|192958069|gb|EDV88511.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli E110019]
Length = 356
Score = 446 bits (1148), Expect = e-123, Method: Composition-based stats.
Identities = 140/359 (38%), Positives = 203/359 (56%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGTIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SINATMTARH--GALFEVEFNDDRSVLDILNSIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFIT 344
>gi|310779236|ref|YP_003967569.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Ilyobacter
polytropus DSM 2926]
gi|309748559|gb|ADO83221.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Ilyobacter
polytropus DSM 2926]
Length = 343
Score = 446 bits (1148), Expect = e-123, Method: Composition-based stats.
Identities = 131/356 (36%), Positives = 193/356 (54%), Gaps = 16/356 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ ++D++LP I P PRD +RLM+V+ I ++ L D +V
Sbjct: 4 RLSDYDYNLPEELIGQTPAEPRDHSRLMLVNKKTGD---IEHKRFYNIIDSLKEGDVLVR 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+VI A+L G + + L R N+W +K +K G + +
Sbjct: 61 NSTRVIPARLMGRK-----DTGAILEVFLLKRKDINTWECLIGNAKRLKIGQKVFIGENN 115
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
L A + + G +L F G+ E + +G +PLPPYI+ K + YQ
Sbjct: 116 ---ELVAELKEIKEDGNRILTFDYEGV-FEEILDKLGQMPLPPYISEK----LSEKERYQ 167
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YA SVAAPTAGLHFT +LL ++ G+++ + L VG GTF PV+ ED DH MH
Sbjct: 168 TVYAIKGESVAAPTAGLHFTEDLLEKIREKGVEIADLFLEVGLGTFRPVQTEDVLDHKMH 227
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E + + + +N K G RI++VGTTS+R LE++ E+G + G T+IFI PGY
Sbjct: 228 EETYEVPEKSVEIINRAKEEGRRIIAVGTTSIRTLESSVDENGKLVAGKGTTDIFIYPGY 287
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F+ VD L++NFHLPKSTLLMLVSAF E +Y+ A+ Y+F+S+GD ++
Sbjct: 288 KFKIVDALITNFHLPKSTLLMLVSAFSSRELIMDVYEKAVIKKYQFFSFGDAMFIY 343
>gi|169333983|ref|ZP_02861176.1| hypothetical protein ANASTE_00375 [Anaerofustis stercorihominis DSM
17244]
gi|169258700|gb|EDS72666.1| hypothetical protein ANASTE_00375 [Anaerofustis stercorihominis DSM
17244]
Length = 340
Score = 446 bits (1148), Expect = e-123, Method: Composition-based stats.
Identities = 144/357 (40%), Positives = 205/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD++LP IA P+ RD++RLMVV + I DL +LN D +V
Sbjct: 1 MKTSDFDYNLPEELIAQTPIEKRDTSRLMVVDRDTKK---IKHKHFYDLIEYLNEGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N++KV A+L GV+ +I + ++ N + V +P+K +K G ++ F
Sbjct: 58 LNDSKVFHARLYGVK----EETGAKIETFVLKPLADNMFEVMIKPAKRLKVGSVVKF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L V++K+ G + F ++ I +GT+PLPPYI K D Y
Sbjct: 111 --DENLSMEVLEKYEEGLAKVRF-FGCSDVFSYIDKIGTVPLPPYIKEKLDDD----ERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K +GS AAPTAGLHFT+ LL ++ GI + +VTLHVG GTF PVK ++ +H M
Sbjct: 164 QTVYSKDKGSAAAPTAGLHFTNELLEKIKQKGINICYVTLHVGLGTFRPVKEDEITNHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I TA+ +N K G I +VGTT++R LE+ + G I + TNIFI PG
Sbjct: 224 HSEFFIISNDTAKMINETKKNGKDIYAVGTTTVRTLESCYQKYGDIRATNMDTNIFIYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+A+D L++NFHLPKSTLLML+SAF ++ K Y+ AI YRF+S+GD L+
Sbjct: 284 FEFKAIDHLITNFHLPKSTLLMLISAFYNKDDILKAYKEAIKERYRFFSFGDAMLIL 340
>gi|91977073|ref|YP_569732.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodopseudomonas palustris BisB5]
gi|123721830|sp|Q137A8|QUEA_RHOPS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|91683529|gb|ABE39831.1| Queuosine biosynthesis protein [Rhodopseudomonas palustris BisB5]
Length = 360
Score = 446 bits (1148), Expect = e-123, Method: Composition-based stats.
Identities = 193/363 (53%), Positives = 247/363 (68%), Gaps = 11/363 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDFDLP S IALRPV PRD+AR++VV P + D V DLPA L D +V
Sbjct: 1 MRTELFDFDLPASSIALRPVSPRDAARMLVVRPG----ATLEDRAVRDLPALLQPGDQLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI AQL G R E I TL R+ + W +P+K + +GD++ F
Sbjct: 57 VNDTRVIAAQLTGRRI--GRATEPRIEATLIKRLDGSRWQALVKPAKKLAEGDVVRF-GH 113
Query: 121 DGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
DG+ L+ATV K + GE+ L F+ G L++ I+ +G PLPPYIA KR D +D
Sbjct: 114 DGRVCLLGHLDATVEAKGDAGEVTLAFTFHGPALDQAIAELGATPLPPYIASKRTPDDQD 173
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT +A +G+VAAPTAGLHFT L + L + G+ ++ +TLHVGAGTF+PVKV+DT
Sbjct: 174 AADYQTMFAANEGAVAAPTAGLHFTPELDAALKARGVTLHRLTLHVGAGTFLPVKVDDTA 233
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+H MH+E G I TA ALN+ +++GGRIV+VGTTSLRLLE+A EDG I P++ T IF
Sbjct: 234 EHKMHAEWGTISEATADALNAARAQGGRIVAVGTTSLRLLESAAREDGTIAPFADETAIF 293
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFRAVD LM+NFHLP+STL MLVSAFCG+E + Y+HAI YRFYSYGD SLL
Sbjct: 294 ITPGYRFRAVDALMTNFHLPRSTLFMLVSAFCGLETMQAAYRHAIDSGYRFYSYGDASLL 353
Query: 357 FQK 359
F++
Sbjct: 354 FRE 356
>gi|300715561|ref|YP_003740364.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein QueA) [Erwinia billingiae Eb661]
gi|299061397|emb|CAX58507.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein QueA) [Erwinia billingiae Eb661]
Length = 356
Score = 446 bits (1148), Expect = e-123, Method: Composition-based stats.
Identities = 139/360 (38%), Positives = 204/360 (56%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ ++ +S + +DL L D +V
Sbjct: 1 MRVADFSFELPESLIAHYPQAQRSGCRLLSLN---GPDGELSHGIFTDLLDKLTPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + R SK K G L
Sbjct: 58 FNNTRVIPARVFGRKVS-----GGKIEVLVERMLDDHRVLAHVRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++AT++ + + + + + ++ VG +PLPPYI RP + D Y
Sbjct: 113 E---SVKATMVARHDA--LFELQFDDERAVLDILNAVGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF +L L GI+ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSQRPGAVAAPTAGLHFDQPMLDALREKGIETAFVTLHVGAGTFQPVRVDSIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
H+E + A+ + K+RG R+V+VGTTS+R LE+A +D +I P+ T IFI
Sbjct: 226 HAEYAEVPQDVVDAVLACKARGNRVVAVGTTSVRSLESAAQAAQDALIAPFFDDTKIFIF 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY+++ +D L++NFHLP+STL+MLVSAF G T YQ A++ YRF+SYGD + +
Sbjct: 286 PGYQYQVIDALVTNFHLPESTLIMLVSAFAGYRNTMHAYQQAVAEQYRFFSYGDAMFITR 345
>gi|91209473|ref|YP_539459.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli UTI89]
gi|218557314|ref|YP_002390227.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli S88]
gi|237707601|ref|ZP_04538082.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
sp. 3_2_53FAA]
gi|122424776|sp|Q1RFD6|QUEA_ECOUT RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|226736736|sp|B7MD63|QUEA_ECO45 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|91071047|gb|ABE05928.1| probable S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Escherichia coli UTI89]
gi|218364083|emb|CAR01748.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli S88]
gi|226898811|gb|EEH85070.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
sp. 3_2_53FAA]
gi|307628126|gb|ADN72430.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli UM146]
gi|315289880|gb|EFU49270.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 110-3]
gi|323958598|gb|EGB54301.1| tRNA ribosyltransferase-isomerase [Escherichia coli H263]
Length = 356
Score = 446 bits (1148), Expect = e-123, Method: Composition-based stats.
Identities = 141/359 (39%), Positives = 204/359 (56%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDEKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G IPLPPYI RP + D Y
Sbjct: 113 E---SINATMTARH--GALFEVEFNDDRSVLDILNSIGHIPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFIT 344
>gi|326346059|gb|EGD69798.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O157:H7 str. 1125]
Length = 356
Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats.
Identities = 140/359 (38%), Positives = 204/359 (56%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SINATMTARH--GALFEVEFNDERSVLDILNSIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDELLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFIT 344
>gi|331656459|ref|ZP_08357421.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli TA206]
gi|331054707|gb|EGI26716.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli TA206]
Length = 356
Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats.
Identities = 140/359 (38%), Positives = 204/359 (56%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SINATMTARH--GALFEVEFNDQRSVLDILNSIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDELLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFIT 344
>gi|187732638|ref|YP_001879112.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
boydii CDC 3083-94]
gi|238689510|sp|B2U4K6|QUEA_SHIB3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|187429630|gb|ACD08904.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
boydii CDC 3083-94]
Length = 356
Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats.
Identities = 140/359 (38%), Positives = 204/359 (56%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SINATMTARH--GALFEVEFNDDRSVLDILNSIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQDMVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFIT 344
>gi|261365393|ref|ZP_05978276.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
mucosa ATCC 25996]
gi|288566193|gb|EFC87753.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
mucosa ATCC 25996]
Length = 347
Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats.
Identities = 150/360 (41%), Positives = 213/360 (59%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P+ + + D +LP ++ + D +V
Sbjct: 1 MDISDFDFTLPDQLIAQHPPEVRGSSRLLVALPD----MPLQDRAFGNLPDYIEAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + +I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKES-----GGKIEALIERVLDNHTALAHIRSSKSPKPGTKLIF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++++ + E+ + + + G +PLPPYI R D D Y
Sbjct: 109 --EGDICAVMVERAD--ELFCLRFEGEQTVYELLEQNGHLPLPPYIERAAGAD--DDKRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL + G++ VTLHVGAGTF PV+V+ ++H M
Sbjct: 163 QTVYAKHQGAVAAPTAGLHFTDELLGRLKTKGVETAEVTLHVGAGTFQPVRVDKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + T A+ + +RG ++ +VGTTS+R LE+A E G + G T+IFITPG
Sbjct: 223 HSEWFDVPPETVAAIEAAHARGNKVWAVGTTSMRALESAARETGRLKAGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRFR +D L++NFHLPKSTLLMLVSAF G+E + +Y+HA+ H YRF+SYGD +L +
Sbjct: 283 YRFRVIDRLITNFHLPKSTLLMLVSAFSGMEHIRTVYRHAVEHEYRFFSYGDAMVLGRSE 342
>gi|117622666|ref|YP_851579.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli APEC O1]
gi|166216720|sp|A1A875|QUEA_ECOK1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|115511790|gb|ABI99864.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Escherichia coli APEC O1]
gi|323952983|gb|EGB48851.1| tRNA ribosyltransferase-isomerase [Escherichia coli H252]
Length = 356
Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats.
Identities = 141/359 (39%), Positives = 205/359 (57%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDEKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G IPLPPYI RP + D Y
Sbjct: 113 E---SINATMTARH--GALFEVEFNDDRSVLDILNSIGHIPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + +A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVEAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFIT 344
>gi|87121911|ref|ZP_01077796.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Marinomonas
sp. MED121]
gi|86162709|gb|EAQ63989.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Marinomonas
sp. MED121]
Length = 355
Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats.
Identities = 134/358 (37%), Positives = 206/358 (57%), Gaps = 16/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V ++ FDLP S IA P+ R +RL+ + +S D+ + +N D +V
Sbjct: 1 MRVSDYHFDLPDSLIATYPMPERTGSRLLSLDGPSGD---LSHLDFCDVLSLVNPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + NS + + SK K G + +
Sbjct: 58 FNNTRVIQARMFGQKES-----GGKLEVLVERLLDENSVLAHVKCSKSPKPGSKISLGTD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G++ +A ++ + +T L + + VG +PLPPYI +RP + D Y
Sbjct: 113 QGKT-YQAVMVKRHDTLFELCFDDY----VLDVLEEVGHMPLPPYI--ERPDENSDKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL+ L G+ + FVTLHVGAGTF PV+VE ++H M
Sbjct: 166 QTVYNEKPGAVAAPTAGLHFDEALLNALKEKGVDIAFVTLHVGAGTFQPVRVETLEEHEM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E ++ + K++GGR+++VG+TS+R LE+A ++ G + G T+IFI PG
Sbjct: 226 HAEYVEVEQSVVDKVTQTKAKGGRVIAVGSTSMRSLESA-SQSGQLEMMKGDTSIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y F+ VD +++NFHLP+STL+ML+SAF G ++ YQ AI + YRF+SYGD + +
Sbjct: 285 YEFKTVDAMVTNFHLPESTLIMLISAFAGYQQVMNAYQSAIDNEYRFFSYGDAMFISR 342
>gi|260866563|ref|YP_003232965.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O111:H- str. 11128]
gi|257762919|dbj|BAI34414.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli O111:H- str. 11128]
gi|323178332|gb|EFZ63910.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 1180]
Length = 356
Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats.
Identities = 139/359 (38%), Positives = 204/359 (56%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SINATMTARH--GALFEVEFNDERSVLDILNSIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHI+
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHII 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFIT 344
>gi|120554041|ref|YP_958392.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Marinobacter aquaeolei VT8]
gi|166216731|sp|A1TZN6|QUEA_MARAV RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|120323890|gb|ABM18205.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Marinobacter aquaeolei VT8]
Length = 366
Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats.
Identities = 145/361 (40%), Positives = 207/361 (57%), Gaps = 20/361 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R ++RL+ + + +DLP L D +V
Sbjct: 1 MNVSDFHFDLPDELIARYPLKERSASRLLSLDGLSGQT---THLKFTDLPDLLQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK K+G L +
Sbjct: 58 FNNTRVIPARLFGQKE-----TGGKVEILVERLLGEKELLAHTRSSKSPKEGQRLLL--E 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVD 179
DG + ++ + + L F G E + +G +PLPPY+ +R + D
Sbjct: 111 DGAAL---RMLARKDA---LFHFVYEGDEAFLDVLERIGHMPLPPYM--EREDEQSDRER 162
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK G+VAAPTAGLHF +LS L + GI+ +VTLHVGAGTF PV+V+ +DH+
Sbjct: 163 YQTVYAKEAGAVAAPTAGLHFDDVVLSALKAKGIEFAYVTLHVGAGTFQPVRVDKIEDHV 222
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSEI + T +A+N ++RGGR+V+VGTTS+R LE+A+ G + + G T+IFI P
Sbjct: 223 MHSEIAHVPEETVKAVNEARARGGRVVAVGTTSVRSLESASRA-GRLQEFRGDTDIFIYP 281
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GYRF+ VD +++NFHLP+STL+MLVSAF G Y+ A+ YRF+SYGD L +
Sbjct: 282 GYRFQTVDAMITNFHLPESTLIMLVSAFAGYNNIMSAYREAVEQKYRFFSYGDAMFLTAQ 341
Query: 360 R 360
Sbjct: 342 E 342
>gi|168261167|ref|ZP_02683140.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Hadar str. RI_05P066]
gi|200390136|ref|ZP_03216747.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Virchow str. SL491]
gi|199602581|gb|EDZ01127.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Virchow str. SL491]
gi|205350104|gb|EDZ36735.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Hadar str. RI_05P066]
Length = 354
Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats.
Identities = 141/359 (39%), Positives = 200/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLLSLEGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SIHATMTARH--GALFEVEFNDPRPVLDILNAIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L GI++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLAALREKGIEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K RG R+++VGTTS+R LE+A + +I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLAAKVRGNRVIAVGTTSVRSLESAAQAAKSDLIEPFFGDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGYQYKVIDALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQKYRFFSYGDAMFIT 344
>gi|26246410|ref|NP_752449.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli CFT073]
gi|227884587|ref|ZP_04002392.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 83972]
gi|300988043|ref|ZP_07178523.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 45-1]
gi|301049605|ref|ZP_07196556.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 185-1]
gi|29427792|sp|Q8FKC5|QUEA_ECOL6 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|26106808|gb|AAN78993.1|AE016756_176 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli CFT073]
gi|227838673|gb|EEJ49139.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli 83972]
gi|300298598|gb|EFJ54983.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 185-1]
gi|300407595|gb|EFJ91133.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 45-1]
gi|307552310|gb|ADN45085.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli ABU 83972]
gi|315294216|gb|EFU53567.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 153-1]
Length = 356
Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats.
Identities = 140/359 (38%), Positives = 203/359 (56%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SINATMTARH--GALFEVEFNDQRSVLDILNSIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPLFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFIT 344
>gi|325127517|gb|EGC50443.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis N1568]
Length = 346
Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats.
Identities = 150/360 (41%), Positives = 208/360 (57%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P+ + + D + DLP ++ + D +V
Sbjct: 1 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPD----MPLQDRVFGDLPDYVEAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDSHTALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 109 --EGGIRAVMVGR--EGELFCLRFEGGETVYELLEQNGHLPLPPYI--ERAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF P++V+ ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPMRVDKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + T A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 223 HSEWFEVPSETVAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRF D L++NFHLPKSTLLMLVSAF G+ + Y+HA+ YRF+SYGD +L +
Sbjct: 283 YRFNVADRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRHAVEREYRFFSYGDAMILGRNE 342
>gi|313888442|ref|ZP_07822109.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Peptoniphilus harei ACS-146-V-Sch2b]
gi|312845471|gb|EFR32865.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Peptoniphilus harei ACS-146-V-Sch2b]
Length = 339
Score = 445 bits (1146), Expect = e-123, Method: Composition-based stats.
Identities = 147/356 (41%), Positives = 203/356 (57%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M K+F +DLP IA P RD +RL+V+ + D+ +L D +V
Sbjct: 1 MKTKDFYYDLPKELIAQHPEEKRDHSRLLVLDKESG---EMEHKHFYDIIDYLKKGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A++ G R +E++I L R + W ++P K K G + F
Sbjct: 58 LNDTKVMPARIYGHR----EGKEEKIEFLLLNR-KDDIWECLSKPGKKAKIGSKIIF--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+L A V+D G L F GI E + +G +PLPPYI K D Y
Sbjct: 110 --SDKLSAEVVDISEDGSRFLKFEYDGI-FEEILDELGEMPLPPYITEK----LEDKNRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +GS AAPTAGLHFT LL +L G+++ ++TLHVG GTF PVKVE+ D+H M
Sbjct: 163 QTVYAREEGSAAAPTAGLHFTKELLEKLKDKGVEICYITLHVGLGTFRPVKVENVDEHEM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A +N+ K RG R+++VGTTS+R +E+ EDG + SGFTNIFI P
Sbjct: 223 HSEFYVMTKEVADKINAAKDRGSRVIAVGTTSVRTVESIANEDGRVCEKSGFTNIFIYPP 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLP+STLLMLVS+ E K Y+ A+ YRF+S+GD +
Sbjct: 283 YKFKCVDALITNFHLPESTLLMLVSSLSSREIILKAYEEAVKERYRFFSFGDAMFI 338
>gi|150024349|ref|YP_001295175.1| S-adenosylmethionine:tRNA-ribosyltransferase-iso merase
[Flavobacterium psychrophilum JIP02/86]
gi|166216722|sp|A6GW82|QUEA_FLAPJ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|149770890|emb|CAL42355.1| S-adenosylmethionine:tRNA-ribosyltransferase-iso merase
[Flavobacterium psychrophilum JIP02/86]
Length = 349
Score = 445 bits (1146), Expect = e-123, Method: Composition-based stats.
Identities = 140/361 (38%), Positives = 196/361 (54%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F F+LP +A P RD +RLMVV+ I + D+ + + D +V
Sbjct: 1 MKLSHFQFNLPDELLAEYPAENRDESRLMVVNRAKGT---IEHKMFKDVLDYFDEGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 LNNTKVFPARLYGNK----EKTGARIEVFLLRELNAEQRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D L A VID + L F G E +++ +G P+P YI R + D
Sbjct: 114 DDD---SLVAEVIDNTTSRGRTLRFLYDGSYEEFRNKLTELGETPIPKYI--SREVTPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ +L+ RL GI+ VTLHVG GTF PV+VED
Sbjct: 169 AERYQTIYAKEEGAVAAPTAGLHFSKHLMKRLEIKGIQFAEVTLHVGLGTFNPVEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I +N+ K R RI +VGTTS+R +E++ + +NP+ G+TN F
Sbjct: 229 KHKMDSEELKITQEACDIVNAAKERKSRICAVGTTSMRAIESSVSSARTLNPYDGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P + F +++NFH PKSTL+M++SAFCG + K+ Y AI Y+FYSYGD L+
Sbjct: 289 IFPPHDFSLATCMITNFHTPKSTLMMMISAFCGHDLMKEAYAEAIKEKYKFYSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|270263540|ref|ZP_06191809.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Serratia
odorifera 4Rx13]
gi|270042424|gb|EFA15519.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Serratia
odorifera 4Rx13]
Length = 356
Score = 445 bits (1146), Expect = e-123, Method: Composition-based stats.
Identities = 140/360 (38%), Positives = 211/360 (58%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ + +DL L + D +V
Sbjct: 1 MRVADFSFELPESLIAHYPQPERSGCRLLQLDGPSGA---LTHGVFTDLLDNLEAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + R SK K G L
Sbjct: 58 FNNTRVIPARMFGRKVS-----GGKIEVLVERVLDDHRVLAHVRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT++ + +T + + ++ ++ VG +PLPPYI RP + D Y
Sbjct: 113 E---SVAATMVARHDT--LFELRFNDERDVFTILNAVGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L + GI++ FVTLHVGAGTF PV+VE ++H+M
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLAALRAKGIEMAFVTLHVGAGTFQPVRVETIEEHVM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
H+E + A+ + K+RG R+V+VGTTS+R LE+A ++D +I P+ G T+IFI
Sbjct: 226 HAEYAEVPQEVVDAVLACKARGKRVVAVGTTSVRSLESAANASKDALIAPFFGDTSIFIF 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ +D L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD + +
Sbjct: 286 PGYHYQVIDALVTNFHLPESTLIMLVSAFAGYKNTMHAYQQAVAEQYRFFSYGDAMFISR 345
>gi|70732299|ref|YP_262055.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
fluorescens Pf-5]
gi|91207394|sp|Q4K6S8|QUEA_PSEF5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|68346598|gb|AAY94204.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
fluorescens Pf-5]
Length = 354
Score = 445 bits (1146), Expect = e-123, Method: Composition-based stats.
Identities = 144/358 (40%), Positives = 202/358 (56%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R +RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRGSRLLTLDGPTGA---LAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRSSKSPKPGSKILI--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
EA ++ + +T L E+ + VG +PLPPYI RP + D Y
Sbjct: 110 --DGGGEAEMLARHDT----LFELGFAEEVLPLLDRVGHMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAQRLGAVAAPTAGLHFDQPLLEAIAAKGVETAFVTLHVGAGTFQPVRVERIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A+ + ++RGGR+V+VGTTS+R LE+A DG++ P+SG T+IFI PG
Sbjct: 222 HHEWLEVGQDVVDAVAACRARGGRVVAVGTTSVRSLESAAR-DGVLKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y+ A+ + YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYRAAVENGYRFFSYGDAMFITR 338
>gi|37527761|ref|NP_931106.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Photorhabdus luminescens subsp. laumondii TTO1]
gi|46576913|sp|Q7N0I3|QUEA_PHOLL RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|36787197|emb|CAE16277.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queuosine
biosynthesis protein QueA) [Photorhabdus luminescens
subsp. laumondii TTO1]
Length = 355
Score = 445 bits (1146), Expect = e-123, Method: Composition-based stats.
Identities = 137/360 (38%), Positives = 206/360 (57%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R RL+ + ++ + +D+ LN+ D +V
Sbjct: 1 MRVSDFTFELPDEMIAHYPQPQRSGCRLLSLDGETGA---LTHGIFTDVLDKLNAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + + R SK K+G L
Sbjct: 58 FNNTRVIPARIFGRKA-----TGGKLEVLVERVLDDKRVLAHVRASKAPKEGTELLLGDN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ L+AT++ + +T + + ++ + +G +PLPPYI RP + D Y
Sbjct: 113 E---SLKATMLARHDT--LFEIRFDDERDVLSILDDIGHMPLPPYIN--RPDEEADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL L G+++ FVTLHVGAGTF PV+VE +DHIM
Sbjct: 166 QTVYSERPGAVAAPTAGLHFDEPLLEALRKKGVEMVFVTLHVGAGTFQPVRVETIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT--EDGIINPWSGFTNIFIT 298
H+E + A+ + K+RG ++V+VGTTS+R LE+A +D +I P+ T IFI
Sbjct: 226 HAEYAEVPQDVVDAVLACKARGNKVVAVGTTSVRSLESAAKACQDELIAPFFNDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ ++ VD L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD + +
Sbjct: 286 PGFEYQVVDALITNFHLPESTLIMLVSAFAGYKNTMNAYQEAVAEKYRFFSYGDAMFIRR 345
>gi|329767260|ref|ZP_08258787.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Gemella
haemolysans M341]
gi|328836927|gb|EGF86574.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Gemella
haemolysans M341]
Length = 342
Score = 445 bits (1146), Expect = e-123, Method: Composition-based stats.
Identities = 146/358 (40%), Positives = 207/358 (57%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++FDF LP IA P+ RD+++L+ V + SD+ + N D +V
Sbjct: 1 MKLEQFDFYLPEELIAQTPLLKRDTSKLLCVDRK---NNTHEHKVFSDIIDYFNPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + I L + N W +P+K IK+G I+ F
Sbjct: 58 LNNTRVMPARLYGAK----KDTGAAIEVLLLKNLGHNDWECLVKPAKRIKEGSIVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +EA + G F GI + +++ +GT+PLPPYI + D Y
Sbjct: 111 -GDGIMEAVCTKVLDDGFRHFEFVYEGI-FQERLNELGTMPLPPYIKERLT----DKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT+ LL R+ G+ + ++TLHVG GTF PV VE+ +DH M
Sbjct: 165 QTVYSKEVGSSAAPTAGLHFTNELLDRIKEKGVNIAYLTLHVGLGTFRPVAVENIEDHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE +D TA+ +N K GR+ SVGTT+ R LET A +G I SG+TNIFI P
Sbjct: 225 HSEYYTLDEKTAELINKTKENEGRVFSVGTTTTRTLETIARDNNGKIVAASGWTNIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
G+ F+ VD L++NFHLPKS+L+MLVSAF E+ ++Y A+ + YRF+S+GD ++
Sbjct: 285 GFEFKCVDGLITNFHLPKSSLIMLVSAFYDREKVIELYNIAVENKYRFFSFGDAMIII 342
>gi|294493624|gb|ADE92380.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli IHE3034]
Length = 356
Score = 445 bits (1146), Expect = e-123, Method: Composition-based stats.
Identities = 141/360 (39%), Positives = 203/360 (56%), Gaps = 19/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDEKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIEL-ERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ + AT+ + L + L ++ +G IPLPPYI RP + D
Sbjct: 113 E---SINATMTARHGA---LFEVEFNDDRLVLDILNSIGHIPLPPYI--DRPDEDADREL 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHI
Sbjct: 165 YQTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHI 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFI 297
MHSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 225 MHSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFI 284
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 285 YPGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFIT 344
>gi|300214785|gb|ADJ79201.1| S-adenosylmethionine tRNA ribosyltransferase-isomerase
[Lactobacillus salivarius CECT 5713]
Length = 347
Score = 445 bits (1146), Expect = e-123, Method: Composition-based stats.
Identities = 136/357 (38%), Positives = 199/357 (55%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++FD+DLP S IA P+ RD +R++++ D ++ LN DA+V
Sbjct: 6 LTTEDFDYDLPESLIAQTPLEERDQSRMLILDSKTG---EYQDDYFYNVIDQLNPGDALV 62
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+++V+ A++ GV+ + L + W +P++ K G + F
Sbjct: 63 MNDSRVMPARIYGVK----PETGGHVEVLLLNNTHGDEWETLVKPARRAKVGTKISF--- 115
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+ATV + G L+ F GI + +G +P PPYI K Y
Sbjct: 116 -GDGALKATVTKELEHGGRLIEFEYDGI-FMEILDKLGEMPSPPYIKEKLEN----PEMY 169
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ GS AAPTAGLHFT LL ++ G+K+ ++TLHVG GTF PV ++ +DH M
Sbjct: 170 QTVYSREVGSAAAPTAGLHFTKELLHKIEEKGVKLVYLTLHVGLGTFRPVSEKNIEDHKM 229
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A LN V+ GGRIV+ GTTS+R LET T+ +G I SG+T+IFI P
Sbjct: 230 HSEFYRLTEEAAATLNEVRKNGGRIVATGTTSIRTLETIGTKYNGEIKADSGWTDIFIKP 289
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY ++ V ++NFHLPKSTL+MLV++F G E Y+HA+ YRF+S+GD +
Sbjct: 290 GYEWKVVQAFITNFHLPKSTLVMLVASFTGRENILNAYKHAVEEKYRFFSFGDAMFI 346
>gi|257465430|ref|ZP_05629801.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus minor 202]
gi|257451090|gb|EEV25133.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus minor 202]
Length = 363
Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats.
Identities = 141/362 (38%), Positives = 203/362 (56%), Gaps = 18/362 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +F FDLP + IA P+ R ++RL+ ++ +D +DL L+ D +V
Sbjct: 1 MLVSDFHFDLPDNLIARYPMPDRTASRLLYLNGETG---EFADQHFTDLLDHLHEGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K+G L F
Sbjct: 58 FNNTRVIPARLYGQKIS-----GGKVEALIERVLDEHRCLAHVRASKAPKEGTQLIFGED 112
Query: 121 DGQSR--LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
L AT+ + +T + + S L + G +PLPPYI RP + D
Sbjct: 113 KLGEGNGLVATMAARHDT--LFELHFESQTNLFDLLQSAGHMPLPPYI--DRPDEDADQE 168
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y+K+ G+VAAPTAGLHF + +L +L G+ FVTLHVGAGTF PV+VE+ DH
Sbjct: 169 RYQTVYSKVLGAVAAPTAGLHFDNVMLEKLKEKGVNTAFVTLHVGAGTFQPVRVENILDH 228
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTN 294
MH+E + + K+ G R+++VGTTS+R +E+A D +I P+ T+
Sbjct: 229 KMHAEYAEVSQDVVDKILETKANGKRVIAVGTTSVRSIESAAQAVKNSDTLIEPFFSDTS 288
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PG F+ VD L++NFHLP+STL+MLVSAF G + T YQHA+ YRF+SYGD
Sbjct: 289 IFIYPGKTFKVVDALVTNFHLPESTLIMLVSAFAGYKNTMNAYQHAVESQYRFFSYGDAM 348
Query: 355 LL 356
+
Sbjct: 349 FI 350
>gi|240949619|ref|ZP_04753954.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus minor NM305]
gi|240295877|gb|EER46553.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus minor NM305]
Length = 363
Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats.
Identities = 141/362 (38%), Positives = 204/362 (56%), Gaps = 18/362 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +F FDLP + IA P+ R ++RL+ ++ +D +DL L+ D +V
Sbjct: 1 MLVSDFHFDLPDNLIARYPMPDRSASRLLYLNGETG---EFADQHFTDLLEHLHEGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K+G L F
Sbjct: 58 FNNTRVIPARLYGRKIS-----GGKVEALIERVLDEHRCLAHVRASKAPKEGTQLIFGED 112
Query: 121 DGQSR--LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
L AT+ + +T + + S L + G +PLPPYI RP + D
Sbjct: 113 KLGEGNGLVATMAARHDT--LFELHFESQNNLFDLLQSAGHMPLPPYI--DRPDEDADQE 168
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y+K+ G+VAAPTAGLHF + +L +L G+ FVTLHVGAGTF PV+VE+ DH
Sbjct: 169 RYQTVYSKVLGAVAAPTAGLHFDNTMLEKLKEKGVNTAFVTLHVGAGTFQPVRVENILDH 228
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTN 294
MH+E + + K++G R+++VGTTS+R +E+A D +I P+ T+
Sbjct: 229 KMHAEYAEVSQDVVDKILETKAKGKRVIAVGTTSVRSIESAAQAVKNSDTLIEPFFSDTS 288
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PG F+ VD L++NFHLP+STL+MLVSAF G + T YQHA+ YRF+SYGD
Sbjct: 289 IFIYPGKTFKVVDALVTNFHLPESTLIMLVSAFAGYKNTMNAYQHAVESQYRFFSYGDAM 348
Query: 355 LL 356
+
Sbjct: 349 FI 350
>gi|269121052|ref|YP_003309229.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase [Sebaldella
termitidis ATCC 33386]
gi|268614930|gb|ACZ09298.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase [Sebaldella
termitidis ATCC 33386]
Length = 339
Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats.
Identities = 141/357 (39%), Positives = 201/357 (56%), Gaps = 18/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP + IA + PRD ++LMV+ N VI ++ +L D +V
Sbjct: 1 MKLSDFDFDLPDNLIAQSAMEPRDHSKLMVLEKNKQ---VIEHKKFYNISDYLKKGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N T+VI A+L G + + C L R+ N+W V +P+K +K G L F
Sbjct: 58 VNRTRVIPARLFGKKDTGSI-----LECFLLKRIDLNTWEVLLKPAKKLKIGQKLVFL-- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ +LEA + + + G +L F G E + +G +PLPPYI + +D Y
Sbjct: 111 --EGKLEAVLKEVKDDGNRILEFIYEG-NFEEILDELGEMPLPPYITEQ----LKDKNRY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK SVAAPTAGLHFT+ LL +L G+++ + L VG GTF PV+ E+ +H M
Sbjct: 164 QTVYAKEGESVAAPTAGLHFTNELLEKLKDSGVELTEIYLDVGLGTFRPVQTENILEHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I +A+ +N K G RI++VGTT++R LE+ + + G T+IFI
Sbjct: 224 HHEKYHIPEESAEIINRAKREGRRIIAVGTTTVRTLES-SNNGAEVISGDGETDIFIYGD 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ VD L++NFHLPKSTLLML+SAF G Y+ AI YRFYS+GD ++
Sbjct: 283 YKFKIVDALITNFHLPKSTLLMLISAFAGKNFIFTAYETAIQEKYRFYSFGDAMFIY 339
>gi|225848048|ref|YP_002728211.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sulfurihydrogenibium azorense Az-Fu1]
gi|225643657|gb|ACN98707.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sulfurihydrogenibium azorense Az-Fu1]
Length = 336
Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats.
Identities = 133/357 (37%), Positives = 187/357 (52%), Gaps = 21/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+ LP IA PV PRDS RLMV++ I + D+ +L D +V
Sbjct: 1 MKLSDFDYHLPKELIAKYPVEPRDSCRLMVLNREKKS---IEHRVFRDIVDYLQEGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + + I L V N W + + +K D +
Sbjct: 58 LNDTKVIPARLIGKK----EKTGANIEVFLLKPVEDNIWEALIKNVRRLKPKDKIVVAQD 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
++ E ++ + +++ + G IPLPPYI +RP + +D Y
Sbjct: 114 --------FFVEFLERQEDKVIVKLHSKDIKEDLEKYGHIPLPPYI--ERPDEEKDKQLY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +AK +GSVA+PTAGLHFT LL ++ G+ + ++TLHVG GTF PVK ED H M
Sbjct: 164 QTVFAKKEGSVASPTAGLHFTEELLKKVKDKGVNITYITLHVGLGTFKPVKEEDITKHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I + + K G +++VGTT +R LE+ GFT+IFI P
Sbjct: 224 HEEFYSIPKESLDLIEKTKESGKSVIAVGTTVVRTLESFVLTGKT----EGFTDIFIYPP 279
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+ VD L++NFHLPKSTLLMLVSAF + K Y A+ YRF+SYGD +
Sbjct: 280 FEFKIVDKLITNFHLPKSTLLMLVSAFASKDFILKAYNEAVKQKYRFFSYGDAMFII 336
>gi|51102975|gb|AAT96122.1| QueA [Pseudomonas viridiflava]
Length = 354
Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats.
Identities = 146/358 (40%), Positives = 201/358 (56%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP S IA P+ R S+RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFDLPDSLIARHPLAERRSSRLLTLDGVSGA---LAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRASKSPKPGSSILI--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
EA ++ + + L E+ + VG +PLPPYI RP + D Y
Sbjct: 110 --DGGGEAEMVARHDALFELRFAE----EVLPLLDRVGHMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDQPLLEAIAAKGVETTFVTLHVGAGTFQPVRVEQIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + A+ + + RGGR+++VGTTS+R LE+A DG++ P+SG T+IFI PG
Sbjct: 222 HTEWLEVGQDVVDAVAACRERGGRVIAVGTTSVRSLESAAR-DGVLKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFSYGDAMFITR 338
>gi|290474706|ref|YP_003467586.1| S-adenosylmethionine:tRNA (m6t6A37) ribosyltransferase-isomerase
[Xenorhabdus bovienii SS-2004]
gi|289174019|emb|CBJ80806.1| S-adenosylmethionine:tRNA (m6t6A37) ribosyltransferase-isomerase
[Xenorhabdus bovienii SS-2004]
Length = 355
Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats.
Identities = 136/360 (37%), Positives = 207/360 (57%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R RL+ + ++ + +D+ L + D +V
Sbjct: 1 MRVADFTFELPEELIAHYPQPQRSGCRLLALDGKTGG---LTHGIFTDVLDKLEAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK +K+G L
Sbjct: 58 FNNTRVIPARLFGRKA-----TGGKLEVLVERMLDNKRVLAHVRASKALKEGAELLLGED 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT++ + +T + + ++ + +G +PLPPYIA RP + D Y
Sbjct: 113 E---SIRATMLARHDT--LFEIRFDDDRDVLTILDEIGHMPLPPYIA--RPDEESDRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L G+ + FVTLHVGAGTF PV+VE +DHIM
Sbjct: 166 QTVYSERPGAVAAPTAGLHFDEPLLAALREKGVDMAFVTLHVGAGTFQPVRVETIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT--EDGIINPWSGFTNIFIT 298
H+E + A+ + K+RG ++V+VGTTS+R LE+A ++G+I P+ T IFI
Sbjct: 226 HAEYAEVPQNVVDAVLACKARGNKVVAVGTTSVRSLESAARACQNGLIEPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ ++ VD L++NFHLP+STL+MLVSAF G + T Y+ A++ YRF+SYGD + +
Sbjct: 286 PGFEYQVVDALITNFHLPESTLIMLVSAFAGYQNTMNAYKEAVAEKYRFFSYGDAMFIHR 345
>gi|299133970|ref|ZP_07027164.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Afipia sp.
1NLS2]
gi|298591806|gb|EFI52007.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Afipia sp.
1NLS2]
Length = 361
Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats.
Identities = 190/360 (52%), Positives = 241/360 (66%), Gaps = 9/360 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M FDFDLPP IALRPV PR+SARL+VV P + D+ V DLP L + D +V
Sbjct: 1 MRTDLFDFDLPPESIALRPVEPRESARLLVVRPGDG----LDDYTVRDLPDLLRAGDQLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI AQL G R E I TL RV + W RP++ + +GD++ F ++
Sbjct: 57 VNDTKVIAAQLAGRRV--GGATEPRIDVTLIKRVDGSRWQALVRPARKLAEGDVVRFGNE 114
Query: 121 D---GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+ATV K GEI L F+ G L++ I+ +G PLPPYIA +R D +D
Sbjct: 115 GRVCLLGNLDATVEAKGEAGEITLSFAFHGPVLDQAIADLGAPPLPPYIASRRAPDEKDV 174
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT +AK +G+VAAPTAGLHFT L + L + GI V +TLHVGAGTF+PVK +DT D
Sbjct: 175 GDYQTMFAKHEGAVAAPTAGLHFTPALEAALQARGIGVQRLTLHVGAGTFLPVKTDDTAD 234
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+E G I A TA+ LN +++GGRIV+VG+T++RLLE+A E+G I P++G T IFI
Sbjct: 235 HKMHAEWGTISAETARTLNEARAKGGRIVAVGSTAMRLLESAADENGTIQPFTGETAIFI 294
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFRAVD++M+NFHLP+STL MLVSAF G+E + Y HAI YRFYSYGD LLF
Sbjct: 295 TPGYRFRAVDVMMTNFHLPRSTLFMLVSAFSGLETMQAAYAHAIEKGYRFYSYGDACLLF 354
>gi|90424090|ref|YP_532460.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodopseudomonas palustris BisB18]
gi|90106104|gb|ABD88141.1| Queuosine biosynthesis protein [Rhodopseudomonas palustris BisB18]
Length = 379
Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats.
Identities = 189/362 (52%), Positives = 246/362 (67%), Gaps = 11/362 (3%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
FDF+LP + IALRP PRD+ARL+VV P + D +V DLP +L DA+V N
Sbjct: 24 TDLFDFELPATAIALRPAQPRDAARLLVVRPG----AALHDGVVRDLPDWLAPGDALVVN 79
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+VI AQL+G R E +I TL R+ + W + +K + +GD++ F DG
Sbjct: 80 DTRVIAAQLSGRRI--GRDSEAKIEATLIKRLDGSRWQALVKGAKKLNEGDVVRF-GHDG 136
Query: 123 Q----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ +L+ATV K GEI L FS G L++ I+ +G PLPPYIA KR D RD
Sbjct: 137 RVCLLGQLDATVEHKGEAGEITLSFSFHGPTLDQAIAELGAPPLPPYIASKRAPDDRDAA 196
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A +G+VAAPTAGLHFT L + L + G+ ++ VTLHVGAGTF+PVKV+DT+DH
Sbjct: 197 DYQTMFAAHEGAVAAPTAGLHFTPELEAALAARGVSIHRVTLHVGAGTFLPVKVDDTEDH 256
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G I TA ALN+V ++G RIV+VG+TSLRLLE+A +DG I P++ T IFIT
Sbjct: 257 KMHAEWGTISRATADALNAVHAKGCRIVAVGSTSLRLLESAAADDGSIQPFADDTAIFIT 316
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGYRF+AVD++M+NFHLP+STL MLVSAF G E ++ Y HAI+ YRFYSYGD LLF
Sbjct: 317 PGYRFKAVDLMMTNFHLPRSTLFMLVSAFAGRETMQRAYAHAIATGYRFYSYGDACLLFP 376
Query: 359 KR 360
+R
Sbjct: 377 ER 378
>gi|83647164|ref|YP_435599.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Hahella
chejuensis KCTC 2396]
gi|123531953|sp|Q2SDV0|QUEA_HAHCH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|83635207|gb|ABC31174.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Hahella
chejuensis KCTC 2396]
Length = 351
Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats.
Identities = 150/360 (41%), Positives = 205/360 (56%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDF+LPP IA RP+ R S+RL+ + I+ DL +N D +V
Sbjct: 1 MRVDDFDFELPPELIARRPLAERSSSRLLCLDAETG---EINHRGFKDLLGMVNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + R ++ + VS + R SK K G +
Sbjct: 58 FNDTRVIPARLFGQK-----RSGGKVEVMVERVVSMTEMLAHVRASKAPKPGVEILI--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ T++++ G++ + G + + G +PLPPYI R D D Y
Sbjct: 110 --EENYVLTMVER--EGDLFRLRVSQGGSVSELLERCGHMPLPPYI--DREDDLSDRERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL + G++ FVTLHVGAGTF PV+V+ DH M
Sbjct: 164 QTVYSRQPGAVAAPTAGLHFDEALLLAMSQKGVETAFVTLHVGAGTFQPVRVDVVQDHQM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A + + VK+ GGR+V+VGTT++R LETA+ G I P++G T+IFI PG
Sbjct: 224 HSEYLEVSADVCERVRQVKAAGGRVVAVGTTAVRALETASRS-GSIEPYAGDTSIFIYPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
Y F VD L++NFHLPKSTLLMLVSAF G E YQ AI YRF+SYGD L +++
Sbjct: 283 YEFVTVDALVTNFHLPKSTLLMLVSAFAGREHILAAYQEAIEQRYRFFSYGDAMFLHRRQ 342
>gi|290967873|ref|ZP_06559423.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Megasphaera
genomosp. type_1 str. 28L]
gi|290782012|gb|EFD94590.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Megasphaera
genomosp. type_1 str. 28L]
Length = 339
Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats.
Identities = 143/356 (40%), Positives = 209/356 (58%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F ++LP IA P PRD ARLMV ++ DL A L+ D +V
Sbjct: 1 MKLSDFSYELPKELIAQHPAEPRDHARLMVYDKITGA---VAHRYFYDLAAELHKGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+++VI A+L+G + ++ L V + W V +P K G + F
Sbjct: 58 FNDSRVIPARLHGKK----KETGGKVEVLLLTPVGEDCWEVLVKPGKKALPGTTIEF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
SRL ATV ++ + G ++ F G+ + + +G +PLPPYI K Y
Sbjct: 111 --SSRLCATVKERTDFGGRIVQFHYDGV-FDEILDQIGEMPLPPYIHEKMKNPDE----Y 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +GS AAPTAGLHFT NL+ ++ + G++ FVTLHVG GTF PV+ E+ +DH M
Sbjct: 164 QTVYARERGSAAAPTAGLHFTRNLMEKIRAKGVETVFVTLHVGLGTFRPVEEENVEDHEM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A A+N K+ G R+V+VGTTS+R LE+A ++G++ SG+T+IFI PG
Sbjct: 224 HSEFYSVTPAAAAAVNRAKAEGRRVVAVGTTSIRTLESA-GKEGVVQAGSGWTDIFIYPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y +R D L++NFHLP+STLLML+SA E+ + Y+ A++ YRF+S+GD +
Sbjct: 283 YTYRIADALVTNFHLPESTLLMLISAMSKREKILQAYRIAVAEGYRFFSFGDAMFI 338
>gi|253990965|ref|YP_003042321.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949]
gi|253782415|emb|CAQ85579.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Photorhabdus asymbiotica]
Length = 355
Score = 445 bits (1144), Expect = e-123, Method: Composition-based stats.
Identities = 138/360 (38%), Positives = 209/360 (58%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R S RL+ + ++ + +D+ LN+ D +V
Sbjct: 1 MRVSDFTFELPDEMIARYPQPQRSSCRLLSLDGATGA---LTHGVFTDVLNKLNAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + + R SK K+G L
Sbjct: 58 FNNTRVIPARIFGRKV-----TGGKLEVLVERILDDKRVLAHVRASKAPKEGTELLLGDN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++AT++ + +T + + ++ + VG +PLPPYI RP + D Y
Sbjct: 113 E---SIKATMLARHDT--LFEIRFDDERDVLSILDDVGHMPLPPYI--DRPDEEADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L G+++ FVTLHVGAGTF PV+VE +DH+M
Sbjct: 166 QTVYSERPGAVAAPTAGLHFDEPLLNALREKGVEMVFVTLHVGAGTFQPVRVETIEDHVM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT--EDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG ++V+VGTTS+R LE+A +DG+I P+ T IFI
Sbjct: 226 HSEYAEVPQNVVDAVLACKARGNKVVAVGTTSVRSLESAAAACKDGLIAPFFDDTRIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ ++ VD L++NFHLP+STL+MLVSAF G + T Y+ A++ YRF+SYGD + +
Sbjct: 286 PGFEYQIVDALITNFHLPESTLIMLVSAFAGYKNTMNAYKEAVAEKYRFFSYGDAMFIHR 345
>gi|332042759|gb|EGI78959.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Lacinutrix
algicola 5H-3-7-4]
Length = 354
Score = 445 bits (1144), Expect = e-123, Method: Composition-based stats.
Identities = 138/361 (38%), Positives = 193/361 (53%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F+FDLP +A P RD +RLMV++ I DL + + D ++
Sbjct: 6 MKLSHFNFDLPEELLAEYPSENRDESRLMVLNRK---EQTIEHKQFKDLIDYFDEEDVMI 62
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 63 LNNTKVFPARLFGNK----EKTGARIEVFLLRELNEEQRLWDVLVDPARKIRIGNKLYFG 118
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
+ L A VID + L F G E ++ +G PLP YI KR ++ D
Sbjct: 119 DDE---SLVAEVIDNTTSRGRTLRFLYDGSYKEFRNKLKELGETPLPKYI--KRDVEPED 173
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT +AK +G+VAAPTAG+HF+ +LL RL GI VTLHVG GTF PV+VED
Sbjct: 174 EDRYQTIFAKNEGAVAAPTAGMHFSKHLLKRLEIKGIDFAEVTLHVGLGTFNPVEVEDLS 233
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I T + +N RI +VGTT++R +E+A + +N G+TN F
Sbjct: 234 KHKMDSEEVTIGPKTVERINRALKDKKRICAVGTTAMRAVESAVSSSNTLNEIDGWTNKF 293
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH PKSTLLM+ SAF G + K+ Y+ A+ Y+FYSYGD L+
Sbjct: 294 IFPPYDFSIANCMITNFHTPKSTLLMMASAFAGHDFIKRAYEEAVKEKYKFYSYGDAMLI 353
Query: 357 F 357
Sbjct: 354 I 354
>gi|194445819|ref|YP_002039645.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Newport str. SL254]
gi|238693537|sp|B4SWP5|QUEA_SALNS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|194404482|gb|ACF64704.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Newport str. SL254]
Length = 354
Score = 445 bits (1144), Expect = e-123, Method: Composition-based stats.
Identities = 140/359 (38%), Positives = 199/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLLSLEGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SIHATMTARH--GALFEVEFNDPRPVLDILNAIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLAALREKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ K RG R+++VGTTS+R LE+A + +I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLVAKVRGNRVIAVGTTSVRSLESAAQAAKSDLIEPFFGDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGYQYKVIDALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQKYRFFSYGDAMFIT 344
>gi|298492038|ref|YP_003722215.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase ['Nostoc
azollae' 0708]
gi|298233956|gb|ADI65092.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase ['Nostoc
azollae' 0708]
Length = 372
Score = 445 bits (1144), Expect = e-123, Method: Composition-based stats.
Identities = 153/368 (41%), Positives = 211/368 (57%), Gaps = 23/368 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVH-PNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +D++LPP IA P PRD++RL+VV+ PN+ + +H+ DLP L D +V
Sbjct: 15 LSGYDYELPPELIAQNPAVPRDTSRLLVVNSPNIGEEIPALNHIFRDLPDLLQPGDLLVM 74
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNTKV+ A+L G + E+ L PN W +P K K G + F
Sbjct: 75 NNTKVMPARLYGRKL-----TGAEVEVLLLEEKQPNCWLALVKPGKHFKVGTKIIFGGNK 129
Query: 122 ----------GQSRLEATVIDK-WNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARK 169
L A V+DK TG LL F + L + + G IPLPPYI
Sbjct: 130 LGRAKHPATTNDDELMAIVVDKDTATGGRLLQFDLPEYRSLVQVLENFGEIPLPPYITGS 189
Query: 170 RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
D + YQT YA+ G++AAPTAGLHFT LL +L + GI F+TLHVG GTF P
Sbjct: 190 TAADEQ----YQTVYAQQTGAIAAPTAGLHFTPELLEKLRARGINQAFLTLHVGVGTFRP 245
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPW 289
V+VED H MHSE +++ T + + + K+ GGRI+++GTT +R LE A + G + P+
Sbjct: 246 VEVEDVTTHQMHSEWIEVNSATVEEIRATKAAGGRIIAIGTTVVRALEGAA-QSGDLQPY 304
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
G N+FI PGY+++ V+ L++NFHLP+S+LLMLVSA G E K+YQ AI+ YRFYS
Sbjct: 305 VGKVNLFIYPGYQWQVVEGLITNFHLPRSSLLMLVSALIGRERLLKIYQQAIASQYRFYS 364
Query: 350 YGDTSLLF 357
+GD L+
Sbjct: 365 FGDAMLIL 372
>gi|225023925|ref|ZP_03713117.1| hypothetical protein EIKCOROL_00791 [Eikenella corrodens ATCC
23834]
gi|224943399|gb|EEG24608.1| hypothetical protein EIKCOROL_00791 [Eikenella corrodens ATCC
23834]
Length = 343
Score = 445 bits (1144), Expect = e-123, Method: Composition-based stats.
Identities = 150/360 (41%), Positives = 208/360 (57%), Gaps = 19/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA +P R S+RL+ + ++ D L ++LP L + D +V
Sbjct: 1 MQLADFDFHLPEHLIAQQPPEQRGSSRLL----DARSGDLLCDRLFAELPNLLEAGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + + + R SK K G +L F
Sbjct: 57 FNNTKVMKARLFGHKAS-----GGRIEALIERVLDEHCALAHIRSSKSPKPGSLLEF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A + ++ GE+ + + + + + G +PLPPYI +R DA D Y
Sbjct: 109 --DGGIRAQMEER--EGELFKLRFSGSLNVYQILEQTGRLPLPPYI--ERAADAADDERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL++L + GI +TLHVGAGTF PV+ E+ +H M
Sbjct: 163 QTIYAKHQGAVAAPTAGLHFTPELLNQLQANGIHRAEITLHVGAGTFQPVRSENIVEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I T +A+ K+ G R+ +VGTTS+R LE A ++ + G T+IFITPG
Sbjct: 223 HKEWYSIPTETVEAIAETKANGKRVWAVGTTSMRSLEAAA-QNSHLQAGEGDTDIFITPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRF+ D L++NFHLPKSTLLMLVSAF G+E + Y+HAI YRF+SYGD LL +
Sbjct: 282 YRFQVADGLITNFHLPKSTLLMLVSAFSGVEHIRAAYRHAIEQQYRFFSYGDAMLLTRAE 341
>gi|310766809|gb|ADP11759.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Erwinia sp.
Ejp617]
Length = 358
Score = 445 bits (1144), Expect = e-123, Method: Composition-based stats.
Identities = 137/360 (38%), Positives = 206/360 (57%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ ++ ++ + +DL LN D +V
Sbjct: 3 MRVADFTFELPESLIAHYPQTQRSGCRLLSLNGPDGA---LTHGVFTDLLHKLNPGDLLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + R SK + G L
Sbjct: 60 FNNTRVIPARIFGRKVS-----GGKIEVLVERMLDEKRVLAHVRSSKAPRPGSELLLGDD 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++AT++ + + + + + ++ +G +PLPPYI RP + D Y
Sbjct: 115 E---NVQATMLARHDA--LFEIKFNDARPVLDILNSIGHMPLPPYI--DRPDEDADRELY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL L GI+ FVTLHVGAGTF PV+V+ ++HIM
Sbjct: 168 QTVYSQKPGAVAAPTAGLHFDEPLLEALREKGIETAFVTLHVGAGTFQPVRVDTIEEHIM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
H+E + +A+ + K+RG R+++VGTTS+R LE+A E+ +I P+ G T IFI
Sbjct: 228 HAEYAEVPQDVVEAVLACKARGKRVIAVGTTSVRSLESAAQAAENALIAPFFGDTKIFIY 287
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ +D L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD + +
Sbjct: 288 PGYHYQVIDALVTNFHLPESTLIMLVSAFAGYQNTMHAYQQAVAEQYRFFSYGDAMFITR 347
>gi|313884160|ref|ZP_07817926.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Eremococcus
coleocola ACS-139-V-Col8]
gi|312620607|gb|EFR32030.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Eremococcus
coleocola ACS-139-V-Col8]
Length = 344
Score = 444 bits (1143), Expect = e-123, Method: Composition-based stats.
Identities = 142/360 (39%), Positives = 208/360 (57%), Gaps = 19/360 (5%)
Query: 1 MMVK--EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDA 58
M + +FD++LP IA P+ R S+RL+V+ + + D + +L + D
Sbjct: 1 MTLSTKDFDYELPEELIAQTPLKDRSSSRLLVIDRHTD---QLMDTDFKHILDYLQAGDG 57
Query: 59 IVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
+V N T+VI A++ G + + L N W +P++ K G + F
Sbjct: 58 LVVNETRVIPARIIGTK----PETGGHLEVLLLHNREGNEWETLVKPARRAKVGTKISF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
GQ +L A V ++ + G ++ F G+ LE + +G +PLPPYI K D
Sbjct: 113 ---GQGQLTAIVKEELDHGGRIIEFDYQGVFLE-ILEELGQMPLPPYIKEK----LNDPD 164
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YAK GS AAPTAGLHFT LL + GI++ + LHVG GTF PV V++ +DH
Sbjct: 165 RYQTVYAKENGSAAAPTAGLHFTPELLEAAKAKGIEIIPLVLHVGLGTFRPVSVDNIEDH 224
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFI 297
MH+E + +AQA+N +K+ GG+I +VGTTS+R LET + + +G + SG+T+IFI
Sbjct: 225 DMHAEFYQLSDQSAQAINRIKAAGGKITAVGTTSVRTLETISHKFEGKLVADSGWTSIFI 284
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPG+ ++ VD L++NFHLP+STL+MLVSAF E+ Y HA+ YRF+S+GD LL
Sbjct: 285 TPGFDYQVVDHLITNFHLPQSTLVMLVSAFYDREKILAAYDHAVKEKYRFFSFGDAMLLL 344
>gi|324016689|gb|EGB85908.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli MS 117-3]
Length = 356
Score = 444 bits (1143), Expect = e-123, Method: Composition-based stats.
Identities = 139/359 (38%), Positives = 203/359 (56%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SINATMTARH--GALFEVEFNDERSVLDILNSIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++ GTTS+R LE+A ++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLAAKARGNRVIAGGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFIT 344
>gi|319953715|ref|YP_004164982.1| s-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Cellulophaga algicola DSM 14237]
gi|319422375|gb|ADV49484.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Cellulophaga algicola DSM 14237]
Length = 349
Score = 444 bits (1143), Expect = e-123, Method: Composition-based stats.
Identities = 145/361 (40%), Positives = 200/361 (55%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F+F+LP +A P RD ++LMV+H I + D+ + + D +V
Sbjct: 1 MKLSGFNFELPEELLAEYPAENRDESKLMVIHRETGK---IEHKMFKDMINYFDEGDVMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 LNNTKVFPARLYGNK----EKTGARIEVFLLRELNEEQRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D L A VID + L F G + R++ +G PLP YI KR +A D
Sbjct: 114 DDD---TLVAEVIDNTTSRGRTLRFLYDGSYTDFRRKLKELGDTPLPKYI--KRETEAED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ +LL RL GI +TLHVG GTF PV+VED
Sbjct: 169 AERYQTIYAKHEGAVAAPTAGLHFSKHLLKRLEIKGIDFAELTLHVGLGTFNPVEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE ID T + +N+ K RI ++GTT++R LE+ + +N + G+TN F
Sbjct: 229 KHKMDSEELIIDEKTTEIVNNAKKNKKRICAIGTTAMRGLESGVSSQHTLNTFEGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFHLPKSTLLM+VSAF G + KK Y+ AI Y+FYSYGD L+
Sbjct: 289 IFPPYDFSIANCMVTNFHLPKSTLLMMVSAFMGHDLMKKAYKEAILEGYKFYSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|149908740|ref|ZP_01897401.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Moritella
sp. PE36]
gi|149808282|gb|EDM68221.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Moritella
sp. PE36]
Length = 349
Score = 444 bits (1143), Expect = e-123, Method: Composition-based stats.
Identities = 135/363 (37%), Positives = 201/363 (55%), Gaps = 21/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+F LP IA P R S+RL+ ++ N + D +D+ + + D +V
Sbjct: 1 MQVSDFNFSLPDELIARYPKADRRSSRLLQLNGNSG---ELVDKQFADILDLVEAGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + +S +S + R SK K G L
Sbjct: 58 FNNTRVIPARMYGQKAS-----GGKIEVLVERVISDHSVLAHVRSSKSPKVGAQLIL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++A +I + + + + + + + +G +PLPPYI RP + D Y
Sbjct: 110 --EGTVKAEMIARHDA--LFELKFLDERHVLEILEDIGHMPLPPYI--DRPDEDSDKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL L + FVTLHVGAGTF PV+V++ DH M
Sbjct: 164 QTVYNEKPGAVAAPTAGLHFDEALLVELAEKDVNTAFVTLHVGAGTFQPVRVDNILDHHM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT----TEDGIINPWSGFTNIF 296
HSE + + K+ GGR+++VGTTS+R LE+A + + P+ T IF
Sbjct: 224 HSEYAEVSEEVVAKIAETKANGGRVIAVGTTSVRSLESAAQATMAKGLPLAPFFEDTEIF 283
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+F+ VD +++NFHLP+STL+ML+SAF G + YQHAI+ YRF+SYGD +
Sbjct: 284 IYPGYKFQLVDAMITNFHLPESTLIMLLSAFAGYDHVMPAYQHAIAEKYRFFSYGDAMFV 343
Query: 357 FQK 359
++
Sbjct: 344 TKQ 346
>gi|92117315|ref|YP_577044.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Nitrobacter
hamburgensis X14]
gi|91800209|gb|ABE62584.1| Queuosine biosynthesis protein [Nitrobacter hamburgensis X14]
Length = 365
Score = 444 bits (1143), Expect = e-123, Method: Composition-based stats.
Identities = 191/361 (52%), Positives = 239/361 (66%), Gaps = 9/361 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M FDF+LP IALRP PRDSAR++VV P + D VSDLP +L D +V
Sbjct: 6 MRTDLFDFELPSESIALRPASPRDSARMLVVQPGAG----LHDQRVSDLPKWLRPGDQLV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI AQL G R E I TL R+ + W+ +P++ + GDI+ F ++
Sbjct: 62 VNDTRVIAAQLRGRRI--GRDAEPRIEATLIKRLDGSRWNALVKPARKLIAGDIVRFGNE 119
Query: 121 D---GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+A V K GE+ FS G L++ I+ +G+ PLPPYIA KR D RD
Sbjct: 120 GRVCFLGHLDAQVESKGEEGEVTFAFSFHGPTLDQAIADLGSPPLPPYIASKREPDDRDV 179
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT +A +G+VAAPTAGLHFT + + L G+ ++ +TLHVGAGTF+PVK EDT
Sbjct: 180 ADYQTMFAVHEGAVAAPTAGLHFTPAVEAVLRERGVGLHRLTLHVGAGTFLPVKTEDTVG 239
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MHSE G I A TA ALN+ ++ GGRIV+VGTTSLRLLE+AT +DG I P++G T IFI
Sbjct: 240 HRMHSEWGTISAETADALNAARASGGRIVAVGTTSLRLLESATADDGRIAPFTGETAIFI 299
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFRAVDILM+NFHLP+STL MLVSAF G+E K+ Y HAI+ YRFYSYGD LLF
Sbjct: 300 TPGYRFRAVDILMTNFHLPRSTLFMLVSAFSGLETMKQAYAHAIAAGYRFYSYGDACLLF 359
Query: 358 Q 358
Sbjct: 360 P 360
>gi|110680196|ref|YP_683203.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseobacter
denitrificans OCh 114]
gi|123172304|sp|Q164S6|QUEA_ROSDO RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|109456312|gb|ABG32517.1| S-adenosylmethionine [Roseobacter denitrificans OCh 114]
Length = 351
Score = 444 bits (1143), Expect = e-123, Method: Composition-based stats.
Identities = 170/362 (46%), Positives = 225/362 (62%), Gaps = 14/362 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RP PR SARL+V ISD +VSDLP +L+ D +V
Sbjct: 1 MKLSDFDFDLPEDLIATRPAVPRTSARLLVAKGR-----QISDSIVSDLPNWLSPGDRLV 55
Query: 61 FNNTKVITAQLNGVRF--CHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L G R + I TL + +WS +P K +K + + F
Sbjct: 56 LNDTRVIPARLTGARHRDTAQGPMQARIEVTLLEPDAQGNWSALIKPLKKVKIAEEIIF- 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
RL AT+ + G+ +L F++ G + + ++ G +PLPPYIA +RP D RD
Sbjct: 115 ----SDRLRATLRAVKD-GQGVLQFNLEGDDFDAALNAAGAMPLPPYIATRRPADERDKS 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LLS L + G+ +VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVFAQNSGAVAAPTASLHFDKALLSELAARGVLFSYVTLHVGAGTFLPVKVEDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A A +N+ K G R++ VGTT+LRL+ETA E G I W G T+IFI
Sbjct: 230 KMHAEWGQVSAAAAAEINATKQAGKRVIPVGTTALRLIETAGRE-GQIKAWEGDTDIFIY 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+RF D LM+NFHLPKSTL+MLVSA G +E + +Y HA++ YRF+SYGD SLL
Sbjct: 289 PGFRFNVADALMTNFHLPKSTLMMLVSALMGYDEVRAIYDHAVAEKYRFFSYGDASLLIP 348
Query: 359 KR 360
+R
Sbjct: 349 QR 350
>gi|320173777|gb|EFW48960.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
dysenteriae CDC 74-1112]
Length = 356
Score = 444 bits (1143), Expect = e-123, Method: Composition-based stats.
Identities = 140/359 (38%), Positives = 204/359 (56%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTYGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SINATMTARH--GALFEVEFNDDRSVLDILNSIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFIT 344
>gi|292487435|ref|YP_003530307.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Erwinia
amylovora CFBP1430]
gi|292898676|ref|YP_003538045.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Erwinia
amylovora ATCC 49946]
gi|291198524|emb|CBJ45632.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Erwinia
amylovora ATCC 49946]
gi|291552854|emb|CBA19899.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Erwinia
amylovora CFBP1430]
gi|312171537|emb|CBX79795.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Erwinia
amylovora ATCC BAA-2158]
Length = 356
Score = 444 bits (1143), Expect = e-123, Method: Composition-based stats.
Identities = 140/361 (38%), Positives = 205/361 (56%), Gaps = 19/361 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ ++ ++ + +DL LN D +V
Sbjct: 1 MRVADFTFELPESLIAHYPQAQRSGCRLLSLNGPDGA---LTHGVFTDLLHQLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARIFGRKAS-----GGKIEVLVERMLDEKRVLAHVRSSKAPKPGSELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ ++A ++ + +T L + + ++ +G +PLPPYI RP + D
Sbjct: 113 E---SVQAIMVARHDT---LFEIEFNDARPVLDILNSIGHMPLPPYI--DRPDEDADREL 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y++ G+VAAPTAGLHF LL L GI+ FVTLHVGAGTF PV+V+ +DHI
Sbjct: 165 YQTVYSQKPGAVAAPTAGLHFDEPLLEALREKGIETVFVTLHVGAGTFQPVRVDTIEDHI 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFI 297
MH+E + A+ + K+RG R+++VGTTS+R LE+A E+ +I P+ G T IFI
Sbjct: 225 MHAEYAEVPQDVVDAVLACKARGKRVIAVGTTSVRSLESAAQAAENALIAPFFGDTKIFI 284
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY ++ +D L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD +
Sbjct: 285 YPGYHYQVIDALVTNFHLPESTLIMLVSAFAGYQHTMHAYQQAVAQRYRFFSYGDAMFIT 344
Query: 358 Q 358
+
Sbjct: 345 R 345
>gi|77460843|ref|YP_350350.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
fluorescens Pf0-1]
gi|91207396|sp|Q3K795|QUEA_PSEPF RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|77384846|gb|ABA76359.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
fluorescens Pf0-1]
Length = 349
Score = 444 bits (1143), Expect = e-123, Method: Composition-based stats.
Identities = 141/358 (39%), Positives = 201/358 (56%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R +RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRGSRLLTLDGVSGA---LAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDTHRVLAHVRSSKSPKPGSKILI--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
EA ++ + + L E+ + VG +PLPPYI RP + D Y
Sbjct: 110 --DGGGEAEMLARHDA----LFELGFAEEVLPLLDRVGHMPLPPYI--DRPDEGSDRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF L+ + + G++ FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAEKLGAVAAPTAGLHFDQTLMEAISAKGVETAFVTLHVGAGTFQPVRVEKIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + A+ + + RGGR+++VGTTS+R LE+A DG++ P+SG T+IFI PG
Sbjct: 222 HTEWLEVGQDVVDAVAACRERGGRVIAVGTTSVRSLESAAR-DGVLKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y+ A+ + YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYKAAVDNGYRFFSYGDAMFITR 338
>gi|126668566|ref|ZP_01739520.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Marinobacter sp. ELB17]
gi|126626971|gb|EAZ97614.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Marinobacter sp. ELB17]
Length = 369
Score = 444 bits (1143), Expect = e-123, Method: Composition-based stats.
Identities = 143/360 (39%), Positives = 200/360 (55%), Gaps = 20/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P+ R ++RL + ++ +DLP L D +V
Sbjct: 1 MNVSDFRFDLPDELIARYPLSERSASRLFCLDGLSGD---MNHRRFTDLPDLLQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L G + + + + R SK K G +
Sbjct: 58 FNNTKVIPARLFGKKE-----TGGSVEILVERITGDQQMLAHVRASKSPKPGQQVLLEDG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVD 179
T ++ + L G E L + +G +PLPPYI R +A D
Sbjct: 113 --------TALNVIARADALFELQADGSESLLDILDRLGHMPLPPYI--DRADEASDRER 162
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ G+VAAPTAGLHF LL +L ++G+ FVTLHVGAGTF PV+V+ +DH+
Sbjct: 163 YQTVYAREAGAVAAPTAGLHFDEALLQKLAAMGVDSTFVTLHVGAGTFQPVRVDKLEDHV 222
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH E+ + T A+ ++RGGR+++VGTTS+R LE+A+ G + P++G T+IFI P
Sbjct: 223 MHHELVHVRQDTVDAVARTRARGGRVIAVGTTSVRSLESASRH-GALRPFTGDTDIFIYP 281
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY F+AVD L++NFHLP+STL+MLVSAF G E Y+ A+ YRF+SYGD + +
Sbjct: 282 GYSFQAVDALITNFHLPESTLIMLVSAFAGYENVMGAYKEAVREGYRFFSYGDAMFITGQ 341
>gi|329298298|ref|ZP_08255634.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Plautia
stali symbiont]
Length = 356
Score = 444 bits (1143), Expect = e-123, Method: Composition-based stats.
Identities = 140/361 (38%), Positives = 206/361 (57%), Gaps = 19/361 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ + +D+ LN D +V
Sbjct: 1 MRVADFAFELPESLIAHYPQAQRSGCRLLSLDGPSGA---LNHGVFTDVLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARVYGRKAS-----GGKIEMLVERMLDDKRVLAHVRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ ++AT++ + + L + + ++ VG +PLPPYI RP + D
Sbjct: 113 E---SVKATMVARHDA---LFEIEFADDRAVLDILNSVGHMPLPPYI--DRPDEEADREL 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y+ G+VAAPTAGLHF LL+ L + G+++ FVTLHVGA TF PV+VE+ +DHI
Sbjct: 165 YQTVYSARPGAVAAPTAGLHFDEPLLAALKAKGVEMAFVTLHVGASTFQPVRVENINDHI 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT--EDGIINPWSGFTNIFI 297
MHSE + A+ + K+RG ++V+VGTTS+R LE+A +DG+I P+ T IFI
Sbjct: 225 MHSEYAEVPQDVVDAVQACKARGNKVVAVGTTSVRSLESAAQACQDGLIAPFFDDTQIFI 284
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY ++ +D L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD +
Sbjct: 285 YPGYHYQVIDALITNFHLPESTLIMLVSAFAGYQHTMAAYQSAVAEQYRFFSYGDAMYIT 344
Query: 358 Q 358
+
Sbjct: 345 R 345
>gi|90407016|ref|ZP_01215206.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Psychromonas sp. CNPT3]
gi|90311887|gb|EAS39982.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Psychromonas sp. CNPT3]
Length = 348
Score = 444 bits (1143), Expect = e-123, Method: Composition-based stats.
Identities = 133/363 (36%), Positives = 200/363 (55%), Gaps = 20/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F LP IA P R ++RL+ + N + ++ + +D ++
Sbjct: 1 MKVADFSFQLPEQLIARYPTPERSASRLLSLEGNSG---QLQHLHFHNILDLIKKDDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G++ +I + + + + R SK K G L
Sbjct: 58 FNDTRVIPARLFGIKA----ETGGKIEVLVERVLDEKRFLAHVRSSKSPKPGCKLLL--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
++ ++A ++ + G + + + + +G +PLPPYI RP + D Y
Sbjct: 111 --ENSIDAVMVKR--EGPLFEIQIDHPTSVLEVLESIGHMPLPPYI--DRPDEDADKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y K G+VAAPTAGLHF +L +L + GI FVTLHVGAGTF PVKV++ DH M
Sbjct: 165 QTVYNKNPGAVAAPTAGLHFDQAILDKLQAKGIDFAFVTLHVGAGTFQPVKVDNILDHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT----TEDGIINPWSGFTNIF 296
HSE+ + + + K+RGGRI++VGTTS+R +E+A + + P+ T+IF
Sbjct: 225 HSELAQVSQQVIDKIIAAKARGGRIIAVGTTSVRSIESAAKASIGQGLALAPYCAETDIF 284
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+F+ +D +++NFHL +STLLMLVSAF G + YQ AI YRF+SYGD +
Sbjct: 285 IYPGYKFQLIDAMLTNFHLSESTLLMLVSAFAGKDNIDNAYQQAIKEEYRFFSYGDAMFI 344
Query: 357 FQK 359
+K
Sbjct: 345 TKK 347
>gi|325677716|ref|ZP_08157368.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Ruminococcus albus 8]
gi|324110684|gb|EGC04848.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Ruminococcus albus 8]
Length = 355
Score = 444 bits (1142), Expect = e-122, Method: Composition-based stats.
Identities = 132/359 (36%), Positives = 190/359 (52%), Gaps = 16/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ PR+++R++ + + +L L D +V
Sbjct: 7 MKKSDFYYDLPQELIAQTPIEPRNASRMLCLDRYTG---EVGHDHFYNLCDHLRKGDLLV 63
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+++V+ A++ G I L + W + RP K + G F
Sbjct: 64 LNDSRVLPARIYG----ETEDTHSFIEFLLVEQRGNLEWEILCRPGKKARVGRRFVF--- 116
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISG-IELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G L A + + G + F L + +G +PLPPYI K +D
Sbjct: 117 -GGGLLRAEITEVLEDGNRIARFECDDSTNLFAALDEIGQMPLPPYITEK----LKDKER 171
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y+ GS AAPTAGLHFT L+ + ++G+ + +VTLHVG GTF PVK + DH
Sbjct: 172 YQTVYSNEIGSSAAPTAGLHFTKEQLADIEAMGVNIAYVTLHVGLGTFRPVKEDRVLDHK 231
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH E + A TA+ +N KS GGR+++VGTTS R LE+ G I P GFT IFI P
Sbjct: 232 MHREHYELPARTAELINKTKSEGGRVIAVGTTSCRTLESVAALYGDIRPCDGFTEIFIYP 291
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
G+ F+ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+S+GD+ +
Sbjct: 292 GFEFKVLDGLITNFHLPESTLIMLVSAFAGYDNTMNAYKIAVEEKYRFFSFGDSMFIAP 350
>gi|306821137|ref|ZP_07454753.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Eubacterium
yurii subsp. margaretiae ATCC 43715]
gi|304550830|gb|EFM38805.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Eubacterium
yurii subsp. margaretiae ATCC 43715]
Length = 344
Score = 444 bits (1142), Expect = e-122, Method: Composition-based stats.
Identities = 144/356 (40%), Positives = 215/356 (60%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +EF +DLP IA P+ R S++L++++ + ++ +L+ ND +V
Sbjct: 1 MKTEEFFYDLPERLIAQTPLKDRSSSKLLLLNKESGNTK---HEIFKNIIDYLDKNDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+V+ A+L G++ + L R S W V +P+K +KKG + F
Sbjct: 58 FNNTRVLPARLYGLK----KDTGANVEILLLKRYSMKKWQVLVKPAKRLKKGSTVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L T++++++ G + FS G+ E IS +G +PLPPYI K +D Y
Sbjct: 111 -GEDLLLMTILEEYDEGIRDVEFSYEGV-FEDIISQIGFMPLPPYIKEK----LQDKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+KI GS AAPTAGLHFT L++ L G+++ ++TLHVG GTF PVK E+ DH+M
Sbjct: 165 QTIYSKINGSSAAPTAGLHFTKELIASLEEKGVQIEYLTLHVGLGTFRPVKAEEVTDHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ID TAQ LN K G +I++VGTT++R LE+A D I+ T+IFI P
Sbjct: 225 HSEHYVIDEDTAQRLNKAKKEGKKIIAVGTTTVRTLESAVNRDNILEKLEDDTSIFIYPP 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+ VD +++NFHLP+STL+M++SAF G ++ Y+ AI + YRF+S+GD+ +
Sbjct: 285 YDFKFVDSIITNFHLPQSTLIMMISAFAGKDKVFNAYKVAIENEYRFFSFGDSMFI 340
>gi|62179016|ref|YP_215433.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|75484605|sp|Q57SF9|QUEA_SALCH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|62126649|gb|AAX64352.1| S-adenosylmethionine-tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|322713475|gb|EFZ05046.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Choleraesuis str. A50]
Length = 354
Score = 444 bits (1142), Expect = e-122, Method: Composition-based stats.
Identities = 139/359 (38%), Positives = 200/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLLSLEGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLP YI RP + D Y
Sbjct: 113 E---SIHATMTARH--GALFEVEFNDPRPVLDILNAIGHMPLPQYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLAALREKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A + +I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKSDLIEPFFGDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGYQYKVIDALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQKYRFFSYGDAMFIT 344
>gi|229824011|ref|ZP_04450080.1| hypothetical protein GCWU000282_01315 [Catonella morbi ATCC 51271]
gi|229786365|gb|EEP22479.1| hypothetical protein GCWU000282_01315 [Catonella morbi ATCC 51271]
Length = 344
Score = 444 bits (1142), Expect = e-122, Method: Composition-based stats.
Identities = 143/358 (39%), Positives = 204/358 (56%), Gaps = 16/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ K+FD+ LP IA P+ R ++RL+V+ D + FLN DA+V
Sbjct: 2 LTTKDFDYHLPEHLIAQTPLADRAASRLLVLDRQTGRK---QDLHFDQIINFLNPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N T+VI A+L G++ + L N W +P++ K G + F
Sbjct: 59 VNETRVIPARLFGIK----PETGGHLEVLLLNNTQGNQWECLIKPARRAKTGTQIVFGE- 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
RL ATV+ + + G ++ FS G+ LE + +G +PLPPYI + D Y
Sbjct: 114 --DGRLTATVVSEGDHGGRIIEFSYEGVFLE-ILESLGQMPLPPYIKER----LEDADRY 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + + G+++ + LHVG GTF PV + +DH M
Sbjct: 167 QTVYAKENGSAAAPTAGLHFTDELLEAIKAKGVEIIPLVLHVGLGTFRPVSADSIEDHEM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + +A A+ +V++RGG+I +VGTTS+R LET A DG + SG+T IFI+P
Sbjct: 227 HAEYYQLSQESADAIQAVQARGGKIFAVGTTSVRTLETIAAKFDGQVRADSGWTQIFISP 286
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
G+ F+ VD L++NFHLP STL+MLVSAF E Y+HA+ YRF+S+GD+ L+
Sbjct: 287 GFEFKVVDHLITNFHLPCSTLVMLVSAFYNREAVLAAYEHAVEAEYRFFSFGDSMLIL 344
>gi|204926792|ref|ZP_03217994.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Javiana str.
GA_MM04042433]
gi|204323457|gb|EDZ08652.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Javiana str.
GA_MM04042433]
Length = 354
Score = 444 bits (1142), Expect = e-122, Method: Composition-based stats.
Identities = 140/359 (38%), Positives = 201/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLLSLEGPTGA---LTHGTFTDLLDKLNLGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SIHATMTARH--GALFEVEFNDPRPVLDILNAIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLAALREKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A + +I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKSDLIEPFFGDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 PGYQYKVIDALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQKYRFFSYGDAMFIT 344
>gi|295398599|ref|ZP_06808631.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Aerococcus
viridans ATCC 11563]
gi|294973200|gb|EFG48995.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Aerococcus
viridans ATCC 11563]
Length = 374
Score = 444 bits (1142), Expect = e-122, Method: Composition-based stats.
Identities = 139/357 (38%), Positives = 198/357 (55%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +FDFDLP IA P+ R +++L+ + D D+ + L + D +V
Sbjct: 3 LTTNDFDFDLPEELIAQVPIQDRLASKLLKLDAQTGD---FQDGHFPDVASELEAGDVLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G+R I L + W +P++ I+ G + F
Sbjct: 60 LNNTRVLPARLQGIR----PDTGGHIEVLLLNNTEGDKWETLVKPARRIRVGTEIVF--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L A V + G ++ F +GI LE + +G +PLPPYI K Y
Sbjct: 113 -GNGQLVAVVTEVLEHGGRIVEFKYNGIFLE-VLEALGEMPLPPYIKEKLDNPD----RY 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT ++ L G+++ ++TLHVG GTF PV V+D D H M
Sbjct: 167 QTVYAKENGSAAAPTAGLHFTEEFMADLKDRGVEIAYLTLHVGLGTFRPVSVDDIDAHKM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE +D A + + G ++++VGTTS+R LET T+ G + SG+T+IFI P
Sbjct: 227 HSEFYRLDQENAAKIRRAQEGGHKVIAVGTTSIRTLETIGTKFKGQVQADSGWTDIFIAP 286
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F V+ ++NFHLPKSTL+MLVSAF G + YQHA+ YRF+S+GD L
Sbjct: 287 GYQFSVVEGFITNFHLPKSTLIMLVSAFAGRDHVLAAYQHAVEEKYRFFSFGDAMFL 343
>gi|119508835|ref|ZP_01627987.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Nodularia
spumigena CCY9414]
gi|119466364|gb|EAW47249.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Nodularia
spumigena CCY9414]
Length = 384
Score = 444 bits (1142), Expect = e-122, Method: Composition-based stats.
Identities = 151/364 (41%), Positives = 204/364 (56%), Gaps = 18/364 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVH-PNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +++ LP IA PVFPRDS+RL+VV+ P + DLP L + D ++
Sbjct: 31 LAGYNYTLPTELIAQNPVFPRDSSRLLVVNSPTTGTQTAPLHQIFRDLPELLRTGDLLII 90
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKVI A+L G + E+ L N W +P K K G + F +
Sbjct: 91 NDTKVIPARLYGRK-----STGAEVEVLLLEERQYNCWLALVKPGKRFKPGTKIIFPPRG 145
Query: 122 GQSR-----LEATVIDKWN-TGEILLVFSI-SGIELERQISLVGTIPLPPYIARKRPIDA 174
S+ L ATVID TG LL F + G L + G IPLPPYI D
Sbjct: 146 KDSQPLPTELSATVIDTDPATGGRLLRFDVPEGKPLVEVLDQFGEIPLPPYITASTAADE 205
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
+ YQT YA+ G++AAPTAGLHFT LL +L GI +TLHVG GTF PV++ED
Sbjct: 206 Q----YQTVYAQQPGAIAAPTAGLHFTPELLKKLGDRGINQASITLHVGIGTFRPVEIED 261
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
H MH E + T + + + K+ GGRI++VGTT++R LE A + G + + G T+
Sbjct: 262 VTSHQMHEEWISVPPATVEQIRATKAAGGRIIAVGTTAVRALEGAA-KSGDLQTFCGKTD 320
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
+FI PGY +R VD L++NFHLP+S+LLMLVSA G E +YQ AI+ YRFYS+GD
Sbjct: 321 LFIYPGYEWRVVDGLITNFHLPRSSLLMLVSALIGRERLLSIYQEAIALKYRFYSFGDAM 380
Query: 355 LLFQ 358
L+ +
Sbjct: 381 LILR 384
>gi|188534665|ref|YP_001908462.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Erwinia
tasmaniensis Et1/99]
gi|238689699|sp|B2VHQ4|QUEA_ERWT9 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|188029707|emb|CAO97586.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein QueA) [Erwinia tasmaniensis Et1/99]
Length = 355
Score = 444 bits (1142), Expect = e-122, Method: Composition-based stats.
Identities = 141/361 (39%), Positives = 208/361 (57%), Gaps = 19/361 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ ++ + ++ + +DL LN D +V
Sbjct: 1 MRVADFTFELPESLIAHYPQAERSGCRLLSLNGSDGA---LTHGVFTDLLHKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARIFGRKAS-----GGKIEVLVERMLDDTRVLAHVRSSKAPKPGSDLLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ ++AT++ + +T L + + ++ +G +PLPPYI RP + D
Sbjct: 113 E---SVQATMLARHDT---LFEIEFNDARPVLDILNSIGHMPLPPYI--DRPDEDADREL 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y++ G+VAAPTAGLHF LL L GI+ FVTLHVGAGTF PV+V+ +DHI
Sbjct: 165 YQTVYSQKPGAVAAPTAGLHFDEPLLVALREKGIETAFVTLHVGAGTFQPVRVDTIEDHI 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFI 297
MH+E + A+ + K+RG R+++VGTTS+R LE+A E+ +I P+ G T IFI
Sbjct: 225 MHAEYAEVPQDVVDAVLACKARGNRVIAVGTTSVRSLESAAQAAENTLIAPFFGDTKIFI 284
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY ++ +D L++NFHLP+STL+MLVSAF G + T + YQ A++ YRF+SYGD +
Sbjct: 285 YPGYHYQVIDALVTNFHLPESTLIMLVSAFAGYKHTMRAYQQAVAEQYRFFSYGDAMFIT 344
Query: 358 Q 358
+
Sbjct: 345 R 345
>gi|261491895|ref|ZP_05988473.1| queuine tRNA-ribosyltransferase [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261494438|ref|ZP_05990925.1| queuine tRNA-ribosyltransferase [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261309923|gb|EEY11139.1| queuine tRNA-ribosyltransferase [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261312442|gb|EEY13567.1| queuine tRNA-ribosyltransferase [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 361
Score = 444 bits (1142), Expect = e-122, Method: Composition-based stats.
Identities = 134/364 (36%), Positives = 201/364 (55%), Gaps = 18/364 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +F F+LP IA P R ++RL+ ++ +D DL +N D ++
Sbjct: 1 MLVSDFHFNLPDELIARYPTAERSASRLLHLNGETG---EFADQQFVDLYDHINEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + + SK K+G L F
Sbjct: 58 FNNTRVIPARLYGRKPS-----GGKVEALVERVLDEHCCLAHVKASKAPKEGAELIFGED 112
Query: 121 DGQSR--LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
AT++ + +T L+ L + G +PLPPYI RP + D
Sbjct: 113 KLGEGKGFTATMVARHDTLFELVFNEDQ--PLFELLQQAGHMPLPPYI--DRPDEDADQE 168
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y+K+ G+VAAPTAGLHF + +L +L + G+ FVTLHVGAGTF PV+VE +DH
Sbjct: 169 RYQTVYSKVLGAVAAPTAGLHFDNAMLEKLKAKGVDTAFVTLHVGAGTFQPVRVETIEDH 228
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT---EDGI-INPWSGFTN 294
MH+E + + + K++G R++++GTTS+R +E+A +DG I P+ T
Sbjct: 229 KMHAEYAEVSQEVVDKILATKAKGKRVIAIGTTSVRSVESAAQAAEKDGKLIAPFFSDTA 288
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IF+ PG F+ +D L++NFHLP+STL+MLVSAF G T Y HA+ YRF+SYGD
Sbjct: 289 IFLYPGKTFKVIDALVTNFHLPESTLIMLVSAFAGYRNTMNAYAHAVETKYRFFSYGDAM 348
Query: 355 LLFQ 358
+ +
Sbjct: 349 FINK 352
>gi|320186034|gb|EFW60779.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shigella
flexneri CDC 796-83]
Length = 356
Score = 444 bits (1142), Expect = e-122, Method: Composition-based stats.
Identities = 139/359 (38%), Positives = 202/359 (56%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFFFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTSVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SINATMTARH--GALFEVEFNDDRSVLDILNSIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
G++++ VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 286 LGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFIT 344
>gi|114707080|ref|ZP_01439979.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Fulvimarina
pelagi HTCC2506]
gi|114537630|gb|EAU40755.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Fulvimarina
pelagi HTCC2506]
Length = 358
Score = 444 bits (1142), Expect = e-122, Method: Composition-based stats.
Identities = 204/361 (56%), Positives = 254/361 (70%), Gaps = 9/361 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LPP RIALRP PR+SA L+ V +SD ++DLPA + D +V
Sbjct: 1 MRVDLFDFELPPERIALRPAEPRESAMLLGV-----SLTGLSDLRIADLPALIEPGDVLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRRE---KEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
FN+TKVI AQL G R +R ++ TLHMR+SP SW+ + RP K IK GD L F
Sbjct: 56 FNDTKVIPAQLFGTRVREDSRDGEGVAQVEATLHMRLSPGSWAAFVRPGKRIKVGDTLVF 115
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
S D ++ L A V + GE L F SG +L+ I+ VG +PLPPYIA +R DARD+
Sbjct: 116 ASDDAET-LAAEVTARGEGGEATLTFEHSGPDLDAAIAAVGHVPLPPYIAARRGDDARDW 174
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YA+ G+VAAPTAGLHFT NLL +L G+ F+TLHVGAGTF+PVK +DT+D
Sbjct: 175 TDYQTIYAREAGAVAAPTAGLHFTDNLLEKLHERGVATEFLTLHVGAGTFLPVKADDTED 234
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+EIG IDA A LN+ +S GGRI+SVGTTSLRLLE+A +DG I P++G T+IFI
Sbjct: 235 HRMHAEIGTIDAAMADRLNAARSAGGRIISVGTTSLRLLESAAGDDGRIAPFTGPTDIFI 294
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRF+AVD LM+NFHLP+STL MLVSAFCG+E ++ Y+HAI + YRFYSYGD LL
Sbjct: 295 TPGYRFKAVDRLMTNFHLPRSTLFMLVSAFCGLERMRRAYEHAIENGYRFYSYGDACLLD 354
Query: 358 Q 358
+
Sbjct: 355 R 355
>gi|126726330|ref|ZP_01742171.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodobacterales bacterium HTCC2150]
gi|126704193|gb|EBA03285.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodobacterales bacterium HTCC2150]
Length = 359
Score = 443 bits (1141), Expect = e-122, Method: Composition-based stats.
Identities = 165/361 (45%), Positives = 229/361 (63%), Gaps = 13/361 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +++FDLP + IA RP PR +AR++ V + S D V+DL LN+ D +V
Sbjct: 1 MKLSDYNFDLPETLIATRPAVPRTAARMLHVAGDDSV-----DLSVTDLTDLLNAGDLLV 55
Query: 61 FNNTKVITAQLNGVRFCHI--NRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
NNTKVI A+L G RF +I TL + W +P K +K+G+ + F
Sbjct: 56 LNNTKVIPARLFGQRFRQGDAGATSAKIEMTLLSPTTDGHWQALVKPLKKVKEGEEVVF- 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+L A +I K + G ++ F+ G + + ++ VG +PLPPYIA KR D +D++
Sbjct: 115 ----SEKLSAKLISKAD-GMSVVAFNQQGRDFDEALAEVGKMPLPPYIAAKRAADQQDHI 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LL ++ + G+ + +VTLHVGAGTF+PVKV+D H
Sbjct: 170 DYQTVFAQTTGAVAAPTASLHFDQELLDKIRAKGVNITYVTLHVGAGTFLPVKVDDISQH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE G + A+A+ +GGR++ VGTT+LRL+ETA E+G I+PW G T+IFI
Sbjct: 230 KMHSEWGEVTDGAAKAIMQTHEQGGRVIPVGTTALRLIETAADENGKISPWVGDTDIFIH 289
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY F+ D LM+NFHLPKSTL+MLVSA G K++Y HAI H YRF+SYGD+SLL
Sbjct: 290 PGYEFKVTDALMTNFHLPKSTLMMLVSALMGQSRIKEVYSHAIEHKYRFFSYGDSSLLCP 349
Query: 359 K 359
+
Sbjct: 350 E 350
>gi|218708620|ref|YP_002416241.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
splendidus LGP32]
gi|254764290|sp|B7VJR7|QUEA_VIBSL RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|218321639|emb|CAV17591.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
splendidus LGP32]
Length = 350
Score = 443 bits (1141), Expect = e-122, Method: Composition-based stats.
Identities = 139/363 (38%), Positives = 204/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N ++D D+ + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQEERTASRLLKLDGNNGN---LADGSFKDVLDLVEPGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + S + R SK K G L
Sbjct: 58 FNNTRVIPARVFGRKAS-----GGKLEVLVERMLDEKSILAHVRCSKSPKPGTKLFLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D EA ++ + + + + S + ++ VG +PLPPYI RP + D Y
Sbjct: 113 D---EYEAEMVARHDA--LFEIHFTSDQSVLEILNSVGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF L++ + G++ +VTLHVGAGTF PVKV++ +DH M
Sbjct: 166 QTVYNEKPGAVAAPTAGLHFDDKLMADMKEKGVEFAYVTLHVGAGTFQPVKVDNINDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT---EDG-IINPWSGFTNIF 296
H+E + A+ + K+RGGRI++VGTTS+R LE+A ++G + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAVAAAKARGGRIIAVGTTSVRSLESAAQDAVKNGTELVPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY ++ VD L++NFHLP+STL+MLVSAF G + Y HA+ YRF+SYGD +
Sbjct: 286 IFPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYDNVMGAYDHAVKSEYRFFSYGDAMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 NKK 348
>gi|325577691|ref|ZP_08147966.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
parainfluenzae ATCC 33392]
gi|325160436|gb|EGC72562.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
parainfluenzae ATCC 33392]
Length = 363
Score = 443 bits (1141), Expect = e-122, Method: Composition-based stats.
Identities = 139/368 (37%), Positives = 203/368 (55%), Gaps = 23/368 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R S RL+ ++ IS +D+ ++ D ++
Sbjct: 1 MRVSDFHFNLPDELIARYPKEDRSSCRLLQLNGENG---EISHRTFTDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + +S + + + R SK K+G L
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKIEVLVERVLSEHHFLAHIRSSKAPKEGTELFLGED 112
Query: 121 DGQSR--LEATVIDKWNTGEILLVFSISGIE--LERQISLVGTIPLPPYIARKRPIDARD 176
++A ++ + + L ++ + + +G +PLPPYI RP + D
Sbjct: 113 KLGENNGVKAIMVGRQDA---LFEVELADKSRNVLDVLQEIGHMPLPPYI--DRPDEEAD 167
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT Y K+ G+VAAPTAGLHF LL +L G+ FVTLHVGAGTF PV+VE+ +
Sbjct: 168 QECYQTVYNKVPGAVAAPTAGLHFDDELLQKLHEKGVNFEFVTLHVGAGTFQPVRVENIE 227
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA---TTEDG---IINPWS 290
DHIMH+E + A+ K G R+++VGTTS+R +ETA E+G +I P+
Sbjct: 228 DHIMHAEYVELSQEVCNAIIETKKAGKRVIAVGTTSVRSVETAALSAEENGNPDLIEPYF 287
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
T+IFI PG FR VD L++NFHLP+STL+MLVSAF G T Y+ A+ + YRF+SY
Sbjct: 288 SDTSIFIYPGKSFRVVDALITNFHLPESTLIMLVSAFAGFSHTMNAYKSAVENRYRFFSY 347
Query: 351 GDTSLLFQ 358
GD + +
Sbjct: 348 GDAMFITK 355
>gi|240013360|ref|ZP_04720273.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae DGI18]
gi|240120433|ref|ZP_04733395.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae PID24-1]
Length = 346
Score = 443 bits (1141), Expect = e-122, Method: Composition-based stats.
Identities = 152/360 (42%), Positives = 208/360 (57%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V + + + D + DLP ++ + D +V
Sbjct: 1 MDISDFDFTLPEHLIAQHPPEVRGSSRLLVALSD----MPLQDRVFGDLPDYVEAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 109 --EGGIRAVMVGR--EGELFCLRFEGGQTVYELLEQNGHLPLPPYI--ERAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + T A+ + K+RG + +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 223 HSEWFEVPSETVAAVEAAKARGNKAWAVGTTSMRALESAARATGYLKDGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRF VD L++NFHLPKSTLLMLVSAF G+ + +Y+HAI YRF+SYGD +L +
Sbjct: 283 YRFNVVDRLVTNFHLPKSTLLMLVSAFSGMGHIRAVYRHAIEREYRFFSYGDAMVLGRNE 342
>gi|154248190|ref|YP_001419148.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Xanthobacter autotrophicus Py2]
gi|238686741|sp|A7IN97|QUEA_XANP2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|154162275|gb|ABS69491.1| Queuosine biosynthesis protein [Xanthobacter autotrophicus Py2]
Length = 362
Score = 443 bits (1141), Expect = e-122, Method: Composition-based stats.
Identities = 183/362 (50%), Positives = 243/362 (67%), Gaps = 6/362 (1%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP IALRP PRD+AR++VV P +SD V DLP F+ +NDA+V
Sbjct: 1 MRVDAFDFDLPEEHIALRPAEPRDAARMLVVRP--GGAPELSDLKVRDLPDFITANDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A L GVR I L R+ + W +A+P K ++ GD + F +
Sbjct: 59 VNDTRVIPAALEGVRERDGGSA-VRIEANLIKRLDASRWQAFAKPGKRLRVGDRVRFGGE 117
Query: 121 DGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+A + K + G ++L F ++G L+ ++ VG +P+PPYIA +R D RD
Sbjct: 118 GSACLLGALDAQIAAKEDDGSVILAFDLAGTALDEAVTAVGHMPIPPYIAARRAEDDRDR 177
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT +A++ GSVAAPTA LHFT L++R+ + G ++ VTLHVGAGTF+PVK EDT
Sbjct: 178 ADYQTLFARVSGSVAAPTASLHFTPELMARIAATGASMHTVTLHVGAGTFLPVKAEDTTG 237
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+E G + A TA ALN+VK++GGRI +VG+TS RL+E+AT EDG I P+ G T+IFI
Sbjct: 238 HRMHAEWGEVSADTAAALNAVKAKGGRIFTVGSTSTRLIESATGEDGTIRPFVGETDIFI 297
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFRAVD +++NFHLP+STL+MLV+AF G E K+ Y HAI+ YRFYSYGD LL
Sbjct: 298 TPGYRFRAVDGMLTNFHLPRSTLVMLVAAFVGHEAQKRAYAHAIAAGYRFYSYGDACLLL 357
Query: 358 QK 359
+
Sbjct: 358 PE 359
>gi|315641796|ref|ZP_07896800.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus italicus DSM 15952]
gi|315482471|gb|EFU73010.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus italicus DSM 15952]
Length = 343
Score = 443 bits (1141), Expect = e-122, Method: Composition-based stats.
Identities = 153/357 (42%), Positives = 211/357 (59%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++FDFDLP IA P+ R S+RL+V+ ++D ++ LN+ DA+V
Sbjct: 2 LTTEDFDFDLPEELIAQTPLTDRASSRLLVLDRKT---KEMADKHFYEIIDELNAGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L GV+ + L ++W +P+K K G + F
Sbjct: 59 MNNTRVLPARLYGVK----EETGAHLELLLLNNTEGDTWETLIKPAKRAKVGTEITF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A V ++ + G ++ F GI LE + +G +PLPPYI + D Y
Sbjct: 112 -GDGRLKAIVEEELDHGGRMIRFVYEGIFLE-ILESLGEMPLPPYIKER----LEDPERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G+ + ++TLHVG GTF PV V++ +H M
Sbjct: 166 QTVYAKENGSAAAPTAGLHFTKELLEKIQAKGVHLVYLTLHVGLGTFRPVSVDNIAEHEM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A L +V+ GGRIV+VGTTS+R LET T+ DG I SG+TNIFI P
Sbjct: 226 HSEFYRLTQEAADELTAVRDAGGRIVAVGTTSIRTLETIGTKFDGAIQADSGWTNIFIKP 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ VD +NFHLPKSTL+MLVSAF G E + YQHAI YRF+S+GD +
Sbjct: 286 GYQFKLVDAFSTNFHLPKSTLVMLVSAFAGREFVLEAYQHAIDEKYRFFSFGDAMFV 342
>gi|317056882|ref|YP_004105349.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Ruminococcus albus 7]
gi|315449151|gb|ADU22715.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Ruminococcus albus 7]
Length = 355
Score = 443 bits (1141), Expect = e-122, Method: Composition-based stats.
Identities = 131/359 (36%), Positives = 189/359 (52%), Gaps = 16/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F ++LP IA PV PR+++R++ + + +L L D +V
Sbjct: 7 MKRSDFFYELPQELIAQTPVEPRNASRMLCLDRFTG---EVGHDHFYNLCDHLKKGDLLV 63
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+++V+ A++ G I L + + W + RP K + G F
Sbjct: 64 LNDSRVLPARIYG----ETEDTHSFIEFLLVEQRANMEWEILCRPGKKARVGRRFVF--- 116
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISG-IELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G L A + + G + F L + +G +PLPPYI K +D
Sbjct: 117 -GDGLLRAEITEVLEDGNRIARFECDDSTNLFAALDEIGQMPLPPYITEK----LKDKER 171
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y+ GS AAPTAGLHFT L+ + ++G+ + +VTLHVG GTF PVK + DH
Sbjct: 172 YQTVYSNEIGSSAAPTAGLHFTKEQLADIEAMGVNIAYVTLHVGLGTFRPVKEDKVLDHK 231
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH E + TA +N K+ GGR+++VGTTS R LE+ G I P GFT IFI P
Sbjct: 232 MHREHYELPKRTADLINKTKAEGGRVIAVGTTSCRTLESVAALYGDIRPCDGFTEIFIYP 291
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
G+ F+ +D L++NFHLP+STL+MLVSAF G E T Y+ A+ YRF+S+GD+ +
Sbjct: 292 GFEFKVLDGLITNFHLPESTLIMLVSAFAGYENTMNAYKIAVEEKYRFFSFGDSMFIAP 350
>gi|194097646|ref|YP_002000684.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae NCCP11945]
gi|291044646|ref|ZP_06570355.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae DGI2]
gi|193932936|gb|ACF28760.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae NCCP11945]
gi|291011540|gb|EFE03536.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae DGI2]
gi|317163467|gb|ADV07008.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae TCDC-NG08107]
Length = 356
Score = 443 bits (1141), Expect = e-122, Method: Composition-based stats.
Identities = 152/360 (42%), Positives = 208/360 (57%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P+ + + D + DLP ++ + D +V
Sbjct: 11 MDISDFDFTLPEHLIAQHPPEVRGSSRLLVALPD----MPLQDRVFGDLPDYVEAGDVLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 67 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 119 --EGGIRAVMVGR--EGELFCLRFEGGQTVYELLEQNGHLPLPPYI--ERAADADDDSRY 172
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 173 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 232
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + T A+ + K+RG + +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 233 HSEWFEVPSETVAAVEAAKARGNKAWAVGTTSMRALESAARATGYLKDGQGDTDIFITPG 292
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRF VD L++NFHLPKSTLLMLV AF G+ + +Y+HAI YRF+SYGD +L +
Sbjct: 293 YRFNVVDRLVTNFHLPKSTLLMLVGAFSGMGHIRAVYRHAIEREYRFFSYGDAMVLGRNE 352
>gi|75910998|ref|YP_325294.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Anabaena
variabilis ATCC 29413]
gi|91207412|sp|Q3M3N7|QUEA_ANAVT RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|75704723|gb|ABA24399.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Anabaena
variabilis ATCC 29413]
Length = 408
Score = 443 bits (1141), Expect = e-122, Method: Composition-based stats.
Identities = 151/385 (39%), Positives = 202/385 (52%), Gaps = 38/385 (9%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNL-SCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +D+ LPP RIA P PRDS+RL+VV+ + DLP L D ++
Sbjct: 27 LAGYDYVLPPERIAQNPAVPRDSSRLLVVNSQTTGKETPPLHQIFRDLPDILRPGDLLIM 86
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNTKVI A+L G + E+ L N W +P K KKG + F
Sbjct: 87 NNTKVIPARLYGRKSS-----GAEVEILLLEERKFNCWLALVKPGKRFKKGTQIIFEGLG 141
Query: 122 GQS-------------------------RLEATVI--DKWNTGEILLVFSISGIELERQI 154
++ +L ATV+ DK G +L G L + +
Sbjct: 142 IRNLGIKNSPHYPLSPEGFPPSPVPNPHQLTATVLETDKATGGRLLQFDLPEGESLVQLL 201
Query: 155 SLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIK 214
G IPLPPYI + D + YQT YA+ G++AAPTAGLHFT LL +L I
Sbjct: 202 DKFGEIPLPPYITASQAADEQ----YQTVYAEQPGAIAAPTAGLHFTPELLEKLRDRNIN 257
Query: 215 VYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLR 274
F+TLHVG GTF PV+VED H MH E I A T + + K+ GGRI++VGTT +R
Sbjct: 258 QAFITLHVGVGTFRPVEVEDVATHQMHEEWIEIPAATVAQIKATKAAGGRIIAVGTTVVR 317
Query: 275 LLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETK 334
LE A G + + G TN+FI PGY+++ V+ L++NFHLP+S+LLMLVSA G E
Sbjct: 318 ALEGAAAS-GDLQEFCGKTNLFIYPGYKWQVVEGLITNFHLPRSSLLMLVSALIGRERLL 376
Query: 335 KMYQHAISHAYRFYSYGDTSLLFQK 359
+YQ AI+ YRFYS+GD L+ +
Sbjct: 377 NIYQEAIASQYRFYSFGDAMLILPE 401
>gi|301154782|emb|CBW14245.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
parainfluenzae T3T1]
Length = 363
Score = 443 bits (1141), Expect = e-122, Method: Composition-based stats.
Identities = 143/368 (38%), Positives = 204/368 (55%), Gaps = 23/368 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R S RL+ ++ IS +D+ ++ D ++
Sbjct: 1 MRVSDFHFDLPDELIARYPKEDRSSCRLLQLNGENG---EISHRTFTDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + +S + + + R SK K+G L
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKIEVLVERVLSEHHFLAHIRSSKAPKEGAELFLGED 112
Query: 121 DGQSR--LEATVIDKWNTGEILLVFSISGIE--LERQISLVGTIPLPPYIARKRPIDARD 176
+EA +I + +T L ++ + + +G +PLPPYI RP + D
Sbjct: 113 KLGENKGVEAIMIGRQDT---LFEVELADKSRNVLDVLQEIGHMPLPPYI--DRPDEEAD 167
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT Y K+ G+VAAPTAGLHF LL +L G+ FVTLHVGAGTF PV+VE+ +
Sbjct: 168 QECYQTVYNKVPGAVAAPTAGLHFDDELLQKLHEKGVNFEFVTLHVGAGTFQPVRVENIE 227
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA---TTEDG---IINPWS 290
DHIMH+E + A+ K G R+++VGTTS+R +ETA E+G +I P+
Sbjct: 228 DHIMHAEYVELSQEVCNAIIETKKAGKRVIAVGTTSVRSVETAALSAEENGNPDLIEPYF 287
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
T+IFI PG FR VD L++NFHLP+STL+MLVSAF G T Y+ A+ + YRF+SY
Sbjct: 288 SDTSIFIYPGKSFRVVDALITNFHLPESTLIMLVSAFAGFSHTMNAYKSAVENRYRFFSY 347
Query: 351 GDTSLLFQ 358
GD + +
Sbjct: 348 GDAMFITK 355
>gi|259909289|ref|YP_002649645.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Erwinia
pyrifoliae Ep1/96]
gi|224964911|emb|CAX56434.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein QueA) [Erwinia pyrifoliae Ep1/96]
gi|283479344|emb|CAY75260.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Erwinia
pyrifoliae DSM 12163]
Length = 358
Score = 443 bits (1140), Expect = e-122, Method: Composition-based stats.
Identities = 138/361 (38%), Positives = 203/361 (56%), Gaps = 19/361 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F LP S IA P R RL+ ++ ++ + +DL LN D +V
Sbjct: 3 MRVADFTFKLPESLIAHYPQTQRSGCRLLSLNGPDGA---LTHGVFTDLLHKLNPGDLLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + R SK + G L
Sbjct: 60 FNNTRVIPARIFGRKVS-----GGKIEVLVERMLDEKRVLAHVRSSKAPRPGSELLLGDD 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ ++AT++ + + L + + ++ +G +PLPPYI RP + D
Sbjct: 115 E---NVQATMLARHDA---LFEIEFNDARPVLDILNSIGHMPLPPYI--DRPDEDADREL 166
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y++ G+VAAPTAGLHF LL L GI+ FVTLHVGAGTF PV+V+ ++HI
Sbjct: 167 YQTVYSQKPGAVAAPTAGLHFDEPLLEALREKGIETAFVTLHVGAGTFQPVRVDTIEEHI 226
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDG--IINPWSGFTNIFI 297
MH+E + A+ + K+RG R+++VGTTS+R LE+A G +I P+ G T IFI
Sbjct: 227 MHAEYAEVPQDVVDAVLACKARGNRVIAVGTTSVRSLESAAQVAGNDLIAPFFGDTKIFI 286
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY ++ +D L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD +
Sbjct: 287 YPGYHYQVIDALVTNFHLPESTLIMLVSAFAGYQNTMHAYQQAVAEQYRFFSYGDAMFIT 346
Query: 358 Q 358
+
Sbjct: 347 R 347
>gi|52696131|pdb|1VKY|A Chain A, Crystal Structure Of S-Adenosylmethionine Trna
Ribosyltransferase (Tm0574) From Thermotoga Maritima At
2.00 A Resolution
gi|52696132|pdb|1VKY|B Chain B, Crystal Structure Of S-Adenosylmethionine Trna
Ribosyltransferase (Tm0574) From Thermotoga Maritima At
2.00 A Resolution
Length = 347
Score = 443 bits (1140), Expect = e-122, Method: Composition-based stats.
Identities = 142/357 (39%), Positives = 194/357 (54%), Gaps = 22/357 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V EFD++LPP IA PV PRD++RLMV+H I + ++ +L D +V
Sbjct: 13 MKVSEFDYELPPELIAQEPVEPRDASRLMVLHRKTQ---RIEHRIFREIIEYLEPGDLLV 69
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N +KVI A+L + + I L R+ W RP + +KKG L
Sbjct: 70 LNVSKVIPARLYARK-----KTGASIEILLIERLEEGIWKCLVRPGQKVKKGTELVI--- 121
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A + + G +L F +R I G PLPPYI + P+ Y
Sbjct: 122 --DEDLSAVCLGRGEDGTRILKFQPQD---DRLIFEKGRTPLPPYIKNEVPL-----ERY 171
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GSVAAPTAGLHFT L+ +L G++ V LHVG GTF PVKVE+ + H M
Sbjct: 172 QTVYAKEEGSVAAPTAGLHFTPELIEKLKKKGVQFAEVVLHVGIGTFRPVKVEEVEKHKM 231
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + T + L + RG RIV+VGTT++R LET + G T++FI P
Sbjct: 232 HEEFYQVPKETVRKLRETRERGNRIVAVGTTTVRTLETIARLPEQ-EEYVGKTDLFIYPP 290
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+ VD L++NFHLP+STLLMLV+AF G + + Y+ A+ YRF+S+GD L+
Sbjct: 291 FEFKLVDALVTNFHLPRSTLLMLVAAFAGKDFVMEAYREAVKRRYRFFSFGDAMLIL 347
>gi|163753005|ref|ZP_02160129.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Kordia
algicida OT-1]
gi|161326737|gb|EDP98062.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Kordia
algicida OT-1]
Length = 351
Score = 443 bits (1140), Expect = e-122, Method: Composition-based stats.
Identities = 147/360 (40%), Positives = 199/360 (55%), Gaps = 16/360 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ F+FDLP +A P RD ARLMV++ I DL + + D +V
Sbjct: 4 KLSHFNFDLPEDLLAEYPSEHRDEARLMVLNREKQT---IEHKKFKDLVDYFDEGDVMVL 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFFS 119
NNTKV A+L G + + I L ++ + W V P++ I+ G+ L+F
Sbjct: 61 NNTKVFPARLFGNK----EKTGARIEVFLLRELNEDQRLWDVLVDPARKIRIGNKLYFGE 116
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARDY 177
+ L A VID + L F G E ++ +G PLP YI KR ++ D
Sbjct: 117 DE---SLVAEVIDNTTSRGRTLRFLYDGSYEEFRTKLGELGQTPLPKYI--KRDVEPEDE 171
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YAK +G+VAAPTAGLHF+ +LL RL GI VTLHVG GTF PV+VED
Sbjct: 172 ERYQTIYAKEEGAVAAPTAGLHFSKHLLKRLEIKGIDFAEVTLHVGLGTFNPVEVEDLSK 231
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H M SE I+AP +N+ K+R R+ +VGTT +R LE++ + D +N + G+TN FI
Sbjct: 232 HKMDSEELKIEAPAVATVNNAKTRKQRVCAVGTTVMRALESSVSSDLTLNEYEGWTNKFI 291
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
P Y F + +++NFH PKSTLLM+VSAF G E K Y+ AI Y+FYSYGD L+
Sbjct: 292 FPPYEFSIANCMITNFHTPKSTLLMMVSAFAGHEFILKAYEEAIKEGYQFYSYGDAMLIL 351
>gi|251790678|ref|YP_003005399.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Dickeya
zeae Ech1591]
gi|247539299|gb|ACT07920.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Dickeya
zeae Ech1591]
Length = 357
Score = 443 bits (1140), Expect = e-122, Method: Composition-based stats.
Identities = 138/360 (38%), Positives = 203/360 (56%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R RL+ + I+ + +DL L D +V
Sbjct: 3 MRVADFSFELPEYLIARYPQAKRSGCRLLSLDGPTGA---IAHGVFTDLLDKLQPGDLLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK K G L
Sbjct: 60 FNNTRVIPARLFGRKAS-----GGKLEVLVERMLDDKRVLAHVRASKAPKPGTALLLGED 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++AT++ + + + + ++ ++ +G +PLPPYI RP +A D Y
Sbjct: 115 E---SVKATMLARHDA--LFEIQFDDTRDVLTILNDIGHMPLPPYI--DRPDEAADRELY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L G+++ FVTLHVGAGTF PV+VE +DHIM
Sbjct: 168 QTVYSQRPGAVAAPTAGLHFDEPLLAALKEKGVEMAFVTLHVGAGTFQPVRVESIEDHIM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
H+E + A+ + K+RG R+++VGTTS+R LE+A + + P+ G T IFI
Sbjct: 228 HAEYAEVPQAVVDAVLACKARGNRVIAVGTTSVRSLESAAQASAGESLAPFFGDTRIFIY 287
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY +R VD L++NFHLP+STL+MLVSAF G T Y+ A++ YRF+SYGD + +
Sbjct: 288 PGYHYRVVDALVTNFHLPESTLIMLVSAFAGYRHTMAAYRQAVTEQYRFFSYGDAMFITR 347
>gi|84387606|ref|ZP_00990623.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
splendidus 12B01]
gi|84377451|gb|EAP94317.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
splendidus 12B01]
Length = 350
Score = 443 bits (1140), Expect = e-122, Method: Composition-based stats.
Identities = 138/363 (38%), Positives = 201/363 (55%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N ++D D+ + D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPQEERTASRLLKLDGNSGN---LADGSFKDVLDLVEPGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + S + R SK K G L
Sbjct: 58 FNNTRVIPARVFGRKAS-----GGKLEVLVERMLDEKSILAHVRCSKSPKPGSKLFLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D EA ++ + + + + S + ++ VG +PLPPYI RP + D Y
Sbjct: 113 D---EYEAEMVARHDA--LFEIHFTSDQSVLEILNSVGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF L++ + G++ +VTLHVGAGTF PVKV++ +DH M
Sbjct: 166 QTVYNEKPGAVAAPTAGLHFDDKLMAGMKEKGVEFAYVTLHVGAGTFQPVKVDNINDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT----TEDGIINPWSGFTNIF 296
H+E + A+ + K+RGGRI++VGTTS+R LE+A + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAVAAAKARGGRIIAVGTTSVRSLESAAQDALRNGTELVPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY ++ VD L++NFHLP+STL+MLVSAF G + Y HA+ YRF+SYGD +
Sbjct: 286 IFPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYDNVMGAYDHAVKSEYRFFSYGDAMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 NKK 348
>gi|254460455|ref|ZP_05073871.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodobacterales bacterium HTCC2083]
gi|206677044|gb|EDZ41531.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodobacteraceae bacterium HTCC2083]
Length = 352
Score = 443 bits (1140), Expect = e-122, Method: Composition-based stats.
Identities = 166/363 (45%), Positives = 225/363 (61%), Gaps = 14/363 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA RP PR SARL+ L+ I D VSDL D +V
Sbjct: 1 MKLSDFDFYLPEDLIATRPAKPRSSARLL-----LAKDGAIKDAYVSDLVKIFQPGDLLV 55
Query: 61 FNNTKVITAQLNGVR--FCHINRREKEISCTLHMRVS-PNSWSVYARPSKVIKKGDILHF 117
NNTKVI A+L GVR E +I TL ++ P +W +P + +K+G+++ F
Sbjct: 56 LNNTKVIPARLFGVRKRESVHGSGEAKIEVTLLEPIATPGTWQALIKPLRKVKEGEVMVF 115
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L AT+ DK + G+ L F++ G + + ++ G +PLPPYIA +RP DA+D
Sbjct: 116 -----SETLSATLTDK-DDGQGTLQFNLLGDDFDTALAEAGAMPLPPYIAARRPADAQDK 169
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT +A+ G+VAAPTA LHF + LL L ++ VTLHVGAGTF+PVKVED
Sbjct: 170 DDYQTVFAQHSGAVAAPTASLHFDAALLGELKERCVEFAEVTLHVGAGTFLPVKVEDVTT 229
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+E G +D A + + K G R++ VGTT+LRL+E+A + G I PW G T+IFI
Sbjct: 230 HKMHAEWGQVDETAADQITAAKREGRRVIPVGTTALRLIESAAAQTGEIAPWEGETDIFI 289
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++F D LM+NFHLPKSTL+MLVSA G E ++Y HAI++ YRF+SYGD+SLL
Sbjct: 290 YPGFKFNVADALMTNFHLPKSTLMMLVSALMGKERVDQIYTHAIANEYRFFSYGDSSLLV 349
Query: 358 QKR 360
++
Sbjct: 350 PEK 352
>gi|307543992|ref|YP_003896471.1| S-adenosylmethionine:tRNAribosyltransferase-isome rase [Halomonas
elongata DSM 2581]
gi|307216016|emb|CBV41286.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase [Halomonas
elongata DSM 2581]
Length = 359
Score = 443 bits (1140), Expect = e-122, Method: Composition-based stats.
Identities = 139/360 (38%), Positives = 198/360 (55%), Gaps = 19/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F ++LP + IA P R RL+ V + +L L D +V
Sbjct: 1 MQRADFHYELPEALIARYPSEQRSDCRLLCVDGASGA---LDHRRFPELIDKLEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L+G + + L + + + R SK K G L F
Sbjct: 58 FNDTRVIPARLHGHKAS-----GGRVEMLLERPLDAHRGLAHLRSSKSPKIGTELTF--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++A V + + + + L + G +PLPPYI R + D Y
Sbjct: 110 --EGGIQAVVEGRREA--LFELRFLGETPLIALLERHGHMPLPPYITRD--DELSDRERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL RL + G++ FVTLHVGAGTF PV+V+D +H M
Sbjct: 164 QTVYARRDGAVAAPTAGLHFDEPLLERLAAKGVESAFVTLHVGAGTFQPVRVDDIREHEM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A + + + ++RG R+V+VGTTS+R LE+A+ + DG I P+SG T+IFI
Sbjct: 224 HSEWIEVSASVCEQVRAARARGNRVVAVGTTSVRCLESASLKSPDGDIAPYSGETDIFIY 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY +R VD L++NFHLP+STLLMLVS+F G + Y+ A+ Y F+SYGD L +
Sbjct: 284 PGYEWRVVDALVTNFHLPESTLLMLVSSFAGYDTVMAAYREAVQEGYAFFSYGDAMFLTR 343
>gi|303252317|ref|ZP_07338483.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 2 str. 4226]
gi|307247746|ref|ZP_07529784.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 2 str. S1536]
gi|302648776|gb|EFL78966.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 2 str. 4226]
gi|306855776|gb|EFM87941.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 2 str. S1536]
Length = 361
Score = 443 bits (1140), Expect = e-122, Method: Composition-based stats.
Identities = 135/364 (37%), Positives = 199/364 (54%), Gaps = 18/364 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +F FDLP IA P R ++RL+ ++ D SDL +N D ++
Sbjct: 1 MLVSDFHFDLPDELIARYPTEERTASRLLHLNGETG---HFEDKQFSDLLDQINEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARLYGRKAS-----GGKLEVLVERVLDEHRCLAHVRASKAPKEGAELVLGED 112
Query: 121 DGQSR--LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+A + + + + + + + G +PLPPYI RP + D
Sbjct: 113 KLGEGNGFKAIMTARHDA--LFELHFNEEQPVFDLLQQAGHMPLPPYI--DRPDEDADQE 168
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y+K+ G+VAAPTAGLHF + L +L + G+ + FVTLHVGAGTF PV+V++ DH
Sbjct: 169 RYQTVYSKVLGAVAAPTAGLHFDNPTLEKLKAKGVNIAFVTLHVGAGTFQPVRVDNILDH 228
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTN 294
MH+E + + + K+ G R+++VGTTS+R +E+A E +I P+ T+
Sbjct: 229 KMHAEYAEVSQAVVDQILATKATGKRVIAVGTTSVRSIESAAQAAEKEGKLIAPFFSDTS 288
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IF+ PG FR VD L++NFHLP+STL+MLVSAF G T K YQHA+ YRF+SYGD
Sbjct: 289 IFLYPGKTFRIVDALVTNFHLPESTLIMLVSAFAGYRNTMKAYQHAVEAKYRFFSYGDAM 348
Query: 355 LLFQ 358
+ +
Sbjct: 349 FINK 352
>gi|242240323|ref|YP_002988504.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Dickeya
dadantii Ech703]
gi|242132380|gb|ACS86682.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Dickeya
dadantii Ech703]
Length = 362
Score = 443 bits (1139), Expect = e-122, Method: Composition-based stats.
Identities = 139/360 (38%), Positives = 207/360 (57%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R + RL+ + ++ + +DL LN D +V
Sbjct: 3 MRVADFSFELPESLIARYPQAQRSACRLLSLEGTTGA---LTHGVFTDLLDTLNPGDLLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK K G L
Sbjct: 60 FNNTRVIPARLFGRKAS-----GGKLEVLVERMLDDKRVLAHVRASKAPKPGMELLLGED 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT++++ + + + ++ ++ +G +PLPPYI RP +A D Y
Sbjct: 115 E---SVHATMLERHDA--LFEIRFDDERDILTILNDIGHMPLPPYI--DRPDEAADRELY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L G+++ FVTLHVGAGTF PV+VE ++H+M
Sbjct: 168 QTVYSQRPGAVAAPTAGLHFDEPLLAALKEKGVQMAFVTLHVGAGTFQPVRVESIEEHVM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
H+E + A+ + K+RG R+V+VGTTS+R LE+A + G + P+ G T+IFI
Sbjct: 228 HAEYAEVPQEVLDAVLACKARGNRVVAVGTTSVRSLESAAQASPAGQLAPFFGDTSIFIY 287
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY +R VD L++NFHLP+STL+MLVSAF G T + Y+ A+ YRF+SYGD +
Sbjct: 288 PGYHYRVVDALVTNFHLPESTLIMLVSAFAGYRHTMEAYRQAVVSEYRFFSYGDAMFITP 347
>gi|33152347|ref|NP_873700.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
ducreyi 35000HP]
gi|46576951|sp|Q7VLY1|QUEA_HAEDU RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|33148570|gb|AAP96089.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
ducreyi 35000HP]
Length = 361
Score = 443 bits (1139), Expect = e-122, Method: Composition-based stats.
Identities = 141/364 (38%), Positives = 206/364 (56%), Gaps = 18/364 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +F F+LP IA P R ++RL+ ++ SD SDL +N D ++
Sbjct: 1 MLVSDFHFNLPDELIARYPKDERTASRLLHLNGESGK---FSDLHFSDLLDHINPGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G L
Sbjct: 58 FNNTRVIPARLYGRKES-----GGKLEVLIERVLDEHHCLAHIRCSKAPKAGTKLILGED 112
Query: 121 DGQ--SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ LEAT+I + +T + + + L + G IPLPPYI RP + D
Sbjct: 113 KLGIGNGLEATMISRHDT--LFELRFNATTPLFTLLQQAGHIPLPPYI--DRPDEDFDQE 168
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y+K+ G+VAAPTAGLHF + +L +L + G+ + FVTLHVGAGTF PV+VE+ +H
Sbjct: 169 RYQTVYSKVLGAVAAPTAGLHFDNPMLDKLKAKGVNMAFVTLHVGAGTFQPVRVENILEH 228
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTN 294
MH+E + + + K+ G R+++VGTTS+R +E+A +I P+ TN
Sbjct: 229 NMHAEYAEVTQAVVDQILATKAAGKRVIAVGTTSVRSIESAAQATQPTGKLIAPFFSDTN 288
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IF+ PG F+ VD+L++NFHLP+STL+MLVSAF G T YQHA+ YRF+SYGD
Sbjct: 289 IFLYPGKTFKIVDVLITNFHLPESTLIMLVSAFAGYRHTMNAYQHAVQQKYRFFSYGDAM 348
Query: 355 LLFQ 358
L+ +
Sbjct: 349 LINK 352
>gi|307245625|ref|ZP_07527711.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|307254583|ref|ZP_07536416.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 9 str.
CVJ13261]
gi|307259037|ref|ZP_07540767.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 11 str. 56153]
gi|306853327|gb|EFM85546.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|306862471|gb|EFM94432.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 9 str.
CVJ13261]
gi|306866704|gb|EFM98562.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 11 str. 56153]
Length = 361
Score = 443 bits (1139), Expect = e-122, Method: Composition-based stats.
Identities = 134/364 (36%), Positives = 199/364 (54%), Gaps = 18/364 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +F FDLP IA P R ++RL+ ++ D SDL +N D ++
Sbjct: 1 MLVSDFHFDLPDELIARYPTEERTASRLLHLNGETG---HFEDKQFSDLLDQINEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARLYGRKAS-----GGKLEVLVERVLDEHRCLAHVRASKAPKEGAELVLGED 112
Query: 121 DGQSR--LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+A + + + + + + + G +PLPPYI RP + D
Sbjct: 113 KLGEGNGFKAIMTARHDA--LFELHFNEEQPVFDLLQQAGHMPLPPYI--DRPDEDADQE 168
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y+K+ G+VAAPTAGLHF + L +L + G+ + FVTLHVGAGTF PV+V++ +H
Sbjct: 169 RYQTVYSKVLGAVAAPTAGLHFDNPTLEKLKAKGVNIAFVTLHVGAGTFQPVRVDNILEH 228
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTN 294
MH+E + + + K+ G R+++VGTTS+R +E+A E +I P+ T+
Sbjct: 229 KMHAEYAEVSQAVVDQILATKATGKRVIAVGTTSVRSIESAAQAAEKEGKLIAPFFSDTS 288
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IF+ PG FR VD L++NFHLP+STL+MLVSAF G T K YQHA+ YRF+SYGD
Sbjct: 289 IFLYPGKTFRIVDALVTNFHLPESTLIMLVSAFAGYRNTMKAYQHAVEAKYRFFSYGDAM 348
Query: 355 LLFQ 358
+ +
Sbjct: 349 FINK 352
>gi|76262724|gb|ABA41450.1| S-adenosylmethionine: tRNA-ribosyltransferase isomerase
[Pseudomonas syringae pv. maculicola]
gi|330957505|gb|EGH57765.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. maculicola str. ES4326]
Length = 354
Score = 443 bits (1139), Expect = e-122, Method: Composition-based stats.
Identities = 145/358 (40%), Positives = 203/358 (56%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S+RL+ + ++ +DL + D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTLDGPTGA---LAHRQFTDLLEHVRLGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRASKSPKPGSSILI--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
EA ++ + +T L E+ + VG +PLPPYI RP + D Y
Sbjct: 110 --DGGGEAEMVARHDTLFELRFAE----EVLPLLDRVGHMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAERAGAVAAPTAGLHFDQPLLDAIAAKGVETAFVTLHVGAGTFQPVRVEQIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + ++RGGR+++VGTTS+R LE+A DG++ P+SG T+IFI PG
Sbjct: 222 HSEWLEVSQSVVDAVAACRARGGRVIAVGTTSVRSLESAAR-DGVLKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y A+ H YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAVEHGYRFFSYGDAMFITR 338
>gi|325266040|ref|ZP_08132726.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Kingella
denitrificans ATCC 33394]
gi|324982678|gb|EGC18304.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Kingella
denitrificans ATCC 33394]
Length = 340
Score = 443 bits (1139), Expect = e-122, Method: Composition-based stats.
Identities = 157/358 (43%), Positives = 209/358 (58%), Gaps = 19/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EFDF LP IA P R S+RL+V N I D DLP ++ + D +V
Sbjct: 1 MHISEFDFHLPEHLIAQNPPAVRGSSRLLVAQHN----QPIEDRHFPDLPNYIATGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + +I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKA-----TGGKIEALIERVLDEHTALAHIRSSKSPKAGTELIF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ L AT+ ++ GE+ + + + G +PLPPYI RP D D Y
Sbjct: 109 --EGSLHATMTERV--GELFKLQFHHRHNVYTLLEEYGALPLPPYIV--RPADDNDDARY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT +LS L G++ VTLHVGAGTF PV+V++ +H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTHEILSALQQKGVEFAEVTLHVGAGTFQPVRVDNIAEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + T + + K+RG R+ SVGTTSLR +E+A G ++ G T+IFITPG
Sbjct: 223 HSEWFDVPEATVAKIQAAKARGNRVWSVGTTSLRAIESAARS-GSLHAGQGDTDIFITPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y FR +D L++NFHLPKSTLLMLVSAF G E +++Y+HAI YRF+SYGD LL +
Sbjct: 282 YTFRVIDGLITNFHLPKSTLLMLVSAFAGSERIREIYRHAIEQEYRFFSYGDAMLLHR 339
>gi|254361281|ref|ZP_04977424.1| queuine tRNA-ribosyltransferase [Mannheimia haemolytica PHL213]
gi|153092777|gb|EDN73820.1| queuine tRNA-ribosyltransferase [Mannheimia haemolytica PHL213]
Length = 361
Score = 443 bits (1139), Expect = e-122, Method: Composition-based stats.
Identities = 134/364 (36%), Positives = 201/364 (55%), Gaps = 18/364 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +F F+LP IA P R ++RL+ ++ +D DL +N D ++
Sbjct: 1 MLVSDFHFNLPDELIARYPTAERSASRLLHLNGETG---EFADQQFVDLYDHINEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + + SK K+G L F
Sbjct: 58 FNNTRVIPARLYGRKPS-----GGKVEALVERVLDEHRCLAHVKASKAPKEGAELIFGED 112
Query: 121 DGQSR--LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
AT++ + +T L+ L + G +PLPPYI RP + D
Sbjct: 113 KLGEGKGFTATMVARHDTLFELVFNEEQ--PLFELLQQAGHMPLPPYI--DRPDEDADQE 168
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y+K+ G+VAAPTAGLHF + +L +L + G+ FVTLHVGAGTF PV+VE +DH
Sbjct: 169 RYQTVYSKVLGAVAAPTAGLHFDNAMLEKLKAKGVDTAFVTLHVGAGTFQPVRVETIEDH 228
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT---EDGI-INPWSGFTN 294
MH+E + + + K++G R++++GTTS+R +E+A +DG I P+ T
Sbjct: 229 KMHAEYAEVSQEVVDKILATKAKGKRVIAIGTTSVRSVESAAQAAEKDGKLIAPFFSDTA 288
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IF+ PG F+ +D L++NFHLP+STL+MLVSAF G T Y HA+ YRF+SYGD
Sbjct: 289 IFLYPGKTFKVIDALVTNFHLPESTLIMLVSAFAGYRNTMNAYAHAVETKYRFFSYGDAM 348
Query: 355 LLFQ 358
+ +
Sbjct: 349 FINK 352
>gi|317495474|ref|ZP_07953842.1| tRNA ribosyltransferase-isomerase [Gemella moribillum M424]
gi|316914288|gb|EFV35766.1| tRNA ribosyltransferase-isomerase [Gemella moribillum M424]
Length = 342
Score = 443 bits (1139), Expect = e-122, Method: Composition-based stats.
Identities = 143/357 (40%), Positives = 205/357 (57%), Gaps = 17/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++FDF LP IA P+ RD+++L+ + SD+ + + D +V
Sbjct: 1 MKLEQFDFYLPEELIAQTPLLKRDTSKLLCIDKK---ENNYEHKTFSDIIDYFEAGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + I L N W +P+K IK G ++ F
Sbjct: 58 LNNTRVMPARLYGQK----KDTGAAIEVLLLKNEVDNIWECLVKPAKRIKIGSVVSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +EA + G F GI + ++ +GT+PLPPYI + D Y
Sbjct: 111 -GDGIMEAICTRVLDDGFRYFEFKYEGI-FQERLDELGTMPLPPYIKERLT----DKERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AAPTAGLHFT+ LL ++ + G+ V ++TLHVG GTF PV VE+ ++H M
Sbjct: 165 QTVYSKEVGSSAAPTAGLHFTNELLDKIKAKGVNVAYLTLHVGLGTFRPVAVENIEEHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE +D TA+ +N K GRI SVGTT+ R LET A +G I SG+TNIFI P
Sbjct: 225 HSEYYTLDEKTAEIINKTKENNGRIFSVGTTTTRTLETIARDNNGKIVAASGWTNIFIYP 284
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
G++F+ VD L++NFHLPKS+L+MLVSAF E+ +Y+ A+ + YRF+S+GD ++
Sbjct: 285 GFKFKCVDGLITNFHLPKSSLIMLVSAFYEREKILDLYKIAVENKYRFFSFGDAMII 341
>gi|83858653|ref|ZP_00952175.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Oceanicaulis alexandrii HTCC2633]
gi|83853476|gb|EAP91328.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Oceanicaulis alexandrii HTCC2633]
Length = 357
Score = 443 bits (1139), Expect = e-122, Method: Composition-based stats.
Identities = 184/363 (50%), Positives = 226/363 (62%), Gaps = 14/363 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP RIALRP PRDSARL+ V +SD V DLP L D +V
Sbjct: 4 MRLSDFDFHLPEDRIALRPARPRDSARLLQV-----KDGGLSDLGVLDLPNLLEPGDLLV 58
Query: 61 FNNTKVITAQLNGVRFC--HINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
FN+T+VI A L GVR H EI LH R W + RP+K +K+GD LHF
Sbjct: 59 FNDTRVIPAALTGVRPARAHGGGGGVEIEINLHKRDDEAVWRAFVRPAKRLKEGDTLHF- 117
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ L A V +K GE++L F +G+EL++ I G PLPPYIA KR DA D
Sbjct: 118 ----KGGLTAEVREKREGGEVVLTFDRAGVELDKAIVEAGAPPLPPYIASKRAADAADLE 173
Query: 179 DYQTTYA--KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT YA GSVAAPTAGLHFT L + L + GIK VTLHVGAGTF+PVK ED
Sbjct: 174 DYQTVYAAPDKAGSVAAPTAGLHFTDRLFAALDARGIKRTHVTLHVGAGTFLPVKTEDLS 233
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+H MH+E + A+ +N + GGRI++VGTTS+R LE+A EDG + + T IF
Sbjct: 234 EHQMHAEWYSVSEEAARTINETRKAGGRIIAVGTTSIRTLESAAEEDGTVRAEARDTAIF 293
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPG RF+ +D LM+NFHLPKSTL MLVSA G E+ Y HAI YRF+SYGD+SLL
Sbjct: 294 ITPGCRFKVIDALMTNFHLPKSTLFMLVSALAGFEDMHAAYAHAIREHYRFFSYGDSSLL 353
Query: 357 FQK 359
++K
Sbjct: 354 WRK 356
>gi|293397754|ref|ZP_06641960.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae F62]
gi|291611700|gb|EFF40769.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae F62]
Length = 356
Score = 443 bits (1139), Expect = e-122, Method: Composition-based stats.
Identities = 151/360 (41%), Positives = 207/360 (57%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V + + + D + DLP ++ + D +V
Sbjct: 11 MDISDFDFTLPEHLIAQHPPEVRGSSRLLVALSD----MPLQDRVFGDLPDYVEAGDVLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 67 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 119 --EGGIRAVMVGR--EGELFCLRFEGGQTVYELLEQNGHLPLPPYI--ERAADADDDSRY 172
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 173 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 232
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + T A+ + K+RG + +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 233 HSEWFEVPSETVAAVEAAKARGNKAWAVGTTSMRALESAARATGYLKDGQGDTDIFITPG 292
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRF VD L++NFHLPKSTLLMLV AF G+ + +Y+HAI YRF+SYGD +L +
Sbjct: 293 YRFNVVDRLVTNFHLPKSTLLMLVGAFSGMGHIRAVYRHAIEREYRFFSYGDAMVLGRNE 352
>gi|303251428|ref|ZP_07337604.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|307252337|ref|ZP_07534234.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|302649660|gb|EFL79840.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|306860259|gb|EFM92275.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 6 str. Femo]
Length = 361
Score = 443 bits (1139), Expect = e-122, Method: Composition-based stats.
Identities = 136/364 (37%), Positives = 199/364 (54%), Gaps = 18/364 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +F FDLP IA P R ++RL+ ++ D SDL +N D ++
Sbjct: 1 MLVSDFHFDLPDELIARYPTEERTASRLLHLNGETG---HFEDKQFSDLLDQINEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARLYGRKAS-----GGKLEVLVERVLDEHRCLAHVRASKAPKEGAELVLGED 112
Query: 121 DGQSR--LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+A + + + + + + + G +PLPPYI RP + D
Sbjct: 113 KLGEGNGFKAIMTARHDA--LFELHFNEEQPVFDLLQQAGHMPLPPYI--DRPDEDADQE 168
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y+K+ G+VAAPTAGLHF + L +L S G+ + FVTLHVGAGTF PV+V++ DH
Sbjct: 169 RYQTVYSKVLGAVAAPTAGLHFDNPTLEKLKSKGVNIAFVTLHVGAGTFQPVRVDNILDH 228
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTN 294
MH+E + + + K+ G R+++VGTTS+R +E+A E +I P+ T+
Sbjct: 229 KMHAEYAEVSQAVVDQILATKATGKRVIAVGTTSVRSIESAAQAAEKEGKLIAPFFSDTS 288
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IF+ PG FR VD L++NFHLP+STL+MLVSAF G T K YQHA+ YRF+SYGD
Sbjct: 289 IFLYPGKTFRIVDALVTNFHLPESTLIMLVSAFAGYRNTMKAYQHAVEAKYRFFSYGDAM 348
Query: 355 LLFQ 358
+ +
Sbjct: 349 FINK 352
>gi|291566847|dbj|BAI89119.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Arthrospira
platensis NIES-39]
Length = 441
Score = 442 bits (1138), Expect = e-122, Method: Composition-based stats.
Identities = 160/366 (43%), Positives = 203/366 (55%), Gaps = 26/366 (7%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
+D++LPP RIA PV PRDS+RL+VV P L DLP L D ++ NNT+
Sbjct: 84 YDYELPPDRIAQNPVIPRDSSRLLVVD----SPQSHQHRLFRDLPDLLQPQDLLILNNTR 139
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSR 125
V+ A+L G + R I L +PN W +P K K GD L F S+ G
Sbjct: 140 VLPARLYGRK-----SRSAAIEILLLQEQAPNCWLALVKPGKRFKIGDRLEFQSKSGGEI 194
Query: 126 LEATVIDKWN-TGEILLVFSIS-GIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTT 183
L ATVID TG LL F + G L + G IP PPY+ + + + YQT
Sbjct: 195 LYATVIDTNPSTGGRLLKFEVPQGQSLVSILDQFGEIPFPPYVTDSQALAEQ----YQTI 250
Query: 184 YAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSE 243
Y G+VAAPTAGLHFT L RL I FVTLHVG GTF PV+VED H MH+E
Sbjct: 251 YGDRPGAVAAPTAGLHFTEQLFQRLSQQHIDHAFVTLHVGLGTFRPVEVEDITTHQMHAE 310
Query: 244 IGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE--TATTEDG--IINPWSGFTNIFITP 299
+ T + +N ++RGGRI++VGTT +R LE A G I P+ G N+FI P
Sbjct: 311 WVELPPETVEKINQTRARGGRIIAVGTTVVRTLEGIAAAQNSGDRSIQPYCGEINLFIYP 370
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISH-------AYRFYSYGD 352
GYR+R +D L++NFHLP+S+LLMLVSA G E K+YQ A+ YRFYS+GD
Sbjct: 371 GYRWRVIDGLITNFHLPRSSLLMLVSALIGRERLMKLYQDALEQPPNDFGNRYRFYSFGD 430
Query: 353 TSLLFQ 358
L+
Sbjct: 431 AMLILP 436
>gi|323343219|ref|ZP_08083450.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Erysipelothrix rhusiopathiae ATCC 19414]
gi|322463283|gb|EFY08478.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Erysipelothrix rhusiopathiae ATCC 19414]
Length = 343
Score = 442 bits (1138), Expect = e-122, Method: Composition-based stats.
Identities = 144/356 (40%), Positives = 198/356 (55%), Gaps = 19/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDFDLP IA P R +RL+VV + + D ++ +LN D +V
Sbjct: 1 MNVNDFDFDLPEELIAQTPAEKRSESRLLVVDG-----MNLEDKRFYNIIDYLNEGDVLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G + + + + +KV+K G L F
Sbjct: 56 LNDTRVIAARLFGEK----PETGAHVELLILK-FEGKTAECLVGNAKVVKLGTELSF--- 107
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G +L+A + G GI LE + +G +PLPPYI + D Y
Sbjct: 108 -GDGQLKAICTHVGDEGLRNFDLIFDGIFLE-ILDELGQMPLPPYIHER----LEDKERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++++GS AAPTAGLHFT LL + + GI + VTLHVG GTF PVKV++ +H M
Sbjct: 162 QTVYSRVEGSAAAPTAGLHFTPELLDAIQAKGITIAPVTLHVGLGTFRPVKVDNVLEHKM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN+ K G RI++VGTTS+R LET ++ G G + IFI PG
Sbjct: 222 HSEAYTMTQDTADILNTAKREGRRIIAVGTTSVRTLETVMSKYGTFKECQGNSEIFIYPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y ++AVD +++NFHLPKSTL+MLVSAF G EE Y+HA+ YRF+S+GD+ L
Sbjct: 282 YEWKAVDAIITNFHLPKSTLIMLVSAFMGKEEIDHAYKHAVDSKYRFFSFGDSMFL 337
>gi|89072679|ref|ZP_01159244.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Photobacterium sp. SKA34]
gi|89051499|gb|EAR56953.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Photobacterium sp. SKA34]
Length = 350
Score = 442 bits (1138), Expect = e-122, Method: Composition-based stats.
Identities = 141/363 (38%), Positives = 202/363 (55%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDFDLP IA P R ++RL+ + N ++ D+ + + D +V
Sbjct: 1 MQVSDFDFDLPDELIARYPQPERTASRLLQMTGNTG---ELAHKGFKDVLDLVQAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + S + R SK K G+ L
Sbjct: 58 FNNTRVIPARMFGHKAS-----GGKIEVLVERMLDDKSILAHVRASKPPKPGNELLLGE- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
A ++ + + + + S + + VG +PLPPYI RP + D Y
Sbjct: 112 --NGEFSAEMVARHDA--LFEIRFNSDKTVLEILDAVGHMPLPPYI--DRPDEDTDKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y G+VAAPTAGLHF L++ L + G+ FVTLHVGAGTF PV+V+D +DH M
Sbjct: 166 QTVYNTKPGAVAAPTAGLHFDDKLMANLKAKGVNFAFVTLHVGAGTFQPVRVDDINDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED----GIINPWSGFTNIF 296
HSE + A+N ++ GGRI++VGTTS+R LE+A + P+ G T IF
Sbjct: 226 HSEYVEVPEEVVTAVNETRANGGRIIAVGTTSVRSLESAAQDAIKNCTEFKPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+F+ VD L++NFHLP+STL+MLVSAF G E T Y A+++ YRF+SYGD+ +
Sbjct: 286 IYPGYQFQLVDALITNFHLPESTLIMLVSAFAGYENTMNAYHEAVANRYRFFSYGDSMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 TRK 348
>gi|32034120|ref|ZP_00134352.1| COG0809: S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
(queuine synthetase) [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|126208243|ref|YP_001053468.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae L20]
gi|166216694|sp|A3N0C7|QUEA_ACTP2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|126097035|gb|ABN73863.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 5b str. L20]
Length = 361
Score = 442 bits (1138), Expect = e-122, Method: Composition-based stats.
Identities = 135/364 (37%), Positives = 198/364 (54%), Gaps = 18/364 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +F FDLP IA P R ++RL+ ++ D DL +N D ++
Sbjct: 1 MLVSDFHFDLPDELIARYPTEERTASRLLHLNGETG---HFEDKQFFDLLDQINEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARLYGRKAS-----GGKLEILVERVLDEHRCLAHVRASKAPKEGAELVLGED 112
Query: 121 DGQSR--LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+A + + + + + L + G +PLPPYI RP + D
Sbjct: 113 KLGEGNGFKAIMTARHDA--LFELHFNEEQPLFDLLQQAGHMPLPPYI--DRPDEDADQE 168
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y+K+ G+VAAPTAGLHF + L +L + G+ + FVTLHVGAGTF PV+V++ DH
Sbjct: 169 RYQTVYSKVLGAVAAPTAGLHFDNPTLEKLKAKGVNIAFVTLHVGAGTFQPVRVDNILDH 228
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTN 294
MH+E + + + K+ G R+++VGTTS+R +E+A E +I P+ T+
Sbjct: 229 KMHAEYAEVSQAVVDQILATKATGKRVIAVGTTSVRSIESAAQAAEKEGKLITPFFSDTS 288
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IF+ PG FR VD L++NFHLP+STL+MLVSAF G T K YQHA+ YRF+SYGD
Sbjct: 289 IFLYPGKTFRIVDALVTNFHLPESTLIMLVSAFAGYRNTMKAYQHAVEAKYRFFSYGDAM 348
Query: 355 LLFQ 358
+ +
Sbjct: 349 FINK 352
>gi|86145575|ref|ZP_01063905.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio sp.
MED222]
gi|85836546|gb|EAQ54672.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio sp.
MED222]
Length = 350
Score = 442 bits (1138), Expect = e-122, Method: Composition-based stats.
Identities = 138/363 (38%), Positives = 204/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ + N ++D D+ + D ++
Sbjct: 1 MQVSDFHFDLPDELIARYPQEERTASRLLKLDGNNGN---LADGSFKDVLDLVEPGDLVI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + S + R SK K G L
Sbjct: 58 FNNTRVIPARVFGRKAS-----GGKLEVLVERMLDEKSILAHVRCSKSPKPGTKLFLGEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D EA ++ + + + + S + ++ VG +PLPPYI RP + D Y
Sbjct: 113 D---EYEAEMVARHDA--LFEIHFTSDQSVLEILNSVGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF L++ + G++ +VTLHVGAGTF PVKV++ +DH M
Sbjct: 166 QTVYNEKPGAVAAPTAGLHFDDKLMADMKEKGVEFAYVTLHVGAGTFQPVKVDNINDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT---EDG-IINPWSGFTNIF 296
H+E + A+ + K+RGGRI++VGTTS+R LE+A ++G + P+ G T IF
Sbjct: 226 HAEYVEVPQEVVDAVAAAKARGGRIIAVGTTSVRSLESAAQDAVKNGTELVPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY ++ VD L++NFHLP+STL+MLVSAF G + Y HA+ YRF+SYGD +
Sbjct: 286 IFPGYEYQLVDCLITNFHLPESTLIMLVSAFAGYDNVMGAYDHAVKSEYRFFSYGDAMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 NKK 348
>gi|165976181|ref|YP_001651774.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 3 str. JL03]
gi|226713832|sp|B0BP45|QUEA_ACTPJ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|165876282|gb|ABY69330.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 3 str. JL03]
Length = 361
Score = 442 bits (1138), Expect = e-122, Method: Composition-based stats.
Identities = 134/364 (36%), Positives = 198/364 (54%), Gaps = 18/364 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +F FDLP IA P R ++RL+ ++ D DL +N D ++
Sbjct: 1 MLVSDFHFDLPDELIARYPTEERTASRLLHLNGETG---HFEDKQFFDLLDQINEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARLYGRKAS-----GGKLEVLVERVLDEHRCLAHVRASKAPKEGAELVLGED 112
Query: 121 DGQSR--LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+A + + + + + + + G +PLPPYI RP + D
Sbjct: 113 KLGEGNGFKAIMTARHDA--LFELHFNEEQPVFDLLQQAGHMPLPPYI--DRPDEDADQE 168
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y+K+ G+VAAPTAGLHF + L +L + G+ + FVTLHVGAGTF PV+V++ DH
Sbjct: 169 RYQTVYSKVLGAVAAPTAGLHFDNPTLEKLKAKGVNIAFVTLHVGAGTFQPVRVDNILDH 228
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTN 294
MH+E + + + K+ G R+++VGTTS+R +E+A E +I P+ T+
Sbjct: 229 KMHAEYAEVSQAVVDQILATKATGKRVIAVGTTSVRSIESAAQAAEKEGKLIAPFFSDTS 288
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IF+ PG FR VD L++NFHLP+STL+MLVSAF G T K YQHA+ YRF+SYGD
Sbjct: 289 IFLYPGKTFRVVDALVTNFHLPESTLIMLVSAFAGYRNTMKAYQHAVEAKYRFFSYGDAM 348
Query: 355 LLFQ 358
+ +
Sbjct: 349 FINK 352
>gi|182679292|ref|YP_001833438.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Beijerinckia indica subsp. indica ATCC 9039]
gi|238691230|sp|B2IHG4|QUEA_BEII9 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|182635175|gb|ACB95949.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Beijerinckia indica subsp. indica ATCC 9039]
Length = 367
Score = 442 bits (1138), Expect = e-122, Method: Composition-based stats.
Identities = 185/361 (51%), Positives = 251/361 (69%), Gaps = 8/361 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLPP RIALRPV PRD++RL+VV P+ ++DH + +LP FL + D +V
Sbjct: 1 MRVDLFDFDLPPERIALRPVEPRDASRLLVVRPDSGD---MTDHGMRELPDFLRAGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L+G R +R +I TLH R W + +P+K ++ G+ + F Q
Sbjct: 58 VNDTRVIPARLHGFRSRGESR--AKIEATLHKREGEALWRAFVKPAKKLRVGETICFARQ 115
Query: 121 DGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+ LEA V++K GE++L F+ +G L+ + L+G +PLPPYIA KR D++D
Sbjct: 116 EPGTEVESLEAEVLEKGAEGEVVLGFNRAGAALDAALDLLGEMPLPPYIAGKRAPDSQDS 175
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
+DYQT +A G+VAAPTA LHFT L++ + + G+ + VTLHVGAGTF+PVK EDTD
Sbjct: 176 LDYQTLFANRSGAVAAPTASLHFTPRLIAAIEARGVTICKVTLHVGAGTFLPVKAEDTDA 235
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+E G + A A LN V + GGRI++ GTTSLRLLE+A EDG+I P+ G T+IF+
Sbjct: 236 HRMHAEWGEVSAEVAAFLNKVHAAGGRIIAAGTTSLRLLESAVDEDGLIQPFQGETSIFM 295
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPG+RFRAVDIL++NFHLP+STL MLV AF G+E ++ Y HAI+ +YRFYSYGD LLF
Sbjct: 296 TPGFRFRAVDILLTNFHLPRSTLFMLVCAFAGLETMRRAYAHAIAASYRFYSYGDACLLF 355
Query: 358 Q 358
+
Sbjct: 356 R 356
>gi|239809481|gb|ACS26207.1| unknown [uncultured bacterium]
Length = 349
Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats.
Identities = 146/358 (40%), Positives = 200/358 (55%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F LP + IA P+ R ++RL+V+ +S +DL + D +V
Sbjct: 1 MQVADFFFQLPDALIARHPLAERRASRLLVLEGETGK---LSHRNFADLLDHVRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + V S + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKA-----TGGKLEILVERVVGNRSVLAHVRSSKSPKAGSKILL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
EA +I + + L ++ + +G +PLPPYI RP DA D Y
Sbjct: 110 --DGGGEAKMIARHDA---LFELEFD-EDVLPLLERIGHMPLPPYI--DRPDDAADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL L G++ +VTLHVGAGTF PV+VE ++H M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDEALLQMLRESGVETAYVTLHVGAGTFQPVRVERIEEHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A+ + +SRGGR+++VGTTS+R LETA DG + P+SG T+IFI PG
Sbjct: 222 HREWLEVGQDVVDAVAACRSRGGRVIAVGTTSVRSLETAAR-DGELKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y A++ YRF+SYGD + +
Sbjct: 281 KSFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAEAVAQRYRFFSYGDAMFITR 338
>gi|15643340|ref|NP_228384.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Thermotoga
maritima MSB8]
gi|7674170|sp|Q9WZ44|QUEA_THEMA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|4981091|gb|AAD35659.1|AE001732_4 S-adenosylmethionine tRNA ribosyltransferase [Thermotoga maritima
MSB8]
Length = 335
Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats.
Identities = 142/357 (39%), Positives = 194/357 (54%), Gaps = 22/357 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V EFD++LPP IA PV PRD++RLMV+H I + ++ +L D +V
Sbjct: 1 MKVSEFDYELPPELIAQEPVEPRDASRLMVLHRKTQ---RIEHRIFREIIEYLEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N +KVI A+L + + I L R+ W RP + +KKG L
Sbjct: 58 LNVSKVIPARLYARK-----KTGASIEILLIERLEEGIWKCLVRPGQKVKKGTELVI--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A + + G +L F +R I G PLPPYI + P+ Y
Sbjct: 110 --DEDLSAVCLGRGEDGTRILKFQPQD---DRLIFEKGRTPLPPYIKNEVPL-----ERY 159
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GSVAAPTAGLHFT L+ +L G++ V LHVG GTF PVKVE+ + H M
Sbjct: 160 QTVYAKEEGSVAAPTAGLHFTPELIEKLKKKGVQFAEVVLHVGIGTFRPVKVEEVEKHKM 219
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + T + L + RG RIV+VGTT++R LET + G T++FI P
Sbjct: 220 HEEFYQVPKETVRKLRETRERGNRIVAVGTTTVRTLETIARLPEQ-EEYVGKTDLFIYPP 278
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+ VD L++NFHLP+STLLMLV+AF G + + Y+ A+ YRF+S+GD L+
Sbjct: 279 FEFKLVDALVTNFHLPRSTLLMLVAAFAGKDFVMEAYREAVKRRYRFFSFGDAMLIL 335
>gi|167646153|ref|YP_001683816.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Caulobacter
sp. K31]
gi|189038513|sp|B0T8H5|QUEA_CAUSK RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|167348583|gb|ABZ71318.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Caulobacter sp. K31]
Length = 373
Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats.
Identities = 199/366 (54%), Positives = 248/366 (67%), Gaps = 12/366 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP + IALRP PRDSARL+VV P + D +V DLP FL DA+V
Sbjct: 1 MRLSDFDFHLPDAAIALRPAEPRDSARLLVVRPGEG----LEDRIVRDLPDFLRPGDALV 56
Query: 61 FNNTKVITAQLNGVRFC----HINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
FN+T+VI A+L G R + + TLH R++P+ W + RP K +K+GD +
Sbjct: 57 FNDTRVIPARLMGRRAGRETGGGDGSPVAVEATLHRRIAPDRWVAFMRPGKRLKEGDRIA 116
Query: 117 FFSQDGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
F + L+ATVI K GEI L F +G++L+ ++ G +PLPPYIA KR
Sbjct: 117 FGHDQDRACQAGMLDATVIAKHEGGEIELAFDFAGVDLDLAVAAHGEMPLPPYIAAKRAE 176
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D RD DYQT YA+ GSVAAPTAGLHFTS+LL RL + G+ ++FVTLHVGAGTF+PVK
Sbjct: 177 DDRDRADYQTVYAREDGSVAAPTAGLHFTSDLLERLKAGGVSLHFVTLHVGAGTFLPVKT 236
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+ DH MH+E G + A A ALN+ ++ GGRIV VGTTSLRLLE+AT ED II P++
Sbjct: 237 DVVADHKMHAEFGEVPAAVADALNAARAAGGRIVCVGTTSLRLLESATGEDRIIKPFADE 296
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T IFITPGYRFRA D+LM+NFHLPKSTL MLVSAF G K Y+HAI+ YRFYSYGD
Sbjct: 297 TAIFITPGYRFRAADVLMTNFHLPKSTLFMLVSAFAGQATMKAAYEHAIAAGYRFYSYGD 356
Query: 353 TSLLFQ 358
SLLF+
Sbjct: 357 GSLLFR 362
>gi|239998177|ref|ZP_04718101.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae 35/02]
gi|240015804|ref|ZP_04722344.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae FA6140]
gi|240079942|ref|ZP_04724485.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae FA19]
gi|240112149|ref|ZP_04726639.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae MS11]
gi|240117099|ref|ZP_04731161.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae PID1]
gi|240122734|ref|ZP_04735690.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae PID332]
gi|240124926|ref|ZP_04737812.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae SK-92-679]
gi|240127437|ref|ZP_04740098.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae SK-93-1035]
gi|254492954|ref|ZP_05106125.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae 1291]
gi|260441289|ref|ZP_05795105.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae DGI2]
gi|268594029|ref|ZP_06128196.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae 35/02]
gi|268596081|ref|ZP_06130248.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae FA19]
gi|268598206|ref|ZP_06132373.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae MS11]
gi|268602784|ref|ZP_06136951.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae PID1]
gi|268681333|ref|ZP_06148195.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae PID332]
gi|268683504|ref|ZP_06150366.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae SK-92-679]
gi|268685810|ref|ZP_06152672.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae SK-93-1035]
gi|226511994|gb|EEH61339.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae 1291]
gi|268547418|gb|EEZ42836.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae 35/02]
gi|268549869|gb|EEZ44888.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae FA19]
gi|268582337|gb|EEZ47013.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae MS11]
gi|268586915|gb|EEZ51591.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae PID1]
gi|268621617|gb|EEZ54017.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae PID332]
gi|268623788|gb|EEZ56188.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae SK-92-679]
gi|268626094|gb|EEZ58494.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae SK-93-1035]
Length = 346
Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats.
Identities = 152/360 (42%), Positives = 208/360 (57%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P+ + + D + DLP ++ + D +V
Sbjct: 1 MDISDFDFTLPEHLIAQHPPEVRGSSRLLVALPD----MPLQDRVFGDLPDYVEAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 109 --EGGIRAVMVGR--EGELFCLRFEGGQTVYELLEQNGHLPLPPYI--ERAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + T A+ + K+RG + +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 223 HSEWFEVPSETVAAVEAAKARGNKAWAVGTTSMRALESAARATGYLKDGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRF VD L++NFHLPKSTLLMLV AF G+ + +Y+HAI YRF+SYGD +L +
Sbjct: 283 YRFNVVDRLVTNFHLPKSTLLMLVGAFSGMGHIRAVYRHAIEREYRFFSYGDAMVLGRNE 342
>gi|77919491|ref|YP_357306.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pelobacter
carbinolicus DSM 2380]
gi|91207389|sp|Q3A3C1|QUEA_PELCD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|77545574|gb|ABA89136.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Pelobacter
carbinolicus DSM 2380]
Length = 343
Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats.
Identities = 136/359 (37%), Positives = 201/359 (55%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF+LP IA P+ R ++RLMV++ + +D+ + D +V
Sbjct: 1 MRLSDFDFELPEELIAQHPLAQRQASRLMVLNRVTQQLQL---AQFADIADWFRPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVS--PNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L G + + I L R+ W+ + SK + G L
Sbjct: 58 VNDTRVIPARLIGRK-----QTGGRIEVFLVRRLPGVEEVWACLTKCSKSPRPGTRLILG 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
LE TV++ + FS G + + + VG IPLPPYI R+ D D
Sbjct: 113 EG-----LEGTVVEGGEPPYRHVRFSFQG-DFSQVLEQVGRIPLPPYIRREATPD--DRS 164
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT +A+ G+VAAPTAGLHFT +L L + G+++ +TLHVG GTF+P++ +D +H
Sbjct: 165 RYQTVFAREAGAVAAPTAGLHFTDEILDVLRAKGVEIQPLTLHVGLGTFLPMRTDDITEH 224
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH E F+ TA A+N K G R++++GTTS R LE A E G + +G ++FI
Sbjct: 225 RMHEENYFVPEGTAAAVNRAKDDGRRVIALGTTSTRTLEYAVDEQGRLQAGAGTCDLFIR 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++FR VD L++NFHLP STLL+LV+A G E + YQ A++ +RF+SYGD L+
Sbjct: 285 PGFKFRIVDGLVTNFHLPCSTLLVLVAALAGREFILEAYQRAVAEKFRFFSYGDCMLIL 343
>gi|88706927|ref|ZP_01104626.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Congregibacter litoralis KT71]
gi|88698849|gb|EAQ95969.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Congregibacter litoralis KT71]
Length = 352
Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats.
Identities = 143/359 (39%), Positives = 199/359 (55%), Gaps = 13/359 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R ++RL+ V+ + +DLP LN+ D +V
Sbjct: 1 MQRSDFSYDLPQELIAQTPLAERSASRLLCVN---GMQKSFEHKVFTDLPEQLNAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+V+ A+L GV+ + + S + R SK K G + +
Sbjct: 58 FNNTRVLPARLFGVKE-----TGGRVEILIERLTGDCSALAHIRASKTPKPGMSIALAAD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + + GE L S L ++ +G +PLPPYI R A D Y
Sbjct: 113 VDSPATDVRLTVQGREGE--LFKITSAESLGPLLARIGHMPLPPYI--DRADAAEDKERY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL RL ++G++ VTLHVGAGTF PV+ +D DH M
Sbjct: 169 QTVYAQRDGAVAAPTAGLHFDEALLKRLDALGVRRAEVTLHVGAGTFQPVRSDDIRDHEM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E +D A+ + ++RGGR+V+VGTT++R LETA G + P+ G T +FI PG
Sbjct: 229 HAEYLEVDQAVCDAVEATRARGGRVVAVGTTAVRSLETAAAS-GRLGPYVGDTQLFIYPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRF VD +++NFHLP+STLLMLVSAF G + Y A+ YRF+SYGD L +
Sbjct: 288 YRFHCVDAMVTNFHLPESTLLMLVSAFSGKDLMLAAYNEAVKERYRFFSYGDAMFLTPQ 346
>gi|75675988|ref|YP_318409.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Nitrobacter
winogradskyi Nb-255]
gi|91207388|sp|Q3SRN4|QUEA_NITWN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|74420858|gb|ABA05057.1| Queuosine biosynthesis protein [Nitrobacter winogradskyi Nb-255]
Length = 360
Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats.
Identities = 193/363 (53%), Positives = 241/363 (66%), Gaps = 9/363 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M FDF+LP IALRP PRDSAR++VV P + D VSDLP +L D +V
Sbjct: 1 MRTDLFDFELPAGSIALRPASPRDSARMLVVQPGSG----VRDQQVSDLPEWLRPGDQLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI AQL+G R E I TL R+ + WS RP++ + GDI+ ++
Sbjct: 57 VNDTRVIAAQLHGRRI--GREAEPRIDATLIKRLDGSRWSALVRPARKLMAGDIVRLGNE 114
Query: 121 D---GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+A V K GE+ FS G L++ I+ +G+ PLPPYIA KR D RD
Sbjct: 115 GRVCFLGHLDARVESKGEEGEVTFAFSFHGPMLDQAIAELGSTPLPPYIASKRAPDDRDA 174
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT +A +G+VAAPTAGLHFT + + L G+ ++ +TLHVGAGTF+PVKV+DT
Sbjct: 175 SDYQTMFATHEGAVAAPTAGLHFTPEIETALRGRGVGLHRITLHVGAGTFLPVKVDDTAG 234
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MHSE G I TA ALN+ +SRGGRIV+VGTTSLRLLE+A +DG I P++G T IFI
Sbjct: 235 HRMHSEWGAISTETADALNAARSRGGRIVAVGTTSLRLLESAADDDGRIKPFTGETAIFI 294
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPG+RFRAVDILM+NFHLP+STL MLVSAF G+E K+ Y HAIS YRFYSYGD LLF
Sbjct: 295 TPGHRFRAVDILMTNFHLPRSTLFMLVSAFSGLETMKQAYAHAISAGYRFYSYGDACLLF 354
Query: 358 QKR 360
+R
Sbjct: 355 PER 357
>gi|90579387|ref|ZP_01235197.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
angustum S14]
gi|90440220|gb|EAS65401.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
angustum S14]
Length = 350
Score = 442 bits (1137), Expect = e-122, Method: Composition-based stats.
Identities = 142/363 (39%), Positives = 205/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDFDLP IA P R ++RL+ + N ++ D+ + + D +V
Sbjct: 1 MQVSDFDFDLPDELIARYPQPERTASRLLQMTGNTG---ELAHKGFKDVLDLVQAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + S + R SK K G+ L
Sbjct: 58 FNNTRVIPARMFGHKAS-----GGKIEVLVERMLDDKSILAHVRASKPPKPGNELLLGE- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
A ++ + + + + S + + VG +PLPPYI RP + D Y
Sbjct: 112 --NGEFSAEMVARHDA--LFEIRFNSDKTVLEILDAVGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y G+VAAPTAGLHF L++ L + G+ FVTLHVGAGTF PV+V+D +DH M
Sbjct: 166 QTVYNAKPGAVAAPTAGLHFDDKLMADLKAKGVNFAFVTLHVGAGTFQPVRVDDINDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT---EDG-IINPWSGFTNIF 296
HSE + A+N ++ GGRI++VGTTS+R LE+A ++G P+ G T IF
Sbjct: 226 HSEYVEVPEEVVTAVNETRANGGRIIAVGTTSVRSLESAAQDALKNGTEFKPFFGDTEIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+F+ VD+L++NFHLP+STL+MLVSAF G E T Y A+++ YRF+SYGD+ +
Sbjct: 286 IYPGYQFQLVDVLITNFHLPESTLIMLVSAFAGYENTMNAYHEAVANKYRFFSYGDSMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 TRK 348
>gi|284052392|ref|ZP_06382602.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Arthrospira
platensis str. Paraca]
Length = 405
Score = 441 bits (1136), Expect = e-122, Method: Composition-based stats.
Identities = 160/366 (43%), Positives = 203/366 (55%), Gaps = 26/366 (7%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
+D++LPP RIA PV PRDS+RL+VV P L DLP L D ++ NNT+
Sbjct: 48 YDYELPPDRIAQNPVIPRDSSRLLVVD----SPQSHQHRLFRDLPDLLQPQDLLILNNTR 103
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSR 125
V+ A+L G + R I L +PN W +P K K GD L F S+ G
Sbjct: 104 VLPARLYGRK-----SRSAAIEILLLQEQAPNCWLALVKPGKRFKIGDRLEFQSKSGGEI 158
Query: 126 LEATVIDKWN-TGEILLVFSIS-GIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTT 183
L ATVID TG LL F + G L + G IP PPY+ + + + YQT
Sbjct: 159 LYATVIDTNPSTGGRLLKFEVPQGQSLVSILDQFGEIPFPPYVTDSQALAEQ----YQTI 214
Query: 184 YAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSE 243
Y G+VAAPTAGLHFT L RL I FVTLHVG GTF PV+VED H MH+E
Sbjct: 215 YGDRPGAVAAPTAGLHFTEQLFQRLSQQHIDHAFVTLHVGLGTFRPVEVEDITTHQMHAE 274
Query: 244 IGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE--TATTEDG--IINPWSGFTNIFITP 299
+ T + +N ++RGGRI++VGTT +R LE A G I P+ G N+FI P
Sbjct: 275 WVELPPETVEKINQTRARGGRIIAVGTTVVRTLEGIAAAQNSGDRSIQPYCGEINLFIYP 334
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISH-------AYRFYSYGD 352
GYR+R +D L++NFHLP+S+LLMLVSA G E K+YQ A+ YRFYS+GD
Sbjct: 335 GYRWRVIDGLITNFHLPRSSLLMLVSALIGRERLMKLYQDALEQPPNDFGNRYRFYSFGD 394
Query: 353 TSLLFQ 358
L+
Sbjct: 395 AMLILP 400
>gi|298369998|ref|ZP_06981314.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
sp. oral taxon 014 str. F0314]
gi|298281458|gb|EFI22947.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
sp. oral taxon 014 str. F0314]
Length = 343
Score = 441 bits (1136), Expect = e-122, Method: Composition-based stats.
Identities = 155/358 (43%), Positives = 216/358 (60%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP + IA P R +RL+ P+ + + D SDLP ++ + D +V
Sbjct: 1 MDISDFDFDLPQALIAQHPPKVRGGSRLLAALPD----MPLQDAAFSDLPDYIGAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + +I + + ++ + R SK K G +L F
Sbjct: 57 FNNTKVMKARLFGQKES-----GGKIEALIERVLDGHTALAHIRSSKSPKAGTVLIF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A +I++ G++ + G + + G +PLPPYI +R D D Y
Sbjct: 109 --EGGIRAVMIER--AGDLFCLRFDCGQTVYELLEQNGRLPLPPYI--ERAADDDDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL + G++ VTLHVGAGTF PV+V + DH M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTDELLGRLKAKGVETAEVTLHVGAGTFQPVRVSNIADHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + T A+ + ++RGGR+ +VGTTS+R LE+A E G + G T+IFITPG
Sbjct: 223 HSEWFDVPPETVAAIEAAQARGGRVWAVGTTSMRALESAARETGRLKAGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRF D L++NFHLPKSTLLMLV+AF G+E + +Y+HA+ H YRF+SYGD LL +
Sbjct: 283 YRFNVADRLITNFHLPKSTLLMLVAAFSGMEHIRAVYRHAVEHEYRFFSYGDAMLLGR 340
>gi|190150095|ref|YP_001968620.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase
[Actinobacillus pleuropneumoniae serovar 7 str. AP76]
gi|307256789|ref|ZP_07538568.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 10 str. D13039]
gi|307261247|ref|ZP_07542922.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 12 str. 1096]
gi|307263429|ref|ZP_07545045.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 13 str. N273]
gi|238692337|sp|B3GXL9|QUEA_ACTP7 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|189915226|gb|ACE61478.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase
[Actinobacillus pleuropneumoniae serovar 7 str. AP76]
gi|306864837|gb|EFM96741.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 10 str. D13039]
gi|306868978|gb|EFN00780.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 12 str. 1096]
gi|306871307|gb|EFN03035.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 13 str. N273]
Length = 361
Score = 441 bits (1136), Expect = e-122, Method: Composition-based stats.
Identities = 134/364 (36%), Positives = 198/364 (54%), Gaps = 18/364 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +F FDLP IA P R ++RL+ ++ D DL +N D ++
Sbjct: 1 MLVSDFHFDLPDELIARYPTEERTASRLLHLNGETG---HFEDKQFFDLLDQINEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARLYGRKAS-----GGKLEVLVERVLDEHRCLAHVRASKAPKEGAELVLGED 112
Query: 121 DGQSR--LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+A + + + + + + + G +PLPPYI RP + D
Sbjct: 113 KLGEGNGFKAIMTARHDA--LFELHFNEEQPVFDLLQQAGHMPLPPYI--DRPDEDADQE 168
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y+K+ G+VAAPTAGLHF + L +L + G+ + FVTLHVGAGTF PV+V++ DH
Sbjct: 169 RYQTVYSKVLGAVAAPTAGLHFDNPTLEKLKAKGVNIAFVTLHVGAGTFQPVRVDNILDH 228
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTN 294
MH+E + + + K+ G R+++VGTTS+R +E+A E +I P+ T+
Sbjct: 229 KMHAEYAEVSQAVVDQILATKATGKRVIAVGTTSVRSIESAAQAAEKEGKLIAPFFSDTS 288
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IF+ PG FR VD L++NFHLP+STL+MLVSAF G T K YQHA+ YRF+SYGD
Sbjct: 289 IFLYPGKTFRIVDALVTNFHLPESTLIMLVSAFAGYRNTMKAYQHAVEAKYRFFSYGDAM 348
Query: 355 LLFQ 358
+ +
Sbjct: 349 FINK 352
>gi|269103295|ref|ZP_06155992.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Photobacterium damselae subsp. damselae CIP 102761]
gi|268163193|gb|EEZ41689.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Photobacterium damselae subsp. damselae CIP 102761]
Length = 351
Score = 441 bits (1136), Expect = e-122, Method: Composition-based stats.
Identities = 145/363 (39%), Positives = 206/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDFDLP IA P R S+RL+ + N I+ D+ +N D ++
Sbjct: 2 MQVSDFDFDLPDELIARYPQPERTSSRLLQLDGNSGD---IAHKTFKDVLDLVNPGDLMI 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + + S + R SK K G L
Sbjct: 59 FNNTRVIPARMFGRKAS-----GGKLEVLVERMLDEKSILAHVRASKSPKPGTELLLGEN 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D A ++ + + + + S + + VG +PLPPYI RP + D Y
Sbjct: 114 D---EYSAEMVARHDA--LFEIRFNSDKTVLEILDEVGHMPLPPYI--DRPDEDADKERY 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y G+VAAPTAGLHF LL+ L G+ FVTLHVGAGTF PV+V++ DDH M
Sbjct: 167 QTVYNAKPGAVAAPTAGLHFDDALLAALKEKGVNFAFVTLHVGAGTFQPVRVDNIDDHHM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT---EDG-IINPWSGFTNIF 296
HSE + A+N K+ GGR+V+VGTTS+R LE+A ++G + P+ G T IF
Sbjct: 227 HSEYVEVPEEVVTAINETKANGGRVVAVGTTSVRSLESAAQDAVKNGTELKPFFGDTEIF 286
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+F+ VD+L++NFHLP+STL+MLVSAF G E T Y+ A+++ +RF+SYGD+ +
Sbjct: 287 IFPGYQFQLVDVLITNFHLPESTLIMLVSAFAGYEHTMNAYKDAVANQFRFFSYGDSMFV 346
Query: 357 FQK 359
+K
Sbjct: 347 TRK 349
>gi|269138314|ref|YP_003295014.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Edwardsiella tarda EIB202]
gi|267983974|gb|ACY83803.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Edwardsiella tarda EIB202]
gi|304558345|gb|ADM41009.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Edwardsiella tarda FL6-60]
Length = 357
Score = 441 bits (1136), Expect = e-122, Method: Composition-based stats.
Identities = 138/360 (38%), Positives = 198/360 (55%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R RL+ + + +D+ LN D +V
Sbjct: 1 MRVSDFTFELPDELIARYPQEQRSGCRLLSLDGPTGAR---EHGVFTDIVDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKTS-----GGKVEVLVERVLDRARVLAHVRASKAPKPGAELLLGDN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT++ + + + + ++ ++ G +PLPPYI RP D D Y
Sbjct: 113 ED---IRATMLARHDA--LFELGFDDPRDVLAILNAAGHMPLPPYI--DRPDDEADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+ G+VAAPTAGLHF LL RL GI++ FVTLHVGAGTF PV+VE +DHIM
Sbjct: 166 QTVYSSRPGAVAAPTAGLHFDQPLLDRLRDKGIEMAFVTLHVGAGTFQPVRVESIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE--TATTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE A ++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLACKARGNRVIAVGTTSVRSLESAAAASKQALIAPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ +D L++NFHLP+STL+MLVSAF G T Y+ A++ YRF+SYGD + +
Sbjct: 286 PGYHYQVIDALITNFHLPESTLIMLVSAFAGYRHTLDAYRDAVARQYRFFSYGDAMYITR 345
>gi|241759145|ref|ZP_04757253.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
flavescens SK114]
gi|241320564|gb|EER56841.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
flavescens SK114]
Length = 363
Score = 441 bits (1135), Expect = e-122, Method: Composition-based stats.
Identities = 152/356 (42%), Positives = 210/356 (58%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF+LP IA P R S+RL+V P L I D DLP ++ D +V
Sbjct: 22 MDISDFDFELPEKLIAQHPPEVRGSSRLLVALP----TLPIEDKHFGDLPDYVAPGDVLV 77
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + +I + + ++ + R SK K G L F
Sbjct: 78 FNNTKVMKARLFGQKAS-----GGKIEALIERVLDTHTALAHIRSSKSPKPGTELIF--- 129
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++++ E+ + + + G +PLPPYI +R D D Y
Sbjct: 130 --EGDIRAVMMERAE--ELFCLKFEGEQTVYELLEQNGHLPLPPYI--ERAADDEDDSRY 183
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL + G++ VTLHVGAGTF PV+V+ ++H M
Sbjct: 184 QTVYAKYQGAVAAPTAGLHFTDELLGRLKAKGVETAEVTLHVGAGTFQPVRVDKIEEHKM 243
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A T A+ + K+RG ++ +VGTTS+R LE+A E G + G T+IFITPG
Sbjct: 244 HSEWFDVPAETVAAVEAAKARGNKVWAVGTTSMRALESAARETGRLKAGRGDTDIFITPG 303
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF D L++NFHLPKSTLLMLVSAF G+E + +Y++A+ YRF+SYGD +L
Sbjct: 304 YRFNVADRLITNFHLPKSTLLMLVSAFSGMEHIRSVYRYAVEQEYRFFSYGDAMIL 359
>gi|238918971|ref|YP_002932485.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Edwardsiella ictaluri 93-146]
gi|259551449|sp|C5BCF6|QUEA_EDWI9 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|238868539|gb|ACR68250.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase, putative
[Edwardsiella ictaluri 93-146]
Length = 357
Score = 441 bits (1135), Expect = e-122, Method: Composition-based stats.
Identities = 135/360 (37%), Positives = 196/360 (54%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R RL+ + + +D+ LN D +V
Sbjct: 1 MRVSDFTFELPDELIARYPQEQRSGCRLLSLDGPTGAR---QHGVFTDIVDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKVEVLVERVLDRTRVLAHVRASKAPKPGAGLLLGDN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT++ + + + + ++ ++ G +PLPPYI RP + D Y
Sbjct: 113 ED---IRATMLARHDA--LFELGFDDPRDVLTILNAAGHMPLPPYI--DRPDEEADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+ G+VAAPTAGLHF LL RL G+++ FVTLHVGAGTF PV+VE +DH+M
Sbjct: 166 QTVYSSRPGAVAAPTAGLHFDQPLLDRLRDKGVEMAFVTLHVGAGTFQPVRVESIEDHVM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI--INPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A + I P+ T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLACKARGNRVIAVGTTSVRSLESAAAANKQALIAPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ +D L++NFHLP+STL+MLVSAF G T Y+ A+ YRF+SYGD + +
Sbjct: 286 PGYHYQVIDALITNFHLPESTLIMLVSAFAGYRHTLDAYRDAVVQQYRFFSYGDAMYITR 345
>gi|304395468|ref|ZP_07377351.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Pantoea sp.
aB]
gi|304356762|gb|EFM21126.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Pantoea sp.
aB]
Length = 356
Score = 441 bits (1135), Expect = e-122, Method: Composition-based stats.
Identities = 136/358 (37%), Positives = 201/358 (56%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + +S + +D+ LN D +V
Sbjct: 1 MRVADFAFELPESLIAHYPQAQRSGCRLLSLDGPSGA---LSHGVFTDVLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARVFGRKAS-----GGKIEMLVERMLDDKRVLAHVRASKAPKPGAELLLGED 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++AT++ + + ++ + ++ VG +PLPPYI RP + D Y
Sbjct: 113 E---SVKATMVARHDALFEIVFD--DERAVLDILNSVGHMPLPPYI--DRPDEEADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+ G+VAAPTAGLHF LL L G+++ FVTLHVGAGTF PV+VE ++H M
Sbjct: 166 QTVYSARPGAVAAPTAGLHFDEPLLQALKEKGVEMAFVTLHVGAGTFQPVRVETIEEHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
H+E + A+ + K+RG ++V+VGTTS+R LE+A ++D +I P+ T IFI
Sbjct: 226 HAEYAEVPQEVVDAVLACKARGNKVVAVGTTSVRSLESAAKASQDALIAPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY ++ +D L++NFHLP+STL+MLVSAF G + T Y A++ YRF+SYGD +
Sbjct: 286 PGYEYQVIDALITNFHLPESTLIMLVSAFAGYQHTMAAYHAAVAEQYRFFSYGDAMFI 343
>gi|59800514|ref|YP_207226.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae FA 1090]
gi|75432620|sp|Q5FAH3|QUEA_NEIG1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|59717409|gb|AAW88814.1| putative s-adenosyl methionine:tRNA ribosyltransferase-isomerase
[Neisseria gonorrhoeae FA 1090]
Length = 346
Score = 441 bits (1135), Expect = e-122, Method: Composition-based stats.
Identities = 151/360 (41%), Positives = 207/360 (57%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V + + + D + DLP ++ + D +V
Sbjct: 1 MDISDFDFTLPEHLIAQHPPEVRGSSRLLVALSD----MPLQDRVFGDLPDYVEAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 109 --EGGIRAVMVGR--EGELFCLRFEGGQTVYELLEQNGHLPLPPYI--ERAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + T A+ + K+RG + +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 223 HSEWFEVPSETVAAVEAAKARGNKAWAVGTTSMRALESAARATGYLKDGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRF VD L++NFHLPKSTLLMLV AF G+ + +Y+HAI YRF+SYGD +L +
Sbjct: 283 YRFNVVDRLVTNFHLPKSTLLMLVGAFSGMGHIRAVYRHAIEREYRFFSYGDAMVLGRNE 342
>gi|332169225|gb|AEE18480.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Krokinobacter diaphorus 4H-3-7-5]
Length = 349
Score = 441 bits (1135), Expect = e-122, Method: Composition-based stats.
Identities = 139/361 (38%), Positives = 200/361 (55%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F+FDLP +A RP RD +RLMV++ I + D+ + D +V
Sbjct: 1 MKLSHFNFDLPDELLADRPAENRDESRLMVLNRK---EQTIEHKMFKDIIDYFEPEDVMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + I L ++ + W V P++ I+ G+ L+F
Sbjct: 58 LNNTKVFPARLYGNK----EKTGARIEVFLLRELNSETRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
+ L A VID + L F G E ++++ +G PLP YI R+ ++ D
Sbjct: 114 DDE---SLVAEVIDNTTSRGRTLRFLYDGSYEEFRKKLTSLGETPLPKYINRE--VEPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YA +G+VAAPTAGLHF+ +LL RL G+ VTLHVG GTF V+VED
Sbjct: 169 EDRYQTIYATEEGAVAAPTAGLHFSKHLLKRLEIKGVDFAEVTLHVGLGTFSAVEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE +I P + +N RI +VGTTS+R++E+A + + +N + G+TN F
Sbjct: 229 KHKMDSEEAYIHKPATEIINKALKEKRRICAVGTTSMRVMESAVSSNHTLNEFGGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH PKSTLLM+VSAF G + K+ Y+ A+ Y+FYSYGD L+
Sbjct: 289 IFPPYDFSIANCMITNFHTPKSTLLMMVSAFAGHDFMKRAYEEAVKEKYKFYSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|261822535|ref|YP_003260641.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pectobacterium wasabiae WPP163]
gi|261606548|gb|ACX89034.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Pectobacterium wasabiae WPP163]
Length = 355
Score = 441 bits (1135), Expect = e-122, Method: Composition-based stats.
Identities = 137/359 (38%), Positives = 204/359 (56%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ + +DL LN D +V
Sbjct: 1 MRVADFSFELPESLIAHYPQAERSGCRLLSLDGPTGN---LTHGVFTDLLEKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKLEVLVERVLDDRRVLAHVRASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++AT+ + + + + ++ ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SVKATMAARHDA--LFELHFDDARDVLSILNAIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF +L+ L GI++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSQRPGAVAAPTAGLHFDEPMLAALREKGIEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
H+E + A+ + K+RG R+++VGTTS+R LE+A ++D I P+ T IFI
Sbjct: 226 HAEYAEVPQDVVDAVLACKARGNRVIAVGTTSVRSLESAAQASQDAPIAPFFDDTKIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY +R +D L++NFHLP+STL+MLVSAF G + T Y+ A++ YRF+SYGD +
Sbjct: 286 PGYHYRIIDALVTNFHLPESTLIMLVSAFAGYQNTMSAYREAVAEQYRFFSYGDAMFIT 344
>gi|240114895|ref|ZP_04728957.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae PID18]
gi|268600551|ref|ZP_06134718.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae PID18]
gi|268584682|gb|EEZ49358.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
gonorrhoeae PID18]
Length = 346
Score = 441 bits (1135), Expect = e-122, Method: Composition-based stats.
Identities = 152/360 (42%), Positives = 208/360 (57%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P+ + + D + DLP ++ + D +V
Sbjct: 1 MDISDFDFTLPEHLIAQHPPEVRGSSRLLVALPD----MPLQDRVFGDLPDYVEAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDNHAALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 109 --EGGIRAVMVGR--EGELFCLRFEGGQTVYELLEQNGHLPLPPYI--ERAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + T A+ + K+RG + +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 223 HSEWFEVPSETVAAVEAAKARGNKAWAVGTTSMRALESAARATGYLKDGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRF VD L++NFHLPKSTLLMLV AF G+ + +Y+HAI YRF+SYGD +L +
Sbjct: 283 YRFNVVDRLVTNFHLPKSTLLMLVGAFSGMGHIRAVYRHAIEREYRFFSYGDAMVLGRNE 342
>gi|167463103|ref|ZP_02328192.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Paenibacillus larvae subsp. larvae BRL-230010]
Length = 354
Score = 441 bits (1135), Expect = e-122, Method: Composition-based stats.
Identities = 141/363 (38%), Positives = 199/363 (54%), Gaps = 25/363 (6%)
Query: 11 PPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQ 70
P IA P+ R +RLM ++ I H DL +L + D +V N+T+VI A+
Sbjct: 1 PEELIAQTPLSDRTQSRLMTLNKETG---EIGHHTFKDLADYLKAGDLLVLNDTRVIPAR 57
Query: 71 LNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF--SQDGQSRLEA 128
L G++ ++ L + N W RP K IK G L F ++ + L A
Sbjct: 58 LFGLK----KDTGAKVELLLLKDLGDNRWEALVRPGKKIKTGAELVFGTQAEADEPVLSA 113
Query: 129 TVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQ 188
V ++ G ++ FS GI + +G +PLPPYI + D YQT +AK
Sbjct: 114 IVEEEGEMGARIVRFSYRGI-FNEILDRLGEMPLPPYIKEQ----LNDRERYQTVFAKHA 168
Query: 189 GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFID 248
GS AAPTAGLHFT L L G+++ F+TLHVG GTF PV V+ +DH +H+E +
Sbjct: 169 GSAAAPTAGLHFTEEFLEGLRGQGVRIAFITLHVGLGTFRPVSVDRVEDHNIHAEYYILS 228
Query: 249 APTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-------DGI----INPWSGFTNIFI 297
TA+ +N +++GGR+++VGTTS R LETA DG ++ SG+T+IFI
Sbjct: 229 EETARLVNETRAQGGRVIAVGTTSARTLETAAGLSHSQGYIDGEGRTLLHACSGWTSIFI 288
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY FRAVD L++NFHLPKSTLLMLVSA + Y A+ + YRF+S+GD ++
Sbjct: 289 YPGYEFRAVDGLLTNFHLPKSTLLMLVSALASRKYILHAYAEAVKNRYRFFSFGDAMFIY 348
Query: 358 QKR 360
+
Sbjct: 349 SNQ 351
>gi|147677366|ref|YP_001211581.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pelotomaculum thermopropionicum SI]
gi|189038865|sp|A5D3G5|QUEA_PELTS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|146273463|dbj|BAF59212.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase
[Pelotomaculum thermopropionicum SI]
Length = 341
Score = 441 bits (1134), Expect = e-122, Method: Composition-based stats.
Identities = 148/357 (41%), Positives = 202/357 (56%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+ LP IA P+ RD +RLMVV + L D+ +LN DA+V
Sbjct: 1 MNLSDFDYFLPDELIAQEPLPERDMSRLMVVRLD---GKEFEHRLFKDIVDYLNPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKVI A+L G + I L R+ + W RP K KG + F
Sbjct: 58 INETKVIPARLVGRK----EGTGARIELLLLRRLDSSRWEALVRPGKKAPKGTAVVF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ L ++D G ++ FS G+ E + VG +PLPPYI + D Y
Sbjct: 111 -GEGLLACRILDSTAYGGRVVEFSFEGL-FEEVLERVGVMPLPPYIKKP----LLDQQRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GS AAPTAGLHF+ LLSR+ +G+ V V LHVG GTF PV+ ED H M
Sbjct: 165 QTIYARQAGSAAAPTAGLHFSPGLLSRIREMGVAVIPVLLHVGLGTFRPVRTEDIRRHRM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E I ++A+ ++RGGR+++VGTT+ R LE+A E G + P SG+T IFI PG
Sbjct: 225 HAEYYEITEEASRAIAETRARGGRVIAVGTTTTRCLESAAEEGGRVRPGSGWTEIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YRF+ +D L++NFHLPKSTL+M+V+A G E Y+ A+ YRF+S+GD L+
Sbjct: 285 YRFKVIDGLVTNFHLPKSTLIMMVAALAGRERILAAYREAVGLRYRFFSFGDAMLII 341
>gi|91215705|ref|ZP_01252675.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Psychroflexus torquis ATCC 700755]
gi|91186171|gb|EAS72544.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Psychroflexus torquis ATCC 700755]
Length = 351
Score = 441 bits (1134), Expect = e-122, Method: Composition-based stats.
Identities = 139/361 (38%), Positives = 203/361 (56%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F++ LP + +A P RD A+LMV++ I + D+ + + D +V
Sbjct: 3 MKLSQFEYTLPENLLAQFPSEHRDEAKLMVINRKDGS---IEHKIFKDVINYFDEKDVMV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
FNNTKV A+L G + + +I L ++P + W V P++ I+ G+ L+F
Sbjct: 60 FNNTKVFPARLYGNK----EKTGAKIEVFLLRELNPETRLWDVLVDPARKIRIGNKLYFG 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
+ L A VID L F G + +++ +G PLP YI R + D
Sbjct: 116 EDE---SLVAEVIDNTTNRGRTLRFLYDGSYQDFRAKLTELGQTPLPKYITRD--VVPED 170
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ +LL RL GI VTLH+G GTF PV+VED
Sbjct: 171 AERYQTIYAKEEGAVAAPTAGLHFSKHLLKRLEIKGIDFAEVTLHIGLGTFSPVEVEDLS 230
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE +D +N+ KS +I +VGTT +R +E+ + + +N ++G+TN F
Sbjct: 231 KHKMDSEQIKVDEKATSIINNAKSEKRKICAVGTTVMRTIESTVSSNRRLNEFTGWTNKF 290
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F+ + +++NFH+PKSTLLM+VSAF G E +K Y+ AI Y+FYSYGD L+
Sbjct: 291 IFPPYDFKIANCMITNFHMPKSTLLMMVSAFAGHELMEKAYKEAIEENYKFYSYGDAMLI 350
Query: 357 F 357
Sbjct: 351 I 351
>gi|288958938|ref|YP_003449279.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Azospirillum sp. B510]
gi|288911246|dbj|BAI72735.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Azospirillum sp. B510]
Length = 342
Score = 441 bits (1134), Expect = e-121, Method: Composition-based stats.
Identities = 181/358 (50%), Positives = 232/358 (64%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDFDLPP RIA PV PRD+ARL+ V + D +V DLPA L D +V
Sbjct: 1 MKTADFDFDLPPDRIAEHPVRPRDAARLLEV------GSSLRDLIVRDLPALLQPGDLMV 54
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L+G R E + TLH R+ W+ +++P K +K GD + ++
Sbjct: 55 VNDTRVIPARLDGRR------GEVAVEITLHKRLGERDWATFSKPGKRLKPGDTIVI-AE 107
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D + + A + E+ L FS G +L + G +PLPPYI RK DA D DY
Sbjct: 108 DFSAEVTAK-----DGMEVRLRFSAGGADLMEALHRHGRMPLPPYIRRK--ADAGDNADY 160
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A +G+VAAPTAGLHFT++LL+ L + G++ VTLHVGAGTF+PVKV+D DH M
Sbjct: 161 QTVFAAREGAVAAPTAGLHFTADLLAALDARGVRRVPVTLHVGAGTFLPVKVDDIADHKM 220
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE G I TA A+N + GGRIVSVGTT+LR+LETA DG + P+SG T+IFITPG
Sbjct: 221 HSEWGEISPETAAAVNETRKAGGRIVSVGTTALRILETAGRPDGTLVPFSGDTDIFITPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRFR VD+L +NFHLPKSTL MLV AF G + + Y HAI H YRF+SYGD SLL +
Sbjct: 281 YRFRIVDLLWTNFHLPKSTLFMLVCAFAGYDRMRAAYAHAIDHDYRFFSYGDASLLHR 338
>gi|307249979|ref|ZP_07531951.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 4 str. M62]
gi|306858039|gb|EFM90123.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus pleuropneumoniae serovar 4 str. M62]
Length = 361
Score = 441 bits (1134), Expect = e-121, Method: Composition-based stats.
Identities = 134/364 (36%), Positives = 198/364 (54%), Gaps = 18/364 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +F FDLP IA P R ++RL+ ++ D DL +N D ++
Sbjct: 1 MLVSDFHFDLPDELIARYPTEERTASRLLHLNGETG---HFEDKQFFDLLDQINEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARLYGRKAS-----GGKLEVLVERVLDEHRCLAHVRASKAPKEGAELVLGED 112
Query: 121 DGQSR--LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+A + + + + + + + G +PLPPYI RP + D
Sbjct: 113 KLGEGNGFKAIMTARHDA--LFELHFNEERPVFDLLQQAGHMPLPPYI--DRPDEDADQE 168
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y+K+ G+VAAPTAGLHF + L +L + G+ + FVTLHVGAGTF PV+V++ DH
Sbjct: 169 RYQTVYSKVLGAVAAPTAGLHFDNPTLEKLKAKGVNIAFVTLHVGAGTFQPVRVDNILDH 228
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTN 294
MH+E + + + K+ G R+++VGTTS+R +E+A E +I P+ T+
Sbjct: 229 KMHAEYAEVSQAVVDQILATKATGKRVIAVGTTSVRSIESAAQAAEKEGKLIAPFFSDTS 288
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IF+ PG FR VD L++NFHLP+STL+MLVSAF G T K YQHA+ YRF+SYGD
Sbjct: 289 IFLYPGKTFRIVDALVTNFHLPESTLIMLVSAFAGYRNTMKAYQHAVEAKYRFFSYGDAM 348
Query: 355 LLFQ 358
+ +
Sbjct: 349 FINK 352
>gi|310829217|ref|YP_003961574.1| hypothetical protein ELI_3655 [Eubacterium limosum KIST612]
gi|308740951|gb|ADO38611.1| hypothetical protein ELI_3655 [Eubacterium limosum KIST612]
Length = 344
Score = 440 bits (1133), Expect = e-121, Method: Composition-based stats.
Identities = 145/358 (40%), Positives = 200/358 (55%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ K+F +DLP IA P RD++RLMV++ I D D+ +LN +D +V
Sbjct: 4 LTTKDFYYDLPEELIAQTPEKKRDASRLMVLNRMEGS---IQDRYFHDIIDYLNEDDLLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKV+ A++ G + ++ L R+ +W +P K G L F
Sbjct: 61 MNNTKVLPARIFGKK----EETGGKVELLLLKRLDDKTWETMVKPGKKAMPGTRLVFGD- 115
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+L+ + DK +G ++ F GI E I +GT+PLPPYI D Y
Sbjct: 116 ----KLKGEIKDKIESGLRIIEFEYDGI-FEEIIGELGTMPLPPYIHEV----LEDQDRY 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL L GI+ VTLHVG GTF PVK ++ DH M
Sbjct: 167 QTVYAKYTGSAAAPTAGLHFTEELLDALRRKGIRTAEVTLHVGIGTFRPVKCDNILDHHM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
H E + T + + + +GGR+++VGTTS+R LE+A G + G T+IFI P
Sbjct: 227 HEETYQVPKETEKLIEETRKKGGRVIAVGTTSVRTLESAAARFGGKVQACEGSTDIFIYP 286
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY+++ +D L++NFHLP+STLLMLVS+F E K YQHAI YRF+S+GD ++
Sbjct: 287 GYKWQVIDALITNFHLPESTLLMLVSSFYNREAVLKAYQHAIDARYRFFSFGDAMFIY 344
>gi|325281821|ref|YP_004254363.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Odoribacter
splanchnicus DSM 20712]
gi|324313630|gb|ADY34183.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Odoribacter
splanchnicus DSM 20712]
Length = 349
Score = 440 bits (1133), Expect = e-121, Method: Composition-based stats.
Identities = 136/361 (37%), Positives = 188/361 (52%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F + LPP IA P RD RLMVV I + D+ + + D V
Sbjct: 1 MKLSKFRYKLPPELIAQHPSANRDECRLMVVDRKTGT---IEHKVFKDVIDYFDEKDVFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + EI L ++ + W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK----EKTGAEIEVFLLRELNRDLRIWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDARD 176
D L A VID + L F G E ++ + +G PLP I RK ++ D
Sbjct: 114 EDD---SLVAEVIDNTTSRGRTLRFLFDGEYDEFKKLLYGLGETPLPRTITRK--VEPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT +A+ +G+VAAPTAGLHF+ L+ R+ GI ++TLHVG G F V VED
Sbjct: 169 EERYQTIFARYEGAVAAPTAGLHFSRELMKRMEIKGIDFAYITLHVGLGNFREVDVEDLT 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE + T + +N K +I +VGTT +R LE+ T G + + G+TN F
Sbjct: 229 KHKMDSEQIIVGGDTVKIVNDAKDERHKICAVGTTVVRTLESCVTTKGRLTEYDGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F D +SNFHLP STLLM+V+AF G + K Y A+ YRF +YGD L+
Sbjct: 289 IFPPYDFSVPDAFISNFHLPYSTLLMMVAAFGGYDLVMKAYDLAVKEKYRFGTYGDAMLI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|90021052|ref|YP_526879.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Saccharophagus degradans 2-40]
gi|122996339|sp|Q21KW2|QUEA_SACD2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|89950652|gb|ABD80667.1| S-adenosylmethionine [Saccharophagus degradans 2-40]
Length = 350
Score = 440 bits (1133), Expect = e-121, Method: Composition-based stats.
Identities = 136/357 (38%), Positives = 202/357 (56%), Gaps = 18/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F ++LP IA RP R +RL+++ ++ DL + D +V
Sbjct: 1 MRRQDFSYELPDELIARRPTETRTGSRLLMLDGPSG---ELAHKQFPDLLNLVEEGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + ++ + +S + R SK K G I+
Sbjct: 58 FNNTRVIPARVFGQKAS-----GGKLEILAERILDAHSILAHVRSSKAPKPGSIIIL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
Q E ++ + L F L+ + +G +PLPPYI R +A D Y
Sbjct: 110 --QDGTEVEMVARHEA-LFELRFPADTTALD-VLENIGHMPLPPYI--DREDEADDKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y +G+VAAPTAGLHF LL++L G++ FVTLHVGAGTF PV+V++ +H M
Sbjct: 164 QTVYGTQKGAVAAPTAGLHFDDVLLAKLKDKGVQQAFVTLHVGAGTFQPVRVDNIFEHHM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE+ + + + K+ G R+++VGTTS+R LETA ++G++ P+ G T+IFI PG
Sbjct: 224 HSEVMHVSQEVCDLIKATKAAGKRVIAVGTTSVRCLETAA-QNGVVEPYQGDTDIFIYPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+++ VD L++NFHLP+STLLMLVSAF G + T YQ A++ YRF+SYGD +
Sbjct: 283 YQYKVVDALVTNFHLPESTLLMLVSAFAGYKHTMNAYQQAVAQCYRFFSYGDAMFIT 339
>gi|322834079|ref|YP_004214106.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Rahnella
sp. Y9602]
gi|321169280|gb|ADW74979.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Rahnella
sp. Y9602]
Length = 356
Score = 440 bits (1132), Expect = e-121, Method: Composition-based stats.
Identities = 133/360 (36%), Positives = 206/360 (57%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+L S IA P R RL+ + ++ + +D+ ++ D +V
Sbjct: 1 MRVADFSFELSESLIARYPQTQRSGCRLLSLDGPSG---ELTHGVFTDILDKIHPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + R SK K G L +
Sbjct: 58 FNNTRVIPARVFGRKVS-----GGKIEVLVERVLDTHRVLAHVRASKSPKPGAELLLGDK 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++AT++ + +T + + ++ ++ +G +PLPPYI RP + D Y
Sbjct: 113 ED---IKATMVARHDT--LFELEFNEDRDVFTLLNEIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF L+ L + G++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSERPGAVAAPTAGLHFDEPLMDALKAKGVEFAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
H+E + A+ + K+RG +V+VGTTS+R LE+A +ED +I P+ G T IFI
Sbjct: 226 HAEYAEVPQDVVDAVLACKARGNNVVAVGTTSVRSLESAAKASEDALIAPFFGDTKIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ +D L++NFHLP+STL+MLVSAF G + T Y A++ Y F+SYGD + +
Sbjct: 286 PGYHYQVIDSLITNFHLPESTLIMLVSAFAGYKNTMNAYHQAVAEQYHFFSYGDAMFINR 345
>gi|83954337|ref|ZP_00963057.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sulfitobacter sp. NAS-14.1]
gi|83841374|gb|EAP80544.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sulfitobacter sp. NAS-14.1]
Length = 354
Score = 440 bits (1132), Expect = e-121, Method: Composition-based stats.
Identities = 165/361 (45%), Positives = 224/361 (62%), Gaps = 14/361 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF+LP IA RP PR SA+++V + ++D V+++ +L D +V
Sbjct: 1 MKLSDFDFELPERLIATRPAVPRTSAKMLVAQGD-----HMTDTTVANMSDWLRPGDRLV 55
Query: 61 FNNTKVITAQLNGVRF--CHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L+G+R + I TL W+ +P K +K + + F
Sbjct: 56 LNDTRVIPARLSGLRHRNSVQGPVQARIEVTLLEPRGDADWTALIKPLKKLKIDETVVF- 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
S D +RL G+ L F+ SG + + ++ G +PLPPYIA KRP DA+D
Sbjct: 115 SADLSARLVGV-----EDGQGRLRFNCSGDDFDAALNDAGAMPLPPYIAGKRPADAQDMT 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +AK G+VAAPTA LHF LL +L +G++ VTLHVGAGTF+PVKV+D DH
Sbjct: 170 DYQTVFAKNAGAVAAPTASLHFDQLLLDQLAEMGVRFSHVTLHVGAGTFLPVKVDDIADH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE G + A A +++ K+ GGR++ VGTT+LRL+ETA G I PW G T+IFIT
Sbjct: 230 KMHSEWGQVSAQAAAEISATKAAGGRVIPVGTTALRLVETAARS-GNIQPWEGDTDIFIT 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ F D LM+NFHLPKSTL+MLVSA G + +K+Y HAI YRF+SYGD SLLF
Sbjct: 289 PGFEFNVADALMTNFHLPKSTLMMLVSALMGQKTIQKIYNHAIESNYRFFSYGDASLLFP 348
Query: 359 K 359
K
Sbjct: 349 K 349
>gi|157369303|ref|YP_001477292.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Serratia
proteamaculans 568]
gi|167016408|sp|A8GAM4|QUEA_SERP5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|157321067|gb|ABV40164.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Serratia
proteamaculans 568]
Length = 356
Score = 440 bits (1132), Expect = e-121, Method: Composition-based stats.
Identities = 139/360 (38%), Positives = 208/360 (57%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + + + +DL L + D +V
Sbjct: 1 MRVADFSFELPESLIAHYPQPERSGCRLLQLDGPSG---ELKHGVFTDLLDNLEAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + R SK K G L
Sbjct: 58 FNNTRVIPARMFGRKVS-----GGKIEVLVERVLDDHRVLAHVRASKAPKPGTDLLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT++ + +T + + ++ ++ VG +PLPPYI RP + D Y
Sbjct: 113 E---SIAATMVARHDT--LFELRFNDERDVFTILNAVGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L GI++ FVTLHVGAGTF PV+VE ++H+M
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLAALREKGIEMAFVTLHVGAGTFQPVRVETIEEHVM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
H+E + A+ + K+RG R+V+VGTTS+R LE+A +++ +I P+ T+IFI
Sbjct: 226 HAEYAEVPQEVVDAVLACKARGKRVVAVGTTSVRSLESAANASKEALIAPFFDDTSIFIF 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ VD L++NFHLP+STL+MLVSAF G + T YQ A++ YRF+SYGD + +
Sbjct: 286 PGYHYQVVDALVTNFHLPESTLIMLVSAFAGYKNTMHAYQQAVAEQYRFFSYGDAMFISR 345
>gi|218438447|ref|YP_002376776.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cyanothece
sp. PCC 7424]
gi|218171175|gb|ACK69908.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Cyanothece
sp. PCC 7424]
Length = 366
Score = 440 bits (1132), Expect = e-121, Method: Composition-based stats.
Identities = 152/369 (41%), Positives = 208/369 (56%), Gaps = 25/369 (6%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D+ LP IA PV PRDS+RL++V S + DL +L D +VF
Sbjct: 6 LLSSYDYQLPSELIAQTPVVPRDSSRLLIVDSLT----TYSHSVFRDLGKWLLPGDLLVF 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS-- 119
NNT+VI A+L G + + L S W +P K K G + F+S
Sbjct: 62 NNTRVIPARLYGRKVTGSP-----VEILLLEEKSNLCWLALVKPGKRFKIGSEIEFYSSI 116
Query: 120 ---QDGQSRLEATVIDKWNT-GEILLVFSI-SGIELERQISLVGTIPLPPYIARKRPIDA 174
++ + L+A V+++ T G LL F + S + +G IP PPYI+ +
Sbjct: 117 AQGENQEVVLKAKVLERDETTGGRLLQFELKSDRSFWELLEQIGEIPFPPYISSSDAKAS 176
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
+ YQT YA+ G+VAAPTAGLHFT+ LL L+S GI VTLHVG GTF PV+VED
Sbjct: 177 Q----YQTVYAQKSGAVAAPTAGLHFTNELLESLLSQGIDQAHVTLHVGVGTFRPVEVED 232
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE----DGI-INPW 289
H+MH+E + T Q + + K+RGGR+++VGTT +R LE A E DG + P+
Sbjct: 233 ITQHLMHTEWVEVPEATVQKIEATKARGGRVIAVGTTVVRSLEGAAKETQPPDGKYLLPF 292
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
G T++FI PGY + VD L++NFHLPKS+LLMLVSA G E +YQ AI YRFYS
Sbjct: 293 RGKTDLFIYPGYSWGVVDGLITNFHLPKSSLLMLVSALIGRERLLSLYQVAIEERYRFYS 352
Query: 350 YGDTSLLFQ 358
+GD L+
Sbjct: 353 FGDAMLILP 361
>gi|85711767|ref|ZP_01042823.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase [Idiomarina
baltica OS145]
gi|85694382|gb|EAQ32324.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase [Idiomarina
baltica OS145]
Length = 349
Score = 440 bits (1132), Expect = e-121, Method: Composition-based stats.
Identities = 132/359 (36%), Positives = 201/359 (55%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ V +F FDLP IA P R ++R++ V L+ I +D+ L + D +V
Sbjct: 8 LKVSDFSFDLPDELIARYPQQQRTASRMLRV---LAQQNRIEHGQFTDIVDQLEAGDLLV 64
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + ++ + + + + R ++ K G
Sbjct: 65 FNDTRVIPARLLGEKTS-----GGKVEVLVERMLDDSRVLAHVRANRAPKPGAEFLL--- 116
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++AT++ + + + + + + G +PLPPYI RP + D Y
Sbjct: 117 --EGAVKATMLARHDA--LFELEFNHQETVLELLEAHGHMPLPPYI--DRPDEESDKERY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF +L +L G++ +VTLHVGAGTF PV+V+ ++H+M
Sbjct: 171 QTVYNREPGAVAAPTAGLHFDDAILQQLKDKGVEFGYVTLHVGAGTFQPVRVDSIEEHVM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFITP 299
HSE +D + + VK G R+++VGTTS+R LE+A D +I P+ T+IFI P
Sbjct: 231 HSEYAKVDTKVCEQIKKVKQAGKRVIAVGTTSVRSLESAAQATDELIAPFFDDTDIFIYP 290
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
GY F+ +D L++NFHLP+STL+MLVSAF G E YQ AI YRF+SYGD+ L+ +
Sbjct: 291 GYEFKVIDGLVTNFHLPESTLIMLVSAFAGKELIMNAYQQAIDEKYRFFSYGDSMLILR 349
>gi|222099065|ref|YP_002533633.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Thermotoga
neapolitana DSM 4359]
gi|221571455|gb|ACM22267.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Thermotoga
neapolitana DSM 4359]
Length = 337
Score = 440 bits (1132), Expect = e-121, Method: Composition-based stats.
Identities = 139/357 (38%), Positives = 197/357 (55%), Gaps = 22/357 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V EFD++LPP IA PV PRD++RLMV+H I + ++ +L D +V
Sbjct: 3 MKVSEFDYELPPELIAQEPVEPRDASRLMVLHRKTKK---IEHRIFREIVEYLEPGDLLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N +KVI A+L + + I L R+ W +P + +KKG L
Sbjct: 60 LNVSKVIPARLYAKK-----KTGAHIEILLLDRLEEGIWRCLVKPGQKVKKGTELLI--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ L A +D+ G +L F +L I G PLPPYI ++ P+D Y
Sbjct: 112 --DNNLSAVCLDRSEDGTRILEFRPKNDDL---ILKKGKAPLPPYIKKEVPLD-----RY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GSVAAPTAGLHFT L+ +L G++ + LHVG GTF PVKVE+ + H M
Sbjct: 162 QTVYAKENGSVAAPTAGLHFTPELIEKLKEKGVEFAEIVLHVGIGTFRPVKVEEVEKHRM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + + + K +G R+V+VGTT++R LET ++G T++FI P
Sbjct: 222 HEEYYRVPREAVRKIRETKEKGKRVVAVGTTTVRTLETIARLPEQ-EEYAGKTDLFIYPP 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+ VD L++NFHLP+STLLMLV+AF G + + Y+ A+ YRF+S+GD L+
Sbjct: 281 FEFKMVDALITNFHLPRSTLLMLVAAFAGKDFIMEAYREAVKRRYRFFSFGDAMLIL 337
>gi|313677065|ref|YP_004055061.1| s-adenosylmethionine--tRNA ribosyltransferase-isomerase [Marivirga
tractuosa DSM 4126]
gi|312943763|gb|ADR22953.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Marivirga
tractuosa DSM 4126]
Length = 348
Score = 440 bits (1131), Expect = e-121, Method: Composition-based stats.
Identities = 134/361 (37%), Positives = 197/361 (54%), Gaps = 17/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EF F+LP +A P RD A+LMV+H + I D+ + + D +V
Sbjct: 1 MKLSEFKFELPLKLVAQHPAEDRDLAKLMVLHKDTG---EIEHKTFKDIVDYFDEGDILV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + +I L ++ + W V P++ I+ G+ L+F
Sbjct: 58 TNNTKVFPARLYGNK----EKTGAQIEVFLLRELNKEMHLWDVLVDPARKIRVGNKLYF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIE--LERQISLVGTIPLPPYIARKRPIDARD 176
G L A VID + + F G + + + +G PLP YI KRP++ D
Sbjct: 113 ---GDGELVAEVIDNTTSRGRTIKFLYDGDDQDFYKLVDSLGETPLPKYI--KRPVEEAD 167
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+QT YA+ G+VAAPTAG+HFT +L R+ GIK +TLH+G GTF PV VED
Sbjct: 168 RERFQTIYAEEVGAVAAPTAGMHFTRQVLKRMELKGIKTSPITLHIGLGTFRPVDVEDLT 227
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE + TA+ +N + R+ +VGTT++R +E++ T + + G+T+ F
Sbjct: 228 KHKMDSENFKVPVKTAELVNESLNSKKRVCAVGTTAMRSMESSVTANNRLKENEGWTDRF 287
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F+ + L++NFH+P+STLLM+ +AF G + YQ AI H YRF SYGD L+
Sbjct: 288 IFPPYEFKICNALLTNFHMPESTLLMMAAAFGGYDNVMNAYQEAIKHKYRFLSYGDAMLI 347
Query: 357 F 357
Sbjct: 348 I 348
>gi|300310560|ref|YP_003774652.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase)protein [Herbaspirillum seropedicae SmR1]
gi|300073345|gb|ADJ62744.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase)protein [Herbaspirillum seropedicae SmR1]
Length = 338
Score = 440 bits (1131), Expect = e-121, Method: Composition-based stats.
Identities = 148/356 (41%), Positives = 203/356 (57%), Gaps = 22/356 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LPP IA P+ R ++RL+ V ++D SD+ L + D +VFN
Sbjct: 4 LSDFDFELPPELIAQTPLAERSASRLLQVQG-----AQLTDRRFSDIVDLLQAGDLLVFN 58
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+VI A+L GV+ +I + + P + R SK G +
Sbjct: 59 DTRVIKARLFGVKE-----TGGKIEALVERILDPRTVHAQVRASKSPPPGTRIRLADA-- 111
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
E TV +++ L + + G++PLPPYI + DA D YQT
Sbjct: 112 ---FEVTVGERFGEFYTLHFPE----DAFALLEQYGSLPLPPYIDHE--ADAYDETRYQT 162
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YAK G+VAAPTAGLHF LL +L + G++ FVTLHVGAGTF PV+VED H MHS
Sbjct: 163 VYAKEPGAVAAPTAGLHFDQALLEQLAARGVQQAFVTLHVGAGTFQPVRVEDLSQHKMHS 222
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I T +A+ + K+ G R+++VGTTS+R LE+ ++ G + S T +FITPGY
Sbjct: 223 EWYTIPPETVEAVRAAKAAGRRVIAVGTTSMRALES-GSQSGALKAGSDDTQLFITPGYT 281
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F+ VD L++NFHLPKSTLLMLVSAF G E + Y HAI+ YRF+SYGD LL +
Sbjct: 282 FKTVDQLVTNFHLPKSTLLMLVSAFAGYELIRAAYAHAIAQKYRFFSYGDAMLLTR 337
>gi|83943202|ref|ZP_00955662.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sulfitobacter sp. EE-36]
gi|83846210|gb|EAP84087.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sulfitobacter sp. EE-36]
Length = 354
Score = 440 bits (1131), Expect = e-121, Method: Composition-based stats.
Identities = 166/361 (45%), Positives = 223/361 (61%), Gaps = 14/361 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF+LP IA RP PR SA+++V + ++D V+++ +L D +V
Sbjct: 1 MKLSDFDFELPERLIATRPAVPRTSAKMLVAQGD-----HMTDTTVANMSDWLRPGDRLV 55
Query: 61 FNNTKVITAQLNG--VRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L+G R + I TL W+ +P K +K + + F
Sbjct: 56 LNDTRVIPARLSGLRHRESAQGPVQARIEVTLLEPRGDADWTALIKPLKKLKIDETVVF- 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
S D +RL G+ L F+ SG + + ++ G +PLPPYIA KRP DA+D
Sbjct: 115 SADLSARLVGV-----EDGQGRLRFNCSGDDFDAALNDAGAMPLPPYIAGKRPADAQDMT 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +AK G+VAAPTA LHF LL +L +IG+ VTLHVGAGTF+PVKV+D DH
Sbjct: 170 DYQTVFAKNAGAVAAPTASLHFDQPLLDQLAAIGVCFSHVTLHVGAGTFLPVKVDDIADH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE G + A A +++ K+ GGR++ VGTT+LRL+ETA G I PW G T+IFIT
Sbjct: 230 KMHSEWGQVSAQAAAEISATKAAGGRVIPVGTTALRLVETAARS-GNIQPWEGDTDIFIT 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ F D LM+NFHLPKSTL+MLVSA G + +K+Y HAI YRF+SYGD SLLF
Sbjct: 289 PGFEFNVADALMTNFHLPKSTLMMLVSALMGQKTIQKIYNHAIESNYRFFSYGDASLLFP 348
Query: 359 K 359
K
Sbjct: 349 K 349
>gi|305664560|ref|YP_003860847.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Maribacter
sp. HTCC2170]
gi|88708577|gb|EAR00813.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Maribacter
sp. HTCC2170]
Length = 349
Score = 440 bits (1131), Expect = e-121, Method: Composition-based stats.
Identities = 142/361 (39%), Positives = 204/361 (56%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F+F+LP +A P RD ++LMV+H I + DL + + D +V
Sbjct: 1 MKLSHFNFELPNDLLAEYPAENRDESKLMVIHRETGK---IEHKMFKDLINYFDEGDVMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 LNNTKVFPARLYGNK----EKTGARIEVFLLRELNEEQRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
+ L A VID + L F G + R++ +G PLP YI KR ++ D
Sbjct: 114 EDE---SLVAEVIDNTTSRGRTLRFLYDGSYTDFRRKLRELGQTPLPKYI--KRDVEEED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ +LL RL G+ +TLHVG GTF PV+VED
Sbjct: 169 ETRYQTIYAKHEGAVAAPTAGLHFSKHLLKRLEIKGVDFAELTLHVGLGTFNPVEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE ID + +N+ KS ++ +VGTT++R LE+A + + +N ++G+TN F
Sbjct: 229 KHKMDSEELIIDEKATEIVNNAKSNKRKVCAVGTTAMRGLESAVSSEHTLNTFNGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ P Y F + +++NFHLPKSTLLM+VSAF G + KK Y+ AI +Y+FYSYGD L+
Sbjct: 289 VFPPYEFSIANCMVTNFHLPKSTLLMMVSAFIGHDLMKKAYKEAILESYKFYSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|313201955|ref|YP_004040613.1| s-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylovorus sp. MP688]
gi|312441271|gb|ADQ85377.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylovorus sp. MP688]
Length = 351
Score = 440 bits (1131), Expect = e-121, Method: Composition-based stats.
Identities = 150/360 (41%), Positives = 211/360 (58%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++FDF LP IA P RD +RL+ + N I+DH +LP FLN+ D ++
Sbjct: 1 MRTEDFDFFLPEELIAQFPAAERDGSRLLRLDGNSGA---IADHQFRELPQFLNAGDVLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + I + + + + R S+ K G +
Sbjct: 58 FNDTRVIKARLQGHKESGGS-----IELLIERPLDTHRALAHIRASRSPKPGSRIFIGDG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A VI++ + + L+ L + G +PLPPYI DA D Y
Sbjct: 113 -----IPARVIERQDD--LFLIEVEHTTPLLDLLDQYGALPLPPYITH--AADAEDDERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF +L RL + GI++ +VTLHVGAGTF PV+V+D +H M
Sbjct: 164 QTVYARTPGAVAAPTAGLHFNQAMLDRLQTAGIQIAYVTLHVGAGTFQPVRVDDISEHRM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSEI + T +N+ ++ G +I +VGTT+LR LE+A G + SG T+IFITPG
Sbjct: 224 HSEIYTVPPATVDLINTARAAGHKITAVGTTALRALESAARS-GALVAGSGETDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRF+ V+ L++NFHLPKSTL+MLVSAF G+E + Y HAI+ YRF+SYGD LL ++
Sbjct: 283 YRFQVVERLLTNFHLPKSTLMMLVSAFAGVENIRAAYAHAIASRYRFFSYGDAMLLERRE 342
>gi|326801376|ref|YP_004319195.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sphingobacterium sp. 21]
gi|326552140|gb|ADZ80525.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sphingobacterium sp. 21]
Length = 349
Score = 440 bits (1131), Expect = e-121, Method: Composition-based stats.
Identities = 134/361 (37%), Positives = 191/361 (52%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP S IA P RD ARLMV+ I + D+ + +D ++
Sbjct: 1 MKLSQFKFNLPDSLIAHEPAETRDEARLMVLDRKTGA---IEHKIFKDVLNYFEEHDVMI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 LNNTKVFPARLYGNK----EKTGATIEVFLLRELNKELRLWDVLVDPARKIRVGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D L A V+D + + F G E R I ++G PLP YI RK D
Sbjct: 114 DND---LLVAEVVDNTTSRGRTIRFLFDGSDEEFRRNIEILGETPLPKYIKRK--PTPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT +AK +G+VAAPTAGLHF+ L+ RL G++ VTLHVG GTF V+VED
Sbjct: 169 KFRYQTIFAKNEGAVAAPTAGLHFSRELMKRLELKGVEFAEVTLHVGLGTFRQVEVEDLT 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I+ A +N + R+ +VGTTS+R +E+A + + + + +T+ F
Sbjct: 229 KHKMDSEQFIIEQKDADIVNKAIAEKRRVCAVGTTSMRSIESAVSANRTLKAANDWTSKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH P+STLLM++ AF G E Y+ A+ YRFYSYGD L+
Sbjct: 289 IFPPYDFSIANSMITNFHTPESTLLMMICAFGGYEHVMNAYEIAVKEKYRFYSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|170077817|ref|YP_001734455.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus sp. PCC 7002]
gi|169885486|gb|ACA99199.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus sp. PCC 7002]
Length = 358
Score = 440 bits (1131), Expect = e-121, Method: Composition-based stats.
Identities = 147/361 (40%), Positives = 199/361 (55%), Gaps = 17/361 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +D+DLPP RIA PV PRD +RL+V+ I L +L ND +V N
Sbjct: 7 LSSYDYDLPPERIAQTPVTPRDRSRLLVLD----SVDSIQHQHFYHLVDWLQPNDLLVMN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS-QD 121
NTKVI A+L+G + + L S ++W +P K G + F + D
Sbjct: 63 NTKVIPARLHGRKT-----TGAPVEVLLLEERSADTWLALVKPGKRFTLGSEILFTAPHD 117
Query: 122 GQSRLEATVIDKW-NTGEILLVFSI-SGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
L+ATV+D+ TG LL F + L + G IP PPY+ +
Sbjct: 118 LSQTLKATVVDRDPETGGRLLEFQLRPNQTLWSVLDDFGEIPFPPYVTDSEAKPDQ---- 173
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ G+VAAPTAGLHFT + L G++ FVTLHVG GTF PV+VED H
Sbjct: 174 YQTIYAETPGAVAAPTAGLHFTPEVFEALEQKGVEKTFVTLHVGVGTFRPVEVEDITAHD 233
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE-TATTEDGIINPWSGFTNIFIT 298
MH E + T + + K++GGR+++VGTT +R LE A G + + G TN+FI
Sbjct: 234 MHYEWIDVPEETVKKIRETKAKGGRVIAVGTTVVRSLEGMAAASPGELQSFQGQTNLFIY 293
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ VD L++NFHLPKS+LLMLVSA G E +YQ AI+ YRFYS+GD L+
Sbjct: 294 PGYEWQVVDGLITNFHLPKSSLLMLVSALIGRERLLDVYQAAIAQEYRFYSFGDAMLILP 353
Query: 359 K 359
+
Sbjct: 354 E 354
>gi|300776948|ref|ZP_07086806.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Chryseobacterium gleum ATCC 35910]
gi|300502458|gb|EFK33598.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Chryseobacterium gleum ATCC 35910]
Length = 349
Score = 440 bits (1131), Expect = e-121, Method: Composition-based stats.
Identities = 137/361 (37%), Positives = 196/361 (54%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F+FDLP +A P RD ARLMV+ I L D+ + + D +
Sbjct: 1 MKTSDFNFDLPAELLAEHPSEHRDEARLMVLDRKTQT---IEHKLFKDVVDYFDEEDLFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
FNNTKV A+L G + + +I L + + W V P++ I+ G+ L F
Sbjct: 58 FNNTKVFPARLYGNK----EKTGAKIEVFLLRELDKETRVWDVLVDPARKIRIGNKLFFT 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
+ L A VID + L F G E ++ +G PLP YI KR ++ D
Sbjct: 114 EDE---SLVAEVIDNTTSRGRTLRFLFDGSYEEFRSKLKELGETPLPKYI--KRAVEPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK++G+VAAPTAGLHF+ +L+ RL GI VTLHVG GTF P++VED
Sbjct: 169 AERYQTIYAKVEGAVAAPTAGLHFSKHLMKRLEIKGINFAEVTLHVGLGTFNPIEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE ID A +N R+ +VGTT++R LET+ + + I+ ++G+TN F
Sbjct: 229 KHKMESEEIIIDEKNAAIINKAVEAHRRVCAVGTTTMRALETSVSSNKKISAFNGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P + F + +++NFH PKSTL+M+++AF G + Y+ A+ Y+FYSYGD L+
Sbjct: 289 IYPPHEFGVANSMITNFHTPKSTLIMMIAAFAGRDFVMHAYEEAVKEKYKFYSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 L 349
>gi|284006391|emb|CBA71627.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Arsenophonus nasoniae]
Length = 352
Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats.
Identities = 139/359 (38%), Positives = 206/359 (57%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F LP IA P+ R RL+ + + ++ + +D+ L S D +V
Sbjct: 1 MRVSDFAFKLPDELIAHYPLAKRSHCRLLSLDGSTG---ELAHGIFTDIVDKLESGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + P+ + R SK K G L
Sbjct: 58 FNNTQVIPARLYGRKIS-----GGKIEVLIERMLDPHRVLAHVRASKAPKVGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++A ++ + +T + + ++ ++ +G IPLPPYIA RP + D Y
Sbjct: 113 E---SVKAIMLARHDT--LFEIGFQDKRDVLAILNDIGHIPLPPYIA--RPDEEIDRTLY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF +LL+ L G+ + FVTLHVGAGTF PV+VE+ +H M
Sbjct: 166 QTVYGQRPGAVAAPTAGLHFDQSLLAALRQKGVAMAFVTLHVGAGTFQPVRVENVAEHTM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
H+E + A+ + K+RG R+++VGTTS+R LE+A ++ II P+ T IFI
Sbjct: 226 HAEYVEVSQEVVDAILACKARGKRVIAVGTTSIRSLESAACACKEAIIAPFFDDTRIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG+ F+ VD L++NFHLP+STL+MLVSAF G + T Y+ AI+ YRF+SYGD +
Sbjct: 286 PGFHFQIVDALITNFHLPESTLIMLVSAFAGYQNTMNAYKKAIAEKYRFFSYGDAMFIT 344
>gi|332141988|ref|YP_004427726.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Alteromonas
macleodii str. 'Deep ecotype']
gi|238693253|sp|B4RVF4|QUEA_ALTMD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|327552010|gb|AEA98728.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Alteromonas
macleodii str. 'Deep ecotype']
Length = 348
Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats.
Identities = 130/364 (35%), Positives = 199/364 (54%), Gaps = 23/364 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP + IA P R ++RL+ + + + +D+ F+ D +V
Sbjct: 1 MKLSDFSFVLPENLIAKYPTQQRTASRLLHLDGKNGK---VEHTMFADMLKFVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + S + + R SK K G L
Sbjct: 58 FNNTRVIPARLLGKKE-----TGGQVEVLIERITSDTTALAHVRASKAPKPGTKLIL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++ TV + + + ++ + + G +PLPPYI RP + D Y
Sbjct: 110 --EEKVNVTVTGRDDA--LFILQFDHDETVLTLLEAHGHMPLPPYI--DRPDENSDKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF ++L+ L G+ + FVTLHVGAGTF PV+V++ +H M
Sbjct: 164 QTVYNEKPGAVAAPTAGLHFDDSILNALKEKGVNLAFVTLHVGAGTFQPVRVDNIQEHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT------TEDGIINPWSGFTN 294
H+E + A+ + K+ G R+++VGTTS+R LE+A ++ II P++ T
Sbjct: 224 HAEFAEVPQDVVDAVLNTKANGKRVIAVGTTSVRSLESAAKASAERGDEQIIAPFNEDTE 283
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PG+ F+ VD + +NFHLP+STL+ML+SAF G E YQ AI+ YRF+SYGD
Sbjct: 284 IFIYPGFEFKVVDAMFTNFHLPESTLMMLISAFAGKENVMNAYQEAIAKEYRFFSYGDAM 343
Query: 355 LLFQ 358
+ +
Sbjct: 344 FIER 347
>gi|291616515|ref|YP_003519257.1| QueA [Pantoea ananatis LMG 20103]
gi|291151545|gb|ADD76129.1| QueA [Pantoea ananatis LMG 20103]
Length = 367
Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats.
Identities = 134/359 (37%), Positives = 201/359 (55%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ + +D+ L D +V
Sbjct: 12 MRVADFAFELPESLIAHYPQAQRSGCRLLSLDGPSGA---LAHGVFTDVLDKLQPGDLLV 68
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + R SK K G L
Sbjct: 69 FNNTRVIPARVFGRKAS-----GGKIEMLVERMLDDKRVLAHVRASKAPKPGAELLLGDD 123
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ ++AT++ + + L + + ++ VG +PLPPYI RP + D
Sbjct: 124 E---SVKATMVARHDA---LFEIAFEDDRAVLDILNSVGHMPLPPYI--DRPDEEADREL 175
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y+ G+VAAPTAGLHF L+ L G+++ FVTLHVGAGTF PV+VE ++H
Sbjct: 176 YQTVYSARPGAVAAPTAGLHFDEPLIQALKDKGVEMAFVTLHVGAGTFQPVRVETIEEHH 235
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFI 297
MH+E + A+ + K+RG ++V+VGTTS+R LE+A ++D +I P+ T IFI
Sbjct: 236 MHAEYAEVPQEVVDAVLACKARGNKVVAVGTTSVRSLESAAKASQDALIAPFFDDTQIFI 295
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY ++ +D L++NFHLP+STL+MLVSAF G + T Y+ A++ YRF+SYGD +
Sbjct: 296 YPGYEYQVIDALITNFHLPESTLIMLVSAFAGYQHTMAAYRAAVAEEYRFFSYGDAMFI 354
>gi|83952643|ref|ZP_00961373.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseovarius
nubinhibens ISM]
gi|83835778|gb|EAP75077.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseovarius
nubinhibens ISM]
Length = 348
Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats.
Identities = 168/359 (46%), Positives = 229/359 (63%), Gaps = 11/359 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RPV PR +ARL+V I D V DL +L D +V
Sbjct: 1 MKLSDFDFDLPEELIATRPVRPRPAARLLVAEG-----AAIRDAHVRDLGQWLRPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L+G+R + I TL W +P K +++G+++ F +
Sbjct: 56 LNDTKVIPARLSGLRHREGSEAGARIEVTLLEPDGQGQWGALIKPLKKLREGEVVAFAAG 115
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L AT++ K G+ LL F++ G + + ++ G +PLPPYIA KRP DA+D+ DY
Sbjct: 116 -----LSATLVAKSE-GQGLLRFNLEGDDFDAALAEAGAMPLPPYIAAKRPADAQDHEDY 169
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +G+VAAPTA LHF LL+ L G+++ VTLHVGAGTF+PVKVED H M
Sbjct: 170 QTVFARNKGAVAAPTASLHFDEALLAALRGQGVEMTHVTLHVGAGTFLPVKVEDVTTHKM 229
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G + A + + ++ GGRI+ VGTT+LRL+ETA+ E G I PW G T+IFI PG
Sbjct: 230 HAEWGEVSEKAAAEIAATRAAGGRIIPVGTTALRLIETASRETGEIAPWQGETDIFIYPG 289
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
+ FRA D LM+NFHLPKSTL+MLVSA G + ++Y+HAI+ YRF+SYGD SLL +
Sbjct: 290 FTFRATDALMTNFHLPKSTLMMLVSALMGKDRMARVYEHAIAEKYRFFSYGDASLLIPE 348
>gi|221133849|ref|ZP_03560154.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Glaciecola
sp. HTCC2999]
Length = 346
Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats.
Identities = 132/361 (36%), Positives = 201/361 (55%), Gaps = 23/361 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F F LP IA P R ++RL+ + I+ H ++ F+ + D ++
Sbjct: 1 MKTSDFGFTLPEHLIAKYPTQQRSASRLLHLDGKTGA---IAHHQFKNMLQFVEAGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + + + SK K G L
Sbjct: 58 FNNTRVIPARLLGQK-----STGGKIEVLVERMLDDHRVLAHVKSSKSPKPGAQLIL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ +EAT++ + L SG E + + G +PLPPYI RP + D
Sbjct: 110 --EEVIEATMLGRHGA---LFELEFSGNESVLDLLEAHGHMPLPPYI--DRPDEDGDKER 162
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y + G+VAAPTAGLHF +L+++ G+++ FVTLHVGAGTF PVKV++ ++H+
Sbjct: 163 YQTVYNEKPGAVAAPTAGLHFDDEILAQIKDKGVQIEFVTLHVGAGTFQPVKVDNVEEHV 222
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT----TEDGIINPWSGFTNI 295
MH+E + A+ + K+ G R+++VGTTS+R LE+A + +I P+ T I
Sbjct: 223 MHAEYAEVPDAVVAAIKATKAAGKRVIAVGTTSMRSLESAAKKADATNELIVPFYEDTEI 282
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PG+ F+ VD + +NFHLP+STL+ML+SA G E + Y AI+H YRF+SYGD+
Sbjct: 283 FIYPGFEFKVVDAMFTNFHLPESTLMMLISALAGKENVMQAYAEAIAHEYRFFSYGDSMF 342
Query: 356 L 356
+
Sbjct: 343 I 343
>gi|253999982|ref|YP_003052045.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylovorus sp. SIP3-4]
gi|253986661|gb|ACT51518.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylovorus sp. SIP3-4]
Length = 351
Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats.
Identities = 150/360 (41%), Positives = 211/360 (58%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++FDF LP IA P RD +RL+ + N I+DH +LP FLN+ D ++
Sbjct: 1 MRTEDFDFFLPEELIAQFPAAERDGSRLLRLDGNSGA---IADHQFRELPQFLNAGDVLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + I + + + + R S+ K G +
Sbjct: 58 FNDTRVIKARLQGHKESGGS-----IELLIERPLDTHRALAHIRASRSPKPGSRIFIGDG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A VI++ + + L+ L + G +PLPPYI DA D Y
Sbjct: 113 -----IPARVIERQDD--LFLIEVEHVTPLLDLLDQYGALPLPPYITH--AADAEDDERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF +L RL + GI++ +VTLHVGAGTF PV+V+D +H M
Sbjct: 164 QTIYARTPGAVAAPTAGLHFNQVMLDRLQAAGIQIAYVTLHVGAGTFQPVRVDDISEHRM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSEI + T +N+ ++ G +I +VGTT+LR LE+A G + SG T+IFITPG
Sbjct: 224 HSEIYTVPPATVDLINTARAAGHKITAVGTTALRALESAARS-GALVAGSGETDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRF+ V+ L++NFHLPKSTL+MLVSAF G+E + Y HAI+ YRF+SYGD LL ++
Sbjct: 283 YRFQVVERLLTNFHLPKSTLMMLVSAFAGVEHIRAAYAHAIASRYRFFSYGDAMLLERRE 342
>gi|317493041|ref|ZP_07951465.1| tRNA ribosyltransferase-isomerase [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316919163|gb|EFV40498.1| tRNA ribosyltransferase-isomerase [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 357
Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats.
Identities = 130/359 (36%), Positives = 202/359 (56%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP + IA P R + RL+ + + + +D+ +++ D ++
Sbjct: 1 MRVSDFSFELPDNLIARYPQAERSACRLLSLDGPTGK---LEHGVFTDVLNKIDAGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKLEVLVERLLDDTRVLAHVRASKSPKPGAELLLGDN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + T++ + +T + + G ++ ++ G +PLPPYI RP + D Y
Sbjct: 113 ED---IRVTMVARHDT--LFELRFEDGRDVLTILNAAGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ ++H M
Sbjct: 166 QTVYSSRPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIENHTM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE--TATTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R +E A +D +I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLACKARGNRVIAVGTTSVRSIESAAAAAKDQLIAPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY ++ +D L++NFHLP+STL+MLVSAF G + T Y A++ YRF+SYGD +
Sbjct: 286 PGYHYQVIDALITNFHLPESTLIMLVSAFAGYKNTMHAYHEAVAKEYRFFSYGDAMFIT 344
>gi|99080934|ref|YP_613088.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ruegeria
sp. TM1040]
gi|122398114|sp|Q1GHP0|QUEA_SILST RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|99037214|gb|ABF63826.1| Queuosine biosynthesis protein [Ruegeria sp. TM1040]
Length = 349
Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats.
Identities = 165/360 (45%), Positives = 218/360 (60%), Gaps = 13/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RP PR SARL+V + ISD V+DL +L D +V
Sbjct: 1 MKLGDFDFDLPEELIATRPAVPRSSARLLVAEQDR-----ISDGRVTDLLDWLAPGDRLV 55
Query: 61 FNNTKVITAQLNGVRF--CHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L+G R I TL + SW+ +P K IK G+ L F
Sbjct: 56 LNDTRVIPARLSGQRHRNSAQGPVSARIEVTLLEPQADGSWAGLLKPLKKIKIGETLRFS 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
L A ++D + G+ L F+++G + + ++ G +PLPPYIA KRP D +D
Sbjct: 116 DA-----LSAELVDVVD-GQGRLRFNLAGDDFDAALAEAGAMPLPPYIAAKRPADEQDKT 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LL L G+ +VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVWARNSGAVAAPTASLHFDEPLLKALSEKGVTFTYVTLHVGAGTFLPVKVEDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A + + K+ G R++ VGTT+LRL+E+A E G I PW G T+IFI
Sbjct: 230 KMHAEWGQVTPEAAAEIAATKAAGNRVIPVGTTALRLIESAARESGAITPWEGETDIFIY 289
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ FR D LM+NFHLPKSTL+MLVSA G + + +Y HA+ YRF+SYGD SLL
Sbjct: 290 PGFEFRVADALMTNFHLPKSTLMMLVSALMGQDRIRAIYAHAVKERYRFFSYGDASLLIP 349
>gi|315499637|ref|YP_004088440.1| s-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Asticcacaulis excentricus CB 48]
gi|315417649|gb|ADU14289.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Asticcacaulis excentricus CB 48]
Length = 348
Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats.
Identities = 174/359 (48%), Positives = 224/359 (62%), Gaps = 13/359 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDFDLP RIALRPV PR++ARL+ V + D V DLP+ L + D +V
Sbjct: 1 MKVSDFDFDLPEDRIALRPVTPREAARLLRVDGVVR-----EDWRVGDLPSLLKAGDLLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ QL G R + TL + W + +P + I++GD L F
Sbjct: 56 INNTRVLPTQLKGTRVR--EGQTVAFEATLIKSLDGQRWQAFLKPGRRIREGDTLRF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A V+ K G +L F + E+ + +G +PLPPYI KRP D +D DY
Sbjct: 111 ---DDLSARVLSKDEDGVYVLRFEQAASEVLNGLHRLGGMPLPPYIRSKRPEDEQDKSDY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +GSVAAPTAGLHFT LL L G+ VTLHVGAGTF+PVKVEDT DH M
Sbjct: 168 QTVFARDEGSVAAPTAGLHFTPELLQALRDKGVLFEEVTLHVGAGTFLPVKVEDTKDHRM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G + A +A +N+ + GGRI+++GTT+LRL+E+A DG I+P+SG T+IFITPG
Sbjct: 228 HAEFGVVSADSAARINAARVAGGRIIAIGTTALRLIESACDADGRIHPFSGDTDIFITPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
R+ D+L +NFHLPKSTL MLV AF G E K Y HAI+ YRF+SYGD SLL K
Sbjct: 288 VPVRSADMLWTNFHLPKSTLFMLVCAFAGTEAMKAAYAHAINSGYRFFSYGDASLLTNK 346
>gi|148269489|ref|YP_001243949.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Thermotoga
petrophila RKU-1]
gi|170288163|ref|YP_001738401.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Thermotoga
sp. RQ2]
gi|281411793|ref|YP_003345872.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Thermotoga
naphthophila RKU-10]
gi|166218754|sp|A5IJK0|QUEA_THEP1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|238688813|sp|B1L8S0|QUEA_THESQ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|147735033|gb|ABQ46373.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Thermotoga
petrophila RKU-1]
gi|170175666|gb|ACB08718.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Thermotoga
sp. RQ2]
gi|281372896|gb|ADA66458.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Thermotoga
naphthophila RKU-10]
Length = 335
Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats.
Identities = 141/357 (39%), Positives = 193/357 (54%), Gaps = 22/357 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V EFD++LP IA PV PRD++RLMV+H I + ++ +L D +V
Sbjct: 1 MKVSEFDYELPSELIAQEPVEPRDASRLMVLHRKTQ---RIEHRIFREIIEYLEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N +KVI A+L + + I L R+ W RP + +KKG L
Sbjct: 58 LNVSKVIPARLYARK-----KTGASIEILLIERLEEGIWKCLVRPGQKVKKGTELVI--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A + + G +L F +R I G PLPPYI + P+ Y
Sbjct: 110 --DEDLSAVCLGRGEDGTRILKFQPQD---DRLIFEKGRTPLPPYIKNEVPL-----ERY 159
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GSVAAPTAGLHFT L+ +L G++ V LHVG GTF PVKVE+ + H M
Sbjct: 160 QTVYAKEEGSVAAPTAGLHFTPELIEKLKKKGVQFAEVVLHVGIGTFRPVKVEEVEKHKM 219
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + T + L + RG RIV+VGTT++R LET + G T++FI P
Sbjct: 220 HEEFYQVTKETIKKLRETRERGNRIVAVGTTTVRTLETIARLPEQ-EEYVGKTDLFIYPP 278
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+ VD L++NFHLP+STLLMLV+AF G + + Y+ A+ YRF+S+GD L+
Sbjct: 279 FEFKLVDALITNFHLPRSTLLMLVAAFAGKDFVMEAYREAVKRRYRFFSFGDAMLIL 335
>gi|95929301|ref|ZP_01312045.1| S-adenosylmethionine [Desulfuromonas acetoxidans DSM 684]
gi|95134799|gb|EAT16454.1| S-adenosylmethionine [Desulfuromonas acetoxidans DSM 684]
Length = 350
Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats.
Identities = 138/360 (38%), Positives = 198/360 (55%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F++DLP IA P RD +RLMV+ ++SDH + + D +V
Sbjct: 1 MYVTDFNYDLPQELIAQHPCEQRDGSRLMVLDCQ--AEKIVSDH-FRQVDRYFEQGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV--SPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L G + ++ L ++ W R SK + G L
Sbjct: 58 INDTRVIPARLLGCKES-----GGKVEVFLVRKLAEEGECWLCLTRASKGPRPGTRLLLG 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
Q L ATV++ G + F + G + + +G +PLPPYI R D
Sbjct: 113 DQ-----LTATVMEGGGDGYRHIRFDVEG-DFLSLLDKIGRLPLPPYI--DREPQGEDRE 164
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQTT++ G+VAAPTAGLHFT +L +L + G+ V +TLHVG GTF+PV+V++ ++H
Sbjct: 165 RYQTTFSSRPGAVAAPTAGLHFTPEILDKLRAKGVIVCPLTLHVGLGTFLPVRVDNVEEH 224
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E I TA +N K G R++++GTT R LE + G + G T++FI
Sbjct: 225 RMHAEAYCIPDETAVQVNRAKREGRRVIALGTTVTRTLEFSVDPQGELQAGDGMTDMFIY 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGYRF+ VD L++NFHLP+STLLMLVSA G E + Y+ A+ YRF+SYGD L+
Sbjct: 285 PGYRFKIVDALLTNFHLPQSTLLMLVSALAGREFVLQAYRQAVEERYRFFSYGDCMLIHN 344
>gi|145589968|ref|YP_001156565.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
gi|189038872|sp|A4SZT7|QUEA_POLSQ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|145048374|gb|ABP35001.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
Length = 348
Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats.
Identities = 146/358 (40%), Positives = 196/358 (54%), Gaps = 16/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F+++LPP IA P+ R +RL+ V + + D D+ D +V
Sbjct: 1 MQLSDFNYELPPELIAQHPLANRTDSRLLEVRADGMNHAHLVDRQFKDILILAQPGDLLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI A+L+G + N + + V R SKV K G +H ++Q
Sbjct: 61 FNDTKVIPARLHGKKETGGN-----VELLIERISGEKQAWVQIRASKVPKTGSTVHIYNQ 115
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G++ + E+L + + G +PLPPYI + D D Y
Sbjct: 116 SGETFSVEMIGYDGRFYEVLFPDH-----VFSLLERFGKLPLPPYIEHQ--PDGEDAQRY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT AK G+VAAPTAGLHF +L +L +G+ VTLHVGAGTF PV+ ED H M
Sbjct: 169 QTVVAKNPGAVAAPTAGLHFDEVILQKLKDVGVNQATVTLHVGAGTFTPVREEDLSKHQM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I T QA+ K GGRI++VGTTSLR LE+ SG TN+FITPG
Sbjct: 229 HYEWFSIPKETLQAIEKTKKNGGRIIAVGTTSLRALESQANS----QQSSGETNLFITPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y+F+ VD L++NFHLPKSTLLMLVSAF G++ + YQHAI+ YRF+SYGD L +
Sbjct: 285 YQFKVVDCLLTNFHLPKSTLLMLVSAFAGVDNIRSAYQHAINQQYRFFSYGDAMFLCR 342
>gi|260063740|ref|YP_003196820.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Robiginitalea biformata HTCC2501]
gi|88783185|gb|EAR14358.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Robiginitalea biformata HTCC2501]
Length = 349
Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats.
Identities = 145/361 (40%), Positives = 199/361 (55%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F+F+LP +A P RD ++LMVVH I L DL + +D +V
Sbjct: 1 MKLSHFNFELPKELLAEYPTENRDESKLMVVHRETGK---IEHKLFKDLIDYFEEDDVVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 LNNTKVFPARLYGNK----EKTGARIEVFLLRELNEEQRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
+ L A VID + L F G + R++ +G PLP YI KR + D
Sbjct: 114 EDEA---LVAEVIDNTTSRGRTLRFLYDGSYTDFRRKMRELGQTPLPKYI--KRDPEPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ +LL RL GI +TLHVG GTF PV+VED
Sbjct: 169 ESRYQTIYAKYEGAVAAPTAGLHFSKHLLKRLEIKGINFAELTLHVGLGTFSPVEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE ID + +N+ K ++ +VGTT +R LE+A + + ++N G+TN F
Sbjct: 229 KHKMDSEELVIDERATEIVNTAKKNKRKVCAVGTTVMRGLESAVSSEHMLNTHEGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFHLPKSTLLM+VSAF G + K+ Y+ AI YRFYSYGD L+
Sbjct: 289 IFPPYEFSIANCMVTNFHLPKSTLLMMVSAFMGHDLMKRAYKEAILEQYRFYSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 L 349
>gi|271499567|ref|YP_003332592.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Dickeya
dadantii Ech586]
gi|270343122|gb|ACZ75887.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Dickeya
dadantii Ech586]
Length = 355
Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats.
Identities = 135/360 (37%), Positives = 204/360 (56%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ + +DL L D +V
Sbjct: 1 MRVADFSFELPESLIARYPQAQRSGCRLLSLDGPTGA---VAHGVFTDLLDKLQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK K G +L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKLEVLVERMLDDKRVLAHVRASKAPKPGTVLLLGED 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++AT++ + + + + ++ ++ +G +PLPPYI RP +A D Y
Sbjct: 113 E---SVKATMLARHDA--LFEIQFDDTRDVLTILNDIGHMPLPPYI--DRPDEAADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L G+++ FVTLHVGAGTF PV+VE +DH+M
Sbjct: 166 QTVYSQRPGAVAAPTAGLHFDEPLLAALKEKGVEMAFVTLHVGAGTFQPVRVESIEDHVM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLL--ETATTEDGIINPWSGFTNIFIT 298
H+E + A+ + K+RG R+++VGTTS+R L + + +I P+ G T IFI
Sbjct: 226 HAEYAEVPQTVVDAVLACKARGNRVIAVGTTSVRSLESAAQASAEAVIAPFFGDTRIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ VD L++NFHLP+STL+MLVSAF G T Y+ A++ YRF+SYGD + +
Sbjct: 286 PGYHYQVVDALVTNFHLPESTLIMLVSAFVGYRHTMDAYRQAVAEQYRFFSYGDAMFITR 345
>gi|315923966|ref|ZP_07920194.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pseudoramibacter alactolyticus ATCC 23263]
gi|315622806|gb|EFV02759.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pseudoramibacter alactolyticus ATCC 23263]
Length = 349
Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats.
Identities = 140/358 (39%), Positives = 200/358 (55%), Gaps = 13/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++F +DLP IA P RD +RLM ++ I D D+ +LN D +V
Sbjct: 4 LRTEDFYYDLPERLIAQTPAEKRDDSRLMAINRATDA---IEDRHFHDIIDYLNPGDLLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A++ G + + L R+ W +P + + G L F+
Sbjct: 61 MNDTKVLPARIFGRKA----DTGARVELLLLTRLDDYRWETMVKPGRKARPGTTLDFYDA 116
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L T+ + G ++ F G+ E + ++GT+PLPPYI D Y
Sbjct: 117 AGARVLRGTIEKTVDGGLRVIRFEYDGV-FEAILDVIGTMPLPPYIHE----TLEDQSRY 171
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GS AAPTAGLHFT LL + + G+ + VTLHVG GTF PVK + +H M
Sbjct: 172 QTVYAEHDGSAAAPTAGLHFTDALLGAIAAKGVGLAKVTLHVGIGTFRPVKAANIREHHM 231
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
HSE + TA+A+ + K+ GGRI++VGTT++R LE+ A DG I G T+IFI P
Sbjct: 232 HSERYLVPKETAEAIAATKTAGGRIIAVGTTTVRTLESVARDHDGKIVAAGGSTDIFIYP 291
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
G+ ++ VD L++NFHLP+STLLMLVS+F ++ YQHAI YRF+S+GD L+
Sbjct: 292 GFHWQVVDALITNFHLPESTLLMLVSSFYDRKKILAAYQHAIDENYRFFSFGDAMFLY 349
>gi|325286897|ref|YP_004262687.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase [Cellulophaga
lytica DSM 7489]
gi|324322351|gb|ADY29816.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase [Cellulophaga
lytica DSM 7489]
Length = 349
Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats.
Identities = 143/361 (39%), Positives = 203/361 (56%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F+F+LP + +A P RD A+LMV+H I + DL + + D +V
Sbjct: 1 MKLSSFNFELPDNLLAEYPSEHRDEAKLMVIHRETGK---IEHKMFKDLINYFDEGDVMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 LNNTKVFPARLYGNK----EKTGARIEVFLLRELNAEQRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
+ L A VID + L F G + +++ +G PLP YI KR ++ D
Sbjct: 114 DDE---TLVAEVIDNTTSRGRTLRFLYDGSYTDFRQKLKDLGETPLPKYI--KREVEESD 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ +LL RL G+ +TLHVG GTF PV+VED
Sbjct: 169 EDRYQTIYAKHEGAVAAPTAGLHFSKHLLKRLEIKGVDFAELTLHVGLGTFNPVEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE ID + +N+ RI ++GTT++R LE+A + +G +N + G+TN F
Sbjct: 229 KHKMDSEELVIDEKATEVVNAAIDNKRRICAIGTTAMRGLESAVSSNGHLNTYEGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFHLPKSTLLM+VSAF G + KK Y+ AI +Y+FYSYGD L+
Sbjct: 289 IFPPYDFSIANSMVTNFHLPKSTLLMMVSAFIGHDLMKKAYKEAILESYKFYSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|307825676|ref|ZP_07655893.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylobacter tundripaludum SV96]
gi|307733253|gb|EFO04113.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylobacter tundripaludum SV96]
Length = 339
Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats.
Identities = 137/357 (38%), Positives = 208/357 (58%), Gaps = 20/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F++ LP + IA +P+ RD++RL+ + N+ I D +D +N D ++
Sbjct: 1 MKKSDFNYQLPDALIAQKPLAERDASRLLCMDRNIGG---IVDRQFTDFIDLINERDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI A+L G + + ++ + + + + R SK K G ++
Sbjct: 58 FNDTKVIPARLFGTK-----QSGGKVEILIERILDEHHAIAHVRASKSSKAGTLIEL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGI-ELERQISLVGTIPLPPYIARKRPIDARDYVD 179
V+ + + L G L + +G IPLPPYI R+ D D
Sbjct: 110 --DKGYCCEVLGRVDD---LFQLEFKGDNSLLSILEQIGHIPLPPYITRE--DDQSDLTR 162
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A+ G+VAAPTAGLHF ++ +L + G++ FVTLHVG+GTF PV+VE+ +H+
Sbjct: 163 YQTVFAREAGAVAAPTAGLHFDQAMMEKLKARGVQSAFVTLHVGSGTFQPVRVENLSEHL 222
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH E + T A+ K+RGGR++++GTT++R LE+A ++ G++ G T++FITP
Sbjct: 223 MHKEYFVVLPETVAAVQQAKARGGRVIAIGTTAVRALESA-SKSGLLEAGFGDTDLFITP 281
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+FR+VD +++NFHLP+STLLMLVSAF G E Y HAI +YRF+SYGD L
Sbjct: 282 GYQFRSVDAMLTNFHLPESTLLMLVSAFAGYEHIMNAYSHAIDQSYRFFSYGDAMFL 338
>gi|85708532|ref|ZP_01039598.1| S-adenosylmethionine:tRNA-ribosyltransferase [Erythrobacter sp.
NAP1]
gi|85690066|gb|EAQ30069.1| S-adenosylmethionine:tRNA-ribosyltransferase [Erythrobacter sp.
NAP1]
Length = 345
Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats.
Identities = 184/358 (51%), Positives = 236/358 (65%), Gaps = 13/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP RIALRPV PRD+AR++VV + ++DH VSDLP L D +V
Sbjct: 1 MRVDLFDFELPQERIALRPVRPRDAARMLVVEGSQGP---LADHGVSDLPCLLRPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI AQL G R E +I TLH R+ W + R +K +K+GD L F
Sbjct: 58 FNDTRVIPAQLEGRRSGG----EAKIGATLHKRIDLRRWQAFIRNAKRVKEGDHLVFG-- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A + G + L+F + +E + GT+PLPPYIA++R +D +D DY
Sbjct: 112 ---GGVTAIAEKRHRDGSMTLLFEGT-EPVEVLLDRAGTMPLPPYIAQRRGVDDQDQSDY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A G+VAAPTA LHFT+ L+S L GIK +TLHVGAGTF+PVK EDT DH M
Sbjct: 168 QTMFAAEDGAVAAPTASLHFTTRLVSALDHAGIKREMLTLHVGAGTFLPVKAEDTKDHQM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE G I+A TA +N ++ GGR+++VGTTSLRLLE+A EDG + ++G T+IFITPG
Sbjct: 228 HSEFGRINAGTASRINEARAAGGRVIAVGTTSLRLLESAAGEDGKLREFAGDTDIFITPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y FR VD LM+NFHLPKSTL+MLVSA G E + Y+HAI+ YRFYSYGD+SLL
Sbjct: 288 YPFRVVDGLMTNFHLPKSTLMMLVSALMGRERMMEAYEHAIAQNYRFYSYGDSSLLLP 345
>gi|264680590|ref|YP_003280500.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Comamonas
testosteroni CNB-2]
gi|262211106|gb|ACY35204.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Comamonas
testosteroni CNB-2]
Length = 362
Score = 438 bits (1128), Expect = e-121, Method: Composition-based stats.
Identities = 151/368 (41%), Positives = 203/368 (55%), Gaps = 23/368 (6%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDFDLP S IA P R ++RL+ L +D + +LP L D +VF
Sbjct: 9 TLSDFDFDLPESLIAQHPTAVRSASRLL-----DGRSLPPTDRIFRELPDLLQPGDLLVF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKVI A++ G + +I + + N + R SK G +H
Sbjct: 64 NDTKVIKARVFGEKAS-----GGKIELLVERVLQNNEVVAHMRVSKKPLPGAKIHLCGGL 118
Query: 122 GQSRLEATVIDKWNTGEILLVFS----ISGIELERQISLVGTIPLPPYIAR-----KRPI 172
EAT++ +W G L G + G +PLPPYI R P
Sbjct: 119 KNGGFEATLLGRWPDGNGPLFHLSFKGNQGESPYELLEQFGHLPLPPYIERQQNAEHDPD 178
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+ D YQT +A G+VAAPTA LHF +L+ L + G++ VTLHVGAGTF PVK
Sbjct: 179 EKEDSERYQTVFAAHPGAVAAPTAALHFDETVLAALQAKGVERASVTLHVGAGTFQPVKT 238
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
E DH MHSE I PT A+ + RGGRI++VGTT++R LE+ I SG
Sbjct: 239 EKLADHTMHSEWYDIPLPTLAAMERCRQRGGRIIAVGTTTVRTLESWAKYGNI----SGD 294
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFITPG++++ VD+L++NFHLPKSTL+MLVSAF G E MYQHAI+ YRF+SYGD
Sbjct: 295 TSIFITPGFQYQVVDMLITNFHLPKSTLMMLVSAFAGYEHIMGMYQHAIAQHYRFFSYGD 354
Query: 353 TSLLFQKR 360
+ LL ++R
Sbjct: 355 SMLLERRR 362
>gi|327392946|dbj|BAK10368.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Pantoea ananatis AJ13355]
Length = 356
Score = 438 bits (1128), Expect = e-121, Method: Composition-based stats.
Identities = 134/359 (37%), Positives = 201/359 (55%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ + +D+ L D +V
Sbjct: 1 MRVADFAFELPESLIAHYPQAQRSGCRLLSLDGPSGA---LAHGVFTDVLDKLQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARVFGRKAS-----GGKIEMLVERMLDDKRVLAHVRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ ++AT++ + + L + + ++ VG +PLPPYI RP + D
Sbjct: 113 E---SVKATMVARHDA---LFEIAFEDDRAVLDILNSVGHMPLPPYI--DRPDEEADREL 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y+ G+VAAPTAGLHF L+ L G+++ FVTLHVGAGTF PV+VE ++H
Sbjct: 165 YQTVYSARPGAVAAPTAGLHFDEPLIQALKDKGVEMAFVTLHVGAGTFQPVRVETIEEHH 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFI 297
MH+E + A+ + K+RG ++V+VGTTS+R LE+A ++D +I P+ T IFI
Sbjct: 225 MHAEYAEVPQEVVDAVLACKARGNKVVAVGTTSVRSLESAAKASQDALIAPFFDDTQIFI 284
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY ++ +D L++NFHLP+STL+MLVSAF G + T Y+ A++ YRF+SYGD +
Sbjct: 285 YPGYEYQVIDALITNFHLPESTLIMLVSAFAGYQHTMAAYRAAVAEEYRFFSYGDAMFI 343
>gi|312891440|ref|ZP_07750957.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Mucilaginibacter paludis DSM 18603]
gi|311296134|gb|EFQ73286.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Mucilaginibacter paludis DSM 18603]
Length = 349
Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats.
Identities = 131/361 (36%), Positives = 192/361 (53%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP S +A P RD +RL+V+H + I + D+ + + D ++
Sbjct: 1 MKLSQFKFNLPESLVAHSPSENRDESRLLVLHRDSGK---IEHKIFKDVLNYFDDKDVMI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 INNTKVFPARLYGNK----EKTGATIEVFLLRELNKELRLWDVLVDPARKIRVGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D L A V+D + + F G E R + ++G PLP YI RK D
Sbjct: 114 DDD---LLIAEVVDNTTSRGRTIRFLFDGTDEEFRRNVEILGETPLPKYIKRK--ATEED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT +AK +G+VAAPTAGLHF+ L+ RL G++ VTLHVG GTF V+VED
Sbjct: 169 KERYQTIFAKNEGAVAAPTAGLHFSRELMKRLELKGVEFAEVTLHVGLGTFRTVEVEDLT 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I+ A +N RI +VGTTS+R +E+A + + + + +T+ F
Sbjct: 229 KHKMDSEQFIIEQKQADIVNRGIENKKRICAVGTTSMRTIESAVSANKTLKAANDWTSKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH P+STLLM++ AF G E Y+ A+ YRFYSYGD ++
Sbjct: 289 IFPPYDFSIANSMITNFHTPESTLLMMICAFGGYENVMNAYEVAVKEKYRFYSYGDAMMI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|206901815|ref|YP_002251314.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Dictyoglomus thermophilum H-6-12]
gi|206740918|gb|ACI19976.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Dictyoglomus thermophilum H-6-12]
Length = 339
Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats.
Identities = 139/357 (38%), Positives = 204/357 (57%), Gaps = 20/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + ++D+ LP IA P PRD++RLM+V+ + + ++ +L + D +V
Sbjct: 3 LKLSDYDYYLPEELIAQEPAEPRDTSRLMLVNRKTGEINI---TIFREIKNYLKAGDVLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L G + +I L ++ + +P K K G +HF
Sbjct: 60 LNNTKVIPARLYGKKE-----TGAKIEVLLLKKIGEGKYEALLKPGKRAKIGTKIHFLED 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A V+++ G +L FS +L++ + +G IPLPPYI K+PID D Y
Sbjct: 115 -----IYAEVVERNEEGIFVLKFSQE--DLDKILPEIGNIPLPPYI--KKPID--DPNKY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +G+VAAPTAGLHFT LL L +G+++ ++TLHVG GTF PV VED H +
Sbjct: 164 QTVYAQKEGAVAAPTAGLHFTEELLKTLGEMGVEILYITLHVGLGTFRPVVVEDITKHKL 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
E + A+ +N K R+++VGTT R+LE A G + P SG ++FI PG
Sbjct: 224 DPEYFEVSDEVAERINKAKEERRRVIAVGTTVTRVLE-AQGRSGKVEPGSGLVDLFIYPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+ +D L++NFHLPKSTLLMLV+AF G + KK Y AI RFYS+GD ++
Sbjct: 283 FEFKIIDGLITNFHLPKSTLLMLVAAFMGYDLMKKAYNKAIEERMRFYSFGDAMFIY 339
>gi|330446694|ref|ZP_08310346.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328490885|dbj|GAA04843.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 350
Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats.
Identities = 139/363 (38%), Positives = 202/363 (55%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDF+LP IA P R ++RL+ + N ++ D+ + D +V
Sbjct: 1 MQVSDFDFELPDELIARYPQPERTASRLLQMTGNTG---ELAHKCFKDVLDLVQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + S + R SK K G+ L
Sbjct: 58 FNNTRVIPARMFGHKAS-----GGKIEVLVERMLDDKSILAHVRASKPPKPGNELLLGE- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
A ++ + + + + S + + +VG +PLPPYI RP + D Y
Sbjct: 112 --NGEFSAEMVARHDA--LFEIRFNSDKTVLEILDIVGHMPLPPYI--DRPDEDADKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y G+VAAPTAGLHF L++ L + G+ FVTLHVGAGTF PV+V D +DH M
Sbjct: 166 QTVYNAKPGAVAAPTAGLHFDDKLMADLKAKGVNFAFVTLHVGAGTFQPVRVNDINDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTNIF 296
HSE + A+N ++ GGR+++VGTTS+R LE+A + P+ G T+IF
Sbjct: 226 HSEYVEVPEEVVAAVNETRANGGRVIAVGTTSVRSLESAAQDALKKGTEFKPFFGDTDIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+F+ VD L++NFHLP+STL+MLVSAF G E T Y A+++ YRF+SYGD+ +
Sbjct: 286 IFPGYQFQLVDALITNFHLPESTLIMLVSAFAGYENTMNAYHEAVANKYRFFSYGDSMFI 345
Query: 357 FQK 359
+K
Sbjct: 346 TRK 348
>gi|241664129|ref|YP_002982489.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ralstonia
pickettii 12D]
gi|240866156|gb|ACS63817.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Ralstonia
pickettii 12D]
Length = 356
Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats.
Identities = 153/358 (42%), Positives = 212/358 (59%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FDFDLPP IA + R ++RL+ V + D +DL +L D +V
Sbjct: 2 LTLSDFDFDLPPELIAQTALPDRTASRLLAVRR-AGDAVHFEDRQFADLVDYLRPGDLLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+ G + ++ + + ++ R SK +G L
Sbjct: 61 FNDTRVIKARFFGQKAS-----GGKVEVLVERLLDEHTVLAQIRSSKSPVEGTTLRLADA 115
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ TV + L F ++L I G +PLPPYI D+ D Y
Sbjct: 116 -----FDVTVGPRAEPF-FTLRFPQPALDL---IEQYGRLPLPPYIEHD--PDSFDETRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF L ++L ++GI+ F+TLHVGAGTF PV+VE+ +H M
Sbjct: 165 QTVYARNPGAVAAPTAGLHFDDALFAKLDAMGIQRGFLTLHVGAGTFQPVRVENIAEHRM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I A A+A+ + ++ GGRI++VGTTS+R LE+A DG +N SG T+IFITPG
Sbjct: 225 HSEWYEITAELAEAIRATRAAGGRIIAVGTTSMRALESAAQPDGTLNACSGETDIFITPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRFRAVD+L++NFHLPKSTLLMLVSAF G+ ++ YQHAI+ YRF+SYGD LL +
Sbjct: 285 YRFRAVDLLVTNFHLPKSTLLMLVSAFAGMSAIREAYQHAIAQRYRFFSYGDAMLLTR 342
>gi|320106498|ref|YP_004182088.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Terriglobus
saanensis SP1PR4]
gi|319925019|gb|ADV82094.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Terriglobus
saanensis SP1PR4]
Length = 356
Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats.
Identities = 146/365 (40%), Positives = 208/365 (56%), Gaps = 19/365 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLPP IA +P RD+AR++ V + + D DLP L D +V
Sbjct: 1 MRVSDFHFDLPPELIAQKPPVERDAARMLTVDRSTG---HLEDKNFLDLPDLLRKGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRRE-----KEISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
NN++VI A+L R + +I L W +P + ++ G+ L
Sbjct: 58 LNNSRVIPARLFARRAGLRTQSSSPAPSGQIEVLLTQPFGGGRWRALVKPGRKVQVGERL 117
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
F G+ L+A V++ GE L F+ + + +G +PLPPYI R A
Sbjct: 118 VF----GEDELQAEVMETGEFGERTLRFA-PNPDFFATLERIGHMPLPPYIH--RADSAE 170
Query: 176 DYVDYQTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT ++ ++ GS AAPTAGLHFT L+++ S G++V +TLHVG GTF P++VE
Sbjct: 171 DRSRYQTVFSDLELKGSAAAPTAGLHFTPETLNKIQSKGVQVQQITLHVGLGTFQPLRVE 230
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED--GIINPWSG 291
D + +H E + TA+A+N K+ G R+V+VGTT++R LE ++D + P SG
Sbjct: 231 DLSEIRLHEEPYTLPESTAEAINRAKAEGRRVVAVGTTTVRTLEHCASQDPGQPLAPHSG 290
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T+IF++PGY FR VD L++NFHLP+STLLMLVSAF G E+ Y+HA+ YRF+SYG
Sbjct: 291 TTSIFLSPGYEFRVVDALLTNFHLPQSTLLMLVSAFAGREQVLAAYRHAVESRYRFFSYG 350
Query: 352 DTSLL 356
D L
Sbjct: 351 DCMFL 355
>gi|299532847|ref|ZP_07046234.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Comamonas
testosteroni S44]
gi|298719071|gb|EFI60041.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Comamonas
testosteroni S44]
Length = 362
Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats.
Identities = 152/368 (41%), Positives = 207/368 (56%), Gaps = 23/368 (6%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDFDLP S IA P R ++RL+ L +D + +LP L D +VF
Sbjct: 9 TLSDFDFDLPESLIAQHPTAVRSASRLL-----DGRSLPATDRIFRELPDLLQPGDLLVF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKVI A++ G + +I + + N + R SK G +H
Sbjct: 64 NDTKVIKARVFGEKAS-----GGKIELLVERVLQNNEIVAHMRVSKKPLPGAKIHLCGGL 118
Query: 122 GQSRLEATVIDKW-NTGEILLVFSISGIELE---RQISLVGTIPLPPYIAR-----KRPI 172
EAT++ +W + L S G + E + G +PLPPYI R P
Sbjct: 119 KNGGFEATLLGRWPDENGPLFHLSFKGNQGESPYELLEQFGHLPLPPYIERQQNAEHDPD 178
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+ D YQT +A G+VAAPTA LHF +L+ L + G++ VTLHVGAGTF PVK
Sbjct: 179 EKEDSERYQTVFAAHPGAVAAPTAALHFDETVLAALQAKGVERASVTLHVGAGTFQPVKT 238
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
E+ DH MHSE I PT A+ + RGGRI++VGTT++R LE+ I SG
Sbjct: 239 ENLADHTMHSEWYDIPLPTLAAMERCRQRGGRIIAVGTTTVRTLESWAKYGNI----SGD 294
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFITPG++++ VD+L++NFHLPKSTL+MLVSAF G E MYQHAI+ YRF+SYGD
Sbjct: 295 TSIFITPGFQYQVVDMLITNFHLPKSTLMMLVSAFAGYEHIMGMYQHAIAQHYRFFSYGD 354
Query: 353 TSLLFQKR 360
+ LL ++R
Sbjct: 355 SMLLERRR 362
>gi|254491486|ref|ZP_05104665.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Methylophaga thiooxidans DMS010]
gi|224462964|gb|EEF79234.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Methylophaga thiooxydans DMS010]
Length = 347
Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats.
Identities = 139/358 (38%), Positives = 205/358 (57%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F FDLP IA P R ++RL+ + N + D +DL L+S D +V
Sbjct: 1 MKTSDFRFDLPEELIAQYPSTDRTASRLLALDGNTG---QVQDLNFTDLLNQLDSKDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L G + ++ + + + R SK +G L
Sbjct: 58 FNNTKVIPARLLGHKE-----TGGKVEVLVERVLDHERVLAHVRSSKSPSQGRRLQL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ LE V+ + + + + ++ + + G +PLPPYI R +D D Y
Sbjct: 110 --EGSLEVEVLARHDA--LFELRFLNTDSVVDALESYGRMPLPPYIERD--VDKADLERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL+++ +GI+ +TLHVGAGTF PV+V+D H M
Sbjct: 164 QTVYAQHVGAVAAPTAGLHFDQALLAQIKEMGIETAELTLHVGAGTFQPVRVDDIRSHQM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE+ + Q + + ++RGGR+++VGTTS+R LE+A ++ G I+P+ G T+IFI PG
Sbjct: 224 HSEVIEVSEQVCQQVKAARARGGRVIAVGTTSVRALESA-SQSGEISPFEGETDIFIYPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y+F++VD +++NFHL +STLLMLVSAF YQHA+ YRF+SYGD + +
Sbjct: 283 YQFKSVDAMVTNFHLSESTLLMLVSAFASRSHILNAYQHAVEQRYRFFSYGDAMFITR 340
>gi|254374630|ref|ZP_04990111.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
novicida GA99-3548]
gi|151572349|gb|EDN38003.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
novicida GA99-3548]
Length = 340
Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats.
Identities = 137/357 (38%), Positives = 209/357 (58%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LP IA P+ RD++RL+ ++ I D+ +D F+N D +V
Sbjct: 3 MKTDDFDYKLPEELIASYPLENRDASRLLKLNKQTG---EIVDYKFTDFIDFINPGDLLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV+ A+L G + ++ + +P + + + ++ G ++
Sbjct: 60 FNNSKVMLARLYGSKT-----TGAKLEYLIERIKTPKLFETHIKANRSPAIGSEIYVEDT 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
A V+DK G + L+ ++ R + G IPLPPY+ KR + D Y
Sbjct: 115 ------LAKVLDK--DGGMYLLEIQGDKDIYRLMEEFGHIPLPPYM--KRDDEEFDAERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GSVAAPTAGLHF+ L+ ++ G+ + ++TLHVG+GTF PV+V+D + H M
Sbjct: 165 QTVYAQDLGSVAAPTAGLHFSKELMQQIKDKGVDIAYITLHVGSGTFKPVQVDDVESHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E+ + Q + K GGR++++GTTS+R LETA ++G I P+ G T+IF+ PG
Sbjct: 225 HAEVISVPVEVCQKIRQTKENGGRVIAIGTTSVRSLETA-GQNGQIEPYQGETDIFLYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F VD +++NFHLPKSTL+MLVSAF G E+ K Y+HAI+ YRF+SYGD +F
Sbjct: 284 KKFNVVDAMITNFHLPKSTLIMLVSAFAGKEKIIKAYEHAIAERYRFFSYGDAMFIF 340
>gi|227113369|ref|ZP_03827025.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pectobacterium carotovorum subsp. brasiliensis PBR1692]
Length = 355
Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats.
Identities = 136/359 (37%), Positives = 203/359 (56%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ + +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPQAERSGCRLLSLDGPTGN---LTHGVFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKLEVLVERVLDDHRVLAHVRASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++AT+ + + + + ++ ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SVKATMTARHDA--LFELHFDDARDVLSILNDIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF +L+ L GI + FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSQRPGAVAAPTAGLHFDEPMLAALREKGIDMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE--TATTEDGIINPWSGFTNIFIT 298
H+E + A+ + K+RG R+++VGTTS+R LE +++ I P+ G T IFI
Sbjct: 226 HAEYAEVPQDVVDAVLACKARGNRVIAVGTTSVRSLESAAQASQNAAIEPFFGDTKIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY +R +D L++NFHLP+STL+MLVSAF G + T Y+ A++ YRF+SYGD +
Sbjct: 286 PGYHYRIIDALVTNFHLPESTLIMLVSAFAGYQNTMSAYRQAVAEQYRFFSYGDAMFIT 344
>gi|217967988|ref|YP_002353494.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Dictyoglomus turgidum DSM 6724]
gi|217337087|gb|ACK42880.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Dictyoglomus turgidum DSM 6724]
Length = 339
Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats.
Identities = 139/357 (38%), Positives = 200/357 (56%), Gaps = 20/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + ++D+ LP IA P PRDS+RLM+V+ + + ++ +L S D +V
Sbjct: 3 LKLSDYDYYLPEELIAQEPAEPRDSSRLMLVNRRTGEIDI---TIFREIKNYLKSGDVLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L G + +I L +V + +P K K G ++F
Sbjct: 60 LNNTKVIPARLYGKK-----DTGAKIEVLLLKKVEEGVYEALVKPGKRAKIGTKIYF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A V+++ G +L FS +LE + +G IPLPPYI + D Y
Sbjct: 112 --SGDIYAEVVERKEEGIFVLRFSQE--DLEEILPEIGNIPLPPYIKKP----LNDPNKY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +G+VAAPTAGLHFT LL L +GI++ ++TLHVG GTF PV VED H +
Sbjct: 164 QTVYAQKEGAVAAPTAGLHFTEELLHTLQKMGIEILYITLHVGLGTFRPVVVEDITKHKL 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
E + A+ +N K G R+++VGTT R+LE A G + P +G ++FI PG
Sbjct: 224 DPEYFEVREDVAERINRAKEEGRRVIAVGTTVTRVLE-AQGRSGRVEPGAGLVDLFIYPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+ +D L++NFHLPKSTLLMLV+AF G + KK Y AI RFYS+GD ++
Sbjct: 283 FEFKILDGLITNFHLPKSTLLMLVAAFMGYDLMKKAYNRAIEERMRFYSFGDAMFIY 339
>gi|325103863|ref|YP_004273517.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Pedobacter
saltans DSM 12145]
gi|324972711|gb|ADY51695.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Pedobacter
saltans DSM 12145]
Length = 349
Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats.
Identities = 138/361 (38%), Positives = 191/361 (52%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP S IA P RD +RLMV+H + I L D+ + + D ++
Sbjct: 1 MKLSQFKFHLPDSLIAHYPAETRDESRLMVLHKDTG---EIEHKLFKDVLGYFDDKDVMI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 LNNTKVFPARLYGNK----EKTGATIEVFLLRELNKELRLWDVLVDPARKIRVGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D L A V+D + + F G E + I ++G PLP YI RK A D
Sbjct: 114 DDD---LLVAEVVDNTTSRGRTIRFLFDGTDEEFRQNIEILGETPLPKYIKRK--PTAED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT +AK +G+VAAPTAGLHF+ L+ RL G++ VTLHVG GTF V+VED
Sbjct: 169 KERYQTIFAKNEGAVAAPTAGLHFSRELMKRLELKGVEFAEVTLHVGLGTFRQVEVEDLT 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I A +N RI +VGTT +R +E+A + + P + +T+ F
Sbjct: 229 KHKMDSEQFIIAEKDANIVNKAIEEKRRICAVGTTVMRAVESAVSASRTLKPMNDWTSKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH P+STLLM+VSAF G E Y+ A+ YRFYSYGD L+
Sbjct: 289 IFPPYDFSIANSMITNFHTPESTLLMMVSAFGGYEHVMHAYEVAVKEKYRFYSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|159028722|emb|CAO88194.1| queA [Microcystis aeruginosa PCC 7806]
Length = 365
Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats.
Identities = 143/365 (39%), Positives = 199/365 (54%), Gaps = 22/365 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +D+ LPP IA P PRDS+RL+VV S L I DLP +L D +V N
Sbjct: 7 LSSYDYHLPPELIAQNPAEPRDSSRLLVVDSPNSHNLAI----FRDLPTWLEPGDLLVLN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+VI A+L G + + L + W +P K K G + F+ + G
Sbjct: 63 DTRVIPARLFGRKV-----TGAPVEILLLEEQDDHRWLSLVKPGKRFKVGSEVLFYPKTG 117
Query: 123 QSRLE-----ATVIDKW--NTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
++ + A VID+ +G +L G + G IP PPY+ +
Sbjct: 118 RTEDKEKLWLAKVIDRDLNTSGRLLEFQRRPGRSFWDMLEEYGHIPFPPYVTESEAEED- 176
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
YQT Y QGSVAAPTAGLHFT L +L GI ++TLHVG GTF PV+VE+
Sbjct: 177 ---RYQTVYGNKQGSVAAPTAGLHFTPELFHKLAQKGIDTTYITLHVGVGTFRPVEVENI 233
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFT 293
+H+MH E I A TA+ + K+RGGR+++VGTT R LE A T+ + + G T
Sbjct: 234 TEHLMHREFLEISAETAEKIAQTKARGGRVIAVGTTVARALEGAIKETKSDKLTAFQGKT 293
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
N+F+ PGY++R +D +++NFHLPKS+L+MLVSA G E +YQ AI +RFYS+GD
Sbjct: 294 NLFVYPGYQWRVIDGMITNFHLPKSSLMMLVSALVGRERLLALYQAAIQERFRFYSFGDA 353
Query: 354 SLLFQ 358
L+
Sbjct: 354 MLILP 358
>gi|332174857|gb|AEE24111.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Glaciecola
agarilytica 4H-3-7+YE-5]
Length = 350
Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats.
Identities = 134/364 (36%), Positives = 202/364 (55%), Gaps = 23/364 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V EF FDLP + IA P R ++RLM + +S +D+ +N D ++
Sbjct: 1 MKVSEFQFDLPEALIARYPTKERTASRLMHL-----AKTGLSHLQFTDVVDLINPGDLLI 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + V + + R SK K+G L
Sbjct: 56 FNNTRVIPARLLGQKAS-----GGKVEVLIERIVDEHHVLAHVRASKSPKEGSQLLL--- 107
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++E ++ + + + + ++ + + G +PLPPYI RP + D Y
Sbjct: 108 --EDKVEMEMVGRQDA--LFKLKLLNPEPILEILEQYGHMPLPPYI--DRPDEESDKERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF +L +L G+ FVTLHVGAGTF PV+V++ +H M
Sbjct: 162 QTVYNEKPGAVAAPTAGLHFDDAILQKLKDKGVSTEFVTLHVGAGTFQPVRVDNILEHQM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET---ATTEDG-IINPWSGFTNIF 296
HSE + A+ K+ G R+++VGTTS+R LE+ A + +G + P+ T+IF
Sbjct: 222 HSEYAEVPQNVIDAIAKTKAAGKRVIAVGTTSVRSLESAAKAASSNGTELAPFFSDTDIF 281
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+F+ VD +++NFHL +STL+MLVSAF G E YQ AI+ YRF+SYGD +
Sbjct: 282 IYPGYQFQVVDAMLTNFHLSESTLIMLVSAFAGKENVMSAYQEAIAQQYRFFSYGDAMFI 341
Query: 357 FQKR 360
+ +
Sbjct: 342 EKNQ 345
>gi|209527446|ref|ZP_03275951.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Arthrospira
maxima CS-328]
gi|209492119|gb|EDZ92469.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Arthrospira
maxima CS-328]
Length = 375
Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats.
Identities = 158/366 (43%), Positives = 202/366 (55%), Gaps = 26/366 (7%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
+D++LPP RIA PV PRDS+RL+VV P L DLP L D ++ NNT+
Sbjct: 18 YDYELPPDRIAQNPVIPRDSSRLLVVD----SPPSHQHRLFRDLPDLLQPEDLLILNNTR 73
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSR 125
V+ A+L G + I L +PN W +P K K GD L F S+ G+
Sbjct: 74 VLPARLYGRKSTS-----AAIEILLLQEQAPNCWLALVKPGKRFKIGDRLEFPSKSGREI 128
Query: 126 LEATVID-KWNTGEILLVFSIS-GIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTT 183
L ATVID TG LL F + G L + G IP PPY+ + + + YQT
Sbjct: 129 LYATVIDTNPGTGGRLLKFEVPQGQSLVSILDQFGEIPFPPYVTDSQAVAEQ----YQTI 184
Query: 184 YAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSE 243
Y G+VAAPTAGLHFT L RL I F+TLHVG GTF PV+VED H MH+E
Sbjct: 185 YGTRPGAVAAPTAGLHFTEELFQRLSDHHIDHAFLTLHVGLGTFRPVEVEDITTHQMHAE 244
Query: 244 IGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE----DGIINPWSGFTNIFITP 299
+ T +N ++RGGRI++VGTT +R LE DG I P+ G N+FI P
Sbjct: 245 WVELRPETVDKINQTRARGGRIIAVGTTVVRTLEGIAAAQNSLDGCIQPYCGEINLFIYP 304
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISH-------AYRFYSYGD 352
GYR+R +D L++NFHLP+S+LLMLVSA G E K+YQ A+ YRFYS+GD
Sbjct: 305 GYRWRVIDGLITNFHLPRSSLLMLVSALIGRERLMKLYQDALEQPPNDFGNRYRFYSFGD 364
Query: 353 TSLLFQ 358
L+
Sbjct: 365 AMLILP 370
>gi|330998873|ref|ZP_08322600.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Parasutterella excrementihominis YIT 11859]
gi|329576087|gb|EGG57606.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Parasutterella excrementihominis YIT 11859]
Length = 354
Score = 437 bits (1125), Expect = e-120, Method: Composition-based stats.
Identities = 147/360 (40%), Positives = 197/360 (54%), Gaps = 17/360 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDF+LP S IA P+ R ++RL+ V P+ S + D D+ L D +VF
Sbjct: 7 HLSDFDFELPESLIAQYPLKDRAASRLLHVKPDGS----VEDLHFRDILNLLKPGDLLVF 62
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNTKVI A+LNG + R SK K G IL+F +
Sbjct: 63 NNTKVIKARLNGKKE-----TGGVFEAMTERVTGTYEAISMMRASKAAKPGTILYFDHPE 117
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G+ A V+ + L + + G +PLPPYI + D YQ
Sbjct: 118 GKEPARAEVLGREGEFFRLKFDH----PVLEVLDEYGKVPLPPYIQH--AAEKSDESRYQ 171
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YAK G+VAAPTAGLHFT LL ++ G + FVTLHVGAGTF PV+VE+ +H+MH
Sbjct: 172 TVYAKYPGAVAAPTAGLHFTDELLQQIRDKGCEEVFVTLHVGAGTFQPVRVENLSEHVMH 231
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED--GIINPWSGFTNIFITP 299
SE I A+ +N K+ G R+V VGTTSLR +E + +++ G + S T +FI P
Sbjct: 232 SEWYSISPEAAEKINKAKAEGRRVVCVGTTSLRTVEASASQNPEGKVRAESADTRLFIKP 291
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY F+ D +++NFHLPKSTL+MLVSA CG +E Y+HA+ YRF+SYGD L QK
Sbjct: 292 GYEFKVCDAMVTNFHLPKSTLVMLVSALCGRDEILAAYKHAVDEKYRFFSYGDACFLEQK 351
>gi|85373945|ref|YP_458007.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Erythrobacter litoralis HTCC2594]
gi|122544578|sp|Q2NAT1|QUEA_ERYLH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|84787028|gb|ABC63210.1| S-adenosylmethionine:tRNA-ribosyltransferase [Erythrobacter
litoralis HTCC2594]
Length = 347
Score = 437 bits (1125), Expect = e-120, Method: Composition-based stats.
Identities = 188/359 (52%), Positives = 232/359 (64%), Gaps = 16/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP IALRP PRDSARL+V + I D +V DLP L D +V
Sbjct: 1 MRVDLFDFELPQELIALRPAVPRDSARLLV----AAGAGAIDDRIVRDLPQLLMPGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI AQL G R E + TLH R+ W + R +K + GD + F +
Sbjct: 57 FNDTRVIPAQLTGKR------GEATVGVTLHKRLDLRRWQAFVRNAKRLAPGDTVDFGND 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A V D+ + G F +E + GT+PLPPYIA KR D RD DY
Sbjct: 111 -----VSADVEDRADDGSFTFAFRGD-EPVEVLLDRAGTMPLPPYIAGKRATDERDRDDY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTA LHFTS L++ L G+ +TLHVGAGTF+PVK +DTDDH M
Sbjct: 165 QTMFAREDGAVAAPTAALHFTSELIAALDERGVARQTLTLHVGAGTFLPVKADDTDDHRM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE G I+ TA LN+ KSRGGRI++VGTTSLRLLE+AT EDG+I ++G T+IFITPG
Sbjct: 225 HSEWGRIEHDTADRLNAAKSRGGRIIAVGTTSLRLLESATGEDGVIRTFAGDTDIFITPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRFRAVD LM+NFHLPKSTL+MLVSA G E +Y HAI+ YRFYSYGD+SLL +
Sbjct: 285 YRFRAVDGLMTNFHLPKSTLMMLVSALMGRERMMDIYAHAIAQRYRFYSYGDSSLLIPE 343
>gi|187931500|ref|YP_001891484.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. mediasiatica FSC147]
gi|226713839|sp|B2SG47|QUEA_FRATM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|187712409|gb|ACD30706.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase
[Francisella tularensis subsp. mediasiatica FSC147]
Length = 338
Score = 437 bits (1125), Expect = e-120, Method: Composition-based stats.
Identities = 136/357 (38%), Positives = 210/357 (58%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LP IA P+ RD++RL+ ++ I+D+ +D F+N D +V
Sbjct: 1 MKTDDFDYKLPEELIASYPLENRDASRLLKLNKQTG---EIADYKFTDFIDFINPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV+ A+L G + ++ + +P + + + ++ G ++ S
Sbjct: 58 FNNSKVMLARLYGSKT-----TGAKLEYLIERIKNPKLFETHIKANRSPAIGSEIYVEST 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
A V+DK G + L+ ++ + + G IPLPPY+ KR + D Y
Sbjct: 113 ------HAKVLDK--DGGMYLLEIQGDKDIYQLMEEFGHIPLPPYM--KRDDEEFDAERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GSVAAPTAGLHF+ L+ ++ G+ + ++TLHVG+GTF PV+V+D + H M
Sbjct: 163 QTVYAQDLGSVAAPTAGLHFSKELMQQIKDKGVDIAYITLHVGSGTFKPVQVDDVESHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E+ + Q + K GGR++++GTTS+R LETA ++G I P+ G T+IF+ PG
Sbjct: 223 HAEVISVPVEVCQKIRQTKENGGRVIAIGTTSVRSLETA-GQNGQIEPYQGETDIFLYPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F VD +++NFHLPKSTL+MLVSAF E+ K Y+HAI+ YRF+SYGD +F
Sbjct: 282 KKFNVVDAMITNFHLPKSTLIMLVSAFADKEKIIKAYEHAIAERYRFFSYGDAMFIF 338
>gi|188996184|ref|YP_001930435.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Sulfurihydrogenibium sp. YO3AOP1]
gi|226713853|sp|B2V7F8|QUEA_SULSY RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|188931251|gb|ACD65881.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Sulfurihydrogenibium sp. YO3AOP1]
Length = 336
Score = 437 bits (1125), Expect = e-120, Method: Composition-based stats.
Identities = 135/356 (37%), Positives = 186/356 (52%), Gaps = 21/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+ LP IA P PRDS RLMV++ I + D+ +L D +V
Sbjct: 1 MKLSDFDYHLPKELIAKYPAQPRDSCRLMVLNRKDKT---IEHRIFRDVIDYLKPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L G + + I L + N W + + +KK +
Sbjct: 58 LNNTKVIPARLIGKK----EKTNANIEVFLLRPIEDNIWETLIKNVRRLKKNQKIIISDD 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ K + I+ I +++ + G +PLPPYI +R + +D Y
Sbjct: 114 -----FYVEFLSKDDEKAIV---KIHSKDIKSDLEKYGHVPLPPYI--EREDEEKDKDYY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A +GSVA+PTAGLHFT LL ++ G+ + ++TLHVG GTF PVK ED H M
Sbjct: 164 QTVFADKEGSVASPTAGLHFTKELLEKIKEKGVNIAYITLHVGLGTFKPVKTEDITKHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I T + + K +V+VGTT +R LET G GFT+IFI P
Sbjct: 224 HEEYFTIPKETLEMIKKTKENKKSLVAVGTTVVRALETY----GKFGKTEGFTDIFIYPP 279
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+ VD L++NFHLPKSTLLMLVSAF + + Y A+ YRF+SYGD L+
Sbjct: 280 YEFKIVDKLITNFHLPKSTLLMLVSAFADRDFILRAYNGAVKEKYRFFSYGDAMLI 335
>gi|150019970|ref|YP_001305324.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Thermosipho
melanesiensis BI429]
gi|166218753|sp|A6LJ38|QUEA_THEM4 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|149792491|gb|ABR29939.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Thermosipho melanesiensis BI429]
Length = 334
Score = 437 bits (1125), Expect = e-120, Method: Composition-based stats.
Identities = 139/357 (38%), Positives = 203/357 (56%), Gaps = 23/357 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+ LP IA +PV PRD++RLMV++ I + ++ +L+ D +V
Sbjct: 1 MKLSDFDYYLPEELIAQKPVEPRDASRLMVLNRK---EKKIEHKIFRNIVEYLHEGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKVI A++ G + +I L ++S N W +P +KKG ++F +
Sbjct: 58 RNVTKVIPARIYGRKE-----TGAKIEVLLLEKISENVWEALVKPGSKVKKGTKIYFDDE 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+D + G +L F+I+ E ++ +G PLPPY+ K + Y
Sbjct: 113 S-----YCVCLDWGDEGSRILEFNIT----EEELFKLGEAPLPPYVKNKVS-----FERY 158
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ GSVAAPTAGLHFT +LL +L G++ + LHVG GTF PVKVE+ +H M
Sbjct: 159 QTIYSRETGSVAAPTAGLHFTEDLLKKLEEKGVEFADLVLHVGLGTFRPVKVENITEHKM 218
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ T + + K GGRIV+VGTTS+R LET + + G T+IFI P
Sbjct: 219 HSESYYVPNETVKKIFETKKNGGRIVAVGTTSVRTLETIVRLERK-ESYHGKTDIFIYPP 277
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+ VD L++NFHLPKSTLLMLVSAF G E + Y A+ YRF+S+G+ ++
Sbjct: 278 FEFKLVDALITNFHLPKSTLLMLVSAFAGREFIMEAYNIAVKMKYRFFSFGNACFIY 334
>gi|85058623|ref|YP_454325.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Sodalis
glossinidius str. 'morsitans']
gi|123519936|sp|Q2NVA5|QUEA_SODGM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|84779143|dbj|BAE73920.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Sodalis
glossinidius str. 'morsitans']
Length = 353
Score = 437 bits (1125), Expect = e-120, Method: Composition-based stats.
Identities = 139/359 (38%), Positives = 202/359 (56%), Gaps = 16/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F LP + IA P R + RL+ + ++ + +DL L D +V
Sbjct: 1 MRVADFSFALPDNLIARYPQAQRSACRLLSLDGQTGA---LAHQVFTDLLEELAPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKVS-----GGKIEVLVERVLDDKRVLAHVRASKAPKPGSALLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D + AT++ + + + + ++ ++ G +PLPPYI RP D D Y
Sbjct: 113 D---SIAATMVARHDA--LFELRFDDARDVLTLLNDAGHMPLPPYI--DRPDDVADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + GSVAAPTAGLHF LL+ L + G+++ FVTLHVGAGTF PV+V+ + H M
Sbjct: 166 QTVYGERPGSVAAPTAGLHFDEPLLAALRAKGVEMAFVTLHVGAGTFQPVRVDQIEHHQM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
HSE + A+ + K+RG R+V+VGTT++R LE+A + + P+ G T+IFI
Sbjct: 226 HSEYAEVPQEVVDAVLACKARGNRVVAVGTTAVRSLESAAAAGEQALTPFFGDTSIFIYT 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
GY+FR VD+L++NFHLP+STL+MLVSAF G T Y+ A++ AYRF+SYGD + +
Sbjct: 286 GYQFRVVDVLITNFHLPESTLIMLVSAFAGYRHTLAAYREAVAQAYRFFSYGDAMFITR 344
>gi|307153956|ref|YP_003889340.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Cyanothece
sp. PCC 7822]
gi|306984184|gb|ADN16065.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Cyanothece
sp. PCC 7822]
Length = 365
Score = 437 bits (1125), Expect = e-120, Method: Composition-based stats.
Identities = 147/369 (39%), Positives = 202/369 (54%), Gaps = 25/369 (6%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D++LP IA PV PRD +RL++V P + + +LP +L D +VF
Sbjct: 6 LLSSYDYELPLDLIAQNPVVPRDMSRLLIVD----TPASHTHSIFRELPKWLLPGDLLVF 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNT+VI A+L G + I L S W +P K K G L F+
Sbjct: 62 NNTRVIPARLYGCK-----STGAPIEILLLEPKSNGCWLALVKPGKRFKVGSELWFYPPS 116
Query: 122 GQSR-----LEATVIDKWN-TGEILLVFSISGI-ELERQISLVGTIPLPPYIARKRPIDA 174
+ L+A V+D+ TG +L F + +G +PLPPYI +
Sbjct: 117 ANPKNPEIFLKAKVLDRDEATGGRILQFLWDNDQSFWELLEKIGQVPLPPYITSSDAKSS 176
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
+ YQT YAK G+VAAPTAGLHFT LL L SIGI ++TLHVG GTF PV+ ED
Sbjct: 177 Q----YQTVYAKELGAVAAPTAGLHFTDELLKSLQSIGIDQAWITLHVGVGTFRPVEKED 232
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-----INPW 289
H MH+E + + T + K+RGGR+++VGTT +R LE A E + P+
Sbjct: 233 ITQHQMHTEWLEVPSATVTKIQETKARGGRVIAVGTTVVRALEGAAKETQAPESEYLLPF 292
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
G T++FI PGYR+R +D +++NFHLPKS+LLMLVSA G E ++Y AI YRFYS
Sbjct: 293 QGRTDLFIYPGYRWRVIDGMITNFHLPKSSLLMLVSALIGRERLLELYHQAIQEKYRFYS 352
Query: 350 YGDTSLLFQ 358
+GD L+
Sbjct: 353 FGDAMLILP 361
>gi|126658466|ref|ZP_01729614.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cyanothece
sp. CCY0110]
gi|126620208|gb|EAZ90929.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cyanothece
sp. CCY0110]
Length = 360
Score = 437 bits (1125), Expect = e-120, Method: Composition-based stats.
Identities = 143/368 (38%), Positives = 207/368 (56%), Gaps = 26/368 (7%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D+ LPP IA P+ PRD +RL+V++ + + DLP +L+ D +VF
Sbjct: 6 LLSSYDYYLPPELIAQNPMTPRDESRLLVIN----SLRTHTHSIFRDLPEWLSPGDLLVF 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNT+VI A+L G + + L P W +P K K G ++F+ +
Sbjct: 62 NNTRVIPARLYGKKA-----TGAPVEILLLEEKEPLCWLALVKPGKRFKIGSEIYFYLDN 116
Query: 122 GQSR----LEATVIDKWNT-GEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDAR 175
L ATV+D+ G LL F ++ ++ ++I +G IP PPY+ + ++
Sbjct: 117 NDCSQDNFLVATVVDRDEETGGRLLKFKVNSLDVFWKKIEELGQIPFPPYVTESKAAPSQ 176
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
YQT YA+ G+VAAPTAGLHFT LL L GI ++TLHVG GTF PV +E+
Sbjct: 177 ----YQTIYAQKPGAVAAPTAGLHFTDKLLENLQQKGINQAYITLHVGLGTFRPVDIENI 232
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT------TEDGIINPW 289
+H MH E + T + + K+ GGR+++VGTT +R LE A + G+I P+
Sbjct: 233 KEHKMHQEWIELPEITVEKIKETKANGGRVIAVGTTVVRTLEGAAKAAEMEGKQGLI-PY 291
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
T+IFI PGY +R +D L++NFHLPKS+LLMLVSA G E ++YQ AI YRFYS
Sbjct: 292 RDKTDIFIYPGYSWRVIDGLITNFHLPKSSLLMLVSALIGRERLLELYQIAIEEKYRFYS 351
Query: 350 YGDTSLLF 357
+GD L+
Sbjct: 352 FGDGMLIL 359
>gi|67923312|ref|ZP_00516795.1| Queuosine biosynthesis protein [Crocosphaera watsonii WH 8501]
gi|67854835|gb|EAM50111.1| Queuosine biosynthesis protein [Crocosphaera watsonii WH 8501]
Length = 361
Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats.
Identities = 139/364 (38%), Positives = 198/364 (54%), Gaps = 21/364 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D+ LP IA PV PRD++RL+V++ P + DLP +L D +VF
Sbjct: 6 LLSSYDYYLPQELIAQNPVIPRDNSRLLVIN----SPENHIHSVFRDLPQWLLPGDLLVF 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNT+VI A+L G + + L P W +P K K G ++F D
Sbjct: 62 NNTRVIPARLYGAK-----STGAPVEILLLEEKEPFCWLALVKPGKRFKIGSEIYFRLDD 116
Query: 122 GQSR-LEATVIDKWNT-GEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYV 178
+ L ATV+D+ G LL F + ++ ++I +G IP PPY+ ++
Sbjct: 117 DEDNFLVATVVDRDEETGGRLLKFQVDSLDLFWQKIEEIGQIPFPPYVTESDAKPSQ--- 173
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YA+ G+VAAPTAGLHFT LL L GI ++TLHVG GTF PV +++ +H
Sbjct: 174 -YQTIYAQKPGAVAAPTAGLHFTEELLENLQQKGINQAYITLHVGLGTFRPVDIDNIKEH 232
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-----TEDGIINPWSGFT 293
MH E + + + K+ GGR+++VGTT +R LE + + G T
Sbjct: 233 KMHQEWIEVPEIIVEKIKETKANGGRVIAVGTTVVRALEGTAKATEMAGKQELMEFRGKT 292
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PGY + +D L++NFHLPKS+LLMLVSA G E ++YQ AI YRFYS+GD
Sbjct: 293 DIFIYPGYSWCVIDGLITNFHLPKSSLLMLVSALIGRERLLELYQIAIEEKYRFYSFGDG 352
Query: 354 SLLF 357
L+
Sbjct: 353 MLIL 356
>gi|254373176|ref|ZP_04988665.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. novicida GA99-3549]
gi|151570903|gb|EDN36557.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
novicida GA99-3549]
Length = 340
Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats.
Identities = 137/357 (38%), Positives = 210/357 (58%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LP IA P+ RD++RL+ ++ I+DH +D F+N D +V
Sbjct: 3 MKTDDFDYKLPEELIASYPLENRDASRLLKLNKQTG---EIADHKFTDFIDFINPGDLLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV+ A+L G + ++ + +P + + + ++ G ++
Sbjct: 60 FNNSKVMLARLYGSKT-----TGAKLEYLIERIKTPKLFETHIKANRSPAIGSEIYVEDT 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
A V+DK G + L+ ++ R + G IPLPPY+ KR + D Y
Sbjct: 115 ------LAKVLDK--DGGMYLLEIQGDKDIYRLMEEFGHIPLPPYM--KRDDEEFDAERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GSVAAPTAGLHF+ L+ ++ G+ + ++TLHVG+GTF PV+V+D + H M
Sbjct: 165 QTVYAQDLGSVAAPTAGLHFSKELMQQIKDKGVDIAYITLHVGSGTFKPVQVDDVESHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E+ + Q + K+ GGR++++GTTS+R LETA ++G I P+ G T+IF+ PG
Sbjct: 225 HAEVISVPVEVCQKIRQTKANGGRVIAIGTTSVRSLETA-GQNGQIEPYQGETDIFLYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F VD +++NFHLPKSTL+MLVSAF E+ K Y+HAI+ YRF+SYGD +F
Sbjct: 284 KKFNVVDAMITNFHLPKSTLIMLVSAFADKEKIIKAYEHAIAERYRFFSYGDAMFIF 340
>gi|126735609|ref|ZP_01751354.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseobacter
sp. CCS2]
gi|126714796|gb|EBA11662.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseobacter
sp. CCS2]
Length = 350
Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats.
Identities = 165/362 (45%), Positives = 230/362 (63%), Gaps = 14/362 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EFDFDLP S IA RP PR SARL++ I D +V+ LP L D ++
Sbjct: 1 MKLSEFDFDLPDSLIATRPARPRSSARLLLAQGAT-----IEDRIVNQLPDILQPGDRLI 55
Query: 61 FNNTKVITAQLNGVRFCHINRRE--KEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+L G+R E ++ TL + SWS +P K ++ G+++ F
Sbjct: 56 LNDTKVIPARLFGLRHRSGEAGETAAKMDVTLLEPRADGSWSALIKPLKKVRDGEVIVFS 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
LEA V + + G+ L F++ G + + ++ VG +PLPPYIA KR D D
Sbjct: 116 DD-----LEAEVTGRGD-GQGYLAFNLKGDDFDAALNAVGAMPLPPYIAGKRSADDADKT 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LL+ L + G++ VTLHVGAGTF+PVKV+D DH
Sbjct: 170 DYQTYWARNSGAVAAPTASLHFDGPLLAALAARGVQFTHVTLHVGAGTFLPVKVDDVRDH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A A +N+ K+ G R++ VGTT+LRL+E+A + G++ PW+G T+IFIT
Sbjct: 230 KMHAEWGEVTADAAAEINATKAAGHRVIPVGTTALRLIESAA-QRGVMQPWTGPTDIFIT 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG++F+ D LM+NFHLPKSTL+MLVSA G + + +Y HAI+ YRF+SYGD+SLL
Sbjct: 289 PGFQFQMADGLMTNFHLPKSTLMMLVSALMGTDTIRAIYAHAIAQNYRFFSYGDSSLLLP 348
Query: 359 KR 360
+
Sbjct: 349 HK 350
>gi|298208116|ref|YP_003716295.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Croceibacter atlanticus HTCC2559]
gi|83848037|gb|EAP85907.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Croceibacter atlanticus HTCC2559]
Length = 351
Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats.
Identities = 145/361 (40%), Positives = 199/361 (55%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F FDLP + +A RP RD ARLMV++ I DL + +D +V
Sbjct: 3 MKLSNFGFDLPENLLADRPAENRDEARLMVLNRK---EQTIEHKQFKDLIDYFEPDDVLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + I L ++P + W V P++ I+ G+ L+F
Sbjct: 60 LNNTKVFPARLYGNK----EKTGARIEVFLLRELNPETRLWDVLVDPARKIRIGNKLYFG 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
+ L A VID + L F G E +++ +G PLP YI KR ++ D
Sbjct: 116 DDE---SLVAEVIDNTTSRGRTLRFLYDGSYEEFRKKLKDLGETPLPKYI--KREVEPDD 170
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT +AK +G+VAAPTAGLHF+ +LL RL GI VTLHVG GTF PV+VED
Sbjct: 171 AERYQTIFAKEEGAVAAPTAGLHFSKHLLKRLEIKGINFAEVTLHVGLGTFNPVEVEDLS 230
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE +I P + +N S RI +VGTT +R LE+A + G +N + G+TN F
Sbjct: 231 KHKMDSEEAYIAKPATEVVNKAISEKRRICAVGTTVMRTLESAVSSSGTLNEFGGWTNKF 290
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH PKSTLLM+ +AF G E T++ Y A+ Y FY+YGD L+
Sbjct: 291 IFPPYDFSIANCMVTNFHTPKSTLLMMTAAFAGHEFTQRAYAEAVKEKYNFYTYGDAMLI 350
Query: 357 F 357
Sbjct: 351 I 351
>gi|255535319|ref|YP_003095690.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Flavobacteriaceae bacterium 3519-10]
gi|255341515|gb|ACU07628.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Flavobacteriaceae bacterium 3519-10]
Length = 349
Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats.
Identities = 136/361 (37%), Positives = 194/361 (53%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F+F LP +A P RD A+LMV+ I D+ + + D +
Sbjct: 1 MKTSDFNFHLPEELLAEHPSEHRDDAKLMVLDRKTQT---IEHKTFKDVVDYFDEKDLFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
FNNTKV A+L G + + +I L + + W V P++ I+ G+ L F
Sbjct: 58 FNNTKVFPARLYGNK----EKTGAKIEVFLLRELDKETRVWDVLVDPARKIRIGNKLFFT 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
+ L A VID + L F G E ++ +G PLP YI KR ++ D
Sbjct: 114 EDE---SLVAEVIDNTTSRGRTLRFLYDGSYEEFRTKLKELGETPLPKYI--KRDVEPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ +L+ +L GI VTLHVG GTF P++VED
Sbjct: 169 AERYQTIYAKHEGAVAAPTAGLHFSRHLMKKLEIKGIDFAEVTLHVGLGTFNPIEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE ID A +N + R+ +VGTT++R LET+ + + I P+ G+TN F
Sbjct: 229 KHKMESEEAIIDQLNADIINKAVAEQRRVCAVGTTTMRALETSVSSNKKIGPYHGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P + F + +++NFH PKSTLLM+++AF G + Y+ AI + Y+FYSYGD L+
Sbjct: 289 IFPPHDFGVANAMITNFHTPKSTLLMMIAAFAGKDFLMHAYEEAIKNEYKFYSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 L 349
>gi|118497819|ref|YP_898869.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. novicida U112]
gi|194323792|ref|ZP_03057568.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. novicida FTE]
gi|171472965|sp|A0Q7A0|QUEA_FRATN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|118423725|gb|ABK90115.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase
[Francisella novicida U112]
gi|194322156|gb|EDX19638.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. novicida FTE]
Length = 338
Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats.
Identities = 134/357 (37%), Positives = 210/357 (58%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LP IA P+ RD++RL+ ++ I+DH +D F++ D +V
Sbjct: 1 MKTDDFDYKLPEELIASYPLENRDASRLLKLNKQTG---EIADHKFTDFIDFISPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV+ A+L G + ++ + +P + + + ++ G ++
Sbjct: 58 FNNSKVMLARLYGSKT-----TGAKLEYLIERIKNPKLFETHIKANRSPAIGSEIYVEDT 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
A V+DK G + L+ ++ + + G IPLPPY+ KR + D Y
Sbjct: 113 ------LAKVLDK--DGGMYLLEIQGDKDIYQLMEEFGHIPLPPYM--KRDDEEFDAERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GSVAAPTAGLHF+ L+ ++ + G+ + ++TLHVG+GTF PV+V+D + H M
Sbjct: 163 QTVYAQDLGSVAAPTAGLHFSKELMQQIKNKGVDIAYITLHVGSGTFKPVQVDDVESHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E+ + Q + K GGR++++GTTS+R LETA ++G I P+ G T+IF+ PG
Sbjct: 223 HAEVISVPVEVCQKIRQTKENGGRVIAIGTTSVRSLETA-GQNGQIEPYQGETDIFLYPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F VD +++NFHLPKSTL+MLVSAF E+ K Y+HAI+ YRF+SYGD ++
Sbjct: 282 KKFNVVDAMITNFHLPKSTLIMLVSAFADKEKIIKAYEHAIAERYRFFSYGDAMFIY 338
>gi|189425071|ref|YP_001952248.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Geobacter
lovleyi SZ]
gi|238692103|sp|B3E2S1|QUEA_GEOLS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|189421330|gb|ACD95728.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Geobacter
lovleyi SZ]
Length = 341
Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats.
Identities = 146/356 (41%), Positives = 201/356 (56%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+VKE+ F LP IA P RD +RLMV+ + I+ S + +L +D +V
Sbjct: 1 MLVKEYSFTLPDELIARYPANQRDGSRLMVLDRQTAARSEIA---FSQIVEWLRPDDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + I L V W R SK + G +
Sbjct: 58 LNDTKVIPARLFGQKE-----TGGRIELFLVEPVGDACWRCLLRSSKRCRTGQSIRLAEG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A V+++ + L+ F S + E + VG +P+PPY+ R+ + D V Y
Sbjct: 113 -----VTAEVVEQLGEQDWLIRFHGS-DDFESWLQRVGQMPIPPYLNRE--SEELDRVRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA G+VAAPTAGLHFT LL R+ GI++ VTLHVG GTF PV+VE DH++
Sbjct: 165 QTVYASESGAVAAPTAGLHFTQELLERIQEKGIRLARVTLHVGLGTFQPVRVERVQDHVI 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + + TA A+ ++RGGR+++VGTT+ R LE A G + G +IFI PG
Sbjct: 225 HRERYRLPSETAAAVTETRARGGRVIAVGTTACRTLEYAADNAGHLQAGQGEADIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF+ VD L++NFHLP+STLLMLVSAF G E Y+ A++ +RFYSYGD L+
Sbjct: 285 YRFKVVDALLTNFHLPESTLLMLVSAFGGKEFILSAYEAAVNRQFRFYSYGDAMLI 340
>gi|221064800|ref|ZP_03540905.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Comamonas
testosteroni KF-1]
gi|220709823|gb|EED65191.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Comamonas
testosteroni KF-1]
Length = 362
Score = 436 bits (1123), Expect = e-120, Method: Composition-based stats.
Identities = 151/368 (41%), Positives = 207/368 (56%), Gaps = 23/368 (6%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDFDLP S IA P R ++RL+ L +D + +LP L D +VF
Sbjct: 9 TLSDFDFDLPESLIAQHPTAVRSASRLL-----DGRSLPATDRIFRELPDLLQPGDLLVF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKVI A++ G + +I + + N + R SK G +H
Sbjct: 64 NDTKVIKARVFGEKAS-----GGKIELLVERVLQNNEVVAHMRVSKKPLPGAKIHLCGGL 118
Query: 122 GQSRLEATVIDKW-NTGEILLVFSISGIELE---RQISLVGTIPLPPYIAR-----KRPI 172
EAT++ +W + L S G + E + G +PLPPYI R P
Sbjct: 119 RNGGFEATLLGRWPDENGPLFHLSFKGNQGESPYELLEQFGHLPLPPYIERQQNAEHDPD 178
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+ D YQT +A G+VAAPTA LHF +L+ L + G++ VTLHVGAGTF PVK
Sbjct: 179 EKEDSERYQTVFAAHPGAVAAPTAALHFDETVLAALQAKGVERASVTLHVGAGTFQPVKT 238
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
E+ DH MHSE I PT A+ + RGGRI++VGTT++R LE+ I +G
Sbjct: 239 ENLADHTMHSEWYDIPLPTLAAMERCRQRGGRIIAVGTTTVRTLESWAKYGNI----TGD 294
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFITPG++++ VD+L++NFHLPKSTL+MLVSAF G E MYQHAI+ YRF+SYGD
Sbjct: 295 TSIFITPGFQYQVVDMLITNFHLPKSTLMMLVSAFAGYEHIMAMYQHAIAQHYRFFSYGD 354
Query: 353 TSLLFQKR 360
+ LL ++R
Sbjct: 355 SMLLERQR 362
>gi|309781308|ref|ZP_07676044.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ralstonia
sp. 5_7_47FAA]
gi|308919721|gb|EFP65382.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ralstonia
sp. 5_7_47FAA]
Length = 356
Score = 436 bits (1123), Expect = e-120, Method: Composition-based stats.
Identities = 151/358 (42%), Positives = 211/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FDFDLPP IA + R ++RL+ V + D +DL +L D +V
Sbjct: 2 LTLSDFDFDLPPELIAQTALPDRTASRLLAVRR-AGDAVHFEDRQFADLVDYLRPGDLLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+ G + ++ + + ++ R SK +G L
Sbjct: 61 FNDTRVIKARFFGQKAS-----GGKVEVLVERLLDEHTVLAQIRSSKSPVEGTTLRLADA 115
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ TV + L F ++L I G +PLPPYI ++ D Y
Sbjct: 116 -----FDVTVGPRAEPF-FTLRFPQPALDL---IEQYGRLPLPPYIEHD--PNSFDETRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF L ++L ++GI+ F+TLHVGAGTF PV+VE+ +H M
Sbjct: 165 QTVYARNPGAVAAPTAGLHFDDALFAKLDAMGIQRGFLTLHVGAGTFQPVRVENIAEHRM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I A+A+ + ++ GGRI++VGTTS+R LE+A DG +N SG T+IFITPG
Sbjct: 225 HSEWYEITPELAEAIRATRAAGGRIIAVGTTSMRALESAAQPDGTLNACSGETDIFITPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRFRAVD+L++NFHLPKSTLLMLVSAF G+ ++ YQHAI+ YRF+SYGD LL +
Sbjct: 285 YRFRAVDLLVTNFHLPKSTLLMLVSAFAGMSAIREAYQHAIAQRYRFFSYGDAMLLTR 342
>gi|172035354|ref|YP_001801855.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cyanothece
sp. ATCC 51142]
gi|171696808|gb|ACB49789.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cyanothece
sp. ATCC 51142]
Length = 361
Score = 436 bits (1123), Expect = e-120, Method: Composition-based stats.
Identities = 143/367 (38%), Positives = 199/367 (54%), Gaps = 24/367 (6%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D+DLPP IA P+ PRD +RL+V++ P + DLP +L D +VF
Sbjct: 6 LLSSYDYDLPPELIAQNPMIPRDHSRLLVIN----SPTTHIHSVFRDLPKWLLPGDLLVF 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNT+VI A+L G + + L P W +P K K G +HF
Sbjct: 62 NNTRVIPARLYGKKT-----TGAPVEILLLEEKEPFCWLALVKPGKRFKIGSEIHFPLDH 116
Query: 122 GQSR----LEATVIDKWNT-GEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDAR 175
+ L ATV+D+ G LL F++ ++ ++I +G IP PPY+
Sbjct: 117 NDDKEDMFLAATVLDRDEETGGRLLKFNVDSLDLFWKKIEEIGQIPFPPYVTES----EA 172
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT YA+ G+VAAPTAGLHFT LL L I ++TLHVG GTF PV +E+
Sbjct: 173 DSSQYQTIYAQKPGAVAAPTAGLHFTDELLDNLQHKRINQAYITLHVGLGTFRPVDMENI 232
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-----DGIINPWS 290
+H MH E + T + + K+ GGR+++VGTT +R LE A + +
Sbjct: 233 KEHKMHQEWIEVPDVTVEKIKETKANGGRVIAVGTTVVRALEGAAKAAEMEGKKDLKAFR 292
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G T+IFI PGY +R +D +++NFHLPKS+LLMLVSA G E +YQ AI YRFYS+
Sbjct: 293 GKTDIFIYPGYSWRVIDGMITNFHLPKSSLLMLVSALIGRERLLDLYQIAIKEKYRFYSF 352
Query: 351 GDTSLLF 357
GD L+
Sbjct: 353 GDGMLIL 359
>gi|134301766|ref|YP_001121734.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. tularensis WY96-3418]
gi|172044163|sp|A4IXG2|QUEA_FRATW RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|134049543|gb|ABO46614.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. tularensis WY96-3418]
Length = 338
Score = 436 bits (1123), Expect = e-120, Method: Composition-based stats.
Identities = 135/357 (37%), Positives = 209/357 (58%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LP IA P+ RD++RL+ ++ I+D+ +D F+N D +V
Sbjct: 1 MKTDDFDYKLPEELIASYPLENRDASRLLKLNKQTG---EIADYKFTDFIDFINPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV+ A+L G + ++ + +P + + + ++ G ++
Sbjct: 58 FNNSKVMLARLYGSKT-----TGAKLEYLIERIKNPKLFETHIKANRSPAIGSEIYVEDT 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
A V+DK G + L+ ++ + + G IPLPPY+ KR + D Y
Sbjct: 113 ------LAKVLDK--DGGMYLLEIQGDKDIYQLMEEFGHIPLPPYM--KRDDEEFDAERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GSVAAPTAGLHF+ L+ ++ G+ + ++TLHVG+GTF PV+V+D + H M
Sbjct: 163 QTVYAQDLGSVAAPTAGLHFSKELMQQIKDKGVDIAYITLHVGSGTFKPVQVDDVESHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E+ + Q + K GGR++++GTTS+R LETA ++G I P+ G T+IF+ PG
Sbjct: 223 HAEVISVPVEVCQKIRQTKENGGRVIAIGTTSVRSLETA-GQNGQIEPYQGETDIFLYPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F VD +++NFHLPKSTL+MLVSAF E+ K Y+HAI+ YRF+SYGD +F
Sbjct: 282 KKFNVVDAMITNFHLPKSTLIMLVSAFADKEKIIKAYEHAIAERYRFFSYGDAMFIF 338
>gi|225076136|ref|ZP_03719335.1| hypothetical protein NEIFLAOT_01168 [Neisseria flavescens
NRL30031/H210]
gi|224952479|gb|EEG33688.1| hypothetical protein NEIFLAOT_01168 [Neisseria flavescens
NRL30031/H210]
Length = 342
Score = 436 bits (1123), Expect = e-120, Method: Composition-based stats.
Identities = 152/356 (42%), Positives = 209/356 (58%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF+LP IA P R S+RL+V P L I D DLP ++ D +V
Sbjct: 1 MDISDFDFELPEKLIAQHPPEVRGSSRLLVALP----TLPIEDKHFGDLPDYVAPGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + +I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKAS-----GGKIEALIERVLDAHTALAHIRSSKSPKPGTELIF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++++ E+ + + + G +PLPPYI +R D D Y
Sbjct: 109 --EGDIRAVMMERAE--ELFCLKFEGEQTVYELLEQNGHLPLPPYI--ERAADDEDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL + G++ VTLHVGAGTF PV+V+ ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTDELLGRLKAKGVETAEVTLHVGAGTFQPVRVDKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A T A+ + K+RG ++ +VGTTS+R LE+A E G + G T+IFITPG
Sbjct: 223 HSEWFDVPAETVAAVEAAKARGNKVWAVGTTSMRALESAARETGRLKAGRGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF D L++NFHLPKSTLLMLVSA G+E + +Y+HA+ YRF+SYGD +L
Sbjct: 283 YRFNVADRLITNFHLPKSTLLMLVSALSGMEHIRSVYRHAVEQEYRFFSYGDAMIL 338
>gi|238020815|ref|ZP_04601241.1| hypothetical protein GCWU000324_00705 [Kingella oralis ATCC 51147]
gi|237867795|gb|EEP68801.1| hypothetical protein GCWU000324_00705 [Kingella oralis ATCC 51147]
Length = 340
Score = 436 bits (1123), Expect = e-120, Method: Composition-based stats.
Identities = 150/360 (41%), Positives = 214/360 (59%), Gaps = 21/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R ++RL+V P+ +D +DLP+++N+ D +V
Sbjct: 1 MQLSDFDFTLPEHLIAQNPPATRGNSRLLVALPD----APFTDKQFADLPSYINAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + +I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMRARLFGQKAS-----GGKIEALIERVLDAHTALAHIRSSKSPKAGAALIF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ AT++++ + L +G E + + G +PLPPYI R DA D
Sbjct: 109 --DGDIHATMLERADE---LFKIQFAGEETVYELLERHGKLPLPPYIV--RAADADDDER 161
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK QG+VAAPTAGLHFT LL L + G++ VTLHVGAGTF PV+V++ +H
Sbjct: 162 YQTVYAKFQGAVAAPTAGLHFTDALLGSLKAKGVEFAEVTLHVGAGTFQPVRVDNIAEHK 221
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE + A T + + K RG ++ SVGTTSLR +E+A G + G T+IFITP
Sbjct: 222 MHSEWFDVPADTVAKIAAAKQRGSKVWSVGTTSLRAIESAARS-GSLKAGQGDTDIFITP 280
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
G+ F+ +D L++NFHLPKSTLLMLVSAF G ++ + +Y+HA+ YRF+SYGD +L ++
Sbjct: 281 GFSFQVIDRLITNFHLPKSTLLMLVSAFSGCDKIRAVYRHAVEQEYRFFSYGDAMILGRE 340
>gi|56551748|ref|YP_162587.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Zymomonas
mobilis subsp. mobilis ZM4]
gi|81598273|sp|Q5NP84|QUEA_ZYMMO RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|56543322|gb|AAV89476.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Zymomonas
mobilis subsp. mobilis ZM4]
Length = 342
Score = 436 bits (1123), Expect = e-120, Method: Composition-based stats.
Identities = 178/359 (49%), Positives = 230/359 (64%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP IALRP PR+SARL+ V + D+ V+DLP L D ++
Sbjct: 1 MRVDLFDFELPTESIALRPAVPRESARLLQV-----TSQEMDDYHVADLPNLLQEGDLLI 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A L G + + IS + R W + R +K +K DI+ F
Sbjct: 56 FNDTRVIPAYLEGKK------NQARISANMIKREGLRQWQAFVRNAKRLKSDDIVDFGQD 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A V+ + + G +L F + +E + G +PLPPYIA KRP D +D DY
Sbjct: 110 -----VSARVVHRNDDGSVLFEF-LGNEPVEILLERAGNMPLPPYIAHKRPADQQDRQDY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +G+VAAPTA LHFT LL RL G+K VTLHVGAGTF+P+KVED+DDH+M
Sbjct: 164 QTIFAEKEGAVAAPTASLHFTEELLQRLEEKGVKHTKVTLHVGAGTFLPMKVEDSDDHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE G I A TA A+N K +GGR+++ GTTSLRL+E+A E G+++P+S T+IFITPG
Sbjct: 224 HSEWGQISAETANAINETKKQGGRVIATGTTSLRLIESAADETGLVHPFSDETDIFITPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRFR +D LM+NFHLPKSTL MLVSA G E+ YQHAI YRFYSYGD+SLL K
Sbjct: 284 YRFRVIDGLMTNFHLPKSTLFMLVSALMGREKMLAAYQHAIDTGYRFYSYGDSSLLLPK 342
>gi|149371547|ref|ZP_01890963.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queuosine
biosynthesis protein) [unidentified eubacterium SCB49]
gi|149355174|gb|EDM43734.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queuosine
biosynthesis protein) [unidentified eubacterium SCB49]
Length = 349
Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats.
Identities = 140/361 (38%), Positives = 193/361 (53%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F F+LP +A P RD +RLMV++ I DL + +D +
Sbjct: 1 MKLSNFGFELPDELLAEYPSENRDESRLMVLNRK---EQTIEHKKFKDLIDYFEEDDILC 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + I L ++ + W V P++ I+ G+ L+F
Sbjct: 58 LNNTKVFPARLFGNK----EKTGARIEVFLLRELNSETRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
+ L A VID + L F G E ++ +G PLP YI KR ++ D
Sbjct: 114 DDE---TLVAEVIDNTTSRGRTLRFLFDGSYEEFRNKLKELGETPLPKYI--KRDVEEDD 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ +LL R G+ V VTLHVG GTF V+VED
Sbjct: 169 AERYQTIYAKEEGAVAAPTAGLHFSKHLLKRFEIKGVNVAEVTLHVGLGTFSAVEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I T +N RI +VGTT +R LE++ + + +N +SG+TN F
Sbjct: 229 KHKMDSEEMHIGKETVDLINQGLIDKRRICAVGTTVMRSLESSVSSNHTLNEFSGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH PKSTLLM+VSAF G + T++ Y+ AI Y FYSYGD L+
Sbjct: 289 IFPPYDFSIANCMITNFHTPKSTLLMMVSAFAGHDFTQRAYEEAIKEKYNFYSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|258512074|ref|YP_003185508.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
DSM 446]
gi|257478800|gb|ACV59119.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
DSM 446]
Length = 355
Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats.
Identities = 140/361 (38%), Positives = 210/361 (58%), Gaps = 17/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FD++LP IA +P+ RD +RL+ V+ + +++ LN D +V
Sbjct: 1 MRVEDFDYELPEHLIAQQPLPERDQSRLL---VVDPVDRVVRHRIFAEIVEELNPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVS--PNSWSVYARPSKVIKKGDILHFF 118
N+++V+ A+L+ + + L V PN+W ARP+K ++ G L
Sbjct: 58 MNDSRVLPARLHAFK----PDTGGHVELLLVRPVDDQPNTWQCLARPAKRVRAGHRLVVG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
DG R+E V+ + + G L+ F + ++ +G +PLPPYI K D
Sbjct: 114 EGDG--RVEMEVVGEEDEGIRLVRFHTNESVIDVA-HRLGEMPLPPYIHEK----LEDQE 166
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YAK GSVAAPTAGLHFT LL +L G+++ VTLHVG GTF PV+VE+ ++H
Sbjct: 167 RYQTVYAKRVGSVAAPTAGLHFTERLLQKLRDKGVQLCHVTLHVGIGTFRPVQVENVEEH 226
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE + TA+ +N KS G +++VGTT+LR LE A + G++ G T+IFI
Sbjct: 227 RMHSEWYEVSPETAEMVNQAKSEGRPVIAVGTTALRTLEAA-GQSGVLEAKQGETDIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG++F +D L++NFHLPKSTL MLV A G + K +Y+ A+ +YRF+S+GD + +
Sbjct: 286 PGFKFHIMDGLITNFHLPKSTLFMLVCAIMGTDYAKAVYREAVERSYRFFSFGDAMFIKR 345
Query: 359 K 359
+
Sbjct: 346 R 346
>gi|260459151|ref|ZP_05807406.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Mesorhizobium opportunistum WSM2075]
gi|259034705|gb|EEW35961.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Mesorhizobium opportunistum WSM2075]
Length = 362
Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats.
Identities = 201/361 (55%), Positives = 252/361 (69%), Gaps = 9/361 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRP PRDSA ++VV P + D V DLP+ L + D +V
Sbjct: 1 MRVDLFDFDLPEERIALRPAEPRDSAGMLVVRPG----ETLDDRRVGDLPSLLRAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R + ++ TLHMR++P+ W + RP K + GD +HF
Sbjct: 57 FNDTKVIPAQLKGIRRRG--EAQAQVEATLHMRMAPDRWLAFMRPGKRVAAGDRIHFGHD 114
Query: 121 DGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+L+ATVI+K GE LL F +SG L+ + VG IPLPPYIA KR D RD
Sbjct: 115 GNSCFLGQLDATVIEKGEGGEALLGFDLSGPFLDEALHAVGHIPLPPYIASKRDDDERDR 174
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YA+ +G+VAAPTAGLHFT L + L + G++ FVTLHVGAGTF+PVK +DT D
Sbjct: 175 ADYQTIYAREEGAVAAPTAGLHFTPELFAALDAKGVERRFVTLHVGAGTFLPVKADDTAD 234
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+EIG + A TA+ALN+ K+RGGRI++VGTTSLRLLE+A +DG + WSG T+IFI
Sbjct: 235 HKMHAEIGSVSAATAEALNAAKARGGRIIAVGTTSLRLLESAARDDGTLAAWSGPTDIFI 294
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFR D+LM+NFHLP+STL MLVSAF G+E + Y HAI+ YRFYSYGD SLL+
Sbjct: 295 TPGYRFRTADMLMTNFHLPRSTLFMLVSAFSGLETMRAAYAHAIAERYRFYSYGDASLLY 354
Query: 358 Q 358
+
Sbjct: 355 R 355
>gi|325139519|gb|EGC62059.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis CU385]
Length = 356
Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats.
Identities = 153/360 (42%), Positives = 209/360 (58%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P+ + + D + DLP ++ + D +V
Sbjct: 11 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPD----MPLQDRVFGDLPDYVEAGDVLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 67 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A + + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 119 --EGGIRAVTVGR--EGELFCLRFEGGETVYELLEQNGHLPLPPYI--ERAADADDDSRY 172
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 173 QTVYAKYQGAVAAPTAGLHFTEELLHRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 232
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + TA A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 233 HSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 292
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRF VD L++NFHLPKSTLLMLVSAF G+ + Y+HA+ YRF+SYGD +L +
Sbjct: 293 YRFNVVDRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRHAVEREYRFFSYGDAMVLGRNE 352
>gi|167855507|ref|ZP_02478270.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
parasuis 29755]
gi|167853373|gb|EDS24624.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
parasuis 29755]
Length = 361
Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats.
Identities = 132/366 (36%), Positives = 198/366 (54%), Gaps = 18/366 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ ++ N D +DL ++S D ++
Sbjct: 1 MRVTDFHFDLPDELIARYPTAERSASRLLYLNGNTG---EYQDQQFNDLLEHIHSGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K+ +
Sbjct: 58 FNNTRVIPARLYGRKAS-----GGKLEVLVERVLDEHRCLAHIRSSKAPKENAEIFLGED 112
Query: 121 DGQSR--LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+A ++ + + + + + L + G +PLPPYI RP + D
Sbjct: 113 KLGEGNGFKAIMVARHDA--LFELKFEASQPLFDLLQQAGHMPLPPYI--DRPDEDADQE 168
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y+K+ G+VAAPTAGLHF +L +L G++ FVTLHVGAGTF PV+VE ++H
Sbjct: 169 RYQTVYSKVLGAVAAPTAGLHFDHQMLQKLQEKGVQTAFVTLHVGAGTFQPVRVETIEEH 228
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTN 294
MH+E + + + K++G R++ VGTTS+R +E+A E +I P+ T
Sbjct: 229 KMHAEYAEVSQEVVDKILATKAQGKRVICVGTTSVRSIESAAQAAEKEGKLIAPFYSDTA 288
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IF+ PG FR VD L++NFHLP+STL+MLVSAF G + YQHA+ YRF+SYGD
Sbjct: 289 IFLYPGKTFRIVDALVTNFHLPESTLIMLVSAFAGFKNCMNAYQHAVESQYRFFSYGDAM 348
Query: 355 LLFQKR 360
+ +
Sbjct: 349 FITKNE 354
>gi|227327498|ref|ZP_03831522.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pectobacterium carotovorum subsp. carotovorum WPP14]
Length = 355
Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats.
Identities = 136/359 (37%), Positives = 203/359 (56%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ + +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPQAERSGCRLLSLDGPTGN---LTHGVFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKLEVLVERVLDDHRVLAHVRASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++AT+ + + + + ++ ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SVKATMAARHDA--LFELHFDDSRDVLSILNDIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF +L+ L GI + FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSQRPGAVAAPTAGLHFDEPMLAALREKGIDMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE--TATTEDGIINPWSGFTNIFIT 298
H+E + A+ + K+RG R+++VGTTS+R LE +++ I P+ G T IFI
Sbjct: 226 HAEYAEVPQDVVDAVLACKARGNRVIAVGTTSVRSLESAAQASQNAAIEPFFGDTKIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY +R +D L++NFHLP+STL+MLVSAF G + T Y+ A++ YRF+SYGD +
Sbjct: 286 PGYHYRIIDALVTNFHLPESTLIMLVSAFAGYQNTLSAYRQAVAEQYRFFSYGDAMFIT 344
>gi|260773399|ref|ZP_05882315.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
metschnikovii CIP 69.14]
gi|260612538|gb|EEX37741.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Vibrio
metschnikovii CIP 69.14]
Length = 350
Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats.
Identities = 138/364 (37%), Positives = 210/364 (57%), Gaps = 19/364 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R +RL+ ++ + D +D+ ++ D +V
Sbjct: 1 MQVSDFHFDLPDELIARYPKAQRTDSRLLRLNGTTGERV---DGTFTDVLHYIEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + +S + R SK K G L+ Q
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKLEVLVERMLDEHSILAHVRCSKPPKPGTELYLGEQ 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D + AT++ + + + + + + ++ +G +PLPPYI RP + D Y
Sbjct: 113 D---QYLATMVARHDA--LFEIRFNAQQTVLEILNHIGHMPLPPYI--DRPDEETDKERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF LL ++ + G++ +VTLHVGAGTF PV+VE+ DH M
Sbjct: 166 QTVYNQKPGAVAAPTAGLHFDQALLDQIQAKGVEFAYVTLHVGAGTFQPVRVENIHDHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT----TEDGIINPWSGFTNIF 296
H+E + A+ + K+RGGR+++VGTTS+R LE+A + + P+ G T+IF
Sbjct: 226 HAEYVEVPEEVVAAIAATKARGGRVIAVGTTSVRSLESAAQDALAKGTALAPFFGDTDIF 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+++ +D L++NFHLP+STL+MLVSAF G E T YQHA+ YRF+SYGD +
Sbjct: 286 IFPGYQYQLIDALITNFHLPESTLIMLVSAFAGYEHTMAAYQHAVEQKYRFFSYGDAMFI 345
Query: 357 FQKR 360
+ +
Sbjct: 346 EKNQ 349
>gi|331005923|ref|ZP_08329271.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [gamma
proteobacterium IMCC1989]
gi|330420279|gb|EGG94597.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [gamma
proteobacterium IMCC1989]
Length = 349
Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats.
Identities = 135/360 (37%), Positives = 197/360 (54%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F ++LP IA P R +RL+ + N + + D+ L + D +V
Sbjct: 1 MRRQDFSYELPEDLIAFTPAAERTGSRLLCLEGNTGA---LQHNEFPDIIHQLQAGDVMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A++ G + ++ + + + R SK K I+
Sbjct: 58 FNDTQVIPARVFGQKE-----TGGKVEILVERLIGTQQVWAHIRASKSPKANTIITL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++ TV + L + + G +PLPPYI R+ D D Y
Sbjct: 110 --DNGVDVTVKGRCGADNALFLVDFGENGALDVLQQAGHMPLPPYIEREDVPD--DQERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y G+VAAPTAGLHF +L+ + GI + +VTLHVGAGTF PV+V++ DHIM
Sbjct: 166 QTVYGCKPGAVAAPTAGLHFDESLMKAIADKGIIIVYVTLHVGAGTFQPVRVDNIADHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE+ + A A+N K+ G R+V+VGTTS+R LE+A + + P+ G T+IFIT
Sbjct: 226 HSEVIDVSADVCDAINQAKAEGRRVVAVGTTSMRCLESAAKYSHGDTLMPFQGETDIFIT 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY+F+ VD L++NFHL +STLLMLVSAF G E T YQ A++ YRF+SYGD + +
Sbjct: 286 PGYQFQVVDALVTNFHLSESTLLMLVSAFAGYEHTMHAYQQAVAQRYRFFSYGDAMFITR 345
>gi|241762411|ref|ZP_04760490.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Zymomonas
mobilis subsp. mobilis ATCC 10988]
gi|241373098|gb|EER62747.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Zymomonas
mobilis subsp. mobilis ATCC 10988]
Length = 342
Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats.
Identities = 177/359 (49%), Positives = 230/359 (64%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP IALRP PR+SARL+ V + D+ V+DLP L D ++
Sbjct: 1 MRVDLFDFELPTESIALRPAVPRESARLLQV-----TSQGMDDYHVADLPNLLQEGDLLI 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A L G + + IS + R W + R +K +K DI+ F
Sbjct: 56 FNDTRVIPAYLEGKK------NQARISANMIKREGLRQWQAFVRNAKRLKSDDIVDFGQD 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A V+ + + G +L F + +E + G +PLPPYIA KRP D +D DY
Sbjct: 110 -----VSARVVHRNDDGSVLFEF-LGNEPVEILLERAGNMPLPPYIAHKRPADQQDRQDY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +G+VAAPTA LHFT LL RL G+K VTLHVGAGTF+P+KVED+DDH+M
Sbjct: 164 QTIFAEKEGAVAAPTASLHFTEELLQRLEEKGVKHTKVTLHVGAGTFLPMKVEDSDDHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE G I A TA A+N K +GGR+++ GTTSLRL+E+A E G+++P+S T+IFITPG
Sbjct: 224 HSEWGQISAETANAINETKKQGGRVIATGTTSLRLIESAADEMGLVHPFSDETDIFITPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRF+ +D LM+NFHLPKSTL MLVSA G E+ YQHAI YRFYSYGD+SLL K
Sbjct: 284 YRFQVIDGLMTNFHLPKSTLFMLVSALMGREKMLAAYQHAIDTGYRFYSYGDSSLLLPK 342
>gi|254671005|emb|CBA07772.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis alpha153]
gi|308389957|gb|ADO32277.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Neisseria meningitidis alpha710]
Length = 356
Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats.
Identities = 152/360 (42%), Positives = 210/360 (58%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P+ + + D + DLP ++ + D +V
Sbjct: 11 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPD----MPLQDRVFGDLPDYVEAGDVLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 67 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 119 --EGGIRAVMVGR--EGELFCLRFEGGQTVYELLEQNGHLPLPPYI--ERAADADDDSRY 172
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 173 QTVYAKYQGAVAAPTAGLHFTEELLHRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 232
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + TA A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 233 HSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 292
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRF VD L++NFHLPKSTLLMLVSAF G+ + Y++A+ YRF+SYGD +L +
Sbjct: 293 YRFNVVDRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGDAMVLGRNE 352
>gi|91792758|ref|YP_562409.1| S-adenosylmethionine [Shewanella denitrificans OS217]
gi|122968830|sp|Q12PE0|QUEA_SHEDO RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|91714760|gb|ABE54686.1| S-adenosylmethionine [Shewanella denitrificans OS217]
Length = 346
Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats.
Identities = 140/361 (38%), Positives = 209/361 (57%), Gaps = 19/361 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R+++RL+ + ++D +DL +N D +V
Sbjct: 1 MRVADFSFDLPDELIARYPTAQRNASRLLTLDGPTGA---LADKQFTDLFEMINPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK K +++
Sbjct: 58 FNNTRVIPARLFGQKA-----TGGKLEILVERMLDDKRILAHVRSSKSPKVDTLINL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DG+ +++ +I + + + + +S + + + VG +PLPPYI RP + D Y
Sbjct: 110 DGEHQMK--MIARHDA--LFELELLSELTILEVLEQVGHMPLPPYI--DRPDEDADKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y K G+VAAPTAGLHF +LS L G+ + FVTLHVGAGTF PV+V++ +H M
Sbjct: 164 QTVYNKTPGAVAAPTAGLHFDDAMLSALKHKGVNIAFVTLHVGAGTFQPVRVDNVLEHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI--INPWSGFTNIFIT 298
HSE + + K+ G R+++VGTTS+R LE+A G + +SG T+IFI
Sbjct: 224 HSEWADVPQDVVDLIAQTKAAGNRVIAVGTTSVRSLESAAKACGDKPLATFSGDTDIFIY 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY F+ VD +++NFHLP+STL+ML+SAF G++E + YQHAI+ YRF+SYGD L +
Sbjct: 284 PGYEFKVVDAMVTNFHLPESTLIMLISAFTGVDEVRYAYQHAIAQKYRFFSYGDAMFLTK 343
Query: 359 K 359
K
Sbjct: 344 K 344
>gi|110639429|ref|YP_679638.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cytophaga
hutchinsonii ATCC 33406]
gi|123058555|sp|Q11QL8|QUEA_CYTH3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|110282110|gb|ABG60296.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Cytophaga
hutchinsonii ATCC 33406]
Length = 348
Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats.
Identities = 129/361 (35%), Positives = 195/361 (54%), Gaps = 17/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EF F LP +A P RD A++MV++ I + D+ + + D +V
Sbjct: 1 MKLSEFKFALPAELVAQHPAANRDEAKMMVINRATGT---IEHKIFKDIINYFDEGDIMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + +I L ++ + W V P++ I+ G+ L+F
Sbjct: 58 MNNTKVFPARLYGNK----EKTGAKIEVFLLRELNAELHLWDVLVDPARKIRVGNKLYF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
G+S L A V+D + + F G + + I +G PLP YI KRPI+ D
Sbjct: 113 ---GESDLVAEVVDNTTSRGRTIRFLFDGNSEDFSKIIETIGETPLPRYI--KRPIEEAD 167
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT +A+ +G+VAAPTAGLHFT ++ R+ G+ +TLHVG G+F V VED
Sbjct: 168 KDRYQTIFAENKGAVAAPTAGLHFTKQVMKRMEIKGVNFAPLTLHVGLGSFRTVDVEDLT 227
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I++ TA +N R+ ++GTTS+R LE++ + + + +G+T+ F
Sbjct: 228 KHKMDSENFIIESTTADVVNKALDNKKRVCAIGTTSMRALESSVSANNRLKQNAGWTDRF 287
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F+ + +++NFH+P+STL M+ AF G E K Y+ AI Y F SYGD L+
Sbjct: 288 IFPPYDFKIANCMLTNFHMPESTLYMMACAFGGYELMTKAYKTAIKEKYNFLSYGDVMLI 347
Query: 357 F 357
Sbjct: 348 I 348
>gi|319639459|ref|ZP_07994209.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
mucosa C102]
gi|317399354|gb|EFV80025.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
mucosa C102]
Length = 342
Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats.
Identities = 153/356 (42%), Positives = 210/356 (58%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF+LP IA P R S+RL+V P L I D DLP ++ D +V
Sbjct: 1 MDISDFDFELPEKLIAQHPPEVRGSSRLLVALP----TLPIEDKHFGDLPDYVAPGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + +I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKAS-----GGKIEALIERVLDAHTALAHIRSSKSPKPGTELIF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++++ E+ + + + G +PLPPYI +R D D Y
Sbjct: 109 --EGDIRAVMLERAE--ELFYLKFEGAQTVYELLEQNGHLPLPPYI--ERAADDEDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL + G++ VTLHVGAGTF PV+V+ ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTDELLGRLKAKGVETAEVTLHVGAGTFQPVRVDKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A T A+ + K+RG ++ +VGTTS+R LE+A E G + G T+IFITPG
Sbjct: 223 HSEWFDVPAETVAAVEAAKARGNKVWAVGTTSMRALESAACETGRLEAGRGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF D L++NFHLPKSTLLMLVSAF G+E + +Y+HA+ YRF+SYGD +L
Sbjct: 283 YRFNVADRLITNFHLPKSTLLMLVSAFSGMEHIRSVYRHAVEQEYRFFSYGDAMIL 338
>gi|255532466|ref|YP_003092838.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Pedobacter
heparinus DSM 2366]
gi|255345450|gb|ACU04776.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Pedobacter
heparinus DSM 2366]
Length = 349
Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats.
Identities = 138/361 (38%), Positives = 195/361 (54%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP S +A P RD ARLMV+H + I + D+ + + D ++
Sbjct: 1 MKLSQFKFNLPESLVANNPSEQRDEARLMVLHKDSGK---IEHKIFKDVLDYFDDQDVMI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 LNNTKVFPARLYGNK----EKTGATIEVFLLRELNKELRLWDVLVDPARKIRVGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D L A V+D + + F G E + I ++G PLP YI RK A+D
Sbjct: 114 DDD---LLVAEVVDNTTSRGRTIRFLFDGTDEEFRKNIEILGETPLPKYIKRK--ATAQD 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT +AK +G+VAAPTAGLHF+ L+ RL GI VTLHVG GTF V+VED
Sbjct: 169 KERYQTIFAKHEGAVAAPTAGLHFSRELMKRLELKGINFAEVTLHVGLGTFRSVEVEDLT 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I+ A +N R RI +VGTTS+R +E+A + + + +T+ F
Sbjct: 229 KHKMDSEQFIIEQKDADIVNKAIERKKRICAVGTTSMRAIESAVSSGRTLKAANDWTSKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH P+STLLM+VSAF G + + Y+ A+ YRFYSYGD L+
Sbjct: 289 IFPPYDFSIANSMITNFHTPESTLLMMVSAFGGYDYVRHAYEVALKEKYRFYSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|218288861|ref|ZP_03493112.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Alicyclobacillus acidocaldarius LAA1]
gi|218240950|gb|EED08127.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Alicyclobacillus acidocaldarius LAA1]
Length = 355
Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats.
Identities = 142/361 (39%), Positives = 212/361 (58%), Gaps = 17/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FD++LP IA +P+ RD +RL+ V+ + +++ LNS D +V
Sbjct: 1 MRVEDFDYELPEHLIAQQPLPERDQSRLL---VVDPVDRVVRHRIFAEIVEELNSGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVS--PNSWSVYARPSKVIKKGDILHFF 118
N+++V+ A+L+ V+ + L V PN+W ARP+K ++ G L
Sbjct: 58 MNDSRVLPARLHAVK----PDTGGHVELLLVRPVDDQPNTWQCLARPAKRLRVGHRLVVG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
DG R+E V+ + + G L+ F + ++ +G +PLPPYI K D
Sbjct: 114 EGDG--RVEIEVVGEEDEGIRLVRFHTNESVIDVA-HRLGEMPLPPYIHEK----LEDQE 166
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YAK GSVAAPTAGLHFT LL +L G+++ VTLHVG GTF PV+VE+ ++H
Sbjct: 167 RYQTVYAKRVGSVAAPTAGLHFTERLLQKLRDKGVQLCHVTLHVGIGTFRPVQVENVEEH 226
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE + TA+ +N KS G +++VGTT+LR LE A + G++ G T+IFI
Sbjct: 227 RMHSEWYEVSPATAEIVNRAKSEGRPVIAVGTTALRTLEAA-GQSGMLEAKQGETDIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG++F +D L++NFHLPKSTL MLV A G + K +Y+ A+ +YRF+S+GD + +
Sbjct: 286 PGFKFHIMDGLITNFHLPKSTLFMLVCAIMGTDYAKAVYREAVERSYRFFSFGDAMFIKR 345
Query: 359 K 359
+
Sbjct: 346 R 346
>gi|254804318|ref|YP_003082539.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis alpha14]
gi|254667860|emb|CBA03913.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis alpha14]
Length = 356
Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats.
Identities = 151/360 (41%), Positives = 209/360 (58%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P+ + + D + DLP ++ + D +V
Sbjct: 11 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPD----MPLQDRVFGDLPDYVEAGDVLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 67 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 119 --EGGIRAVMVGR--EGELFCLSFEGGETVYELLEQNGHLPLPPYI--ERAADADDDSRY 172
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 173 QTVYAKYQGAVAAPTAGLHFTEELLHRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 232
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + TA A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 233 HSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 292
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRF D L++NFHLPKSTLLMLVSAF G+ + Y++A+ YRF+SYGD +L +
Sbjct: 293 YRFNVADRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGDAMVLGRNE 352
>gi|219870890|ref|YP_002475265.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
parasuis SH0165]
gi|254764279|sp|B8F4R5|QUEA_HAEPS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|219691094|gb|ACL32317.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
parasuis SH0165]
Length = 361
Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats.
Identities = 132/366 (36%), Positives = 199/366 (54%), Gaps = 18/366 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP IA P R ++RL+ ++ N D +DL ++S D ++
Sbjct: 1 MRVTDFHFDLPDELIARYPTAERSASRLLYLNGNTG---EYQDQQFNDLLEHIHSGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K+ +
Sbjct: 58 FNNTRVIPARLYGRKAS-----GGKLEVLVERVLDEHRCLAHIRSSKAPKENAEIFLGED 112
Query: 121 DGQSR--LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+A ++ +++ + + + L + G +PLPPYI RP + D
Sbjct: 113 KLGEGNGFKAIMVARYDA--LFELKFEASQPLFDLLQQAGHMPLPPYI--DRPDEDADQE 168
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y+K+ G+VAAPTAGLHF +L +L G++ FVTLHVGAGTF PV+VE ++H
Sbjct: 169 RYQTVYSKVLGAVAAPTAGLHFDHQMLQKLQEKGVQTAFVTLHVGAGTFQPVRVETIEEH 228
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT----EDGIINPWSGFTN 294
MH+E + + + K++G R++ VGTTS+R +E+A E +I P+ T
Sbjct: 229 KMHAEYAEVSQDVVDKILATKAQGKRVICVGTTSVRSIESAAQAAEKEGKLIAPFYSDTT 288
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IF+ PG FR VD L++NFHLP+STL+MLVSAF G + YQHA+ YRF+SYGD
Sbjct: 289 IFLYPGKTFRIVDALVTNFHLPESTLIMLVSAFAGFKNCMNAYQHAVESQYRFFSYGDAM 348
Query: 355 LLFQKR 360
+ +
Sbjct: 349 FITKNE 354
>gi|92114949|ref|YP_574877.1| S-adenosylmethionine [Chromohalobacter salexigens DSM 3043]
gi|122419294|sp|Q1QTN0|QUEA_CHRSD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|91798039|gb|ABE60178.1| S-adenosylmethionine [Chromohalobacter salexigens DSM 3043]
Length = 356
Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats.
Identities = 144/361 (39%), Positives = 206/361 (57%), Gaps = 21/361 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F FDLP IA P R RL+ + I+ +DL L D +V
Sbjct: 1 MQRADFHFDLPDELIARYPSETRSDCRLLCLDDATGD---IAHRRFTDLLTLLAPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + L + + + R SK + G L F
Sbjct: 58 FNDTRVIPARLFGQKAS-----GGRVEMLLERPLDAHRGLAHLRASKAPRPGTELIF--- 109
Query: 121 DGQSRLEATVIDKWNT-GEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ + A V + + E+ + IEL + G +PLPPYI R+ +D D
Sbjct: 110 --EGDVHAVVEARHDALFELRFLGETPMIEL---LENHGHMPLPPYIDREDELD--DRER 162
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ +G+VAAPTAGLHF + L+ L G+++ +VTLHVGAGTF PV+V+D +H
Sbjct: 163 YQTVYARREGAVAAPTAGLHFDTPLMEALRERGVEMGYVTLHVGAGTFQPVRVDDIREHH 222
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFI 297
MHSE +D + + + ++RGGR+++VGTTS+R LETA+ EDG I P+ G T+IFI
Sbjct: 223 MHSEWLEVDETLCRQVEATRARGGRVIAVGTTSVRCLETASQGQEDGHIAPFRGDTDIFI 282
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY++R VD L++NFHLP+STLLMLVSAF G + + Y+ A++ Y F+SYGD L
Sbjct: 283 YPGYQWRCVDALITNFHLPESTLLMLVSAFAGYPQVMRAYRAAVAERYAFFSYGDAMFLN 342
Query: 358 Q 358
+
Sbjct: 343 R 343
>gi|208779883|ref|ZP_03247227.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
novicida FTG]
gi|208744338|gb|EDZ90638.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
novicida FTG]
Length = 338
Score = 435 bits (1120), Expect = e-120, Method: Composition-based stats.
Identities = 135/357 (37%), Positives = 210/357 (58%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LP IA P+ RD++RL+ ++ I+D+ +D F+N D +V
Sbjct: 1 MKTDDFDYKLPEELIASYPLENRDASRLLKLNKQTG---EIADYKFTDFIDFINPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV+ A+L G + ++ + +P + + + ++ G ++
Sbjct: 58 FNNSKVMLARLYGSKT-----TGAKLEYLIERIKTPKLFETHIKANRSPAIGSEIYVEDT 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
A V+DK G + L+ ++ R + G IPLPPY+ KR + D Y
Sbjct: 113 ------LAKVLDK--DGGMYLLEIQGDKDIYRLMEEFGHIPLPPYM--KRDDEEFDAERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GSVAAPTAGLHF+ L+ ++ G+ + ++TLHVG+GTF PV+V+D + H M
Sbjct: 163 QTVYAQDLGSVAAPTAGLHFSKELMQQIKDKGVDIAYITLHVGSGTFKPVQVDDVESHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E+ + Q + K+ GGR++++GTTS+R LETA ++G I P+ G T+IF+ PG
Sbjct: 223 HAEVISVPVEVCQKIRQTKANGGRVIAIGTTSVRSLETA-GQNGQIEPYQGETDIFLYPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F VD +++NFHLPKSTL+MLVSAF E+ K Y+HAI+ YRF+SYGD ++
Sbjct: 282 KKFNVVDAMITNFHLPKSTLIMLVSAFADKEKIIKAYEHAIAERYRFFSYGDAMFIY 338
>gi|225010482|ref|ZP_03700953.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Flavobacteria bacterium MS024-3C]
gi|225005311|gb|EEG43262.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Flavobacteria bacterium MS024-3C]
Length = 349
Score = 435 bits (1120), Expect = e-120, Method: Composition-based stats.
Identities = 138/361 (38%), Positives = 197/361 (54%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F F+LP ++ P RD ++LMV+ I + D+ + + D +V
Sbjct: 1 MKLSAFGFELPEELLSEYPAENRDESKLMVIDRAKGT---IEHKMFKDIIDYFDEGDVMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 LNNTKVFPARLYGNK----EKTGARIEVFLLRELNEEQRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
+ L A VID + L F G + +++ +G PLP YI KR ++A D
Sbjct: 114 EDE---SLVAEVIDNTTSRGRTLRFLYDGSYTDFRKKLRDLGETPLPKYI--KREVEAED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAG+HF+ +LL RL G+ VTLHVG GTF PV+VED
Sbjct: 169 EERYQTIYAKHEGAVAAPTAGMHFSKHLLKRLEIKGVDFAEVTLHVGLGTFNPVEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I+ +N K++ RI +VGTT +R LETA + +N G+TN F
Sbjct: 229 KHKMDSEELIIEEKATVTINHAKTQKKRICAVGTTVMRSLETAVSSQHTLNSHQGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P + F + +++NFHLPKSTLLM++SAF G + K+ Y+ AI Y+FYSYGD L+
Sbjct: 289 IFPPHEFSIANCMITNFHLPKSTLLMMISAFMGHDLMKEAYKIAIEEKYKFYSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|212692507|ref|ZP_03300635.1| hypothetical protein BACDOR_02003 [Bacteroides dorei DSM 17855]
gi|237709173|ref|ZP_04539654.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 9_1_42FAA]
gi|237724349|ref|ZP_04554830.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. D4]
gi|265752700|ref|ZP_06088269.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 3_1_33FAA]
gi|212664982|gb|EEB25554.1| hypothetical protein BACDOR_02003 [Bacteroides dorei DSM 17855]
gi|229437218|gb|EEO47295.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
dorei 5_1_36/D4]
gi|229456869|gb|EEO62590.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 9_1_42FAA]
gi|263235886|gb|EEZ21381.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 3_1_33FAA]
Length = 351
Score = 435 bits (1120), Expect = e-120, Method: Composition-based stats.
Identities = 133/363 (36%), Positives = 196/363 (53%), Gaps = 16/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P RD +RLMVVH + I + D+ + + D +
Sbjct: 1 MKLSQFKFKLPEDKIALHPAKYRDESRLMVVHKSTGK---IEHKVFKDILDYFDDKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK----EKTGARIEVFLLRELNEELRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D + A VID + L F G E ++ + +G PLP +I +RP++ D
Sbjct: 114 DDD---SMVAEVIDNTTSRGRTLRFLYDGSHDEFKKALYALGEAPLPSFI--RRPVEEED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+QT +AK +G+V APTAGLHF+ L+ R+ GI FVT+H G G F + VED
Sbjct: 169 TERFQTIFAKNEGAVTAPTAGLHFSRELMKRMEIKGIDFAFVTMHAGLGNFREIDVEDLT 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE +++A + +N+ K G I +VGTT +R +ETA DG + + G+TN F
Sbjct: 229 KHKMDSEQMYVNADACRIVNNAKDEGKNICAVGTTVMRTIETAVGTDGHLKEFDGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFHLP STLLMLV+A+ G + + Y A+ YRF +YGD L+
Sbjct: 289 IFPPYDFSVANSMVTNFHLPLSTLLMLVAAYGGYDLVMEAYHTALKEDYRFGTYGDAMLI 348
Query: 357 FQK 359
K
Sbjct: 349 LDK 351
>gi|150009009|ref|YP_001303752.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Parabacteroides distasonis ATCC 8503]
gi|255014841|ref|ZP_05286967.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 2_1_7]
gi|256840989|ref|ZP_05546496.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Parabacteroides sp. D13]
gi|262383900|ref|ZP_06077036.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 2_1_33B]
gi|298375758|ref|ZP_06985714.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 3_1_19]
gi|301312060|ref|ZP_07217982.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 20_3]
gi|166216734|sp|A6LEL6|QUEA_PARD8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|149937433|gb|ABR44130.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Parabacteroides distasonis ATCC 8503]
gi|256736832|gb|EEU50159.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Parabacteroides sp. D13]
gi|262294798|gb|EEY82730.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 2_1_33B]
gi|298266795|gb|EFI08452.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 3_1_19]
gi|300830162|gb|EFK60810.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 20_3]
Length = 349
Score = 435 bits (1120), Expect = e-120, Method: Composition-based stats.
Identities = 126/361 (34%), Positives = 185/361 (51%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP IAL P RD +RLMVVH + I D+ + D +
Sbjct: 1 MKLSKFKFNLPSELIALHPAKNRDESRLMVVHRDTG---EIEHREFKDILDYYGKGDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
FNNTKV A+L G + + I L ++ + W V P++ I+ G+ L+F
Sbjct: 58 FNNTKVFPARLYGNK----EKTGARIEVFLLRELNEDLRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D + A VID + L F G E ++ + +G PLP YI +R ++ D
Sbjct: 114 EDD---SMVAEVIDNTTSRGRTLRFLYDGNHDEFKKALYALGETPLPKYI--EREVEPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQ +A +G+V AP AGLHF+ L+ RL + F+TLH G G F + VED
Sbjct: 169 EDRYQNIFAAEEGAVVAPAAGLHFSRELMKRLEIKDCQFAFLTLHSGLGNFREIDVEDLT 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE ++A +N K G ++ +VGT+ +R +ETA + DG + + G+TN F
Sbjct: 229 KHKMDSEQMVVNADVVDIVNKGKDEGHKVCAVGTSVMRAIETAVSTDGHLKEFEGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F +++NFH+P STLLM+ ++F G E Y A+ YRF +YGD L+
Sbjct: 289 IFPPYDFSVATSMVTNFHMPLSTLLMMTASFGGYELIMDAYDIALKEKYRFGAYGDAMLI 348
Query: 357 F 357
Sbjct: 349 L 349
>gi|294788018|ref|ZP_06753262.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Simonsiella
muelleri ATCC 29453]
gi|294484311|gb|EFG31994.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Simonsiella
muelleri ATCC 29453]
Length = 340
Score = 435 bits (1120), Expect = e-120, Method: Composition-based stats.
Identities = 152/360 (42%), Positives = 209/360 (58%), Gaps = 21/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EFDF+LP IA P R S+RL+V PN I D SDL ++ + D ++
Sbjct: 1 MHLSEFDFELPEQLIAQNPPTVRGSSRLLVALPN----QPIEDKKFSDLINYIEAGDVLI 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + +I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKAS-----GGKIEALIERVLDEHTALAHIRSSKSPKTGTELIF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISG-IELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ AT++++ L SG + + + G +PLPPYI R D D
Sbjct: 109 --DGEIHATMLERVGE---LFKIHFSGSLNVYELLEQHGVLPLPPYIERAAGADDDD--R 161
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK QG+VAAPTAGLHFT +L L G++ VTLHVGAGTF PV+V++ +H
Sbjct: 162 YQTVYAKHQGAVAAPTAGLHFTDEILGSLKDKGVEFAEVTLHVGAGTFQPVRVDNIAEHK 221
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE I T + + ++RG +I SVGTTSLR +E+A G + SG T+IFITP
Sbjct: 222 MHSEWFQIPDATVSTIQAAQARGNKIWSVGTTSLRAIESAARS-GSLKAGSGDTDIFITP 280
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
+ F+ +D L++NFHLPKSTLLMLVSAF G + +++YQHAI YRF+SYGD +L ++
Sbjct: 281 RFEFQIIDRLITNFHLPKSTLLMLVSAFSGSLKIREIYQHAIEQEYRFFSYGDAMILGRE 340
>gi|294677090|ref|YP_003577705.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhodobacter
capsulatus SB 1003]
gi|294475910|gb|ADE85298.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhodobacter
capsulatus SB 1003]
Length = 350
Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats.
Identities = 162/360 (45%), Positives = 224/360 (62%), Gaps = 13/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF+LP RIA+RP PR +A+L+V + P I D V+DLP L D +V
Sbjct: 1 MNLSDFDFELPEGRIAIRPARPRTAAKLLV-----ATPDAIRDLTVADLPDLLGPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRRE--KEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N TKVI A+L+G R + E + TL W A+P + +K+G+ + F
Sbjct: 56 LNTTKVIPARLSGRRTRQSAQGEVVARVEVTLLEPAPGGDWMALAKPLRKLKEGEEIVFS 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
L A + G++ + F+++G + + ++ G +PLPPYIA R D +D
Sbjct: 116 DA-----LSARIAAIAE-GQMRIRFNLTGPDFDAALAEAGAMPLPPYIAALRAPDEQDKT 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHFT +LL +L G++ VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVFAQKPGAVAAPTASLHFTPDLLEKLRDKGVQFTEVTLHVGAGTFLPVKVEDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A +N+ K+ GGR++ VGTT+LRL+E+A T G+I P++ T+IFI
Sbjct: 230 RMHAEWGEVTPQAAAEINATKAAGGRVIPVGTTALRLIESAATGPGVIAPFAATTDIFIY 289
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGYRFR D LM+NFHLPKSTLLMLVSA G + + +Y HA++ YRF+SYGD SLL
Sbjct: 290 PGYRFRIADALMTNFHLPKSTLLMLVSALMGQDRIRAIYDHALTKNYRFFSYGDASLLLP 349
>gi|254411962|ref|ZP_05025737.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Microcoleus
chthonoplastes PCC 7420]
gi|196180928|gb|EDX75917.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Microcoleus
chthonoplastes PCC 7420]
Length = 386
Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats.
Identities = 147/387 (37%), Positives = 205/387 (52%), Gaps = 42/387 (10%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+++ +++DLP RIA P+ PRDS+RL+VV P + DLP L S D +V
Sbjct: 10 LLLSSYNYDLPEGRIAQTPISPRDSSRLLVVE----SPTQHQHRIFRDLPQLLRSGDLLV 65
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G + + L N W +P + +K G + F
Sbjct: 66 LNNTRVIPARLYGRKVTGTP-----VEVLLLEEREQNCWLALVKPGRRLKVGSTIVFEPD 120
Query: 121 --------------------------DGQSRLEATVIDKWN--TGEILLVFSISGIELER 152
+S L+AT+I + + +G +L G L
Sbjct: 121 QPIVPASYGKTPLSSDDTETLRQDNLKNRSPLKATIIARDDATSGRLLQFDLPKGQSLVT 180
Query: 153 QISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIG 212
+ G +P PPYI + + YQT YA+I G+VAAPTAGLHFT LL + G
Sbjct: 181 LLPNYGQVPFPPYITHSQATPDQ----YQTVYAQIPGAVAAPTAGLHFTPELLEQCHISG 236
Query: 213 IKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTS 272
I+ +TLHVG GTF PV+VED +H MH E I A T + K+ GGR+++VGTT
Sbjct: 237 IEQASITLHVGVGTFRPVEVEDVTNHQMHGEWLEISAATVAQIQQTKAAGGRVIAVGTTV 296
Query: 273 LRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEE 332
+R LE A +G P+ G T +FI PGY+++ VD L++NFHLP+STLLMLVSA G E
Sbjct: 297 VRALEGAAA-NGEFQPYCGKTELFIYPGYQWQVVDGLITNFHLPRSTLLMLVSALIGRER 355
Query: 333 TKKMYQHAISHAYRFYSYGDTSLLFQK 359
K+Y AI++ YRFYS+GD L+ +
Sbjct: 356 LLKLYAEAIAYNYRFYSFGDAMLILPE 382
>gi|150003742|ref|YP_001298486.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
vulgatus ATCC 8482]
gi|254881029|ref|ZP_05253739.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 4_3_47FAA]
gi|294777441|ref|ZP_06742892.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
vulgatus PC510]
gi|319640036|ref|ZP_07994763.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 3_1_40A]
gi|166216700|sp|A6KZK0|QUEA_BACV8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|149932166|gb|ABR38864.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
vulgatus ATCC 8482]
gi|254833822|gb|EET14131.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 4_3_47FAA]
gi|294448509|gb|EFG17058.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
vulgatus PC510]
gi|317388314|gb|EFV69166.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 3_1_40A]
Length = 351
Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats.
Identities = 133/363 (36%), Positives = 196/363 (53%), Gaps = 16/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P RD +RLMVVH + I + D+ + + D +
Sbjct: 1 MKLSQFKFKLPEDKIALHPAKYRDESRLMVVHKSTGK---IEHKVFKDILDYFDDKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK----EKTGARIEVFLLRELNEELRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D + A VID + L F G E ++ + +G PLP +I +RP++ D
Sbjct: 114 DDD---SMVAEVIDNTTSRGRTLRFLYDGSHDEFKKALYALGEAPLPSFI--RRPVEEED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+QT +AK +G+V APTAGLHF+ L+ R+ GI FVT+H G G F + VED
Sbjct: 169 AERFQTIFAKNEGAVTAPTAGLHFSRELMKRMEIKGIDFAFVTMHAGLGNFREIDVEDLT 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE +++A + +N+ K G I +VGTT +R +ETA DG + + G+TN F
Sbjct: 229 KHKMDSEQMYVNADACRIVNNAKDEGKNICAVGTTVMRTIETAVGTDGHLKEFDGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFHLP STLLMLV+A+ G + + Y A+ YRF +YGD L+
Sbjct: 289 IFPPYDFSVANSMVTNFHLPLSTLLMLVAAYGGYDLVMEAYHTALKEDYRFGTYGDAMLI 348
Query: 357 FQK 359
K
Sbjct: 349 LDK 351
>gi|57234386|ref|YP_181528.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Dehalococcoides ethenogenes 195]
gi|91207421|sp|Q3Z8C1|QUEA_DEHE1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|57224834|gb|AAW39891.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Dehalococcoides ethenogenes 195]
Length = 343
Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats.
Identities = 143/359 (39%), Positives = 203/359 (56%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD++LP IA +P PRDS+RL+V++ + + D+ + D +V
Sbjct: 1 MKTSDFDYNLPQEYIAQKPAEPRDSSRLLVLNRQSG---ELKSCIFRDITGYFQPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN++V+ A++ G++ +I L W +P K K G I+ Q
Sbjct: 58 MNNSRVLPARIKGIK----QDTSAKIEILLLKSDGNGCWEALLKPGKRTKPGTIIDIRKQ 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DGQ ++A V+ G LL FS E + +G +PLPPYI D Y
Sbjct: 114 DGQIHIQAEVLADKEDGIKLLRFSD-----ETLLMKLGEVPLPPYIHTP----VSDPERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA GSVAAPTAGLHFT LL RL +G+ +VTLH+G TF PVK ED DHI+
Sbjct: 165 QTVYALTNGSVAAPTAGLHFTPELLERLGDMGVICTYVTLHIGLDTFRPVKEEDPSDHII 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
H E G + A TA A+ K+ G R+ VGT++ RL+E A+ +++GII +SG+ ++FI
Sbjct: 225 HREYGILSAETAAAICQAKANGKRVFCVGTSATRLVEQASSLSQNGIIELYSGWADLFIL 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+F+ D ++NFHLP+ST LML +AF G +K Y+ AI+ YRFYS+GD L+
Sbjct: 285 PGYKFKVADCFITNFHLPRSTPLMLTAAFAGWPLLQKAYEKAINEHYRFYSFGDAMLVL 343
>gi|5834352|gb|AAD53918.1|AF179611_2 S-adenosylmethionine tRNA ribosyltransferase [Zymomonas mobilis
subsp. mobilis ZM4]
Length = 342
Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats.
Identities = 177/359 (49%), Positives = 230/359 (64%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP IALRP PR+SARL+ V + D+ V+DLP L D ++
Sbjct: 1 MRVDLFDFELPTESIALRPAVPRESARLLQV-----TSQEMDDYHVADLPNLLQEGDLLI 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A L G + + IS + R W + R +K +K DI+ F
Sbjct: 56 FNDTRVIPAYLEGKK------NQARISANMIKREGLRQWQAFVRNAKRLKSDDIVDFGQD 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A V+ + + G +L F + +E + G +PLPPYIA KRP D +D DY
Sbjct: 110 -----VSARVVHRNDDGSVLFEF-LGNEPVEILLERAGNMPLPPYIAHKRPADQQDRQDY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +G+VAAPTA LHFT LL RL G+K VTLHVGAGTF+P+KVED+DDH+M
Sbjct: 164 QTIFAEKEGAVAAPTASLHFTEELLQRLEEKGVKHTKVTLHVGAGTFLPMKVEDSDDHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE G I A TA A+N K +GGR+++ GTTSLRL+++A E G+++P+S T+IFITPG
Sbjct: 224 HSEWGQISAETANAINETKKQGGRVIATGTTSLRLIDSAADETGLVHPFSDETDIFITPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRFR +D LM+NFHLPKSTL MLVSA G E+ YQHAI YRFYSYGD+SLL K
Sbjct: 284 YRFRVIDGLMTNFHLPKSTLFMLVSALMGREKMLAAYQHAIDTGYRFYSYGDSSLLLPK 342
>gi|325129515|gb|EGC52342.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis OX99.30304]
gi|325135638|gb|EGC58255.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis M0579]
gi|325207481|gb|ADZ02933.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis NZ-05/33]
Length = 346
Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats.
Identities = 153/360 (42%), Positives = 210/360 (58%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P+ + + D + DLP ++ + D +V
Sbjct: 1 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPD----MPLQDRVFGDLPDYVEAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 109 --EGGIRAVMVGR--EGELFCLRFEGGQTVYELLEQNGHLPLPPYI--ERAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+VE ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVEKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + TA A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 223 HSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRF VD L++NFHLPKSTLLMLVSAF G+ + Y++A+ YRF+SYGD +L +
Sbjct: 283 YRFNVVDRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGDAMVLGRNE 342
>gi|224457398|ref|ZP_03665871.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. tularensis MA00-2987]
gi|254875098|ref|ZP_05247808.1| queA, S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Francisella tularensis subsp. tularensis MA00-2987]
gi|254841097|gb|EET19533.1| queA, S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Francisella tularensis subsp. tularensis MA00-2987]
gi|282159506|gb|ADA78897.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. tularensis NE061598]
Length = 338
Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats.
Identities = 135/357 (37%), Positives = 209/357 (58%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LP IA P+ RD++RL+ ++ I+D+ +D F+N D +V
Sbjct: 1 MKTDDFDYKLPEELIASYPLENRDASRLLKLNKQTG---EIADYKFTDFIDFINPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV+ A+L G + ++ + +P + + + ++ G ++
Sbjct: 58 FNNSKVMLARLYGSKT-----TGAKLEYLIERIKTPKLFETHIKANRSPAIGSEIYVEDT 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
A V+DK G + L+ ++ + + G IPLPPY+ KR + D Y
Sbjct: 113 ------LAKVLDK--DGGMYLLEIQGDKDIYQLMEEFGHIPLPPYM--KRDDEEFDAERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GSVAAPTAGLHF+ L+ ++ G+ + ++TLHVG+GTF PV+V+D + H M
Sbjct: 163 QTVYAQDLGSVAAPTAGLHFSKELMQQIKDKGVDIAYITLHVGSGTFKPVQVDDVESHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E+ + Q + K GGR++++GTTS+R LETA ++G I P+ G T+IF+ PG
Sbjct: 223 HAEVISVPVEVCQKIRQTKENGGRVIAIGTTSVRSLETA-GQNGQIEPYQGETDIFLYPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F VD +++NFHLPKSTL+MLVSAF E+ K Y+HAI+ YRF+SYGD +F
Sbjct: 282 KKFNVVDAMITNFHLPKSTLIMLVSAFADKEKIIKAYEHAIAERYRFFSYGDAMFIF 338
>gi|254481740|ref|ZP_05094983.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [marine
gamma proteobacterium HTCC2148]
gi|214037869|gb|EEB78533.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [marine
gamma proteobacterium HTCC2148]
Length = 352
Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats.
Identities = 140/356 (39%), Positives = 213/356 (59%), Gaps = 11/356 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F + LP +A P+ R +RL+ + + ++ +D P L S+D +V
Sbjct: 1 MKRTDFSYHLPEELVAQYPLPERSDSRLLCLDGSDGA---MAHRNFTDFPGLLTSDDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + +S + R SK + G + +
Sbjct: 58 FNNTRVIPARLWGQKE-----TGGKLEILIERVTGTHSALAHIRCSKSPRPGTRILLAER 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+G S + + G + ++ S SG+ L + +G +PLPPYIAR+ + D Y
Sbjct: 113 EGASPGDYRLEVTGREGALFMLSSESGLPLTDIMRDIGHMPLPPYIARQ--DEEADQERY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +G+VAAPTAGLHFT +LL ++ + ++ VTLHVGAGTF PV+ ++ DHIM
Sbjct: 171 QTVFAEREGAVAAPTAGLHFTDDLLRQIAELDVRTAKVTLHVGAGTFQPVREDNILDHIM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A++ ++RGGR+V+VGTT++R LE+A+T G I P+ G T+IFI PG
Sbjct: 231 HSEFVEVGEDVCAAVSDARARGGRVVAVGTTAVRSLESASTT-GEIRPFVGDTDIFIYPG 289
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+FR+VD +++NFHLP+STLLMLVSAF G E Y+ A++ +YRF+SYGD L
Sbjct: 290 YQFRSVDAMVTNFHLPESTLLMLVSAFAGKEHIMNAYEEAVARSYRFFSYGDAMFL 345
>gi|121634226|ref|YP_974471.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis FAM18]
gi|120865932|emb|CAM09669.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Neisseria meningitidis FAM18]
Length = 359
Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats.
Identities = 152/356 (42%), Positives = 208/356 (58%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P+ + + D + DLP ++ + D +V
Sbjct: 14 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPD----MPLQDRVFGDLPDYVEAGDVLV 69
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 70 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 121
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A + + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 122 --EGGIRAVTVGR--EGELFCLRFEGGQTVYELLEQNGHLPLPPYI--ERAADADDDSRY 175
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 176 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 235
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + TA A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 236 HSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 295
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF VD L++NFHLPKSTLLMLVSAF G+ + Y++A+ YRF+SYGD +L
Sbjct: 296 YRFNVVDRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGDAMVL 351
>gi|56708277|ref|YP_170173.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. tularensis SCHU S4]
gi|110670748|ref|YP_667305.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. tularensis FSC198]
gi|254370761|ref|ZP_04986766.1| queuine tRNA-ribosyltransferase [Francisella tularensis subsp.
tularensis FSC033]
gi|81597340|sp|Q5NFL9|QUEA_FRATT RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|123359436|sp|Q14H21|QUEA_FRAT1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|56604769|emb|CAG45848.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. tularensis SCHU S4]
gi|110321081|emb|CAL09231.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. tularensis FSC198]
gi|151569004|gb|EDN34658.1| queuine tRNA-ribosyltransferase [Francisella tularensis subsp.
tularensis FSC033]
Length = 340
Score = 435 bits (1118), Expect = e-120, Method: Composition-based stats.
Identities = 135/357 (37%), Positives = 209/357 (58%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LP IA P+ RD++RL+ ++ I+D+ +D F+N D +V
Sbjct: 3 MKTDDFDYKLPEELIASYPLENRDASRLLKLNKQTG---EIADYKFTDFIDFINPGDLLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV+ A+L G + ++ + +P + + + ++ G ++
Sbjct: 60 FNNSKVMLARLYGSKT-----TGAKLEYLIERIKTPKLFETHIKANRSPAIGSEIYVEDT 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
A V+DK G + L+ ++ + + G IPLPPY+ KR + D Y
Sbjct: 115 ------LAKVLDK--DGGMYLLEIQGDKDIYQLMEEFGHIPLPPYM--KRDDEEFDAERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GSVAAPTAGLHF+ L+ ++ G+ + ++TLHVG+GTF PV+V+D + H M
Sbjct: 165 QTVYAQDLGSVAAPTAGLHFSKELMQQIKDKGVDIAYITLHVGSGTFKPVQVDDVESHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E+ + Q + K GGR++++GTTS+R LETA ++G I P+ G T+IF+ PG
Sbjct: 225 HAEVISVPVEVCQKIRQTKENGGRVIAIGTTSVRSLETA-GQNGQIEPYQGETDIFLYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F VD +++NFHLPKSTL+MLVSAF E+ K Y+HAI+ YRF+SYGD +F
Sbjct: 284 KKFNVVDAMITNFHLPKSTLIMLVSAFADKEKIIKAYEHAIAERYRFFSYGDAMFIF 340
>gi|161869357|ref|YP_001598524.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis 053442]
gi|189038528|sp|A9M1H2|QUEA_NEIM0 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|161594910|gb|ABX72570.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis 053442]
Length = 346
Score = 435 bits (1118), Expect = e-120, Method: Composition-based stats.
Identities = 153/360 (42%), Positives = 210/360 (58%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P+ + + D + DLP ++ + D +V
Sbjct: 1 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPD----MPLQDRVFGDLPDYVEAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDSHTALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 109 --EGGIRAVMVGR--EGELFCLRFEGGETVYELLEQNGHLPLPPYI--ERAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + TA A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 223 HSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRF VD L++NFHLPKSTLLMLVSAF G+ + Y+HA+ YRF+SYGD +L +
Sbjct: 283 YRFNVVDRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRHAVEREYRFFSYGDAMVLGRNE 342
>gi|260752680|ref|YP_003225573.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
gi|258552043|gb|ACV74989.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
Length = 342
Score = 435 bits (1118), Expect = e-120, Method: Composition-based stats.
Identities = 176/359 (49%), Positives = 229/359 (63%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP IALRP PR+SARL+ V + D+ V+DLP L D ++
Sbjct: 1 MRVDLFDFELPTESIALRPAVPRESARLLQV-----TSQGMDDYHVADLPNLLQEGDLLI 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A L G + + IS + R W + R +K +K DI+ F
Sbjct: 56 FNDTRVIPAYLEGKK------NQARISANMIKREGLRQWQAFVRNAKRLKSDDIVDFGQD 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A V+ + + G +L F + +E + G +PLPPYIA KRP D +D DY
Sbjct: 110 -----VSARVVHRNDDGSVLFEF-LGNEPVEILLERAGNMPLPPYIAHKRPADQQDRQDY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +G+VAAPTA LHFT LL RL G+K VTLHVGAGTF+P+KV+D+DDH+M
Sbjct: 164 QTIFAEKEGAVAAPTASLHFTEELLQRLEEKGVKHTKVTLHVGAGTFLPMKVDDSDDHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE G I A TA +N K +GGR+++ GTTSLRL+E+A E G+++P+S T+IFITPG
Sbjct: 224 HSEWGQISAETANVINETKKQGGRVIATGTTSLRLIESAADETGLVHPFSDETDIFITPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRFR +D LM+NFHLPKSTL MLVSA G E+ YQHAI YRFYSYGD+SLL K
Sbjct: 284 YRFRVIDGLMTNFHLPKSTLFMLVSALMGREKMLAAYQHAIDTGYRFYSYGDSSLLLPK 342
>gi|323136311|ref|ZP_08071393.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylocystis sp. ATCC 49242]
gi|322398385|gb|EFY00905.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylocystis sp. ATCC 49242]
Length = 359
Score = 435 bits (1118), Expect = e-120, Method: Composition-based stats.
Identities = 184/364 (50%), Positives = 237/364 (65%), Gaps = 10/364 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP RIALRP PRDSAR++VV D V DLPA L DA+V
Sbjct: 1 MRVDLFDFELPQDRIALRPANPRDSARMLVVPGK----GAFEDKSVRDLPACLRGGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L+G R + TL R+ + W RP+K + GD++ F +
Sbjct: 57 VNDTRVIHARLSGRRLRGELSAG--VEATLIERLDASRWRALMRPAKKLAIGDLIRFGRE 114
Query: 121 DGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
G+ L+A V + + GE+ L F +SG L+ I + G +PLPPYIA KR DA D
Sbjct: 115 GGEACLQGALDARVEGRGDAGEVTLAFDLSGASLDEAIEVAGEMPLPPYIAGKRAADASD 174
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT +A+ G+VAAPTAGLHFT NLL+ + + G++++ VTLHVGAGTF+PVK +DT
Sbjct: 175 ETDYQTVFAREAGAVAAPTAGLHFTPNLLAAVEARGVQLHRVTLHVGAGTFLPVKADDTG 234
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H MH E ID+ TA ALN ++RGGRIV+VGTT+LR+LE+A DG + P++ T IF
Sbjct: 235 SHRMHEEFARIDSGTAAALNEARARGGRIVAVGTTALRVLESAAAPDGRLAPYAQRTGIF 294
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFRA D+L++NFHLP+STL MLVSAF G+E K Y HAI YRFYSYGD LL
Sbjct: 295 ITPGYRFRATDMLLTNFHLPRSTLFMLVSAFSGLERMKAAYAHAIEDGYRFYSYGDACLL 354
Query: 357 FQKR 360
+
Sbjct: 355 HRAE 358
>gi|109897552|ref|YP_660807.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Pseudoalteromonas atlantica T6c]
gi|123361096|sp|Q15WI5|QUEA_PSEA6 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|109699833|gb|ABG39753.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Pseudoalteromonas atlantica T6c]
Length = 346
Score = 435 bits (1118), Expect = e-120, Method: Composition-based stats.
Identities = 132/364 (36%), Positives = 201/364 (55%), Gaps = 23/364 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V EF FDLP + IA P R ++RLM + +S +D+ +N D ++
Sbjct: 1 MKVSEFQFDLPEALIARYPTKERTASRLMHL-----ATTGLSHLQFTDVVNLINPGDLLI 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K+G L
Sbjct: 56 FNNTRVIPARLLGQKAS-----GGKVEVLIERIIDEHHVLAHVRASKSPKEGTQLLL--- 107
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++E ++ + + + + ++ + + G +PLPPYI RP + D Y
Sbjct: 108 --EGKVEMEMVGRQDA--LFTLKLLNPEPILEILEQYGHMPLPPYI--DRPDEESDKERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF +L +L G+ FVTLHVGAGTF PV+V++ +H M
Sbjct: 162 QTVYNEKPGAVAAPTAGLHFDDVILKQLRDKGVNTEFVTLHVGAGTFQPVRVDNILEHQM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT---EDGI-INPWSGFTNIF 296
HSE + A+ K+ G R+++VGTTS+R LE+A E+G + + T+IF
Sbjct: 222 HSEYAEVPQNVVDAIAKTKTAGKRVIAVGTTSVRSLESAAKAALENGTALASFFSDTDIF 281
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+F+ +D +++NFHL +STL+MLVSAF G E YQ AI+ YRF+SYGD +
Sbjct: 282 IYPGYKFQVIDAMLTNFHLSESTLIMLVSAFAGKENVMNAYQEAIAQQYRFFSYGDAMFI 341
Query: 357 FQKR 360
+ +
Sbjct: 342 EKNQ 345
>gi|319786810|ref|YP_004146285.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Pseudoxanthomonas suwonensis 11-1]
gi|317465322|gb|ADV27054.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Pseudoxanthomonas suwonensis 11-1]
Length = 343
Score = 435 bits (1118), Expect = e-120, Method: Composition-based stats.
Identities = 148/357 (41%), Positives = 205/357 (57%), Gaps = 18/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R ++R++VV P +D V DLP L D +V
Sbjct: 1 MKKSDFHYDLPEELIAQAPLAERSASRMLVVPPGEG---EFADMHVRDLPELLQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + V R SK + G +
Sbjct: 58 FNDTRVIPARLFGQKES-----GGRVEILIERLLPDAQARVQMRASKSPRPGSRIVL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+A V+ + + ++ F + LE+ ++ VG +PLPPYI R+ DA D Y
Sbjct: 110 --DGGGQAEVVGR-DDAFFVVRFELD-EPLEQWLARVGRLPLPPYIQRQ--PDAADAERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF LL RL G++ VTLHVGAGTF PV+VED +H M
Sbjct: 164 QTVFAREVGAVAAPTAGLHFDHALLQRLRERGVEFGHVTLHVGAGTFQPVRVEDVREHTM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A + ++ GGR+++VGTT +R LE+A DG + P++G T IFI PG
Sbjct: 224 HSEWLNVGAELVAQIRRTRAAGGRVIAVGTTVVRALESAMR-DGQLQPFAGETRIFIFPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YR R+VD L++NFHLP+STLLMLVSAF G E Y+HA+ YRF+SYGD LL+
Sbjct: 283 YRIRSVDALVTNFHLPESTLLMLVSAFAGQERIFAAYRHAVEQRYRFFSYGDAMLLW 339
>gi|15677694|ref|NP_274855.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis MC58]
gi|21263921|sp|Q9JXW4|QUEA_NEIMB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|7227116|gb|AAF42193.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis MC58]
Length = 346
Score = 435 bits (1118), Expect = e-120, Method: Composition-based stats.
Identities = 153/360 (42%), Positives = 209/360 (58%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P+ + + D + DLP ++ + D +V
Sbjct: 1 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPD----MPLQDRVFGDLPDYVEAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A + + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 109 --EGGIRAVTVGR--EGELFCLRFEGGETVYELLEQNGHLPLPPYI--ERAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLHRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + TA A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 223 HSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRF VD L++NFHLPKSTLLMLVSAF G+ + Y+HA+ YRF+SYGD +L +
Sbjct: 283 YRFNVVDRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRHAVEREYRFFSYGDAMVLGRNE 342
>gi|227537334|ref|ZP_03967383.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sphingobacterium spiritivorum ATCC 33300]
gi|300769814|ref|ZP_07079694.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sphingobacterium spiritivorum ATCC 33861]
gi|227242837|gb|EEI92852.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sphingobacterium spiritivorum ATCC 33300]
gi|300763265|gb|EFK60081.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sphingobacterium spiritivorum ATCC 33861]
Length = 349
Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats.
Identities = 134/361 (37%), Positives = 192/361 (53%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP S +A P RD ARLMV+H + I + D+ + + D ++
Sbjct: 1 MKLSQFKFNLPESLLASEPSEQRDEARLMVLHRDSGK---IEHKIFKDVLDYFDDKDVMI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
NNTKV A++ G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 LNNTKVFPARMYGNK----EKTGATIEVFLLRELNKELRLWDVLVDPARKIRVGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D L A V+D + + F G E R I ++G PLP YI RK D
Sbjct: 114 DDD---LLVAEVVDNTTSRGRTIRFLFDGTDEEFRRNIEILGETPLPKYIKRK--ATPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ L+ RL G+ VTLHVG GTF V+VED
Sbjct: 169 KYRYQTIYAKNEGAVAAPTAGLHFSRELMKRLELKGVDFAEVTLHVGLGTFRTVEVEDLT 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I A+ +N R+ +VGTTS+R +E++ + D + S +T+ F
Sbjct: 229 KHKMDSEQFIITEEAARIVNKGIDNKRRVCAVGTTSMRAIESSVSADRHLKAASDWTSKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH P+STLL++++AF G E Y+ A+ YRFYSYGD L+
Sbjct: 289 IYPPYDFSIANSMITNFHTPESTLLVMIAAFAGYENVMNAYEVAVKEKYRFYSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|253583344|ref|ZP_04860542.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
[Fusobacterium varium ATCC 27725]
gi|251833916|gb|EES62479.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
[Fusobacterium varium ATCC 27725]
Length = 343
Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats.
Identities = 135/356 (37%), Positives = 196/356 (55%), Gaps = 16/356 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ ++D++LP I +P PRD ARLM+V+ I ++ +LN D +V
Sbjct: 4 LLSDYDYNLPEELIGQQPREPRDHARLMLVNRKNES---IEHKKFYEIIDYLNEGDILVR 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKVI A+L G + + L R+ ++W +P+K +K G L +
Sbjct: 61 NSTKVIPARLFGHKE-----TGGVLEILLIKRIDLDTWECLLKPAKKLKIGQKLFIGHGN 115
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
L +++ + G ++ F+ G E + +G +PLPPYI ++ YQ
Sbjct: 116 ---ELIGELLEIKDDGNRIIKFTYEG-AFEEVLDRLGKMPLPPYIVEA----LKEKDRYQ 167
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YA SVAAPTAGLHFT LL ++ GIK+ + L VG GTF PV+ E+ +H MH
Sbjct: 168 TVYAIKGESVAAPTAGLHFTKELLEKIEKKGIKIVDIFLEVGLGTFRPVQTENVLEHKMH 227
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E+ I A +N K G RI+SVGTTS R LE+A E+G++ G T IFI PGY
Sbjct: 228 EEVFEIPQEAADIINEGKRNGRRIISVGTTSTRALESAVDENGMVKAQKGSTEIFIYPGY 287
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F+ +D L++NFHLPKSTLLMLVSA E K+Y A+ Y F+S+GD ++
Sbjct: 288 KFKVIDALITNFHLPKSTLLMLVSALSSREFMLKVYDIAVKEEYHFFSFGDAMFIY 343
>gi|52425613|ref|YP_088750.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Mannheimia
succiniciproducens MBEL55E]
gi|81609463|sp|Q65S95|QUEA_MANSM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|52307665|gb|AAU38165.1| QueA protein [Mannheimia succiniciproducens MBEL55E]
Length = 363
Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats.
Identities = 139/365 (38%), Positives = 201/365 (55%), Gaps = 17/365 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F FDLP IA P R S+ + IS H SD+ +N D ++
Sbjct: 1 MHLSDFYFDLPDELIARYPKPERSSS---RLLRLSGENGDISHHTFSDVYDLINEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + ++ + + + R SK K G L
Sbjct: 58 FNNTRVIPARMYGRKAS-----GGKIEVLIERVLTESRFLAHVRSSKAPKAGTELILGED 112
Query: 121 D-GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G+ + V+ L + L + +G +PLPPYI RP + D
Sbjct: 113 KLGEGKGVKAVMIGRQDALFELEITEKSTALLDILQKIGHMPLPPYI--DRPDEDADQER 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y+KI G+VAAPTAGLHF LL++L + G+ FVTLHVGAGTF PV+V + ++H
Sbjct: 171 YQTVYSKIPGAVAAPTAGLHFDEELLAKLKAKGVNFAFVTLHVGAGTFQPVRVNNIEEHH 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET---ATTEDG---IINPWSGFT 293
MH+E + A+ + K+ G R+++VGTTS+R +E+ A E G II P+ T
Sbjct: 231 MHAEYVEVPQQVVDAIVATKAAGKRVIAVGTTSVRSVESAALAAQEKGFAQIIEPFFADT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG +FR VD L++NFHLP+STL+MLVSAF G + T Y+ A+ + YRF+SYGD
Sbjct: 291 SIFIYPGKQFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKSAVENRYRFFSYGDA 350
Query: 354 SLLFQ 358
+ +
Sbjct: 351 MFITK 355
>gi|86134467|ref|ZP_01053049.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase
[Polaribacter sp. MED152]
gi|85821330|gb|EAQ42477.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase
[Polaribacter sp. MED152]
Length = 349
Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats.
Identities = 127/361 (35%), Positives = 189/361 (52%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF+LP +A P RD +RLMV++ I D+ + + D ++
Sbjct: 1 MKLSNFDFELPEELLAKYPAEHRDESRLMVLNRK---EQTIEHKTFKDVINYFDEGDVLM 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV--SPNSWSVYARPSKVIKKGDILHFF 118
NNTKV A++ G + + I L + W V P++ I+ G+ L F
Sbjct: 58 LNNTKVFPARMYGNK----EKTGARIEVFLLRELNAENRLWDVLVDPARKIRIGNKLFFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D L A VID + L F G ++ +G PLP + R ++ D
Sbjct: 114 EDD---SLVAEVIDNTTSRGRTLRFLFDGSYEAFREKLLELGETPLPR--SVNREVEELD 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT +AK +G+VAAPTAGLHF+ +LL RL G+ +TLHVG GTF PV+VED
Sbjct: 169 EERYQTIFAKNEGAVAAPTAGLHFSKHLLKRLEIKGVDFAEMTLHVGLGTFSPVEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I A A +N K+ R+ +VGTT +R +E++ + + +NP+ G+TN F
Sbjct: 229 KHKMDSEQIVIPANAADKINKAKAEKRRVCAVGTTVMRTVESSVSSNAQLNPFEGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH PKSTL+M +AF G + + Y+ A+ Y+F +YGD ++
Sbjct: 289 IFPPYEFSIANSMITNFHPPKSTLMMQAAAFAGYDFLMEAYKTAVKEGYKFSTYGDAMII 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|254786638|ref|YP_003074067.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Teredinibacter turnerae T7901]
gi|237683820|gb|ACR11084.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Teredinibacter turnerae T7901]
Length = 359
Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats.
Identities = 139/358 (38%), Positives = 195/358 (54%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F + LP IA P R ++RL+V+ + + L +NS D +V
Sbjct: 1 MRRQDFFYSLPDELIARYPTQDRTASRLLVLDGASG---EVEHSQFASLLERVNSGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + +I + + + + R SK K G IL
Sbjct: 58 FNDTRVIPARLFGKK-----STGGQIEILVERVLDSHRVYAHVRSSKSPKAGAILVLEDG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
V G + + + +G +PLPPYI R +A+D Y
Sbjct: 113 T-------EVTMTAREGALFTLEFPRHASALEVMERIGHMPLPPYI--DRADEAQDKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y K +G+VAAPTAGLHF LL L + G++V FVTLHVGAGTF PV+ ++ DH M
Sbjct: 164 QTVYGKNKGAVAAPTAGLHFDDALLEALKAKGVEVAFVTLHVGAGTFQPVRADNIRDHEM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE+ ++D ++ + K RGGR+++VGTTS+R LE+A G + P+ G TNIFI P
Sbjct: 224 HSEVMWVDQAVCDSVAATKVRGGRVIAVGTTSVRCLESAAAS-GHLQPYQGDTNIFIYPS 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y FR VD L++NFHLP+STLLML+SAF G T Y A+ YRF+SYGD + +
Sbjct: 283 YEFRVVDALVTNFHLPESTLLMLISAFAGYTNTMNAYAQAVQEKYRFFSYGDAMFVTR 340
>gi|187930024|ref|YP_001900511.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ralstonia
pickettii 12J]
gi|238691819|sp|B2UC74|QUEA_RALPJ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|187726914|gb|ACD28079.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Ralstonia
pickettii 12J]
Length = 359
Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats.
Identities = 151/358 (42%), Positives = 211/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FDFDLPP IA + R ++RL+ V + D +DL +L D +V
Sbjct: 2 LTLSDFDFDLPPELIAQTALPDRTASRLLAVRR-TEDAVHFEDRQFADLVDYLRPGDLLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+ G + ++ + + ++ R SK +G L
Sbjct: 61 FNDTRVIKARFFGHKAS-----GGKVEVLVERLLDEHTVLAQIRSSKSPVEGTSLRLADA 115
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ TV + L F ++L I G +PLPPYI D+ D Y
Sbjct: 116 -----FDVTVGPRAEPF-FTLRFPQPALDL---IEQYGRLPLPPYIEHD--PDSFDETRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF L ++L ++GI+ F+TLHVGAGTF PV+VE+ +H M
Sbjct: 165 QTVYARNPGAVAAPTAGLHFDDALFAKLDAMGIRRGFLTLHVGAGTFQPVRVENIAEHRM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I A+A+ + ++ GGR+++VGTTS+R LE+A DG +N SG T+IFITPG
Sbjct: 225 HSEWYEITPELAEAIRATRAAGGRVIAVGTTSMRALESAAQPDGTLNACSGETDIFITPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRFRAVD+L++NFHLPKSTLLMLVSAF G+ ++ YQHAI+ YRF+SYGD LL +
Sbjct: 285 YRFRAVDLLVTNFHLPKSTLLMLVSAFAGMSAIREAYQHAIAQRYRFFSYGDAMLLTR 342
>gi|160896458|ref|YP_001562040.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Delftia
acidovorans SPH-1]
gi|160362042|gb|ABX33655.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Delftia
acidovorans SPH-1]
Length = 388
Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats.
Identities = 145/366 (39%), Positives = 203/366 (55%), Gaps = 21/366 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LP + IA P R ++RL+ + + P +D + +LP L D +VFN
Sbjct: 32 LSDFDFELPENLIAQHPAAQRSASRLLDGRDDATPP---TDRIFHELPDLLQPGDLLVFN 88
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+V+ A++ G + + + + N + R SK G +H
Sbjct: 89 DTRVLKARIFGEKAS-----GGRLELLVERVLEGNDVVAHMRVSKKPLPGSRIHLCGGKN 143
Query: 123 QSRLEATVIDKW-NTGEILLVFSISGIELE---RQISLVGTIPLPPYIARK-----RPID 173
+ +A + +W + L S G E + G +PLPPYI R P
Sbjct: 144 RGGFDAVLRGRWPDENGPLFHLSFEGPRGETPHELMERFGHLPLPPYIERHQDTGNDPDA 203
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
A D YQT +A G+VAAPTA LHF +L+RL GI+ VTLHVGAGTF PVK E
Sbjct: 204 AEDSERYQTVFAARPGAVAAPTAALHFDDAVLARLAERGIERASVTLHVGAGTFQPVKTE 263
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
+ DH MHSE I T AL + RGGR+V+VGTT++R LE+ +SG T
Sbjct: 264 NLADHQMHSEWYEIPLATLAALERCRQRGGRVVAVGTTTVRTLESWAQTG----QFSGDT 319
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFITPG+ ++ VD+L++NFHLPKSTL+MLVSAF G E+ +Y+HAI+ YRF+SYGD+
Sbjct: 320 RIFITPGFEYQVVDLLITNFHLPKSTLMMLVSAFAGYEQVMALYRHAIAQEYRFFSYGDS 379
Query: 354 SLLFQK 359
LL +K
Sbjct: 380 MLLKKK 385
>gi|226939526|ref|YP_002794599.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Laribacter
hongkongensis HLHK9]
gi|226714453|gb|ACO73591.1| QueA [Laribacter hongkongensis HLHK9]
Length = 380
Score = 434 bits (1117), Expect = e-119, Method: Composition-based stats.
Identities = 151/359 (42%), Positives = 210/359 (58%), Gaps = 20/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+ LP IA P R ++RL+ V P ++D +DLP L+ +D +V
Sbjct: 38 MQLSDFDYHLPEHLIAQFPPAERGNSRLLHV-----SPAGLADLQFADLPGLLSPDDLLV 92
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G + + + + + + R SK K G L F
Sbjct: 93 VNDTRVIKARLFGRKAS-----GGAVEALVERVLDERTALAHVRASKSPKPGSRLVFAD- 146
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
R EA ++++ GE+ L+ + + G +PLPPYI R + D Y
Sbjct: 147 ----RWEAEMVER--QGELFLLRFPGDTSVLDILDAAGHLPLPPYITRSAGDN--DDERY 198
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ QG+VAAPTAGLHFT L++ + + GI V VTLHVGAGTF PV+V++ +H M
Sbjct: 199 QTIYAREQGAVAAPTAGLHFTDGLMAAIRARGIDVARVTLHVGAGTFQPVRVDNIAEHKM 258
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I T A+ + ++RGGR+V+VGTTS+R LE A + G + T+IFITPG
Sbjct: 259 HSERFVIPQATVDAIAACRARGGRVVAVGTTSMRALE-AGAQSGELRAGPSETDIFITPG 317
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRFR VD L++NFHLPKSTL+MLVSAF G E + Y+HAI YRF+SYGD LL ++
Sbjct: 318 YRFRVVDRLVTNFHLPKSTLMMLVSAFAGTETIRAAYRHAIERQYRFFSYGDAMLLERQ 376
>gi|241668246|ref|ZP_04755824.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
philomiragia subsp. philomiragia ATCC 25015]
gi|254876780|ref|ZP_05249490.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
philomiragia subsp. philomiragia ATCC 25015]
gi|254842801|gb|EET21215.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
philomiragia subsp. philomiragia ATCC 25015]
Length = 338
Score = 434 bits (1117), Expect = e-119, Method: Composition-based stats.
Identities = 135/357 (37%), Positives = 209/357 (58%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LP IA P+ RD++RL+ ++ I DH +D F+N D ++
Sbjct: 1 MRTDDFDYKLPEELIASYPLENRDASRLLKLNKQTG---EILDHKFTDFIDFINPEDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV+ A+L G + ++ + +P + + + ++ G ++
Sbjct: 58 FNNSKVMLARLYGEKT-----TGAKLEYLIERVKTPKIFETHIKANRSPAIGSEIYVQDT 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
A V++K G + L+ ++ + + G IPLPPY+ KR + D Y
Sbjct: 113 ------LAKVLEK--DGGMYLLELQGNKDIYQLMEEFGHIPLPPYM--KRDDEEFDAERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GSVAAPTAGLHF+ L+ ++ + G + ++TLHVG+GTF PV+V+D ++H M
Sbjct: 163 QTVYAKDLGSVAAPTAGLHFSEELMQQIKAKGTDIAYITLHVGSGTFKPVQVDDVNNHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE+ + + + K+ GGR++++GTTS+R LETA + G I P+ G T+IF+ PG
Sbjct: 223 HSEVISVSEDVCEKIRQTKANGGRVIAIGTTSVRSLETA-GQSGEIQPYQGETDIFLYPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F VD +++NFHLPKSTL+MLVSAF E+ K Y+HAI+ YRF+SYGD +F
Sbjct: 282 KKFNIVDAMITNFHLPKSTLIMLVSAFADKEKIMKAYEHAIAEKYRFFSYGDAMFIF 338
>gi|144900483|emb|CAM77347.1| Queuosine biosynthesis protein [Magnetospirillum gryphiswaldense
MSR-1]
Length = 345
Score = 434 bits (1116), Expect = e-119, Method: Composition-based stats.
Identities = 180/359 (50%), Positives = 236/359 (65%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP + IA RPV PRD+ARL+ V ++D +V DLP +L D ++
Sbjct: 1 MDVNLFDFDLPRTLIAERPVSPRDAARLLHVQAGG-----LTDGVVGDLPRWLRPGDLLI 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G + E I TLH R S + W +ARP+K ++ GD + F
Sbjct: 56 SNDTRVIPARLFGRK------GEGGIELTLHERTSLDEWKAFARPAKKLRPGDEVRFADD 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
ATV K GE+L+ F G +L + G +PLPPYI RK D RD DY
Sbjct: 110 -----FSATVAAKGEAGEVLMRFDRGGDDLMLALDAYGRLPLPPYI-RKGEADERDRADY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +G+VAAPTAGLHFT LL+ L S G+ +TLHVGAGTF+PVKV+DT DH M
Sbjct: 164 QTVFAREKGAVAAPTAGLHFTDALLTALESAGVTRTTITLHVGAGTFLPVKVDDTKDHRM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G + A A +N K+ GGR+V+VGTTSLRLLE+A +DG+++P+ G T+IFITPG
Sbjct: 224 HAERGVVTAEVADLVNRTKAAGGRVVAVGTTSLRLLESAADDDGVLHPFDGPTDIFITPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRFR VD+LM+NFHLPKSTL MLVSAF G++ + Y +A++ YRFYSYGD LL ++
Sbjct: 284 YRFRLVDVLMTNFHLPKSTLFMLVSAFAGLDRMHQAYAYAMNRGYRFYSYGDACLLERE 342
>gi|328543843|ref|YP_004303952.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Polymorphum gilvum SL003B-26A1]
gi|326413587|gb|ADZ70650.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Polymorphum gilvum SL003B-26A1]
Length = 365
Score = 434 bits (1116), Expect = e-119, Method: Composition-based stats.
Identities = 192/361 (53%), Positives = 245/361 (67%), Gaps = 7/361 (1%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLPP RIALRP PRD+ARL+VV P ++D V DL L DA+V
Sbjct: 1 MRVDVFDFDLPPERIALRPARPRDAARLLVVRP--GQSPELADCGVRDLARELEPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI AQL G R I TLH+R + W + RP+K + GD + F +
Sbjct: 59 FNDTRVIPAQLEGTRTRGEAVAG--IGATLHLRAGADRWWAFVRPAKKLAVGDRVRFGGE 116
Query: 121 DGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
L+ATV DK ++GE+LL F ++G +L++ I+ VG IPLPPYIA +R D +D
Sbjct: 117 GRACLLGTLDATVADKRDSGEVLLAFDLAGPDLDQAIAAVGHIPLPPYIAARRGEDEQDR 176
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT +A G+VAAPTAGLHFT L+ L + GI+ + VTLHVGAGTF+PVK EDT D
Sbjct: 177 SDYQTMFADKDGAVAAPTAGLHFTPALIEALDARGIERHTVTLHVGAGTFLPVKAEDTAD 236
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+E G + A TA AL +V++RG R+V+VGTTSLR+LE+A + +SG T+IFI
Sbjct: 237 HRMHAEWGKVSAATAAALKAVRARGNRVVAVGTTSLRILESAAQGADGLTAFSGETSIFI 296
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFRAVD+LM+NFHLP+STL MLVSAF G++ ++ Y HAI+ YRFYSYGD LLF
Sbjct: 297 TPGYRFRAVDVLMTNFHLPRSTLFMLVSAFSGLQTMRRAYAHAIASGYRFYSYGDACLLF 356
Query: 358 Q 358
Sbjct: 357 P 357
>gi|325143754|gb|EGC66071.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis M01-240013]
Length = 356
Score = 434 bits (1116), Expect = e-119, Method: Composition-based stats.
Identities = 151/360 (41%), Positives = 207/360 (57%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P+ + + D + DL ++ D +V
Sbjct: 11 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPD----MPLQDRVFGDLSDYVGEGDVLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 67 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 119 --EGGIRAVMVGR--EGELFCLRFEGGQTVYELLEQNGHLPLPPYI--ERAADADDDSRY 172
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+VE ++H M
Sbjct: 173 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVEKIEEHKM 232
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + TA A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 233 HSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 292
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRF D L++NFHLPKSTLLMLVSAF G+ + Y++A+ YRF+SYGD +L +
Sbjct: 293 YRFNVADRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGDAMVLGRNE 352
>gi|217076403|ref|YP_002334119.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Thermosipho
africanus TCF52B]
gi|226736744|sp|B7IFB4|QUEA_THEAB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|217036256|gb|ACJ74778.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Thermosipho
africanus TCF52B]
Length = 335
Score = 434 bits (1116), Expect = e-119, Method: Composition-based stats.
Identities = 137/357 (38%), Positives = 193/357 (54%), Gaps = 22/357 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+ LP IA P PRDS+RLMV++ I + D+ +L D +V
Sbjct: 1 MKLSDFDYYLPEELIAQTPAEPRDSSRLMVLNRK---EKTIEHRIFRDIVEYLKPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKVI A+L GV+ + L ++S W +P +KKG +
Sbjct: 58 RNITKVIPARLYGVKE-----TGARVEILLLEKISEGVWEALVKPGSKVKKGTKIILSEG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+E D G +L F+ S + ++ +G PLPPYI ++ + Y
Sbjct: 113 -----VEVICKDYSQQGARILEFNCS----DDKLFELGNAPLPPYIKNQKVP----FERY 159
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GSVAAPTAGLHFT LL RL + G++ + LHVG GTF PVKVED +H M
Sbjct: 160 QTVYSKETGSVAAPTAGLHFTEELLERLRNKGLEFADLILHVGLGTFRPVKVEDIREHKM 219
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A T + + + GRI++VGTTS+R LET + G T+IFI P
Sbjct: 220 HSERYYVPAETVKKIRETRKNKGRIIAVGTTSVRTLETIARLPNQ-ESYHGKTDIFIYPP 278
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+ D +++NFHLPKSTLLMLV+AF G + + Y A+ YRF+S GD ++
Sbjct: 279 FEFKLTDAIITNFHLPKSTLLMLVAAFAGKDFILEAYNTAVKMKYRFFSLGDACFIY 335
>gi|166368637|ref|YP_001660910.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Microcystis
aeruginosa NIES-843]
gi|166091010|dbj|BAG05718.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Microcystis
aeruginosa NIES-843]
Length = 369
Score = 434 bits (1116), Expect = e-119, Method: Composition-based stats.
Identities = 148/366 (40%), Positives = 200/366 (54%), Gaps = 22/366 (6%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D+ LPP IA P RDS+RL+VV S L I DLP +L S D +VF
Sbjct: 10 LLSSYDYHLPPELIAQNPAETRDSSRLLVVDSPNSHNLAI----FRDLPTWLESGDLLVF 65
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS-- 119
N+T+VI A+L G + + L + W +P K K G + F+
Sbjct: 66 NDTRVIPARLFGRKT-----TGAPVEILLLEEQDDHRWLSLVKPGKRFKVGSEVLFYPKT 120
Query: 120 ---QDGQSRLEATVIDK-WNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDA 174
+D + A VID+ NTG LL F + G IP PPY+ +
Sbjct: 121 GPTEDQEKLWLAKVIDRDLNTGGRLLQFQRHPRRSFWDMLEEYGHIPFPPYVTESEAEED 180
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
YQT YA QGSVAAPTAGLHFT L +L GI ++TLHVG GTF PV+VE+
Sbjct: 181 ----RYQTVYADKQGSVAAPTAGLHFTPELFHKLAQKGIDTAYITLHVGVGTFRPVEVEN 236
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDG--IINPWSGF 292
+H+MH E I A TA+ + K+RGGR+++VGTT R LE A E + + G
Sbjct: 237 ITEHLMHQEFLQISAETAEKIAQTKARGGRVIAVGTTVARALEGAIKESKSEKLTAFQGK 296
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
TN+F+ PGY++R +D +++NFHLPKS+L+MLVSA G E +YQ AI +RFYS+GD
Sbjct: 297 TNLFVYPGYQWRVIDGMITNFHLPKSSLMMLVSALIGRERLLALYQEAIQEHFRFYSFGD 356
Query: 353 TSLLFQ 358
L+
Sbjct: 357 AMLILP 362
>gi|325141611|gb|EGC64075.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis 961-5945]
gi|325197642|gb|ADY93098.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis G2136]
Length = 346
Score = 433 bits (1115), Expect = e-119, Method: Composition-based stats.
Identities = 152/356 (42%), Positives = 208/356 (58%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P+ + + D + DLP ++ + D +V
Sbjct: 1 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPD----MPLQDRVFGDLPDYVEAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A + + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 109 --EGGIRAVTVGR--EGELFCLRFEGGQTVYELLEQNGHLPLPPYI--ERAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + TA A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 223 HSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF VD L++NFHLPKSTLLMLVSAF G+ + Y++A+ YRF+SYGD +L
Sbjct: 283 YRFNVVDRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGDAMVL 338
>gi|163742741|ref|ZP_02150126.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Phaeobacter
gallaeciensis 2.10]
gi|161383996|gb|EDQ08380.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Phaeobacter
gallaeciensis 2.10]
Length = 356
Score = 433 bits (1115), Expect = e-119, Method: Composition-based stats.
Identities = 165/360 (45%), Positives = 227/360 (63%), Gaps = 14/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP RIA RP PR SARL+V + I D V++L +L S D +V
Sbjct: 1 MKLSDFDFDLPDDRIATRPAVPRSSARLLVAEGDR-----IRDARVANLGQWLRSGDRLV 55
Query: 61 FNNTKVITAQLNGVRF--CHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+L+G+R ++ TL + SW+ +P K +K G+ + F
Sbjct: 56 LNDTKVIPARLSGLRHRDTAQGPMAAKVEVTLLDPGADGSWAALLKPLKKVKPGEEIVFS 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
L AT +++ G+ L F++SG + + ++ G +PLPPYIA KRP D +D
Sbjct: 116 DA-----LSAT-LERVEDGQGHLKFNLSGTDFDAALAEAGAMPLPPYIAAKRPADEQDKT 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LL+ L + G+++ +VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVWARNSGAVAAPTASLHFDDALLAELQAKGVEISYVTLHVGAGTFLPVKVEDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A A + + K+ GGR++ VGTT+LRL+E+A + G I PW G T+IFI
Sbjct: 230 RMHAEWGRVSAEAATEIAATKAAGGRVIPVGTTALRLIESA-GQSGAIQPWEGDTDIFIY 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ F D LM+NFHLPKSTLLMLVSA G + + +Y HA++ YRF+SYGD SLL
Sbjct: 289 PGFTFHVADALMTNFHLPKSTLLMLVSALMGQDRIRAIYDHALAEEYRFFSYGDASLLIP 348
>gi|87200264|ref|YP_497521.1| queuosine biosynthesis protein [Novosphingobium aromaticivorans DSM
12444]
gi|123488975|sp|Q2G636|QUEA_NOVAD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|87135945|gb|ABD26687.1| Queuosine biosynthesis protein [Novosphingobium aromaticivorans DSM
12444]
Length = 342
Score = 433 bits (1115), Expect = e-119, Method: Composition-based stats.
Identities = 177/358 (49%), Positives = 227/358 (63%), Gaps = 16/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP IALRP PRDSARL+ + D +V DLP LN D +V
Sbjct: 1 MRVDLFDFELPSENIALRPARPRDSARLL----GVGRDGPFRDLIVRDLPDLLNPGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI AQL G R E + TLH R+ W + R +K +++GD++ F +
Sbjct: 57 FNDTRVIPAQLEGQR------GEARVGATLHKRIDLRRWQAFVRNAKRLREGDVIQFGAG 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ AT + G L F +E + G +PLPPYIA KRP D +D DY
Sbjct: 111 -----VTATAEMRLPDGSWTLFFPGE-EPVEVLLERAGRMPLPPYIAGKRPTDEQDREDY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A G+VAAPTA LHFT +L+ L + G+ +TLHVGAGTF+PVK +DT DH M
Sbjct: 165 QTMFAAKDGAVAAPTAALHFTPSLMEALAARGVATETLTLHVGAGTFLPVKADDTQDHQM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G IDA TA LN+ ++ G R+++VGTTSLRLLE+AT ED +I P+ G T+IFITPG
Sbjct: 225 HAEWGTIDAATADRLNAARAAGKRVIAVGTTSLRLLESATGEDRVIRPFEGDTSIFITPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y FRA+D LM+NFHLPKSTL MLVSA G++ + Y HAI+ YRFYSYGD+SLL
Sbjct: 285 YTFRAIDGLMTNFHLPKSTLFMLVSALMGLDRMQAAYAHAIAGGYRFYSYGDSSLLLP 342
>gi|225011595|ref|ZP_03702033.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Flavobacteria bacterium MS024-2A]
gi|225004098|gb|EEG42070.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Flavobacteria bacterium MS024-2A]
Length = 349
Score = 433 bits (1115), Expect = e-119, Method: Composition-based stats.
Identities = 143/361 (39%), Positives = 199/361 (55%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F F+LP + +A RP RD +RLMV++ I H D+ + + D +V
Sbjct: 1 MKLSNFQFELPNALLAQRPAADRDESRLMVLNRK---EETIEHHSFKDVINYFDEGDVMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 LNNTKVFPARLFGNK----EKTGARIEVFLLRELNQEQRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
+ L A VID + L F G E ++ +G PLP YI KRPI+ D
Sbjct: 114 EDE---SLVAEVIDNTTSRGRTLRFLFDGSYAEFRTKLKELGQTPLPKYI--KRPIEEED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAPTAGLHF+ +LL RL GI + +TLHVG GTF PV+VED
Sbjct: 169 QERYQTIYAKHEGAVAAPTAGLHFSKHLLKRLEIKGIDLAELTLHVGLGTFSPVEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE IDA +N+ + RI +VGTT +R LE++ + G++N + G+T+ F
Sbjct: 229 KHKMDSEELIIDAIAVAKVNNALATKKRICAVGTTVMRGLESSVSSAGLLNEYQGWTHKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH PKSTLLM++SAF + K Y+ AI Y FYSYGD L+
Sbjct: 289 IFPPYDFSIANCMITNFHTPKSTLLMMISAFADPDFIKHAYKVAIKEKYNFYSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|167627673|ref|YP_001678173.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
philomiragia subsp. philomiragia ATCC 25017]
gi|189038523|sp|B0TYS6|QUEA_FRAP2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|167597674|gb|ABZ87672.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
philomiragia subsp. philomiragia ATCC 25017]
Length = 338
Score = 433 bits (1115), Expect = e-119, Method: Composition-based stats.
Identities = 134/357 (37%), Positives = 209/357 (58%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LP IA P+ RD++RL+ ++ I DH +D F+N D ++
Sbjct: 1 MRTDDFDYKLPEELIASYPLENRDASRLLKLNKQTG---EILDHKFTDFIDFINPEDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV+ A+L G + ++ + +P + + + ++ G ++
Sbjct: 58 FNNSKVMLARLYGEKI-----TGAKLEYLIERVKTPKIFETHIKANRSPAIGSEIYVQDT 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
A +++K G + L+ ++ + + G IPLPPY+ KR + D Y
Sbjct: 113 ------LAKILEK--DGGMYLLELQGNKDIYQLMEEFGHIPLPPYM--KRDDEEFDAERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GSVAAPTAGLHF+ L+ ++ + G + ++TLHVG+GTF PV+V+D ++H M
Sbjct: 163 QTVYAKDLGSVAAPTAGLHFSEELMQQIKAKGTDIAYITLHVGSGTFKPVQVDDVNNHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE+ + + + K+ GGR++++GTTS+R LETA + G I P+ G T+IF+ PG
Sbjct: 223 HSEVISVSEDVCEKIRQTKANGGRVIAIGTTSVRSLETA-GQSGEIQPYQGETDIFLYPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F VD +++NFHLPKSTL+MLVSAF E+ K Y+HAI+ YRF+SYGD +F
Sbjct: 282 KKFNIVDAMITNFHLPKSTLIMLVSAFADKEKIMKAYEHAIAEKYRFFSYGDAMFIF 338
>gi|303256878|ref|ZP_07342892.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderiales bacterium 1_1_47]
gi|302860369|gb|EFL83446.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderiales bacterium 1_1_47]
Length = 354
Score = 433 bits (1115), Expect = e-119, Method: Composition-based stats.
Identities = 146/360 (40%), Positives = 196/360 (54%), Gaps = 17/360 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDF+LP S IA P+ R ++RL+ V P+ S + D D+ L D +VF
Sbjct: 7 HLSDFDFELPESLIAQYPLKDRAASRLLHVKPDGS----VEDLHFRDILNLLKPGDLLVF 62
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNTKVI A+LNG + R SK K G IL+F +
Sbjct: 63 NNTKVIKARLNGKKE-----TGGVFEAMTERVTGTYEAISMMRASKAAKPGTILYFDHPE 117
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G+ A V+ + L + + G +PLPPYI + D YQ
Sbjct: 118 GKEPARAEVLGREGEFFRLRFDH----PVLEVLDEYGKVPLPPYIQH--AAEKSDESRYQ 171
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YAK G+VAAPTAGLHFT LL ++ G + FVTLHVGAGTF PV+VE+ +H+MH
Sbjct: 172 TVYAKYPGAVAAPTAGLHFTDELLQQIRDKGCEEVFVTLHVGAGTFQPVRVENLSEHVMH 231
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED--GIINPWSGFTNIFITP 299
SE I A+ +N K+ R+V VGTTSLR +E + +++ G + S T +FI P
Sbjct: 232 SEWYSISPEAAEKINKAKTERRRVVCVGTTSLRTVEASASQNPEGKVRAESADTRLFINP 291
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY F+ D +++NFHLPKSTL+MLVSA CG +E Y+HA+ YRF+SYGD L QK
Sbjct: 292 GYEFKVCDAMVTNFHLPKSTLVMLVSALCGRDEILSAYKHAVDEKYRFFSYGDACFLEQK 351
>gi|159043729|ref|YP_001532523.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Dinoroseobacter shibae DFL 12]
gi|189038520|sp|A8LI68|QUEA_DINSH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|157911489|gb|ABV92922.1| queuosine biosynthesis protein [Dinoroseobacter shibae DFL 12]
Length = 353
Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats.
Identities = 165/362 (45%), Positives = 220/362 (60%), Gaps = 13/362 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP + IA RP PR SARL+V D V+DL L D +V
Sbjct: 1 MHLSDFDFDLPETLIATRPARPRSSARLLVAE----ARGPFRDRRVTDLVDELQPGDRLV 56
Query: 61 FNNTKVITAQLNGVRF--CHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
NNTKVI A+L G R ++ TL S W+ A+P + + +G+ + F
Sbjct: 57 LNNTKVIPARLFGTRHRDSAQGPVSAKVEITLLEPASEG-WTALAKPLRKLAEGEEIVFS 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
L ATV ++ + LVF+ +G + + ++ G +PLPPYIA KR DA+D
Sbjct: 116 DA-----LRATVAERGAD-RVRLVFNCTGDDFDAALAQAGAMPLPPYIAAKRAADAQDRD 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A +G+VAAPTA LHF LL+ L + G++ FVTLHVGAGTF+PVKV+D H
Sbjct: 170 DYQTVFAARKGAVAAPTASLHFDEALLAALRARGVEFSFVTLHVGAGTFLPVKVDDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE G I A + + ++ G R++ VGTT+LRL+ETA + G PW G T+IFI
Sbjct: 230 KMHSEWGEISDQAAAEILATRADGRRVIPVGTTALRLIETAAAQPGGFGPWEGDTDIFIY 289
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ FR D LM+NFHLPKSTL+MLVSA G E +++Y HAI+ YRF+SYGD+SLL
Sbjct: 290 PGFEFRITDGLMTNFHLPKSTLMMLVSALMGAERIREIYAHAIAQEYRFFSYGDSSLLLP 349
Query: 359 KR 360
R
Sbjct: 350 DR 351
>gi|29654504|ref|NP_820196.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Coxiella
burnetii RSA 493]
gi|153208623|ref|ZP_01946880.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Coxiella
burnetii 'MSU Goat Q177']
gi|154705886|ref|YP_001424643.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Coxiella
burnetii Dugway 5J108-111]
gi|165919024|ref|ZP_02219110.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Coxiella
burnetii RSA 334]
gi|212218626|ref|YP_002305413.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Coxiella
burnetii CbuK_Q154]
gi|46577001|sp|Q83CC6|QUEA_COXBU RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|189038517|sp|A9KFQ4|QUEA_COXBN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|226713835|sp|B6J7L9|QUEA_COXB1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|29541771|gb|AAO90710.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Coxiella
burnetii RSA 493]
gi|120575884|gb|EAX32508.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Coxiella
burnetii 'MSU Goat Q177']
gi|154355172|gb|ABS76634.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Coxiella
burnetii Dugway 5J108-111]
gi|165917279|gb|EDR35883.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Coxiella
burnetii RSA 334]
gi|212012888|gb|ACJ20268.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Coxiella
burnetii CbuK_Q154]
Length = 343
Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats.
Identities = 130/355 (36%), Positives = 193/355 (54%), Gaps = 18/355 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+FD++LP IA RP+ R +RL+ + + +S + + ND +V
Sbjct: 6 KTSDFDYNLPVELIAQRPLADRSGSRLLYIDRSRRT---VSHRQFNGFVEQVKPNDLVVL 62
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKVI A+L G + + ++ C + +S + + + R SK K G +
Sbjct: 63 NDTKVIPARLFGHK-----QTGGKVECLVERILSKDRFLAHIRASKAPKLGSQIIIADN- 116
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ + ++N ++ S + + + G IPLPPYI +R D D YQ
Sbjct: 117 ----FKIIIEGRYNDLFECVLHSSA--SILDLLYQHGRIPLPPYI--QREPDKDDQARYQ 168
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A+ G+VAAPTAGLHF L G + +VTLHVGAGTF PV+ + DH MH
Sbjct: 169 TIFAERAGAVAAPTAGLHFNEETFDALRKKGAAITYVTLHVGAGTFQPVRADSLADHRMH 228
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E + A+ + GR+++VGTT +R LETA T++G P++G T++FI PG+
Sbjct: 229 HEWMEVSKAVCDAIAKCRKNNGRVIAVGTTVMRCLETA-TKNGECRPYAGETDLFIYPGF 287
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+F VD L++NFHLPKSTLLMLV AF G E + YQ A+ + YRF+SYGD L+
Sbjct: 288 QFNCVDALLTNFHLPKSTLLMLVCAFGGYELVMEAYQKAVENRYRFFSYGDAMLI 342
>gi|237749372|ref|ZP_04579852.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Oxalobacter
formigenes OXCC13]
gi|229380734|gb|EEO30825.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Oxalobacter
formigenes OXCC13]
Length = 348
Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats.
Identities = 143/355 (40%), Positives = 199/355 (56%), Gaps = 22/355 (6%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDFDLP IA P+ R ++RL++V I+D L L+ D +VF
Sbjct: 8 TLSDFDFDLPEELIAQFPLPERSASRLLLVD-----EKKIADSRFYHLIDHLSEGDLLVF 62
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNTKV+ A+ G + +I + + + R SK K G I+
Sbjct: 63 NNTKVLKARFFGSKAS-----GGKIEILIERILDNRNALAKIRASKSPKAGSIIRIDD-- 115
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
E V GE ++ S ++ + + G +PLPPYI +R D+ D YQ
Sbjct: 116 -----EIDVSVTGRDGEFFILQFPS--DIFKILEEHGHLPLPPYI--ERAADSFDEKRYQ 166
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A+ G+VAAPTAGLHF L+ +L GI ++TLHVGAGTF PV+ E+ +H MH
Sbjct: 167 TVFARELGAVAAPTAGLHFDDELMEKLRQKGISFAYLTLHVGAGTFQPVRSENLSEHQMH 226
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
+E I T +A+ + + ++V VGTTSLR LE+A ++ G + S T++FITPGY
Sbjct: 227 TEWYTIPEETVEAVKTAQQGKHKVVGVGTTSLRALESA-SQTGKLKAGSNETSLFITPGY 285
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+F+ VD L++NFHLPKSTLLMLVSAF G KK Y HAI+ YRF+SYGD LL
Sbjct: 286 QFQTVDHLITNFHLPKSTLLMLVSAFAGYNLIKKAYAHAIAEKYRFFSYGDAMLL 340
>gi|325206771|gb|ADZ02224.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis M04-240196]
Length = 346
Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats.
Identities = 151/360 (41%), Positives = 207/360 (57%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P+ + + D + DL ++ D +V
Sbjct: 1 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPD----MPLQDRVFGDLSDYVGEGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 109 --EGGIRAVMVGR--EGELFCLRFEGGQTVYELLEQNGHLPLPPYI--ERAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+VE ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVEKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + TA A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 223 HSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRF D L++NFHLPKSTLLMLVSAF G+ + Y++A+ YRF+SYGD +L +
Sbjct: 283 YRFNVADRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGDAMILGRNE 342
>gi|218262342|ref|ZP_03476847.1| hypothetical protein PRABACTJOHN_02521 [Parabacteroides johnsonii
DSM 18315]
gi|218223437|gb|EEC96087.1| hypothetical protein PRABACTJOHN_02521 [Parabacteroides johnsonii
DSM 18315]
Length = 349
Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats.
Identities = 124/361 (34%), Positives = 186/361 (51%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP IAL P RD +RLMVV+ I + DL ++ D +
Sbjct: 1 MKLSKFKFNLPQELIALHPAKNRDESRLMVVNRKTG---EIEHKVFKDLLSYFGEKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
FNNTKV A+L G + + I L ++ + W V P++ I+ G+ L+F
Sbjct: 58 FNNTKVFPARLYGNK----EKTGARIEVFLLRELNEDLRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D + A VID + L F G E ++ + +G PLP YI RP++ D
Sbjct: 114 EDD---SMVAEVIDNTTSRGRTLRFLYDGNHDEFKKALYALGETPLPKYI--DRPVEPDD 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQ +A +G+V AP AGLHF+ L+ RL + ++TLH G G F + VED
Sbjct: 169 EDRYQNIFATEEGAVVAPAAGLHFSRELMKRLEIKDCQFAYLTLHSGLGNFREIDVEDLT 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE ++ +N+ K G +I +VGT+ +R +ETA + DG + + G+TN F
Sbjct: 229 KHKMDSEQMVVNGDVVNIVNTAKDNGRQICAVGTSVMRAIETAVSTDGHLKEFEGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F +++NFH+P STLLM+ ++F G + Y+ A+ Y F +YGD L+
Sbjct: 289 IFPPYDFSVASSMITNFHMPLSTLLMMTASFGGYDLIMDAYEVALKEKYSFGAYGDAMLI 348
Query: 357 F 357
Sbjct: 349 L 349
>gi|229592462|ref|YP_002874581.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
fluorescens SBW25]
gi|259551475|sp|C3K1N5|QUEA_PSEFS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|229364328|emb|CAY52079.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
fluorescens SBW25]
Length = 349
Score = 433 bits (1113), Expect = e-119, Method: Composition-based stats.
Identities = 143/358 (39%), Positives = 205/358 (57%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R ++RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRASRLLTLDGVSGA---LAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRSSKSPKPGSSILI--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
EA ++ + + L + E+ + VG +PLPPYI RP + D Y
Sbjct: 110 --DGGGEAEMVARHDA---LFELKFA-EEVLPLLERVGHMPLPPYI--DRPDEDSDRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL + + G++ +VTLHVGAGTF PV+V++ +DH M
Sbjct: 162 QTVYSQRLGAVAAPTAGLHFDQPLLDAIAAKGVETAYVTLHVGAGTFQPVRVDNIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + K+RGGR+++VGTTS+R LE+A DG++ P+SG T+IFI PG
Sbjct: 222 HSEWLEVSQDVVDAVEACKARGGRVIAVGTTSVRSLESAAR-DGVLKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET YQ AI + YRF+SYGD + +
Sbjct: 281 RPFHVVDCLVTNFHLPESTLLMLVSAFAGYPETMAAYQAAIDNGYRFFSYGDAMFITR 338
>gi|261393199|emb|CAX50818.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queuosine
biosynthesis protein QueA) [Neisseria meningitidis 8013]
Length = 346
Score = 432 bits (1112), Expect = e-119, Method: Composition-based stats.
Identities = 151/360 (41%), Positives = 208/360 (57%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P+ + + D + DL ++ D +V
Sbjct: 1 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPD----MPLQDRVFGDLSDYVGEGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 109 --EGGIRAVMVGR--EGELFCLRFEGGQTVYELLEQNGHLPLPPYI--ERAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLHRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + TA A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 223 HSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRF VD L++NFHLPKSTLLMLVSAF G+ + Y++A+ YRF+SYGD +L +
Sbjct: 283 YRFNVVDRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGDAMVLGRNE 342
>gi|254369121|ref|ZP_04985133.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. holarctica FSC022]
gi|157122071|gb|EDO66211.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. holarctica FSC022]
Length = 340
Score = 432 bits (1112), Expect = e-119, Method: Composition-based stats.
Identities = 134/357 (37%), Positives = 208/357 (58%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LP IA P+ RD++RL+ ++ I+D+ +D F+N D +V
Sbjct: 3 MKTDDFDYKLPEELIASYPLENRDASRLLKLNKQTG---EIADYKFTDFIDFINPGDLLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV+ A+L G + ++ + +P + + + ++ G ++
Sbjct: 60 FNNSKVMLARLYGSKT-----TGAKLEYLIERIKNPKLFETHIKANRSPAIGSEIYVEDT 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
A V+DK G + L+ ++ + + G IPLPPY+ KR + D Y
Sbjct: 115 ------LAKVLDK--DGGMYLLEIQGDKDIYQLMEEFGHIPLPPYM--KRDDEEFDAERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GSVAA TAGLHF+ L+ ++ G+ + ++TLHVG+GTF PV+V+D + H M
Sbjct: 165 QTVYAQDLGSVAALTAGLHFSKELMQQIKDKGVDIAYITLHVGSGTFKPVQVDDIESHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E+ + Q + K GGR++++GTTS+R LETA ++G I P+ G T+IF+ PG
Sbjct: 225 HAEVISVPVEVCQKIRQTKENGGRVIAIGTTSVRSLETA-GQNGQIEPYQGETDIFLYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F VD +++NFHLPKSTL+MLVSAF E+ K Y+HAI+ YRF+SYGD +F
Sbjct: 284 KKFNVVDAMITNFHLPKSTLIMLVSAFADKEKIIKAYEHAIAERYRFFSYGDAMFIF 340
>gi|225873355|ref|YP_002754814.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acidobacterium capsulatum ATCC 51196]
gi|254764259|sp|C1F7K8|QUEA_ACIC5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|225793693|gb|ACO33783.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acidobacterium capsulatum ATCC 51196]
Length = 353
Score = 432 bits (1112), Expect = e-119, Method: Composition-based stats.
Identities = 147/362 (40%), Positives = 205/362 (56%), Gaps = 16/362 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V EFDF LP IA P+ R ++R++ + + D + +DLP FL D +V
Sbjct: 1 MLVSEFDFHLPEDLIAQEPLADRAASRMLALDRSTGAW---QDRMFADLPGFLRPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRRE----KEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
NNT+VI A+L G R + ++ L ++S W RP + + G+ +H
Sbjct: 58 LNNTRVIPARLFGRRAGLRTQPGHEATGQVEVMLTEQISEWEWRALVRPGRKVPVGESIH 117
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
F G L+A +I GE L F + + VG IPLPPYI R+ D
Sbjct: 118 F----GNEGLQAEIIAHGEFGERTLRF-TPIPDFFHVLERVGHIPLPPYIHRE--DRPED 170
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT Y + GSVAAPTAGLHFT +L++L +G++ ++TLHVG GTF PV+V+ +
Sbjct: 171 RERYQTVYNQQPGSVAAPTAGLHFTPQMLAKLQELGVQTAYITLHVGLGTFQPVRVDKVE 230
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-EDGI-INPWSGFTN 294
D +H E + TA A+N+ R+++VGTT++R LE T DG + P +G T
Sbjct: 231 DIRLHRERYTLSPETAAAVNAALHENRRVIAVGTTTVRTLEHCATVADGKPLVPHAGETE 290
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI+PGY+FR V L++NFHLP+STLLMLVSAF G E Y+HA+ YRF+SYGD
Sbjct: 291 IFISPGYKFRIVQGLLTNFHLPQSTLLMLVSAFAGREAVLAAYRHAVEQRYRFFSYGDCM 350
Query: 355 LL 356
L
Sbjct: 351 FL 352
>gi|62260381|gb|AAX77902.1| unknown protein [synthetic construct]
Length = 375
Score = 432 bits (1112), Expect = e-119, Method: Composition-based stats.
Identities = 135/357 (37%), Positives = 209/357 (58%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LP IA P+ RD++RL+ ++ I+D+ +D F+N D +V
Sbjct: 29 MKTDDFDYKLPEELIASYPLENRDASRLLKLNKQTG---EIADYKFTDFIDFINPGDLLV 85
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV+ A+L G + ++ + +P + + + ++ G ++
Sbjct: 86 FNNSKVMLARLYGSKT-----TGAKLEYLIERIKTPKLFETHIKANRSPAIGSEIYVEDT 140
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
A V+DK G + L+ ++ + + G IPLPPY+ KR + D Y
Sbjct: 141 ------LAKVLDK--DGGMYLLEIQGDKDIYQLMEEFGHIPLPPYM--KRDDEEFDAERY 190
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GSVAAPTAGLHF+ L+ ++ G+ + ++TLHVG+GTF PV+V+D + H M
Sbjct: 191 QTVYAQDLGSVAAPTAGLHFSKELMQQIKDKGVDIAYITLHVGSGTFKPVQVDDVESHKM 250
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E+ + Q + K GGR++++GTTS+R LETA ++G I P+ G T+IF+ PG
Sbjct: 251 HAEVISVPVEVCQKIRQTKENGGRVIAIGTTSVRSLETA-GQNGQIEPYQGETDIFLYPG 309
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F VD +++NFHLPKSTL+MLVSAF E+ K Y+HAI+ YRF+SYGD +F
Sbjct: 310 KKFNVVDAMITNFHLPKSTLIMLVSAFADKEKIIKAYEHAIAERYRFFSYGDAMFIF 366
>gi|325299411|ref|YP_004259328.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
salanitronis DSM 18170]
gi|324318964|gb|ADY36855.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
salanitronis DSM 18170]
Length = 351
Score = 432 bits (1112), Expect = e-119, Method: Composition-based stats.
Identities = 133/363 (36%), Positives = 194/363 (53%), Gaps = 16/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP RIAL PV RD +RLMVVH + I + D+ + + D +
Sbjct: 1 MKLSQFKFKLPEERIALHPVKYRDESRLMVVHKSTG---EIEHVIFKDILNYFDDQDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK----EKTGARIEVFLLRELNEELRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDARD 176
D + A VID + L F G E +R + +G PLPP+I +RP + D
Sbjct: 114 DDD---SMVAEVIDNTTSRGRTLRFLYDGPHDEFKRALYALGEPPLPPFI--RRPAEPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+QT +AK +G+V P AGLHF+ L+ R+ GI F+T+H G G F + VED
Sbjct: 169 TERFQTIFAKNEGAVTVPAAGLHFSRELMKRMEIKGINFAFITMHCGLGCFRDIDVEDLT 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE FI+A + +N+ K ++ +VGT+ +R +ETAT DG + + G+TN F
Sbjct: 229 KHKMDSEQMFINAEACKIVNTAKDNDHKVCAVGTSVMRAVETATGTDGHLKEYEGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F D +++NFH+P ST+LML ++ G E YQ A+ YRF +YGD L+
Sbjct: 289 IFPPYDFVLPDAMVTNFHMPLSTMLMLTCSYGGYELIMDAYQMALKEDYRFGTYGDAMLI 348
Query: 357 FQK 359
K
Sbjct: 349 LNK 351
>gi|116051849|ref|YP_789308.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
aeruginosa UCBPP-PA14]
gi|122260996|sp|Q02RX8|QUEA_PSEAB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|115587070|gb|ABJ13085.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
aeruginosa UCBPP-PA14]
Length = 347
Score = 432 bits (1112), Expect = e-119, Method: Composition-based stats.
Identities = 144/358 (40%), Positives = 204/358 (56%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP + IA P+ R ++RL+ + ++ +DL +L D +V
Sbjct: 1 MRVADFHFDLPEALIARHPLPERRASRLLALDGPTGT---LAHRQFADLLDYLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKES-----GGKLEVLVERVLDQHRVLAHIRASKAPKPGTRILV--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A ++ + + L + + L + VG +PLPPYI RP DA D Y
Sbjct: 110 --EGGGSAEMLQRHDA---LFELAFAEPVL-PLLERVGHMPLPPYI--DRPDDAADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL + + G+ FVTLHVGAGTF PV+VE +DH+M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDEALLEAIRAKGVDTAFVTLHVGAGTFQPVRVERIEDHVM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A+++ ++RGGR+V+VGTTS+R LE+A DG + P+SG T+IFI PG
Sbjct: 222 HREWLEVGQDVVDAVSACRARGGRVVAVGTTSVRSLESAAR-DGELKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y A++ YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAVAQGYRFFSYGDAMFITR 338
>gi|237654063|ref|YP_002890377.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Thauera sp.
MZ1T]
gi|237625310|gb|ACR02000.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Thauera sp.
MZ1T]
Length = 358
Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats.
Identities = 144/359 (40%), Positives = 207/359 (57%), Gaps = 15/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FD+ LPP IA P+ R ++RL+V+ P ++D + S L +N D +V
Sbjct: 3 LTLADFDYTLPPELIAQAPLAERSASRLLVLEPQEGAAPRLTDAVFSALAERVNPGDLLV 62
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L+GV+ ++ + V P+ R SK K G L
Sbjct: 63 FNDTRVIHARLHGVKDS-----GGQVEVLIERPVGPHEALAQVRASKSPKTGSRLRLADA 117
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
E V+ + GE + +L + G +PLPPYI +R D Y
Sbjct: 118 -----FEVEVLGRV--GEFFHLRFPPDEDLLALLERHGKLPLPPYI--QRAAGEADESRY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GSVAAPTAGLHF LL+R+ + G K ++TLHVGAGTF PV+V+D +H M
Sbjct: 169 QTVYARAPGSVAAPTAGLHFDDALLARIAARGAKCAWLTLHVGAGTFQPVRVDDLGEHRM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I T A+ + ++ GGR+++VGTTS+R LE A E G + SG T IFI PG
Sbjct: 229 HRERYVIPQETVDAIAATRAAGGRVIAVGTTSMRALEAAAQE-GALEAGSGETEIFILPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
+RF+ VD L++NFHLP+STL+MLVSAF G++ ++ Y HA+ YRF+SYGD + ++
Sbjct: 288 FRFQVVDALVTNFHLPRSTLMMLVSAFAGMDSIRRAYAHAVEQRYRFFSYGDAMFITRR 346
>gi|149277787|ref|ZP_01883927.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queuosine
biosynthesis protein) [Pedobacter sp. BAL39]
gi|149231475|gb|EDM36854.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queuosine
biosynthesis protein) [Pedobacter sp. BAL39]
Length = 349
Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats.
Identities = 135/361 (37%), Positives = 194/361 (53%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP S +A P RD ARLMV+H + I + D+ ++ + D ++
Sbjct: 1 MKLSQFKFNLPESLVANNPSEHRDEARLMVLHKDSGK---IEHKIFKDVLSYFDDQDVMI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 LNNTKVFPARLYGNK----EKTGATIEVFLLRELNKELRLWDVLVDPARKIRVGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D L A V+D + + F G E + I ++G PLP YI RK A+D
Sbjct: 114 DDD---LLVAEVVDNTTSRGRTIRFLFDGTDEEFRKNIEILGETPLPKYIKRK--ATAQD 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT +AK +G+VAAPTAGLHF+ L+ RL G+ VTLHVG GTF V+VED
Sbjct: 169 KERYQTIFAKHEGAVAAPTAGLHFSRELMKRLELKGVNFAEVTLHVGLGTFRSVEVEDLT 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I+ A +N +I +VGTTS+R +E+A + + + +T+ F
Sbjct: 229 KHKMDSEQFIIEQKDADIVNKAIEHKRKICAVGTTSMRAIESAVSSGRTLKAANDWTSKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH P+STLLM+VSAF G + + Y A+ YRFYSYGD L+
Sbjct: 289 IFPPYDFSIANSMITNFHTPESTLLMMVSAFGGYDYVRHAYDVALKEKYRFYSYGDAMLI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|257467859|ref|ZP_05631955.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium ulcerans ATCC 49185]
gi|317062148|ref|ZP_07926633.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium ulcerans ATCC 49185]
gi|313687824|gb|EFS24659.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium ulcerans ATCC 49185]
Length = 343
Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats.
Identities = 135/356 (37%), Positives = 194/356 (54%), Gaps = 16/356 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ ++D+ LP I +P PRD ARLM+V+ I D+ +LN D +V
Sbjct: 4 LLSDYDYHLPEKLIGQQPREPRDHARLMLVNRKNES---IEHKKFYDIIDYLNEGDILVR 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKVI A+L G + + L R+ ++W +P+K +K G L +
Sbjct: 61 NSTKVIPARLFGHKE-----TGGVLEILLIKRIDLDTWECLLKPAKKLKVGQKLFIGHGN 115
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
L +++ + G ++ F+ G E + +G +PLPPYI ++ YQ
Sbjct: 116 ---ELIGELLEIKDDGNRIIKFTYEG-AFEEVLDRLGKMPLPPYIVEA----LKEKDRYQ 167
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YA SVAAPTAGLHFT LL ++ GIK+ + L VG GTF PV+ E+ +H MH
Sbjct: 168 TVYAIKGESVAAPTAGLHFTKELLEKIEKKGIKIVDIFLEVGLGTFRPVQTENVLEHKMH 227
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E+ I A +N K G RI+SVGTTS R LE+A E+G++ G T IFI PG+
Sbjct: 228 EEVYEIPQEAADIINEGKKNGKRIISVGTTSTRALESAVDENGLVKALKGSTEIFIYPGF 287
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+ +D L++NFHLPKSTLLMLVSA E K+Y A+ Y F+S+GD ++
Sbjct: 288 EFKVIDALITNFHLPKSTLLMLVSALSSREFMLKVYDIAVKEEYHFFSFGDAMFIY 343
>gi|259418623|ref|ZP_05742540.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Silicibacter sp. TrichCH4B]
gi|259344845|gb|EEW56699.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Silicibacter sp. TrichCH4B]
Length = 369
Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats.
Identities = 165/360 (45%), Positives = 224/360 (62%), Gaps = 13/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RP PR SARL+V + I+D V+DL +LN+ D +V
Sbjct: 21 MKLSDFDFDLPEDLIATRPAVPRSSARLLVAEQDR-----ITDARVTDLLQWLNAGDRLV 75
Query: 61 FNNTKVITAQLNGVRFCHINRRE--KEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L+G R + I TL + WS +P K IK G+ + F
Sbjct: 76 LNDTRVIPARLSGQRHRTSAQGPVSARIEVTLLEPQADGCWSGLLKPLKKIKIGETVRFS 135
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
L A ++D G+ L F+++G + + ++ G +PLPPYIA KRP D +D
Sbjct: 136 DG-----LSAELVDVVE-GQGRLRFNLAGDDFDAALAEAGAMPLPPYIAAKRPADEQDKT 189
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LL+ L + G++ +VTLHVGAGTF+PVKVED H
Sbjct: 190 DYQTVWARSSGAVAAPTASLHFDEPLLAALAAKGVEFTYVTLHVGAGTFLPVKVEDVTSH 249
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A A + + K+ G R++ VGTT+LRL+E+A + G I PW G T+IFI
Sbjct: 250 KMHAEWGQVTAKAAAEIAATKAAGKRVIPVGTTALRLIESAARDSGAIAPWEGETDIFIY 309
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ FR D LM+NFHLPKSTL+MLVSA G E + +Y HA++ YRF+SYGD SLL
Sbjct: 310 PGFTFRVADALMTNFHLPKSTLMMLVSALMGQERMRSVYAHAVTERYRFFSYGDASLLIP 369
>gi|198274129|ref|ZP_03206661.1| hypothetical protein BACPLE_00266 [Bacteroides plebeius DSM 17135]
gi|198273207|gb|EDY97476.1| hypothetical protein BACPLE_00266 [Bacteroides plebeius DSM 17135]
Length = 351
Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats.
Identities = 131/363 (36%), Positives = 191/363 (52%), Gaps = 16/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P RD +RLMV+H + I D+ + + D +
Sbjct: 1 MKLSQFKFKLPEEKIALYPAKYRDESRLMVIHKSTG---EIEHVNFKDILNYFDDKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK----EKTGARIEVFLLRELNEELRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDARD 176
D + A VID + L F G E ++ + +G PLPP+I RP + D
Sbjct: 114 DDD---SMVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYALGEPPLPPFIH--RPAEPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+QT YAK +G+V P AGLHF+ L+ R+ GI F+T+H G G F + VED
Sbjct: 169 EERFQTIYAKNEGAVTVPAAGLHFSRELMKRMEIKGIDFSFITMHAGLGNFRDIDVEDLT 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE F++A + +N K RG ++ ++GTT +R +ETA DG + + G+TN F
Sbjct: 229 KHKMDSEQMFVNAEACRIVNEAKDRGNKVCAIGTTVMRAIETAVGTDGHLKEFEGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + ++SNFH+P ST+LMLV A+ G E Y A+ YRF +YGD L+
Sbjct: 289 IFPPYDFSVANAMVSNFHMPLSTMLMLVCAYGGYELIMDAYNIALKEDYRFGTYGDAMLI 348
Query: 357 FQK 359
K
Sbjct: 349 LDK 351
>gi|154494349|ref|ZP_02033669.1| hypothetical protein PARMER_03704 [Parabacteroides merdae ATCC
43184]
gi|154085793|gb|EDN84838.1| hypothetical protein PARMER_03704 [Parabacteroides merdae ATCC
43184]
Length = 349
Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats.
Identities = 124/361 (34%), Positives = 185/361 (51%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP IAL P RD +RLM+V+ I + DL ++ D +
Sbjct: 1 MKLSKFKFNLPQELIALHPAKNRDESRLMIVNRKTG---EIEHKVFKDLLSYFGEKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
FNNTKV A+L G + + I L ++ + W V P++ I+ G+ L+F
Sbjct: 58 FNNTKVFPARLYGNK----EKTGARIEVFLLRELNEDLRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D + A VID + L F G E ++ + +G PLP YI RP++ D
Sbjct: 114 EDD---SMVAEVIDNTTSRGRTLRFLYDGNHDEFKKALYALGETPLPKYI--DRPVEPDD 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQ +A +G+V AP AGLHF+ L+ RL + F+TLH G G F + VED
Sbjct: 169 EDRYQNIFATEEGAVVAPAAGLHFSRELMKRLEIKDCQFAFLTLHSGLGNFREIDVEDLT 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE ++ +N+ K G +I +VGT+ +R +ETA + DG + + G+TN F
Sbjct: 229 KHKMDSEQMVVNGDVVNIVNTAKDNGRQICAVGTSVMRAIETAVSTDGHLKEFEGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F +++NFH+P STLLM+ ++F G + Y A+ Y F +YGD L+
Sbjct: 289 IFPPYDFSVASSMITNFHMPLSTLLMMTASFGGYDLIMDAYDVALKEKYSFGAYGDAMLI 348
Query: 357 F 357
Sbjct: 349 L 349
>gi|269468922|gb|EEZ80506.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase [uncultured
SUP05 cluster bacterium]
Length = 340
Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats.
Identities = 146/356 (41%), Positives = 200/356 (56%), Gaps = 22/356 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M++ +FDF+LP IA P R + L+V I D + F++ D +V
Sbjct: 1 MLLSDFDFNLPNELIAQHPPKKRTDSNLLV------AQSTIIDTKFHKIEDFISPGDLLV 54
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G + ++ + ++ + + S+ K + +
Sbjct: 55 MNNTRVIPARLFGHKES-----GGKVEIMIERLLNDHQVLAMMKASRAPKIDSFITIENG 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ +A VI K N L + S L + VG IPLPPYI +R + D Y
Sbjct: 110 E-----KAQVISKKNGFYTLNFITNS---LLDLLDNVGHIPLPPYI--ERGDEQADLERY 159
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +AK +G+VAAPTAGLHF LL L + G+ FVTLHVGAGTF PVK + DH M
Sbjct: 160 QTVFAKHEGAVAAPTAGLHFDDELLLSLKTKGVDHCFVTLHVGAGTFQPVKADKITDHKM 219
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ID T +N KS GGRI++VGTT++R +E+A + G + G T+IFI PG
Sbjct: 220 HSEYFEIDQITVDKINQTKSNGGRIIAVGTTAVRSVESAA-KSGTLKAIKGETDIFIYPG 278
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+ VD L++NFHLPKS+LLMLVSAF G ++ ++YQHAI YRF+SYGD LL
Sbjct: 279 YEFKIVDKLITNFHLPKSSLLMLVSAFIGRDKMMEIYQHAIDKKYRFFSYGDAMLL 334
>gi|86138785|ref|ZP_01057357.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseobacter
sp. MED193]
gi|85824432|gb|EAQ44635.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseobacter
sp. MED193]
Length = 356
Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats.
Identities = 163/362 (45%), Positives = 227/362 (62%), Gaps = 14/362 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP + IA RP PR SARL+V + P ++D + DL L D +V
Sbjct: 1 MKLSDFDFDLPDALIATRPATPRSSARLLV-----ATPDQMTDGHIGDLVDLLQPGDRLV 55
Query: 61 FNNTKVITAQLNGVRF--CHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+L+G+R R +I TL + SWS +P K +K G+ + F
Sbjct: 56 LNDTKVIPARLSGLRHRDTAQGRMAAKIEVTLLDPKADGSWSALLKPLKKVKIGETVAFS 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
L A ++ G+ LL F++ G + + ++ G +PLPPYIA KR D +D
Sbjct: 116 DA-----LTAELVGVTE-GQGLLRFNLVGDDFDAALNAAGAMPLPPYIAAKRAADDQDKE 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF +LL+ L + G++ +VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVWARHSGAVAAPTASLHFDQDLLAVLKAKGVQFTYVTLHVGAGTFLPVKVEDVTSH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A A + + K+ GGR++ VGTT+LRL+E+A G + PW G T+IFI
Sbjct: 230 KMHAEWGRVSAEAAAEIAATKAAGGRVIPVGTTALRLIESAAR-GGTVQPWEGETDIFIY 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ F A D LM+NFHLPKSTLLML+SA G + +++Y+HA++ YRF+SYGD SLL
Sbjct: 289 PGFVFHAADALMTNFHLPKSTLLMLISALMGQDRVREIYEHAVNSRYRFFSYGDGSLLLP 348
Query: 359 KR 360
+
Sbjct: 349 QE 350
>gi|320161390|ref|YP_004174614.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Anaerolinea
thermophila UNI-1]
gi|319995243|dbj|BAJ64014.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Anaerolinea
thermophila UNI-1]
Length = 339
Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats.
Identities = 142/360 (39%), Positives = 200/360 (55%), Gaps = 24/360 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LPP IA PV PR ++RLMV++ I + ++ +L+ D +V
Sbjct: 1 MKTSDFDYFLPPECIAQHPVEPRHNSRLMVLNR---ANDSIQHTIFWNITEYLHPGDILV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N T+VI A++ + ++ L RV ++W K +KG
Sbjct: 58 VNQTRVIPARIYAHKE-----TGGKLEILLLRRVDDHTWEALIG-GKRPRKGKSFMI--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L T+I++ L+ F+ +E + +G +PLPPYI RD Y
Sbjct: 109 --NEHLHGTIIEELEESRRLVRFNQP---VEPYLERIGQMPLPPYIHEP----LRDPERY 159
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ GS AAPTAGLHFTS L+ R+ +GI+ VTLHVG TFMPV E+ +H +
Sbjct: 160 QTIFARQPGSAAAPTAGLHFTSELIERIAQMGIQFAEVTLHVGLDTFMPVHEENPLEHKI 219
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA---TTEDGIINPWSGFTNIFI 297
H+E + TAQ +N+ K GGRI++VGTTS+R LETA E + SG T+++I
Sbjct: 220 HTEWCELTEETAQKINAAKKEGGRIIAVGTTSVRTLETAAQYAREGEWVGAVSGATSLYI 279
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY FRAVD +++NFHLP+STL+MLVSAF G E Y+ AI YRFYS+GD L+
Sbjct: 280 LPGYTFRAVDAMITNFHLPRSTLIMLVSAFAGRERILNAYKVAIEQGYRFYSFGDAMLIL 339
>gi|322514365|ref|ZP_08067414.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus ureae ATCC 25976]
gi|322119735|gb|EFX91777.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Actinobacillus ureae ATCC 25976]
Length = 361
Score = 431 bits (1110), Expect = e-119, Method: Composition-based stats.
Identities = 132/360 (36%), Positives = 191/360 (53%), Gaps = 14/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +F F+LP A P R ++RL+ ++ +D SDL + D ++
Sbjct: 1 MLVSDFHFNLPDELTARYPTSERTASRLLHLNGETG---EFADKQFSDLLTHIEEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK K+G L
Sbjct: 58 FNNTRVIPARLYGRKAS-----GGKLEVLVERVLDEQRCLAHVRASKAPKEGAELVLGED 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
I + + L + G IPLPPYI RP + D Y
Sbjct: 113 KLGEGNGFKAIMATRHEALFELHFNEEQPLFDLLQQAGHIPLPPYI--DRPDEDADQERY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K+ G+VAAPTAGLHF + L +L + G+ + FVTLHVGAGTF PV+V++ DH M
Sbjct: 171 QTVYSKVLGAVAAPTAGLHFDTPTLEKLKAKGVNIAFVTLHVGAGTFQPVRVDNILDHKM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT----TEDGIINPWSGFTNIF 296
H+E + + + K+ G R+++VGTTS+R +E+A E +I P+ T+IF
Sbjct: 231 HAEYAEVSQDVVDQILATKAAGKRVIAVGTTSVRSIESAAQAAEQEGKLIAPFFSDTSIF 290
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ PG FR VD L++NFHLP+STL+MLVSAF G T Y+HA+ YRF+SYGD +
Sbjct: 291 LYPGKTFRIVDALVTNFHLPESTLIMLVSAFAGYRNTMNAYKHAVEAKYRFFSYGDAMFI 350
>gi|325201501|gb|ADY96955.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis M01-240149]
Length = 346
Score = 431 bits (1110), Expect = e-119, Method: Composition-based stats.
Identities = 153/360 (42%), Positives = 210/360 (58%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P+ + + D + DLP ++ + D +V
Sbjct: 1 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPD----MPMQDRVFGDLPDYVEAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDSHTALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 109 --EGGIRAVMVGR--EGELFCLRFEGGQTVYELLEQNGHLPLPPYI--ERAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+VE ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVEKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + TA A+ + K+RG ++ +VGTTS+R LE+A E G + G T+IFITPG
Sbjct: 223 HSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAAHETGHLKDGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRF D L++NFHLPKSTLLMLVSAF G+ + Y++A+ YRF+SYGD +L +
Sbjct: 283 YRFNVADRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGDAMVLGRNE 342
>gi|49087346|gb|AAT51447.1| PA3824 [synthetic construct]
Length = 348
Score = 431 bits (1110), Expect = e-119, Method: Composition-based stats.
Identities = 144/358 (40%), Positives = 203/358 (56%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP + IA P+ R ++RL+ + ++ +DL +L D +V
Sbjct: 1 MRVADFHFDLPEALIARHPLPERRASRLLALDGPTGT---LAHRQFADLLDYLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKES-----GGKLEVLVERVLDQHRVLAHIRASKAPKPGTRILV--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A ++ + + L + + L + VG +PLPPYI RP DA D Y
Sbjct: 110 --EGGGSAEMLQRHDA---LFELAFAEPVL-PLLERVGHMPLPPYI--DRPDDAADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL + + G+ FVTLHVGAGTF PV+VE +DH+M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDEALLEAIRAKGVDTAFVTLHVGAGTFQPVRVERIEDHVM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A++ ++RGGR+V+VGTTS+R LE+A DG + P+SG T+IFI PG
Sbjct: 222 HREWLEVGQDVVDAVSVCRARGGRVVAVGTTSVRSLESAAR-DGELKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y A++ YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAVAQGYRFFSYGDAMFITR 338
>gi|307293389|ref|ZP_07573235.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Sphingobium
chlorophenolicum L-1]
gi|306881455|gb|EFN12671.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Sphingobium
chlorophenolicum L-1]
Length = 342
Score = 431 bits (1110), Expect = e-119, Method: Composition-based stats.
Identities = 186/358 (51%), Positives = 230/358 (64%), Gaps = 16/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLPP IALRP PRDSARL++V + + D +V DLP L D +V
Sbjct: 1 MRVDLFDFDLPPESIALRPASPRDSARLLLVSGD----ALFEDRIVRDLPGLLRPGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R E I TLH R+S W + R +K ++ GD + F +
Sbjct: 57 FNDTKVIPAQLEGMR------GEARIGATLHKRLSLRQWQAFLRNAKRVRDGDRIDFGAG 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A + G + L F +E + G +PLPPYIA KRP D RD DY
Sbjct: 111 -----VTAIAGPRDEDGGVTLSFEGE-EPVEVLLERAGRMPLPPYIASKRPTDERDRSDY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTA LHFT +L + L G+ +TLHVGAGTF+PVK EDTDDH M
Sbjct: 165 QTMFAREDGAVAAPTAALHFTPDLTAALAKAGVGTETLTLHVGAGTFLPVKAEDTDDHRM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G ID TA LN+ + GGR+++VGTTSLRLLE+AT E G+I+P++ T IFITPG
Sbjct: 225 HAEWGRIDQATADRLNAARQAGGRLIAVGTTSLRLLESATDEHGVIHPFADETRIFITPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRFRAVD LM+NFHLPKSTL MLVSA G E + Y HAI+ YRFYSYGD+SLL
Sbjct: 285 YRFRAVDGLMTNFHLPKSTLFMLVSALMGRERMQAAYAHAIAQGYRFYSYGDSSLLLP 342
>gi|317121691|ref|YP_004101694.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Thermaerobacter marianensis DSM 12885]
gi|315591671|gb|ADU50967.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Thermaerobacter marianensis DSM 12885]
Length = 353
Score = 431 bits (1110), Expect = e-119, Method: Composition-based stats.
Identities = 142/359 (39%), Positives = 210/359 (58%), Gaps = 16/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V EFD++LPP IA P+ RD++RLMVV + + DLP FL + D +V
Sbjct: 1 MRVDEFDYELPPELIAQEPLPRRDASRLMVVDRDSGRWI---HAHFRDLPRFLRAGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V A+L G R + L + W ARP + ++ G + +
Sbjct: 58 LNDTRVRPARLYGRRT-----TGGHVEFLLLQPLDDGRWLALARPGRRLRPGTEVVCGEE 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSIS-GIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
L V + ++GE ++ G ++ + +G +PLPPYI + +D
Sbjct: 113 R---PLRVRVEEVRDSGERVIRLEPPQGETVDETLHRLGRVPLPPYIR----TELKDPER 165
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ +GSVAAPTAGLHFT LL L G+++ ++TLHVG GTF PV + ++H
Sbjct: 166 YQTVYAREEGSVAAPTAGLHFTPELLEELQDQGVRIAYLTLHVGVGTFRPVTAQRVEEHR 225
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH+E ++ A A+N+ +S GGR+++VGTT R LET +DG + P SG+T++FI P
Sbjct: 226 MHAEFFRVEPEAAAAINAARSAGGRVIAVGTTVTRTLETVAADDGTVRPGSGWTDLFIYP 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
GYRF+A+D L++NFHLP+STL+MLV+A G E T Y+ A++ YRF+S+GD L+
Sbjct: 286 GYRFKAIDGLITNFHLPRSTLIMLVAALLGKERTLAAYREAVARRYRFFSFGDAMLILP 344
>gi|313901951|ref|ZP_07835368.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Thermaerobacter subterraneus DSM 13965]
gi|313467797|gb|EFR63294.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Thermaerobacter subterraneus DSM 13965]
Length = 358
Score = 431 bits (1110), Expect = e-119, Method: Composition-based stats.
Identities = 144/359 (40%), Positives = 212/359 (59%), Gaps = 16/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V EFD+DLPP IA +P+ RD++RLMVV + L DLP FL + D +V
Sbjct: 1 MRVDEFDYDLPPELIAQQPLARRDASRLMVVDRDTGRWL---HARFRDLPRFLRAGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V A+L G R ++ L + W ARP + ++ G + +
Sbjct: 58 LNDTRVRPARLYGRRP-----TGGQVEFLLLQPLDGGRWLALARPGRRVRPGTEVVCGEE 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSIS-GIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
L V + ++GE ++ G ++ + +G +PLPPYI + D
Sbjct: 113 R---PLRVYVEEARDSGERVIRLEPPPGETVDETLHRLGRVPLPPYIR----AELEDPER 165
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ +GSVAAPTAGLHFT LL RL G+++ ++TLHVG GTF PV E ++H
Sbjct: 166 YQTVYAREEGSVAAPTAGLHFTPELLKRLQDQGVRIAYLTLHVGVGTFRPVTAERVEEHQ 225
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH+E ++ A+A+N+ ++ GGR+++VGTT R LET G + P SG+T++FI P
Sbjct: 226 MHAEFYRVEPAAAEAINAARAAGGRVIAVGTTVTRTLETVAAAGGTVRPGSGWTDLFIYP 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
GYRF+A+D L++NFHLP+STL+MLV+A G E+T Y+ A++ YRF+S+GD L+
Sbjct: 286 GYRFKAIDGLITNFHLPRSTLIMLVAALLGKEQTLAAYREAVARRYRFFSFGDAMLILP 344
>gi|316985467|gb|EFV64414.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis H44/76]
gi|325133504|gb|EGC56167.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis M13399]
gi|325200917|gb|ADY96372.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis H44/76]
Length = 346
Score = 431 bits (1110), Expect = e-119, Method: Composition-based stats.
Identities = 152/360 (42%), Positives = 208/360 (57%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P+ + + D + DLP ++ + D +V
Sbjct: 1 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPD----MPLQDRVFGDLPDYVEAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A + + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 109 --EGGIRAVTVGR--EGELFCLRFEGGETVYELLEQNGHLPLPPYI--ERAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLHRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + TA A+ + K+RG ++ +VGTTS+R LE+A + G T+IFITPG
Sbjct: 223 HSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATARLKAGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRF VD L++NFHLPKSTLLMLVSAF G+ + Y+HA+ YRF+SYGD +L +
Sbjct: 283 YRFNVVDRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRHAVEREYRFFSYGDAMVLGRNE 342
>gi|332187845|ref|ZP_08389579.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sphingomonas sp. S17]
gi|332012195|gb|EGI54266.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sphingomonas sp. S17]
Length = 345
Score = 431 bits (1110), Expect = e-119, Method: Composition-based stats.
Identities = 182/358 (50%), Positives = 235/358 (65%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF LPP RIAL P PRDSAR++V+ + + D VSDLP L + D +V
Sbjct: 1 MNVDLFDFALPPERIALYPASPRDSARMLVLDGDAT-----RDERVSDLPQALRAGDLLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI AQL G R + +I TLH R W + R +K +++GD++ F +
Sbjct: 56 FNDTRVIPAQLQGTR------GDAKIGATLHKREGVRRWRAFIRNAKRLREGDVIDFGAG 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ AT D+ G L F+ +E + GT+PLPPYIA+KR + +D DY
Sbjct: 110 -----VSATANDRAEDGSFALDFAGD-EPVELLLERAGTMPLPPYIAQKRGVTEKDAEDY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTA LHFT LL L + GI+ +TLHVGAGTF+PVK +DT DH M
Sbjct: 164 QTMFAQEPGAVAAPTAALHFTPGLLESLAAAGIEHATLTLHVGAGTFLPVKADDTVDHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G IDA TA LN+VK+RGGR+++VGTTSLRL+E+A EDG+I P+ G T IFITPG
Sbjct: 224 HAEWGRIDAATAHRLNAVKARGGRVIAVGTTSLRLIESAAGEDGVIRPFEGDTAIFITPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRFR +D LM+NFHLP+STL MLVSA G++ + Y HAI+ YRFYSYGD SLL
Sbjct: 284 YRFRGIDGLMTNFHLPRSTLFMLVSALMGLDRMQAAYAHAIAQGYRFYSYGDASLLLP 341
>gi|218889892|ref|YP_002438756.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
aeruginosa LESB58]
gi|226736742|sp|B7UVU3|QUEA_PSEA8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|218770115|emb|CAW25877.1| S-adenosylmethionine:trna ribosyltransferase-isomerase [Pseudomonas
aeruginosa LESB58]
Length = 347
Score = 431 bits (1110), Expect = e-119, Method: Composition-based stats.
Identities = 144/358 (40%), Positives = 203/358 (56%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP + IA P+ R ++RL+ + ++ +DL +L D +V
Sbjct: 1 MRVADFHFDLPEALIARHPLPERRASRLLALDGPTGT---LAHRQFADLLDYLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKES-----GGKLEVLVERVLDQDRVLAHIRASKAPKPGTRILV--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A ++ + + L + + L + VG +PLPPYI RP DA D Y
Sbjct: 110 --EGGGSAEMLQRHDA---LFELAFAEPVL-PLLERVGHMPLPPYI--DRPDDAADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL + + G+ FVTLHVGAGTF PV+VE +DH+M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDEALLEAIRAKGVDTAFVTLHVGAGTFQPVRVERIEDHVM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A++ ++RGGR+V+VGTTS+R LE+A DG + P+SG T+IFI PG
Sbjct: 222 HREWLEVGQDVVDAVSVCRARGGRVVAVGTTSVRSLESAAR-DGELKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y A++ YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAVAQGYRFFSYGDAMFITR 338
>gi|86606142|ref|YP_474905.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus sp. JA-3-3Ab]
gi|86554684|gb|ABC99642.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus sp. JA-3-3Ab]
Length = 396
Score = 431 bits (1110), Expect = e-119, Method: Composition-based stats.
Identities = 147/372 (39%), Positives = 211/372 (56%), Gaps = 20/372 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
++ +D+ LPP RIA PV PRD AR++VV+P+ DLP +L + D +V
Sbjct: 31 LLTASYDYSLPPERIAQAPVEPRDQARMLVVYPDR-----HEHRRFCDLPDYLQAGDLLV 85
Query: 61 FNNTKVITAQLNGVRFC-HINRREKEISCTLHMRVSPNS------WSVYARPSKVIKKGD 113
N+TKVI A+L G + + + L + N+ W V RP K +K GD
Sbjct: 86 LNDTKVIPARLWGAKVLPGKDASGARVEVLLLEPIPANTSKQEQIWRVLVRPGKRVKVGD 145
Query: 114 ILHFFSQDGQ-SRLEATVID-KWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKR 170
+ F+ + G + L ATV+ TG ++ + G + E+ + VG IPLPPY+
Sbjct: 146 QIRFWDRQGSPAELGATVLAVDAETGGRVVQLTWEGADTFEQILGRVGRIPLPPYLKAAH 205
Query: 171 PIDAR----DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGT 226
+D DYQT +A+ GSVAA TAGLHFT LL RL GI+ ++TL++G GT
Sbjct: 206 ALDPTSAGVRPEDYQTVWARHPGSVAASTAGLHFTPQLLERLAQKGIQTAYITLNIGLGT 265
Query: 227 FMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII 286
F PV+ E DH +HSE + A T + +++G R+++VGTT +R LETA G +
Sbjct: 266 FRPVEAERVTDHRLHSEWLKVPAETVATIRETQAQGRRVIAVGTTVVRALETAAL-CGTL 324
Query: 287 NPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYR 346
PW G +++FI PGY +R V L++NFHLP+S+L+MLV+A G E +YQ AI YR
Sbjct: 325 QPWQGKSDLFIYPGYSWRVVQGLITNFHLPRSSLMMLVAALIGRERLLDLYQEAIREGYR 384
Query: 347 FYSYGDTSLLFQ 358
FYS+GD L+
Sbjct: 385 FYSFGDGMLILP 396
>gi|119505230|ref|ZP_01627305.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [marine
gamma proteobacterium HTCC2080]
gi|119458921|gb|EAW40021.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [marine
gamma proteobacterium HTCC2080]
Length = 358
Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats.
Identities = 138/360 (38%), Positives = 200/360 (55%), Gaps = 12/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F +DLP IA P+ R +RL+V+ + + S L L ND +V
Sbjct: 1 MRRQDFYYDLPEELIAQEPLAQRTGSRLLVLDGDTGG---VRHSQFSRLIDLLEPNDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L GV+ + + + + S + R SK K G +
Sbjct: 58 FNNTRVIPARLFGVK-----QTGGRVEILIERLLEGGSALAHVRASKSPKPGAAILITPD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D E +V + G L + + + +G +PLPPYI R DA+D Y
Sbjct: 113 DQSDATEFSVRVEGRRG-ALFELVVDSGSWPQILKTLGHMPLPPYIERS--DDAQDRQRY 169
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF +++++ + S GIK VTLHVGAGTF PV+ E+ DH M
Sbjct: 170 QTVFARRDGAVAAPTAGLHFDAHMIADIESRGIKTTEVTLHVGAGTFQPVRAENIADHHM 229
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+ + GR+V+VGTT++R LETA + G + +SG +NIF+ PG
Sbjct: 230 HSEWLEVNDEVVAAVQRCREAKGRVVAVGTTAVRSLETAA-QGGALRRFSGDSNIFLYPG 288
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
F VD +++NFHLP+STL+MLV+AF G ET YQ A+ YRF+SYGD + ++
Sbjct: 289 QPFNVVDAMVTNFHLPESTLIMLVAAFAGHRETMSAYQEAVDQRYRFFSYGDAMFVTARQ 348
>gi|332184351|gb|AEE26605.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
cf. novicida 3523]
Length = 338
Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats.
Identities = 133/357 (37%), Positives = 208/357 (58%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LP IA P+ RD+++L+ ++ I+DH +DL F+ D +V
Sbjct: 1 MKTDDFDYKLPEELIASYPLENRDASKLLKLNRQTG---EIADHKFTDLIDFITPKDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV+ A+L G + ++ + +P + + + ++ G ++
Sbjct: 58 FNNSKVMLARLYGSKT-----TGAKLEYLIERIKTPKLFETHIKANRSPAIGSEIYVEDT 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
A V+DK G + L+ ++ + G IPLPPY+ KR + D Y
Sbjct: 113 ------LAKVLDK--DGGMYLLEIQGDKDIYHLMEEFGHIPLPPYM--KREDEEFDAERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GSVAAPTAGLHF+ L+ ++ GI + ++TLHVG+GTF PV+V++ + H M
Sbjct: 163 QTVYAKDLGSVAAPTAGLHFSQQLMQQIKDKGIDIAYITLHVGSGTFKPVQVDNVESHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E+ + A + + K+ GGR++++GTTS+R LETA ++G I P+ G T+IF+ PG
Sbjct: 223 HAEVISVPADVCEKIRQTKANGGRVIAIGTTSVRSLETA-GQNGQIEPYQGETDIFLYPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F VD +++NFHLPKSTL+MLVSAF + + Y HAI+ YRF+SYGD ++
Sbjct: 282 KKFNVVDAMITNFHLPKSTLIMLVSAFADKHKIMQAYHHAIAQKYRFFSYGDAMFIY 338
>gi|304311792|ref|YP_003811390.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [gamma
proteobacterium HdN1]
gi|301797525|emb|CBL45745.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [gamma
proteobacterium HdN1]
Length = 346
Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats.
Identities = 140/356 (39%), Positives = 190/356 (53%), Gaps = 11/356 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F F+LP IA P R +RL+VV + D DL +L D +V
Sbjct: 1 MQRSDFHFELPAELIASHPAQERTGSRLLVVDRK---QHALHDRQFPDLLDWLEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + +S + R SK K G + +
Sbjct: 58 FNNTRVIPARLFGQKE-----TGGQVEILVERLLSARKCLAHVRASKSPKPGSAIQVGAY 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + + EL + G IPLPPYI R + RD Y
Sbjct: 113 QLRVIARHDALFELALETATNAPDKRPAELTDLLEQEGHIPLPPYI--DRADEPRDRERY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K+ G+VAAPTAGLHF L RL G+++ VTLHVGAGTF PV+ E+ +H M
Sbjct: 171 QTVYSKVPGAVAAPTAGLHFDQAFLERLRERGVRMAHVTLHVGAGTFQPVRAENILEHHM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + + K+ G R+++VGTTS+R LETA +G I P+ G T+IFI PG
Sbjct: 231 HSEWLQVSPEAVDLVRATKAAGKRVIAVGTTSVRSLETAAR-NGEIAPYEGDTDIFIYPG 289
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y FR VD L++NFHLP+STL+MLVSA G E + Y HAI+ Y F+SYGD L+
Sbjct: 290 YSFRVVDALITNFHLPESTLIMLVSALAGREFVLQAYAHAIAQRYHFFSYGDAMLI 345
>gi|15599019|ref|NP_252513.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
aeruginosa PAO1]
gi|107103344|ref|ZP_01367262.1| hypothetical protein PaerPA_01004413 [Pseudomonas aeruginosa PACS2]
gi|254236728|ref|ZP_04930051.1| S-adenosylmethionine:trna ribosyltransferase-isomerase [Pseudomonas
aeruginosa C3719]
gi|254242515|ref|ZP_04935837.1| S-adenosylmethionine:trna ribosyltransferase-isomerase [Pseudomonas
aeruginosa 2192]
gi|21263918|sp|Q9HXH8|QUEA_PSEAE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|9949998|gb|AAG07211.1|AE004799_17 S-adenosylmethionine:trna ribosyltransferase-isomerase [Pseudomonas
aeruginosa PAO1]
gi|126168659|gb|EAZ54170.1| S-adenosylmethionine:trna ribosyltransferase-isomerase [Pseudomonas
aeruginosa C3719]
gi|126195893|gb|EAZ59956.1| S-adenosylmethionine:trna ribosyltransferase-isomerase [Pseudomonas
aeruginosa 2192]
Length = 347
Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats.
Identities = 144/358 (40%), Positives = 203/358 (56%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP + IA P+ R ++RL+ + ++ +DL +L D +V
Sbjct: 1 MRVADFHFDLPEALIARHPLPERRASRLLALDGPTGT---LAHRQFADLLDYLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKES-----GGKLEVLVERVLDQHRVLAHIRASKAPKPGTRILV--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A ++ + + L + + L + VG +PLPPYI RP DA D Y
Sbjct: 110 --EGGGSAEMLQRHDA---LFELAFAEPVL-PLLERVGHMPLPPYI--DRPDDAADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL + + G+ FVTLHVGAGTF PV+VE +DH+M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDEALLEAIRAKGVDTAFVTLHVGAGTFQPVRVERIEDHVM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A++ ++RGGR+V+VGTTS+R LE+A DG + P+SG T+IFI PG
Sbjct: 222 HREWLEVGQDVVDAVSVCRARGGRVVAVGTTSVRSLESAAR-DGELKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y A++ YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAVAQGYRFFSYGDAMFITR 338
>gi|118580221|ref|YP_901471.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Pelobacter
propionicus DSM 2379]
gi|166216735|sp|A1APZ3|QUEA_PELPD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|118502931|gb|ABK99413.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Pelobacter
propionicus DSM 2379]
Length = 343
Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats.
Identities = 150/358 (41%), Positives = 197/358 (55%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+VKEFD+ LP IA P RD +RLM+++ I L D+ L D +V
Sbjct: 1 MLVKEFDYHLPEELIARYPAPERDGSRLMLLNRESGT---IGHGLFRDIADHLRPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVS--PNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L G + + L R WS R SK ++ G ++
Sbjct: 58 LNDTRVIPARLFGRKA-----TGGRVEIFLVRRQETQAERWSCLMRSSKGMRPGQLITL- 111
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ A V+++ LL F + + G +PLPPY+ +RP ++ D +
Sbjct: 112 ----AGAMTALVVERLEPEGWLLEFQGA-EPFSVWLEREGEMPLPPYL--QRPAESGDQL 164
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT +A+ G+VAAPTAGLHFT LL RL G+ +TLH G GTF P++VE DH
Sbjct: 165 RYQTVFARSAGAVAAPTAGLHFTPELLERLAERGVATACLTLHTGPGTFQPLRVERVQDH 224
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
+HSE I A T QA+ K RGGR+V+VGTTS R LE A E G + P SG +IFI
Sbjct: 225 RIHSERYHISAETCQAIAETKQRGGRVVAVGTTSARTLEYAADEKGGLCPGSGDADIFIY 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGYRFR VD L++NFHLP+STL+MLVSAF G E Y A YRFYSYGD +
Sbjct: 285 PGYRFRVVDALVTNFHLPESTLIMLVSAFAGKEYVFHAYHEAARLGYRFYSYGDAMFI 342
>gi|300703083|ref|YP_003744685.1| s-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ralstonia
solanacearum CFBP2957]
gi|299070746|emb|CBJ42041.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ralstonia
solanacearum CFBP2957]
Length = 356
Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats.
Identities = 147/360 (40%), Positives = 202/360 (56%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FDFDLPP IA + R ++RL+ V D +DL +L D +V
Sbjct: 2 LTLSDFDFDLPPELIAQTALPDRTASRLLAVRRETQG-THFDDRRFADLIDYLRPGDLLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+ G + I + + ++ R SK G L +
Sbjct: 61 FNDTRVIKARFFGHKAS-----GGRIEVLVERLLDEHTVLAQIRSSKSPVAGSRLRLANA 115
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ TV + L + I G +PLPPYI D+ D Y
Sbjct: 116 -----FDVTVGPRQEPFFTLRFPQPA----LELIEQYGRLPLPPYIEH--TPDSFDETRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF L +RL ++G++ F+TLHVGAGTF PV+VE+ +H M
Sbjct: 165 QTVYARTPGAVAAPTAGLHFDDALFARLDAMGVRRGFLTLHVGAGTFSPVRVENIAEHRM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I A+A+ + ++ GGR+++VGTTS+R LE+A DG + SG T+IFITPG
Sbjct: 225 HSEWYAISPELAEAIRATRAAGGRVIAVGTTSMRALESAAQPDGTLAAGSGETDIFITPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI+ YRF+SYGD L +
Sbjct: 285 YRFRLVDALVTNFHLPKSTLLMLVSAFAGLETIRAAYRHAIAQRYRFFSYGDAMFLTRAE 344
>gi|325204815|gb|ADZ00269.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis M01-240355]
Length = 346
Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats.
Identities = 151/360 (41%), Positives = 208/360 (57%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P+ + + D + DL ++ + D +V
Sbjct: 1 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPD----MPLQDRVFGDLQDYVEAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A + + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 109 --EGGIRAVTVGR--EGELFCLRFEGGQTVYELLEQNGHLPLPPYI--ERAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + TA A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 223 HSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRF VD L++NFHLPKSTLLMLVSAF G+ + Y++A+ YRF+SYGD +L +
Sbjct: 283 YRFNVVDRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGDAMVLGRNE 342
>gi|224023490|ref|ZP_03641856.1| hypothetical protein BACCOPRO_00192 [Bacteroides coprophilus DSM
18228]
gi|224016712|gb|EEF74724.1| hypothetical protein BACCOPRO_00192 [Bacteroides coprophilus DSM
18228]
Length = 351
Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats.
Identities = 130/363 (35%), Positives = 190/363 (52%), Gaps = 16/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P RD +RLMVVH + I + D+ + + D +
Sbjct: 1 MKLSQFKFKLPEEKIALHPAKYRDESRLMVVHKSTG---EIEHVMFKDILNYFDDKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK----EKTGARIEVFLLRELNEELRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDARD 176
D + A VID + L F G E ++ + +G PLPP+I RP + D
Sbjct: 114 DDD---SMVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYALGEPPLPPFIH--RPAEPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+QT +AK +G+V P AGLHF+ L+ R+ GI F+T+H G G F + VED
Sbjct: 169 EERFQTIFAKNEGAVTVPAAGLHFSRELMKRMEIKGIDFAFITMHCGLGNFRDIDVEDLT 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE F++A + +N K RG ++ +VGTT +R +ETA DG + + G+TN F
Sbjct: 229 KHKMDSEQMFVNAEACRIVNEAKDRGNKVCAVGTTVMRTIETAVGTDGHLKEFEGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + ++SNF +P ST+LML A+ G E Y A+ YRF +YGD L+
Sbjct: 289 IFPPYDFSVANAMVSNFQMPLSTMLMLKCAYGGYELIMDAYNIALKENYRFGTYGDAMLI 348
Query: 357 FQK 359
K
Sbjct: 349 LDK 351
>gi|262341077|ref|YP_003283932.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Blattabacterium sp. (Blattella germanica) str. Bge]
gi|262272414|gb|ACY40322.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Blattabacterium sp. (Blattella germanica) str. Bge]
Length = 347
Score = 431 bits (1108), Expect = e-119, Method: Composition-based stats.
Identities = 141/361 (39%), Positives = 203/361 (56%), Gaps = 18/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF P + +A P RD ++LMV+H + L DL + DA++
Sbjct: 1 MRTSDFDFGSPLNLLAKFPSQERDESKLMVIHRK---NKKVEHKLFKDLHQYFEEGDALI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN--SWSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + E +I L + P +W V P++ ++ G+ L+F
Sbjct: 58 LNNTKVFPARLFGNK----EKTEAKIEVFLLRELDPKDRTWDVLVDPARKVRVGNKLNFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
L VID + +L +G EL +I +G PLP YI R+ + D
Sbjct: 114 -----YGLTGEVIDNTTSRGRILQLHFNGTHEELIIKIKELGKTPLPKYINRQ--PEKND 166
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +GSVAAPTAGLHF+ +LL +L GI + +TLH+G G+F+PV+VED
Sbjct: 167 EERYQTVYAKKEGSVAAPTAGLHFSKHLLKKLEIKGINLVEITLHLGLGSFLPVEVEDIS 226
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE FI+ T + +N + RI +VGT+S+R +E++ + + +NP+SG+TN F
Sbjct: 227 KHKMDSEKCFINEKTCEVINHAIQKKKRICAVGTSSMRAIESSVSSNKNLNPFSGWTNKF 286
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH+PKSTLLM+ AF G + K YQ AI YRFYSYGD L+
Sbjct: 287 IFPPYNFSIANSMITNFHMPKSTLLMMTVAFAGFDLIMKAYQTAIQEKYRFYSYGDAMLI 346
Query: 357 F 357
Sbjct: 347 L 347
>gi|260433384|ref|ZP_05787355.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Silicibacter lacuscaerulensis ITI-1157]
gi|260417212|gb|EEX10471.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Silicibacter lacuscaerulensis ITI-1157]
Length = 348
Score = 431 bits (1108), Expect = e-119, Method: Composition-based stats.
Identities = 163/360 (45%), Positives = 218/360 (60%), Gaps = 14/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RP PR SARL+V + I+D V +LP +L D +V
Sbjct: 1 MKLSDFDFDLPEDLIATRPANPRTSARLLVAQGDD-----IADDRVFNLPDWLRPGDRLV 55
Query: 61 FNNTKVITAQLNGVRF--CHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L+G R I TL + +W+ +P K ++ G+ + F
Sbjct: 56 LNDTRVIPARLSGRRHRNSAQGPVSAAIEATLLDPQADGTWAALLKPLKKVRVGEEIVF- 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
L A V+++ G+ L F+++G + +R + G +PLPPYIA KRP D RD
Sbjct: 115 ----SGDLSA-VLERVAEGQAYLRFNLTGEDFDRALEQAGAMPLPPYIAAKRPADERDKT 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LL L G++ VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVWARHSGAVAAPTASLHFDEALLKTLTERGVEFTHVTLHVGAGTFLPVKVEDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A + + K+ GGR++ VGTT+LRL+E+A G I PW G T+IFI
Sbjct: 230 KMHAEWGRVSPQAAAEIAATKAAGGRVIPVGTTALRLIESAAR-GGRIEPWEGETDIFIY 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ F D LM+NFHLPKSTLLMLVSA G + ++Y HAI+ YRF+SYGD SLL
Sbjct: 289 PGFTFHVTDALMTNFHLPKSTLLMLVSALMGKDRMLRIYDHAIACRYRFFSYGDASLLIP 348
>gi|126739327|ref|ZP_01755020.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseobacter
sp. SK209-2-6]
gi|126719427|gb|EBA16136.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseobacter
sp. SK209-2-6]
Length = 356
Score = 431 bits (1108), Expect = e-118, Method: Composition-based stats.
Identities = 167/360 (46%), Positives = 221/360 (61%), Gaps = 14/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP + IA RP PR SAR++V + P I D V+DL +L D +V
Sbjct: 1 MKLSDFDFDLPETLIATRPASPRSSARMLV-----ATPQEIHDQTVTDLIDWLKPGDRLV 55
Query: 61 FNNTKVITAQLNG--VRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+L+G R + I TL S SW+ +P K IK G+ + F
Sbjct: 56 LNDTKVIPARLSGLRHRESAQGKTAARIEVTLLEPRSDGSWAGLLKPLKKIKLGERIVFS 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
L A ++ G+ LL F++ G + + ++ G +PLPPYIA KR DA+D
Sbjct: 116 DA-----LSAELVGV-EDGQGLLSFNLQGEDFDAALAQAGAMPLPPYIAAKRAADAQDKT 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +AK G+VAAPTA LHF + LL L G+K VTLHVGAGTF+PVKV+D H
Sbjct: 170 DYQTVWAKNSGAVAAPTASLHFDTALLEALQEKGVKFTHVTLHVGAGTFLPVKVDDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A + K+ GGR++ VGTT+LRL+E+A DG + PW G T+IFI
Sbjct: 230 KMHAEWGKVSEQAASEIAETKAAGGRVIPVGTTALRLIESAAR-DGRVEPWEGETDIFIY 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ F+A D LM+NFHLPKSTLLML+SA G E +++Y HA+ YRF+SYGD SLL
Sbjct: 289 PGFSFQATDALMTNFHLPKSTLLMLISALMGQERVREIYAHAVEGEYRFFSYGDASLLLP 348
>gi|312962926|ref|ZP_07777413.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
fluorescens WH6]
gi|311282953|gb|EFQ61547.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
fluorescens WH6]
Length = 349
Score = 431 bits (1108), Expect = e-118, Method: Composition-based stats.
Identities = 144/358 (40%), Positives = 204/358 (56%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R ++RL+ + + +DL L D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRASRLLTLDGVSGA---LVHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDTHRVLAHVRSSKSPKPGSSILI--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
EA ++ + + L + E+ + VG +PLPPYI RP + D Y
Sbjct: 110 --DGGGEAEMVARHDA---LFELKFA-EEVLPLLERVGHMPLPPYI--DRPDEDSDRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL + + G++ +VTLHVGAGTF PV+V++ +DH M
Sbjct: 162 QTVYSQRLGAVAAPTAGLHFDQPLLDAIAAKGVETAYVTLHVGAGTFQPVRVDNIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + K+RGGR+V+VGTTS+R LE+A DG++ P+SG T+IFI PG
Sbjct: 222 HSEWLEVSQDVVDAVQACKARGGRVVAVGTTSVRSLESAAR-DGVLKPFSGDTDIFIFPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET YQ AI + YRF+SYGD + +
Sbjct: 281 RPFHVVDCLVTNFHLPESTLLMLVSAFAGYPETMAAYQAAIDNGYRFFSYGDAMFITR 338
>gi|323143762|ref|ZP_08078430.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Succinatimonas hippei YIT 12066]
gi|322416475|gb|EFY07141.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Succinatimonas hippei YIT 12066]
Length = 359
Score = 431 bits (1108), Expect = e-118, Method: Composition-based stats.
Identities = 142/366 (38%), Positives = 200/366 (54%), Gaps = 24/366 (6%)
Query: 1 MMV--KEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDA 58
M V +F+FDLP IA P R R++ + N + D DL FL D
Sbjct: 1 MTVLRSDFNFDLPKELIANYPSAERTKCRMLCLDGNTG---ELCDRTFIDLKDFLRPGDL 57
Query: 59 IVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
+VFN+TKVI A+L G + + + + N+ + R SK K G L
Sbjct: 58 LVFNDTKVIPARLYGTK-----KTGGAVELLIERITGLNTALSHIRASKAPKAGSELFI- 111
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
DG L T G++ ++ + G L + VG IPLPPYI +R +A D
Sbjct: 112 --DGGYVLNVT----GRDGDLFMIETADGSSLLDLLDKVGHIPLPPYI--EREDEALDKD 163
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y+K+ G+VAAPTAGLHF + + L S+G+ FVTLHVGAGTF PV+ +D H
Sbjct: 164 RYQTVYSKVPGAVAAPTAGLHFDNAQIEELKSLGVNTAFVTLHVGAGTFQPVREDDIVKH 223
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-----GIINPWSGFT 293
MH E + A A+ + + G R+++VGTT++R LE+A T G I P+ T
Sbjct: 224 HMHKEFVQLPEEVANAVKATHAAGHRVIAVGTTAVRSLESAATYARENGLGEIAPFHNDT 283
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PGY+++ VD L++NFHLP+STL+MLV AF G + T Y HA+ Y+F+SYGD
Sbjct: 284 SIFIYPGYQYQVVDCLITNFHLPESTLIMLVCAFAGYKNTMHAYHHAVKDKYKFFSYGDC 343
Query: 354 SLLFQK 359
+ ++
Sbjct: 344 MFITKR 349
>gi|89256118|ref|YP_513480.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. holarctica LVS]
gi|156502136|ref|YP_001428201.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. holarctica FTNF002-00]
gi|167010805|ref|ZP_02275736.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. holarctica FSC200]
gi|290953183|ref|ZP_06557804.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. holarctica URFT1]
gi|295313598|ref|ZP_06804186.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. holarctica URFT1]
gi|122500926|sp|Q2A472|QUEA_FRATH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|167016407|sp|A7NB92|QUEA_FRATF RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|89143949|emb|CAJ79168.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. holarctica LVS]
gi|156252739|gb|ABU61245.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. holarctica FTNF002-00]
Length = 338
Score = 431 bits (1108), Expect = e-118, Method: Composition-based stats.
Identities = 134/357 (37%), Positives = 208/357 (58%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LP IA P+ RD++RL+ ++ I+D+ +D F+N D +V
Sbjct: 1 MKTDDFDYKLPEELIASYPLENRDASRLLKLNKQTG---EIADYKFTDFIDFINPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV+ A+L G + ++ + +P + + + ++ G ++
Sbjct: 58 FNNSKVMLARLYGSKT-----TGAKLEYLIERIKNPKLFETHIKANRSPAIGSEIYVEDT 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
A V+DK G + L+ ++ + + G IPLPPY+ KR + D Y
Sbjct: 113 ------LAKVLDK--DGGMYLLEIQGDKDIYQLMEEFGHIPLPPYM--KRDDEEFDAERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GSVAA TAGLHF+ L+ ++ G+ + ++TLHVG+GTF PV+V+D + H M
Sbjct: 163 QTVYAQDLGSVAALTAGLHFSKELMQQIKDKGVDIAYITLHVGSGTFKPVQVDDVESHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E+ + Q + K GGR++++GTTS+R LETA ++G I P+ G T+IF+ PG
Sbjct: 223 HAEVISVPVEVCQKIRQTKENGGRVITIGTTSVRSLETA-GQNGQIEPYQGETDIFLYPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F VD +++NFHLPKSTL+MLVSAF E+ K Y+HAI+ YRF+SYGD +F
Sbjct: 282 KKFNVVDAMITNFHLPKSTLIMLVSAFADKEKIIKAYEHAIAERYRFFSYGDAMFIF 338
>gi|171464094|ref|YP_001798207.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Polynucleobacter necessarius subsp. necessarius STIR1]
gi|238692820|sp|B1XRV8|QUEA_POLNS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|171193632|gb|ACB44593.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Polynucleobacter necessarius subsp. necessarius STIR1]
Length = 348
Score = 431 bits (1108), Expect = e-118, Method: Composition-based stats.
Identities = 143/358 (39%), Positives = 197/358 (55%), Gaps = 16/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F+++LP + IA P+ R +RL+ V + ++ D D+ + + D +V
Sbjct: 1 MQLSDFNYELPAALIAQHPLANRTDSRLLEVKADGLNHALLLDRQFKDILSLVKPGDLLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L+G + + + V R SKV+K G I+H +
Sbjct: 61 FNNTKVIPARLHGKKE-----TGGIVELLIERISGEKQTWVQIRASKVLKTGSIVHIHNH 115
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +V G V + + G +PLPPYI + D D Y
Sbjct: 116 AGE---TFSVEIIGYDGRFYEVSFPDNVF--SLLERFGELPLPPYIEHQ--PDGEDAQRY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT AK G+VAAPTAGLHF +L ++ ++G+ VTLHVGAGTF PV+ ED H M
Sbjct: 169 QTVVAKNPGAVAAPTAGLHFDEAILQKIKNLGVNQATVTLHVGAGTFTPVREEDLSKHKM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I T QA+ + K GGR+++VGTTSLR LE+ G TN+FITPG
Sbjct: 229 HYEWFSIPNETLQAIEATKENGGRVIAVGTTSLRALESQAASG----QSGGETNLFITPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y+F+ VD L++NFHLPKSTLLMLVSAF G++ + YQHAI YRF+SYGD L +
Sbjct: 285 YQFKTVDCLLTNFHLPKSTLLMLVSAFAGMDHIRAAYQHAIEQKYRFFSYGDAMFLCR 342
>gi|329894274|ref|ZP_08270160.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [gamma
proteobacterium IMCC3088]
gi|328923205|gb|EGG30527.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [gamma
proteobacterium IMCC3088]
Length = 346
Score = 431 bits (1108), Expect = e-118, Method: Composition-based stats.
Identities = 137/353 (38%), Positives = 192/353 (54%), Gaps = 13/353 (3%)
Query: 4 KEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNN 63
++ FDLP IA P+ R ++RL+ + N ++ +DL + ND +VFNN
Sbjct: 6 SDYYFDLPEHLIAQHPLPDRSASRLLCLDRNSGA---VNHAQFTDLLELVRPNDLLVFNN 62
Query: 64 TKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQ 123
TKVI A++ G + ++ + VS V+ R S+ K G ++ FS+D
Sbjct: 63 TKVIPARMYGQKP-----TGGQLEILVERIVSSQQALVHMRSSRSPKPGSMVEIFSKDRS 117
Query: 124 SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTT 183
A + L + + I G +PLPPYI +R + D YQT
Sbjct: 118 G--VAGEVSVLGREGALFLVEARDEAITALIERCGHMPLPPYI--ERAEEQADLERYQTV 173
Query: 184 YAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSE 243
YAK +G+VAAPTAGLHFT +L L G++ VTLHVGAGTF PVK +D H MH+E
Sbjct: 174 YAKKEGAVAAPTAGLHFTPEILRALKDKGVEFAEVTLHVGAGTFQPVKEDDIRAHTMHTE 233
Query: 244 IGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRF 303
+ + + K RGGR+++VGTTS+R LE+A+ +G + G T IFI PGY F
Sbjct: 234 WFEVADEVVKLVEETKQRGGRVIAVGTTSVRSLESASL-NGRLQSMRGDTEIFIYPGYEF 292
Query: 304 RAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ VD L++NFHLP+STL+MLVSA E Y A+ H YRF+SYGD +
Sbjct: 293 KTVDALITNFHLPESTLIMLVSALADRESVLAAYDEAVRHEYRFFSYGDAMFI 345
>gi|115314592|ref|YP_763315.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. holarctica OSU18]
gi|254367443|ref|ZP_04983469.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. holarctica 257]
gi|122325383|sp|Q0BMK6|QUEA_FRATO RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|115129491|gb|ABI82678.1| queuine tRNA-ribosyltransferase [Francisella tularensis subsp.
holarctica OSU18]
gi|134253259|gb|EBA52353.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Francisella
tularensis subsp. holarctica 257]
Length = 340
Score = 431 bits (1108), Expect = e-118, Method: Composition-based stats.
Identities = 134/357 (37%), Positives = 208/357 (58%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LP IA P+ RD++RL+ ++ I+D+ +D F+N D +V
Sbjct: 3 MKTDDFDYKLPEELIASYPLENRDASRLLKLNKQTG---EIADYKFTDFIDFINPGDLLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV+ A+L G + ++ + +P + + + ++ G ++
Sbjct: 60 FNNSKVMLARLYGSKT-----TGAKLEYLIERIKNPKLFETHIKANRSPAIGSEIYVEDT 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
A V+DK G + L+ ++ + + G IPLPPY+ KR + D Y
Sbjct: 115 ------LAKVLDK--DGGMYLLEIQGDKDIYQLMEEFGHIPLPPYM--KRDDEEFDAERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GSVAA TAGLHF+ L+ ++ G+ + ++TLHVG+GTF PV+V+D + H M
Sbjct: 165 QTVYAQDLGSVAALTAGLHFSKELMQQIKDKGVDIAYITLHVGSGTFKPVQVDDVESHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E+ + Q + K GGR++++GTTS+R LETA ++G I P+ G T+IF+ PG
Sbjct: 225 HAEVISVPVEVCQKIRQTKENGGRVITIGTTSVRSLETA-GQNGQIEPYQGETDIFLYPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F VD +++NFHLPKSTL+MLVSAF E+ K Y+HAI+ YRF+SYGD +F
Sbjct: 284 KKFNVVDAMITNFHLPKSTLIMLVSAFADKEKIIKAYEHAIAERYRFFSYGDAMFIF 340
>gi|86609129|ref|YP_477891.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557671|gb|ABD02628.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus sp. JA-2-3B'a(2-13)]
Length = 392
Score = 431 bits (1108), Expect = e-118, Method: Composition-based stats.
Identities = 148/376 (39%), Positives = 207/376 (55%), Gaps = 28/376 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
++ +D+ LPP +IA PV PRD AR++VV+P+ LP +L D +V
Sbjct: 27 LLTASYDYTLPPDQIAQTPVEPRDQARMLVVYPDR-----HEHRRFCHLPDYLREGDLLV 81
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN-------------SWSVYARPSK 107
N+TKVI A+L G + + L SW V RP K
Sbjct: 82 LNDTKVIPARLFGAK----EPSGARVEVLLLEPCLEGIPAAAQPLPDQAWSWRVLVRPGK 137
Query: 108 VIKKGDILHFFSQDGQ-SRLEATVIDKW-NTGEILLVFSISGI-ELERQISLVGTIPLPP 164
+K GD + F+S+ G S L ATV+ TG ++ F G E + VG IPLPP
Sbjct: 138 RVKVGDRIGFWSKQGSPSGLRATVLALDPETGGRVVQFEWEGAQPFEEILEQVGRIPLPP 197
Query: 165 YIARKRPIDAR--DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHV 222
YI + DYQT +AK GSVAAPTAGLHFT LL RL GI+ ++TL++
Sbjct: 198 YIKASGSPGSGQVRPEDYQTLWAKHPGSVAAPTAGLHFTQELLERLAQKGIQTAYITLNI 257
Query: 223 GAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE 282
G GTF PV+ E +H +HSE + A T A+ ++RGGR+++VGTT +R LETA
Sbjct: 258 GLGTFRPVEAERVTEHRLHSEWLKVPAETVAAIQKAQARGGRVIAVGTTVVRSLETAAAS 317
Query: 283 DGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAIS 342
G + PW G +++FI PGY +R + L++NFHLP+S+L+MLV+A G + +Y+ A+
Sbjct: 318 -GTLQPWQGKSDLFIYPGYSWRVIQGLVTNFHLPRSSLMMLVAALIGRQRLLDLYREAVD 376
Query: 343 HAYRFYSYGDTSLLFQ 358
YRFYS+GD L+
Sbjct: 377 QGYRFYSFGDGMLILP 392
>gi|300868110|ref|ZP_07112745.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Oscillatoria sp. PCC 6506]
gi|300333884|emb|CBN57925.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Oscillatoria sp. PCC 6506]
Length = 369
Score = 430 bits (1107), Expect = e-118, Method: Composition-based stats.
Identities = 149/370 (40%), Positives = 212/370 (57%), Gaps = 24/370 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++ +++ LPP RIA PV PRDS+RL+VV P + +LP FL D +V
Sbjct: 10 LKLEAYNYVLPPERIAQNPVVPRDSSRLLVVD----SPHSHQHSIFRELPNFLKRGDLLV 65
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L N W +P K +K G + F
Sbjct: 66 LNNTRVLPARLKGRKPNGYP-----VEALLMEERERNCWLALVKPGKRLKPGARIEFDPL 120
Query: 121 DGQ----SRLEATVIDKWN-TGEILLVFSIS-GIELERQISLVGTIPLPPYIARKRPIDA 174
+G+ RL ATV+++ TG LL F + G+ L + + G IPLPPYI + +
Sbjct: 121 NGEIPNGDRLSATVLERDEATGGRLLQFEVPVGMSLVQLLPEYGHIPLPPYIKNSQALGE 180
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
+ YQT YA+ G++AAPTAGLHFT LL L GI+ FVTLHVG GTF PV+VED
Sbjct: 181 Q----YQTIYAEKLGAIAAPTAGLHFTDELLKGLQEKGIEQAFVTLHVGVGTFRPVEVED 236
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-----INPW 289
H MH E + A T + ++ GGRI++VGTT++R LE A + +
Sbjct: 237 LTTHQMHREWVEVPAITVDKIRQTQANGGRIIAVGTTAVRALEGAAAAAQKQNLPSLQAF 296
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
G T++FI PGYR++ V+ L++NFHLP+S+LLMLVSA G + ++Y+ AI+H YRFYS
Sbjct: 297 CGHTDLFIYPGYRWQVVEGLITNFHLPQSSLLMLVSAMIGRQRLFELYEEAIAHQYRFYS 356
Query: 350 YGDTSLLFQK 359
+GD L+ +
Sbjct: 357 FGDAMLILPE 366
>gi|161830489|ref|YP_001597061.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Coxiella
burnetii RSA 331]
gi|189038518|sp|A9NDS1|QUEA_COXBR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|161762356|gb|ABX77998.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Coxiella
burnetii RSA 331]
Length = 343
Score = 430 bits (1107), Expect = e-118, Method: Composition-based stats.
Identities = 129/355 (36%), Positives = 192/355 (54%), Gaps = 18/355 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+FD++LP IA RP+ R +RL+ + + +S + + ND +V
Sbjct: 6 KTSDFDYNLPVELIAQRPLADRSGSRLLYIDRSRRT---VSHRQFNGFVEQVKPNDLVVL 62
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKVI A+L G + + ++ C + +S + + + R SK K G +
Sbjct: 63 NDTKVIPARLFGHK-----QTGGKVECLVERILSKDRFLAHIRASKAPKLGSQIIIADN- 116
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ + ++N ++ S + + + G IPLPPYI +R D D YQ
Sbjct: 117 ----FKIIIEGRYNDLFECVLHSSA--SILDLLYQHGRIPLPPYI--QREPDKDDQARYQ 168
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A+ G+VAAPTAGLHF L G + +VTLHVGAGTF PV+ + DH MH
Sbjct: 169 TIFAERAGAVAAPTAGLHFNEETFDALRKKGAAITYVTLHVGAGTFQPVRADSLADHRMH 228
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E + A+ + GR+++VGTT +R LETA T++ P++G T++FI PG+
Sbjct: 229 HEWMEVSKAVCDAIAKCRKNNGRVIAVGTTVMRCLETA-TKNSECRPYAGETDLFIYPGF 287
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+F VD L++NFHLPKSTLLMLV AF G E + YQ A+ + YRF+SYGD L+
Sbjct: 288 QFNCVDALLTNFHLPKSTLLMLVCAFGGYELVMEAYQKAVENRYRFFSYGDAMLI 342
>gi|304388396|ref|ZP_07370505.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis ATCC 13091]
gi|304337608|gb|EFM03768.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis ATCC 13091]
gi|319409824|emb|CBY90132.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queuosine
biosynthesis protein QueA) [Neisseria meningitidis WUE
2594]
Length = 356
Score = 430 bits (1107), Expect = e-118, Method: Composition-based stats.
Identities = 150/360 (41%), Positives = 208/360 (57%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+ L+V P+ + + D + DLP ++ + D +V
Sbjct: 11 MDISDFDFTLPEHLIAQHPPEVRGSSHLLVALPD----MPLQDRVFGDLPDYVEAGDVLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 67 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDSHTALAHIRSSKSPKPGMGLVF--- 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 119 --EGGIRAVMVGR--EGELFCLRFEGGETVYELLEQNGHLPLPPYI--ERAADADDDSRY 172
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 173 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 232
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + TA A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 233 HSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 292
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRF D L++NFHLPKSTLLMLVSAF G+ + Y++A+ YRF+SYGD +L +
Sbjct: 293 YRFNVADRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGDAMVLGRNE 352
>gi|212212409|ref|YP_002303345.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Coxiella
burnetii CbuG_Q212]
gi|226713836|sp|B6IZS2|QUEA_COXB2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|212010819|gb|ACJ18200.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Coxiella
burnetii CbuG_Q212]
Length = 343
Score = 430 bits (1106), Expect = e-118, Method: Composition-based stats.
Identities = 130/355 (36%), Positives = 193/355 (54%), Gaps = 18/355 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+FD++LP IA RP+ R +RL+ + + +S + + ND +V
Sbjct: 6 KTSDFDYNLPVELIAQRPLADRSGSRLLYIDRSRRT---VSHRQFNGFVEQVKPNDLVVL 62
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKVI A L G + + ++ C + +S + + + R SK K G +
Sbjct: 63 NDTKVIPAGLFGHK-----QTGGKVECLVERILSKDRFLAHIRASKAPKLGSQIIIADN- 116
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ + ++N ++ S + + + G IPLPPYI +R D D YQ
Sbjct: 117 ----FKIIIEGRYNDLFECVLHSSA--SILDLLYQHGRIPLPPYI--QREPDKDDQARYQ 168
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A+ G+VAAPTAGLHF L G + +VTLHVGAGTF PV+ + DH MH
Sbjct: 169 TIFAERAGAVAAPTAGLHFNEETFDALRKKGAAITYVTLHVGAGTFQPVRADSLADHRMH 228
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E + A+ + GR+++VGTT +R LETA T++G P++G T++FI PG+
Sbjct: 229 HEWMEVSKAVCDAIAKCRKNNGRVIAVGTTVMRCLETA-TKNGECRPYAGETDLFIYPGF 287
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+F+ VD L++NFHLPKSTLLMLV AF G E + YQ A+ + YRF+SYGD L+
Sbjct: 288 QFKCVDALLTNFHLPKSTLLMLVCAFGGYELVMEAYQKAVENRYRFFSYGDAMLI 342
>gi|88799557|ref|ZP_01115133.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Reinekea
sp. MED297]
gi|88777642|gb|EAR08841.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Reinekea
sp. MED297]
Length = 353
Score = 430 bits (1106), Expect = e-118, Method: Composition-based stats.
Identities = 141/358 (39%), Positives = 201/358 (56%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDF LP IA P R +RL+ +H + + D+ + D +V
Sbjct: 1 MHVNDFDFQLPDELIARHPAEQRTGSRLLHLHGDSG---QVQHRHFPDIEQLIEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + R ++ + S ++ + + +K K G L
Sbjct: 58 FNNTRVIPARLFGQK-----RSGGKVELLIERMTSDHTALAHIKANKSPKAGTELI---M 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+G +LE T + V + L + G +PLPPY+ R+ D Y
Sbjct: 110 EGDIQLEVT----GRDQNLFCVRCTNPEPLVDLLDQHGHMPLPPYLEREDDDDD--RERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +G+VAAPTAGLHF LL+RL G+ FVTLHVGAGTF PVK ++ DH+M
Sbjct: 164 QTVYAQRKGAVAAPTAGLHFDDALLARLKDKGVNTAFVTLHVGAGTFQPVKADNIKDHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + + + + K+ G R+++VGTTS+R LETA ++ G I P++G TNIFI PG
Sbjct: 224 HAEWIDVPDSVVEQIRTTKAAGKRVIAVGTTSVRSLETA-SQSGQIEPFTGDTNIFIYPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRF+ VD L++NFHLPKSTL+ML+SAF G + Y+ AI YRF+SYGD + +
Sbjct: 283 YRFKTVDALLTNFHLPKSTLIMLISAFAGKDHVMAAYEAAIRERYRFFSYGDAMFVTR 340
>gi|86749987|ref|YP_486483.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodopseudomonas palustris HaA2]
gi|86573015|gb|ABD07572.1| Queuosine biosynthesis protein [Rhodopseudomonas palustris HaA2]
Length = 384
Score = 430 bits (1106), Expect = e-118, Method: Composition-based stats.
Identities = 191/363 (52%), Positives = 246/363 (67%), Gaps = 11/363 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M FDFDLP IALRP+ PRD+AR++VV P + D +V DLPA L D +V
Sbjct: 27 MRTDLFDFDLPAENIALRPMSPRDAARMLVVRPGAAP----EDRVVRDLPALLQPGDQLV 82
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI AQL+G R E +I TL R+ + W +P+K + +GD++ F
Sbjct: 83 VNDTRVIAAQLSGRRI--GRATEPKIEATLIKRLDGSRWQALVKPAKKLAEGDVVRF-GH 139
Query: 121 DGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
DG+ L+ATV K GE+ L F G L++ I+ +G PLPPYIA KR D RD
Sbjct: 140 DGRVCLLGHLDATVEVKGEAGEVTLAFCFHGPALDQAIAELGATPLPPYIASKRAPDDRD 199
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT +A +G+VAAPTAGLHFT L + L + G+ V+ VTLHVGAGTF+PVK +DT
Sbjct: 200 AADYQTMFAANEGAVAAPTAGLHFTPELDAALAARGVTVHRVTLHVGAGTFLPVKTDDTA 259
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+H MH+E G I TA ALN+ +++GGRIV+VGTTSLRLLE+A +DG I P++ T IF
Sbjct: 260 EHRMHAEWGTIGRDTAAALNAARAQGGRIVAVGTTSLRLLESAARDDGTIAPFADETAIF 319
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGY+FRAVD+LM+NFHLP+STL MLVSAFCG+E + Y+HAI YRFYSYGD SLL
Sbjct: 320 ITPGYKFRAVDVLMTNFHLPRSTLFMLVSAFCGLETMQAAYRHAIETGYRFYSYGDASLL 379
Query: 357 FQK 359
F++
Sbjct: 380 FRE 382
>gi|300690474|ref|YP_003751469.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ralstonia
solanacearum PSI07]
gi|299077534|emb|CBJ50160.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ralstonia
solanacearum PSI07]
Length = 350
Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats.
Identities = 148/360 (41%), Positives = 203/360 (56%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FDFDLPP IA + R ++RL+ V + P D +DL +L D ++
Sbjct: 2 LTLSDFDFDLPPELIAQTALPDRTASRLLAVRRDAQGPH-FDDRQFADLVDYLRPGDLLI 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+ G + +I + + + R SK G L
Sbjct: 61 FNDTRVIKARFFGHKAS-----GGKIEVLVERLLDEYTVLAQIRSSKSPVAGSTLRLADA 115
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ TV + L + I G +PLPPYI D+ D Y
Sbjct: 116 -----FDVTVGPRHEPFFTLRFPQPA----LELIEQYGRLPLPPYIEH--TPDSFDETRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF L +RL ++G++ F+TLHVGAGTF PV+VE+ +H M
Sbjct: 165 QTVYARNPGAVAAPTAGLHFDDALFARLDAMGVRRGFLTLHVGAGTFSPVRVENIAEHRM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I A+A+ + ++ GGRI++VGTTS+R LE+A DG + SG T+IFITPG
Sbjct: 225 HSEWYAISPALAEAIRATRAAGGRIIAVGTTSMRALESAARPDGTLAAGSGETDIFITPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI+ YRF+SYGD L +
Sbjct: 285 YRFRLVDALVTNFHLPKSTLLMLVSAFAGLETIRAAYRHAIAQRYRFFSYGDAMFLTRAE 344
>gi|294635291|ref|ZP_06713790.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Edwardsiella tarda ATCC 23685]
gi|291091325|gb|EFE23886.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Edwardsiella tarda ATCC 23685]
Length = 357
Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats.
Identities = 135/360 (37%), Positives = 197/360 (54%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R + RL+ + + +D+ L D +V
Sbjct: 1 MRVSDFTFELPDELIARYPQAQRSACRLLSLDGPTGKR---EHGVFTDIVDKLQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKES-----GGKIEVLVERVLDRARVLAHVRASKAPKPGAALLLGDN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT++ + +T + + ++ ++ G +PLPPYI RP D D Y
Sbjct: 113 E---EIRATMLARHDT--LFELGFEDERDVLTILNAAGHMPLPPYI--DRPDDEADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+ G+VAAPTAGLHF LL RL + G+++ FVTLHVGAGTF PV+VE +DH+M
Sbjct: 166 QTVYSTRPGAVAAPTAGLHFDQPLLDRLRAKGVEMAFVTLHVGAGTFQPVRVESIEDHVM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLR--LLETATTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R A ++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQAVVDAVLACKARGNRVIAVGTTSVRSLESAAAASQSALIAPFFDDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY ++ +D L++NFHLP+STL+MLVSAF G T Y A++ YRF+SYGD + +
Sbjct: 286 PGYHYQVIDALITNFHLPESTLIMLVSAFAGYRHTLDAYHEAVAQQYRFFSYGDAMYITR 345
>gi|238787973|ref|ZP_04631769.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
frederiksenii ATCC 33641]
gi|238723921|gb|EEQ15565.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
frederiksenii ATCC 33641]
Length = 363
Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats.
Identities = 139/349 (39%), Positives = 205/349 (58%), Gaps = 17/349 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + +++ + +DL L D +V
Sbjct: 6 MRVADFSFELPESLIAHYPQPQRSGCRLLSLDGPTG---MLTHGIFTDLLDKLEPGDLLV 62
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + + SK K G L
Sbjct: 63 FNNTRVIPARLFGRKAS-----GGKLEVLVERVLDDSRVLAHIKASKAPKPGTELLLGDD 117
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT++ + +T + + ++ ++LVG +PLPPYI RP + D Y
Sbjct: 118 E---SIRATMLARHDT--LFELRFDDERDVFTILNLVGHMPLPPYI--DRPDEDADRELY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L GI++ FVTLHVGAGTF PV+V+ ++HIM
Sbjct: 171 QTVYSQRPGAVAAPTAGLHFDEPLLAALRDKGIEMAFVTLHVGAGTFQPVRVDTIEEHIM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+V+VGTTS+R LE+A +E+G+I+P+ G T IFI
Sbjct: 231 HSEYAEVPQEVVDAVLACKARGNRVVAVGTTSVRSLESAARASENGLISPFFGDTRIFIY 290
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
PGY ++ VD L++NFHLP+STL+MLVSAF G + T YQ A++ YRF
Sbjct: 291 PGYHYQVVDALVTNFHLPESTLIMLVSAFAGYKNTMNAYQQAVAEQYRF 339
>gi|253995831|ref|YP_003047895.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylotenera mobilis JLW8]
gi|253982510|gb|ACT47368.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylotenera mobilis JLW8]
Length = 347
Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats.
Identities = 136/356 (38%), Positives = 202/356 (56%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++FDF LP S IA P R ++R++ ++ S ++D D P F + D ++
Sbjct: 4 MKTQDFDFYLPSSLIAQHPSSERTASRMLYLN---STASKLTDKQFLDFPDFFKAGDLLI 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + N + + ++ N+ + R S+ K G +
Sbjct: 61 FNDTRVIKARLFGNKHSGGN-----VEVLIERVINQNTAYAHVRASRSPKVGSRITLSDA 115
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ V + + + + +S + + G +PLPPYI D Y
Sbjct: 116 -----FDVEVTARHDD--LFELRFLSEDSVFELLEQHGALPLPPYITHG--ATDHDEERY 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK G+VAAPTAGLHF + +L +L + G+ + +VTLHVGAGTF PV+V+ DH M
Sbjct: 167 QTVYAKHLGAVAAPTAGLHFNTEILEQLKAKGVNIAYVTLHVGAGTFQPVRVDSVADHKM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE+ + T + + K+ GG + ++GTT++R LE+A +G + G T+IFITPG
Sbjct: 227 HSELFHVPTETVALIEATKANGGIVTAIGTTAMRALESAAR-NGTLAAGEGDTDIFITPG 285
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF VD L++NFHLPKSTLLMLVSAF G + +K Y HA++ YRF+SYGD L+
Sbjct: 286 YRFNVVDRLLTNFHLPKSTLLMLVSAFAGTDNIRKAYAHAVAGEYRFFSYGDAMLI 341
>gi|157363524|ref|YP_001470291.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Thermotoga
lettingae TMO]
gi|157314128|gb|ABV33227.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Thermotoga
lettingae TMO]
Length = 329
Score = 430 bits (1105), Expect = e-118, Method: Composition-based stats.
Identities = 141/357 (39%), Positives = 195/357 (54%), Gaps = 28/357 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD+ LP IA PV PRD++RLM+++ I + D+ +LN D +V
Sbjct: 1 MKVSDFDYILPDELIAQNPVEPRDTSRLMILNRKSRN---IEHRIFRDIVEYLNPEDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L + I L ++ N W+ +P K +K GDIL+F
Sbjct: 58 LNNTRVIPARLFAKKANST------IEVLLVEKIGTNLWNCMVKPGKKVKPGDILNF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
A + K + G L F + + + +G PLPPY+ K PI Y
Sbjct: 109 ---ETFTAECLSKADQGMRTLKFETT----DEDLFKLGEAPLPPYVHSKIPI-----ERY 156
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAKI G++A+PTAGLHFT LL ++ S G+ + +TLHVG GTF PVK + DH M
Sbjct: 157 QTIYAKINGAIASPTAGLHFTEELLRKIKSTGVTIAEITLHVGIGTFRPVKTQFVQDHKM 216
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I T + + K GGR+++ GTT +R LE E GI G T +FI P
Sbjct: 217 HPERYQISQDTVKLVEKTKRSGGRVIATGTTVVRALE----EYGINGKLEGETRLFIYPP 272
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+ VD +++NFHLPKSTLLMLV+AF G + + Y+ AI YRFYS+GD +
Sbjct: 273 FNFKIVDAMITNFHLPKSTLLMLVAAFAGYDFIMEAYREAIEKRYRFYSFGDAMFIT 329
>gi|258514406|ref|YP_003190628.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Desulfotomaculum acetoxidans DSM 771]
gi|257778111|gb|ACV62005.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Desulfotomaculum acetoxidans DSM 771]
Length = 333
Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats.
Identities = 129/344 (37%), Positives = 189/344 (54%), Gaps = 17/344 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +++F+++LP IA P RD +RLMV+ + I ++L +L D +V
Sbjct: 3 LKLEDFNYNLPEELIAQEPSANRDESRLMVLFRD---NPQIEHRRFNNLVEYLKPGDVLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G++ + L ++ N W +P + + G L F
Sbjct: 60 INDTKVMPARLYGLK-----DTGATVEVLLLKQLDGNRWETLVKPGRKARIGTTLTFAG- 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+L V G ++ F G + +G +PLPPYI + D Y
Sbjct: 114 ---GKLTGLVAGDTEAGGRVIDFLYQG-SFVEILEQIGIMPLPPYIKK----IPADPGRY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA GS AAPTAGLHFT LL ++ +G+++ V LHVG TF PVKVE+ +H M
Sbjct: 166 QTVYANRFGSAAAPTAGLHFTDQLLDKIKDLGVEIVPVLLHVGLDTFRPVKVENIREHRM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I A A +N+ K+RGGRI++VGTT+ R LE++ +DG + SG+T IFI PG
Sbjct: 226 HSEYYEISAGVADKINAAKARGGRIIAVGTTTTRCLESSAGDDGRLKTGSGWTKIFIYPG 285
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHA 344
YRF+ +D L++NFHLP STL+MLVSA G ++ + Y A+
Sbjct: 286 YRFKIIDGLITNFHLPCSTLIMLVSALSGRDKILEAYNTAVKKK 329
>gi|73748606|ref|YP_307845.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Dehalococcoides sp. CBDB1]
gi|289432632|ref|YP_003462505.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Dehalococcoides sp. GT]
gi|91207422|sp|Q3ZXG6|QUEA_DEHSC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|73660322|emb|CAI82929.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase
[Dehalococcoides sp. CBDB1]
gi|288946352|gb|ADC74049.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Dehalococcoides sp. GT]
Length = 343
Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats.
Identities = 139/359 (38%), Positives = 200/359 (55%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD++LP IA +PV PRDS+RL+V++ +++ + ++ + D +V
Sbjct: 1 MKTSDFDYNLPQEYIAQKPVEPRDSSRLLVLNRQSG---ELTNRIFGEITDYFKPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+++V+ A++ G++ +I L R W +P K K G I+ +
Sbjct: 58 MNDSRVLPARIKGIK----QDTSAKIEILLLKRDGEGCWEALLKPGKRTKPGTIIDIHQK 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++A V+ G LL FS E + +G +PLPPYI D Y
Sbjct: 114 GGVVSIQAEVLADKEDGIKLLRFSD-----ETHLMKLGEVPLPPYIHTPVA----DPERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA GSVAAPTAGLHFT LL RL +G+ +VTLH+G TF PVK ED DH +
Sbjct: 165 QTVYALTNGSVAAPTAGLHFTPELLKRLTEMGVICTYVTLHIGLDTFRPVKEEDPKDHKI 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
H E G + TA A+ K G R+ VGT++ RL+E A+ ++ +I +SG+ ++FI
Sbjct: 225 HREYGILSKETASAICCAKETGKRVFCVGTSATRLVEQASHLSQTSLITSYSGWADLFIL 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+FR D ++NFHLP+ST LML SAF G +K Y+ AIS YRFYS+GD L+
Sbjct: 285 PGYKFRVADCFITNFHLPRSTPLMLTSAFAGWPFLRKAYEKAISEHYRFYSFGDAMLIL 343
>gi|83747288|ref|ZP_00944330.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ralstonia
solanacearum UW551]
gi|207744280|ref|YP_002260672.1| s-adenosylmethionine:trna ribosyltransferase-isomerase (queuosine
biosynthesis protein quea) [Ralstonia solanacearum
IPO1609]
gi|83726112|gb|EAP73248.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ralstonia
solanacearum UW551]
gi|206595685|emb|CAQ62612.1| s-adenosylmethionine:trna ribosyltransferase-isomerase (queuosine
biosynthesis protein quea) [Ralstonia solanacearum
IPO1609]
Length = 362
Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats.
Identities = 148/360 (41%), Positives = 204/360 (56%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FDFDLPP IA + R ++RL+ VH + + D +DL +L D +V
Sbjct: 8 LTLSDFDFDLPPELIAQTALPDRTASRLLAVHRD-APGTHFDDRQFADLVDYLRPGDLLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+ G + I + + ++ R SK G L
Sbjct: 67 FNDTRVIKARFFGHKAS-----GGRIEVLVERLLDEHTVLAQIRSSKSPVTGSRLRLADA 121
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ TV + L + I G +PLPPYI D+ D Y
Sbjct: 122 -----FDVTVGPRQEPFFTLRFPQPA----LELIEQYGRLPLPPYIEH--TPDSFDETRY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF L +RL ++G++ F+TLHVGAGTF PV+VE+ +H M
Sbjct: 171 QTVYARTPGAVAAPTAGLHFDDALFARLDAMGVRRGFLTLHVGAGTFSPVRVENIAEHRM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I A+A+ + ++ GGR+++VGTTS+R LE+A DG + SG T+IFITPG
Sbjct: 231 HSEWYAISPELAEAIRATRAAGGRVIAVGTTSMRALESAAQPDGTLAAGSGETDIFITPG 290
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI+ YRF+SYGD L +
Sbjct: 291 YRFRLVDALVTNFHLPKSTLLMLVSAFAGLETIRAAYRHAIAQRYRFFSYGDAMFLTRAE 350
>gi|225850942|ref|YP_002731176.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Persephonella marina EX-H1]
gi|225644878|gb|ACO03064.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Persephonella marina EX-H1]
Length = 337
Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats.
Identities = 140/356 (39%), Positives = 197/356 (55%), Gaps = 21/356 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ ++D+ LP IA PV PRDS RLMV++ I + D+ +L D +V
Sbjct: 3 RLSDYDYRLPKELIAKYPVEPRDSCRLMVLNRKERT---IEHRIFRDIGDYLKEGDLLVL 59
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKVI A+L G + +I L V+ N W + K +K+G ++
Sbjct: 60 NDTKVIPARLIGRKE-----TGAKIEIFLLKPVTENVWEALIKNIKRLKEGQVVIISED- 113
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+++K + G+ ++ + G +++ I G IPLPPYI +R + +D YQ
Sbjct: 114 ----FRVKLLEKLDEGKAVVQ--LVGEDIKYLIEKYGHIPLPPYI--EREDEDKDRDYYQ 165
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +AK +G+VA+PTAGLHFT LL +L GIK FVTLHVG GTF P+ VED H MH
Sbjct: 166 TVFAKKEGAVASPTAGLHFTEELLEKLKEKGIKTAFVTLHVGLGTFRPITVEDITKHKMH 225
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E I T + K RG +V+VGTT +R LET GF++IFI P Y
Sbjct: 226 EEFYQIPEETLDLIRETKERGRSVVAVGTTVVRTLETYAQTGKK----EGFSDIFIYPPY 281
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+ VD +++NFHLPKSTLL+LVSAF G + + Y+ A+ YRF+SYGD L+
Sbjct: 282 DFKIVDSMITNFHLPKSTLLLLVSAFAGRDFILEAYREAVEKRYRFFSYGDAMLIL 337
>gi|225419694|ref|ZP_03761997.1| hypothetical protein CLOSTASPAR_06032 [Clostridium asparagiforme
DSM 15981]
gi|225041658|gb|EEG51904.1| hypothetical protein CLOSTASPAR_06032 [Clostridium asparagiforme
DSM 15981]
Length = 318
Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats.
Identities = 137/318 (43%), Positives = 188/318 (59%), Gaps = 13/318 (4%)
Query: 41 ISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWS 100
++ + D+ +L D +V N+TKVI A+L GV+ +I L R + W
Sbjct: 2 VTHRVFRDIVEYLRPGDCLVINDTKVIPARLMGVKA----DTGAKIEVLLLKRRENDIWE 57
Query: 101 VYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTI 160
+P K K G L F G L TV++ + G L+ F GI E + +G +
Sbjct: 58 TLVKPGKKAKPGTELSF----GDGLLTGTVVETVDDGNRLIQFHYEGI-FEEILDQLGQM 112
Query: 161 PLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTL 220
PLPPYI + +D YQT YAK +GS AAPTAGLHFT+ LL + +G+K+ VTL
Sbjct: 113 PLPPYITHQ----LKDKNRYQTVYAKHEGSAAAPTAGLHFTNELLKEIGDMGVKIAHVTL 168
Query: 221 HVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT 280
HVG GTF PVKVE+ DH MHSE ++ A +N K+ GGR++ VGTTS R +E+A+
Sbjct: 169 HVGLGTFRPVKVENVLDHHMHSEFYVVEESEAAKVNETKAAGGRVICVGTTSCRTVESAS 228
Query: 281 TEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHA 340
TEDG++ +G+T IFI PGYRF+ +D L++NFHLP+STL+MLVSA G E Y+ A
Sbjct: 229 TEDGVLKAGTGWTEIFIYPGYRFKILDALITNFHLPESTLVMLVSALAGREHILAAYEEA 288
Query: 341 ISHAYRFYSYGDTSLLFQ 358
I YRF+S+GD +
Sbjct: 289 IRERYRFFSFGDAMFIAP 306
>gi|78485678|ref|YP_391603.1| S-adenosylmethionine [Thiomicrospira crunogena XCL-2]
gi|91207331|sp|Q31FZ4|QUEA_THICR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|78363964|gb|ABB41929.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Thiomicrospira crunogena XCL-2]
Length = 351
Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats.
Identities = 141/362 (38%), Positives = 213/362 (58%), Gaps = 20/362 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F+F+LP + IA +P R +RL+V++ + S +SD D+ +++N ND ++
Sbjct: 1 MRRQDFNFELPEALIAQQPAKERTQSRLLVMNADGS----VSDCHFPDILSYVNENDCLI 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L G + ++ + + + R S K G L
Sbjct: 57 FNNTKVIPARLFGQKL-----TGGKVELLIERVLDERRVLTHIRSSNAPKSGAKLRI--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIEL--ERQISLVGTIPLPPYIARKRPIDARDYV 178
+ +A V+ + + + EL I G +PLPPYI +R D
Sbjct: 109 --EEAFDAEVLGREGALFEVQLSKDEAPELTALELIEAHGHMPLPPYI--EREDQLEDKE 164
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT Y++ G+VAAPTAGLHF ++LL ++ + G FVTLHVGAGTF PV+V+D +H
Sbjct: 165 RYQTVYSEKPGAVAAPTAGLHFDNDLLDKIKAKGAAAGFVTLHVGAGTFKPVQVDDISEH 224
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIF 296
+MHSE+ + T + + + +GGR+++VGTTS+R LE+A +E+G + P+ G T+IF
Sbjct: 225 VMHSEVIEVLPETVELIKQTRQKGGRVIAVGTTSVRCLESAASFSENGELAPYQGETDIF 284
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGY F+ VD+L++NFHLP+STL+MLVSA G + T + Y HA+ YRF+SYGD L+
Sbjct: 285 ITPGYDFKVVDVLLTNFHLPESTLIMLVSALAGYDRTMQAYAHAVEQKYRFFSYGDAMLV 344
Query: 357 FQ 358
Sbjct: 345 HP 346
>gi|299065736|emb|CBJ36912.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ralstonia
solanacearum CMR15]
Length = 362
Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats.
Identities = 148/360 (41%), Positives = 201/360 (55%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FDFDLPP IA + R ++RL+ + D +DL +L D +V
Sbjct: 8 LTLSDFDFDLPPELIAQTALPDRTASRLLAARRDAQD-THFDDRQFADLVDYLRPGDLLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+ G + I + + ++ R SK G L
Sbjct: 67 FNDTRVIKARFFGHKAS-----GGRIEVLVERLLDEHTVLAQIRSSKSPVAGSTLRLADA 121
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ TV + L + I G +PLPPYI D+ D Y
Sbjct: 122 -----FDVTVGPRHEPFFTLRFPQPA----LELIEQYGRLPLPPYIEH--TPDSFDETRY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF L +RL ++G++ F+TLHVGAGTF PV+VE+ +H M
Sbjct: 171 QTVYARTPGAVAAPTAGLHFDDALFARLDAMGVRRGFLTLHVGAGTFSPVRVENIAEHRM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I A+A+ + ++ GGRIV+VGTTS+R LE+A DG + SG T+IFITPG
Sbjct: 231 HSEWYAISPELAEAIRATRAAGGRIVAVGTTSMRALESAAQPDGTLAAGSGETDIFITPG 290
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI+ YRF+SYGD L +
Sbjct: 291 YRFRLVDALVTNFHLPKSTLLMLVSAFAGLETIRAAYRHAIAQRYRFFSYGDAMFLTRAE 350
>gi|218767560|ref|YP_002342072.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis Z2491]
gi|21263920|sp|Q9JW05|QUEA_NEIMA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|121051568|emb|CAM07866.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Neisseria meningitidis Z2491]
Length = 346
Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats.
Identities = 150/360 (41%), Positives = 208/360 (57%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+ L+V P+ + + D + DLP ++ + D +V
Sbjct: 1 MDISDFDFTLPEHLIAQHPPEVRGSSHLLVALPD----MPLQDRVFGDLPDYVEAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDSHTALAHIRSSKSPKPGMGLVF--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 109 --EGGIRAVMVGR--EGELFCLRFEGGETVYELLEQNGHLPLPPYI--ERAADADDDSRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 163 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + TA A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 223 HSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRF D L++NFHLPKSTLLMLVSAF G+ + Y++A+ YRF+SYGD +L +
Sbjct: 283 YRFNVADRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGDAMVLGRNE 342
>gi|90416765|ref|ZP_01224695.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [marine
gamma proteobacterium HTCC2207]
gi|90331518|gb|EAS46754.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [marine
gamma proteobacterium HTCC2207]
Length = 348
Score = 428 bits (1102), Expect = e-118, Method: Composition-based stats.
Identities = 144/356 (40%), Positives = 197/356 (55%), Gaps = 20/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M F FDLP IA +P R +RL+ + S + +DL + + D +V
Sbjct: 1 MRRDLFQFDLPDELIARQPAEQRQGSRLLYLD---SASEDLRHQQFTDLLSHIEPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L G + +I + +S +S + R SK K G+ L F
Sbjct: 58 FNNTKVIAARLFGQKES-----GGKIEVLVERVLSTDSVLAHIRASKSPKPGNQLLF--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
++ A ++ + + L S L+ + +G +PLPPYI R D Y
Sbjct: 110 --ENGYSAEMLGRSDA---LFELRFSAPVLD-VLDQIGHMPLPPYI--DRADTEEDQSRY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA G+VAAPTAGLHF +L+ + + G K+ FVTLHVGAGTF PV+ ++ DH M
Sbjct: 162 QTVYADQLGAVAAPTAGLHFDDQMLADIKAKGAKIAFVTLHVGAGTFQPVRADNIHDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + + K+ GGR+V+VGTTS+R LETA + G I P+ G TNIFI PG
Sbjct: 222 HTEWLQVSDEVCAQVRDTKAAGGRVVAVGTTSVRCLETAASS-GSIGPFEGDTNIFIFPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF VD L++NFHL +STLLMLVSAF G + + Y A++ YRF+SYGD L
Sbjct: 281 YRFNVVDALLTNFHLSESTLLMLVSAFAGYKPIMQAYSEAVAERYRFFSYGDAMFL 336
>gi|330721710|gb|EGG99709.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [gamma
proteobacterium IMCC2047]
Length = 349
Score = 428 bits (1102), Expect = e-118, Method: Composition-based stats.
Identities = 140/360 (38%), Positives = 196/360 (54%), Gaps = 22/360 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F +DLP IAL P R ++RL+ V S + SDLP ++ +D IV
Sbjct: 1 MQLSDFHYDLPKELIALYPQDERSASRLLCVDRETGGT---SHRIFSDLPELISPDDLIV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + ++ + NS R SK K G +
Sbjct: 58 FNNTKVMPARLYGHKA-----TGGKVELLIERITDTNSAICQIRASKAPKPGMRISIAEN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ V + ++ + S L + G +PLPPYI R + D Y
Sbjct: 113 -----VWLEVTGREDS---FFLISSGEQPLLMLLDEHGHMPLPPYIERD--DENFDRERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF LL R+ +G+ + +VTLHVGAGT+ PV+V+D DH M
Sbjct: 163 QTLFAERPGAVAAPTAGLHFDEPLLQRIREMGVAIGYVTLHVGAGTYQPVRVDDIQDHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA---TTEDG-IINPWSGFTNIF 296
HSE +DA + + + + RGG++++VGTT +R LETA E G + P++G T+IF
Sbjct: 223 HSEYLEVDALVCEQIQACRDRGGKVIAVGTTCVRSLETASMKAREQGLEMAPYAGDTDIF 282
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PG F VD +++NFHLP+STLLMLVSAF E Y AI YRF+SYGD +
Sbjct: 283 IYPGKDFYCVDAMVTNFHLPESTLLMLVSAFTSREIMLAAYAEAIEERYRFFSYGDAMFI 342
>gi|238897332|ref|YP_002923009.1| S-adenosylmethionine:tRNA (m6t6A37) ribosyltransferase-isomerase
[Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum)]
gi|259551456|sp|C4K8M4|QUEA_HAMD5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|229465087|gb|ACQ66861.1| S-adenosylmethionine:tRNA (m6t6A37) ribosyltransferase-isomerase
[Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum)]
Length = 357
Score = 428 bits (1102), Expect = e-118, Method: Composition-based stats.
Identities = 140/358 (39%), Positives = 209/358 (58%), Gaps = 17/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP S +A P+ R RL+ ++ +++ + +DL L D +V
Sbjct: 1 MRLSDFSFELPESLVAQYPLEKRSDCRLLCLNGETGT---MTEGVFTDLLYQLEQGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A++ G + ++ + +SPN V+ + SK K G
Sbjct: 58 LNNTRVIPARVFGRKPS-----GGKLEILVERILSPNRVLVHLKSSKTPKLGAQFLLGD- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + T++ + + L F + L + +G IPLPPYI R + +D+ Y
Sbjct: 112 --TANIPVTLMARHAS-LFELRFDVREDALM-LLQSIGHIPLPPYI--PRADEPKDHELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF + LL+ L + GI+ FVTLHVGAGTF PVK ++ +H+M
Sbjct: 166 QTVYGQHLGAVAAPTAGLHFDNPLLNALKARGIETAFVTLHVGAGTFQPVKTDNITEHVM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+V+VGTTS+R LETA T++ + P+SG T+IFI
Sbjct: 226 HSEYAEVSQEVVDAVLACKARGKRVVAVGTTSVRSLETAAQKTKNSFLTPFSGETSIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+++ VD L++NFHLPKSTL+MLV AF G + T + Y+ AI YRF+SYGD +
Sbjct: 286 PGYQYQIVDALITNFHLPKSTLIMLVCAFAGYQNTLRAYKKAIDEKYRFFSYGDAMFI 343
>gi|84515554|ref|ZP_01002916.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Loktanella
vestfoldensis SKA53]
gi|84510837|gb|EAQ07292.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Loktanella
vestfoldensis SKA53]
Length = 351
Score = 428 bits (1102), Expect = e-118, Method: Composition-based stats.
Identities = 167/362 (46%), Positives = 231/362 (63%), Gaps = 14/362 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP + IA RP PR SARL++ + I+D +V+DL L D +V
Sbjct: 1 MKLSDFDFDLPEALIATRPARPRSSARLLLAQGDR-----IADQIVTDLVDILQPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHI--NRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+LNG R I TL + SWS +P K ++ G+++ F
Sbjct: 56 LNDTKVIPARLNGTRARSGEAGDTSARIEVTLLEPRADGSWSALVKPLKKLRDGEVVVFS 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ L AT+ + + G+ L F+++G + + ++ VG +PLPPYIA KR DA D
Sbjct: 116 AD-----LSATMTGRGD-GQAYLQFNLTGDDFDAALNAVGAMPLPPYIAAKRAADAADMD 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +AK G+VAAPTA LHF LL L + G+ + +VTLHVGAGTF+PVKV+D +H
Sbjct: 170 DYQTYWAKHAGAVAAPTASLHFDGPLLQALAARGVTMSYVTLHVGAGTFLPVKVDDVSEH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A A +N+ K+ G R++ VGTT+LRL+E+A + G + PW+G T+IFIT
Sbjct: 230 KMHAEWGEVTATAAAQINATKAAGKRVIPVGTTALRLIESAA-KGGQLQPWTGPTDIFIT 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ F+ D LM+NFHLPKSTL+MLVSA G++ K +Y HAI+ YRF+SYGD SLL
Sbjct: 289 PGFTFQIADGLMTNFHLPKSTLMMLVSALMGMDRIKAIYAHAIAERYRFFSYGDASLLLP 348
Query: 359 KR 360
R
Sbjct: 349 DR 350
>gi|269123395|ref|YP_003305972.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Streptobacillus moniliformis DSM 12112]
gi|268314721|gb|ACZ01095.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Streptobacillus moniliformis DSM 12112]
Length = 342
Score = 428 bits (1102), Expect = e-118, Method: Composition-based stats.
Identities = 142/356 (39%), Positives = 203/356 (57%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V+++DF+LP IA + PRD ++L+V++ N I D ++ +L ND +V
Sbjct: 1 MRVEDYDFELPLEFIAQHAIEPRDHSKLLVLNKNNGA---IEDKKFYNIIDYLTPNDILV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKVI A+L G + + + C L R+ W V +P+K +K D L F
Sbjct: 58 INRTKVIPARLFGKKENGVI-----LECFLLKRIDLKKWEVLLKPAKKLKINDKLIF--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+L A +++ G ++ F G+ E + + +PLPPYI K Y
Sbjct: 110 --SEKLSAKLLEIKEDGNRIMEFEFEGVF-EEILDELAEMPLPPYITEKLEN----KNRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK SVAAPTAGLHFT+ LL ++ GI + V L VG GTF PV+VE+ +DHIM
Sbjct: 163 QTVYAKSGESVAAPTAGLHFTTELLEKIEKKGITIVEVYLTVGLGTFRPVQVENVEDHIM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA+ +N K G RI++VGTTS+R LE++ ++ + T+IFI
Sbjct: 223 HSEEYIVPEKTAEIINQGKKDGKRIIAVGTTSIRTLESSLDDNNNLIAQKSETSIFIHGE 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ VD L++NFHLPKSTL+MLVS+F E YQHAI + YRF+S+GD +
Sbjct: 283 YKFKIVDALITNFHLPKSTLIMLVSSFANKEYVMNAYQHAIKNNYRFFSFGDAMFI 338
>gi|325919632|ref|ZP_08181641.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
gardneri ATCC 19865]
gi|325549880|gb|EGD20725.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
gardneri ATCC 19865]
Length = 356
Score = 428 bits (1102), Expect = e-118, Method: Composition-based stats.
Identities = 146/365 (40%), Positives = 208/365 (56%), Gaps = 22/365 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R ++RL+VV P P + D V DLP L D ++
Sbjct: 1 MKKSDFHYDLPDELIAQAPLAERAASRLLVVPP---SPQALVDRQVRDLPELLQPGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + V SK K G ++
Sbjct: 58 FNDTRVIPARLFGQKAS-----GGRVEILIERLLGEREARVQIGASKSPKAGSLIAL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ +A V+ + GE L+ LE+ + G +PLPPYI R+ ++ D Y
Sbjct: 110 --DAGGQAEVLGR--DGEFYLLRFDIPTTLEQWLPEAGQLPLPPYIRREPGVE--DRERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF LL++L G++ VTLHVGAGTF PV+V+ D H+M
Sbjct: 164 QTVFAREVGAVAAPTAGLHFDEALLAQLRERGVEFGHVTLHVGAGTFQPVRVDALDQHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-----TTEDGIINPWSGFTNI 295
H E + A + + ++RGGR+++VGTT +R LE+A DG + P++G T I
Sbjct: 224 HKEWLNVGAALVEQVRRTRARGGRVIAVGTTVVRSLESAWRKTDAAPDGELLPFAGETQI 283
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGYR R+VD +++NFHLP+STLLM+VSAF G E YQHAI+ YRF+SYGD L
Sbjct: 284 FILPGYRIRSVDAMVTNFHLPESTLLMMVSAFAGRERIFAAYQHAIAQRYRFFSYGDAML 343
Query: 356 LFQKR 360
L+ +
Sbjct: 344 LWGRE 348
>gi|284928957|ref|YP_003421479.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[cyanobacterium UCYN-A]
gi|284809416|gb|ADB95121.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[cyanobacterium UCYN-A]
Length = 361
Score = 428 bits (1102), Expect = e-118, Method: Composition-based stats.
Identities = 138/366 (37%), Positives = 202/366 (55%), Gaps = 24/366 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +++ LP IA P+ PRDS+RL+V++ +LP +L D +VFN
Sbjct: 7 LSSYNYYLPSDLIAQSPLVPRDSSRLLVIN----SLDTHIHSFFHELPKWLLPGDLLVFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ-- 120
NT+VI A+L G + ++ L P SW +P K K G + F +
Sbjct: 63 NTQVIPARLYGQKT-----TGAKVEVLLLEEKEPFSWLALVKPGKRFKIGSEILFKEKLD 117
Query: 121 --DGQSRLEATVIDKWNT-GEILLVFSISG-IELERQISLVGTIPLPPYIARKRPIDARD 176
+ ++ATV+D+ G +L F +S + +G +PLPPYI+ ++
Sbjct: 118 DLNQDFLIKATVVDQDEETGGRILKFDVSSRKIFWEALERIGHLPLPPYISNCNAHSSQ- 176
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YA+ G+VAAPTAGLHFT LL +L GI+ ++TLHVG GTF PV +D
Sbjct: 177 ---YQTIYAQKPGAVAAPTAGLHFTQELLQKLQKKGIEQAYITLHVGLGTFRPVSTDDIK 233
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-----INPWSG 291
H MH E + + T Q ++ K GGR+++VGTT +R LE E + + +SG
Sbjct: 234 QHTMHQEWVEVPSETIQKIHKTKINGGRVIAVGTTVVRALEGMANETSMDTEYGVKSFSG 293
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T+IFI PGY +R +D +++NFHLPKS+LLMLVSA G + ++Y+ AI YRFYS+G
Sbjct: 294 KTDIFIYPGYSWRLIDGMITNFHLPKSSLLMLVSALIGRKRLLELYKIAIEQKYRFYSFG 353
Query: 352 DTSLLF 357
D L+
Sbjct: 354 DGMLVL 359
>gi|292491982|ref|YP_003527421.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Nitrosococcus halophilus Nc4]
gi|291580577|gb|ADE15034.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Nitrosococcus halophilus Nc4]
Length = 350
Score = 428 bits (1102), Expect = e-118, Method: Composition-based stats.
Identities = 139/357 (38%), Positives = 200/357 (56%), Gaps = 18/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F +DLP IA P R +RL+ + + D ++LPA L+ D +V
Sbjct: 7 MQLSDFSYDLPERLIAQYPPERRGESRLLFLDGASGA---LRDQRFAELPALLSEGDLLV 63
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L GV+ ++ + + + + R SK + G L
Sbjct: 64 FNDTQVIPARLLGVKDS-----GGKVEVLIERILDQHRALAHVRASKPPRSGRRLVL--- 115
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ +E V ++ + + + L + + VG +PLPPYI R+ D Y
Sbjct: 116 --EQSVEVEVGERVAD--LFELRFLDPRPLLQLLEAVGRMPLPPYIRRE--TTPIDRERY 169
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA G+VAAPTAGLHF LL +L + G+++ +VTLHVGAGTF PV+VE+ +H M
Sbjct: 170 QTVYASRPGAVAAPTAGLHFNGPLLEQLQAQGVELGYVTLHVGAGTFQPVRVENIAEHRM 229
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + + + GGR+V+VGTT++R LETA G I P+ G T IFI PG
Sbjct: 230 HAEYVEVPEQVCAQVRETQRLGGRVVAVGTTTVRALETAAA-GGAIAPYQGETEIFIFPG 288
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YRFRAVD L++NFHLP++TLLMLV AF G + Y+HA+ YRF+SYGD L+
Sbjct: 289 YRFRAVDALITNFHLPETTLLMLVCAFAGRDRVLAAYRHAVKEGYRFFSYGDAMLVT 345
>gi|319941721|ref|ZP_08016043.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Sutterella
wadsworthensis 3_1_45B]
gi|319804654|gb|EFW01521.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Sutterella
wadsworthensis 3_1_45B]
Length = 349
Score = 428 bits (1102), Expect = e-118, Method: Composition-based stats.
Identities = 142/359 (39%), Positives = 199/359 (55%), Gaps = 16/359 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDF+LPP IA P+ R ++RL+ + VI D D+ FL D ++
Sbjct: 5 HLSDFDFELPPELIAQYPLADRAASRLLHI-----TEEVIEDCTFRDIEKFLRPGDLLIA 59
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNT+VI A+L G + + + + R SK K G L F +
Sbjct: 60 NNTRVIKARLLGAKA-----TGGAVEALIERVTGEFTAIAMVRASKSPKPGSKLFFAAS- 113
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ L+A V GE + + + + G +PLPPYI + D YQ
Sbjct: 114 -GTDLKAEVEVTGRAGEFFELKFAE--PVLQVLEAFGRVPLPPYIEH--APEKADESRYQ 168
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YA+ G+VAAPTAGLHFT +LL+RL + G+ + +VTLHVGAGTF PV+VE+ +H MH
Sbjct: 169 TVYARHPGAVAAPTAGLHFTDDLLNRLKAKGVDIEYVTLHVGAGTFQPVRVENLSEHHMH 228
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
SE + A +N K++G R+++VGTTSLR LE+A G + + T +FI PGY
Sbjct: 229 SEWFSMPEDVAARINEAKAQGRRVIAVGTTSLRTLESAADRIGHVEAGARDTRLFIMPGY 288
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
+FR VD L++NFHLPKSTL+MLVSA G E + Y HA+ YRF+SYGD + + R
Sbjct: 289 KFRIVDALVTNFHLPKSTLVMLVSALVGRERILEAYAHAVREHYRFFSYGDACFIEKAR 347
>gi|154250386|ref|YP_001411211.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fervidobacterium nodosum Rt17-B1]
gi|154154322|gb|ABS61554.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Fervidobacterium nodosum Rt17-B1]
Length = 349
Score = 428 bits (1102), Expect = e-118, Method: Composition-based stats.
Identities = 139/356 (39%), Positives = 200/356 (56%), Gaps = 18/356 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D+ LP IA PV PRDS+RLMV++ I + D+ +++ D +VF
Sbjct: 12 NLEMYDYYLPEELIAQSPVEPRDSSRLMVLNKATG---EIQHRIFRDIGEYIHEGDLLVF 68
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N TKVI A+L G + N I L ++ W +P K +K+G + F ++
Sbjct: 69 NTTKVIPARLFGKKTTGAN-----IEILLLEKLGLGIWKCLVKPGKAVKEGTEIIF--EN 121
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
++ + + G ++ FS + +I G +PLP YI YQ
Sbjct: 122 TNMKMYGKCLSRAEEGTRVIEFSEKE---DEKIFSFGNVPLPHYIKNHNVK----IERYQ 174
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YAK +GSVAAPTAGLHFT+ LL+ L + G+K V LHVG GTF PVKV D H MH
Sbjct: 175 TVYAKHEGSVAAPTAGLHFTTELLNELKNKGVKTAEVVLHVGIGTFKPVKVGDIRQHKMH 234
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E + T A+N VK+ G R+++VGTT++R LET + +SG T+IFI P +
Sbjct: 235 EEYYIVSGETISAINEVKASGKRVIAVGTTTVRTLETIARLQKS-DSYSGKTDIFIYPPF 293
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+ VD L++NFHLPKS+L+MLVSAF G + T + Y+ A+ YRF+S+GD +F
Sbjct: 294 EFKIVDALITNFHLPKSSLIMLVSAFAGYDLTMRAYRIAVQERYRFFSFGDAMFIF 349
>gi|52842221|ref|YP_096020.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
gi|52629332|gb|AAU28073.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
Length = 349
Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats.
Identities = 141/357 (39%), Positives = 204/357 (57%), Gaps = 20/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F FDLP IA P+ R +RL++ + + ++ FL D +V
Sbjct: 13 MNKQDFYFDLPSELIAQYPLANRSDSRLLIYNRQT---EEYGHYQFREIADFLQPGDLLV 69
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N++KVI A+L G + ++ + ++ + + SK +K D+++
Sbjct: 70 MNDSKVIPARLYGHKA-----TGGKVELLVERITGDFTFLAHIKASKSLKSNDLIYL--- 121
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D RLE V+ + + L + + ++ +G IPLPPYIAR+ ++ D Y
Sbjct: 122 DAGKRLE--VLQRQDD----LFLCKACENILDLLNDLGHIPLPPYIARE--DESLDKERY 173
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GSVAAPTAGLHF +LS + + G+ + +VTLHVGAGTF PV+ E DH M
Sbjct: 174 QTVYAKCAGSVAAPTAGLHFDDAVLSSIRARGVNIAYVTLHVGAGTFRPVRCERIQDHKM 233
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + KS G R+++VGTT+LR LE+A G + P S T+IFI PG
Sbjct: 234 HSEWFTVSPDLCTAVKAAKSMGNRVIAVGTTALRSLESAA-MGGELIPCSRDTDIFIYPG 292
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ D L++NFHLP+STL+MLVSAF G +E +YQ AI YRF+SYGD SLL
Sbjct: 293 YQFKVCDGLITNFHLPESTLVMLVSAFIGHQECMALYQEAIDKRYRFFSYGDASLLL 349
>gi|326387409|ref|ZP_08209018.1| queuosine biosynthesis protein [Novosphingobium nitrogenifigens DSM
19370]
gi|326208065|gb|EGD58873.1| queuosine biosynthesis protein [Novosphingobium nitrogenifigens DSM
19370]
Length = 342
Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats.
Identities = 182/357 (50%), Positives = 219/357 (61%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLPP RIALRP PRDSARL+ V + D V DLP L D +V
Sbjct: 1 MRVDLFDFDLPPERIALRPARPRDSARLLHVPGK----GALGDLHVRDLPGLLRKGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI AQL G+R + I TLH R W + R K + GD + F
Sbjct: 57 FNDTRVIPAQLEGMR------GQARIGATLHKREDLRRWQAFVRNGKRLSPGDTIDFGEG 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A + G L F +E + G +PLPPYIA KRP DA D DY
Sbjct: 111 -----VMALAEVRHPDGSWTLAFQGD-EPVEILLERAGRMPLPPYIASKRPTDAADRQDY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A G+VAAPTA LHFT LL L GI +TLHVGAGTF+PVK EDT DH M
Sbjct: 165 QTMFAARDGAVAAPTAALHFTPGLLEALADAGIGHETLTLHVGAGTFLPVKAEDTSDHAM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E G I+ TA LN+V++ GGR+++VGTTSLRLLE+A ED +I P++G T+IFITPG
Sbjct: 225 HPEWGRIEQETADRLNAVRAGGGRVIAVGTTSLRLLESAAGEDRVIRPFAGDTSIFITPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y FRA+D LM+NFHLPKSTL MLVSA G++ ++ Y HAI YRFYSYGD SLL
Sbjct: 285 YTFRAIDGLMTNFHLPKSTLFMLVSALMGLDRMQEAYAHAIREGYRFYSYGDASLLL 341
>gi|194365392|ref|YP_002028002.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Stenotrophomonas maltophilia R551-3]
gi|226713851|sp|B4SSS0|QUEA_STRM5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|194348196|gb|ACF51319.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Stenotrophomonas maltophilia R551-3]
Length = 343
Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats.
Identities = 146/359 (40%), Positives = 206/359 (57%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F+++LP IA P+ R ++RL++V P P +D V DLP+ L D +V
Sbjct: 1 MKKSDFNYNLPAELIAQAPLAERSASRLLLVPP---APDAFTDLQVRDLPSLLQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + SK K G +
Sbjct: 58 FNDTRVIPARLFGQKAS-----GGRVEILIERLLGGQQARAQVGASKSPKAGSRIAL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ EA V+ + GE ++ LE+ + G +PLPPYI R+ +D D Y
Sbjct: 110 --DAGGEAEVLGR--DGEFYVLQFHVPESLEQWLLHAGRLPLPPYIQREPGMD--DRERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF LL+ L G+ VTLHVGAGTF PV+ +D DH+M
Sbjct: 164 QTVFAREVGAVAAPTAGLHFDEPLLAALKDKGVDFGHVTLHVGAGTFQPVRADDLKDHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A Q + ++ GGR++ VGTT +R LE+A DG + P++G T IFITPG
Sbjct: 224 HREWLNVGAELVQQVRRTRAAGGRVIGVGTTVVRALESAMR-DGELLPFAGETQIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YR R+VD +++NFHLP+STLLM++SAF G E + YQHAI+ YRF+SYGD LLF +
Sbjct: 283 YRIRSVDAMVTNFHLPESTLLMMISAFAGKERVFEAYQHAIAQRYRFFSYGDAMLLFPQ 341
>gi|311748337|ref|ZP_07722122.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Algoriphagus sp. PR1]
gi|126576845|gb|EAZ81093.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Algoriphagus sp. PR1]
Length = 349
Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats.
Identities = 140/362 (38%), Positives = 196/362 (54%), Gaps = 18/362 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F++P ++L P RD +RLMV+H + I + D+ + D V
Sbjct: 1 MKLSDFKFEVPKKLVSLYPAENRDESRLMVLHRDTGK---IEHRVFKDITEYFGEGDVFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
N+TKV A+L G + + EI L ++P W V P++ I+ G+ L+F
Sbjct: 58 TNDTKVFPARLYGNK----EKTGAEIEVFLLRELNPELRLWDVLVDPARKIRVGNKLYF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPL-PPYIARKRPIDAR 175
G S L A VID + + F G E + I +G PL +I RK ++
Sbjct: 113 ---GDSDLVAEVIDNTTSRGRTIRFLFDGTEEEFHKTIDTLGETPLLKEFIERK--VETE 167
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT +AK G+VAAPTAGLHFT +LL RL G++V +TLHVG GTF V VED
Sbjct: 168 DRERYQTVFAKNVGAVAAPTAGLHFTPHLLKRLELQGVEVSPITLHVGLGTFRQVDVEDL 227
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
H M SE I T +N R+V+VGTTSL+ +E++ T +G + G+T+
Sbjct: 228 TKHKMDSENYNIPEGTVSLVNKALDEKKRVVAVGTTSLKTVESSVTANGRLKASQGWTDK 287
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI P Y F+ + L++NFHLP+STLLM SAF G + K Y+ AI YRF+SYGD L
Sbjct: 288 FIIPPYEFKIANALITNFHLPESTLLMTASAFGGYDLVMKAYKEAIKEKYRFFSYGDAML 347
Query: 356 LF 357
+
Sbjct: 348 IL 349
>gi|17547431|ref|NP_520833.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ralstonia
solanacearum GMI1000]
gi|17429734|emb|CAD16419.1| probable s-adenosylmethionine:trna ribosyltransferase-isomerase
(queuosine biosynthesis protein quea) [Ralstonia
solanacearum GMI1000]
Length = 362
Score = 428 bits (1100), Expect = e-118, Method: Composition-based stats.
Identities = 148/360 (41%), Positives = 202/360 (56%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FDFDLPP IA + R ++RL+ + D +DL +L D +V
Sbjct: 8 LTLSDFDFDLPPELIAQTALPDRTASRLLAARHDAQG-THFDDRQFADLVDYLRPGDLLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+ G + +I + + ++ R SK G L
Sbjct: 67 FNDTRVIKARFFGHKAS-----GGKIEVLVERLLDEHTVLAQIRSSKSPVAGSTLRLADA 121
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ TV + L + I G +PLPPYI D+ D Y
Sbjct: 122 -----FDVTVGPRHEPFFTLRFPQPA----LELIEQYGRLPLPPYIEH--TPDSFDETRY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF L +RL ++G++ F+TLHVGAGTF PV+VE+ +H M
Sbjct: 171 QTVYARTPGAVAAPTAGLHFDDALFARLDAMGVRRGFLTLHVGAGTFSPVRVENIAEHRM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I A+A+ + ++ GGRIV+VGTTS+R LE+A DG + SG T+IFITPG
Sbjct: 231 HSEWYAISPDLAEAIRATRAVGGRIVAVGTTSMRALESAAQPDGTLAAGSGETDIFITPG 290
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI+ YRF+SYGD L +
Sbjct: 291 YRFRLVDALVTNFHLPKSTLLMLVSAFAGLETIRAAYRHAIAQRYRFFSYGDAMFLTRAE 350
>gi|312116034|ref|YP_004013630.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Rhodomicrobium vannielii ATCC 17100]
gi|311221163|gb|ADP72531.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Rhodomicrobium vannielii ATCC 17100]
Length = 391
Score = 428 bits (1100), Expect = e-118, Method: Composition-based stats.
Identities = 181/358 (50%), Positives = 240/358 (67%), Gaps = 6/358 (1%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDF+LP S IALRP PRD+ARL+ V P + P +S+ + DLPAF D +VF
Sbjct: 29 HLTDFDFELPKSAIALRPASPRDAARLLRVDP--AAPQPLSEATIRDLPAFFRPGDIMVF 86
Query: 62 NNTKVITAQLNGVRFCHINRREK-EISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V++A+L+G R ++S L R + SW +ARP++ ++ GD +HF +
Sbjct: 87 NDTRVLSAELSGTRPPRDADAPAVDVSLNLIEREASGSWKAFARPARRLRPGDAIHFETG 146
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
SRL V+ K + GEI L G +E + G +PLPPYIAR+RP D RD DY
Sbjct: 147 GHASRL--IVVAKSDEGEITLAAP-DGDSVEAIMQRHGAMPLPPYIARQRPADERDRSDY 203
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +G+VAAPTAGLHFT LL+RL GI+ FVTLHVGAGTF+PVK E +DH +
Sbjct: 204 QTVFARNEGAVAAPTAGLHFTPELLARLAERGIETAFVTLHVGAGTFLPVKSETVEDHEI 263
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E I TA+A+N+ + RGGRI++ GTTSLR+LETAT EDG I P GFT IFI PG
Sbjct: 264 HAEWFEIGDATARAINAARERGGRIIAAGTTSLRVLETATREDGFIEPAKGFTRIFIKPG 323
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+ FR+ D+L++NFHLPKSTL MLV AF G + K+ Y HA+ +RFYSYGD LL +
Sbjct: 324 HCFRSADLLVTNFHLPKSTLFMLVCAFSGTDLMKRAYAHAVEAGFRFYSYGDACLLAR 381
>gi|261749412|ref|YP_003257098.1| queuosine biosynthesis protein [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
gi|261497505|gb|ACX83955.1| queuosine biosynthesis protein [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
Length = 347
Score = 428 bits (1100), Expect = e-118, Method: Composition-based stats.
Identities = 142/361 (39%), Positives = 203/361 (56%), Gaps = 18/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP +A +P RD +RLM+++ + I + DL + D I+
Sbjct: 1 MRTSDFDFGLPLDLLANQPTEERDESRLMIINRKSNG---IKHEIFKDLHQYFEEGDTII 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FNNTKV A+L G + + E +I L + P +W V P++ ++ G+ L+F
Sbjct: 58 FNNTKVFPARLFGNK----EKTEAKIEVFLLRELDPIDRTWDVLVDPARKVRVGNKLNFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDARD 176
L VID + +L SG EL ++I +G PLP YI KR D D
Sbjct: 114 -----YGLTGEVIDNTTSRGRILQLHFSGTHKELIKKIKELGKTPLPKYI--KRLPDKND 166
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +GSVAAPTAGLHF+ +LL +L GI + +TLH+G G+F+PV+VED
Sbjct: 167 EERYQTIYAKEEGSVAAPTAGLHFSKHLLKKLEIKGINLVEITLHLGLGSFLPVEVEDIS 226
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE FI T +N + RI +VGT+S+R +E++ + + +NP+ G+TN F
Sbjct: 227 KHKMDSEKCFIKKETCDIVNKSIQQKKRICAVGTSSMRAIESSVSPNKYLNPFYGWTNKF 286
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH+PKSTLLM+ AF G + K Y+ A YRFYSYGD+ L+
Sbjct: 287 IFPPYNFSIANSMITNFHMPKSTLLMMTVAFTGYDLLMKAYKIATKEKYRFYSYGDSMLI 346
Query: 357 F 357
Sbjct: 347 L 347
>gi|21263869|sp|Q8XVW5|QUEA_RALSO RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
Length = 356
Score = 428 bits (1100), Expect = e-118, Method: Composition-based stats.
Identities = 148/360 (41%), Positives = 202/360 (56%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FDFDLPP IA + R ++RL+ + D +DL +L D +V
Sbjct: 2 LTLSDFDFDLPPELIAQTALPDRTASRLLAARHDAQG-THFDDRQFADLVDYLRPGDLLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+ G + +I + + ++ R SK G L
Sbjct: 61 FNDTRVIKARFFGHKAS-----GGKIEVLVERLLDEHTVLAQIRSSKSPVAGSTLRLADA 115
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ TV + L + I G +PLPPYI D+ D Y
Sbjct: 116 -----FDVTVGPRHEPFFTLRFPQPA----LELIEQYGRLPLPPYIEH--TPDSFDETRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF L +RL ++G++ F+TLHVGAGTF PV+VE+ +H M
Sbjct: 165 QTVYARTPGAVAAPTAGLHFDDALFARLDAMGVRRGFLTLHVGAGTFSPVRVENIAEHRM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I A+A+ + ++ GGRIV+VGTTS+R LE+A DG + SG T+IFITPG
Sbjct: 225 HSEWYAISPDLAEAIRATRAVGGRIVAVGTTSMRALESAAQPDGTLAAGSGETDIFITPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI+ YRF+SYGD L +
Sbjct: 285 YRFRLVDALVTNFHLPKSTLLMLVSAFAGLETIRAAYRHAIAQRYRFFSYGDAMFLTRAE 344
>gi|207721610|ref|YP_002252049.1| S-adenosylmethionine:trna ribosyltransferase-isomerase [Ralstonia
solanacearum MolK2]
gi|206586771|emb|CAQ17356.1| s-adenosylmethionine:trna ribosyltransferase-isomerase (queuosine
biosynthesis protein quea) [Ralstonia solanacearum
MolK2]
Length = 362
Score = 428 bits (1100), Expect = e-118, Method: Composition-based stats.
Identities = 147/360 (40%), Positives = 204/360 (56%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FDFDLPP IA + R ++RL+ +H + + D +DL +L D +V
Sbjct: 8 LTLSDFDFDLPPELIAQTALPDRTASRLLAMHRD-APGTHFDDRQFADLVDYLRPGDLLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+ G + I + + ++ R SK G L
Sbjct: 67 FNDTRVIKARFFGHKAS-----GGRIEVLVERLLDEHTVLAQIRSSKSPVTGSRLLLADA 121
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ TV + L + I G +PLPPYI D+ D Y
Sbjct: 122 -----FDVTVGPRQEPFFTLRFPQPA----LELIEQYGRLPLPPYIEH--TPDSFDETRY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF L +RL ++G++ F+TLHVGAGTF PV+VE+ +H M
Sbjct: 171 QTVYARTPGAVAAPTAGLHFDDALFARLDAMGVRRGFLTLHVGAGTFSPVRVENIAEHRM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I A+A+ + ++ GGR+++VGTTS+R LE+A DG + SG T+IFITPG
Sbjct: 231 HSEWYAISPELAEAIRATRAAGGRVIAVGTTSMRALESAAQPDGTLAAGSGETDIFITPG 290
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI+ YRF+SYGD L +
Sbjct: 291 YRFRLVDALVTNFHLPKSTLLMLVSAFAGLETIRAAYRHAIAQRYRFFSYGDAMFLTRAE 350
>gi|212634512|ref|YP_002311037.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Shewanella
piezotolerans WP3]
gi|226736743|sp|B8CLC4|QUEA_SHEPW RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|212555996|gb|ACJ28450.1| Queuosine biosynthesis protein [Shewanella piezotolerans WP3]
Length = 345
Score = 428 bits (1100), Expect = e-118, Method: Composition-based stats.
Identities = 134/360 (37%), Positives = 198/360 (55%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P R ++RL+ + N ++D + + + D +V
Sbjct: 1 MRVADFSFELPDELIARYPTAERTASRLLSLDGNSGA---LADLQFTAILEKVQPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + + ++ + + + R SK K +I+
Sbjct: 58 FNNTRVIPARLFGKK-----QSGGKLEILVERMLDDKRILAHVRCSKSPKVDNIICL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ E + + + + + S + + VG +PLPPYI RP + D Y
Sbjct: 110 --DNGYEMKMCARHDA--LFELELQSDKTILEVLEEVGHMPLPPYI--DRPDEDADKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + G+VAAPTAGLHF +L+ L G+K FVTLHVGAGTF PV+V++ DH M
Sbjct: 164 QTVYNQTPGAVAAPTAGLHFDDAMLAALKDKGVKTAFVTLHVGAGTFQPVRVDEILDHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLR-LLETATTEDGIINPWSGFTNIFITP 299
HSE + + K+ G R+++VGTTS+R L A + +SG T+IFI P
Sbjct: 224 HSEWAEVSQDVVDLIALTKANGHRVIAVGTTSVRSLESAARASAAELEAFSGDTDIFIYP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY+F+ VD +++NFHLP+STL+ML+SAF G +E K YQHAI+ YRF+SYGD + +K
Sbjct: 284 GYQFQVVDAMVTNFHLPESTLIMLLSAFAGFDEVKTAYQHAIAQKYRFFSYGDAMFVTKK 343
>gi|329119928|ref|ZP_08248602.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
bacilliformis ATCC BAA-1200]
gi|327464084|gb|EGF10395.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
bacilliformis ATCC BAA-1200]
Length = 474
Score = 427 bits (1099), Expect = e-117, Method: Composition-based stats.
Identities = 150/360 (41%), Positives = 210/360 (58%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M++ +FDF LP IA P R ++RL+V P+ + D + LP + + D V
Sbjct: 131 MLLSDFDFHLPEHLIAQHPPAERGASRLLVALPD----GTLRDETFAFLPQLVRAGDLFV 186
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G +L F
Sbjct: 187 FNNTKVVKARLFGQKES-----GGRIEALIERVLDAHTALAHIRASKSPKPGTVLLF--- 238
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A + ++ GE+ + + + + G +PLPPYIAR + Y
Sbjct: 239 --DGGIRAEMTER--AGELFTLRFAGEQSVWQILERHGRLPLPPYIARAAAAED--EARY 292
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL+ L + G + +TLHVGAGTF PV+ E+ +H M
Sbjct: 293 QTVYAKHQGAVAAPTAGLHFTEALLAELEARGARTAEITLHVGAGTFQPVRTENVAEHKM 352
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I A TA+A+ K+ GGR+ +VGTTS+R LE+A G ++ SG T+IF+TPG
Sbjct: 353 HSEWYDIPAETAEAVAETKALGGRVWAVGTTSVRALESAARATGCLSAGSGDTDIFLTPG 412
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
RF D L++NFHLPKSTLLMLVSAF G EE +++Y+HA+ YRF+SYGD +L +K
Sbjct: 413 CRFNVADCLITNFHLPKSTLLMLVSAFAGTEEIRRIYRHAVEREYRFFSYGDAMVLGRKE 472
>gi|238577798|gb|ACR46709.1| QueA [Pseudomonas syringae pv. tabaci]
gi|330984993|gb|EGH83096.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. lachrymans str. M301315]
gi|331009165|gb|EGH89221.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. tabaci ATCC 11528]
Length = 354
Score = 427 bits (1099), Expect = e-117, Method: Composition-based stats.
Identities = 146/358 (40%), Positives = 201/358 (56%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S+RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTLDGPTGA---LAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRSSKSPKPGSSILI--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
EA ++ + + L E+ + VG +PLPPYI RP + D Y
Sbjct: 110 --DGGGEAEMVARHDALFELRFAE----EVLPLLERVGHMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDQPLLEAIAAKGVETAFVTLHVGAGTFQPVRVEQIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + ++RGGR+++VGTTS+R LE+A DG + P+SG T+IFI PG
Sbjct: 222 HSEWLEVGQDVVDAVAACRARGGRVIAVGTTSVRSLESAAR-DGELKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFSYGDAMFITR 338
>gi|254448135|ref|ZP_05061598.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [gamma
proteobacterium HTCC5015]
gi|198262261|gb|EDY86543.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [gamma
proteobacterium HTCC5015]
Length = 349
Score = 427 bits (1099), Expect = e-117, Method: Composition-based stats.
Identities = 132/359 (36%), Positives = 202/359 (56%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F FDLP IA P+ R +RL+ + + D +++ L+ D +V
Sbjct: 1 MKTQDFHFDLPSELIAQVPLERRVDSRLLCLSGDSGPV----DRQFANVIDMLDPGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L+G + ++ + + + R S+ K G +
Sbjct: 57 LNDTRVIPARLHGNKAS-----GGKLEVLIERITDEHRALCHIRCSRSPKPGTRIVL--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ +EA ++ + G + V L + G +PLPPYI R +A D Y
Sbjct: 109 --EGVVEAEILGR--QGALFDVQFDPAKPLMDWLLEYGHMPLPPYIERS--DEASDQERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF ++++ L + G+++ VTLHVGAGTF PVKV++ +H M
Sbjct: 163 QTVFAEKAGAVAAPTAGLHFDQDMMAALEAKGVRIAKVTLHVGAGTFQPVKVDEIAEHTM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + T +A++ +SRGGR+V+VGTT +R LE+ E P+ G T+IFITPG
Sbjct: 223 HSERIDVGEETCRAISETRSRGGRVVAVGTTVVRSLESLP-EGDHPQPYCGETDIFITPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
+ FR +D+L++NFHLP STLLMLVSA G ++ Y+HA+ YRF+SYGD + +
Sbjct: 282 FSFRFIDVLITNFHLPCSTLLMLVSALGGYDKVMSAYRHAVEQRYRFFSYGDAMWVENQ 340
>gi|330969090|gb|EGH69156.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. aceris str. M302273PT]
Length = 354
Score = 427 bits (1099), Expect = e-117, Method: Composition-based stats.
Identities = 146/358 (40%), Positives = 201/358 (56%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S+RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTLDGPTGA---LAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRSSKSPKPGSSILI--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
EA ++ + + L E+ + VG +PLPPYI RP + D Y
Sbjct: 110 --DGSGEAEMVARHDALFELRFAE----EVLPLLERVGHMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDQPLLEAIAAKGVETAFVTLHVGAGTFQPVRVEQIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + ++RGGR+++VGTTS+R LE+A DG + P+SG T+IFI PG
Sbjct: 222 HSEWLEVGQDVVDAVAACRARGGRVIAVGTTSVRSLESAAR-DGELKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFSYGDAMFITR 338
>gi|82703545|ref|YP_413111.1| S-adenosylmethionine [Nitrosospira multiformis ATCC 25196]
gi|91207386|sp|Q2Y6A2|QUEA_NITMU RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|82411610|gb|ABB75719.1| S-adenosylmethionine [Nitrosospira multiformis ATCC 25196]
Length = 356
Score = 427 bits (1099), Expect = e-117, Method: Composition-based stats.
Identities = 152/371 (40%), Positives = 213/371 (57%), Gaps = 28/371 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++FDFDLPP IA P R ++R++ + + D + +DLP++L D IV
Sbjct: 1 MKIQDFDFDLPPELIAQFPAEKRGNSRMLHLDATSGA---LQDRMFADLPSYLRPGDVIV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L GVR + + + + R S K G L
Sbjct: 58 FNDTRVIKARLYGVR-----DTGGRVEVLVERVLDSHCALAAIRASHSPKPGSKLFL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+E TV+ + + IL SG + + G +PLPPYI RP++ D + Y
Sbjct: 110 --AGAIEVTVLSREHGFYILQFEHESG--VMELLERYGNLPLPPYI--SRPVEKSDELRY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA G+VAAPTAGLHF ++L L +G+ + VTLHVG+GTF PV+VE+ DH M
Sbjct: 164 QTVYAARPGAVAAPTAGLHFDEHMLGLLRKMGVVMAHVTLHVGSGTFQPVRVENIADHRM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE----------DG-IINPW 289
HSE+ ++ A T + + K+ GGR+++VGTTSLR LE A DG I
Sbjct: 224 HSEVFYVSAETVECIRHAKAEGGRVLAVGTTSLRALEAAAAFAGERAEADNGDGVRIKCG 283
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
+G T+IFITPGY+FR VD L++NFHLP+STLLMLVSAF G+E + Y+HAI YRF+S
Sbjct: 284 AGETDIFITPGYQFRVVDCLLTNFHLPRSTLLMLVSAFGGVENIRCAYRHAIKERYRFFS 343
Query: 350 YGDTSLLFQKR 360
+GD L+ +
Sbjct: 344 FGDAMLIGRAE 354
>gi|53711349|ref|YP_097341.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
fragilis YCH46]
gi|60679666|ref|YP_209810.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
fragilis NCTC 9343]
gi|253564545|ref|ZP_04842002.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 3_2_5]
gi|265764793|ref|ZP_06093068.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 2_1_16]
gi|81317260|sp|Q5LJ28|QUEA_BACFN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|81384013|sp|Q650L7|QUEA_BACFR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|52214214|dbj|BAD46807.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
fragilis YCH46]
gi|60491100|emb|CAH05848.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides fragilis NCTC 9343]
gi|251948321|gb|EES88603.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 3_2_5]
gi|263254177|gb|EEZ25611.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 2_1_16]
gi|301161131|emb|CBW20669.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides fragilis 638R]
Length = 352
Score = 427 bits (1099), Expect = e-117, Method: Composition-based stats.
Identities = 127/363 (34%), Positives = 189/363 (52%), Gaps = 15/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P RD +RLMV+H I + D+ + + D V
Sbjct: 1 MKLSQFKFKLPEEKIALHPTKYRDESRLMVLHKRTG---EIEHKMFKDILNYFDDKDVFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK----EKTGARIEVFLLRELNEELRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDARD 176
D + A VID + L F G E ++ + +G PLP I RP++ D
Sbjct: 114 DDD---SMVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYALGETPLPHTIL-NRPVEEED 169
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+Q+ +AK +G+V APTA LHF+ L+ R+ GI ++TLH G G F + VED
Sbjct: 170 AERFQSIFAKNEGAVTAPTASLHFSRELMKRMEIKGIDFAYITLHAGLGNFRDIDVEDLT 229
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE F+ + +N K G + +VGTT +R +E+ + DG + + G+TN F
Sbjct: 230 KHKMDSEQMFVTEEAVKIVNRAKDLGKNVCAVGTTVMRAIESTVSTDGHLKEYEGWTNKF 289
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + ++SNFH+P STLLM+V+AF G ++ Y A+ YRF +YGD L+
Sbjct: 290 IFPPYDFTVANAMVSNFHMPLSTLLMIVAAFGGYDQVMDAYHIALKEGYRFGTYGDAMLI 349
Query: 357 FQK 359
K
Sbjct: 350 LDK 352
>gi|255994149|ref|ZP_05427284.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Eubacterium
saphenum ATCC 49989]
gi|255993817|gb|EEU03906.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Eubacterium
saphenum ATCC 49989]
Length = 365
Score = 427 bits (1099), Expect = e-117, Method: Composition-based stats.
Identities = 150/367 (40%), Positives = 202/367 (55%), Gaps = 18/367 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+F++DLPP +IA PV RD ++LMVV IS D+ +LN D +V
Sbjct: 6 KTDDFNYDLPPQKIASYPVSKRDESKLMVVKRRSFESPEISHAKFLDIIDYLNEGDCLVI 65
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N TKVI A+ G + I L + N + +P+K + +G I+ +D
Sbjct: 66 NQTKVIKARFIGFK-----DTGARIEVLLLKPLGENLFEAMIKPAKRVSEGTIISVLPKD 120
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
++ + + +I+ I + I G IPLPPYI +R + D YQ
Sbjct: 121 DETGEPLKIQVVKSDDDIIKQVRILNADSLDYIEEFGKIPLPPYI--EREAELSDEKRYQ 178
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T Y+KI+GSVAAPTAGLHFT L+S++ + GIKV + LHVG GTF PV +D DHIMH
Sbjct: 179 TVYSKIKGSVAAPTAGLHFTEELISKIQNKGIKVARILLHVGVGTFRPVNCDDISDHIMH 238
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-------TTEDGI----INPWS 290
SE I A +NS K+ GGR++ VGTTS+R LE A + G + S
Sbjct: 239 SEYFEIPEEAADIINSTKNSGGRVICVGTTSVRTLEGAKCIQNASSDASGHKTSDLKVCS 298
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G TNIFI PGY F+ D +++NFHLPKSTLLMLVSAF G++ T Y A+ YRF+SY
Sbjct: 299 GETNIFIYPGYEFKLTDGIITNFHLPKSTLLMLVSAFLGLDNTLNAYDIALKSDYRFFSY 358
Query: 351 GDTSLLF 357
GD L+
Sbjct: 359 GDAMLII 365
>gi|289626174|ref|ZP_06459128.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. aesculi str. NCPPB3681]
gi|289649081|ref|ZP_06480424.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. aesculi str. 2250]
gi|298486003|ref|ZP_07004077.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
gi|298159480|gb|EFI00527.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
gi|330869599|gb|EGH04308.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. aesculi str. 0893_23]
gi|330950810|gb|EGH51070.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae Cit 7]
Length = 354
Score = 427 bits (1099), Expect = e-117, Method: Composition-based stats.
Identities = 147/358 (41%), Positives = 201/358 (56%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S+RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTLDGPTGA---LAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRSSKSPKPGSSILI--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
EA ++ + + L E+ + VG +PLPPYI RP + D Y
Sbjct: 110 --DGGGEAEMVARHDALFELRFAE----EVLPLLERVGHMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDQPLLEAIAAKGVETAFVTLHVGAGTFQPVRVEQIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + ++RGGR+V+VGTTS+R LE+A DG + P+SG T+IFI PG
Sbjct: 222 HSEWLEVGQDVVDAVAACRARGGRVVAVGTTSVRSLESAAR-DGELKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFSYGDAMFITR 338
>gi|114771126|ref|ZP_01448566.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [alpha
proteobacterium HTCC2255]
gi|114548408|gb|EAU51294.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [alpha
proteobacterium HTCC2255]
Length = 348
Score = 427 bits (1098), Expect = e-117, Method: Composition-based stats.
Identities = 172/360 (47%), Positives = 230/360 (63%), Gaps = 14/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF+LP IALRPV PR S++L+V S I D +L +L D +V
Sbjct: 1 MKLSDFDFELPNELIALRPVHPRSSSKLLV-----SKDDKIIDDQFLNLLKYLKKGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHI--NRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+L+G R H R I L + W A+P+K + G+I++F
Sbjct: 56 LNDTKVIPAKLHGKRIRHSDNGRTTANIGINLLSTNNDGHWLALAKPAKRVNVGEIINF- 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ L A V+DK + G ++L F++S ++++ +GT+PLPPYIA +R D D
Sbjct: 115 ----DNELTAKVLDKSSNG-LVLQFNLSEEIFDQKLKEIGTMPLPPYIASQRLPDKFDDN 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ GSVAAPTA LHF LL +L GIK VTLHVGAGTF+PVKV++ DH
Sbjct: 170 DYQTVFAEKSGSVAAPTASLHFDDVLLKQLNDFGIKTSKVTLHVGAGTFLPVKVDNIADH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE G ++ A + KS GGRI+ VGTT+LRL+ETA + G IN W+G T+IFIT
Sbjct: 230 KMHSEWGEVNNIAASEIAKTKSEGGRIIPVGTTALRLIETAA-KSGKINSWTGDTDIFIT 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG++F+ D L++NFHLPKSTLLMLVSA G E+ K +Y HAI++ YRF+SYGD SLL
Sbjct: 289 PGFKFKIADGLITNFHLPKSTLLMLVSALIGTEKLKNVYLHAINNRYRFFSYGDASLLLP 348
>gi|29348623|ref|NP_812126.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
thetaiotaomicron VPI-5482]
gi|253569034|ref|ZP_04846444.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 1_1_6]
gi|298386991|ref|ZP_06996545.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 1_1_14]
gi|29340528|gb|AAO78320.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
thetaiotaomicron VPI-5482]
gi|251841053|gb|EES69134.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 1_1_6]
gi|298260141|gb|EFI03011.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 1_1_14]
Length = 352
Score = 427 bits (1098), Expect = e-117, Method: Composition-based stats.
Identities = 129/363 (35%), Positives = 192/363 (52%), Gaps = 15/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P RD +RLMV+H I + D+ + + D +
Sbjct: 1 MKLSQFKFKLPEDKIALHPTKYRDESRLMVLHRRTG---EIEHKMFKDVLNYFDDKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK----EKTGARIEVFLLRELNEELRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDARD 176
+ D + A VID + L F G E ++ + +G PLP I RP++ D
Sbjct: 114 ADD---SMVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYALGETPLPHSII-NRPVEPED 169
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+Q+ +AK +G+V APTA LHF+ L+ RL GI ++TLH G G F + VED
Sbjct: 170 SERFQSIFAKNEGAVTAPTASLHFSRELMKRLEIKGIDFAYITLHAGLGNFRDIDVEDLT 229
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE ++A +N K +G + +VGTT +R +E+A + DG + + G+TN F
Sbjct: 230 KHKMDSEQMIVNAEAVNTVNRAKDKGKNVCAVGTTVMRAIESAVSTDGHLKEFEGWTNKF 289
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + ++SNFH+P STLLM+V+AF G E+ Y A+ YRF +YGD L+
Sbjct: 290 IFPPYEFTVANSMISNFHMPLSTLLMIVAAFGGYEQVMDAYHVALKEGYRFGTYGDAMLI 349
Query: 357 FQK 359
K
Sbjct: 350 LDK 352
>gi|188991189|ref|YP_001903199.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
campestris pv. campestris str. B100]
gi|229619925|sp|B0RRR0|QUEA_XANCB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|167732949|emb|CAP51145.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase [Xanthomonas
campestris pv. campestris]
Length = 356
Score = 427 bits (1098), Expect = e-117, Method: Composition-based stats.
Identities = 145/365 (39%), Positives = 206/365 (56%), Gaps = 22/365 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R ++RL+VV P P SD V DLP L D ++
Sbjct: 1 MKKSDFHYDLPEELIAQAPLAERAASRLLVVPP---TPAAFSDRQVRDLPELLQPGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + SK K G ++
Sbjct: 58 FNDTRVIPARLFGQKAS-----GGRVEILIERLLGGQQARAQIGASKSPKAGSVIAL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ +A V+ + GE L+ LE + G +PLPPYI R+ +D D Y
Sbjct: 110 --DAGGQAEVLGR--DGEFYLLRFDIPAPLEHWLLDAGRLPLPPYIRREPGLD--DRERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF LL+RL G++ VTLHVGAGTF PV+V+ D H+M
Sbjct: 164 QTVFAREVGAVAAPTAGLHFDEALLARLRERGVEFGHVTLHVGAGTFQPVRVDALDKHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-----DGIINPWSGFTNI 295
H+E + A + + ++RGGR+++VGTT +R LE+A + G + P++G T I
Sbjct: 224 HTEWLNVGAALVEQVRRTRARGGRVIAVGTTVVRSLESAWRKTDDAPHGELQPFAGETQI 283
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGYR R+VD +++NFHLP+STLLM+VSAF G + Y HAI+ YRF+SYGD L
Sbjct: 284 FILPGYRIRSVDAMVTNFHLPESTLLMMVSAFAGCDRIFAAYAHAIAQRYRFFSYGDAML 343
Query: 356 LFQKR 360
L+ +
Sbjct: 344 LWSRE 348
>gi|39935671|ref|NP_947947.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodopseudomonas palustris CGA009]
gi|39649524|emb|CAE28046.1| S-adenosylmethionine tRNA ribosyltransferase [Rhodopseudomonas
palustris CGA009]
Length = 364
Score = 427 bits (1098), Expect = e-117, Method: Composition-based stats.
Identities = 194/362 (53%), Positives = 249/362 (68%), Gaps = 11/362 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDFDLP IALRPV PRD+AR++VV P + D +V DLPA L D +V
Sbjct: 5 MRTELFDFDLPAENIALRPVSPRDAARMLVVRPG----APLEDRIVRDLPALLAPGDQLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI AQL G R E +I TL R+ W +P+K + GD++ F
Sbjct: 61 VNDTRVIAAQLTGRRIGRG--LEPKIEATLIKRLDGARWQALVKPAKKLLPGDVVRF-GH 117
Query: 121 DGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
DG+ L+ATV K + GE+ LVFS G L++ I+ VG PLPPYIA KR DA+D
Sbjct: 118 DGRVCLLGHLDATVEAKGDAGEVTLVFSFHGPVLDQAIAEVGATPLPPYIASKRAPDAQD 177
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT +A +G+VAAPTAGLHFT+ L + L + G+ ++ +TLHVGAGTF+PVK EDT
Sbjct: 178 IADYQTMFASNEGAVAAPTAGLHFTAELETALAACGVGLHRITLHVGAGTFLPVKAEDTS 237
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+H MH+E G I + TA+ALN+ ++ GGRIV+VGTTSLRLLE+A +DG I P++ T+IF
Sbjct: 238 EHRMHAEWGTISSGTAEALNAARAAGGRIVAVGTTSLRLLESAARDDGRIAPFADETSIF 297
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFRAVD+LM+NFHLP+STL MLVSAFCG++ + Y HAI YRFYSYGD SLL
Sbjct: 298 ITPGYRFRAVDVLMTNFHLPRSTLFMLVSAFCGLDTMQAAYAHAIRTGYRFYSYGDASLL 357
Query: 357 FQ 358
F+
Sbjct: 358 FR 359
>gi|148263777|ref|YP_001230483.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Geobacter
uraniireducens Rf4]
gi|189038524|sp|A5GEQ5|QUEA_GEOUR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|146397277|gb|ABQ25910.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Geobacter
uraniireducens Rf4]
Length = 343
Score = 427 bits (1098), Expect = e-117, Method: Composition-based stats.
Identities = 139/359 (38%), Positives = 206/359 (57%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+ LP IA +P RD++RLM + +++ ++S++ A D +V
Sbjct: 1 MQLNDFDYYLPTELIAQQPAQNRDASRLMTLDRVNG---ELNETIISEIAALFRDGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV--SPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L G + + L R+ W + SK K G ++
Sbjct: 58 INDTRVIPARLLGKKES-----GGRVEVFLVRRLLEPGEVWQCLIKASKSPKPGSLIILS 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ A V+++ + FS L+R + +G++PLPPYI R D D
Sbjct: 113 EG-----VVARVLERSELDTWAVSFSPVEGFLDR-LERIGSMPLPPYIRRSAGDD--DRE 164
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT +A+ +G+VAAPTAGLHFT LL ++ G+++ +TLHVG GTFMPV+V+D DH
Sbjct: 165 RYQTVFARAKGAVAAPTAGLHFTDALLQKIRQQGVEIAPLTLHVGLGTFMPVRVDDLKDH 224
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH E FI TA+A+N+ K+ GGR+V++GTT+ R LE A +G + P G +IFI
Sbjct: 225 RMHREYYFIPEATARAVNARKNDGGRVVALGTTTTRALEHAAAGNGSVQPGEGEADIFIC 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY F+ VD L++NFHLPKSTLLMLVSA G + Y A++ +RF+SYGD ++
Sbjct: 285 PGYTFKVVDALITNFHLPKSTLLMLVSALAGKDRLFNAYNEAVNRNFRFFSYGDAMFIY 343
>gi|218249064|ref|YP_002374435.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cyanothece
sp. PCC 8801]
gi|218169542|gb|ACK68279.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Cyanothece
sp. PCC 8801]
Length = 372
Score = 427 bits (1098), Expect = e-117, Method: Composition-based stats.
Identities = 150/371 (40%), Positives = 212/371 (57%), Gaps = 27/371 (7%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D+ LP IA PV PRDS+RL+V++ + + +LP +L S D +V
Sbjct: 6 LLASYDYHLPAELIAQSPVTPRDSSRLLVLNSLTTQV----HSVFRELPQWLRSGDLLVL 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNT+VI A+L G + + L +P SW +P K K+G + F
Sbjct: 62 NNTRVIPARLYGQKT-----TGAPVEILLLEEKAPLSWLALVKPGKRFKRGSQIWFPHSP 116
Query: 122 GQSR-----LEATVIDKW-NTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDA 174
++ L+ATVID TG LL F +E I +G IPLPPY+
Sbjct: 117 DETTESSVYLKATVIDVDPETGGRLLQFEADSVEAFWSAIEELGKIPLPPYVTSSEAQPG 176
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
+ YQT YA+ G+VAAPTAGLHFT +LL RL + GI+ ++TLHVG GTF PV+V D
Sbjct: 177 Q----YQTVYAQKPGAVAAPTAGLHFTPDLLQRLQAQGIQQSYITLHVGVGTFRPVEVGD 232
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET------ATTEDGIINP 288
H MHSE + + T +A+ K+RGGR+++VGTT +R LE A + G+I P
Sbjct: 233 ITQHQMHSEWLEVPSSTVEAIAETKARGGRVIAVGTTVVRSLEGVAQIAKAEGKSGLI-P 291
Query: 289 WSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
+ G T++FI PGY ++ V+ +++NFHLP+S+LLMLVSA G E +YQ AI YRFY
Sbjct: 292 FRGRTDLFIYPGYSWQVVEGMITNFHLPRSSLLMLVSALIGRERLMSVYQTAIDEKYRFY 351
Query: 349 SYGDTSLLFQK 359
S+GD L+ +
Sbjct: 352 SFGDGMLILPE 362
>gi|298483291|ref|ZP_07001470.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. D22]
gi|298270608|gb|EFI12190.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. D22]
Length = 352
Score = 426 bits (1097), Expect = e-117, Method: Composition-based stats.
Identities = 129/363 (35%), Positives = 193/363 (53%), Gaps = 15/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P+ RD +RLMV+H N I + D+ + + D +
Sbjct: 1 MKLSQFKFKLPEDKIALHPMKYRDESRLMVLHRNTGK---IEHKMFKDVLDYFDDKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK----EKTGARIEVFLLRELNEELRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDARD 176
D + A VID + L F G E ++ + +G PLP I RP++ D
Sbjct: 114 PDD---SMVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYSLGETPLPHSII-NRPVEPED 169
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+Q+ +AK +G+V APTA LHF+ L+ RL GI ++TLH G G F + VED
Sbjct: 170 AERFQSIFAKNEGAVTAPTASLHFSRELMKRLEIKGIDFAYITLHAGLGNFRDIDVEDLT 229
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE F++ + +N K G + +VGTT +R +E+A + DG + + G+TN F
Sbjct: 230 KHKMDSEQMFVNEMAVKTVNRAKDNGRNVCAVGTTVMRAIESAVSTDGHLKEFEGWTNKF 289
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + ++SNFH+P STLLM+V+AF G ++ Y A+ YRF +YGD L+
Sbjct: 290 IFPPYEFTVANSMISNFHMPLSTLLMIVAAFGGYDQVMDAYHVALKEGYRFGTYGDAMLI 349
Query: 357 FQK 359
K
Sbjct: 350 LDK 352
>gi|298244051|ref|ZP_06967858.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Ktedonobacter racemifer DSM 44963]
gi|297557105|gb|EFH90969.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Ktedonobacter racemifer DSM 44963]
Length = 379
Score = 426 bits (1097), Expect = e-117, Method: Composition-based stats.
Identities = 147/374 (39%), Positives = 220/374 (58%), Gaps = 28/374 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FD+ LP IA P+ PRDS+RL+VV ++ D+ +L D ++
Sbjct: 17 LKISDFDYHLPNELIAQTPIEPRDSSRLLVVKRQD---ETLAHQHFRDIEEYLQPGDLLI 73
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP---NSWSVYARPSKVIKKGDILHF 117
N ++VI A+L G R + L S ++W RP + +++G + F
Sbjct: 74 ANQSRVIPARLLGKRA----ESGGAVEVLLLAERSDLGQDTWEALVRPGRRLREGARIFF 129
Query: 118 FSQ-DGQSRLEATVIDKWNTGEILLVFSISG------------IELERQISLVGTIPLPP 164
++ + Q+RL ++++ G ++ F + G +++ + I +G +PLPP
Sbjct: 130 GAETEEQARLIGEILERTEAGGRVVRFHVPGRSQERQNDPYALLDVRQVIDEIGKMPLPP 189
Query: 165 YIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
YI D YQT YA+I+GS AAPTAGLHFT LL RL + G++ FVTLHVG
Sbjct: 190 YIHE----TLDDPERYQTVYARIRGSAAAPTAGLHFTPQLLERLRARGVRTGFVTLHVGL 245
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTED 283
TF PV+ ED +H MHSE +D TA +N ++RGGR+V+VGTTS+R+LE+ A+ +
Sbjct: 246 DTFRPVESEDVREHKMHSEEIELDETTAALINETRARGGRVVAVGTTSVRVLESVASLHE 305
Query: 284 GIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISH 343
G I P+ G T +FITPGYR++AVD L++NFHLP+STLL+LVSAF ++ YQ AI+
Sbjct: 306 GRIVPYKGHTRLFITPGYRYQAVDALITNFHLPRSTLLLLVSAFMTKPLMERAYQEAITE 365
Query: 344 AYRFYSYGDTSLLF 357
YRF+S+GD L+
Sbjct: 366 RYRFFSFGDAMLIL 379
>gi|255022138|ref|ZP_05294141.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acidithiobacillus caldus ATCC 51756]
gi|254968402|gb|EET25961.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acidithiobacillus caldus ATCC 51756]
Length = 346
Score = 426 bits (1097), Expect = e-117, Method: Composition-based stats.
Identities = 139/358 (38%), Positives = 202/358 (56%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F + LPP RIA P+ R ++RL+V+ P + D V +LP FL + D +V
Sbjct: 1 MKKSDFYYHLPPERIAQEPLPERSASRLLVLDPRTG---HLCDSSVRELPQFLRAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+V+ A+L+ + + L ++P+ AR SK +K G +
Sbjct: 58 FNDTRVLPARLHARKP-----TGGAVELLLERLLAPDRARFLARSSKTLKPGARITLAGG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ L G ++ + G + G +PLPPYI R A D Y
Sbjct: 113 EAVELL-------AREGRMVELGLPGGGNWLDILEAQGEVPLPPYI--DRAPAAADRERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF ++LL+RL + G++ +TLHVGAGTF+PV+ E+ ++H M
Sbjct: 164 QTVYARNPGAVAAPTAGLHFDADLLARLDAAGMERAHITLHVGAGTFLPVEAEEVEEHRM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A T + + ++RGGRI ++GTT+ R LE A G + ++G T+IF+ PG
Sbjct: 224 HSERVTVPAATVEQVRRAQARGGRIFAIGTTACRALEGAARS-GSLQAFAGETDIFLYPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
FR +D L +NFHLP+STLLMLVSA G E Y HA++ YRF+SYGD L+
Sbjct: 283 RPFRVIDGLFTNFHLPESTLLMLVSALAGRERILAAYAHAVAQQYRFFSYGDAMLILP 340
>gi|160884925|ref|ZP_02065928.1| hypothetical protein BACOVA_02915 [Bacteroides ovatus ATCC 8483]
gi|237716908|ref|ZP_04547389.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. D1]
gi|237722117|ref|ZP_04552598.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 2_2_4]
gi|260172716|ref|ZP_05759128.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. D2]
gi|262405676|ref|ZP_06082226.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 2_1_22]
gi|293368622|ref|ZP_06615229.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
ovatus SD CMC 3f]
gi|294644382|ref|ZP_06722145.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
ovatus SD CC 2a]
gi|294810219|ref|ZP_06768884.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
xylanisolvens SD CC 1b]
gi|299145177|ref|ZP_07038245.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 3_1_23]
gi|315921006|ref|ZP_07917246.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|156109960|gb|EDO11705.1| hypothetical protein BACOVA_02915 [Bacteroides ovatus ATCC 8483]
gi|229442891|gb|EEO48682.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. D1]
gi|229448986|gb|EEO54777.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 2_2_4]
gi|262356551|gb|EEZ05641.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 2_1_22]
gi|292636264|gb|EFF54749.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
ovatus SD CMC 3f]
gi|292640217|gb|EFF58472.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
ovatus SD CC 2a]
gi|294442576|gb|EFG11378.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
xylanisolvens SD CC 1b]
gi|295085896|emb|CBK67419.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
xylanisolvens XB1A]
gi|298515668|gb|EFI39549.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 3_1_23]
gi|313694881|gb|EFS31716.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 352
Score = 426 bits (1097), Expect = e-117, Method: Composition-based stats.
Identities = 128/363 (35%), Positives = 193/363 (53%), Gaps = 15/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P+ RD +RLMV+H N I + D+ + + D +
Sbjct: 1 MKLSQFKFKLPEDKIALHPMKYRDESRLMVLHRNTGK---IEHKMFKDVLDYFDDKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK----EKTGARIEVFLLRELNEELRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDARD 176
D + A VID + L F G E ++ + +G PLP I RP++ D
Sbjct: 114 PDD---SMVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYSLGETPLPHSII-NRPVEPED 169
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+Q+ +AK +G+V APTA LHF+ L+ RL G+ ++TLH G G F + VED
Sbjct: 170 AERFQSIFAKNEGAVTAPTASLHFSRELMKRLEIKGVDFAYITLHAGLGNFRDIDVEDLT 229
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE F++ + +N K G + +VGTT +R +E+A + DG + + G+TN F
Sbjct: 230 KHKMDSEQMFVNEMAVKTVNRAKDNGRNVCAVGTTVMRAIESAVSTDGHLKEFEGWTNKF 289
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + ++SNFH+P STLLM+V+AF G ++ Y A+ YRF +YGD L+
Sbjct: 290 IFPPYEFTVANSMISNFHMPLSTLLMIVAAFGGYDQVMDAYHVALKEGYRFGTYGDAMLI 349
Query: 357 FQK 359
K
Sbjct: 350 LDK 352
>gi|254497614|ref|ZP_05110399.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Legionella
drancourtii LLAP12]
gi|254353163|gb|EET11913.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Legionella
drancourtii LLAP12]
Length = 338
Score = 426 bits (1097), Expect = e-117, Method: Composition-based stats.
Identities = 143/357 (40%), Positives = 209/357 (58%), Gaps = 19/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F FDLP IA P+ R +RL+ + ++ H D+ FL D +V
Sbjct: 1 MNKQDFYFDLPSELIAQYPLANRSDSRLLTYNRHIG---EYGHHQFRDIADFLKPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N++KVI A+L G + ++ + ++ + + SK +K G +++
Sbjct: 58 MNDSKVIPARLYGHKA-----TGGKVELLVERITGEFTFLAHIKASKALKAGALIYLEQD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ V+++ + L S I++ + + VG +PLPPYI R + D Y
Sbjct: 113 R-----QLEVLERHDD----LFVCKSNIDVLQLLHGVGHMPLPPYITRSDEVMDED--RY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GSVAAPTAGLHF +L+ L + G+ + VTLHVGAGTF PV+ E+ +H M
Sbjct: 162 QTVYAKYEGSVAAPTAGLHFDEAVLASLHARGVDIAHVTLHVGAGTFRPVRCENIKEHKM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE ++ A+++ K+ G R+++VGTT+LR LE+A E G++ P S TNIFI PG
Sbjct: 222 HSEHFTLNPELCSAVHATKAAGNRVIAVGTTALRSLESAAQEGGVLTPCSRDTNIFIYPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ D LM+NFHLP+STLLMLVSAF G +E +YQ AI+ YRF+SYGDTSLL
Sbjct: 282 YKFKICDGLMTNFHLPESTLLMLVSAFIGYKEAMMLYQEAIAKGYRFFSYGDTSLLL 338
>gi|289665553|ref|ZP_06487134.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
campestris pv. vasculorum NCPPB702]
gi|289667763|ref|ZP_06488838.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
campestris pv. musacearum NCPPB4381]
Length = 356
Score = 426 bits (1097), Expect = e-117, Method: Composition-based stats.
Identities = 142/365 (38%), Positives = 208/365 (56%), Gaps = 22/365 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F++ LP IA P+ R ++RL+VV P P ++D V DLP L D ++
Sbjct: 1 MKKSDFNYSLPEELIAQAPLAERAASRLLVVPP---SPQALADRQVRDLPELLQPGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + V SK K G ++
Sbjct: 58 FNDTRVIPARLFGQKAS-----GGRVEILIERLLGEREARVQIGASKSPKAGSLIAL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ +A V+ + GE L+ LE + G +PLPPYI R+ ++ D Y
Sbjct: 110 --DAGGQAEVLGR--DGEFYLLRFEIPTPLEHWLLEAGRLPLPPYIRREPGVE--DRERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF LL++L G++ VTLHVGAGTF PV+V+ D H+M
Sbjct: 164 QTVFAREVGAVAAPTAGLHFDEPLLAQLRERGVEFGHVTLHVGAGTFQPVRVDKLDQHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-----TTEDGIINPWSGFTNI 295
H E + A + + ++RGGR+++VGTT +R LE+A +G + P++G T I
Sbjct: 224 HKEWLNVGAALVEQVRRTRARGGRVIAVGTTVVRSLESAWRKTDAAPEGELQPFAGETQI 283
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGYR R+VD +++NFHLP+STL+M+VSAF G E + Y HAI+ YRF+SYGD L
Sbjct: 284 FILPGYRIRSVDAMVTNFHLPESTLMMMVSAFAGRERIFEAYDHAIAQRYRFFSYGDAML 343
Query: 356 LFQKR 360
L+ +
Sbjct: 344 LWSRE 348
>gi|330975882|gb|EGH75948.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. aptata str. DSM 50252]
Length = 354
Score = 426 bits (1097), Expect = e-117, Method: Composition-based stats.
Identities = 146/358 (40%), Positives = 201/358 (56%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S+RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTLDGPTGA---LAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKDS-----GGKLEILVERVLDSHRVLAHVRSSKSPKPGSSILI--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
EA ++ + + L E+ + VG +PLPPYI RP + D Y
Sbjct: 110 --DGGGEAEMVARHDALFELRFAE----EVLPLLERVGHMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDQPLLDAIAAKGVETAFVTLHVGAGTFQPVRVEQIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + ++RGGR+++VGTTS+R LE+A DG + P+SG T+IFI PG
Sbjct: 222 HSEWLEVGQDVVDAVAACRARGGRVIAVGTTSVRSLESAAR-DGELKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFSYGDAMFITR 338
>gi|222637741|gb|EEE67873.1| hypothetical protein OsJ_25689 [Oryza sativa Japonica Group]
Length = 1723
Score = 426 bits (1097), Expect = e-117, Method: Composition-based stats.
Identities = 145/359 (40%), Positives = 206/359 (57%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +F +DLP IA P+ R ++RL++V P P +D V DLP+ L D +V
Sbjct: 1381 LKKSDFHYDLPAELIAQAPLAERSASRLLLVPP---APDGFTDLQVRDLPSLLQPGDLLV 1437
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + SK K G +
Sbjct: 1438 FNDTRVIPARLFGQKAS-----GGRVEILIERLLGGQQARAQVGASKSPKAGSRIAL--- 1489
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ EA V+ + GE ++ LE+ + G +PLPPYI R+ +D D Y
Sbjct: 1490 --DAGGEAEVLGR--DGEFYVLQFHVPESLEQWLLHAGRLPLPPYIQREPGVD--DRERY 1543
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF LL+ L + G++ VTLHVGAGTF PV+ +D DH+M
Sbjct: 1544 QTVFAREVGAVAAPTAGLHFDEPLLAALKNKGVEFGHVTLHVGAGTFQPVRADDLKDHVM 1603
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A Q + ++ GGR++ VGTT +R LE+A DG + P++G T IFITPG
Sbjct: 1604 HREWLNVGAELVQQVRRTRAAGGRVIGVGTTVVRALESAMR-DGELLPFAGETQIFITPG 1662
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YR R+VD +++NFHLP+STLLM++SAF G + + YQHAI YRF+SYGD LLF +
Sbjct: 1663 YRIRSVDAMVTNFHLPESTLLMMISAFAGKDRVFEAYQHAIEQRYRFFSYGDAMLLFPQ 1721
>gi|71274879|ref|ZP_00651167.1| Queuosine biosynthesis protein [Xylella fastidiosa Dixon]
gi|71901845|ref|ZP_00683909.1| Queuosine biosynthesis protein [Xylella fastidiosa Ann-1]
gi|170729868|ref|YP_001775301.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xylella
fastidiosa M12]
gi|238687969|sp|B0U6A9|QUEA_XYLFM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|71164611|gb|EAO14325.1| Queuosine biosynthesis protein [Xylella fastidiosa Dixon]
gi|71728396|gb|EAO30563.1| Queuosine biosynthesis protein [Xylella fastidiosa Ann-1]
gi|167964661|gb|ACA11671.1| S-adenosylmethionine: tRNA ribosyltransferase-isomerase [Xylella
fastidiosa M12]
Length = 347
Score = 426 bits (1097), Expect = e-117, Method: Composition-based stats.
Identities = 146/359 (40%), Positives = 208/359 (57%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +F +DLP IA P+ R ++RLM+V S P D V DLP L D +V
Sbjct: 2 LKKSDFHYDLPEELIAQGPLPERSASRLMLVP---SAPEQFQDCYVRDLPELLQPGDLLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + + V R S+ +K G+ +
Sbjct: 59 FNDTRVIPARLFGRKVS-----GGRVEVLIERFLGTHQAVVQLRTSRSLKVGNRILL--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A V+ + GE L+ LE+ +S VG +PLPPYI R+ D D Y
Sbjct: 111 --DAGGHAEVLGR--DGEFYLLSFDVESPLEQWLSDVGQLPLPPYIHRE--PDEYDRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF +LL+RL + G++ ++TLHVGAGTF PV+V +H+M
Sbjct: 165 QTVFARAVGAVAAPTAGLHFDESLLARLRARGVEFGYITLHVGAGTFQPVRVALLQEHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A + + S ++RGGR+++VGTT +R LE+A G + P+ G T IFI PG
Sbjct: 225 HSEWFKVGAELVEQVRSARARGGRVIAVGTTVVRSLESAMRH-GELQPFVGETQIFIFPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
Y R+VD +++NFHLP+STLLMLV+AF G Y HA+ YRF+SYGD LLF +
Sbjct: 284 YCIRSVDAMVTNFHLPESTLLMLVAAFAGRTRILDAYYHAVQQRYRFFSYGDAMLLFPR 342
>gi|167752308|ref|ZP_02424435.1| hypothetical protein ALIPUT_00552 [Alistipes putredinis DSM 17216]
gi|167660549|gb|EDS04679.1| hypothetical protein ALIPUT_00552 [Alistipes putredinis DSM 17216]
Length = 349
Score = 426 bits (1097), Expect = e-117, Method: Composition-based stats.
Identities = 133/361 (36%), Positives = 190/361 (52%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + ++ +D +A P RD +RLMVV+ I + ++ + + D +
Sbjct: 1 MKLSQYGYDFSADLLAKYPAENRDESRLMVVNRAKGT---IEHRIFKEIIEYFDEKDLFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV--SPNSWSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + EI L + W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK----EKTGAEIEIFLLRELNRELRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D L A VID + L F G E + + +G PLP ++ K ++ D
Sbjct: 114 DDD---LLVAEVIDNTTSRGRTLRFLFDGSYEEFKETLFKLGETPLPKWVREK--VEPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT +A +G+VAAPTAG+HF+ +L R+ GI+ F+TLHVG G F V VED
Sbjct: 169 AERYQTIFASKEGAVAAPTAGMHFSKHLFKRMEIKGIEKAFITLHVGLGNFRTVDVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE F+D PTA+ +N K G +IVS+GTT +R LETA + G+I P G+TN F
Sbjct: 229 KHKMDSEQFFVDEPTAETVNKTKREGHKIVSIGTTVMRTLETAVSTGGMIKPMEGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I Y F D +++NF LP ST LM+VSAF G + Y+ A YRF +YGD L+
Sbjct: 289 IFAPYEFSVADAMVTNFQLPYSTQLMMVSAFGGYDLIMNAYKIAKEEGYRFGTYGDAMLI 348
Query: 357 F 357
Sbjct: 349 L 349
>gi|254513957|ref|ZP_05126018.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [gamma
proteobacterium NOR5-3]
gi|219676200|gb|EED32565.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [gamma
proteobacterium NOR5-3]
Length = 352
Score = 426 bits (1097), Expect = e-117, Method: Composition-based stats.
Identities = 139/359 (38%), Positives = 203/359 (56%), Gaps = 13/359 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F ++LP IA +P+ R ++RL+ V S + +DLPA LN++D +V
Sbjct: 1 MQRSDFTYELPQELIAQQPLAERSASRLLCVDGRTS---EMVHRHFADLPALLNADDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+V+ A+L GV+ + + S + R SK + G + ++
Sbjct: 58 FNDTRVLPARLYGVKE-----TGGRVEILIERLTGETSALAHIRASKTPRAGQAIALAAE 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ V + GE L S L ++ +G +PLPPYI R I+ D Y
Sbjct: 113 SDSPATDLQVRVEGREGE--LFQISSAQALGPMLARIGHMPLPPYIDRTDAIE--DRERY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF + LL L +G++ VTLHVGAGTF PV+ +D +H M
Sbjct: 169 QTVYAQRDGAVAAPTAGLHFDNALLQTLDEMGVRRAHVTLHVGAGTFQPVRSDDIREHQM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E ++ A+ + + GGR+V+VGTT++R LETA G + P+ G T +FI PG
Sbjct: 229 HAEYLEVNQSVCDAIAATRECGGRVVAVGTTAVRSLETAAAT-GQLAPYVGDTRLFIYPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
Y F+ VD +++NFHLP+STLLMLVSAFCG + Y A++ YRF+SYGD L +
Sbjct: 288 YAFQCVDAMITNFHLPESTLLMLVSAFCGRDLMLDAYNAAVAERYRFFSYGDAMFLTPQ 346
>gi|115524776|ref|YP_781687.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodopseudomonas palustris BisA53]
gi|122296024|sp|Q07MX7|QUEA_RHOP5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|115518723|gb|ABJ06707.1| Queuosine biosynthesis protein [Rhodopseudomonas palustris BisA53]
Length = 358
Score = 426 bits (1097), Expect = e-117, Method: Composition-based stats.
Identities = 187/362 (51%), Positives = 242/362 (66%), Gaps = 11/362 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M FDFDLP IALRP PRD+AR++VV + D +VS+LP +L DA+V
Sbjct: 1 MRTDLFDFDLPQGAIALRPASPRDAARMLVVE----ASGALHDRVVSELPEWLRPGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI AQL G R E +I TL R+ + W +P+K + GDI+ F
Sbjct: 57 VNDTKVIAAQLTGRRI--GRDTEPKIDATLIKRLDGSRWQALVKPAKKLLPGDIVRF-GH 113
Query: 121 DGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
DG+ +L+ATV K GEI+L F++ G L++ I+ +G PLPPYIA KR D RD
Sbjct: 114 DGRVCLLGQLDATVEAKGEAGEIILAFTLHGPVLDQAIAELGAPPLPPYIASKRAPDDRD 173
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT +A +G+VAAPTAGLHFT L L + G+ ++ VTLHVGAGTF+PVK EDT
Sbjct: 174 AADYQTMFAANEGAVAAPTAGLHFTKALEQALAARGVTLHRVTLHVGAGTFLPVKTEDTA 233
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+H MH+E G + TA ALN+ ++ GRIV+VGTTSLRLLE+A +DG + P++ T IF
Sbjct: 234 EHKMHAEWGCLSRETADALNAARAADGRIVAVGTTSLRLLESAAGDDGRLAPFADDTAIF 293
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRF+AVD+LM+NFHLP+STL MLVSAF G++ ++ Y HAI YRFYSYGD LL
Sbjct: 294 ITPGYRFKAVDVLMTNFHLPRSTLFMLVSAFAGLDTMQRAYAHAIKSGYRFYSYGDACLL 353
Query: 357 FQ 358
F+
Sbjct: 354 FR 355
>gi|21243247|ref|NP_642829.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
axonopodis pv. citri str. 306]
gi|24212185|sp|Q8PJL6|QUEA_XANAC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|21108780|gb|AAM37365.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
axonopodis pv. citri str. 306]
Length = 356
Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats.
Identities = 144/365 (39%), Positives = 207/365 (56%), Gaps = 22/365 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R ++RL+VV P P ++D V DLP L D ++
Sbjct: 1 MKKSDFHYDLPDELIAQAPLAERAASRLLVVPP---SPQALADRQVRDLPELLQPGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + V SK K G ++
Sbjct: 58 FNDTRVIPARLFGQKAS-----GGRVEILIERLLGERQARVQIGASKSPKAGSLIAL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ +A V+ + GE L+ LE + G +PLPPYI R+ ++ D Y
Sbjct: 110 --DAGGQAEVLGR--DGEFYLLRFEIPTPLEHWLLEAGRLPLPPYIRREPGVE--DRERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF LL+RL G++ VTLHVGAGTF PV+V+ D H+M
Sbjct: 164 QTVFAREVGAVAAPTAGLHFDEPLLARLRERGVEFGHVTLHVGAGTFQPVRVDKLDQHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-----TTEDGIINPWSGFTNI 295
H E + A + + ++RGGR+++VGTT +R LE+A +G + P++G T I
Sbjct: 224 HKEWLNVGAALVEQVRRTRARGGRVIAVGTTVVRSLESAWRKTEAAPEGELQPFAGETQI 283
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGYR R+VD +++NFHLP+STL+M+VSAF G E Y HAI+ YRF+SYGD L
Sbjct: 284 FILPGYRIRSVDAMVTNFHLPESTLMMMVSAFAGRERIFAAYHHAIAQRYRFFSYGDAML 343
Query: 356 LFQKR 360
L+ +
Sbjct: 344 LWGRE 348
>gi|294664106|ref|ZP_06729501.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 10535]
gi|292606127|gb|EFF49383.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 10535]
Length = 356
Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats.
Identities = 144/364 (39%), Positives = 209/364 (57%), Gaps = 22/364 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R ++RL+VV P P ++D V DLP L D ++
Sbjct: 1 MKKSDFHYDLPDELIAQAPLAERAASRLLVVPP---SPQALADRQVRDLPELLQPGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + V SK K G ++
Sbjct: 58 FNDTRVIPARLFGHKAS-----GGRVEILIERLLGERQARVQIGASKSPKAGSLIAL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ +A V+ + GE L+ LE + G +PLPPYI R+ ++ D Y
Sbjct: 110 --DAGGQAEVLGR--DGEFYLLRFEIPTPLEHWLLEAGRLPLPPYIRREPGVE--DRERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF LL+RL G++ VTLHVGAGTF PV+V+ D H+M
Sbjct: 164 QTVFAREVGAVAAPTAGLHFDEPLLARLRERGVEFGHVTLHVGAGTFQPVRVDKLDQHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-----TTEDGIINPWSGFTNI 295
H+E + A + + ++RGGR+++VGTT +R LE+A +G + P++G T I
Sbjct: 224 HTEWLNVGAALVEQVRRTRARGGRVIAVGTTVVRSLESAWRTTEAAPEGELQPFAGETQI 283
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGYR R+VD +++NFHLP+STL+M+VSAF G E Y+HAI+ YRF+SYGD L
Sbjct: 284 FILPGYRIRSVDAMVTNFHLPESTLMMMVSAFAGRERIFAAYRHAIAQRYRFFSYGDAML 343
Query: 356 LFQK 359
L+ +
Sbjct: 344 LWGR 347
>gi|28198472|ref|NP_778786.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xylella
fastidiosa Temecula1]
gi|182681150|ref|YP_001829310.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xylella
fastidiosa M23]
gi|32129946|sp|Q87DW7|QUEA_XYLFT RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|238691103|sp|B2I961|QUEA_XYLF2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|28056556|gb|AAO28435.1| S-adenosylmethionine: tRNA ribosyltransferase-isomerase [Xylella
fastidiosa Temecula1]
gi|182631260|gb|ACB92036.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Xylella
fastidiosa M23]
gi|307579595|gb|ADN63564.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xylella
fastidiosa subsp. fastidiosa GB514]
Length = 347
Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats.
Identities = 146/359 (40%), Positives = 208/359 (57%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +F +DLP IA P+ R ++RLM+V S P D V DLP L D +V
Sbjct: 2 LKKSDFHYDLPEELIAQGPLPERSASRLMLVP---SAPEQFQDCYVRDLPELLQPGDLLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + + V R S+ +K G+ +
Sbjct: 59 FNDTRVIPARLFGRKVS-----GGRVELLIERFLGTHQAVVQLRTSRSLKVGNRILL--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A V+ + GE L+ LE+ +S VG +PLPPYI R+ D D Y
Sbjct: 111 --DAGGHAEVLGR--DGEFYLLSFDVESPLEQWLSDVGQLPLPPYIHRE--PDEYDRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF +LL+RL + G++ ++TLHVGAGTF PV+V +H+M
Sbjct: 165 QTVFARSVGAVAAPTAGLHFDESLLARLRARGVEFGYITLHVGAGTFQPVRVALLQEHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A + + S ++RGGR+++VGTT +R LE+A G + P+ G T IFI PG
Sbjct: 225 HSEWFKVGAELVEQVRSARARGGRVIAVGTTVVRSLESAMRH-GELQPFVGETQIFIFPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
Y R+VD +++NFHLP+STLLMLV+AF G Y HA+ YRF+SYGD LLF +
Sbjct: 284 YCIRSVDAMVTNFHLPESTLLMLVAAFAGRTRILDAYYHAVQQRYRFFSYGDAMLLFPR 342
>gi|91207399|sp|Q6N6L0|QUEA_RHOPA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
Length = 360
Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats.
Identities = 194/362 (53%), Positives = 249/362 (68%), Gaps = 11/362 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDFDLP IALRPV PRD+AR++VV P + D +V DLPA L D +V
Sbjct: 1 MRTELFDFDLPAENIALRPVSPRDAARMLVVRPG----APLEDRIVRDLPALLAPGDQLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI AQL G R E +I TL R+ W +P+K + GD++ F
Sbjct: 57 VNDTRVIAAQLTGRRIGRG--LEPKIEATLIKRLDGARWQALVKPAKKLLPGDVVRF-GH 113
Query: 121 DGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
DG+ L+ATV K + GE+ LVFS G L++ I+ VG PLPPYIA KR DA+D
Sbjct: 114 DGRVCLLGHLDATVEAKGDAGEVTLVFSFHGPVLDQAIAEVGATPLPPYIASKRAPDAQD 173
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT +A +G+VAAPTAGLHFT+ L + L + G+ ++ +TLHVGAGTF+PVK EDT
Sbjct: 174 IADYQTMFASNEGAVAAPTAGLHFTAELETALAACGVGLHRITLHVGAGTFLPVKAEDTS 233
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+H MH+E G I + TA+ALN+ ++ GGRIV+VGTTSLRLLE+A +DG I P++ T+IF
Sbjct: 234 EHRMHAEWGTISSGTAEALNAARAAGGRIVAVGTTSLRLLESAARDDGRIAPFADETSIF 293
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFRAVD+LM+NFHLP+STL MLVSAFCG++ + Y HAI YRFYSYGD SLL
Sbjct: 294 ITPGYRFRAVDVLMTNFHLPRSTLFMLVSAFCGLDTMQAAYAHAIRTGYRFYSYGDASLL 353
Query: 357 FQ 358
F+
Sbjct: 354 FR 355
>gi|325109089|ref|YP_004270157.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Planctomyces brasiliensis DSM 5305]
gi|324969357|gb|ADY60135.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Planctomyces brasiliensis DSM 5305]
Length = 354
Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats.
Identities = 137/356 (38%), Positives = 198/356 (55%), Gaps = 9/356 (2%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D+ LP IA PV PRD +RL+V I +LP +L +ND +++N
Sbjct: 7 IEAYDYHLPEELIAQHPVEPRDHSRLLVYRR---ADQSIVHRRFHNLPEYLRANDCLIWN 63
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
T+V+ A+L G R + ++ W + + +K G+ L
Sbjct: 64 QTRVVPARLYGRRA----ETGGKWEGLFLKLLADGDWEIIGQTRGKLKAGEFLEIPHPGS 119
Query: 123 QSRLEATVIDKWNTGEILLVFSISGI-ELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ L+ +I++ G + +G + G+IPLPPYI +A D YQ
Sbjct: 120 EDVLQLKLIERREGGCWIARPETNGEVSPWDLLDQFGSIPLPPYIQDGHASEA-DRERYQ 178
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YA+ G+VAAPTAGLHFT L+ R + G+ VTLHVG GTF PV V++ D H MH
Sbjct: 179 TVYAQTPGAVAAPTAGLHFTPELIERCQAAGVDCSSVTLHVGLGTFRPVSVDNLDAHQMH 238
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E + + T L GGR ++VGTT++R LETA+ E G + PW G +++FI PGY
Sbjct: 239 REWCEVTSETVGQLQRCYEAGGRRIAVGTTTVRTLETASRESGQLQPWDGESDLFIRPGY 298
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+FR+ D L++NFHLPKSTLL+++SA G EE ++Y+ AIS YRFYSYGD L+
Sbjct: 299 QFRSTDGLITNFHLPKSTLLIMLSAMVGREEILRIYEEAISEQYRFYSYGDAMLIL 354
>gi|110833361|ref|YP_692220.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Alcanivorax
borkumensis SK2]
gi|122959653|sp|Q0VSA0|QUEA_ALCBS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|110646472|emb|CAL15948.1| S-adenosylmethionine:tRNAribosyltransferase-isom e rase
[Alcanivorax borkumensis SK2]
Length = 359
Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats.
Identities = 146/359 (40%), Positives = 200/359 (55%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDF+LP IA P R ARL+ + + DL + ++ D ++
Sbjct: 1 MNVDDFDFELPDRLIARHPPAQRRDARLLAL-----TCDALEHQQFPDLLSHVHPGDLLI 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + ++ + V + + R SK K G L F
Sbjct: 56 FNDTRVIPARLFGQKES-----GGKVEVLIERVVDDHEALAHVRASKSPKPGSWLEFAKG 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISG---IELERQISLVGTIPLPPYIARKRPIDARDY 177
+ A V + +L FS+ G L + L+G +PLPPYI RP + D
Sbjct: 111 -----IRAQVTGRRGA-LFILHFSLPGNGCDTLLSALELIGHVPLPPYI--DRPDEDGDM 162
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YA+ G+VAAPTAGLHF +L+ L G+ + FVTLHVGAGTF PV+V+ +D
Sbjct: 163 ERYQTVYAREPGAVAAPTAGLHFDDAMLAALEQRGVDIGFVTLHVGAGTFQPVRVDKVED 222
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MHSE I + + +RGGR+V+VGTT+LR LE A ++ G ++ G T+IFI
Sbjct: 223 HHMHSERYQIPGSLVEQVAQAHARGGRVVAVGTTALRALEAA-SQSGGLHAGQGETDIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGYRFR VD L++NFHLPKSTLLML+SAF G + Y+ AI YRF+SYGD +
Sbjct: 282 FPGYRFRLVDALVTNFHLPKSTLLMLISAFAGRDRIMGAYRAAIEAQYRFFSYGDAMFI 340
>gi|81301157|ref|YP_401365.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus elongatus PCC 7942]
gi|123556309|sp|Q31KP1|QUEA_SYNE7 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|81170038|gb|ABB58378.1| S-adenosylmethionine [Synechococcus elongatus PCC 7942]
Length = 359
Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats.
Identities = 141/358 (39%), Positives = 190/358 (53%), Gaps = 14/358 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +D++LPP RIA V PRD ARL+V + DLP L D ++
Sbjct: 10 HLDAYDYELPPDRIAQSAVEPRDHARLLVF----PDREQLWHRHFYDLPQLLRPGDLLIV 65
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+VI A+L G + + L P W +P K +K G + F
Sbjct: 66 NDTRVIPARLYGQKI----ETGVPVEVLLVEEHGPGYWLTLVKPGKRLKPGSAIAFGPNP 121
Query: 122 GQSRLEATVIDKWN-TGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A V TG L F Q++ +G +PLPPYI A D Y
Sbjct: 122 EDPLLVADVEASDPATGGRWLRFRGEAEAFWSQLATLGEMPLPPYIH----TTASDPERY 177
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHFT LL+ L +GI VTLHVG GTF V VED H M
Sbjct: 178 QTVYSRELGAVAAPTAGLHFTPELLTTLADMGIATAPVTLHVGIGTFRSVDVEDIRQHEM 237
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A T + + + K+ GGR+++VGTTS+R +E A G + P S N+FI PG
Sbjct: 238 HSERMMVPAATVEKIQATKAAGGRVIAVGTTSVRAIEGAAAS-GELKPGSDRVNLFIYPG 296
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YR++ +D L++NFHLP+S+L+MLVSA G + Y AI+ YRFYS+GD L+
Sbjct: 297 YRWQIIDGLITNFHLPRSSLMMLVSALIGRDRLLSAYATAIAEQYRFYSFGDAMLILP 354
>gi|114320370|ref|YP_742053.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Alkalilimnicola ehrlichii MLHE-1]
gi|122311890|sp|Q0A9C4|QUEA_ALHEH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|114226764|gb|ABI56563.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Alkalilimnicola ehrlichii MLHE-1]
Length = 345
Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats.
Identities = 141/356 (39%), Positives = 199/356 (55%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP + IA P R +RL+ + + ++D DL L D +V
Sbjct: 1 MHVDDFSFDLPEALIAHHPPEQRRDSRLLCLDRDTGA---VADRRFPDLVDLLRPEDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G + + + + + R SKV G +L
Sbjct: 58 LNDTRVIPARLFGHKP-----TGGRVEVLVERPLDRHRVLARLRASKVPAPGTVLTL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A V + GE + + + + G +PLPPYI +R A D Y
Sbjct: 110 --EGGVAAEVTGR--EGEFFTLRFTAEQTVLELLEHHGHMPLPPYI--RRADVAADRERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF + LL+R+ + G+ +VTLHVG+GTF P++V D +H M
Sbjct: 164 QTVFARRPGAVAAPTAGLHFDNELLARIGARGVDTAWVTLHVGSGTFAPLRVSDPREHRM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + T A+ + RGGR+V+VGTT +R LETA +DG + P+ G T+IFI PG
Sbjct: 224 HSEWLDVPPATCAAIERARGRGGRVVAVGTTVVRALETAA-QDGAVQPYQGETDIFIYPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+RF AVD L++NFHLP STLLMLVSAF G E Y+HA++ YRF+SYGD +
Sbjct: 283 HRFHAVDALVTNFHLPGSTLLMLVSAFAGRERVLAAYRHAVAQRYRFFSYGDAMFI 338
>gi|254423170|ref|ZP_05036888.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus sp. PCC 7335]
gi|196190659|gb|EDX85623.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus sp. PCC 7335]
Length = 374
Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats.
Identities = 130/360 (36%), Positives = 197/360 (54%), Gaps = 16/360 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ + + LP RIA PV PRD ++L+V+ P +L +L D ++F
Sbjct: 22 QLSAYSYLLPEGRIAQNPVTPRDHSKLLVIDG----PQSHRHSHFYNLGDWLMPGDLLIF 77
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKVI A+L G + + + L + W RP + I G + F
Sbjct: 78 NDTKVIPARLYGQKVSGAS-----VEVLLIEPTVDDRWLALVRPGRRIPPGTEIVF-GDS 131
Query: 122 GQSRLEATVIDKWNT--GEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
Q + A V + + G I+ + ++ I +G +PLPPYI + +
Sbjct: 132 AQPLMSALVESRDESTGGRIIRLLPKVDKTIDALIHQLGQMPLPPYITESTSLPEQ---- 187
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A+ QG++AAPTAGLHFT +LL +L + GI+ +TLHVG GTF PV+V D + H
Sbjct: 188 YQTVFAQKQGAIAAPTAGLHFTQSLLDKLNAKGIQTAEITLHVGIGTFRPVEVSDIETHE 247
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH E + A T + + K+ GGR+++VGTTS R LE G + P+ G T++FI P
Sbjct: 248 MHKERIEVSAETVKRIKKTKANGGRVITVGTTSTRALEGVAAICGELQPYRGKTDLFIYP 307
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GY+++ +D +++NFHLP S+LLM++SA G + +YQ AI YRFYS+GD L+ +
Sbjct: 308 GYQWQVIDGMITNFHLPGSSLLMMISALVGRKRLMTVYQAAIEQDYRFYSFGDAMLILPE 367
>gi|254437697|ref|ZP_05051191.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Octadecabacter antarcticus 307]
gi|198253143|gb|EDY77457.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Octadecabacter antarcticus 307]
Length = 350
Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats.
Identities = 161/361 (44%), Positives = 229/361 (63%), Gaps = 14/361 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP S IA+RP PR SA+L+V + + D V+DL + L + D +V
Sbjct: 1 MKLSDFDFDLPDSLIAVRPARPRSSAKLLVAGGDGT-----RDLRVTDLVSVLRAGDHLV 55
Query: 61 FNNTKVITAQLNG--VRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+L G +R +I TL + +W+ +P + ++ G+ + F
Sbjct: 56 LNDTKVIPARLVGERMRKSTDGAGLAKIEVTLLEPQADGTWAALIKPLRKVRDGERVVFS 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
L A ++ +++ G L F+++G + + ++ G +PLPPYIA KRP D D
Sbjct: 116 DD-----LSAVLVHRFD-GMGYLDFNVTGDDFDAALNAAGAMPLPPYIAAKRPADDLDKE 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A G+VAAPTA LHF LL L ++G+K +VTLHVGAGTF+PVKV+D DH
Sbjct: 170 DYQTVWAARSGAVAAPTASLHFEQWLLDDLAAMGVKFSYVTLHVGAGTFLPVKVDDVADH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
+MHSE G + A +A + + K+ GGR++ VGTT+ RL+ETA G + W G T+IFIT
Sbjct: 230 VMHSEWGQVSALSASDIMATKAAGGRVIPVGTTACRLIETAGAS-GTLAAWEGETDIFIT 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ F+ D LM+NFHLPKSTL+MLVSA G + K +Y HAI++ YRF+SYGD+S+L
Sbjct: 289 PGFEFQITDGLMTNFHLPKSTLMMLVSALMGSQRIKDIYAHAIANEYRFFSYGDSSILLP 348
Query: 359 K 359
K
Sbjct: 349 K 349
>gi|294013326|ref|YP_003546786.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Sphingobium
japonicum UT26S]
gi|292676656|dbj|BAI98174.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Sphingobium
japonicum UT26S]
Length = 344
Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats.
Identities = 184/358 (51%), Positives = 230/358 (64%), Gaps = 16/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLPP IALRP PR SARL++ + D +V DLP L D +V
Sbjct: 1 MRVDLFDFDLPPESIALRPASPRHSARLLLAAGD----APFQDRIVRDLPGLLRPGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R + +I TLH R+ W + R +K ++ GD + F +
Sbjct: 57 FNDTKVIPAQLEGMR------GQAKIGATLHKRLGLRQWQAFLRNAKRVRDGDRIDFGNG 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A + G ++L F +E + G +PLPPYIA KRP D RD DY
Sbjct: 111 -----VTAVAGPRDEEGGVMLRFEGE-EPVELLLERAGRMPLPPYIASKRPTDERDRSDY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTA LHFT L++ + GI +TLHVGAGTF+PVK EDTDDH M
Sbjct: 165 QTMFAREDGAVAAPTAALHFTPELMTAIEKAGIGTETLTLHVGAGTFLPVKAEDTDDHHM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G ID TA LN+ ++ GGR+++VGTTSLRLLE+AT EDGII P+ T IFITPG
Sbjct: 225 HAEWGRIDQATAGRLNAARAAGGRLIAVGTTSLRLLESATGEDGIIRPFEDETRIFITPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRFRAVD LM+NFHLPKSTL MLVSA G E+ + +Y+HAI YRFYSYGD+SLL
Sbjct: 285 YRFRAVDGLMTNFHLPKSTLFMLVSALMGTEKMQSVYRHAIDGGYRFYSYGDSSLLLP 342
>gi|91207327|sp|Q5ZU04|QUEA_LEGPH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
Length = 337
Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats.
Identities = 141/357 (39%), Positives = 204/357 (57%), Gaps = 20/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F FDLP IA P+ R +RL++ + + ++ FL D +V
Sbjct: 1 MNKQDFYFDLPSELIAQYPLANRSDSRLLIYNRQT---EEYGHYQFREIADFLQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N++KVI A+L G + ++ + ++ + + SK +K D+++
Sbjct: 58 MNDSKVIPARLYGHKA-----TGGKVELLVERITGDFTFLAHIKASKSLKSNDLIYL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D RLE V+ + + L + + ++ +G IPLPPYIAR+ ++ D Y
Sbjct: 110 DAGKRLE--VLQRQDD----LFLCKACENILDLLNDLGHIPLPPYIARE--DESLDKERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GSVAAPTAGLHF +LS + + G+ + +VTLHVGAGTF PV+ E DH M
Sbjct: 162 QTVYAKCAGSVAAPTAGLHFDDAVLSSIRARGVNIAYVTLHVGAGTFRPVRCERIQDHKM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + KS G R+++VGTT+LR LE+A G + P S T+IFI PG
Sbjct: 222 HSEWFTVSPDLCTAVKAAKSMGNRVIAVGTTALRSLESAA-MGGELIPCSRDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ D L++NFHLP+STL+MLVSAF G +E +YQ AI YRF+SYGD SLL
Sbjct: 281 YQFKVCDGLITNFHLPESTLVMLVSAFIGHQECMALYQEAIDKRYRFFSYGDASLLL 337
>gi|113869066|ref|YP_727555.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ralstonia
eutropha H16]
gi|123133638|sp|Q0K734|QUEA_RALEH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|113527842|emb|CAJ94187.1| queuosine biosynthesis protein [Ralstonia eutropha H16]
Length = 352
Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats.
Identities = 152/363 (41%), Positives = 209/363 (57%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHP----NLSCPLVISDHLVSDLPAFLNSN 56
+ + +FDF LPP IA + R ++RL+VV + + + + D SD+ +L +
Sbjct: 2 LTLSDFDFPLPPELIAQSALPDRSASRLLVVERLAPADTADAVRMVDRAFSDIVDYLRPD 61
Query: 57 DAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
D +VFN+T+VI A+ G + +I + V ++ R SK +G ILH
Sbjct: 62 DLLVFNDTRVIKARFFGHKPS-----GGKIEVLVERVVDSHTVLAQVRASKTPTEGSILH 116
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
TV + + L + I G +PLPPYI DA D
Sbjct: 117 L----ADGAFAVTVGPRVDQFFTLRFPEPA----LDLIERYGRLPLPPYIRHD--PDAYD 166
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YA+ G+VAAPTAGLHF L +RL + G++ F+TLHVGAGTF PV+ E+
Sbjct: 167 ETRYQTVYARSPGAVAAPTAGLHFDDALFARLNAAGVRRAFLTLHVGAGTFQPVRTENLA 226
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+H MHSE + A AQA+ ++RGGR+++VGTTSLR LE+A DG + SG T+IF
Sbjct: 227 EHKMHSEWYAVSADLAQAVRDTRARGGRVIAVGTTSLRALESAAQADGTLAAGSGDTDIF 286
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFR VD L++NFHLPKSTLLMLVSA G+E + Y+HA+ YRF+SYGD LL
Sbjct: 287 ITPGYRFRLVDALITNFHLPKSTLLMLVSALAGVEAIRAAYRHAVEQRYRFFSYGDAMLL 346
Query: 357 FQK 359
++
Sbjct: 347 TRQ 349
>gi|254509984|ref|ZP_05122051.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodobacteraceae bacterium KLH11]
gi|221533695|gb|EEE36683.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodobacteraceae bacterium KLH11]
Length = 353
Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats.
Identities = 163/360 (45%), Positives = 213/360 (59%), Gaps = 14/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA RP PR SARL+V + I D V LP L D +V
Sbjct: 6 MKLSDFDFHLPEHLIATRPASPRSSARLLV-----AQEDAIQDRNVFHLPDLLQPGDRLV 60
Query: 61 FNNTKVITAQLNGVRF--CHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L+G R I TL W+ +P K +K G+ + F
Sbjct: 61 LNDTRVIPARLSGRRHRDSAQGPVSAAIEATLLEPQPDGCWAALIKPLKKVKPGEEIVFS 120
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
L AT +D+ + G+ L F+++G + + + G +PLPPYIA KR D +D
Sbjct: 121 DD-----LSAT-LDRVSDGQAYLRFNLTGEDFDHALEQAGAMPLPPYIAAKRAADEQDKT 174
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LL L + G+ VTLHVGAGTF+PVKVED H
Sbjct: 175 DYQTVWARNAGAVAAPTASLHFDDTLLRALAARGVAFTHVTLHVGAGTFLPVKVEDVTTH 234
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A A + + K+ GGR++ VGTT+LRL+E+A G I PW G T+IFI
Sbjct: 235 KMHAEWGRVSAQAAAEIAATKAAGGRVIPVGTTALRLIESAAR-GGQIAPWEGETDIFIY 293
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+RF D LM+NFHLPKSTLLMLVSA G + + +Y HAI+ YRF+SYGD SLL
Sbjct: 294 PGFRFHVTDALMTNFHLPKSTLLMLVSALMGQDRVRTIYDHAIAEEYRFFSYGDASLLIP 353
>gi|22298465|ref|NP_681712.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Thermosynechococcus elongatus BP-1]
gi|46577048|sp|Q8DKD7|QUEA_THEEB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|22294645|dbj|BAC08474.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Thermosynechococcus elongatus BP-1]
Length = 354
Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats.
Identities = 142/358 (39%), Positives = 203/358 (56%), Gaps = 21/358 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +D+ LPP RIA +PV PRD +RLMVV + + DH +LP L D +V N
Sbjct: 9 LDAYDYQLPPERIAQQPVSPRDRSRLMVVTRDTAA-----DHYFYELPQLLAPGDLLVLN 63
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+VI A+L G + R + L +S W +P + ++ G ++
Sbjct: 64 DTRVIPARLIGQKVGAAGRT---VEVFLLEELSDRQWLALVKPGRKLRPGAVIQI----- 115
Query: 123 QSRLEATV--IDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L+ATV ID+ G ++ G L + +G +PLPPYI D Y
Sbjct: 116 -GPLQATVQTIDEETRGRVIEFDLPPGDRLWSYLDHLGEVPLPPYIDHPLA----DTEQY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHFT L S+L GI F+TLHVG GTF PV+ +D H +
Sbjct: 171 QTVYARRPGAVAAPTAGLHFTPELFSKLADRGIDHCFLTLHVGIGTFRPVEAKDIRHHHL 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A T + + + K+ GGRI++VGTT +R LETA G + P+ G ++++I PG
Sbjct: 231 HEEWLEVSAATVERIQAAKAAGGRIIAVGTTVIRALETAA-HSGTLQPFCGKSDLYIYPG 289
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y+ + V+ ++NFHLP+S+L+MLVSAF G E ++YQ AI YRFYS+GD L+
Sbjct: 290 YQPKIVEGFITNFHLPRSSLMMLVSAFIGRERLLQLYQQAIDRQYRFYSFGDAMLILP 347
>gi|54297930|ref|YP_124299.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Legionella
pneumophila str. Paris]
gi|81601758|sp|Q5X3P9|QUEA_LEGPA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|53751715|emb|CAH13137.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Legionella
pneumophila str. Paris]
Length = 337
Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats.
Identities = 141/357 (39%), Positives = 205/357 (57%), Gaps = 20/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F FDLP IA P+ R +RL++ + + ++ FL D +V
Sbjct: 1 MNKQDFYFDLPSELIAQYPLANRSDSRLLIYNRQT---EEYGHYQFREIADFLQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N++KVI A+L G + ++ + ++ + + SK +K D+++
Sbjct: 58 MNDSKVIPARLYGHKA-----TGGKVELLVERITGDFTFLAHIKASKSLKSNDLIYL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D RLE V+++ + L + + ++ +G IPLPPYIAR+ ++ D Y
Sbjct: 110 DAGKRLE--VLERQDD----LFLCKASENILDLLNDLGHIPLPPYIARE--DESLDKERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GSVAAPTAGLHF +LS + + G+ + +VTLHVGAGTF PV+ E DH M
Sbjct: 162 QTVYAKCAGSVAAPTAGLHFDDAVLSSIRARGVNIAYVTLHVGAGTFRPVRCERIQDHKM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + KS G R+++VGTT+LR LE+A G + P S T+IFI PG
Sbjct: 222 HSEWFTVSPDLCAAVKAAKSMGNRVIAVGTTALRSLESAA-MGGELIPCSRDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ D L++NFHLP+STL+MLVSAF G +E +YQ AI YRF+SYGD SLL
Sbjct: 281 YQFKVCDGLITNFHLPESTLVMLVSAFIGHQECMALYQEAIDKRYRFFSYGDASLLL 337
>gi|149184807|ref|ZP_01863125.1| Queuosine biosynthesis protein [Erythrobacter sp. SD-21]
gi|148832127|gb|EDL50560.1| Queuosine biosynthesis protein [Erythrobacter sp. SD-21]
Length = 342
Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats.
Identities = 181/358 (50%), Positives = 229/358 (63%), Gaps = 16/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP RIALRP PRD+AR++VV +D V DLPA L+ D +V
Sbjct: 1 MKVDLFDFELPNERIALRPARPRDAARMLVVRG----AEPFADRTVLDLPAMLDPGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI AQL G R E +I TLH RV W + R +K ++ G+I F
Sbjct: 57 FNDTRVIPAQLEGRR------GEAKIGATLHKRVDLRRWQAFIRNAKRLRVGEIATFG-- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A ++ G +L F +E + GT+PLPPYIA KR DA+D DY
Sbjct: 109 ---GGVTALAEERLADGSFILFFEGE-EPVEVLLERAGTMPLPPYIAGKRATDAQDREDY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +AK G+VAAPTA LHFT L+ L GI +TLHVGAGTF+PVK +DT+DH M
Sbjct: 165 QTMFAKEDGAVAAPTAALHFTDRLMGALAERGIGTETLTLHVGAGTFLPVKADDTEDHQM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G I+ TA LN+V++ G R+++VGTTSLRLLE+AT ED +I P++G T+IFITPG
Sbjct: 225 HAEWGRIEQDTADRLNAVRAGGNRVIAVGTTSLRLLESATGEDKVIRPFAGDTDIFITPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y FRA+D LM+NFHLPKSTL MLV A G E + Y HAI+ YRFYSYGD+SLL
Sbjct: 285 YSFRAIDGLMTNFHLPKSTLFMLVGALMGRERMQAAYAHAIATEYRFYSYGDSSLLLP 342
>gi|51102958|gb|AAT96106.1| QueA [Pseudomonas viridiflava]
Length = 354
Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats.
Identities = 145/358 (40%), Positives = 202/358 (56%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP S IA P+ R S+RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFDLPDSLIARHPLAERRSSRLLTLDGVSGA---LAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRSSKSPKPGSSILI--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
EA ++ + + L E+ + VG +PLPPYI RP + D Y
Sbjct: 110 --DGGGEAEMVARHDALFELRFAE----EVLPLLDRVGHMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF L+ + + G++ FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDQPLMEAIAAKGVETTFVTLHVGAGTFQPVRVEQIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + A+ + ++RGGR+++VGTTS+R LE+A DG++ P+SG T+IFI PG
Sbjct: 222 HTEWLEVGQDVVDAVAACRARGGRVIAVGTTSVRSLESAAR-DGVLKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFSYGDAMFITR 338
>gi|119383366|ref|YP_914422.1| queuosine biosynthesis protein [Paracoccus denitrificans PD1222]
gi|119373133|gb|ABL68726.1| Queuosine biosynthesis protein [Paracoccus denitrificans PD1222]
Length = 359
Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats.
Identities = 169/361 (46%), Positives = 223/361 (61%), Gaps = 14/361 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP + IA RP PR SARL++ + I D V DL L S D +V
Sbjct: 9 MKLDDFDFHLPETLIATRPARPRSSARLLLAQGDS-----IRDLHVRDLADLLGSGDLLV 63
Query: 61 FNNTKVITAQLNGVRFCHINRREK--EISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+LNG R + E ++ TL V+ + W A+P + +K G+++ F
Sbjct: 64 LNDTKVIPARLNGTRARQTPQGEAVAKVEVTLLEPVA-HGWKALAKPLRKLKPGEVIRFG 122
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
S L A V + GE+ L F +G + ++ VG +PLPPYIA R D D
Sbjct: 123 SA-----LSAEVAEIAG-GELTLRFDATGEAFDAALAQVGAMPLPPYIAALRAPDEADRQ 176
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LL L + G++ VTLHVGAGTF+PVKVED H
Sbjct: 177 DYQTVWARNSGAVAAPTASLHFDGELLDGLAARGVRFTHVTLHVGAGTFLPVKVEDVTTH 236
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH E G + A A+N+ ++ GGR++ VGTT+LRL+E+A EDG ++P+ G T IFI
Sbjct: 237 KMHGEWGEVTPEAAAAINATRAAGGRVIPVGTTALRLIESAAAEDGTVHPFQGVTEIFIY 296
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGYRFR D LM+NFHLPKSTLLMLVSA G + + +Y+HA+ YRF+SYGD SLL
Sbjct: 297 PGYRFRVTDALMTNFHLPKSTLLMLVSALMGQDRIRGIYRHAVESGYRFFSYGDASLLIP 356
Query: 359 K 359
K
Sbjct: 357 K 357
>gi|103487672|ref|YP_617233.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sphingopyxis alaskensis RB2256]
gi|122984871|sp|Q1GR22|QUEA_SPHAL RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|98977749|gb|ABF53900.1| Queuosine biosynthesis protein [Sphingopyxis alaskensis RB2256]
Length = 351
Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats.
Identities = 182/360 (50%), Positives = 237/360 (65%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRP PRD+AR++VV I D V DLP +L D +V
Sbjct: 1 MRVDAFDFDLPSERIALRPARPRDAARMLVVDAGN-----IVDAGVRDLPQWLRPGDCLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI AQL G+R E +I TLH R+ W + R +K ++ G+ + F S
Sbjct: 56 FNDTRVIPAQLEGLR------GEAKIGATLHKRIDLRRWQAFVRNAKRLRVGETVDFGSG 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A ++ G +L F+ +E + GT+PLPPYIA KR D D DY
Sbjct: 110 -----VAALAEERLADGSFVLAFAGD-EPVELLLERAGTMPLPPYIAGKRGADEADRDDY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTA LHFT LL+ L + GI +TLHVGAGTF+PVK +DTDDH+M
Sbjct: 164 QTMFAREDGAVAAPTAALHFTPELLAALAAAGIATETLTLHVGAGTFLPVKADDTDDHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G I+A TA LN+V++ GGR+++VGTTSLRLLE+A +DG I P++G T+IFITPG
Sbjct: 224 HAEWGRIEADTAARLNAVRASGGRVIAVGTTSLRLLESAARDDGTITPFAGDTSIFITPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRF+A+D LM+NFHLP+STL MLVSA G+E + Y HAI+ YRFYSYGD SLL ++
Sbjct: 284 YRFKAIDGLMTNFHLPRSTLFMLVSALMGLETMQAAYAHAIAREYRFYSYGDASLLLPRQ 343
>gi|268316657|ref|YP_003290376.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Rhodothermus marinus DSM 4252]
gi|262334191|gb|ACY47988.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Rhodothermus marinus DSM 4252]
Length = 348
Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats.
Identities = 137/362 (37%), Positives = 196/362 (54%), Gaps = 19/362 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + + +D P S +A P PRDSARLMV+ I + D+ + N D +V
Sbjct: 1 MRLSDLHYDYPKSLVAKYPAEPRDSARLMVLDRKRRT---IEHRIFRDIVDYFNEGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + +I L ++ S W P++ I+ G+ ++F
Sbjct: 58 VNNTKVFPARLYGRK----EKTGAKIEVLLLRELNAESRLWDALVDPARKIRVGNKIYF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
L A VID + + F G EL ++I VG +PLPPYI KR + D
Sbjct: 113 ----DGGLVAEVIDNTTSRGRTIRFLFDGSDEELYQKIEEVGHMPLPPYI--KREDEPED 166
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT +A+ GSVAAPTAGLHFT L+ RL G+ + +TLHVG GTF P++VED
Sbjct: 167 RERYQTIFAQETGSVAAPTAGLHFTPELVERLKQKGVDIVPITLHVGLGTFRPIEVEDLT 226
Query: 237 DHIMHSEIGFIDAPTAQALNSV-KSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
H M SE I A+ +N S + +VGTT +R LE++ + G + P G+T+
Sbjct: 227 KHRMDSEYFTITEEAAERINRALLSPEHTVTAVGTTVVRALESSISATGTVKPGFGWTDK 286
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI P Y F+ V+ L++NFH+P+STLL LV AF G + + Y+ A+ YR +S+GD L
Sbjct: 287 FIYPPYDFKIVERLITNFHMPRSTLLALVVAFAGYDFVMEAYRTAVQEKYRLFSFGDAML 346
Query: 356 LF 357
+
Sbjct: 347 IL 348
>gi|255693344|ref|ZP_05417019.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
finegoldii DSM 17565]
gi|260620920|gb|EEX43791.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
finegoldii DSM 17565]
Length = 352
Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats.
Identities = 129/363 (35%), Positives = 192/363 (52%), Gaps = 15/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P RD +RLMV+H N I + ++ + + D +
Sbjct: 1 MKLSQFKFKLPEDKIALHPTKYRDESRLMVLHRNTGK---IEHKMFKEVLEYFDDKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK----EKTGARIEVFLLRELNEELRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDARD 176
D + A VID + L F G E ++ + +G PLP I RP++ D
Sbjct: 114 PDD---SMVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYELGETPLPHTII-NRPVEPED 169
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+Q+ +AK +G+V APTA LHF+ L+ RL G+ ++TLH G G F + VED
Sbjct: 170 AERFQSIFAKKEGAVTAPTASLHFSRELMKRLEIKGVDFAYITLHAGLGNFRDIDVEDLT 229
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE F+D + +N K G + +VGTT +R +E+A + DG + + G+TN F
Sbjct: 230 KHKMDSEQMFVDEAAVKTVNRAKDNGKNVCAVGTTVIRAIESAVSTDGHLKEFEGWTNKF 289
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + ++SNFH+P STLLM+V+AF G E+ Y A+ YRF +YGD L+
Sbjct: 290 IFPPYEFTVANSMISNFHMPLSTLLMIVAAFGGYEQVMDAYHVALKEGYRFGTYGDAMLI 349
Query: 357 FQK 359
K
Sbjct: 350 LDK 352
>gi|94311875|ref|YP_585085.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cupriavidus
metallidurans CH34]
gi|166216742|sp|Q1LJ60|QUEA_RALME RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|93355727|gb|ABF09816.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cupriavidus
metallidurans CH34]
Length = 353
Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats.
Identities = 154/363 (42%), Positives = 208/363 (57%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHP----NLSCPLVISDHLVSDLPAFLNSN 56
+ + +FDF LPP IA + R ++RL+VV + S + + D SD+ +LN +
Sbjct: 2 LTLSDFDFPLPPELIAQSALPDRSASRLLVVERTAPEDTSEAVRLVDRAFSDILEYLNPD 61
Query: 57 DAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
D +VFN+T+VI A+ G + I + V ++ R SK +G +LH
Sbjct: 62 DLLVFNDTRVIKARFFGHKPS-----GGRIEVLVERVVDTHTVLAQVRASKTPVEGSLLH 116
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
A + L F ++L I G +PLPPYI DA D
Sbjct: 117 LADDAF-----AVTVGPRVDQFFTLRFPEPALDL---IERYGRLPLPPYITHD--PDAYD 166
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YA+ G+VAAPTAGLHF L +RL + GI+ F+TLHVGAGTF PV+ E+
Sbjct: 167 ETRYQTVYARNPGAVAAPTAGLHFDDALFARLDAAGIRRAFLTLHVGAGTFQPVRTENLS 226
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+H MHSE I A A+ ++RGGR+++VGTTSLR LE+A EDG + SG T+IF
Sbjct: 227 EHKMHSEWYAISPELADAVRETRARGGRVIAVGTTSLRALESAAAEDGTLEAGSGDTDIF 286
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGY FR VD L++NFHLPKSTLLMLVSA G+E + Y+HA+ YRF+SYGD LL
Sbjct: 287 ITPGYAFRIVDALITNFHLPKSTLLMLVSALAGVEAIRDAYRHAVDARYRFFSYGDAMLL 346
Query: 357 FQK 359
++
Sbjct: 347 TRR 349
>gi|297539464|ref|YP_003675233.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylotenera sp. 301]
gi|297258811|gb|ADI30656.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylotenera sp. 301]
Length = 350
Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats.
Identities = 139/362 (38%), Positives = 212/362 (58%), Gaps = 24/362 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F+F LP + IA P R ++R++ ++ + ++D++ +LP L + D +V
Sbjct: 1 MRTEDFNFYLPDALIAQHPTAERTASRMLHLNSSKG---ELADNMFINLPEHLQAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L GV+ + + ++ ++ R S+ K G L
Sbjct: 58 FNDTRVIKARLFGVKH-----TGGSVEVMIERVINQHTAYAQIRASRAPKVGTRLTL--- 109
Query: 121 DGQSRLEATVIDKWNT-GEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ + V + + E+L + S ++L + G +PLPPYI D D
Sbjct: 110 --SNAFDVEVTARHDDLFELLFLSETSVLDL---LEQHGALPLPPYITHSATSD--DEER 162
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT ++K G+VAAPTAGLHF +L L GI + +VTLHVGAGTF PV+V++ ++H
Sbjct: 163 YQTVFSKHLGAVAAPTAGLHFNDAMLDTLKQKGINIAYVTLHVGAGTFQPVRVDNINEHK 222
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-----EDGIINPWSGFTN 294
MHSE+ I T +N+ K+ G ++ ++GTT+LR LE+A +G + +G T+
Sbjct: 223 MHSELYSISQATIDMINATKTNGAKVTAIGTTALRALESAARVTEFNTNGNLQAGNGDTD 282
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFITPGY+F+ VD L +NFHLPKSTLLMLVSAF G++ KK Y+HAI+ YRF+SYGD
Sbjct: 283 IFITPGYQFKVVDRLFTNFHLPKSTLLMLVSAFAGMDNIKKAYEHAINEHYRFFSYGDAM 342
Query: 355 LL 356
L+
Sbjct: 343 LI 344
>gi|302185766|ref|ZP_07262439.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. syringae 642]
Length = 354
Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats.
Identities = 145/358 (40%), Positives = 202/358 (56%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S+RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTLDGPTGA---LAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRSSKSPKPGSSILI--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
EA ++ + + L E+ + VG +PLPPYI RP + D Y
Sbjct: 110 --DGGGEAEMVARHDALFELRFAE----EVLPLLERVGHMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G++AAPTAGLHF LL + + G++ FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAQRAGALAAPTAGLHFDQPLLEAIAAKGVETAFVTLHVGAGTFQPVRVEQIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + ++RGGR+++VGTTS+R LE+A DG++ P+SG T+IFI PG
Sbjct: 222 HSEWLEVGQDVVDAVAACRARGGRVIAVGTTSVRSLESAAR-DGVLKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFSYGDAMFITR 338
>gi|237800018|ref|ZP_04588479.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. oryzae str. 1_6]
gi|331022873|gb|EGI02930.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. oryzae str. 1_6]
Length = 354
Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats.
Identities = 145/358 (40%), Positives = 201/358 (56%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S+RL+ + ++ +DL L S D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTLDGPTGA---LAHRQFTDLLEHLRSGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKTS-----GGKLEILVERVLDSHRVLAHVRSSKSPKPGSSILI--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
E ++ + + L E+ + VG +PLPPYI RP + D Y
Sbjct: 110 --DGGGEVEMVARHDALFELRFAE----EVLPLLDRVGHMPLPPYI--DRPDEGSDRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDQPLLDAIAAKGVETAFVTLHVGAGTFQPVRVEQIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + ++RGGR+++VGTTS+R LE+A DG + P+SG T+IFI PG
Sbjct: 222 HSEWLEVSQDVVDAVAACRARGGRVIAVGTTSVRSLESAAR-DGELKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y A+ H YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAVEHGYRFFSYGDAMFITR 338
>gi|15837915|ref|NP_298603.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xylella
fastidiosa 9a5c]
gi|21263924|sp|Q9PDR5|QUEA_XYLFA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|9106307|gb|AAF84123.1|AE003964_7 S-adenosylmethionine: tRNA ribosyltransferase-isomerase [Xylella
fastidiosa 9a5c]
Length = 347
Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats.
Identities = 144/359 (40%), Positives = 204/359 (56%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +F +DLP IA P+ R ++RLM+V S P D V DLP L D +V
Sbjct: 2 LKKSDFHYDLPEELIAQGPLPERSASRLMLVP---SAPEQFQDCYVRDLPELLQPGDLLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + + V R S+ +K G+ + +
Sbjct: 59 FNDTRVIPARLFGRKVS-----GGRVEILIERFLGTHQAVVQLRTSRSLKVGNRILLDAG 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L G+ L+ LE+ +S VG +PLPPYI R+ D D Y
Sbjct: 114 GHAGVL-------GRDGDFYLLSFDVESPLEQWLSDVGQLPLPPYIHRE--PDEYDRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF +LL+RL + G++ ++TLHVGAGTF PV+V H+M
Sbjct: 165 QTVFARAVGAVAAPTAGLHFDESLLARLRARGVEFGYITLHVGAGTFQPVRVALLQQHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A + + S ++RGGR+++VGTT +R LE+A G + P+ G T IFI PG
Sbjct: 225 HSEWFKVGAELVEQVRSARARGGRVIAVGTTVVRSLESAMRH-GELQPFVGETQIFIFPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
Y R+VD +++NFHLP+STLLMLV+AF G Y HA+ YRF+SYGD LLF +
Sbjct: 284 YCIRSVDAMVTNFHLPESTLLMLVAAFAGRTRILDAYYHAVQQRYRFFSYGDAMLLFPR 342
>gi|323464269|gb|ADX76422.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Staphylococcus pseudintermedius ED99]
Length = 341
Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats.
Identities = 146/357 (40%), Positives = 209/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EFD+ LP S IA P+ RD +RL+ ++ + D D+ F D +V
Sbjct: 1 MNIEEFDYVLPESLIAQTPLKQRDQSRLLYLNRDTGET---EDLHFKDITRFFQPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + ++ + W V +P+K IK G L F
Sbjct: 58 LNDTRVMPARLFGIK----EETNAKVEMLMLTQIEGDDWEVLLKPAKRIKLGQTLSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +++AT I + + G ++ S GI L+ ++ +G +PLPPYI + Y
Sbjct: 111 -GEGKIKATCIKELDQGGRIMRLSYEGI-LQERLDELGEMPLPPYIKERLDE----KERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + G+++ F+TLHVG GTF PV V+ DDH M
Sbjct: 165 QTVYAKAAGSAAAPTAGLHFTDALLDDIRRQGVQIAFITLHVGLGTFRPVSVDHIDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN K+ G RI+SVGTTS R LET T+ SG+TNIFI PG
Sbjct: 225 HSEYYQMSQETADILNQTKAAGHRIISVGTTSTRTLETIRTQFDTFQATSGWTNIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+A+D L++NFHLPKSTL+MLVSAF + Y HA++ YRF+S+GD ++
Sbjct: 285 FEFKAIDGLITNFHLPKSTLVMLVSAFSSRQFVLSAYHHAVAEKYRFFSFGDAMIII 341
>gi|255010308|ref|ZP_05282434.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
fragilis 3_1_12]
gi|313148106|ref|ZP_07810299.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
fragilis 3_1_12]
gi|313136873|gb|EFR54233.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
fragilis 3_1_12]
Length = 352
Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats.
Identities = 128/363 (35%), Positives = 189/363 (52%), Gaps = 15/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P RD +RLMV+H I + D+ + + D V
Sbjct: 1 MKLSQFKFKLPEEKIALHPTKYRDESRLMVLHKRTG---EIEHKMFKDILNYFDDKDVFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK----EKTGARIEVFLLRELNEELRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDARD 176
D + A VID + L F G E ++ + +G PLP I RP++ D
Sbjct: 114 DDD---SMVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYALGETPLPHTIL-NRPVEEED 169
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+Q+ +AK +G+V APTA LHF+ L+ R+ GI ++TLH G G F + VED
Sbjct: 170 AERFQSIFAKNEGAVTAPTASLHFSRELMKRMEIKGIDFAYITLHAGLGNFRDIDVEDLT 229
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE F+ + +N K G + +VGTT +R +E+ + DG + + G+TN F
Sbjct: 230 KHKMDSEQMFVTGEAVKIVNRAKDLGRNVCAVGTTVMRAIESTVSTDGHLKEYEGWTNKF 289
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + ++SNFH+P STLLM+V+AF G E+ Y A+ YRF +YGD L+
Sbjct: 290 IFPPYDFTVANAMVSNFHMPLSTLLMIVAAFGGYEQVMDAYHIALKEGYRFGTYGDAMLI 349
Query: 357 FQK 359
K
Sbjct: 350 LDK 352
>gi|254523176|ref|ZP_05135231.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Stenotrophomonas sp. SKA14]
gi|219720767|gb|EED39292.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Stenotrophomonas sp. SKA14]
Length = 355
Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats.
Identities = 146/359 (40%), Positives = 205/359 (57%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +F++DLP IA P+ R ++RL++V P P +D V DLP+ L D +V
Sbjct: 13 LKKSDFNYDLPAELIAQAPLAERSASRLLLVPP---APAAFTDLQVRDLPSQLQPGDLLV 69
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + SK K G +
Sbjct: 70 FNDTRVIPARLFGQKAS-----GGRVEILIERLLGGQQARAQVGASKSPKAGSRIAL--- 121
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ EA V+ + GE ++ LE+ + G +PLPPYI R+ +D D Y
Sbjct: 122 --DAGGEAEVLGR--DGEFYVLQFHVPESLEQWLLHAGRLPLPPYIQREPGVD--DRERY 175
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF LL+ L G+ VTLHVGAGTF PV+ +D DH+M
Sbjct: 176 QTVFAREVGAVAAPTAGLHFDEPLLAALKDKGVDFGHVTLHVGAGTFQPVRADDLKDHVM 235
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A Q + ++ GGR++ VGTT +R LE+A DG + P++G T IFITPG
Sbjct: 236 HREWLNVGAELVQQVRRTRAAGGRVIGVGTTVVRALESAMR-DGELLPFAGETQIFITPG 294
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YR R+VD +++NFHLP+STLLM++SAF G E + YQHAI YRF+SYGD LLF +
Sbjct: 295 YRIRSVDAMVTNFHLPESTLLMMISAFAGKERVFEAYQHAIEQRYRFFSYGDAMLLFPQ 353
>gi|325915107|ref|ZP_08177433.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
vesicatoria ATCC 35937]
gi|325538629|gb|EGD10299.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
vesicatoria ATCC 35937]
Length = 356
Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats.
Identities = 147/365 (40%), Positives = 211/365 (57%), Gaps = 22/365 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F++ LP IA P+ R ++RL+VV P P SD V DLP L D ++
Sbjct: 1 MKKSDFNYALPEELIAQAPLAERAASRLLVVSP---APAAFSDRQVRDLPELLQPGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + V SK K G ++
Sbjct: 58 FNDTRVIPARLFGQKAS-----GGRVEILIERLLGEREARVQIGASKSPKAGSLIAL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ +A V+ + GE L+ + LE+ + G +PLPPYI R+ ++ D Y
Sbjct: 110 --DAGGQAEVLGR--DGEFYLLRFEIPLPLEQWLPEAGRLPLPPYIRREPGLE--DRERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF +LL+RL GI+ VTLHVGAGTF PV+V+ D H+M
Sbjct: 164 QTVFAREVGAVAAPTAGLHFDEDLLARLRERGIEFGHVTLHVGAGTFQPVRVDALDQHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-----TTEDGIINPWSGFTNI 295
H E + A + + ++RGGR+++VGTT +R LE+A +G + P++G T I
Sbjct: 224 HKEWLNVGAALVEQVRRTRARGGRVIAVGTTVVRSLESAWRTTEAAPEGELLPFAGETQI 283
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGYR R+VD +++NFHLP+STLLM+VSAF G E + YQHAI+ YRF+SYGD L
Sbjct: 284 FILPGYRIRSVDAMVTNFHLPESTLLMMVSAFAGRERIFEAYQHAIAQRYRFFSYGDAML 343
Query: 356 LFQKR 360
L+ +
Sbjct: 344 LWGRE 348
>gi|296107617|ref|YP_003619318.1| S-adenosylmethionine-tRNA ribosyltransferase-isomerase [Legionella
pneumophila 2300/99 Alcoy]
gi|295649519|gb|ADG25366.1| S-adenosylmethionine-tRNA ribosyltransferase-isomerase [Legionella
pneumophila 2300/99 Alcoy]
Length = 337
Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats.
Identities = 141/357 (39%), Positives = 205/357 (57%), Gaps = 20/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F FDLP IA P+ R +RL++ + + ++ FL D +V
Sbjct: 1 MNKQDFYFDLPSELIAQYPLANRSDSRLLIYNRQT---EEYGHYQFREIADFLQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N++KVI A+L G + ++ + ++ + + SK +K D+++
Sbjct: 58 MNDSKVIPARLYGHKA-----TGGKVELLVERITGDFTFLAHIKASKSLKSNDLIYL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D RLE V+++ + L + + ++ +G IPLPPYIAR+ ++ D Y
Sbjct: 110 DAGKRLE--VLERQDD----LFLCKASENILDLLNDLGHIPLPPYIARE--DESLDKERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GSVAAPTAGLHF +LS + + G+ + +VTLHVGAGTF PV+ E DH M
Sbjct: 162 QTVYAKCAGSVAAPTAGLHFDDAVLSSIRARGVNIAYVTLHVGAGTFRPVRCERIQDHKM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + KS G R+++VGTT+LR LE+A G + P S T+IFI PG
Sbjct: 222 HSEWFTVSPDLCSAVKAAKSMGNRVIAVGTTALRSLESAA-MGGELIPCSRDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ D L++NFHLP+STL+MLVSAF G +E +YQ AI YRF+SYGD SLL
Sbjct: 281 YQFKVCDGLITNFHLPESTLVMLVSAFIGHQECMALYQEAIDKRYRFFSYGDASLLL 337
>gi|114764580|ref|ZP_01443784.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pelagibaca
bermudensis HTCC2601]
gi|114542956|gb|EAU45976.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseovarius
sp. HTCC2601]
Length = 349
Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats.
Identities = 165/360 (45%), Positives = 221/360 (61%), Gaps = 13/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RP PR SARL+V + I+D +V DL +L D +V
Sbjct: 1 MHLSDFDFDLPDELIATRPANPRSSARLLVAEGDT-----ITDAVVRDLTQWLRPGDRLV 55
Query: 61 FNNTKVITAQLNG--VRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+L+G R + +I TL W+ +P K +++G+ + F
Sbjct: 56 LNDTKVIPARLSGARTRESAQGVTQAQIEITLLEPRPGGLWAALVKPLKKLREGETVVF- 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
L AT+ + G+ LL F++ G + + ++ G +PLPPYIA KR DA+D
Sbjct: 115 ----SEALSATLEAR-EDGQGLLRFNLEGEDFDAALAEAGAMPLPPYIAAKRAADAQDKT 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF + LL+ L + G+ VTLHVGAGTF+PVKV+D H
Sbjct: 170 DYQTVWAERTGAVAAPTASLHFDAGLLAALEAHGVAFTKVTLHVGAGTFLPVKVDDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH E G + A + + K+ GGR++ VGTT+LRLLETA + G I W G T+IFI
Sbjct: 230 KMHGEWGEVSESAAAEIAATKAAGGRVIPVGTTALRLLETAARDSGAIAAWQGVTDIFIY 289
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ FR D LM+NFHLPKSTL+MLVSA G E +Y+HAIS YRF+SYGD+SLL
Sbjct: 290 PGFAFRVTDALMTNFHLPKSTLMMLVSALMGRERMMGIYEHAISERYRFFSYGDSSLLIP 349
>gi|330997201|ref|ZP_08321054.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Paraprevotella xylaniphila YIT 11841]
gi|329570996|gb|EGG52703.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Paraprevotella xylaniphila YIT 11841]
Length = 353
Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats.
Identities = 126/363 (34%), Positives = 190/363 (52%), Gaps = 16/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDH-LVSDLPAFLNSNDAI 59
M + +F F LP +IA P RD +RLMV+H I D+ + + D
Sbjct: 1 MKLSQFKFKLPEEQIAQYPARHRDESRLMVLHKKSGD---IEHREYFKDILDYFDDKDVF 57
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHF 117
+FN+TKV A+L G + + I L ++ + W V P++ I+ G+ L+F
Sbjct: 58 IFNDTKVFPARLYGNK----EKTGARIEVFLLRELNEDLRLWDVLVDPARKIRIGNKLYF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDAR 175
D + A VID + L F G E + + +G PLP +I KRP +
Sbjct: 114 GEDD---SMVAEVIDNTTSRGRTLRFLYDGPHDEFKAALYALGEAPLPKHIV-KRPAEPE 169
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D +Q +A+ +G+V AP+AGLHF+ L+ RL G+ FVT+H G G F + VED
Sbjct: 170 DMERFQCIFARNEGAVTAPSAGLHFSRELMKRLEIKGVNFAFVTMHCGLGCFRDIDVEDL 229
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
H M SE F+ A + +N+ K G R+ +VGTT R+LETA D + ++G+TN
Sbjct: 230 TKHKMDSEEMFVGADACRIVNTAKEGGHRVCAVGTTVQRVLETAVGTDCNLKEFTGWTNK 289
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI P Y F D +++NF++P ST+LML +A+ G + + Y+ A+ YRF +YGD L
Sbjct: 290 FIFPPYEFGVADCMVANFYMPYSTMLMLTAAYGGYDLVMQGYKEALKEGYRFGTYGDAML 349
Query: 356 LFQ 358
+
Sbjct: 350 ILN 352
>gi|294624102|ref|ZP_06702847.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 11122]
gi|292601602|gb|EFF45594.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
fuscans subsp. aurantifolii str. ICPB 11122]
Length = 464
Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats.
Identities = 143/364 (39%), Positives = 209/364 (57%), Gaps = 22/364 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +F +DLP IA P+ R ++RL+VV P P ++D V DLP L D ++
Sbjct: 109 LKKSDFHYDLPDELIAQAPLAERAASRLLVVPP---SPQALADRQVRDLPELLQPGDLLI 165
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + V SK K G ++
Sbjct: 166 FNDTRVIPARLFGHKAS-----GGRVEILIERLLGERQARVQIGASKSPKAGSLIAL--- 217
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ +A V+ + GE L+ LE + G +PLPPYI R+ ++ D Y
Sbjct: 218 --DAGGQAEVLGR--DGEFYLLRFEIPTPLEHWLLEAGRLPLPPYIRREPGVE--DRERY 271
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF LL+RL G++ VTLHVGAGTF PV+V+ D H+M
Sbjct: 272 QTVFAREVGAVAAPTAGLHFDEPLLARLRERGVEFGHVTLHVGAGTFQPVRVDKLDQHVM 331
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-----TTEDGIINPWSGFTNI 295
H+E + A + + ++RGGR+++VGTT +R LE+A +G + P++G T I
Sbjct: 332 HTEWLNVGAALVEQVRRTRARGGRVIAVGTTVVRSLESAWRTTEAAPEGELQPFAGETQI 391
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGYR R+VD +++NFHLP+STL+M+VSAF G E Y+HAI+ YRF+SYGD L
Sbjct: 392 FILPGYRIRSVDAMVTNFHLPESTLMMMVSAFAGRERIFAAYRHAIAQRYRFFSYGDAML 451
Query: 356 LFQK 359
L+ +
Sbjct: 452 LWGR 455
>gi|148359575|ref|YP_001250782.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase [Legionella
pneumophila str. Corby]
gi|166216730|sp|A5IDI6|QUEA_LEGPC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|148281348|gb|ABQ55436.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase [Legionella
pneumophila str. Corby]
Length = 337
Score = 425 bits (1092), Expect = e-117, Method: Composition-based stats.
Identities = 141/357 (39%), Positives = 204/357 (57%), Gaps = 20/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F FDLP IA P+ R +RL++ + + ++ FL D +V
Sbjct: 1 MNKQDFYFDLPSELIAQYPLANRSDSRLLIYNRQT---EEYGHYQFREIADFLQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N++KVI A+L G + ++ + ++ + + SK +K D ++
Sbjct: 58 MNDSKVIPARLYGHKA-----TGGKVELLVERITGDFTFLAHIKASKSLKSNDFIYL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D RLE V+++ + L + + ++ +G IPLPPYIAR+ ++ D Y
Sbjct: 110 DAGKRLE--VLERQDD----LFLCKASENILDLLNDLGHIPLPPYIARE--DESLDKERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GSVAAPTAGLHF +LS + + G+ + +VTLHVGAGTF PV+ E DH M
Sbjct: 162 QTVYAKCAGSVAAPTAGLHFDDAVLSSIRARGVNIAYVTLHVGAGTFRPVRCERIQDHKM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + KS G R+++VGTT+LR LE+A G + P S T+IFI PG
Sbjct: 222 HSEWFTVSPDLCAAVKAAKSMGNRVIAVGTTALRSLESAA-MGGELIPCSRDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ D L++NFHLP+STL+MLVSAF G +E +YQ AI YRF+SYGD SLL
Sbjct: 281 YQFKVCDGLITNFHLPESTLVMLVSAFIGHQECMALYQEAIDKRYRFFSYGDASLLL 337
>gi|21231816|ref|NP_637733.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
campestris pv. campestris str. ATCC 33913]
gi|66768058|ref|YP_242820.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
campestris pv. campestris str. 8004]
gi|24212184|sp|Q8P867|QUEA_XANCP RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|81305965|sp|Q4UVX3|QUEA_XANC8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|21113530|gb|AAM41657.1| S-adenosylmethionine: tRNA ribosyltransferase-isomerase
[Xanthomonas campestris pv. campestris str. ATCC 33913]
gi|66573390|gb|AAY48800.1| S-adenosylmethionine: tRNA ribosyltransferase-isomerase
[Xanthomonas campestris pv. campestris str. 8004]
Length = 356
Score = 425 bits (1092), Expect = e-117, Method: Composition-based stats.
Identities = 144/365 (39%), Positives = 205/365 (56%), Gaps = 22/365 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R ++RL+VV P P SD V DLP L D ++
Sbjct: 1 MKKSDFHYDLPEELIAQAPLAERAASRLLVVPP---TPAAFSDRQVRDLPELLQPGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + SK K G ++
Sbjct: 58 FNDTRVIPARLFGQKAS-----GGRVEILIERLLGGQQARAQIGASKSPKAGSVIAL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ +A V+ + GE L+ LE + G +PLPPYI R+ +D D Y
Sbjct: 110 --DAGGQAEVLGR--DGEFYLLRFDIPAPLEHWLLDAGRLPLPPYIRREPGLD--DRERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF LL+RL G++ VTLHVGAGTF PV+V+ D H+M
Sbjct: 164 QTVFAREVGAVAAPTAGLHFDEALLARLRERGVEFGHVTLHVGAGTFQPVRVDALDKHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-----DGIINPWSGFTNI 295
H+E + A + + ++RGGR+++VGTT +R LE+A + G + ++G T I
Sbjct: 224 HTEWLNVGAALVEQVRRTRARGGRVIAVGTTVVRSLESAWRKTDDAPHGELQSFAGETQI 283
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGYR R+VD +++NFHLP+STLLM+VSAF G + Y HAI+ YRF+SYGD L
Sbjct: 284 FILPGYRIRSVDAMVTNFHLPESTLLMMVSAFAGCDRIFAAYAHAIAQRYRFFSYGDAML 343
Query: 356 LFQKR 360
L+ +
Sbjct: 344 LWSRE 348
>gi|313158313|gb|EFR57715.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Alistipes
sp. HGB5]
Length = 349
Score = 425 bits (1092), Expect = e-117, Method: Composition-based stats.
Identities = 131/361 (36%), Positives = 194/361 (53%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + ++ ++ P +A P RD +RLMV++ + + D+ + + D V
Sbjct: 1 MKLSQYGYEFAPEMLAKHPTENRDDSRLMVINRAKGT---VEHRIFKDIIEYFDEKDLFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV--SPNSWSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + EI L + W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK----EKTGAEIEIFLLRELNRELRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D L A VID + L F G E ++ + +G PLP ++ K ++ D
Sbjct: 114 DDD---LLVAEVIDNTTSRGRTLRFLFDGSYEEFKQALFSLGETPLPKWVRDK--VEPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT +A+ +G+VAAPTAG+HF+ +L+ R+ GI F+TLHVG G F V VED
Sbjct: 169 AERYQTIFARHEGAVAAPTAGMHFSKHLMKRMEIKGIDKSFITLHVGLGNFRTVDVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE F+ A+A+NS K G +IV++GTT +R +ETA + +G+I P G+TN F
Sbjct: 229 KHKMDSEQFFVTDEAAEAVNSAKRDGHKIVAIGTTVMRTVETAVSTNGMIKPMEGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I Y F D +++NFHLP ST LM+V+AF G E Y+ A YRF +YGD L+
Sbjct: 289 IFAPYEFTVADAMVTNFHLPYSTQLMMVAAFGGYETVMNAYKVAKEEGYRFGTYGDAMLI 348
Query: 357 F 357
Sbjct: 349 L 349
>gi|330807626|ref|YP_004352088.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|327375734|gb|AEA67084.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 349
Score = 425 bits (1092), Expect = e-117, Method: Composition-based stats.
Identities = 143/358 (39%), Positives = 204/358 (56%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R ++RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRASRLLTLDGVSGA---MAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRSSKSPKPGSSILI--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
EA ++ + + L + + E+ + VG +PLPPYI RP + D Y
Sbjct: 110 --DGGGEARMVARHDA---LFELAFA-EEVLPLLDRVGHMPLPPYI--DRPDEGSDRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAERLGAVAAPTAGLHFDQPLLEAIAAKGVETAFVTLHVGAGTFQPVRVERIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + A+ + ++RGGR+V+VGTTS+R LE+A DG++ P+SG T+IFI PG
Sbjct: 222 HNEWLEVSQEVVDAVAACRARGGRVVAVGTTSVRSLESAAR-DGVLKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G E Y+ A+ H YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPEAMAAYKAAVEHGYRFFSYGDAMFITR 338
>gi|78048252|ref|YP_364427.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
campestris pv. vesicatoria str. 85-10]
gi|91207334|sp|Q3BS36|QUEA_XANC5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|78036682|emb|CAJ24373.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase [Xanthomonas
campestris pv. vesicatoria str. 85-10]
Length = 356
Score = 425 bits (1092), Expect = e-117, Method: Composition-based stats.
Identities = 142/362 (39%), Positives = 203/362 (56%), Gaps = 22/362 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F ++LP IA P+ R ++RL+VV P P D V DLP L D ++
Sbjct: 1 MKKSDFHYELPEELIAQAPLAERAASRLLVVPP---APAAFGDRQVRDLPELLQPGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + V SK K G ++
Sbjct: 58 FNDTRVIPARLFGQKAS-----GGRVEILIERLLGEREARVQIGASKSPKAGSVIAL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ +A V+ + GE L+ LE + G +PLPPYI R+ ++ D Y
Sbjct: 110 --DAGGQAEVLGR--DGEFYLLRFQIPTPLEHWLLEAGRLPLPPYIRREPGVE--DRERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF LL+RL G++ VTLHVGAGTF PV+V+ D H+M
Sbjct: 164 QTVFAREVGAVAAPTAGLHFDEPLLARLRERGVEFGHVTLHVGAGTFQPVRVDKLDQHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-----TTEDGIINPWSGFTNI 295
H E + A + + ++RGGR+++VGTT +R LE+A +G + P++G T I
Sbjct: 224 HKEWLNVGATLVEQVRRTRARGGRVIAVGTTVVRSLESAWRKTEAAPEGELQPFAGETQI 283
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGYR R+VD +++NFHLP+STL+M+V AF G E Y HAI+ YRF+SYGD L
Sbjct: 284 FILPGYRIRSVDAMVTNFHLPESTLMMMVCAFAGRERIFAAYHHAIAQRYRFFSYGDAML 343
Query: 356 LF 357
L+
Sbjct: 344 LW 345
>gi|124007246|ref|ZP_01691954.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Microscilla
marina ATCC 23134]
gi|123987276|gb|EAY27005.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Microscilla
marina ATCC 23134]
Length = 350
Score = 425 bits (1092), Expect = e-117, Method: Composition-based stats.
Identities = 130/361 (36%), Positives = 191/361 (52%), Gaps = 15/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EF FD P +AL P RD +RLMV+H + I + D+ + + D V
Sbjct: 1 MKLSEFKFDFPTDLLALHPTDNRDESRLMVIHRDSGK---IEHKVFKDIVDYFDEGDVFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
N+TKV A+L G + + +I L ++ + W V P++ I+ G+ L F
Sbjct: 58 VNDTKVFPARLFGSK----EKTGAQIEVFLLRELNQEAHLWDVLVDPARKIRVGNKLFF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEI--LLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
G L A VID + + S E + I +G PLP +I ++R DA D
Sbjct: 113 ---GNGELVAEVIDNTTSRGRTIRFLTDRSDEEFYQLIDELGETPLPKHIYQQRKTDAHD 169
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+QT +A+ G+VAAPTAGLHFT L+ RL GI + VTLH+G GTF V VED
Sbjct: 170 RERFQTIFAEHVGAVAAPTAGLHFTKQLIKRLELKGIDMTPVTLHIGLGTFRDVDVEDLT 229
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H SE + A T +N + R+ ++GTT ++ LE++ + + ++ +G+++ F
Sbjct: 230 KHKADSENFSVPANTTDKVNDALANKKRVCAIGTTVVKALESSVSANSLLKENAGWSDKF 289
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F+ + L++NFHLP+STLLM AF G E YQ A+ YRF+SYGD L+
Sbjct: 290 IFPPYEFKIPNALVTNFHLPESTLLMTACAFGGYELIMDAYQVAVKEKYRFFSYGDAMLI 349
Query: 357 F 357
Sbjct: 350 L 350
>gi|257452581|ref|ZP_05617880.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. 3_1_5R]
gi|257466440|ref|ZP_05630751.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium gonidiaformans ATCC 25563]
gi|315917596|ref|ZP_07913836.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium gonidiaformans ATCC 25563]
gi|317059121|ref|ZP_07923606.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. 3_1_5R]
gi|313684797|gb|EFS21632.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. 3_1_5R]
gi|313691471|gb|EFS28306.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium gonidiaformans ATCC 25563]
Length = 343
Score = 425 bits (1092), Expect = e-117, Method: Composition-based stats.
Identities = 144/356 (40%), Positives = 200/356 (56%), Gaps = 16/356 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ ++D+ LP I P PRD A+L++V+ + I D D+ +L D +V
Sbjct: 4 KLHDYDYHLPEELIGQTPREPRDHAKLLLVNRDTKT---IEDKYFYDILDYLQKGDVLVR 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKVI A+L G + + L R ++W +P+K +K G ++
Sbjct: 61 NSTKVIPARLYGQKE-----TGGILEVLLVKRKDLDTWECLLKPAKKLKLGQKIYIGP-- 113
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
S L A +++ G +L FS G E + +GT+PLPPYI K D YQ
Sbjct: 114 -NSELVAELLEIQEDGNRILKFSYEG-SFEENLDRLGTMPLPPYIVEK----LEDQEMYQ 167
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YAK SVAAPTAGLHFT LL ++ GI++ + L VG GTF PV+ ED DH MH
Sbjct: 168 TVYAKRGESVAAPTAGLHFTEELLQKIQEKGIEIVDIYLEVGLGTFRPVQTEDVLDHKMH 227
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E+ I AQ +N K+ G RI+SVGTT+ R LE++ E+GI+ T IFI PGY
Sbjct: 228 EELFEIPEEAAQKINQAKAEGRRIISVGTTTTRALESSVDENGILLAQKKNTGIFIYPGY 287
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F+ VD L++NFHLPKSTLLMLVSAF E ++YQHA+ Y F+S+GD ++
Sbjct: 288 QFQIVDALITNFHLPKSTLLMLVSAFSEREFILEIYQHAVEEKYHFFSFGDAMFIY 343
>gi|153807129|ref|ZP_01959797.1| hypothetical protein BACCAC_01406 [Bacteroides caccae ATCC 43185]
gi|149130249|gb|EDM21459.1| hypothetical protein BACCAC_01406 [Bacteroides caccae ATCC 43185]
Length = 352
Score = 425 bits (1092), Expect = e-117, Method: Composition-based stats.
Identities = 130/363 (35%), Positives = 191/363 (52%), Gaps = 15/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P RD +RLMV+H N I + D+ + + D +
Sbjct: 1 MKLSQFKFKLPEDKIALHPTKYRDESRLMVLHRNTGK---IEHRMFKDVLDYFDDKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK----EKTGARIEVFLLRELNEELRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDARD 176
D + A VID + L F G E ++ + +G PLP I RP++ D
Sbjct: 114 PDD---SMVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYALGETPLPHSII-NRPVEPED 169
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+Q+ +AK +G+V APTA LHF+ L+ RL GI ++TLH G G F + VED
Sbjct: 170 AERFQSIFAKKEGAVTAPTASLHFSRELMKRLEIKGIDFAYITLHAGLGNFRDIDVEDLT 229
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE +D + +N K G + +VGTT +R +E+A + DG + + G+TN F
Sbjct: 230 KHKMDSEQMLVDEAAVKTVNRAKDTGRNVCAVGTTVMRAIESAVSTDGHLKEFEGWTNKF 289
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + ++SNFH+P STLLM+V+AF G E+ Y A+ YRF +YGD L+
Sbjct: 290 IFPPYEFTVANSMISNFHMPLSTLLMIVAAFGGYEQVMDAYHVALKEGYRFGTYGDAMLI 349
Query: 357 FQK 359
K
Sbjct: 350 LDK 352
>gi|308272819|emb|CBX29423.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase [uncultured
Desulfobacterium sp.]
Length = 357
Score = 425 bits (1092), Expect = e-117, Method: Composition-based stats.
Identities = 144/361 (39%), Positives = 206/361 (57%), Gaps = 15/361 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ ++D++L +IA +P RD++RLMV+ N + S++ F++ D IV
Sbjct: 5 LLSDYDYELSEDQIAQKPASCRDASRLMVLDKNTGST---FHNKFSEICDFISPKDIIVI 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSW----SVYARPSKVIKKGDILHF 117
NNTKVI +L G + + T +R + + SK K+G ++ F
Sbjct: 62 NNTKVIPGRLFGKKETGGKAEILILDFTGGIREQDKTGDFICECLVKTSKPAKQGSLILF 121
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR-- 175
+ L A V++ G LL FS S E + +G +PLPPYI R + +
Sbjct: 122 -----EENLTAKVLNDVKDGICLLKFSSS-ENFEEILLRIGKMPLPPYIKRDKDNNKSID 175
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D YQT YA G+VAAPTAGLHFT LL ++ + G K +TLHVG GTF+PV+V D
Sbjct: 176 DKTSYQTVYASYSGAVAAPTAGLHFTRELLEKIKAKGTKTAEITLHVGYGTFLPVRVSDI 235
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+H +HSE I A+A+N+V++ GG+I++VGTT +R LE A+ G + SG ++
Sbjct: 236 REHEIHSERYDISFEAAEAINTVRADGGKIIAVGTTCIRTLEYASDHKGRVLSGSGKCDL 295
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGY F+ VD +++NFHLP+STLLMLVSAF G E Y+ AIS YRFYSYGD
Sbjct: 296 FIYPGYSFKVVDSIITNFHLPRSTLLMLVSAFAGRERILSAYKEAISQGYRFYSYGDAMF 355
Query: 356 L 356
+
Sbjct: 356 I 356
>gi|325927082|ref|ZP_08188352.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
perforans 91-118]
gi|325542581|gb|EGD14053.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
perforans 91-118]
Length = 356
Score = 424 bits (1091), Expect = e-117, Method: Composition-based stats.
Identities = 142/362 (39%), Positives = 204/362 (56%), Gaps = 22/362 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F ++LP IA P+ R ++RL+VV P P D V DLP L D ++
Sbjct: 1 MKKSDFHYELPEELIAQAPLAERAASRLLVVPP---APAAFGDRQVRDLPELLQPGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + V SK K G ++
Sbjct: 58 FNDTRVIPARLFGQKAS-----GGRVEILIERLLGEREARVQIGASKSPKAGSVIAL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ +A V+ + GE L+ LE + G +PLPPYI R+ ++ D Y
Sbjct: 110 --DAGGQAEVLGR--DGEFYLLRFQIPTPLEHWLLEAGRLPLPPYIRREPGVE--DRERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF LL+RL G++ VTLHVGAGTF PV+V+ D H+M
Sbjct: 164 QTVFAREVGAVAAPTAGLHFDEPLLARLRERGVEFGHVTLHVGAGTFQPVRVDKLDQHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-----TTEDGIINPWSGFTNI 295
H+E + A + + ++RGGR+++VGTT +R LE+A +G + P++G T I
Sbjct: 224 HTEWLNVGAALVEQVRRTRARGGRVIAVGTTVVRSLESAWRKTEAAPEGELQPFAGETQI 283
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGYR R+VD +++NFHLP+STL+M+V AF G E Y HAI+ YRF+SYGD L
Sbjct: 284 FILPGYRIRSVDAMVTNFHLPESTLMMMVCAFAGRERIFAAYHHAIAQRYRFFSYGDAML 343
Query: 356 LF 357
L+
Sbjct: 344 LW 345
>gi|51102921|gb|AAT96070.1| QueA [Pseudomonas viridiflava]
Length = 354
Score = 424 bits (1091), Expect = e-117, Method: Composition-based stats.
Identities = 146/358 (40%), Positives = 202/358 (56%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP S IA P+ R S+RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFDLPDSLIARHPLAERRSSRLLTLDGVSGA---LAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRSSKSPKPGSSILI--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
EA ++ + + L E+ + VG +PLPPYI RP + D Y
Sbjct: 110 --DGGGEAEMVARHDALFELRFAE----EVLPLLDRVGHMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAERAGAVAAPTAGLHFDQPLLEAIAAKGVETTFVTLHVGAGTFQPVRVEQIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + A+ + ++RGGR+++VGTTS+R LE+A DG++ P+SG T+IFI PG
Sbjct: 222 HTEWLEVGQDVVDAVAACRARGGRVIAVGTTSVRSLESAAR-DGVLKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFSYGDAMFITR 338
>gi|307610728|emb|CBX00335.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Legionella
pneumophila 130b]
Length = 337
Score = 424 bits (1091), Expect = e-117, Method: Composition-based stats.
Identities = 140/357 (39%), Positives = 203/357 (56%), Gaps = 20/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F FDLP IA P+ R +RL++ + + ++ FL D +V
Sbjct: 1 MNKQDFYFDLPSELIAQYPLANRSDSRLLIYNRQT---EEYGHYQFREIADFLQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N++KVI A+L G + ++ + ++ + + SK +K D+++
Sbjct: 58 MNDSKVIPARLYGHKA-----TGGKVELLVERITGDFTFLAHIKASKSLKSNDLIYL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D RLE V+ + + L + + ++ +G IPLPPYI R ++ D Y
Sbjct: 110 DAAKRLE--VLQRQDD----LFLCKASENILDLLNDLGHIPLPPYI--DREDESLDKERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GSVAAPTAGLHF +LS + + G+ + +VTLHVGAGTF PV+ E DH M
Sbjct: 162 QTVYAKCAGSVAAPTAGLHFDDAVLSSIRARGVNIAYVTLHVGAGTFRPVRCERIQDHKM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + KS G R+++VGTT+LR LE+A G + P S T+IFI PG
Sbjct: 222 HSEWFTVSPDLCTAVKAAKSMGNRVIAVGTTALRSLESAA-MGGELIPCSRDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ D L++NFHLP+STL+MLVSAF G +E +YQ AI+ YRF+SYGD SLL
Sbjct: 281 YQFKVCDGLITNFHLPESTLVMLVSAFIGHQECMALYQEAIAKRYRFFSYGDASLLL 337
>gi|147669366|ref|YP_001214184.1| queuosine biosynthesis protein [Dehalococcoides sp. BAV1]
gi|189038519|sp|A5FR63|QUEA_DEHSB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|146270314|gb|ABQ17306.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Dehalococcoides sp. BAV1]
Length = 343
Score = 424 bits (1091), Expect = e-117, Method: Composition-based stats.
Identities = 138/359 (38%), Positives = 199/359 (55%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD++LP IA +P PRDS+RL+V++ +++ + ++ + D +V
Sbjct: 1 MKTSDFDYNLPQEYIAQKPAEPRDSSRLLVLNRQS---EELTNRIFGEITDYFKPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+++V+ A++ G++ +I L R W +PSK K G I+
Sbjct: 58 MNDSRVLPARIKGIK----QDTSAKIEILLLKRDGEGCWEALLKPSKRTKPGTIIDIHQP 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+G +A V+ + LL FS E + +G +PLPPYI D Y
Sbjct: 114 NGGISTQAKVLADKDDSIKLLRFSD-----ETHLMKLGEVPLPPYIHTPVA----DPERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA GSVAAPTAGLHFT LL RL +G+ +VTLH+G TF PVK ED DH +
Sbjct: 165 QTVYALTNGSVAAPTAGLHFTPELLKRLTEMGVICTYVTLHIGLDTFRPVKEEDPKDHKI 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
H E G + TA A+ K G R+ VGT++ RL+E A+ ++ +I +SG+ ++FI
Sbjct: 225 HREYGILSKETASAICCAKETGKRVFCVGTSATRLVEQASHLSQTSLITSYSGWADLFIL 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+FR D ++NFHLP+ST LML SAF G +K Y+ AIS YRFYS+GD L+
Sbjct: 285 PGYKFRVADCFITNFHLPRSTPLMLTSAFAGWPFLRKAYEKAISEHYRFYSFGDAMLIL 343
>gi|54294901|ref|YP_127316.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Legionella
pneumophila str. Lens]
gi|81601277|sp|Q5WV37|QUEA_LEGPL RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|53754733|emb|CAH16220.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Legionella
pneumophila str. Lens]
Length = 337
Score = 424 bits (1091), Expect = e-117, Method: Composition-based stats.
Identities = 139/357 (38%), Positives = 202/357 (56%), Gaps = 20/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F FDLP IA P+ R +RL++ + + ++ FL D +V
Sbjct: 1 MNKQDFYFDLPSELIAQYPLANRSDSRLLIYNRQT---EEYGHYQFREIADFLQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N++KVI A+L G + ++ + ++ + + SK +K D+++
Sbjct: 58 MNDSKVIPARLYGHKA-----TGGKVELLVERITGDFTFLAHIKASKSLKSNDLIYL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D RLE V+ + + L + + ++ +G IPLPPYI R ++ D Y
Sbjct: 110 DAGKRLE--VLQRQDD----LFLCKASENILDLLNDLGHIPLPPYI--DREDESLDKERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GSVAAPTAGLHF +LS + + G+ + ++TLHVGAGTF PV+ E DH M
Sbjct: 162 QTVYAKCAGSVAAPTAGLHFDEAVLSSIRARGVNIAYITLHVGAGTFRPVRCERIQDHKM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + KS G R+++VGTT+LR LE+A G + P S T+IFI PG
Sbjct: 222 HSEWFTVSPDLCTAVKAAKSMGNRVIAVGTTALRSLESAA-MGGELIPCSRDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ D L++NFHLP+STL+MLVSAF G +E +YQ AI YRF+SYGD SLL
Sbjct: 281 YQFKVCDGLITNFHLPESTLVMLVSAFIGHQECMALYQEAIDKRYRFFSYGDASLLL 337
>gi|194290672|ref|YP_002006579.1| s-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cupriavidus
taiwanensis LMG 19424]
gi|238692773|sp|B3R6J3|QUEA_CUPTR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|193224507|emb|CAQ70518.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cupriavidus
taiwanensis LMG 19424]
Length = 355
Score = 424 bits (1091), Expect = e-117, Method: Composition-based stats.
Identities = 149/363 (41%), Positives = 209/363 (57%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHP----NLSCPLVISDHLVSDLPAFLNSN 56
+ + +FDF LPP IA + R ++RL+VV + + + ++D SD+ +L +
Sbjct: 2 LTLSDFDFPLPPELIAQSALPDRSASRLLVVERLAPGDTADAVHMADRAFSDIVDYLRPD 61
Query: 57 DAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
D +VFN+T+VI A+ G + ++ + + ++ R SK +G LH
Sbjct: 62 DLLVFNDTRVIKARFFGHKPS-----GGKVEVLVERVLDTHTVLAQVRASKTPVEGSALH 116
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
A + L F ++L I G +PLPPYI DA D
Sbjct: 117 LADDAF-----AVTVGPRVDQFFTLRFPEPALDL---IERYGRLPLPPYITHD--PDAYD 166
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YA+ G+VAAPTAGLHF L +RL + G++ F+TLHVGAGTF PV+ E+
Sbjct: 167 ETRYQTVYARSPGAVAAPTAGLHFDDALFARLDAAGVRRAFLTLHVGAGTFQPVRTENLA 226
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+H MHSE I AQA+ ++RGGR+++VGTTSLR LE+A DG + SG T+IF
Sbjct: 227 EHKMHSEWYAISEDLAQAVRETRARGGRVIAVGTTSLRALESAAQPDGTLAAGSGDTDIF 286
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFR VD L++NFHLPKSTLLMLVSA G++ + Y+HA+ YRF+SYGD LL
Sbjct: 287 ITPGYRFRLVDALITNFHLPKSTLLMLVSALAGVQAIRAAYRHAVEQRYRFFSYGDAMLL 346
Query: 357 FQK 359
++
Sbjct: 347 TRQ 349
>gi|190573977|ref|YP_001971822.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Stenotrophomonas maltophilia K279a]
gi|190011899|emb|CAQ45520.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Stenotrophomonas maltophilia K279a]
Length = 355
Score = 424 bits (1091), Expect = e-116, Method: Composition-based stats.
Identities = 145/359 (40%), Positives = 205/359 (57%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +F +DLP IA P+ R ++RL++V P P +D V DLP+ L D +V
Sbjct: 13 LKKSDFHYDLPAELIAQAPLAERSASRLLLVPP---APDAFTDLQVRDLPSLLQPGDLLV 69
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + SK K G +
Sbjct: 70 FNDTRVIPARLFGQKAS-----GGRVEILIERLLGGQQARAQVGASKSPKAGSRIAL--- 121
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ EA V+ + GE ++ LE+ + G +PLPPYI R+ +D D Y
Sbjct: 122 --DAGGEAEVLGR--DGEFYVLQFHVPESLEQWLLHAGRLPLPPYIQREPGVD--DRERY 175
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF LL+ L G++ VTLHVGAGTF PV+ +D DH+M
Sbjct: 176 QTVFAREVGAVAAPTAGLHFDEPLLAALKDKGVEFGHVTLHVGAGTFQPVRADDLKDHVM 235
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A Q + ++ GGR++ VGTT +R LE+A DG + P++G T IFITPG
Sbjct: 236 HREWLNVGAELVQQVRRTRAAGGRVIGVGTTVVRALESAMR-DGELLPFAGETQIFITPG 294
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YR R+VD +++NFHLP+STLLM++SAF G E + Y+HAI YRF+SYGD LLF +
Sbjct: 295 YRIRSVDAMVTNFHLPESTLLMMISAFAGKERVFEAYRHAIEQRYRFFSYGDAMLLFPQ 353
>gi|189460198|ref|ZP_03008983.1| hypothetical protein BACCOP_00835 [Bacteroides coprocola DSM 17136]
gi|189433059|gb|EDV02044.1| hypothetical protein BACCOP_00835 [Bacteroides coprocola DSM 17136]
Length = 351
Score = 424 bits (1091), Expect = e-116, Method: Composition-based stats.
Identities = 130/363 (35%), Positives = 190/363 (52%), Gaps = 16/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P RD +RLMVVH I + D+ + + D +
Sbjct: 1 MKLSQFKFKLPEDKIALHPAKYRDESRLMVVHKATG---EIEHVVFKDILNYFDDKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK----EKTGARIEVFLLRELNEELRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDARD 176
D + A VID + L F G E ++ + +G PLPP+I RP + D
Sbjct: 114 DDD---SMVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYALGEPPLPPFIH--RPAEPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+QT +AK +G+V P AGLHF+ L+ R+ GI F+T+H G G F + VED
Sbjct: 169 EERFQTIFAKNEGAVTVPAAGLHFSRELMKRMEIKGIDFSFITMHCGLGGFRDIDVEDLT 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE F++A + +N K RG ++ +VGT +R +ETA DG + + G+TN F
Sbjct: 229 KHKMDSEQMFVEAEACRIVNEAKDRGNKVCAVGTDVMRAIETAVGTDGHLKEFEGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + ++SNFH+P ST+LMLV ++ G E Y A+ YRF +YGD L+
Sbjct: 289 IFPPYDFSLANAMVSNFHMPLSTMLMLVCSYGGYELVMDAYNIALKEDYRFGTYGDAMLI 348
Query: 357 FQK 359
K
Sbjct: 349 LDK 351
>gi|254428367|ref|ZP_05042074.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Alcanivorax
sp. DG881]
gi|196194536|gb|EDX89495.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Alcanivorax
sp. DG881]
Length = 363
Score = 424 bits (1091), Expect = e-116, Method: Composition-based stats.
Identities = 145/358 (40%), Positives = 199/358 (55%), Gaps = 22/358 (6%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
V +FDF+LP IA P R ARL+ + + + DL + ++ D ++F
Sbjct: 7 NVDDFDFELPDGLIARHPPAERRDARLLALTRD-----ALLHQQFPDLLSHVHPGDLLIF 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+VI A+L G + ++ + V + + R SK K G L F
Sbjct: 62 NDTRVIPARLFGQKES-----GGKVEVLIERVVDDHEALAHVRASKSPKPGSWLEF---- 112
Query: 122 GQSRLEATVIDKWNTGEILLVFSISG---IELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ A V + + +L FS+ G L + +G +PLPPYI RP + D
Sbjct: 113 -DEGIRAQVTGRRDA-LFILQFSLPGQGCDTLLTALEKIGHVPLPPYI--DRPDEDGDME 168
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YA+ G+VAAPTAGLHF +L+ L G+ + FVTLHVGAGTF PV+V+ +DH
Sbjct: 169 RYQTVYAREPGAVAAPTAGLHFDDAMLAALEQHGVDIGFVTLHVGAGTFQPVRVDKVEDH 228
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE I + + +RGGR+V+VGTT+LR LE A ++ G + G T+IFI
Sbjct: 229 HMHSERYQIPDSLVEQVAQAHARGGRVVAVGTTALRALEAA-SQSGGLQTGQGETDIFIY 287
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGYRFR VD L++NFHLPKSTLLML+SAF G + YQ AI YRF+SYGD +
Sbjct: 288 PGYRFRLVDALVTNFHLPKSTLLMLISAFAGRDRVMNAYQAAIESQYRFFSYGDAMFI 345
>gi|163792636|ref|ZP_02186613.1| Queuosine biosynthesis protein [alpha proteobacterium BAL199]
gi|159182341|gb|EDP66850.1| Queuosine biosynthesis protein [alpha proteobacterium BAL199]
Length = 349
Score = 424 bits (1090), Expect = e-116, Method: Composition-based stats.
Identities = 169/363 (46%), Positives = 226/363 (62%), Gaps = 20/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FD+ LP RIA P PRD+ARL+ + + ++D ++DLP L D ++
Sbjct: 1 MRVDLFDYHLPEERIARFPANPRDTARLLDLTGDR-----LADRTIADLPDLLQPGDLLI 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L+G R E ++ TLH R W +ARP+K ++ GD + F
Sbjct: 56 ANDTRVIPARLDGKR------GEAKVEVTLHKRDGDAVWRAFARPAKKLRPGDRITFAQD 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A V K GE+ L F +G L ++ G +PLPPYI R+ D DY
Sbjct: 110 -----LTAEVTAKGEAGEVTLSFDTAGPALMEALAAYGRMPLPPYIKRQADEIQDDARDY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A G+VAAPTAGLHFT LL+R+ + G++ VTLHVGAGTF+PVKV+DT DH+M
Sbjct: 165 QTVFAARDGAVAAPTAGLHFTPELLARIEARGVRRALVTLHVGAGTFLPVKVDDTADHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE----DGIINPWSGFTNIF 296
HSE G + + TA A+ ++ GGR+V+ GTT+LR+LE A D + WSG T++F
Sbjct: 225 HSEWGSVPSETAAAVAETRAAGGRVVATGTTTLRILEAAAQTTAPGDDAVPAWSGETDLF 284
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFRAVD+L++NFHLP+STLLMLVSAF G E Y HAI YRF+SYGD LL
Sbjct: 285 ITPGYRFRAVDLLLTNFHLPRSTLLMLVSAFSGRERILAAYDHAIRTGYRFFSYGDACLL 344
Query: 357 FQK 359
++
Sbjct: 345 ARE 347
>gi|73542492|ref|YP_297012.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ralstonia
eutropha JMP134]
gi|91207398|sp|Q46XG5|QUEA_RALEJ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|72119905|gb|AAZ62168.1| Queuosine biosynthesis protein [Ralstonia eutropha JMP134]
Length = 349
Score = 424 bits (1090), Expect = e-116, Method: Composition-based stats.
Identities = 147/363 (40%), Positives = 204/363 (56%), Gaps = 19/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHP----NLSCPLVISDHLVSDLPAFLNSN 56
+ + +FDF LPP IA + R ++RL+VV + + D SD+ +L
Sbjct: 2 LTLSDFDFPLPPELIAQSALPDRSASRLLVVERLAPGEQPDAIRLVDRAFSDIIGYLKPE 61
Query: 57 DAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
D +VFN+T+VI A+ G + ++ + + ++ R SK +G +LH
Sbjct: 62 DLLVFNDTRVIKARFFGQKPS-----GGKVEVLVERVLDTHTVLAQVRASKTPAEGSLLH 116
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
A + L F ++L I G +PLPPYI DA D
Sbjct: 117 LAEDAF-----AVTVGPRVDQFFTLRFPAPALDL---IEQYGRLPLPPYITHD--PDAYD 166
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YA+ G+VAAPTAGLHF L +RL + G++ F+TLHVGAGTF PV+ E+
Sbjct: 167 ETRYQTVYARNPGAVAAPTAGLHFDDALFARLDAAGVRRAFLTLHVGAGTFQPVRTENIA 226
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+H MHSE I A A+ + RGGR+++VGTTSLR LE+A DG + +G T+IF
Sbjct: 227 EHKMHSEWYAISPELADAVRETRKRGGRVIAVGTTSLRALESAAKPDGTLEAGNGDTDIF 286
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGY+FR VD L++NFHLPKSTLLMLVSA G+E + Y+HA+ YRF+SYGD LL
Sbjct: 287 ITPGYQFRLVDALITNFHLPKSTLLMLVSALAGVEAIRAAYRHAVEARYRFFSYGDAMLL 346
Query: 357 FQK 359
++
Sbjct: 347 TRQ 349
>gi|66044475|ref|YP_234316.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. syringae B728a]
gi|76803813|sp|Q9L6W2|QUEA_PSEU2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|63255182|gb|AAY36278.1| Queuosine biosynthesis protein [Pseudomonas syringae pv. syringae
B728a]
Length = 354
Score = 424 bits (1090), Expect = e-116, Method: Composition-based stats.
Identities = 145/358 (40%), Positives = 200/358 (55%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S+RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTLDGPTGA---LAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRSSKSPKPGSSILI--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
EA ++ + + L E+ + VG +PLPPYI RP + D Y
Sbjct: 110 --DGGGEAEMVARHDALFELRFAE----EVLPLLERVGRMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDQPLLEAIAAKGVETAFVTLHVGAGTFQPVRVEQIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + ++RGGR+++VGTTS+R LE+A DG + +SG T+IFI PG
Sbjct: 222 HSEWLEVGQDVVDAVAACRARGGRVIAVGTTSVRSLESAAR-DGELKSFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFSYGDAMFITR 338
>gi|51102892|gb|AAT96042.1| QueA [Pseudomonas viridiflava]
Length = 354
Score = 424 bits (1090), Expect = e-116, Method: Composition-based stats.
Identities = 145/358 (40%), Positives = 202/358 (56%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S+RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTLDGVSGA---LAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRSSKSPKPGSSILI--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
EA ++ + + L E+ + VG +PLPPYI RP + D Y
Sbjct: 110 --DGGGEAEMVARHDALFELRFAE----EVLPLLDRVGHMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAERAGAVAAPTAGLHFDQPLLEAIAAKGVETTFVTLHVGAGTFQPVRVEQIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + A+ + ++RGGR+++VGTTS+R LE+A DG++ P+SG T+IFI PG
Sbjct: 222 HTEWLEVGQDVVDAVAACRARGGRVIAVGTTSVRSLESAAR-DGVLKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFSYGDAMFITR 338
>gi|320322942|gb|EFW79032.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. glycinea str. B076]
gi|320329935|gb|EFW85923.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. glycinea str. race 4]
Length = 354
Score = 423 bits (1089), Expect = e-116, Method: Composition-based stats.
Identities = 145/358 (40%), Positives = 199/358 (55%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S+RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLVERRSSRLLTLDGPTGA---LAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVQDSHRVLAHVRSSKSPKPGSSILI--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
EA ++ + + L E+ + VG +PLPPYI RP + D Y
Sbjct: 110 --DGGGEAEMVARHDALFELRFAE----EVLPLLERVGHMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDQPLLEAIAAKGVETAFVTLHVGAGTFQPVRVEQIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + ++RGGR+++VGTTS+R LE+A DG + +SG T+IFI PG
Sbjct: 222 HSEWLEVGQDVVDAVAACRARGGRVIAVGTTSVRSLESAAR-DGELKSFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFSYGDAMFITR 338
>gi|148552954|ref|YP_001260536.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sphingomonas wittichii RW1]
gi|166218743|sp|A5V282|QUEA_SPHWW RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|148498144|gb|ABQ66398.1| Queuosine biosynthesis protein [Sphingomonas wittichii RW1]
Length = 344
Score = 423 bits (1089), Expect = e-116, Method: Composition-based stats.
Identities = 188/358 (52%), Positives = 235/358 (65%), Gaps = 15/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLPP IALRP PRDSAR+++V + ++D VSDLP L D +V
Sbjct: 1 MRVDLFDFDLPPENIALRPASPRDSARMLLVEGSEGA---LADRHVSDLPGLLRVGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI AQL G R E I TLH R W + R +K ++ GD + F +
Sbjct: 58 FNDTRVIPAQLEGRR------GEARIGATLHKREGLRQWRAFVRNAKRVRTGDRIDFGAG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A ++ G ILL F +E + GT+PLPPYIA KRP D RD DY
Sbjct: 112 -----VSAIAAERGEDGSILLDFEGD-EPVELLLERAGTMPLPPYIAGKRPTDDRDRDDY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +G+VAAPTA LHFT L+ L + GI +TLHVGAGTF+PVK +DTDDH M
Sbjct: 166 QTMFAREKGAVAAPTAALHFTPRLMEALAAAGIASETLTLHVGAGTFLPVKADDTDDHRM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G IDA TA LN++++ GGR+++VGTTSLRLLE+AT EDG+I P+ G T IFITPG
Sbjct: 226 HAEWGRIDAATADHLNAIRAAGGRVIAVGTTSLRLLESATGEDGVIRPFDGDTAIFITPG 285
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRFRA+D LM+NFHLPKSTL MLVSA G + + Y HAI+ YRFYSYGD+SLL
Sbjct: 286 YRFRAIDGLMTNFHLPKSTLFMLVSALMGRDRMQAAYAHAIAEGYRFYSYGDSSLLLP 343
>gi|297172494|gb|ADI23466.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [uncultured nuHF1 cluster bacterium
HF0770_35I22]
Length = 349
Score = 423 bits (1089), Expect = e-116, Method: Composition-based stats.
Identities = 164/361 (45%), Positives = 226/361 (62%), Gaps = 14/361 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M FDF LPP IA +P PR+SA+L+ V + D + DLPA L + D +V
Sbjct: 1 MKTSNFDFSLPPELIAQKPARPRESAKLLQVFSD----GNFRDVYIKDLPALLKAGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI AQL+G F EK++ LH + S W +A+P+K + D + F
Sbjct: 57 VNNTRVIPAQLSGKIFS----TEKKVRVNLHKQKSNGVWLAFAKPAKKLLLNDKIFF--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
S A + DK G+I L F++ G + + G++PLPPYI R + D DY
Sbjct: 110 --SSTFFALITDKQPFGQITLKFNLVGATFLKALKKFGSMPLPPYIKRSGKVHPSDKTDY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QTT+A G+VA+PTAGLHF+ NL++ L GI+V +TLHVGAGTF+P+K + + H M
Sbjct: 168 QTTFASRDGAVASPTAGLHFSMNLINDLKRCGIRVAPITLHVGAGTFLPIKTDTINHHRM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I+A TA +N + GG+I++VGTT LR LETA +G I+P+ G T+IFI PG
Sbjct: 228 HSEWVEINARTANLINKTRKAGGKIIAVGTTVLRTLETAVDTEGNIHPFKGKTDIFIAPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL-FQK 359
++F+ VD+L++NFHLPKSTL +LVSAFCG+ K Y++AI YRF+SYGD SLL +K
Sbjct: 288 HQFKTVDLLITNFHLPKSTLFVLVSAFCGLNRMKNAYKYAIKKKYRFFSYGDASLLELRK 347
Query: 360 R 360
+
Sbjct: 348 K 348
>gi|330894474|gb|EGH27135.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. mori str. 301020]
Length = 354
Score = 423 bits (1089), Expect = e-116, Method: Composition-based stats.
Identities = 145/358 (40%), Positives = 199/358 (55%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S+RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTLDGPTGA---LAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRSSKSPKPGSSILI--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
EA ++ + + L E+ + VG +PLPPYI RP + D Y
Sbjct: 110 --DGGGEAEMVARHDALFELRFAE----EVLPLLERVGHMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF V+VE +DH M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDQPLLEAIAAKGVETAFVTLHVGAGTFQTVRVEQIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + ++RGGR ++VGTTS+R LE+A DG + P+SG T+IFI PG
Sbjct: 222 HSEWLEVGQDVVDAVAACRARGGRGIAVGTTSVRSLESAAR-DGELKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFSYGDAMFITR 338
>gi|260222591|emb|CBA32304.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase [Curvibacter
putative symbiont of Hydra magnipapillata]
Length = 358
Score = 423 bits (1089), Expect = e-116, Method: Composition-based stats.
Identities = 142/363 (39%), Positives = 206/363 (56%), Gaps = 21/363 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDF+LP + IA P R ++RL+ V D + DLP L + D +VF
Sbjct: 11 TLSDFDFELPEALIAQHPAAERSASRLL-----DGTGEVSVDRIFKDLPGLLRAGDLLVF 65
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKVI A+L G + ++ + + N + + R SK + G +
Sbjct: 66 NDTKVINARLFGEKT-----TGGKVELLIERVLGGNQVAAHMRVSKKPEVGATIKMTCAP 120
Query: 122 G-QSRLEATVIDKWNTGE----ILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
G + L AT++ +W + ++ + G + + G +PLPPYI D
Sbjct: 121 GHEDGLCATLLGRWPNVDGPIYRFVLSNDRGDDPYTLMERHGHVPLPPYITHS--DSPED 178
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT +AK G+VAAPTA LHF + ++L +IG++ VTLHVGAGTF PVK E+
Sbjct: 179 VQRYQTVFAKNPGAVAAPTAALHFDEAVFAQLDAIGVQRAHVTLHVGAGTFQPVKTENIA 238
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+H MHSE + T +A+ + K+RGGRIV+VGTTS+R LE+ SG TNIF
Sbjct: 239 EHQMHSEWYNVPLETQEAIAACKARGGRIVAVGTTSVRTLESWAKTGIA----SGDTNIF 294
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPG+ F+ VD+L++NFHLPKS+L+MLVSAF G +Y+ AI+ YRF+SYGD+ LL
Sbjct: 295 ITPGFDFKLVDVLVTNFHLPKSSLMMLVSAFTGYGHVMGLYRDAIARGYRFFSYGDSMLL 354
Query: 357 FQK 359
++
Sbjct: 355 TRR 357
>gi|56751764|ref|YP_172465.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus elongatus PCC 6301]
gi|81561754|sp|Q5N175|QUEA_SYNP6 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|56686723|dbj|BAD79945.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus elongatus PCC 6301]
Length = 359
Score = 423 bits (1089), Expect = e-116, Method: Composition-based stats.
Identities = 141/358 (39%), Positives = 189/358 (52%), Gaps = 14/358 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +D++LPP RIA V PRD ARL V + DLP L D ++
Sbjct: 10 HLDAYDYELPPDRIAQSAVEPRDHARLSVF----PDREQLWHRHFYDLPQLLRPGDLLIV 65
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+VI A+L G + + L P W +P K +K G + F
Sbjct: 66 NDTRVIPARLYGQKI----ETGVPVEVLLVEEHGPGYWLTLVKPGKRLKPGSAIAFGPNP 121
Query: 122 GQSRLEATVIDKWN-TGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A V TG L F Q++ +G +PLPPYI A D Y
Sbjct: 122 EDPLLVADVEASDPATGGRWLRFRGEAEAFWSQLATLGEMPLPPYIH----TTASDPERY 177
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHFT LL+ L +GI VTLHVG GTF V VED H M
Sbjct: 178 QTVYSRELGAVAAPTAGLHFTPELLTTLADMGIATAPVTLHVGIGTFRSVDVEDIRQHEM 237
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A T + + + K+ GGR+++VGTTS+R +E A G + P S N+FI PG
Sbjct: 238 HSERMMVPAATVEKIQATKAAGGRVIAVGTTSVRAIEGAAAS-GELKPGSDRVNLFIYPG 296
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YR++ +D L++NFHLP+S+L+MLVSA G + Y AI+ YRFYS+GD L+
Sbjct: 297 YRWQIIDGLITNFHLPRSSLMMLVSALIGRDRLLSAYATAIAEQYRFYSFGDAMLILP 354
>gi|51103036|gb|AAT96182.1| QueA [Pseudomonas viridiflava]
Length = 354
Score = 423 bits (1089), Expect = e-116, Method: Composition-based stats.
Identities = 145/358 (40%), Positives = 200/358 (55%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F FDLP S IA P+ R S+RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFDLPDSLIARHPLAERRSSRLLTLDGVSGA---LAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRSSKSPKPGSSILI--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
EA ++ + + L E+ + VG +PLPPYI RP + D Y
Sbjct: 110 --DGGGEAEMVARHDALFELRFAE----EVLPLLDRVGHMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAERAGAVAAPTAGLHFDQPLLEAIAAKGVETTFVTLHVGAGTFQPVRVEQIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + A+ + + GGR+++VGTTS+R LE+A DG++ P+SG T+IFI PG
Sbjct: 222 HTEWLEVGQDVVDAVAACRECGGRVIAVGTTSVRSLESAAR-DGVLKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFSYGDAMFITR 338
>gi|192291253|ref|YP_001991858.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodopseudomonas palustris TIE-1]
gi|238692597|sp|B3QIN0|QUEA_RHOPT RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|192285002|gb|ACF01383.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Rhodopseudomonas palustris TIE-1]
Length = 360
Score = 423 bits (1089), Expect = e-116, Method: Composition-based stats.
Identities = 193/362 (53%), Positives = 250/362 (69%), Gaps = 11/362 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDFDLP IALRPV PRD+AR++VV P+ + + D +V DLPA L D +V
Sbjct: 1 MRTELFDFDLPTQNIALRPVSPRDAARMLVVRPS----VPLEDRIVRDLPALLAPGDQLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI AQL G R E +I TL R+ W +P+K + GD++ F
Sbjct: 57 VNDTRVIAAQLTGRRIGRG--LEPKIEATLIKRLDGARWQALVKPAKKLLPGDVVRF-GH 113
Query: 121 DGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
DG+ L+ATV K + GE+ L FS G L++ I+ VG PLPPYIA KR DA+D
Sbjct: 114 DGRVCLLGHLDATVEAKGDAGEVTLAFSFHGPVLDQAIAEVGATPLPPYIASKRAPDAQD 173
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT +A +G+VAAPTAGLHFT+ L + L + G+ ++ +TLHVGAGTF+PVK EDT
Sbjct: 174 IADYQTMFASNEGAVAAPTAGLHFTAELETALAARGVGLHRITLHVGAGTFLPVKAEDTS 233
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+H MH+E G I + TA+ALN+ ++ GGRIV+VGTTSLRLLE+A +DG I P++ T+IF
Sbjct: 234 EHRMHAEWGTISSGTAEALNAARAAGGRIVAVGTTSLRLLESAARDDGRIAPFADETSIF 293
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFRAVD+LM+NFHLP+STL MLVSAFCG++ + Y HAI YRFYSYGD SLL
Sbjct: 294 ITPGYRFRAVDMLMTNFHLPRSTLFMLVSAFCGLDTMQAAYAHAIRTGYRFYSYGDASLL 353
Query: 357 FQ 358
F+
Sbjct: 354 FR 355
>gi|119897199|ref|YP_932412.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Azoarcus
sp. BH72]
gi|166216698|sp|A1K3X0|QUEA_AZOSB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|119669612|emb|CAL93525.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Azoarcus
sp. BH72]
Length = 345
Score = 423 bits (1089), Expect = e-116, Method: Composition-based stats.
Identities = 146/360 (40%), Positives = 201/360 (55%), Gaps = 22/360 (6%)
Query: 1 MMVK--EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDA 58
M + +FD+DLPP IA P+ R ++RL+VV + V++D DLP F+ D
Sbjct: 1 MTLSLQDFDYDLPPDLIAQAPLAERSASRLLVVDGD-----VLADRRFVDLPDFIRPGDL 55
Query: 59 IVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
+VFN+T+V+ A+L GV+ ++ + + + R SK K G L
Sbjct: 56 LVFNDTRVLHARLFGVKA-----TGGQVEVLVERPIGAHEALAQIRASKSPKPGSTLRLA 110
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
V +GE + + + G +PLPPYI +R D
Sbjct: 111 DA-------VDVTVLGRSGEFFHLRFPDDENVVDVLERYGKLPLPPYI--QRAAGDADEA 161
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT +A+ GSVAAPTAGLHF +L RL + G +VTLHVGAGTF PV+V+D H
Sbjct: 162 RYQTVFARAPGSVAAPTAGLHFDDAVLDRLRARGAGCAWVTLHVGAGTFQPVRVDDLAQH 221
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE I T +A+ ++ GGR+V+VGTTS+R LE A + SG T+IFI
Sbjct: 222 RMHSERYVIPQETVEAIARTRANGGRVVAVGTTSMRALEAAAQAGPLAA-GSGETDIFIL 280
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+RFR D+L++NFHLPKSTLLMLVSAF G + ++ Y HA++ YRF+SYGD LL +
Sbjct: 281 PGFRFRVADMLVTNFHLPKSTLLMLVSAFSGTDVIRRAYAHAVASRYRFFSYGDAMLLTR 340
>gi|71899186|ref|ZP_00681349.1| Queuosine biosynthesis protein [Xylella fastidiosa Ann-1]
gi|71731044|gb|EAO33112.1| Queuosine biosynthesis protein [Xylella fastidiosa Ann-1]
Length = 347
Score = 423 bits (1089), Expect = e-116, Method: Composition-based stats.
Identities = 145/359 (40%), Positives = 207/359 (57%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +F +DLP IA P+ R ++RLM+V S P D V DLP L D +V
Sbjct: 2 LKKSDFHYDLPEELIAQGPLPERSASRLMLVP---SAPEQFQDCYVRDLPELLQPGDLLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + + V R + +K G+ +
Sbjct: 59 FNDTRVIPARLFGRKVS-----GGRVEVLIERFLGTHQAVVQLRTCRSLKVGNRILL--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A V+ + GE L+ LE+ +S VG +PLPPYI R+ D D Y
Sbjct: 111 --DAGGHAEVLGR--DGEFYLLSFDVESPLEQWLSDVGQLPLPPYIHRE--PDEYDRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF +LL+RL + G++ ++TLHVGAGTF PV+V +H+M
Sbjct: 165 QTVFARAVGAVAAPTAGLHFDESLLARLRARGVEFGYITLHVGAGTFQPVRVALLQEHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A + + S ++RGGR+++VGTT +R LE+A G + P+ G T IFI PG
Sbjct: 225 HSEWFKVGAELVEQVRSARARGGRVIAVGTTVVRSLESAMRH-GELQPFVGETQIFIFPG 283
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
Y R+VD +++NFHLP+STLLMLV+AF G Y HA+ YRF+SYGD LLF +
Sbjct: 284 YCIRSVDAMVTNFHLPESTLLMLVAAFAGRTRILDAYYHAVQQRYRFFSYGDAMLLFPR 342
>gi|78222071|ref|YP_383818.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Geobacter
metallireducens GS-15]
gi|91207424|sp|Q39XD1|QUEA_GEOMG RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|78193326|gb|ABB31093.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Geobacter
metallireducens GS-15]
Length = 343
Score = 423 bits (1089), Expect = e-116, Method: Composition-based stats.
Identities = 137/358 (38%), Positives = 195/358 (54%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD++LPP IA P+ RD+ RLM V +S ++ D +V
Sbjct: 1 MRVDDFDYELPPELIAQEPLDRRDATRLMTVDRLKGEVGEVS---FREITRLFRPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVS--PNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+ GV+ + L R++ W R SK + G +
Sbjct: 58 VNDTRVIPARFFGVKES-----GGRVEVFLERRLAAVGERWQCLLRSSKPSRPGTRIVLA 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ A VI + + G+ V + + G +PLPPYI R D
Sbjct: 113 EG-----VSAEVIGRSD-GDTWCVSFTPVTGFDEWLERNGAMPLPPYIRRSAA--DADRE 164
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT +++ +G+VAAPTAGLHFT LL L G+++ +TLHVG GTFMP++VE ++H
Sbjct: 165 RYQTVFSRQRGAVAAPTAGLHFTPELLDELRERGVEIATLTLHVGLGTFMPIRVERVEEH 224
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH E I + TA A+N+ K GR++++GTT+ R LE A +DG + +G T IFI
Sbjct: 225 RMHRERYIIPSATADAVNARKGGKGRVIALGTTTCRTLEHAARDDGRVAAGAGETGIFIY 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY F+ VD L++NFHLPKSTLLMLVSAF G E + Y A++ +RF+SYGD +
Sbjct: 285 PGYHFKTVDALITNFHLPKSTLLMLVSAFAGKELLFRAYHEAVTRRFRFFSYGDAMFV 342
>gi|193216172|ref|YP_001997371.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Chloroherpeton thalassium ATCC 35110]
gi|238692714|sp|B3QXK9|QUEA_CHLT3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|193089649|gb|ACF14924.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Chloroherpeton thalassium ATCC 35110]
Length = 346
Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats.
Identities = 129/360 (35%), Positives = 192/360 (53%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F + LP + +A P PRDS +LMV+ SDL + D +V
Sbjct: 1 MRLSDFRYTLPKTAVAEYPSEPRDSCKLMVLDRRKKTTD---HKQFSDLLDYFKKGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
N+TKV A+L G + + +I L ++ W V P++ ++ G+ ++F
Sbjct: 58 LNDTKVFPARLYGNK----EKTSAKIEVFLLRELNKQAGLWDVLVEPARKVRVGNKIYFP 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ L A V+D + + F I++ + VG +P+PPYI KR + D
Sbjct: 114 ND-----LVAEVVDNTTSRGRTIRFLNPDIDIFSIVEKVGQMPIPPYI--KRDPEEEDKE 166
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT +A+I G+V AP AGLHFT+ LL + G+++ +TLH G TF V+VED H
Sbjct: 167 RYQTVFARIPGAVVAPLAGLHFTNPLLKAIQDKGVEIISLTLHPGLSTFREVEVEDISKH 226
Query: 239 IMHSEIGFIDAPTAQALNSVKSRG-GRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
M SE + A+ +NS+K + GR+ +VGTT R LE T +G I G+T+ +I
Sbjct: 227 KMDSEYYNVPYSCAKVINSIKEKKSGRVFAVGTTVCRALEANATVEGRIKFGEGWTDKYI 286
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
P Y F+ VD L++NFH P+STLLMLVSAF + K Y+ A+ Y+F YGD L+F
Sbjct: 287 YPPYDFKVVDALITNFHQPESTLLMLVSAFAEHDFLMKNYKLALKSDYKFLGYGDAMLIF 346
>gi|88803608|ref|ZP_01119133.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Polaribacter irgensii 23-P]
gi|88780620|gb|EAR11800.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Polaribacter irgensii 23-P]
Length = 349
Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats.
Identities = 128/361 (35%), Positives = 189/361 (52%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F+F+LP +A+ P RD +RLMV++ I D+ + + D ++
Sbjct: 1 MKLSHFEFELPEELLAIYPAEHRDESRLMVLNKAAGT---IEHKQFKDVINYFDEGDVLM 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV--SPNSWSVYARPSKVIKKGDILHFF 118
N+TKV A++ G + + I L + W V P++ I+ G+ L F
Sbjct: 58 LNDTKVFPARMFGNK----EKTGARIEVFLLRELNAENRLWDVLVDPARKIRIGNKLFFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D L A VID + L F G ++ +G PLP IAR+ ++ D
Sbjct: 114 EDD---SLVAEVIDNTTSRGRTLRFLFDGSYEAFRAKLLELGQTPLPKAIARE--VEPSD 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+VAAP+AGLHF+ +LL RL G+ +TLHVG GTF V+VED
Sbjct: 169 TERYQTIYAKNEGAVAAPSAGLHFSKHLLKRLEIKGVDFAKMTLHVGLGTFSAVEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I TA +N K RI +VGTT +R +E++ + +N + G+TN F
Sbjct: 229 KHKMDSEQIVIPEKTAVMINKAKKEKRRICAVGTTVMRTVESSVSSKQELNAFEGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ P + F + +++NFHLPKSTLLM +AF G + + Y+ AI Y+F +YGD L+
Sbjct: 289 LFPPHEFSIANAMITNFHLPKSTLLMQAAAFGGYDFIMEAYKVAIKEGYKFSTYGDAMLI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|16331808|ref|NP_442536.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechocystis sp. PCC 6803]
gi|3914540|sp|Q55850|QUEA_SYNY3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|1001768|dbj|BAA10606.1| queuosine biosynthesis protein; QueA [Synechocystis sp. PCC 6803]
Length = 366
Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats.
Identities = 139/364 (38%), Positives = 203/364 (55%), Gaps = 20/364 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +D+ LP IA P PRD +RL+VV P + DL +L D +V N
Sbjct: 7 LSSYDYHLPADCIAQTPAVPRDHSRLLVV----KDPFTVDHQHFYDLGNYLKPGDLLVLN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKV+ A+L+G + + + L + N W +P K +K G + F ++DG
Sbjct: 63 DTKVMPARLHGQKENGVA-----VEILLLTECTENQWIALVKPGKRLKLGAKVKFPARDG 117
Query: 123 Q-SRLEATVIDKWN-TGEILLVFSIS-GIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ L AT++ + + TG LL F + G L + G IP PPYI ++ + +
Sbjct: 118 EKPDLWATILQRDDATGGRLLEFVLEPGQRLWDVLPDYGEIPFPPYIGDRQATNDQ---- 173
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ G+VAAPTAGLHFT L ++L G++ VTLHVG GTF PV+ E+ DH+
Sbjct: 174 YQTIYAEKLGAVAAPTAGLHFTEELFTKLAQQGVQTAKVTLHVGIGTFRPVEAENILDHV 233
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED----GIINPWSGFTNI 295
MH E + T + + ++ GGRI +VGTT +R LE E + P+ G T++
Sbjct: 234 MHQEWIDVPPTTVEVIEKTRASGGRIFAVGTTVVRCLEGMAQESDFPRQPLQPFRGQTDL 293
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGY++R VD L++NFHLPKS+LLMLVSA +Y+ AI+ YRFYS+GD +
Sbjct: 294 FIYPGYQWRLVDGLITNFHLPKSSLLMLVSALISRPRLMAIYETAIAKGYRFYSFGDAMV 353
Query: 356 LFQK 359
+ +
Sbjct: 354 ILPE 357
>gi|257062151|ref|YP_003140039.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cyanothece
sp. PCC 8802]
gi|256592317|gb|ACV03204.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Cyanothece
sp. PCC 8802]
Length = 372
Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats.
Identities = 149/371 (40%), Positives = 212/371 (57%), Gaps = 27/371 (7%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D+ LP IA PV PRDS+RL+V++ + + +LP +L S D +V
Sbjct: 6 LLASYDYHLPAELIAQSPVTPRDSSRLLVLNSLTTQV----HSVFRELPQWLRSGDLLVL 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNT+VI A+L G + + L +P SW +P K K+G + F
Sbjct: 62 NNTRVIPARLYGQKT-----TGAPVEILLLEEKTPLSWLALVKPGKRFKRGSQIWFPHPP 116
Query: 122 GQSR-----LEATVIDKW-NTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDA 174
++ L+ TVID TG LL F + +E I +G IPLPPY+
Sbjct: 117 DETTESSVYLKTTVIDVDPETGGRLLQFEAASVEAFWSAIEELGKIPLPPYVTSSEAQPG 176
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
+ YQT YA+ G+VAAPTAGLHFT +LL RL + GI+ ++TLHVG GTF PV+V D
Sbjct: 177 Q----YQTVYAQKPGAVAAPTAGLHFTPDLLQRLQAQGIQQSYITLHVGVGTFRPVEVGD 232
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET------ATTEDGIINP 288
H MHSE + + T +A+ K+RGGR+++VGTT +R LE A + G+I P
Sbjct: 233 ITQHQMHSEWLEVPSSTVEAIAETKARGGRVIAVGTTVVRSLEGVAQIAKAEGKSGLI-P 291
Query: 289 WSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
+ G T++FI PGY ++ V+ +++NFHLP+S+LLMLVSA G E +YQ AI YRFY
Sbjct: 292 FRGRTDLFIYPGYSWQVVEGMITNFHLPRSSLLMLVSALIGRERLMSVYQTAIDEKYRFY 351
Query: 349 SYGDTSLLFQK 359
S+GD L+ +
Sbjct: 352 SFGDGMLILPE 362
>gi|197118813|ref|YP_002139240.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Geobacter
bemidjiensis Bem]
gi|226713840|sp|B5EFX9|QUEA_GEOBB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|197088173|gb|ACH39444.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Geobacter
bemidjiensis Bem]
Length = 341
Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats.
Identities = 145/358 (40%), Positives = 205/358 (57%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD++LPP IA P RD++RL+ + I + V+ + A D +V
Sbjct: 1 MFLSDFDYELPPELIAQHPASRRDASRLLTLDRLSGA---IGEATVASIAAQFLPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV--SPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L+G + + L RV P WS + SK K G + F
Sbjct: 58 LNDTRVIPARLHGHKES-----GGAVEIFLVRRVAGEPECWSCLIKASKSPKNGCRVVF- 111
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ ATV+++ + G+ ++F S + + G++PLPPYI KR + D
Sbjct: 112 ----PGGVTATVLER-DGGDWRVLFEGS-DDFMAWLEQTGSMPLPPYI--KRAPEGEDLE 163
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT +A+ +G+VAAPTAGLHFT +L + G+++ VTLHVG GTFMP++VED +H
Sbjct: 164 RYQTVFAREKGAVAAPTAGLHFTPAILDEIRGRGVEIVSVTLHVGLGTFMPIRVEDLSEH 223
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH E+ I TA A+ K RGGR+V++GTTSLR LE A G + +IFI
Sbjct: 224 TMHRELYRIPQETAAAIRRTKERGGRVVALGTTSLRALEHAAAS-GEVAAGEREADIFIL 282
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGYRFR VD L++NFHLPKSTL MLV AF G E + Y+ A+S +RF+SYGD +
Sbjct: 283 PGYRFRVVDALITNFHLPKSTLFMLVCAFAGKEAMLEAYREAVSRRFRFFSYGDAMFI 340
>gi|71734363|ref|YP_273557.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. phaseolicola 1448A]
gi|91207393|sp|Q48M15|QUEA_PSE14 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|71554916|gb|AAZ34127.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. phaseolicola 1448A]
Length = 354
Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats.
Identities = 145/358 (40%), Positives = 200/358 (55%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S+RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTLDGPTGA---LAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRSSKSPKPGSSILI--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
EA ++ + + L E+ + VG +PLPPYI RP + D Y
Sbjct: 110 --DGGGEAEMVARHHALFELRFAE----EVLPLLERVGHMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDQPLLEAIAAKGVETAFVTLHVGAGTFQPVRVEQIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + ++RGGR+++VGTTS+R LE+A DG + +SG T+IFI PG
Sbjct: 222 HSEWLEVGQDVVDAVAACRARGGRVIAVGTTSVRSLESAAR-DGELKSFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAGAIEHGYRFFSYGDAMFITR 338
>gi|319892693|ref|YP_004149568.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase
[Staphylococcus pseudintermedius HKU10-03]
gi|317162389|gb|ADV05932.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase
[Staphylococcus pseudintermedius HKU10-03]
Length = 341
Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats.
Identities = 144/357 (40%), Positives = 208/357 (58%), Gaps = 16/357 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EFD+ LP IA P+ RD +RL+ ++ + D D+ F D +V
Sbjct: 1 MNIEEFDYVLPEPLIAQTPLKQRDQSRLLYLNRDTGET---EDLHFKDITRFFQPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G++ ++ + ++ + W V +P+K IK G L F
Sbjct: 58 LNDTRVMPARLFGIK----EETNAKVEMLMLTQIEGDDWEVLLKPAKRIKLGQTLSF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ +++AT I + + G ++ S GI L+ ++ +G +PLPPYI + Y
Sbjct: 111 -GEGKIKATCIKELDQGGRIMRLSYEGI-LQERLDELGEMPLPPYIKERLDE----KERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL + G+++ F+TLHVG GTF PV V+ DDH M
Sbjct: 165 QTVYAKAAGSAAAPTAGLHFTDALLDDIRRQGVQIAFITLHVGLGTFRPVSVDHIDDHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + TA LN K+ G RI+SVGTTS R LET ++ SG+TNIFI PG
Sbjct: 225 HSEYYQMSQETADILNQTKAAGHRIISVGTTSTRTLETIRSQFDTFQATSGWTNIFIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F+A+D L++NFHLPKSTL+MLVSAF + Y HA++ YRF+S+GD ++
Sbjct: 285 FEFKAIDGLITNFHLPKSTLVMLVSAFSSRQFVLSAYHHAVAEKYRFFSFGDAMIII 341
>gi|255261251|ref|ZP_05340593.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Thalassiobium sp. R2A62]
gi|255103586|gb|EET46260.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Thalassiobium sp. R2A62]
Length = 348
Score = 422 bits (1086), Expect = e-116, Method: Composition-based stats.
Identities = 166/361 (45%), Positives = 229/361 (63%), Gaps = 17/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP RIA+RP PR SARL++ + I D +V+DL L D +V
Sbjct: 1 MKLSDFDFDLPDDRIAVRPTQPRSSARLLLARGDD-----ILDRVVTDLIDILQPGDRLV 55
Query: 61 FNNTKVITAQLNGVRF--CHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L+G R I TL + +W+ +P K + +G+ + F
Sbjct: 56 LNDTRVIPARLSGQRHRNSAQGPVSAAIDVTLLTPQADGAWTALIKPLKKVTEGEDIVFS 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
L AT+I K G+ L F+++G + + ++ G +PLPPYIA KR DA+D+
Sbjct: 116 DD-----LSATLIGK-EDGQGRLKFNLTGDDFDAALAAAGAMPLPPYIAAKRAADAQDHT 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ QG+VAAPTA LHF LL L + GI+ +VTLHVGAGTF+PVKV++ DH
Sbjct: 170 DYQTVWARHQGAVAAPTASLHFDQPLLEALNAKGIQFTYVTLHVGAGTFLPVKVDNIADH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE G I A A+NS GR++ VGTT+LRL+E+A ++G + W G T+IFIT
Sbjct: 230 KMHSEWGQITHAAADAINST---TGRVIPVGTTALRLIESAA-QNGRLAAWEGPTDIFIT 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG++F+ D LM+NFHLPKSTL+MLVSA G + K +Y HA+ H YRF+SYGD+SLL
Sbjct: 286 PGFKFQIADGLMTNFHLPKSTLMMLVSALMGTQNIKDIYAHALRHEYRFFSYGDSSLLLP 345
Query: 359 K 359
+
Sbjct: 346 Q 346
>gi|237747214|ref|ZP_04577694.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase [Oxalobacter
formigenes HOxBLS]
gi|229378565|gb|EEO28656.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase [Oxalobacter
formigenes HOxBLS]
Length = 343
Score = 422 bits (1086), Expect = e-116, Method: Composition-based stats.
Identities = 147/354 (41%), Positives = 203/354 (57%), Gaps = 22/354 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LP IA P+ R ++RL++ ++D L +L+ +D +VFN
Sbjct: 4 LSDFDFELPEELIAQFPLEKRSASRLLIARDEK-----LADSRFDHLIDYLDRDDLLVFN 58
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NTKV+ A+ G + + +I + + + R SK K+ +L
Sbjct: 59 NTKVLKARFFGAK-----KTGGKIEILIERILDNRTALAKIRASKSPKENSLLLIDD--- 110
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
E V K GE ++ S +L + G +PLPPYIA R DA D YQT
Sbjct: 111 ----ELEVSVKGREGEFYVLHFPS--DLFSILDHHGHLPLPPYIA--RTADAYDEKRYQT 162
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
+AK G+VAAPTAGLHF L+ +L GI+ ++TLHVGAGTF PV+ E+ D+H MH+
Sbjct: 163 VFAKEPGAVAAPTAGLHFDEELMGKLEEKGIRSAYLTLHVGAGTFQPVRSENLDEHKMHT 222
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I T A+ + + ++V+VGTTSLR LE+A ++ G + S T++FITPGYR
Sbjct: 223 EWYTIPQETVYAVKTARENKRKVVAVGTTSLRALESA-SQTGQLVAGSNETSLFITPGYR 281
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
F VD L++NFHLPKSTLLMLVSAF G E +K Y HAIS YRF+SYGD LL
Sbjct: 282 FNTVDWLVTNFHLPKSTLLMLVSAFAGYELIRKAYAHAISQQYRFFSYGDAMLL 335
>gi|71908890|ref|YP_286477.1| queuosine biosynthesis protein [Dechloromonas aromatica RCB]
gi|91207420|sp|Q47AX4|QUEA_DECAR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|71848511|gb|AAZ48007.1| Queuosine biosynthesis protein [Dechloromonas aromatica RCB]
Length = 352
Score = 422 bits (1086), Expect = e-116, Method: Composition-based stats.
Identities = 145/359 (40%), Positives = 197/359 (54%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ V +FDF LPP IA P R +RL+ V C + D +DLP L + D +V
Sbjct: 3 LTVDDFDFPLPPELIAQHPAAERRGSRLLHV-----CGEQLVDRRFADLPTLLKAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+ G + ++ L V R SK K G +
Sbjct: 58 FNDTRVIKARFFGQK-----DTGGQVEIMLERIVDATHAICQVRASKAPKAGSTMRLADA 112
Query: 121 DGQSRLEATVIDK-WNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ + G+ + + G +PLPPYI P + D
Sbjct: 113 -----FTVKMTGRAGADGDFFALELAEPGDFWELSERYGKLPLPPYIEH--PAEGTDETR 165
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ G+VAAPTAGLHF ++L+ L + GI F+TLHVGAGT+ P++VE DH
Sbjct: 166 YQTVYAREPGAVAAPTAGLHFDEDMLATLQAQGINTAFLTLHVGAGTYRPMRVEKIADHR 225
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE I TA A+ + ++ GG++++VGTTSLR LE+A EDG + T+IFITP
Sbjct: 226 MHSERFEIPPATADAITTTRAAGGQVIAVGTTSLRALESAGNEDGTVQVGGAETSIFITP 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
GYRF+ VD L++NFHLPKSTLLMLVSAF G + + Y HA++ YRF+SYGD LL +
Sbjct: 286 GYRFQVVDRLITNFHLPKSTLLMLVSAFAGYDHIRAAYAHAVAERYRFFSYGDAMLLER 344
>gi|223937431|ref|ZP_03629336.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [bacterium
Ellin514]
gi|223893982|gb|EEF60438.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [bacterium
Ellin514]
Length = 358
Score = 422 bits (1086), Expect = e-116, Method: Composition-based stats.
Identities = 156/366 (42%), Positives = 201/366 (54%), Gaps = 17/366 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LPP IA P RD +RL+V+ N I+ D+ FL D +V
Sbjct: 1 MRTSDFDFALPPELIAQAPTATRDQSRLLVLKRNT---AEIAHRKFRDVLEFLKPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN++VI A+L + R + L + N W V RP K + G L F +
Sbjct: 58 LNNSRVIPARLRAL----NARTNGQFEVLLLEEHATNDWWVMMRPGKRARIGTELVFRDK 113
Query: 121 DGQ-SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID-ARDYV 178
G + + A+VID G + F+ + +E + +G IPLPPYI R A D +
Sbjct: 114 TGVVAHIRASVIDTNPEGHRRIHFTGTPNIIEN-LDALGEIPLPPYIERNSDKGLAEDDI 172
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YAK GSVAAPTAGLHFT LL + S GI++ FVTLHVG GTF PVK E +H
Sbjct: 173 RYQTVYAKPAGSVAAPTAGLHFTDELLHEIRSRGIQICFVTLHVGLGTFAPVKAETLSEH 232
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFI 297
+MH E + A TAQ + + K G RI++VGTTS+R+LE+ A G + G T IFI
Sbjct: 233 VMHEERYELSAETAQTITTAKHAGRRIIAVGTTSVRVLESVAAQHHGKLIAGKGRTRIFI 292
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFC------GIEETKKMYQHAISHAYRFYSYG 351
P Y F VD+L++NFHLP STLLMLVSAF G E Y A+ YRF+SYG
Sbjct: 293 HPPYSFSVVDVLLTNFHLPCSTLLMLVSAFAAPGEMRGREIVLAAYAEAVREKYRFFSYG 352
Query: 352 DTSLLF 357
D L+
Sbjct: 353 DAMLVI 358
>gi|158337753|ref|YP_001518929.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acaryochloris marina MBIC11017]
gi|189038509|sp|B0C0B9|QUEA_ACAM1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|158307994|gb|ABW29611.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acaryochloris marina MBIC11017]
Length = 369
Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats.
Identities = 146/360 (40%), Positives = 204/360 (56%), Gaps = 15/360 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D+ LP + IA P+ PRD +RL+VV + DL A L D +VF
Sbjct: 11 TLQAYDYLLPETFIAQTPLVPRDRSRLLVV-----QQQAHQHKIFQDLVALLQPGDLLVF 65
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+VI A+L G + + + L PN+W RP + +K G + F +
Sbjct: 66 NDTRVIPARLLGRKLNSELAQP--VEVFLLEPRQPNTWLALVRPGRRLKPGAQIEFGPPE 123
Query: 122 GQSRLEATVI--DKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ L A ++ D G I+ S+ E + +G +PLPPYI +
Sbjct: 124 -RPLLRAEILATDADTRGRIIQFESLVEEPFEDLLEQLGEVPLPPYIQESTAQPEQ---- 178
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ G+VAAPTAGLHFT LL+RL S GI +TLHVG GTF PV+ +D H
Sbjct: 179 YQTVYAQHPGAVAAPTAGLHFTPELLARLQSEGINQAHLTLHVGIGTFRPVETDDILQHH 238
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE + A T A+ + K+ GGR+++VGTT R LE A ++G + PW G TN+FI P
Sbjct: 239 MHSEWVDLPAATVDAIRTTKASGGRVIAVGTTVTRALEGAC-QNGPLVPWQGRTNLFIYP 297
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
Y++R VD L++NFHLPKS+LLMLVSA G E +Y+ AI+ YRFYS+GD L+ +
Sbjct: 298 SYQWRVVDGLITNFHLPKSSLLMLVSALVGRERLLALYEDAIAQQYRFYSFGDAMLVLPE 357
>gi|254450756|ref|ZP_05064193.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Octadecabacter antarcticus 238]
gi|198265162|gb|EDY89432.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Octadecabacter antarcticus 238]
Length = 350
Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats.
Identities = 162/361 (44%), Positives = 227/361 (62%), Gaps = 14/361 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP + IA+RPV PR SA+L+V D V+DL + L + D +V
Sbjct: 1 MKLSDFDFDLPDTLIAVRPVRPRSSAKLLVADG-----PETHDLQVTDLRSVLQAGDHLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREK--EISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+L G R +I TL + +W+ +P + ++ G+ + F
Sbjct: 56 LNDTKVIPARLFGERIRKSPDGAGLAKIEVTLLEPQADGTWAALIKPLRKVRDGERIVFS 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
L A ++ +++ G L F++ + + ++ VG +PLPPYIA KRP D D
Sbjct: 116 QD-----LSAMLVHRYD-GMGYLEFNVKDDDFDTALNAVGAMPLPPYIAAKRPADDLDKD 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LL LI++G+K+ +VTLHVGAGTF+PVKV+D DH
Sbjct: 170 DYQTVWARASGAVAAPTASLHFEQWLLDDLIAMGVKISYVTLHVGAGTFVPVKVDDVADH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
+MHSE G + A A + + K+ GGR++ VGTT+ RL+ETA G + W G T+IFIT
Sbjct: 230 VMHSEWGQVSALAASDIMATKAAGGRVIPVGTTACRLIETAGAS-GTLVEWEGETDIFIT 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ F+ D LM+NFHLPKSTL+MLVSA G + K +Y HAI++ YRF+SYGD S+L
Sbjct: 289 PGFEFQITDGLMTNFHLPKSTLMMLVSALMGTQRIKDIYAHAIANEYRFFSYGDASILLP 348
Query: 359 K 359
K
Sbjct: 349 K 349
>gi|237737787|ref|ZP_04568268.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium mortiferum ATCC 9817]
gi|229419667|gb|EEO34714.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium mortiferum ATCC 9817]
Length = 343
Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats.
Identities = 140/356 (39%), Positives = 195/356 (54%), Gaps = 16/356 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ ++D+ LP I P PRD ARLM+V I D+ +L D +V
Sbjct: 4 KLHDYDYHLPEELIGQEPREPRDHARLMLVDK---TNKKIEHKHFYDIIDYLQEGDILVR 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKVI A+L G + + L R++ ++W +P+K +K G L+
Sbjct: 61 NSTKVIPARLFGHKE-----TGGVLEILLIKRINLDTWECLLKPAKKLKLGQKLYMGQ-- 113
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
S L A +I+ + G +L F+ G E + +G +PLPPYI ++ YQ
Sbjct: 114 -NSELVAELIEIKDDGNRVLKFTYEG-AFEEVLDKLGNMPLPPYIVE----TLKEKERYQ 167
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YA+ SVAAPTAGLHFT LL ++ GIK+ + L VG GTF PV+ ED DH MH
Sbjct: 168 TVYAQRGESVAAPTAGLHFTKELLEKIEKKGIKIVDIFLEVGLGTFRPVQTEDVLDHKMH 227
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
EI I A +N K+ G RI+SVGTTS R LE++ E+G + T+IFI PGY
Sbjct: 228 EEIFEIPQEAADIINKGKAEGRRIISVGTTSTRALESSVDENGKVIAQKASTDIFIYPGY 287
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+ +D L++NFHLPKSTLLMLVSAF E +Y+ A+ Y F+S+GD ++
Sbjct: 288 EFKVIDALITNFHLPKSTLLMLVSAFSSREFMLSVYETAVKEKYHFFSFGDAMFIY 343
>gi|189464705|ref|ZP_03013490.1| hypothetical protein BACINT_01049 [Bacteroides intestinalis DSM
17393]
gi|189436979|gb|EDV05964.1| hypothetical protein BACINT_01049 [Bacteroides intestinalis DSM
17393]
Length = 352
Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats.
Identities = 124/363 (34%), Positives = 188/363 (51%), Gaps = 15/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P RD +RLMV+H I D+ + + D +
Sbjct: 1 MKLSQFKFKLPEEKIALHPTKYRDESRLMVLHRKTG---EIEHKEFKDVLNYFDDKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK----EKTGARIEVFLLRELNEELRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDARD 176
D + A VID + L F G E ++ + +G PLP I RP++ D
Sbjct: 114 DDD---SMVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYALGETPLPHSII-NRPVEPDD 169
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+Q+ +A+ +G+V APTA LHF+ L+ RL GI ++TLH G G F + VED
Sbjct: 170 SERFQSIFARNEGAVTAPTASLHFSRELMKRLEIKGIDFAYITLHAGLGNFRDIDVEDLT 229
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H SE ++ +N K ++ +VGTT +R +E+ + DG + P+ G+TN F
Sbjct: 230 KHKTDSEQMVVNEEAVSIVNRAKDMNRQVCAVGTTVMRAIESTVSTDGHLKPYEGWTNKF 289
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + ++SNFH+P STLLM+V+AF G ++ + Y A+ YRF +YGD L+
Sbjct: 290 IFPPYDFTVANAMISNFHMPLSTLLMIVAAFGGYDQVMEAYNVALKEGYRFGTYGDAMLI 349
Query: 357 FQK 359
K
Sbjct: 350 TDK 352
>gi|91207335|sp|Q5GZY2|QUEA_XANOR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
Length = 356
Score = 421 bits (1084), Expect = e-116, Method: Composition-based stats.
Identities = 142/364 (39%), Positives = 206/364 (56%), Gaps = 22/364 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F +DLP IA P+ R ++RL+VV P P ++D DLP L D ++
Sbjct: 1 MKKSDFHYDLPEELIAQAPLAERAASRLLVVPP---SPQALADRRARDLPELLQPGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + V SK K G ++
Sbjct: 58 FNDTRVIPARLFGQKAS-----GGRVEILIERLLGERQARVQIGASKSPKAGSLIAL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ +A V+ + G L+ LE + G +PLPPYI R+ ++ D Y
Sbjct: 110 --DAGGQAEVLGR--DGAFYLLRFEIPTPLEHWLLEAGRLPLPPYIRREPGVE--DRERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF LL+RL G++ VTLHVGAGTF PV+V+ D H+M
Sbjct: 164 QTVFAREVGAVAAPTAGLHFDEALLARLRERGVEFGHVTLHVGAGTFQPVRVDKLDQHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-----TTEDGIINPWSGFTNI 295
H E + A + + ++RGGR+++VGTT +R LE+A +G + P++G T I
Sbjct: 224 HKEWLNVGAALVEQVRRTRARGGRVIAVGTTVVRSLESAWRTTDAAPEGELQPFAGETQI 283
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGYR R+VD +++NFHLP+STL+M+VSAF G E + Y HAI+ YRF+SYGD L
Sbjct: 284 FILPGYRIRSVDAMVTNFHLPESTLMMMVSAFAGRERIFEAYHHAIAQRYRFFSYGDAML 343
Query: 356 LFQK 359
L+ +
Sbjct: 344 LWSR 347
>gi|317404681|gb|EFV85073.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Achromobacter xylosoxidans C54]
Length = 351
Score = 421 bits (1084), Expect = e-116, Method: Composition-based stats.
Identities = 139/363 (38%), Positives = 200/363 (55%), Gaps = 27/363 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ V +FD++LPP IA P R +RL+ + + D +DL L D +V
Sbjct: 4 LTVSDFDYELPPELIAQTPAAQRTGSRLLHLDGASQ----LHDRQFADLEKLLRPGDLLV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + ++ + + + R SK G +L
Sbjct: 60 FNDTRVIKARLAGHKI-----TGGKVEVLVERITDTDRALAHVRASKSPGAGMVLRLADA 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ATV+ + L G LE + G PLPPYI DA D Y
Sbjct: 115 -----FDATVLGREGE---LFDIRFPGPVLE-LLDAHGATPLPPYITH--AADAGDDDRY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF L RL ++G++ FVTLHVGAGTF PV+V++ DH+M
Sbjct: 164 QTVYAREPGAVAAPTAGLHFDQPTLDRLAALGVERAFVTLHVGAGTFQPVRVDNLADHVM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-------DGIINPWSGFT 293
H+E + T A+ + ++RGGR+++VGTTS+R LE+A + + G T
Sbjct: 224 HAEWFTVPQATVDAIAATRARGGRVIAVGTTSVRALESAAAQTEGRTAPGLPLAAAQGDT 283
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+FITPGY++R +D L++NFHLP+STLLMLVSA G+E ++ Y HA++ YRF+SYGD
Sbjct: 284 RLFITPGYQYRVIDALVTNFHLPQSTLLMLVSALAGVEPIRRAYAHAVAQRYRFFSYGDA 343
Query: 354 SLL 356
+
Sbjct: 344 MFI 346
>gi|291613426|ref|YP_003523583.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Sideroxydans lithotrophicus ES-1]
gi|291583538|gb|ADE11196.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Sideroxydans lithotrophicus ES-1]
Length = 340
Score = 421 bits (1084), Expect = e-116, Method: Composition-based stats.
Identities = 139/360 (38%), Positives = 197/360 (54%), Gaps = 20/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P R ++RL+ V + D +DL ++ +D +V
Sbjct: 1 MRTDDFDFILPERLIAQHPPLQRGASRLLQV-----GKTGLKDSQFADLHGLVHGHDLLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + ++ + + + R SK K G L
Sbjct: 56 LNDTRVLKARLFGEKES-----GGKVEVLVERVLGEHEVLAQVRASKTPKPGSRLLLAE- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ V GE + + + G +PLPPYIA A D Y
Sbjct: 110 ------KLRVKVLGREGEFFHLCFEGAAAVTALLERYGHLPLPPYIAH--VAGAEDEERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF +L L + + +VTLHVGAGTF PV+ E+ ++H+M
Sbjct: 162 QTVFAREPGAVAAPTAGLHFGETMLQALRDKKVDIAYVTLHVGAGTFKPVRAENIEEHVM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I T A+ K++GGRI++VGTTSLR LE+A G + SG T+IFITPG
Sbjct: 222 HSERYTIPQATVDAIREAKAKGGRIIAVGTTSLRALESAAAS-GELVAGSGETSIFITPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRF VD+L++NFHLP+STLLMLV AF G+E+ Y+HA+ YRF+SYGD L+ +++
Sbjct: 281 YRFGVVDVLLTNFHLPRSTLLMLVCAFGGMEKMLAAYRHAVEKEYRFFSYGDAMLIEREQ 340
>gi|327399541|ref|YP_004340410.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Hippea
maritima DSM 10411]
gi|327182170|gb|AEA34351.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Hippea
maritima DSM 10411]
Length = 343
Score = 421 bits (1084), Expect = e-116, Method: Composition-based stats.
Identities = 132/359 (36%), Positives = 203/359 (56%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FD++LP IA P PRD +L+V + I + ++ +++ ND +V
Sbjct: 1 MEVSLFDYNLPKELIAQHPHIPRDECKLLVCNRQ---NHTIEHRIFKEIINYIDENDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A++ + +I L + + R +KK I++ +
Sbjct: 58 LNDTKVIPARIFAQKP-----TGGKIEIFLLEEIGKGRFLCLTR--GKLKKDTIVYLKNS 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI--DARDYV 178
A + N+ + ++ F + + + +G +PLPPYI R +D+
Sbjct: 111 K-----TARITRIENSDKRIVEFE-TNENIYELLEDIGEVPLPPYIQRNYDNYNKEKDFK 164
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT +AK +G+VA+PTAGLHFT L++ + + G+K+ ++TLHVG GTF PVK ++ + H
Sbjct: 165 YYQTVFAKKEGAVASPTAGLHFTEKLINSIKAKGVKIAYITLHVGIGTFRPVKEKEVEKH 224
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE I TA N KS+ R+++VGTT +R LE++ +DGI+ P T+IFI
Sbjct: 225 KMHSEKYQISKETADLFNQTKSKRRRVIAVGTTVVRALESSINKDGILKPQKSSTDIFIY 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+++AVD L++NFHLPKSTLLMLVSAF E+ Y+ AI YRF+S+GD ++
Sbjct: 285 PGYKYKAVDALITNFHLPKSTLLMLVSAFYEREKILNCYKEAIDKHYRFFSFGDAMFIY 343
>gi|291295061|ref|YP_003506459.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Meiothermus
ruber DSM 1279]
gi|290470020|gb|ADD27439.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Meiothermus
ruber DSM 1279]
Length = 338
Score = 421 bits (1084), Expect = e-116, Method: Composition-based stats.
Identities = 145/358 (40%), Positives = 200/358 (55%), Gaps = 21/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++FD+ LPP IA PRD++RLMV+ I+ + DLP +L + D +V
Sbjct: 1 MNLEDFDYHLPPELIAQSGAEPRDASRLMVIDRQTG---QITHRIFRDLPQYLRAGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N +KVI A+ E+ + W +P++ K G L F
Sbjct: 58 LNQSKVIPARTFATNPHG---TGLEVLLVREIPSGEGLWEALLKPARRAKVGSRLTFPDG 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L ATV G LL FS + + + +G +PLPPYI + D Y
Sbjct: 115 -----LFATVEAIEADGTRLLRFSGN---VWEHLENIGKMPLPPYIQA-----SVDPARY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GSVAAPTAGLHFT LL R+ +G+ + +VTLHVG GTF PV +D D H+M
Sbjct: 162 QTVYAKTPGSVAAPTAGLHFTPELLDRVRGLGVDIQYVTLHVGPGTFKPVH-DDPDRHVM 220
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWSGFTNIFITP 299
H E + TA+A+N ++ G R+++VGTT +R LETA + E G + +G T +FI P
Sbjct: 221 HLEPYEVSPQTAEAVNRARAEGRRVIAVGTTVVRTLETAYSAELGGVQAGAGETQLFIRP 280
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
G+++ +D L++NFHLPKSTLLMLVSAF G K+ YQ A++ YRFYS GD L+
Sbjct: 281 GFKYNVIDTLITNFHLPKSTLLMLVSAFMGHGLMKQAYQTAVAERYRFYSLGDAMLIL 338
>gi|304413742|ref|ZP_07395186.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Candidatus Regiella insecticola LSR1]
gi|304283833|gb|EFL92227.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Candidatus Regiella insecticola LSR1]
Length = 413
Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats.
Identities = 135/412 (32%), Positives = 205/412 (49%), Gaps = 66/412 (16%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + I+ + +D+ L + D +V
Sbjct: 1 MRVDDFSFELPGSLIAHYPHTQRSGCRLLSLDGQNGN---ITHGVFTDVLDKLQAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + ++ + + + + + SK K G L
Sbjct: 58 FNDTRVIPARLFGKKAS-----GGKLEILVERLLDKHRVLAHIKASKAPKPGTQLQLGDD 112
Query: 121 DGQ-SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ + ++ATV+ + + + + ++ + +G IPLPPYI P + D
Sbjct: 113 KSEHTAIQATVLARLD--NLFELRFDDQRDVLTILRAIGHIPLPPYI--DSPDEKSDREL 168
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y++ G+VAAPTAGLHF LL L GI++ FVTLHVGAGTF P++V++ ++H
Sbjct: 169 YQTVYSQRPGAVAAPTAGLHFDQPLLDALRKKGIEMAFVTLHVGAGTFQPIRVKNIEEHS 228
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT------------------- 280
MH+E + +A+ + K+RG R+++VGTTS+R LE+A
Sbjct: 229 MHAEYAEVPQTVVEAVLACKARGKRVIAVGTTSVRSLESAAMQRAEKNENIPFAFEAAAL 288
Query: 281 ----------------------------------TEDGIINPWSGFTNIFITPGYRFRAV 306
+ +I P+ G T IFI PGY ++ V
Sbjct: 289 LAADIRPNHVVDLRSSGRTPWPPSGNFKDCGYNPGSNALIMPFFGDTRIFIYPGYHYQIV 348
Query: 307 DILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
D L++NFHLPKSTL+MLV+AF G + T YQ AI YRF+SYGD + +
Sbjct: 349 DGLITNFHLPKSTLIMLVAAFAGYKNTMAAYQLAIEKEYRFFSYGDAMFISR 400
>gi|320450465|ref|YP_004202561.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Thermus
scotoductus SA-01]
gi|320150634|gb|ADW22012.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Thermus
scotoductus SA-01]
Length = 344
Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats.
Identities = 154/360 (42%), Positives = 199/360 (55%), Gaps = 19/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++ +D+ LP IA V PRD AR++VVH P V DLP +L+ D +V
Sbjct: 1 MSLEAYDYFLPQELIAQEGVEPRDRARMLVVHRK--GPFRAEHRQVRDLPEYLHPGDVLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN +KVI A+L R + L +P W P + K G L F S
Sbjct: 59 FNESKVIPARLLAQRP-----MGGRVEVLLVRERAPGLWEALVGPGRKAKPGTRLRFLSP 113
Query: 121 DGQ---SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
LEA V+ G LL F +L + VG +PLPPYI K P
Sbjct: 114 RDLRVVPDLEAEVVGVEEDGVRLLRFQG---DLMAHLEEVGEVPLPPYIKAKIPP----- 165
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YA+ GSVAAPTAGLHFT LL+RL +G+++ F+TLHVG GTF PVK D +
Sbjct: 166 ERYQTVYARRPGSVAAPTAGLHFTPELLARLRGMGVELRFLTLHVGPGTFRPVKG-DPEK 224
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH E I TA+A+N K G R+V+VGTT +R LE+A E + P G T +FI
Sbjct: 225 HEMHPEPYEIPEETAEAINRAKKEGRRVVAVGTTVVRALESAFREGIGVVPGMGETRLFI 284
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
P Y F+ +D L +NFHLP+STLLMLV+AF G E+T + Y+ A++ YRFYS GD L+
Sbjct: 285 RPPYAFQVIDALFTNFHLPRSTLLMLVAAFLGYEKTMEAYRLAVAERYRFYSLGDAMLIL 344
>gi|166711669|ref|ZP_02242876.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
oryzae pv. oryzicola BLS256]
Length = 367
Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats.
Identities = 142/364 (39%), Positives = 207/364 (56%), Gaps = 22/364 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +F +DLP IA P+ R ++RL+VV P P ++D V DLP L D ++
Sbjct: 12 LKKSDFHYDLPEELIAQAPLAERAASRLLVVPP---SPQALADRQVRDLPELLQPGDLLI 68
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + V SK K G ++
Sbjct: 69 FNDTRVIPARLFGQKAS-----GGRVEILIERLLGERQARVQIGASKSPKAGSLIAL--- 120
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ +A V+ + G L+ LE + G +PLPPYI R+ ++ D Y
Sbjct: 121 --DAGGQAEVLGR--DGAFYLLRFEIPTPLEHWLLAAGRLPLPPYIRREPGVE--DRERY 174
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF LL+RL G++ VTLHVGAGTF PV+V+ D H+M
Sbjct: 175 QTVFAREVGAVAAPTAGLHFDEALLARLRERGVEFGHVTLHVGAGTFQPVRVDKLDQHVM 234
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-----TTEDGIINPWSGFTNI 295
H E + A + + ++RGGR+++VGTT +R LE+A +G + P++G T I
Sbjct: 235 HKEWLNVGAALVEQVRRTRARGGRVIAVGTTVVRSLESAWRTTDAAPEGELQPFAGETQI 294
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGYR R+VD +++NFHLP+STL+M+VSAF G E + Y HAI+ YRF+SYGD L
Sbjct: 295 FILPGYRIRSVDAMVTNFHLPESTLMMMVSAFAGRERIFESYHHAIAQRYRFFSYGDAML 354
Query: 356 LFQK 359
L+ +
Sbjct: 355 LWSR 358
>gi|255037016|ref|YP_003087637.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Dyadobacter
fermentans DSM 18053]
gi|254949772|gb|ACT94472.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Dyadobacter fermentans DSM 18053]
Length = 349
Score = 421 bits (1082), Expect = e-116, Method: Composition-based stats.
Identities = 133/361 (36%), Positives = 189/361 (52%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EF FDLP S IAL P R +RLMVVH I +D+ + + D +
Sbjct: 1 MKLSEFKFDLPQSLIALHP-SDRGESRLMVVHRKTG---EIEHKTFADVINYFDDGDVMA 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
N+TKV A+L G + + +I L ++ W V P++ I+ G+ L+F
Sbjct: 57 INDTKVFPARLYGQK----EKTGAKIEVFLLRELNREMRLWDVLVDPARKIRVGNKLYF- 111
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIE--LERQISLVGTIPLPPYIARKRPIDARD 176
G S L A VID + + F G + + +G PLPP I +R +++ D
Sbjct: 112 ---GDSDLVAEVIDNTTSRGRTIRFLYDGDNDAFMKLVDELGETPLPPEIISRRKVESAD 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+QT +A+ G+VAAPTAG+HFT ++ RL G+ VTLHVG GTF V VED
Sbjct: 169 RERFQTIFAEHVGAVAAPTAGMHFTKAIMKRLEIKGVSFAPVTLHVGLGTFRTVDVEDLT 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H SE I TA+ +N RI +VGTTSLR +E++ + G + P G+T+ F
Sbjct: 229 KHKTDSENYRITQSTAEVVNKAIDGKKRICAVGTTSLRAIESSVSASGHLKPVEGWTDKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ P Y F+ + L+SNF LP+S LLM AF G + K Y AI Y+F++YGD L+
Sbjct: 289 VFPPYDFKIANALLSNFQLPESILLMAACAFGGFDLVMKAYDIAIKEKYKFFTYGDAMLI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|88812647|ref|ZP_01127894.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Nitrococcus
mobilis Nb-231]
gi|88790063|gb|EAR21183.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Nitrococcus
mobilis Nb-231]
Length = 347
Score = 421 bits (1082), Expect = e-115, Method: Composition-based stats.
Identities = 138/360 (38%), Positives = 194/360 (53%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP IA P+ R ++RL+V+ D L L D +V
Sbjct: 1 MRVSDFHFELPDELIASTPLPERTASRLLVIDAATGAC---QDRRFDALVELLRRGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L GV+ + L + +S V+ R +K + G L
Sbjct: 58 VNDTRVIPARLYGVKES-----GGRVEVLLERLLDAHSALVHVRANKAPRPGTRLWL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ L A V+ + GE+ + + L + G +PLPPY+ +R D Y
Sbjct: 110 --EEALPALVLGR--QGELYRLRFETTEPLLELLERYGHVPLPPYL--RRADTPVDRERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A G+VAAPTAGLHF LL RL G+ VTLHVGAGTF P++ E + H M
Sbjct: 164 QTVFAARPGAVAAPTAGLHFDQALLQRLAQKGVAQARVTLHVGAGTFQPLRTERVEQHQM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E +D+ + +++GGR+V+VGTT +R LETA G + P+ G T++FI PG
Sbjct: 224 HAEYLEVDSAVCARVAQTRAQGGRVVAVGTTVVRALETAARS-GALQPYRGETDLFIYPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRFR VD L++NFHLP S+LLMLV AF G E Y+HA++ YRFYSYGD + +
Sbjct: 283 YRFRTVDALITNFHLPGSSLLMLVCAFAGREPVLSAYRHAVAARYRFYSYGDAMFIHPAQ 342
>gi|288940036|ref|YP_003442276.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Allochromatium vinosum DSM 180]
gi|288895408|gb|ADC61244.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Allochromatium vinosum DSM 180]
Length = 343
Score = 421 bits (1082), Expect = e-115, Method: Composition-based stats.
Identities = 137/359 (38%), Positives = 206/359 (57%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F ++LP IA P+ R +RL+V+ + + P D + +DLP+ L +D ++
Sbjct: 1 MRRSDFHYELPAELIAQHPLPERSGSRLLVLDGSQTPP---RDRMFTDLPSLLKPHDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+V+ A+L G + ++ + + + R SK K G +
Sbjct: 58 FNNTQVMRARLFGHKE-----TGGQVEILIERLLDAREALAHVRASKSPKPGSRIRVTDG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
A + G++ + ++ + Q++ G +PLPPYI +RP D D Y
Sbjct: 113 -------AWLSVVGREGDLFRLRALE-SDFGEQMARHGHMPLPPYI--QRPDDVLDESRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTA LHF +L+RL ++G+ +TLHVGAGTF PV+ +D + H M
Sbjct: 163 QTVFARRTGAVAAPTAALHFDEPMLARLDALGVARAEITLHVGAGTFQPVREDDLERHHM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE +D + + + GGR+++VGTTS+R LETA DG + P+ G + +FI PG
Sbjct: 223 HSEWLEVDETVCERIERTRQLGGRVIAVGTTSVRSLETAAA-DGRLRPFRGESRLFIRPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRFR VD +++NFHLP+STLLMLV+AF G E K Y+HAI YRF+SYGD L ++
Sbjct: 282 YRFRVVDAMITNFHLPESTLLMLVAAFSGYSEIMKAYRHAIDQRYRFFSYGDAMFLTRQ 340
>gi|91774778|ref|YP_544534.1| S-adenosylmethionine [Methylobacillus flagellatus KT]
gi|91708765|gb|ABE48693.1| S-adenosylmethionine [Methylobacillus flagellatus KT]
Length = 344
Score = 421 bits (1082), Expect = e-115, Method: Composition-based stats.
Identities = 138/359 (38%), Positives = 207/359 (57%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P R +RL+ + N ++D L DLP + D +
Sbjct: 3 MRTNDFDFFLPDELIAQFPAKERRGSRLLHLDGNTG---QVNDRLFLDLPDLVEPGDLFI 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L+G + +I + + P + R S+ K G IL
Sbjct: 60 FNDTRVIKARLHGEKLS-----GGKIEVLVERVLGPFEALAHIRASRAPKPGSILRIADA 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
EA ++ + + + + + + L + G++PLPPYI ++ D Y
Sbjct: 115 -----FEAEMLGRQDD--LFHLRILGDLPLLDLLEQHGSLPLPPYITHD--AESTDEERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF + +L L +G+ + +VTLHVGAGTF PV+V++ +H M
Sbjct: 166 QTVYAREPGAVAAPTAGLHFDNAMLDGLKRLGVNIAYVTLHVGAGTFQPVRVDNISEHKM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE+ + T ++ ++ GG++ +VGTT+LR LE+A + G + G T+IFITPG
Sbjct: 226 HSELYSVPQHTVDMIHQTRATGGKVTAVGTTALRALESAA-QPGTLQAGQGETDIFITPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRF+ V+ L++NFHLPKSTLLMLVSAF G+E + Y HA++ YRF+SYGD L+ ++
Sbjct: 285 YRFQVVERLLTNFHLPKSTLLMLVSAFAGVEHIRNAYAHAVTARYRFFSYGDAMLIERQ 343
>gi|329963282|ref|ZP_08300995.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
fluxus YIT 12057]
gi|328528821|gb|EGF55765.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
fluxus YIT 12057]
Length = 352
Score = 421 bits (1082), Expect = e-115, Method: Composition-based stats.
Identities = 122/363 (33%), Positives = 190/363 (52%), Gaps = 15/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P RD +RL+V+H I + D+ + + D V
Sbjct: 1 MKLSQFKFKLPEEKIALHPAKYRDESRLLVLHRKTG---EIEHRMFKDILDYFDDKDVFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK----EKTGARIEVFLLRELNEELRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDARD 176
D + A VID + L F G E ++ + +G PLP I RP++ D
Sbjct: 114 DDD---SMVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYALGETPLPHSIV-NRPVEPED 169
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+Q+ +A+ +G+V APTA LHF+ L+ R+ GI ++TLH G G F + VED
Sbjct: 170 SERFQSIFARNEGAVTAPTASLHFSRELMKRMEIKGIDFAYITLHAGLGNFRDIDVEDLT 229
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H SE +++ + +N K ++ +VGTT +R +E+ + DG + + G+TN F
Sbjct: 230 KHKTDSEQMIVNSEAVKIVNHAKDINKQVCAVGTTVMRAIESTVSTDGHLKEYEGWTNKF 289
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + ++SNFH+P STLLM+V+AF G E+ + Y A+ YRF +YGD L+
Sbjct: 290 IFPPYDFTVANAMVSNFHMPLSTLLMIVAAFGGYEQVMEAYNVALKEDYRFGTYGDAMLI 349
Query: 357 FQK 359
+
Sbjct: 350 TDR 352
>gi|284036095|ref|YP_003386025.1| S-adenosylmethionine/ tRNA-ribosyltransferase-isomerase [Spirosoma
linguale DSM 74]
gi|283815388|gb|ADB37226.1| S-adenosylmethionine/ tRNA-ribosyltransferase-isomerase [Spirosoma
linguale DSM 74]
Length = 347
Score = 421 bits (1082), Expect = e-115, Method: Composition-based stats.
Identities = 136/361 (37%), Positives = 190/361 (52%), Gaps = 18/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EF FDLP S IA PV R +RLMVV I SD+ ++ D +V
Sbjct: 1 MKLSEFKFDLPESLIAKYPVE-RGESRLMVVDRK---AKTIEHKQFSDMLSYFGDGDVMV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
NNTKV A+L G + + +I L ++ W V P++ I+ G+ L+F
Sbjct: 57 INNTKVFPARLYGNK----EKTGAKIEVFLLRELNREMKLWDVLVDPARKIRVGNKLYF- 111
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
G S L A VID + + F G E + + +G P+P R + D
Sbjct: 112 ---GDSDLVAEVIDNTTSRGRTIRFLFDGNHEEFMKAVDELGETPIPR--EMNREAEDAD 166
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT +A+ G+VAAPTAGLHFT ++ R+ GI VTLHVG GTF V VED
Sbjct: 167 RDAYQTVFAQHVGAVAAPTAGLHFTRAMMKRMEIKGINFAPVTLHVGLGTFRQVDVEDLT 226
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H SE I +AQ +N G R+ +VGTTSL+ +E++ + + + P G+T+ F
Sbjct: 227 KHKTDSENYRIPEDSAQIVNKALDAGKRVCAVGTTSLKAIESSVSANSRLKPVEGWTDRF 286
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F+ + L+++ HLP+S L+M+ SAF G E K+ YQ AI YRF+SYGD L+
Sbjct: 287 IFPPYDFKIANSLLTSLHLPESILIMMTSAFGGHELIKEAYQVAIKEKYRFFSYGDAMLI 346
Query: 357 F 357
Sbjct: 347 I 347
>gi|316934200|ref|YP_004109182.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Rhodopseudomonas palustris DX-1]
gi|315601914|gb|ADU44449.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Rhodopseudomonas palustris DX-1]
Length = 360
Score = 421 bits (1082), Expect = e-115, Method: Composition-based stats.
Identities = 192/362 (53%), Positives = 245/362 (67%), Gaps = 11/362 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M FDFDLP IALRPV PRD+AR++VV P + D +V DLPA L D +V
Sbjct: 1 MRTDLFDFDLPAGNIALRPVSPRDAARMLVVRPG----APLEDRIVRDLPALLAPGDQLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI AQL G R E +I TL R+ W +P+K + GD++ F
Sbjct: 57 VNDTRVIAAQLAGHRIGRGP--EPKIDATLIKRLDGARWQALVKPAKKLVPGDVVRF-GH 113
Query: 121 DGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
DG+ L+ATV K GEI L FS G L++ I+ +G PLPPYIA KRP D +D
Sbjct: 114 DGRVCLLGHLDATVEAKGEAGEITLAFSFHGPVLDQAIAEIGATPLPPYIASKRPPDVQD 173
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT +A +G+VAAPTAGLHFT++L + L + G+ ++ +TLHVGAGTF+PVK EDT
Sbjct: 174 VADYQTMFAANEGAVAAPTAGLHFTADLEAALAARGVGLHRITLHVGAGTFLPVKAEDTA 233
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+H MH+E G I TA+ALN+ ++ GGRIV+VGTTSLRLLE+A +DG I ++ T+IF
Sbjct: 234 EHKMHAEWGTISRATAEALNAARAAGGRIVAVGTTSLRLLESAARDDGRIAAFADETSIF 293
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFRAVD+LM+NFHLP+STL MLVSAFCG++ + Y HAI YRFYSYGD SLL
Sbjct: 294 ITPGYRFRAVDVLMTNFHLPRSTLFMLVSAFCGLDTMQAAYAHAIRTGYRFYSYGDASLL 353
Query: 357 FQ 358
F+
Sbjct: 354 FR 355
>gi|23016644|ref|ZP_00056398.1| COG0809: S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
(queuine synthetase) [Magnetospirillum magnetotacticum
MS-1]
Length = 345
Score = 421 bits (1082), Expect = e-115, Method: Composition-based stats.
Identities = 182/358 (50%), Positives = 232/358 (64%), Gaps = 16/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDF+LP IA RPV PRDSARL+ V +SD V DLP L D +V
Sbjct: 1 MRVDDFDFELPRELIAERPVCPRDSARLLHVPIIGG----LSDRGVRDLPDLLMPGDILV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI A+L G R + TLH R W +ARP+K ++ GD + F
Sbjct: 57 FNDTKVIPARLFGRR------GTAGVEVTLHQRTGLAQWKAFARPAKKLRPGDRVDFAEG 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
ATV +K GE+ L F SG +L + G++PLPPYI RK D RD DY
Sbjct: 111 -----FFATVAEKGEMGEVTLDFDRSGEDLMVALEAFGSLPLPPYI-RKGEADERDRGDY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +G+VAAPTAGLHFT +LL+ L + G+K VTLHVGAGTF+PVK +DT+DH M
Sbjct: 165 QTVFARQKGAVAAPTAGLHFTPDLLAALDARGVKRATVTLHVGAGTFLPVKADDTNDHRM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H EIG I TA A+N+ K+ GGR+V+VGTTS RLLE+A GI++P+ G T+IFITPG
Sbjct: 225 HQEIGVITPETAAAINAAKAAGGRVVAVGTTSARLLESAADPLGILHPFDGATDIFITPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+ FR D+L++NFHLP+STL MLVSAF G+ K+ Y+HA + YRFYSYGD LL +
Sbjct: 285 HSFRLADVLLTNFHLPRSTLFMLVSAFSGLSRMKEAYEHAKAAGYRFYSYGDCCLLER 342
>gi|58582108|ref|YP_201124.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
oryzae pv. oryzae KACC10331]
gi|58426702|gb|AAW75739.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
oryzae pv. oryzae KACC10331]
Length = 394
Score = 420 bits (1081), Expect = e-115, Method: Composition-based stats.
Identities = 141/364 (38%), Positives = 206/364 (56%), Gaps = 22/364 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +F +DLP IA P+ R ++RL+VV P P ++D DLP L D ++
Sbjct: 39 LKKSDFHYDLPEELIAQAPLAERAASRLLVVPP---SPQALADRRARDLPELLQPGDLLI 95
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + V SK K G ++
Sbjct: 96 FNDTRVIPARLFGQKAS-----GGRVEILIERLLGERQARVQIGASKSPKAGSLIAL--- 147
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ +A V+ + G L+ LE + G +PLPPYI R+ ++ D Y
Sbjct: 148 --DAGGQAEVLGR--DGAFYLLRFEIPTPLEHWLLEAGRLPLPPYIRREPGVE--DRERY 201
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF LL+RL G++ VTLHVGAGTF PV+V+ D H+M
Sbjct: 202 QTVFAREVGAVAAPTAGLHFDEALLARLRERGVEFGHVTLHVGAGTFQPVRVDKLDQHVM 261
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-----TTEDGIINPWSGFTNI 295
H E + A + + ++RGGR+++VGTT +R LE+A +G + P++G T I
Sbjct: 262 HKEWLNVGAALVEQVRRTRARGGRVIAVGTTVVRSLESAWRTTDAAPEGELQPFAGETQI 321
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGYR R+VD +++NFHLP+STL+M+VSAF G E + Y HAI+ YRF+SYGD L
Sbjct: 322 FILPGYRIRSVDAMVTNFHLPESTLMMMVSAFAGRERIFEAYHHAIAQRYRFFSYGDAML 381
Query: 356 LFQK 359
L+ +
Sbjct: 382 LWSR 385
>gi|262371662|ref|ZP_06064941.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter junii SH205]
gi|262311687|gb|EEY92772.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter junii SH205]
Length = 345
Score = 420 bits (1081), Expect = e-115, Method: Composition-based stats.
Identities = 137/359 (38%), Positives = 193/359 (53%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F FDLP IA P+ R ++RL+ + DH +D+ LN D +V
Sbjct: 1 MQLSDFSFDLPDELIARYPLESRSASRLLHID----DQGHYHDHSFTDILDLLNEGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G R I + + ++ + + S K G L+
Sbjct: 57 LNDTKVMKARLKGKRA-----TGGAIEVLVERMLDTHTAHCHIKSSNSPKAGAELYI--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ + TV + L V S L + G +P+PPY R+ + D Y
Sbjct: 109 -GEDSVPVTVQGRHEN---LFVVEFSQPIL-SILDQYGQLPIPPYFNRE--AEEIDTERY 161
Query: 181 QTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
QT + + SVAAPTA LHF +LL +L + G++ FVTLHVGAGTFMPV+ D +H
Sbjct: 162 QTVFHDPEKIASVAAPTASLHFDQDLLEKLAAKGVQKTFVTLHVGAGTFMPVRTTDITNH 221
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFI 297
IMHSE + T + K+RG ++++VGTT+ R LE+A DG I W+G T IFI
Sbjct: 222 IMHSEWCDVPQSTIDLILETKARGNKVIAVGTTATRALESAAQANDGKIAAWTGDTQIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+F VD L++NFHLP+STLLMLVSA + Y+HA+ YRF+SYGD L+
Sbjct: 282 YPGYQFCIVDRLITNFHLPESTLLMLVSALSNRDNILSAYEHAVKERYRFFSYGDAMLI 340
>gi|253700404|ref|YP_003021593.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Geobacter
sp. M21]
gi|251775254|gb|ACT17835.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Geobacter
sp. M21]
Length = 341
Score = 420 bits (1081), Expect = e-115, Method: Composition-based stats.
Identities = 144/358 (40%), Positives = 205/358 (57%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD++LPP IA P RD++RL+ + + + + V+ + A D +V
Sbjct: 1 MFLSDFDYELPPELIAQHPASRRDASRLLTLDRSNGA---VGEATVASIAAQFLPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV--SPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+LNG + + L RV P WS + SK K G +
Sbjct: 58 LNDTRVIPARLNGHKES-----GGAVEIFLVRRVPGDPECWSCLIKASKSPKNGCRVLL- 111
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ ATV+++ + G+ ++F S + + G++PLPPYI KR + D
Sbjct: 112 ----PGGVTATVLER-DGGDWRVLFEGS-DDFMGWLEATGSMPLPPYI--KRNPEGEDLE 163
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT +A+ +G+VAAPTAGLHFT +L + G+++ VTLHVG GTFMP++VED +H
Sbjct: 164 RYQTVFAREKGAVAAPTAGLHFTPEILDEIRGRGVEIVSVTLHVGLGTFMPIRVEDLSEH 223
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH E+ I TA A+ K RGGR+V++GTTSLR LE A G + +IFI
Sbjct: 224 TMHRELYRIPRETAAAIRRTKERGGRVVALGTTSLRALEHAAAS-GEVAAGEREADIFIL 282
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGYRFR VD L++NFHLPKSTL MLV AF G E + Y+ A+S +RF+SYGD +
Sbjct: 283 PGYRFRVVDALITNFHLPKSTLFMLVCAFAGKEAVLEAYREAVSRRFRFFSYGDAMFI 340
>gi|282889609|ref|ZP_06298150.1| hypothetical protein pah_c002o060 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281500532|gb|EFB42810.1| hypothetical protein pah_c002o060 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 345
Score = 420 bits (1081), Expect = e-115, Method: Composition-based stats.
Identities = 147/356 (41%), Positives = 192/356 (53%), Gaps = 17/356 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ + FDLP IA P PRD +RLMVV I +L FL D+++F
Sbjct: 7 HLSSYHFDLPQELIAQHPCTPRDHSRLMVVDRGSGILSEI---PFYELADFLQKGDSLIF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNTKVI A+L G R + L + S +W V +P K + G + F
Sbjct: 64 NNTKVIPARLLGKRL-----TGGQAEVFLKAQRSDGTWEVLVKPGKQLGLGSKVIF---- 114
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
++D G + F G + + + G IPLP YI R+ P D YQ
Sbjct: 115 -SETFFCEIVDVLPEGARCVRFFHEG-DFNQVLEQHGKIPLPKYIKRE-PDVKEDGERYQ 171
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YA G+VAAPTAGLHFT LL+R+ S G++ VTLHVG GTF+P+KVED DH MH
Sbjct: 172 TVYAAHPGAVAAPTAGLHFTQPLLNRITSKGVERIEVTLHVGLGTFLPIKVEDIRDHQMH 231
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E I AQ LN+ GR + +GTTS R LE+A II P T+IFI+PGY
Sbjct: 232 DESFLISVQAAQQLNNP--SSGRQICIGTTSCRALESAAGHSSIIQPGEYSTDIFISPGY 289
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+FR + L++NFHLP S+LL+LVS F G E ++ YQ A+ +RFYSYGD L+
Sbjct: 290 QFRKMQALLTNFHLPCSSLLVLVSTFAGHELIREAYQKAVKEKFRFYSYGDAMLIL 345
>gi|270308109|ref|YP_003330167.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase
[Dehalococcoides sp. VS]
gi|270154001|gb|ACZ61839.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase
[Dehalococcoides sp. VS]
Length = 343
Score = 420 bits (1081), Expect = e-115, Method: Composition-based stats.
Identities = 143/359 (39%), Positives = 204/359 (56%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LP IA +P PRDS+RL+V++ ++ + ++ + D +V
Sbjct: 1 MKTSDFDYKLPQEYIAQKPAEPRDSSRLLVLNRQRG---ELTSRIFGEITEYFKPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN++V+ A++ G++ +I L R N W +P K K G I+
Sbjct: 58 MNNSRVLPARIKGIK----RDTAAKIEILLLKRDGDNCWEALLKPGKRTKPGTIIDIHQH 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
++ +A V+ + G LL FS E + +G +PLPPYI Y
Sbjct: 114 GEETSTQAEVLADKDDGIKLLRFSD-----ETHLMKLGEVPLPPYIHTPVSN----PERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA GSVAAPTAGLHFT++LL RL IG+ +VTLH+G TF PVK ED DHI+
Sbjct: 165 QTVYALTNGSVAAPTAGLHFTTDLLKRLSEIGVICTYVTLHIGLDTFRPVKEEDPKDHII 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
H E G + A TA A+ K+ G R+ VGT++ RL+E A+ +++GII P+S + ++FI
Sbjct: 225 HREYGILSAETAAAICQAKANGKRVFCVGTSATRLVEQASSLSQNGIIEPYSDWADLFIL 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+FR VD ++NFHLP+ST LML +AF G KK Y+ AI YRFYS+GD L+
Sbjct: 285 PGYKFRVVDCFITNFHLPRSTPLMLTAAFAGWPFLKKAYEKAIHEHYRFYSFGDAMLVL 343
>gi|192360885|ref|YP_001981943.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cellvibrio
japonicus Ueda107]
gi|190687050|gb|ACE84728.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cellvibrio
japonicus Ueda107]
Length = 364
Score = 420 bits (1081), Expect = e-115, Method: Composition-based stats.
Identities = 134/364 (36%), Positives = 192/364 (52%), Gaps = 23/364 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F ++LP IA P R +RL+ + + DL +N D +V
Sbjct: 5 MRRQDFYYELPDHLIARVPASERRGSRLLQLDGATGARV---HGQFPDLLDLVNPGDLMV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + + + +S + R SK K + Q
Sbjct: 62 FNNTRVIPARLFGQKA-----TGGAVEILVERVLSDKRVLAHTRASKAPKVDSQVIL--Q 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DG S + D E L + + +G +PLPPYI R ++ D Y
Sbjct: 115 DGTSVILRARQDALFEWEFL-----TDQSALEVMEQIGHMPLPPYIDRADAVE--DRERY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y + QG+VAAPTAGLHF +L +L G+++ FVTLHVGAGTF ++V++ +H M
Sbjct: 168 QTVYGEKQGAVAAPTAGLHFDELMLQQLRDKGVQIAFVTLHVGAGTFQNMRVDNIREHKM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT------EDGIINPWSGFTN 294
H EI + + + + K+ G R+V+VGTTS+R LE+A G I P+ G T+
Sbjct: 228 HGEIMEVSPEVCELVRATKAAGKRVVAVGTTSVRSLESAAHGYLDPVHKGSIQPYRGETS 287
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PGY F+ VD L++NFHLP+STL+MLVSAF G T Y A++ YRF+SYGD
Sbjct: 288 IFIYPGYTFQVVDALVTNFHLPESTLIMLVSAFAGYSHTMAAYADAVARQYRFFSYGDAM 347
Query: 355 LLFQ 358
+ +
Sbjct: 348 FITR 351
>gi|254487456|ref|ZP_05100661.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseobacter
sp. GAI101]
gi|214044325|gb|EEB84963.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseobacter
sp. GAI101]
Length = 358
Score = 420 bits (1081), Expect = e-115, Method: Composition-based stats.
Identities = 169/361 (46%), Positives = 223/361 (61%), Gaps = 14/361 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FDFDLP + IA RP PR SARL+V V+ D +V+DLP +L + D +V
Sbjct: 5 LKLSDFDFDLPEALIATRPAVPRTSARLLVADG-----PVLHDKVVTDLPDWLRAGDRLV 59
Query: 61 FNNTKVITAQLNGVRF--CHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L G R + I TL S +W+ +P K +K G+ + F
Sbjct: 60 LNDTRVIPARLTGARHRDSAQGPVQARIEITLLEPRSDGTWAALIKPLKKLKVGEDVVFS 119
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
L AT+I + G+ L F+ +G + + ++ G +PLPPYIA KRP DA+D
Sbjct: 120 PD-----LRATLIGTAD-GQGHLQFNCAGDDFDAALNAAGAMPLPPYIAAKRPADAQDLT 173
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LL L G+ VTLHVGAGTF+PVKV+D DH
Sbjct: 174 DYQTVFARNLGAVAAPTASLHFDDALLQTLADKGVTFSHVTLHVGAGTFLPVKVDDIADH 233
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE G + A A + + K+ GGR++ VGTT+LRL+ETA G I W G T+IFIT
Sbjct: 234 KMHSEWGKVSAQAAAEIAATKAAGGRVIPVGTTALRLVETAAR-GGTIKAWEGDTDIFIT 292
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ F D LM+NFHLPKSTL+MLV+A G E K +Y HAIS YRF+SYGD SLL
Sbjct: 293 PGFTFNVADALMTNFHLPKSTLMMLVAALMGQEAIKTLYAHAISSNYRFFSYGDASLLIP 352
Query: 359 K 359
+
Sbjct: 353 E 353
>gi|149178742|ref|ZP_01857325.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Planctomyces maris DSM 8797]
gi|148842440|gb|EDL56820.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Planctomyces maris DSM 8797]
Length = 351
Score = 420 bits (1080), Expect = e-115, Method: Composition-based stats.
Identities = 142/358 (39%), Positives = 202/358 (56%), Gaps = 13/358 (3%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FD+ LPP IA P RD +RL+++ I+ +SDLP +LN +D +V N
Sbjct: 4 LNDFDYQLPPELIATEPTQQRDQSRLLILDRKSQS---ITHGSISDLPRYLNPDDCLVLN 60
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ-- 120
NT+V++A+L G R + S W + ++ + GDI+
Sbjct: 61 NTRVLSARLFGTRQS----TGGKWEGLYLGSNSLGEWKLMSKTRGKLNPGDIIELRPAHQ 116
Query: 121 -DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ ++ ++ K G + + ++ GT+PLPPY+ R + D+
Sbjct: 117 RSLEKQVTLKLLSKDTEGYWTALVKSD-EDHHSLLAHFGTMPLPPYMKRNLATE-EDWER 174
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA G+VAAPTAGLHFT LL R + G ++ VTLHVG GTF P+ VE + H
Sbjct: 175 YQTVYAAQPGAVAAPTAGLHFTPELLERCTAQGTRIANVTLHVGIGTFKPISVETLEAHK 234
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE + A +A+ LN + +GGRIV VGTTS+R LE+ + G + W G T+IFI P
Sbjct: 235 MHSEWCELSAESAELLNQSRQQGGRIVCVGTTSVRTLES-VAQQGPLQAWQGETDIFIYP 293
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+AVD L++NFHLPKSTLL+LVSAF G E + Y+ A+ YRFYSYGD L+
Sbjct: 294 PYQFQAVDCLLTNFHLPKSTLLVLVSAFAGAEFICEAYKKAVEAEYRFYSYGDAMLIL 351
>gi|224537235|ref|ZP_03677774.1| hypothetical protein BACCELL_02112 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521158|gb|EEF90263.1| hypothetical protein BACCELL_02112 [Bacteroides cellulosilyticus
DSM 14838]
Length = 352
Score = 420 bits (1080), Expect = e-115, Method: Composition-based stats.
Identities = 124/363 (34%), Positives = 188/363 (51%), Gaps = 15/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P RD +RLMV+H I D+ + + D +
Sbjct: 1 MKLSQFKFKLPEEKIALHPTKYRDESRLMVLHRKTG---EIEHKEFKDVLNYFDDKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK----EKTGARIEVFLLRELNEELRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDARD 176
D + A VID + L F G E ++ + +G PLP I RP++A D
Sbjct: 114 DDD---SMVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYALGETPLPHSII-NRPVEAED 169
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+Q+ +A+ +G+V APTA LHF+ L+ RL GI ++TLH G G F + VED
Sbjct: 170 SERFQSIFARNEGAVTAPTASLHFSRELMKRLEIKGIDFAYITLHAGLGNFRDIDVEDLT 229
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H SE ++ +N K ++ +VGTT +R +E+ + DG + + G+TN F
Sbjct: 230 KHKTDSEQMIVNEEAVGIVNRAKDLNRQVCAVGTTVMRAIESTVSTDGHLKAYEGWTNKF 289
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + ++SNFH+P STLLM+V+AF G ++ + Y A+ YRF +YGD L+
Sbjct: 290 IFPPYDFTVANAMISNFHMPLSTLLMIVAAFGGYDQVMEAYNVALKEGYRFGTYGDAMLI 349
Query: 357 FQK 359
K
Sbjct: 350 TDK 352
>gi|328947936|ref|YP_004365273.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Treponema
succinifaciens DSM 2489]
gi|328448260|gb|AEB13976.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Treponema
succinifaciens DSM 2489]
Length = 346
Score = 420 bits (1080), Expect = e-115, Method: Composition-based stats.
Identities = 131/358 (36%), Positives = 194/358 (54%), Gaps = 15/358 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F+FDLP IA +P R + +LM + + + + + DL + +V
Sbjct: 1 MKTSDFNFDLPEELIAQKPSGIRGNDKLMFLDKSTGK---VFHYAMKDLVDLVEPGTLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FNN+KV ++ G++ +E + SP N W+ + +K +K G++ F
Sbjct: 58 FNNSKVRRSRCYGIK----TDTGREQEFMFLNQTSPEGNIWNTMVKGAKKVKPGNVYKFP 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
V D N G E G IPLPPYI R+ D D
Sbjct: 114 DGSEGK----IVSDSKNDGTEFRFIEFPFRLTEVWFEKNGHIPLPPYIRRE--DDDTDSE 167
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YAK GS A PTAGLHFT +L +L + + ++TLHVG GTF+PV+ ++ ++H
Sbjct: 168 RYQTIYAKETGSAACPTAGLHFTEFVLEKLKEKNVDLEWITLHVGLGTFLPVRADNIEEH 227
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH E + A+ +NS K G +++VGTTS+R LE+A+ E+GI++ + TNIF+
Sbjct: 228 KMHEEFYTVPYDVAEKINSAKKEGRPVLAVGTTSVRTLESASDENGIVHGGTRSTNIFMY 287
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+F+ VD + +NFH P+STL+MLVSAF G E Y+ A+ + YRF+SYGD L+
Sbjct: 288 PGYKFKVVDQMFTNFHTPESTLIMLVSAFAGRENILNAYKIAVENRYRFFSYGDAMLI 345
>gi|134093583|ref|YP_001098658.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Herminiimonas arsenicoxydans]
gi|166216726|sp|A4G1Z2|QUEA_HERAR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|133737486|emb|CAL60529.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein QueA) [Herminiimonas
arsenicoxydans]
Length = 341
Score = 420 bits (1080), Expect = e-115, Method: Composition-based stats.
Identities = 141/356 (39%), Positives = 193/356 (54%), Gaps = 22/356 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LP IA P+ R ++RL+ V + D +D+ LN D +VFN
Sbjct: 4 LSDFDFELPQELIAQTPLAERSASRLLHV-----AQDGMIDRAFADIVDLLNPGDLLVFN 58
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+V+ A+ GV+ ++ + + R SK G +
Sbjct: 59 DTRVLKARFFGVKE-----TGGKVEVLVERVIDSAHVHAQIRASKSPVPGMKIRLADAFD 113
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
VI GE + ++ I G +PLPPYI DA D YQT
Sbjct: 114 -------VIVGERAGEFYELQFPG--DIFALIEAHGRLPLPPYIEH--AADAYDETRYQT 162
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YAK G+VAAPTAGLHF LL L + G++ +VTLHVGAGTF PV+ E+ +H MHS
Sbjct: 163 VYAKTPGAVAAPTAGLHFDQALLDTLKAKGVQFAYVTLHVGAGTFQPVRNENLAEHNMHS 222
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I T A+++ ++ G IV+VGTTS+R LE+A ++ G + S T +FITPGY
Sbjct: 223 EWYTISQETVGAVHAAQAAGHNIVAVGTTSMRALESA-SQSGSLQAGSADTRLFITPGYT 281
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F+ V L++NFHLPKSTLLMLVSAF G + + YQHAIS YRF+SYGD L +
Sbjct: 282 FKTVTRLITNFHLPKSTLLMLVSAFAGYDAIRAAYQHAISQRYRFFSYGDAMFLTR 337
>gi|152980695|ref|YP_001352040.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Janthinobacterium sp. Marseille]
gi|166216727|sp|A6SUU3|QUEA_JANMA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|151280772|gb|ABR89182.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Janthinobacterium sp. Marseille]
Length = 341
Score = 420 bits (1080), Expect = e-115, Method: Composition-based stats.
Identities = 139/356 (39%), Positives = 194/356 (54%), Gaps = 22/356 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF+LP IA P+ R ++RL+ V P ++D + + L+ D +VFN
Sbjct: 4 LSDFDFELPQELIAQTPLAERSASRLLQVLPE-----QMTDRNFAYIVDLLSPGDLLVFN 58
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+V+ A+ G++ ++ + + + R SK G +
Sbjct: 59 DTRVLKARFFGIKE-----TGGKVEVLVERVIDQRNVHAQIRASKSPAVGMRIRLADAFD 113
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
VI GE + ++ I G +PLPPYI DA D YQT
Sbjct: 114 -------VIVGERAGEFYELQFPD--DVFELIEAHGRLPLPPYIEH--AADAYDETRYQT 162
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YAK G+VAAPTAGLHF LL L + G+K+ ++TLHVGAGTF PV+ E+ +H MHS
Sbjct: 163 VYAKTPGAVAAPTAGLHFDQALLDALTAKGVKLAYITLHVGAGTFQPVRNENLAEHNMHS 222
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I T + + + GG IV+VGTTS+R LE+A ++ G + S T +FITPGY
Sbjct: 223 EWYTISQQTVDLVKATQVAGGNIVAVGTTSMRALESA-SQSGSLQAGSADTRLFITPGYT 281
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F+ V L++NFHLPKSTLLMLVSAF G + + YQHAIS YRF+SYGD L +
Sbjct: 282 FKTVTRLITNFHLPKSTLLMLVSAFAGYDTIRAAYQHAISQRYRFFSYGDAMFLTR 337
>gi|269926046|ref|YP_003322669.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermobaculum terrenum ATCC BAA-798]
gi|269789706|gb|ACZ41847.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermobaculum terrenum ATCC BAA-798]
Length = 336
Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats.
Identities = 145/360 (40%), Positives = 205/360 (56%), Gaps = 27/360 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++FD+ LPP IA P PRDS+RL+V++ I + DLP +L+ D +V
Sbjct: 1 MRLQDFDYYLPPELIAQTPAEPRDSSRLLVLNKRTG---EIQHAIFRDLPNYLSPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L+G R + + L V W RP++ +K G+ +
Sbjct: 58 FNDTRVIPARLHGRR----KQTGGNVEFLLVRHVKDTEWEAMGRPARRLKTGERVTIAED 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L+A V++K G +L+ E+ + G IPLPPYI D Y
Sbjct: 114 -----LDAQVLEKLPEGLLLIRLPQ---EVHENLDKYGEIPLPPYIHDFHG----DASRY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHFT L+SRL G+ + F+TLHVG GTF P+K E ++H M
Sbjct: 162 QTVYARDPGAVAAPTAGLHFTEELISRLRDYGVDLRFITLHVGPGTFQPIKTERIEEHKM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSG---FTNIFI 297
HSE +I + L +S G R+V+VGTTS+R LE A + +G T++FI
Sbjct: 222 HSERYYIPEGLLEYLEEKRSAGNRVVAVGTTSVRALEDAA-----VRRQAGTWVETDLFI 276
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+F+ VD L++NFHLPKSTL+MLV+A G E Y+ A+ + YRFYS+GD L+
Sbjct: 277 KPGYQFKIVDALITNFHLPKSTLMMLVAATGGYEHIMNAYRIAVENRYRFYSFGDAMLII 336
>gi|84503044|ref|ZP_01001140.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Oceanicola
batsensis HTCC2597]
gi|84388588|gb|EAQ01460.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Oceanicola
batsensis HTCC2597]
Length = 348
Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats.
Identities = 165/360 (45%), Positives = 224/360 (62%), Gaps = 14/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RP PR SARL+V + I D +V DL +L D +V
Sbjct: 1 MKLSDFDFDLPEGLIATRPARPRSSARLLVAEGD-----AIHDAVVRDLTDWLRPGDRLV 55
Query: 61 FNNTKVITAQLNGVRF--CHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L G R E I TL + W+ +P K +++G+++ F
Sbjct: 56 LNDTRVIPARLAGKRARDSDQGPTEARIDVTLLEPRASGHWAALIKPLKKVREGEVIRF- 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
S D +RL + G+ LL F++ G + +R ++ G +PLPPYIA RP D RD
Sbjct: 115 SDDLSARLTGR-----DEGQGLLEFNLKGEDFDRALAEAGAMPLPPYIAAMRPPDDRDKD 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF + LL R+ +G+++ VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVWARRSGAVAAPTASLHFDAPLLDRIAGMGVEMTHVTLHVGAGTFLPVKVEDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A A + + ++ GGRI+ VGTT+LRL+E+A G I PW G T+IFI
Sbjct: 230 RMHAEWGEVTAQAADEIAATRAGGGRIIPVGTTALRLIESAARS-GQIGPWRGETDIFIY 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ FR D LM+NFHLP+STL+MLVSA G E + +Y HA++ YRF+SYGD SLL
Sbjct: 289 PGFEFRVTDALMTNFHLPRSTLMMLVSALMGQERIRSVYDHAVARKYRFFSYGDASLLIP 348
>gi|84624010|ref|YP_451382.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
oryzae pv. oryzae MAFF 311018]
gi|188576285|ref|YP_001913214.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
oryzae pv. oryzae PXO99A]
gi|84367950|dbj|BAE69108.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
oryzae pv. oryzae MAFF 311018]
gi|188520737|gb|ACD58682.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Xanthomonas
oryzae pv. oryzae PXO99A]
Length = 367
Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats.
Identities = 141/364 (38%), Positives = 206/364 (56%), Gaps = 22/364 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +F +DLP IA P+ R ++RL+VV P P ++D DLP L D ++
Sbjct: 12 LKKSDFHYDLPEELIAQAPLAERAASRLLVVPP---SPQALADRRARDLPELLQPGDLLI 68
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + V SK K G ++
Sbjct: 69 FNDTRVIPARLFGQKAS-----GGRVEILIERLLGERQARVQIGASKSPKAGSLIAL--- 120
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ +A V+ + G L+ LE + G +PLPPYI R+ ++ D Y
Sbjct: 121 --DAGGQAEVLGR--DGAFYLLRFEIPTPLEHWLLEAGRLPLPPYIRREPGVE--DRERY 174
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF LL+RL G++ VTLHVGAGTF PV+V+ D H+M
Sbjct: 175 QTVFAREVGAVAAPTAGLHFDEALLARLRERGVEFGHVTLHVGAGTFQPVRVDKLDQHVM 234
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-----TTEDGIINPWSGFTNI 295
H E + A + + ++RGGR+++VGTT +R LE+A +G + P++G T I
Sbjct: 235 HKEWLNVGAALVEQVRRTRARGGRVIAVGTTVVRSLESAWRTTDAAPEGELQPFAGETQI 294
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGYR R+VD +++NFHLP+STL+M+VSAF G E + Y HAI+ YRF+SYGD L
Sbjct: 295 FILPGYRIRSVDAMVTNFHLPESTLMMMVSAFAGRERIFEAYHHAIAQRYRFFSYGDAML 354
Query: 356 LFQK 359
L+ +
Sbjct: 355 LWSR 358
>gi|218778769|ref|YP_002430087.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfatibacillum alkenivorans AK-01]
gi|218760153|gb|ACL02619.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfatibacillum alkenivorans AK-01]
Length = 359
Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats.
Identities = 137/363 (37%), Positives = 190/363 (52%), Gaps = 24/363 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +D++LP IA P RD++RL+ + N + L D +V N
Sbjct: 11 LASYDYELPEELIAQAPAEKRDASRLLKLDKNTGQTA---HLQFAQAADLLQPGDLMVVN 67
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLH--------MRVSPNSWSVYARPSKVIKKGDI 114
+TKV +L G + ++ + P + + SK K G
Sbjct: 68 DTKVTPVRLFGKKE-----TGGKVEALIIDYRPVAQAGPGEPFACECLVKASKRPKPGSR 122
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
L F L+A V+ + I L+ E + + IPLPPYI R
Sbjct: 123 LFF-----DKGLKAKVLKAED--RICLLEFTCPTEPGAVLDDIAAIPLPPYIRRGGDAPP 175
Query: 175 -RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQTTYA+ +G+VAAPTAGLHFT LL + + G++ +TLHVG GTFMPV+V+
Sbjct: 176 CNDRERYQTTYARHKGAVAAPTAGLHFTPELLDFIQAKGVEFVRITLHVGYGTFMPVRVD 235
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
D H MHSE I AQA+N K +G R+V+VGTTS+R LE ++ E+G + SG
Sbjct: 236 DVRKHKMHSEFYEISPEAAQAINHAKDQGRRVVAVGTTSVRTLEYSSREEGRVAAGSGMC 295
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
++FI PG+RF VD L++NFHLP+STLLMLVSA G E YQ A++ YRF+SYGD
Sbjct: 296 DLFIMPGFRFNIVDALITNFHLPQSTLLMLVSALAGRENILAAYQEAVAEKYRFFSYGDA 355
Query: 354 SLL 356
+
Sbjct: 356 MFI 358
>gi|269837349|ref|YP_003319577.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Sphaerobacter thermophilus DSM 20745]
gi|269786612|gb|ACZ38755.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Sphaerobacter thermophilus DSM 20745]
Length = 341
Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats.
Identities = 141/355 (39%), Positives = 207/355 (58%), Gaps = 16/355 (4%)
Query: 4 KEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNN 63
++D+DLPP IA PV PRD++RLMVV I+ DLP+ L+ D ++ N+
Sbjct: 2 ADYDYDLPPELIAQHPVEPRDASRLMVVDR---ASETIAHRRFRDLPSLLSPGDLLIVND 58
Query: 64 TKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQ 123
T+V+ A+L+G R ++ L R+ W RP++ ++ G +H Q G+
Sbjct: 59 TRVMPARLHGRRP-----TGGQVELLLLRRLEDGCWEAMGRPARRLRPGTFVHLRDQGGR 113
Query: 124 SRLE-ATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+E A V+ + G + + E+E ++ G +PLPPYI + D YQT
Sbjct: 114 EAVEPAEVVARRGEGLLAVRLPS---EVEARLDEFGEMPLPPYIRAR----LEDPERYQT 166
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
+A GS AAPTAGLHFT LL+ L + GI+ +TLHVG GTF+PVKVED H MH
Sbjct: 167 VFATEVGSAAAPTAGLHFTPRLLAELDAAGIRRATITLHVGLGTFLPVKVEDARQHRMHQ 226
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E + A T A+ ++ G R+V+VGTT+ R LE+ + + SG+T++FI PG++
Sbjct: 227 EWYHVPADTLAAIRETRAAGRRVVAVGTTACRTLESIAPDLDADDDLSGWTDLFIVPGHQ 286
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+ VD L++NFHLP+STLL+LVSAF G E + Y+ A+ YRF+S+GD L+
Sbjct: 287 FQVVDALVTNFHLPRSTLLLLVSAFAGRELILRAYEEAVRTRYRFFSFGDAMLIL 341
>gi|149914724|ref|ZP_01903254.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseobacter
sp. AzwK-3b]
gi|149811517|gb|EDM71352.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseobacter
sp. AzwK-3b]
Length = 350
Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats.
Identities = 165/360 (45%), Positives = 223/360 (61%), Gaps = 13/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RP PR SARL+V + I D +V DL FL D +V
Sbjct: 1 MKLSDFDFDLPEDLIATRPARPRSSARLLVAQGD-----AIRDAIVRDLGDFLRPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINR--REKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T VI A+L+G+R + +I TL WS +P K ++ G+++ F
Sbjct: 56 LNDTAVIPARLSGMRRREGPEGVTQAKIEVTLLEPGPEGDWSALVKPLKKVRDGEVIVFG 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ LEA V+ + G+ LL F++ G + ++ G +PLPPYIA +R DA+D
Sbjct: 116 AG-----LEAEVLARRE-GQGLLRFNLEGEAFDTALNDAGAMPLPPYIAARRAADAQDRT 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ +G+VAAPTA LHF + LL RL ++G+ VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVWARHKGAVAAPTASLHFDAELLERLEAMGVTFSHVTLHVGAGTFLPVKVEDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A + + K+ GGR++ VGTT+LRL+E+A G I PW G T+IFI
Sbjct: 230 RMHAEWGRVSEAAAAEIAATKAAGGRVIPVGTTALRLIESAAQASGAIAPWEGETDIFIY 289
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ FR D LM+NFHLPKSTL+MLVSA G + K +Y HA+ + YRF+SYGD SLL
Sbjct: 290 PGFTFRVADALMTNFHLPKSTLMMLVSALMGQDRIKDIYDHAVENRYRFFSYGDASLLIP 349
>gi|296445819|ref|ZP_06887771.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylosinus trichosporium OB3b]
gi|296256647|gb|EFH03722.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Methylosinus trichosporium OB3b]
Length = 371
Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats.
Identities = 194/358 (54%), Positives = 240/358 (67%), Gaps = 11/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V+ FDF+LP IALRP PRDSARL+VV P+ SD VSDLP L DA+V
Sbjct: 24 MRVELFDFELPQEAIALRPASPRDSARLLVVPPD----GHFSDRSVSDLPQLLAPGDALV 79
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L+G R +R I TL RV + W RP+K + G+ + F
Sbjct: 80 VNDTQVIHARLSGFRARGESR--AHIDATLIERVGADRWRALVRPAKKLGVGESVRFAEG 137
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
LEA V++K GEIL FS++G L+ + G +PLPPYIA KR DARD DY
Sbjct: 138 -----LEARVVEKGENGEILFAFSLAGSALDAAVEASGVMPLPPYIAGKRAADARDEADY 192
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A G+VAAPTAGLHFT L+ L + G+ ++ VTLHVGAGTF+PVK EDT +H M
Sbjct: 193 QTLFAARAGAVAAPTAGLHFTPRLVDALTARGVSLHSVTLHVGAGTFLPVKAEDTAEHRM 252
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G IDA TA ALN ++RGGRIV+VGTT+LR+LE+A DG I+P++ T IFITPG
Sbjct: 253 HAEWGAIDAATADALNETRARGGRIVAVGTTALRVLESAAGADGRISPFADRTAIFITPG 312
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRFRAVD L++NFHLP+STL MLVSAF G+E K Y HAI YRFYSYGD LL +
Sbjct: 313 YRFRAVDALLTNFHLPRSTLFMLVSAFSGLERMKAAYAHAIGSGYRFYSYGDACLLER 370
>gi|313203716|ref|YP_004042373.1| s-adenosylmethionine/tRNA-ribosyltransferase isomerase
[Paludibacter propionicigenes WB4]
gi|312443032|gb|ADQ79388.1| S-adenosylmethionine/tRNA-ribosyltransferase isomerase
[Paludibacter propionicigenes WB4]
Length = 349
Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats.
Identities = 126/361 (34%), Positives = 183/361 (50%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP IA P RD +RLMVVH I D+ + N ND +
Sbjct: 1 MKLSKFKFKLPDELIAQYPSKHRDESRLMVVHRKTG---EIEHRAFKDVLEYFNENDLFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + +I L ++ W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK----EKTGAQIEVFLLRELNHEMRLWDVLVEPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
D + A VID + L F G E ++ + +G PLP I R+ ++ D
Sbjct: 114 EDD---SIVAEVIDNTTSRGRTLRFLFDGTHDEFKKGLYSLGETPLPRNITRE--VEPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+QT +AK +G+V+AP AG+HF+ LL R+ GI +VT H+ G F + VED
Sbjct: 169 ADRFQTIFAKNEGAVSAPAAGMHFSRELLKRMEIKGIDSAYVTSHMSLGNFREIDVEDLT 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE + T + +N + I +VG T +R LET +G I P+ G+TN F
Sbjct: 229 KHKMDSEQMSVSVETVKKVNEAQLANRNICAVGVTVMRALETVVGTEGKIKPYDGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFHLP STL+ML +AF + K Y+ A+ YRF YGD L+
Sbjct: 289 IFPPYDFTVANSMITNFHLPYSTLIMLTAAFGDYDLIMKAYEIAVKEEYRFGVYGDAMLI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|270157347|ref|ZP_06186004.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Legionella
longbeachae D-4968]
gi|289164259|ref|YP_003454397.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Legionella
longbeachae NSW150]
gi|269989372|gb|EEZ95626.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Legionella
longbeachae D-4968]
gi|288857432|emb|CBJ11260.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Legionella
longbeachae NSW150]
Length = 337
Score = 420 bits (1079), Expect = e-115, Method: Composition-based stats.
Identities = 147/357 (41%), Positives = 206/357 (57%), Gaps = 20/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F FDLP IA P+ R +RL+V + H ++ FL S D +V
Sbjct: 1 MNKEDFYFDLPHELIAQYPLANRSDSRLLVYDRKIG---EYGHHQFREIADFLKSGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N++KVI A+L G + ++ + ++ + + SK +K G I+
Sbjct: 58 MNDSKVIPARLYGHKT-----TGGKVELLVERITGEFTFLAHIKASKALKAGSIIQLEQN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
++D+ + L + IE+ ++ VG IPLPPYIAR + D Y
Sbjct: 113 K-----HIEILDRQDD----LFVCKANIEVLELLNGVGHIPLPPYIARN--DETLDIDRY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GSVAAPTAGLHF +L+ + S GI V +VTLHVGAGTF PV+ ++ +DH M
Sbjct: 162 QTIYAKHAGSVAAPTAGLHFDEAVLANIRSRGISVGYVTLHVGAGTFRPVRCDNIEDHKM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I A A+++ K+ G R+++VGTT+LR LE+A ++G + P S T+IFI PG
Sbjct: 222 HREHFTISAELCAAIHATKAAGNRVIAVGTTALRSLESAV-QNGALTPCSRDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+ D LM+NFHLP+STLLMLVSAF G ++ K+Y AI YRF+SYGDTSLL
Sbjct: 281 YEFKICDGLMTNFHLPESTLLMLVSAFIGHKQAMKLYHEAIEKRYRFFSYGDTSLLL 337
>gi|260575224|ref|ZP_05843224.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Rhodobacter
sp. SW2]
gi|259022484|gb|EEW25780.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Rhodobacter
sp. SW2]
Length = 345
Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats.
Identities = 163/358 (45%), Positives = 215/358 (60%), Gaps = 13/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP + IA RP PR +ARL++ + ISD VSDL D +V
Sbjct: 1 MKLSDFDFDLPEALIATRPARPRTAARLLLAEGD-----AISDRQVSDLVDIFRPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G R + TL + W A+P + + G+++ F
Sbjct: 56 LNNTRVIPARLTGTRARGNAV--ARVEVTLLEPAADGGWRALAKPLRKLALGEVVRF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
ATV K T L+ + G + ++ G +PLPPYIA KR DA+D VDY
Sbjct: 111 --SDHFSATVAGKSETDLRLVF-DLEGAAFDAALAEAGAMPLPPYIAAKRAPDAQDRVDY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTA LHF + LL+ L + G+ VTLHVGAGTF+PVKVED H M
Sbjct: 168 QTVFARHSGAVAAPTASLHFDAALLAALAAKGVDFTEVTLHVGAGTFLPVKVEDVTTHRM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G + A +N+ + GGR++ VGTT+LRL+E+A DG++ W+G T+IFI PG
Sbjct: 228 HAEWGEVTTVAAAQINATHAAGGRVIPVGTTALRLIESAAAADGLVRAWAGTTDIFIYPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRFR D LM+NFHLPKSTLLMLVSA G ++YQHA+ YRF+SYGD SLL
Sbjct: 288 YRFRVADALMTNFHLPKSTLLMLVSALMGQGRITRIYQHAVVQRYRFFSYGDASLLIP 345
>gi|297568244|ref|YP_003689588.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfurivibrio alkaliphilus AHT2]
gi|296924159|gb|ADH84969.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfurivibrio alkaliphilus AHT2]
Length = 358
Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats.
Identities = 140/367 (38%), Positives = 201/367 (54%), Gaps = 24/367 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+ LPP IA +P RD +RL+V +SD L D+ ++L D +VFN
Sbjct: 6 LDDYDYHLPPELIAQQPPPRRDGSRLLVCDGRRD--FALSDQLFPDMLSWLAPGDLLVFN 63
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHM------RVSPNSWSV----YARPSKVIKKG 112
+T+V A+L+G + + L P + + SK + G
Sbjct: 64 DTRVFPARLSGHKES-----GGRVELLLLAYPVLSDVSGPGATEAEAWGLLKSSKGARPG 118
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
L F L A V +K G++ + + G L ++ G +PLPPYI R+
Sbjct: 119 TWLQFGDD-----LRALVEEKGEGGKVRVRLVL-GAPLADCLARYGRMPLPPYIKRENE- 171
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D YQT YA+ G+VAAPTAGLHFT LL ++ G+ + +TLHVG GTF PV+
Sbjct: 172 QEEDRRRYQTIYAQTPGAVAAPTAGLHFTQELLGQIKKKGVGMAHITLHVGYGTFAPVRS 231
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D H +H+E I A+ +N K+ GGRI +VGTTS+R LE A EDG +NP SG
Sbjct: 232 QDIRRHQIHAEEYLISRENAELINRTKAAGGRIWAVGTTSVRTLEAAAGEDGRVNPGSGS 291
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
++I PGY F+ VD L++NFHLP+S+LL LVSA G E + Y+HA++ YRF+SYGD
Sbjct: 292 CRLYIYPGYSFKVVDNLLTNFHLPRSSLLFLVSALAGRENILRAYRHAVAERYRFFSYGD 351
Query: 353 TSLLFQK 359
+ +K
Sbjct: 352 AMAIIRK 358
>gi|8037781|gb|AAF71490.1|AF232005_1 QueA [Pseudomonas syringae pv. syringae]
Length = 354
Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats.
Identities = 144/358 (40%), Positives = 199/358 (55%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S+RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTLDGPTGA---LAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
F NT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FTNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRSSKSPKPGSSILI--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
EA ++ + + L E+ + VG +PLPPYI RP + D Y
Sbjct: 110 --DGGGEAEMVARHDALFELRFAE----EVLPLLERVGRMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDQPLLEAIAAKGVETAFVTLHVGAGTFQPVRVEQIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + ++RGGR+++VGTTS+R LE+A DG + +SG T+IFI PG
Sbjct: 222 HSEWLEVGQDVVDAVAACRARGGRVIAVGTTSVRSLESAAR-DGELKSFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y AI H YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFSYGDAMFITR 338
>gi|302879498|ref|YP_003848062.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Gallionella
capsiferriformans ES-2]
gi|302582287|gb|ADL56298.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Gallionella
capsiferriformans ES-2]
Length = 344
Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats.
Identities = 146/356 (41%), Positives = 198/356 (55%), Gaps = 20/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M EFDF LP IA P R ++RL+ VH ++ D DL + D +V
Sbjct: 1 MRTDEFDFALPDGLIAQHPPEKRGASRLLCVHDG-----ILEDSQFVDLLQKVAPGDLLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G++ R +I + ++ + R SK G + +
Sbjct: 56 LNDTRVIRARLFGIK-----RSGGKIEVMVERVLNNHEVLAQVRASKSPPTGSYVLLAGE 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L V+ + GE + + + + G +PLPPYI +A D Y
Sbjct: 111 -----LSVEVMGR--AGEFYHLRFCAEEPVLELLERYGRLPLPPYITH--AAEAEDETRY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF +L L G+K+ +VTLHVGAGTF PV+ E +HIM
Sbjct: 162 QTVFARQSGAVAAPTAGLHFDDAMLEALQDKGVKIAYVTLHVGAGTFQPVRAEWLSEHIM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I T A+ + GGR+V+VGTTSLR LE+A G + +G T IFITPG
Sbjct: 222 HSECYQISQATVDAIEQTHAAGGRVVAVGTTSLRALESAAAS-GELQSGAGETRIFITPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRFR VD+L++NFHLPKSTLLMLVSAF G+ E + Y HA++ YRF+SYGD L+
Sbjct: 281 YRFRVVDVLLTNFHLPKSTLLMLVSAFGGMSEMRAAYLHAVAQQYRFFSYGDAMLI 336
>gi|119490207|ref|ZP_01622720.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Lyngbya sp.
PCC 8106]
gi|119454093|gb|EAW35246.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Lyngbya sp.
PCC 8106]
Length = 371
Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats.
Identities = 144/372 (38%), Positives = 202/372 (54%), Gaps = 27/372 (7%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +D++LP RIA PV PRD +RL+V+ S + DLP +L S+D +VF
Sbjct: 9 TTEGYDYELPEERIAQNPVVPRDQSRLLVIDSLTS----HHHRVFRDLPHWLKSDDLLVF 64
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF---- 117
NNT+VI A+L G + + + L PN W +P K K G + F
Sbjct: 65 NNTQVIPARLYGHKSSGGS-----VEILLLEEQKPNCWLALVKPGKYFKPGVKIEFEPLH 119
Query: 118 -FSQDGQSRLEATVIDKWNT--GEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
L A V+D T G +L + G L Q+ G IP PPY+ + +
Sbjct: 120 PAPDSILQPLSAIVVDTDETTGGRLLQFYLPQGQSLIEQLDQFGHIPFPPYVNQSQAFPQ 179
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
+ YQT YA+ G+VAAPTAGLHFT L RL GI FVTLHVG GTF PV+V+D
Sbjct: 180 Q----YQTIYAQRPGAVAAPTAGLHFTEELFERLHHQGINKAFVTLHVGVGTFRPVEVQD 235
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
H MH+E + T + + K+ GGR+++VGTT +R LE +G + + G T+
Sbjct: 236 ITTHQMHAEWIEVSPETVEQIQKTKANGGRVIAVGTTVVRTLEGVAMAEGKLTSYRGKTD 295
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHA-------YRF 347
FI PGY+F+ +D L++NFHLP+S+L+MLV+AF G +YQ AI+ + YRF
Sbjct: 296 AFIYPGYQFQVIDGLITNFHLPRSSLMMLVAAFIGRPRLLDLYQDAIAQSAEGFTHPYRF 355
Query: 348 YSYGDTSLLFQK 359
YS+GD L+ +
Sbjct: 356 YSFGDGMLILPE 367
>gi|300087727|ref|YP_003758249.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Dehalogenimonas lykanthroporepellens BL-DC-9]
gi|299527460|gb|ADJ25928.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Dehalogenimonas lykanthroporepellens BL-DC-9]
Length = 343
Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats.
Identities = 138/358 (38%), Positives = 205/358 (57%), Gaps = 18/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F++ LP + IA P PRDS+RL+V++ + I D+ +L DA+V
Sbjct: 1 MKTADFNYHLPENLIAQTPAEPRDSSRLLVLNRDTGS---IEHRRFRDIIDYLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+++VI A+L G +F +I L R + N W +PSK + G + Q
Sbjct: 58 FNDSRVIPARLYGHKF----GTGAKIEALLLTRKAGNEWQALLKPSKKLSPGTKVELHDQ 113
Query: 121 DG-QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G S + V+ K G + I E ++ +G + LPPYI R +
Sbjct: 114 SGQDSGVTFEVLSKSEDGIADIR-----ISDENRLQDLGILALPPYIHH-RLDEP---ER 164
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y++I GSVAAPTAGLHFT LL + S GIK+ FVTLH+G TF PVK E+ +H
Sbjct: 165 YQTVYSRINGSVAAPTAGLHFTPELLKTIESKGIKLLFVTLHIGLDTFRPVKEENPANHP 224
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-INPWSGFTNIFIT 298
+H E + TA+A+N VK++GGR+ VGT+++R LE A G+ + P+ G+ +FI
Sbjct: 225 IHREFAILTKETAEAINEVKAKGGRVYGVGTSAVRTLEWAAKNYGLPLQPFEGWVELFIL 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PG+ +R +D L++NFHLP T LML +AF G + K+ Y+ A+ YRF+S+GD+ ++
Sbjct: 285 PGFEYRVIDRLITNFHLPCGTPLMLTAAFAGWDNVKRAYEAAVVEEYRFFSFGDSMVV 342
>gi|222056534|ref|YP_002538896.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Geobacter
sp. FRC-32]
gi|254764278|sp|B9M5N6|QUEA_GEOSF RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|221565823|gb|ACM21795.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Geobacter
sp. FRC-32]
Length = 343
Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats.
Identities = 136/357 (38%), Positives = 205/357 (57%), Gaps = 14/357 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +K+F++ LPP IA P R+SARLM + I + +V+D+ + + D +V
Sbjct: 1 MQLKDFNYHLPPELIAQEPAHRRESARLMTLDRKSG---EIGEGVVADIAEYFVAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + E+ + W + SK G ++
Sbjct: 58 INDTKVIPARLLGRKETGGK---AEVFLVRRRDEAGQVWQCLIKCSKSPAPGSLILLSEG 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A ++++ ++ FS L+R + ++G++PLPPYI RP + D Y
Sbjct: 115 -----VTARIVERSEHDTWIVSFSPEEGFLDR-LEMIGSMPLPPYIH--RPANVIDGERY 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +G+VAAPTAGLHFT +LL ++ + G+ + +TLHVG GTFMPV+V+D +H M
Sbjct: 167 QTVFARERGAVAAPTAGLHFTESLLQKIRARGVDILPLTLHVGLGTFMPVRVKDLSEHRM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I TA+A+ K G R++++GTT+ R LE A EDG ++ G +IFI PG
Sbjct: 227 HREYYRIPETTAKAVTDRKKAGKRVIALGTTTTRALEHAAAEDGSLDAKEGEADIFIVPG 286
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+ VD L++NFHLP+STLLMLVSAF G + Y A+ +RF+SYGD ++
Sbjct: 287 YAFKTVDALITNFHLPESTLLMLVSAFAGRDRLFNAYAEAVRRKFRFFSYGDAMFIY 343
>gi|218131682|ref|ZP_03460486.1| hypothetical protein BACEGG_03303 [Bacteroides eggerthii DSM 20697]
gi|317474696|ref|ZP_07933970.1| tRNA ribosyltransferase-isomerase [Bacteroides eggerthii 1_2_48FAA]
gi|217985985|gb|EEC52324.1| hypothetical protein BACEGG_03303 [Bacteroides eggerthii DSM 20697]
gi|316909377|gb|EFV31057.1| tRNA ribosyltransferase-isomerase [Bacteroides eggerthii 1_2_48FAA]
Length = 352
Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats.
Identities = 123/363 (33%), Positives = 188/363 (51%), Gaps = 15/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P RD +RLMV+H I + D+ + + D +
Sbjct: 1 MKLSQFKFKLPEEKIALHPTRYRDESRLMVLHRKTG---EIEHRMFKDILEYFDDKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK----EKTGARIEVFLLRELNEELRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDARD 176
D + A VID + L F G E ++ + +G PLP I RP++ D
Sbjct: 114 EDD---SMVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYALGETPLPHSII-NRPVEPED 169
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+Q+ +A+ +G+V APTA LHF+ L+ R+ GI ++TLH G G F + VED
Sbjct: 170 SERFQSIFARNEGAVTAPTASLHFSRELMKRMEIKGIDFAYITLHAGLGNFRDIDVEDLT 229
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H SE + + +N K ++ +VGTT +R +E+ + DG + + G+TN F
Sbjct: 230 KHKTDSEQMIVTEEAVKIVNRAKDVNRQVCAVGTTVMRAIESTVSTDGHLKEYEGWTNKF 289
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + ++SNFH+P STLLM+V+AF G E+ + Y A+ YRF +YGD L+
Sbjct: 290 IFPPYDFTVANAMVSNFHMPLSTLLMIVAAFGGYEQVMEAYNVALKEDYRFGTYGDAMLI 349
Query: 357 FQK 359
K
Sbjct: 350 TDK 352
>gi|121998492|ref|YP_001003279.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Halorhodospira halophila SL1]
gi|121589897|gb|ABM62477.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Halorhodospira halophila SL1]
Length = 345
Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats.
Identities = 147/360 (40%), Positives = 206/360 (57%), Gaps = 23/360 (6%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+FD+ LP IA RP R ++R++V+ + ++D +DLPA+L + D +V
Sbjct: 5 RRSDFDYALPERLIAHRPAAQRAASRMLVLRTDSGA---LADRRFTDLPAYLRAGDLLVL 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWS--VYARPSKVIKKGDILHFFS 119
N+T+VI A+L + + + P++ R ++ K G L
Sbjct: 62 NDTRVIPARLEAAKP-----TGARVEVLIERVEDPDAGLITCQLRANRTPKPGGRLGLAD 116
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARDY 177
++A V+++ ++G L + VG +PLPPYI +RP D D
Sbjct: 117 G-----VQAEVLERE---GRFFRLQLAGLVESLWDYLERVGHVPLPPYI--RRPDDDEDR 166
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT +A G+VAAPTAGLHF LL RL + G+ VTLHVGAGTF PV+ +D
Sbjct: 167 TRYQTVFAARPGAVAAPTAGLHFDDALLERLRADGVGTARVTLHVGAGTFAPVESDDLSA 226
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+E + A T A+N+ + RGGR+V+VGTT +R LE+A DG + P+SG T +FI
Sbjct: 227 HTMHAEWLEVSAETVAAVNATRERGGRVVAVGTTVVRALESAAA-DGQLAPYSGETRLFI 285
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGY FRAVD L++NFHLP+STLLMLVSAF G E Y+HA++ YRF+SYGD LL
Sbjct: 286 TPGYCFRAVDGLLTNFHLPESTLLMLVSAFGGYESVMAAYRHAVAEEYRFFSYGDAMLLI 345
>gi|261856761|ref|YP_003264044.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Halothiobacillus neapolitanus c2]
gi|261837230|gb|ACX96997.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Halothiobacillus neapolitanus c2]
Length = 367
Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats.
Identities = 144/363 (39%), Positives = 206/363 (56%), Gaps = 20/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M K FD+ LPP IA RP+ PR+ ARL+V+ P + + ++D P L+ D ++
Sbjct: 1 MHTKLFDYTLPPELIAHRPIEPREHARLLVLEKE-HTPNDLRECRIADFPDLLHPGDLLI 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A++ G + +I + S + R SK G LH
Sbjct: 60 LNNTRVIPARVFGHKAS-----GGKIEVLIERLQDGFSAWCHIRASKSPAPGTTLH---M 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSIS-GIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
DGQ+ L TV ++ + ++ + S ++ ++ G +PLPPYI R DA+D D
Sbjct: 112 DGQATL--TVKNRQDALFLVELTPDSLNPDVLTWLNRAGHMPLPPYI--DRADDAQDRHD 167
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A G+VAAPTA LH T NLL ++ + G+K FVTLHVGAGTF PV+V++ +H
Sbjct: 168 YQTVFAAHDGAVAAPTASLHLTENLLEQIAAKGVKTAFVTLHVGAGTFQPVRVDNIQEHT 227
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED------GIINPWSGFT 293
MHSE + T A+++ + RGGR+V VGTT+LR +ETA E+ I P+ G T
Sbjct: 228 MHSEWLNVPEETVAAIDATRERGGRVVCVGTTALRAIETAARENPTAAAQRRIAPYQGDT 287
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+F+ PG D L++NFHLP+STLLMLVSA G E Y +A+ +RF+SYGD
Sbjct: 288 RLFLYPGQPVHVTDALLTNFHLPQSTLLMLVSALAGRERILAAYDYAVRAGFRFFSYGDA 347
Query: 354 SLL 356
+
Sbjct: 348 MFI 350
>gi|162146698|ref|YP_001601157.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Gluconacetobacter diazotrophicus PAl 5]
gi|189038525|sp|A9HBI8|QUEA_GLUDA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|161785273|emb|CAP54819.1| putative s-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Gluconacetobacter diazotrophicus PAl 5]
Length = 355
Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats.
Identities = 165/355 (46%), Positives = 217/355 (61%), Gaps = 14/355 (3%)
Query: 4 KEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNN 63
+FDFDLPP+ IA P PRDSARL+ ++ D +V DLP+ L D +V N+
Sbjct: 6 SDFDFDLPPALIAEHPARPRDSARLL----DIPAAGPFHDRIVRDLPSLLRPGDLLVAND 61
Query: 64 TKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQ 123
T VI AQL+ R E I TL + +W AR ++ ++ GD+L F
Sbjct: 62 TAVIPAQLDARR------GEARIGITLDRILPDGTWHALARNARRLRAGDVLTFPGTPN- 114
Query: 124 SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTT 183
A VI + + G ++L F G + + G + LPPYIAR +D VDY T
Sbjct: 115 ---TAAVISRDDEGGVVLRFDTEGAAFDAFLQAAGVLALPPYIARPFGPTEQDRVDYATI 171
Query: 184 YAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSE 243
++ +G+VAAPTAGLHFT +LL+ L + G+ +TLHVGAGTF+PV+ + H MH+E
Sbjct: 172 FSAHRGAVAAPTAGLHFTPDLLAALDAAGVGRCTLTLHVGAGTFLPVRGDSIAAHRMHAE 231
Query: 244 IGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRF 303
G I A TA A+N+ + GGRIV+VGTTSLRLLE+A DG I P+ G T IFI PGYRF
Sbjct: 232 RGVITAETADAINAARRAGGRIVAVGTTSLRLLESAADPDGTIRPFDGDTAIFIRPGYRF 291
Query: 304 RAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
RAVD+LM+NFHLP+STL MLV AF G + + Y HA++ YRFYSYGD LL +
Sbjct: 292 RAVDVLMTNFHLPRSTLFMLVCAFAGYDRMRDAYAHAVADGYRFYSYGDACLLHR 346
>gi|257462420|ref|ZP_05626834.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. D12]
gi|317060084|ref|ZP_07924569.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. D12]
gi|313685760|gb|EFS22595.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. D12]
Length = 343
Score = 418 bits (1076), Expect = e-115, Method: Composition-based stats.
Identities = 140/356 (39%), Positives = 199/356 (55%), Gaps = 16/356 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++++D+DLP I P PRD A+L++++ + D D+ +L D +V
Sbjct: 4 KLQDYDYDLPEELIGQSPREPRDHAKLLLINRKTKK---LEDKYFYDILDYLQKGDVLVR 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKVI A+L G + + L R ++W +P+K +K G +
Sbjct: 61 NSTKVIPARLYGQKE-----TGGVLEVLLVKRKDLDTWECLLKPAKKLKLGQKIFIGP-- 113
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ L A +++ G +L FS G E + +GT+PLPPYI K D YQ
Sbjct: 114 -NAELVAELLEIQEDGNRILKFSYEG-SFEENLDRLGTMPLPPYIVEK----LEDQEMYQ 167
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YAK SVAAPTAGLHFT LL ++ GI++ + L VG GTF PV+ ED +H MH
Sbjct: 168 TVYAKRGESVAAPTAGLHFTKELLEKIQEKGIEIVDIYLEVGLGTFRPVQTEDVLNHKMH 227
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E+ I A+ +N K+ G RI+SVGTT+ R LE++ E+GI+ T+IFI PGY
Sbjct: 228 EELFEIPPEAAEKINRAKAEGRRIISVGTTTTRALESSVDENGILLAQKKNTDIFIYPGY 287
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
RF+ VD L++NFHLPKSTLLMLVSAF E +Y HA+ Y F+S+GD ++
Sbjct: 288 RFQMVDALITNFHLPKSTLLMLVSAFSEREFMLDVYHHAVEQEYHFFSFGDAMFIY 343
>gi|293607153|ref|ZP_06689495.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Achromobacter piechaudii ATCC 43553]
gi|292814487|gb|EFF73626.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Achromobacter piechaudii ATCC 43553]
Length = 352
Score = 418 bits (1076), Expect = e-115, Method: Composition-based stats.
Identities = 142/363 (39%), Positives = 202/363 (55%), Gaps = 27/363 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ V +F++DLPP IA P R +RL+ + + D +DL L +D +V
Sbjct: 5 LTVSDFNYDLPPELIAQTPAATRTGSRLLHLD----AASQLHDRQFADLIGLLRPDDLLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + ++ + + + R SK G +L
Sbjct: 61 FNDTRVIKARLAGHKI-----TGGKVEVLVERITESDRVLAHVRASKSPGPGMVLRLADA 115
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
EATV+ + L G L+ + G PLPPYI D+ D Y
Sbjct: 116 -----FEATVLGREGE---LFDIRFPGPVLD-LLDAHGATPLPPYITH--AADSGDDDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF L RL +GI FVTLHVGAGTF PV+V++ DH+M
Sbjct: 165 QTVYAREPGAVAAPTAGLHFDQPTLDRLADLGIARAFVTLHVGAGTFQPVRVDNLADHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE------DGI-INPWSGFT 293
H+E + T A+ + +++GGR+++VGTTS+R LE+A + DG+ + G T
Sbjct: 225 HAEWFTVPQATVDAIAATRAKGGRVIAVGTTSVRALESAAAQTEGRTADGLPLAAAQGDT 284
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+FITPGYR+R VD L++NFHLP+STLLMLVSA G+E ++ Y HA++ YRF+SYGD
Sbjct: 285 RLFITPGYRYRVVDALVTNFHLPQSTLLMLVSALAGVEPIRRAYAHAVAQRYRFFSYGDA 344
Query: 354 SLL 356
+
Sbjct: 345 MFI 347
>gi|319900631|ref|YP_004160359.1| S-adenosylmethionine/ tRNA-ribosyltransferase-isomerase
[Bacteroides helcogenes P 36-108]
gi|319415662|gb|ADV42773.1| S-adenosylmethionine/ tRNA-ribosyltransferase-isomerase
[Bacteroides helcogenes P 36-108]
Length = 352
Score = 418 bits (1076), Expect = e-115, Method: Composition-based stats.
Identities = 124/363 (34%), Positives = 189/363 (52%), Gaps = 15/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P RD +RLMV+H I + D+ + + D +
Sbjct: 1 MKLSQFKFKLPEEKIALHPTKYRDESRLMVLHRKTG---EIEHRMFKDILDYFDDKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK----EKTGARIEVFLLRELNEELRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDARD 176
D + A VID + L F G E ++ + +G PLP I RP++A D
Sbjct: 114 DDD---SMVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYALGETPLPHGII-NRPVEAED 169
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+Q+ +A+ +G+V APTA LHF+ L+ R+ GI +VTLH G G F + VED
Sbjct: 170 AERFQSIFARNEGAVTAPTASLHFSRELMKRMEIKGIDFAYVTLHAGLGNFRDIDVEDLT 229
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H SE + A + +N K ++ +VGTT +R +E+ + DG + + G+TN F
Sbjct: 230 KHKTDSEQMTVSAEAVKVVNRAKDFNRQVCAVGTTVIRAIESTVSTDGHLKEYVGWTNKF 289
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + ++SNFH+P STLLM+V+AF G ++ Y A+ YRF +YGD L+
Sbjct: 290 IFPPYDFTVANAMVSNFHMPLSTLLMIVAAFGGYDQVMNAYDIALKEEYRFGTYGDAMLI 349
Query: 357 FQK 359
+
Sbjct: 350 TDR 352
>gi|294668511|ref|ZP_06733608.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
elongata subsp. glycolytica ATCC 29315]
gi|291309474|gb|EFE50717.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
elongata subsp. glycolytica ATCC 29315]
Length = 347
Score = 418 bits (1076), Expect = e-115, Method: Composition-based stats.
Identities = 155/359 (43%), Positives = 211/359 (58%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA +P R ++RL+ P S + D + S LP D +V
Sbjct: 1 MQLSDFDFDLPEHLIAQQPPAERGASRLLSALPGES----LRDEMFSVLPQLAGRGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + +I + + ++ + R SK K G L F
Sbjct: 57 FNNTKVMKARLFGQKTS-----GGKIEALIERVLDAHTALAHIRSSKSPKPGTRLLFDGG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G A + + GE+ + + R + G +PLPPYI +R D D Y
Sbjct: 112 IG-----AEMTAR--EGELFRLHFDGEETVYRLLEQHGQLPLPPYI--ERAADGDDESRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL+ L + G+++ VTLHVGAGTF PV+ E+ +H M
Sbjct: 163 QTVYAKHQGAVAAPTAGLHFTDTLLAELKAKGVRLAEVTLHVGAGTFQPVRTENIAEHKM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + T A+ + K+ G ++ +VGTTS+R LE+A E G + G T+IFITPG
Sbjct: 223 HSEWYDVPPETVAAVEAAKAEGAKVWAVGTTSMRALESAARETGRLKAGRGDTDIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRFR D L++NFHLPKSTLLMLVSAF GIEE + +Y+HA++ YRF+SYGD +L +K
Sbjct: 283 YRFRVADRLITNFHLPKSTLLMLVSAFSGIEEIRAVYRHAVAKEYRFFSYGDAMVLGRK 341
>gi|209543312|ref|YP_002275541.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Gluconacetobacter diazotrophicus PAl 5]
gi|209530989|gb|ACI50926.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Gluconacetobacter diazotrophicus PAl 5]
Length = 355
Score = 418 bits (1076), Expect = e-115, Method: Composition-based stats.
Identities = 165/355 (46%), Positives = 217/355 (61%), Gaps = 14/355 (3%)
Query: 4 KEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNN 63
+FDFDLPP+ IA P PRDSARL+ ++ D +V DLP+ L D +V N+
Sbjct: 6 SDFDFDLPPALIAEHPARPRDSARLL----DIPAAGPFHDRIVRDLPSLLRPGDLLVAND 61
Query: 64 TKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQ 123
T VI AQL+ R E I TL + +W AR ++ ++ GD+L F
Sbjct: 62 TAVIPAQLDARR------GEARIGITLDRILPDGTWHALARNARRLRAGDVLTFPGTPN- 114
Query: 124 SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTT 183
A VI + + G ++L F G + + G + LPPYIAR +D VDY T
Sbjct: 115 ---TAAVISRDDEGGVVLRFDTEGAAFDAFLQAAGVLALPPYIARPFGPTEQDRVDYATI 171
Query: 184 YAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSE 243
++ +G+VAAPTAGLHFT +LL+ L + G+ +TLHVGAGTF+PV+ + H MH+E
Sbjct: 172 FSAHRGAVAAPTAGLHFTPDLLAALDAAGVGRCTLTLHVGAGTFLPVRGDSIAAHRMHAE 231
Query: 244 IGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRF 303
G I A TA A+N+ + GGRIV+VGTTSLRLLE+A DG I P+ G T IFI PGYRF
Sbjct: 232 RGVITAETADAINAARRAGGRIVAVGTTSLRLLESAADPDGTIRPFDGDTAIFIRPGYRF 291
Query: 304 RAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
RAVD+LM+NFHLP+STL MLV AF G + + Y HA++ YRFYSYGD LL +
Sbjct: 292 RAVDVLMTNFHLPRSTLFMLVCAFAGYDRMRDAYAHAVADGYRFYSYGDACLLHR 346
>gi|148260342|ref|YP_001234469.1| queuosine biosynthesis protein [Acidiphilium cryptum JF-5]
gi|326403533|ref|YP_004283615.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Acidiphilium multivorum AIU301]
gi|166216693|sp|A5FY68|QUEA_ACICJ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|146402023|gb|ABQ30550.1| Queuosine biosynthesis protein [Acidiphilium cryptum JF-5]
gi|325050395|dbj|BAJ80733.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Acidiphilium multivorum AIU301]
Length = 345
Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats.
Identities = 164/358 (45%), Positives = 220/358 (61%), Gaps = 14/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+ LPP RIA P PR +ARL+ V + + D + DLPA L D +V
Sbjct: 1 MNLADFDYHLPPERIAAEPARPRHAARLLHVRGDG-----LDDRTILDLPALLAPGDLLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI AQL G R + I TL ++ +W V R ++ + G+ +
Sbjct: 56 VNDTRVIPAQLTGRR------GDARIGITLDRPLADGTWRVLLRNARRARPGETIAI--- 106
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DG + A VID+ G L F + ++ LPPYI R I +D DY
Sbjct: 107 DGAGGIAAEVIDRAPDGSATLRFDCDAETFRAMLDRAASLALPPYIPRPAGISEQDRQDY 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A +G+VAAPTAGLHFT +L+ L + G+ + VTLHVGAGTF+PV+ + + H +
Sbjct: 167 QTMFAAEEGAVAAPTAGLHFTETVLAALAARGVGLATVTLHVGAGTFLPVREDQLERHKL 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G I TA +N+ ++RGGRIV+VGTTSLR+LETA +DG + PW G T +FITPG
Sbjct: 227 HAERGLIGPETAALVNATRARGGRIVAVGTTSLRVLETAAGDDGTLAPWHGETELFITPG 286
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRF+ VD LM+NFHLPKSTLLMLV+AF G+E + Y HAI+ YRFYSYGD SLL +
Sbjct: 287 YRFKLVDRLMTNFHLPKSTLLMLVAAFAGVERMRAAYAHAIARGYRFYSYGDASLLER 344
>gi|83591621|ref|YP_425373.1| queuosine biosynthesis protein [Rhodospirillum rubrum ATCC 11170]
gi|91207400|sp|Q2RXQ9|QUEA_RHORT RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|83574535|gb|ABC21086.1| Queuosine biosynthesis protein [Rhodospirillum rubrum ATCC 11170]
Length = 345
Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats.
Identities = 187/356 (52%), Positives = 234/356 (65%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP IA+RP PRDSARL++V D V DLP L+ D +V
Sbjct: 1 MRVDLFDFDLPRDLIAVRPAVPRDSARLLLVEGESR-----RDLGVGDLPGLLDPGDILV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + TLH RV P++W +ARP++ +K G ++ F
Sbjct: 56 FNDTRVIPARLKGR------IGDGGVEVTLHKRVGPDAWDCFARPARKLKPGVVILFAEG 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
ATV + GE L F +G L + G IPLPPYI KRP DARD DY
Sbjct: 110 -----FTATVAARGEDGEATLRFDRAGAALMAALEAYGHIPLPPYI--KRPDDARDRADY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHFT LL+ L + G+ VTLHVGAGTF+PVKVEDTDDH M
Sbjct: 163 QTIYAREDGAVAAPTAGLHFTPALLAALEARGVSRAMVTLHVGAGTFLPVKVEDTDDHRM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G + A TA+A+N+ ++ GG++V+VGTT++RLLE+AT D +I P+ G T+IFITPG
Sbjct: 223 HAETGTLTAQTAEAINAARAAGGKVVAVGTTAMRLLESATGADKVIRPFHGDTSIFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRF AVD LM+NFHLP+STL MLVSAF G + Y HAIS YRFYSYGD+SLL
Sbjct: 283 YRFNAVDRLMTNFHLPRSTLFMLVSAFAGASRMRNAYAHAISQGYRFYSYGDSSLL 338
>gi|167763958|ref|ZP_02436085.1| hypothetical protein BACSTE_02341 [Bacteroides stercoris ATCC
43183]
gi|167698074|gb|EDS14653.1| hypothetical protein BACSTE_02341 [Bacteroides stercoris ATCC
43183]
Length = 352
Score = 418 bits (1074), Expect = e-115, Method: Composition-based stats.
Identities = 122/363 (33%), Positives = 188/363 (51%), Gaps = 15/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P RD +RLMV+H I + D+ + + D +
Sbjct: 1 MKLSQFKFKLPEEKIALHPTRYRDESRLMVLHRKTG---EIEHRMFKDILDYFDDKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK----EKTGARIEVFLLRELNEELRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDARD 176
D + A VID + L F G E ++ + +G PLP I RP++ D
Sbjct: 114 EDD---SMVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYALGETPLPHSII-NRPVEPED 169
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+Q+ +A+ +G+V APTA LHF+ L+ R+ GI ++TLH G G F + VED
Sbjct: 170 SERFQSIFARNEGAVTAPTASLHFSRELMKRMEIKGIDFAYITLHAGLGNFRDIDVEDLT 229
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H SE + + +N K ++ +VGTT +R +E+ + DG + + G+TN F
Sbjct: 230 KHKTDSEQMIVTEEAVKVVNRAKDLNRQVCAVGTTVMRAIESTVSTDGHLKEYEGWTNKF 289
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + ++SNFH+P STLLM+V+AF G E+ + Y A+ YRF +YGD L+
Sbjct: 290 IFPPYDFTVANAMVSNFHMPLSTLLMIVAAFGGYEQVMEAYNVALKEDYRFGTYGDAMLI 349
Query: 357 FQK 359
+
Sbjct: 350 TDR 352
>gi|149198170|ref|ZP_01875217.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lentisphaera araneosa HTCC2155]
gi|149138772|gb|EDM27178.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lentisphaera araneosa HTCC2155]
Length = 345
Score = 418 bits (1074), Expect = e-115, Method: Composition-based stats.
Identities = 132/355 (37%), Positives = 186/355 (52%), Gaps = 14/355 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +++F+LP IA RP R +R+MV+ S ++ + P+FL D IV
Sbjct: 4 QLSDYNFNLPEELIAQRPPAQRQQSRMMVIDRQKSSREIV---PFENFPSFLKPGDLIVR 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNTKVI A+L G + ++ L W +P + ++ G + +
Sbjct: 61 NNTKVIPARLFGTK----KDSGGKVQALLCEERKTGLWQAMLKPGRRLRAGTEVLIENSA 116
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ TV +K G L+ S ++ + G IPLPPY+ R+ DA D YQ
Sbjct: 117 TEYF---TVTEKLADGTYLIQ--FSNPDVLHILDQFGHIPLPPYMNRE--DDAEDRKRYQ 169
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A G+VAAPTAGLHFT + + G VTLH G GTF PV ED +H MH
Sbjct: 170 TVFADQPGAVAAPTAGLHFTDEVFAECAKNGADFADVTLHTGIGTFQPVSCEDLSEHQMH 229
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
SE +++ TA+ + K GGRI+++GTTS+R LET I+ G T IF+ P
Sbjct: 230 SEFYELNSVTAEKIRQAKKNGGRIIAIGTTSVRTLETCADPKNFISSGQGKTQIFLYPPK 289
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ + D L++NFHLPKSTLLML+S F EE K Y+ AI RF+SYGD L+
Sbjct: 290 QPQVTDCLLTNFHLPKSTLLMLISTFFPREEVLKAYEQAIEEKMRFFSYGDCMLI 344
>gi|220907192|ref|YP_002482503.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cyanothece
sp. PCC 7425]
gi|219863803|gb|ACL44142.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Cyanothece
sp. PCC 7425]
Length = 381
Score = 418 bits (1074), Expect = e-115, Method: Composition-based stats.
Identities = 149/359 (41%), Positives = 199/359 (55%), Gaps = 20/359 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +D+ LP + IA PV PRD +RL+VV C L DLP L S D +V N
Sbjct: 27 LSSYDYLLPDALIAQAPVVPRDCSRLLVVQQEDHC-----HRLFQDLPQLLRSGDLLVMN 81
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NT+VI A+L G + + E E W +P + +K G + F
Sbjct: 82 NTRVIPARLIGSKLGGQSPLEVEALLLEEK--DDRHWLALVKPGRRLKPGSQIQFGD--- 136
Query: 123 QSRLEATV--IDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L+ATV ID G IL G LE++++ +G IPLPPYI Y
Sbjct: 137 ---LQATVLEIDPATRGRILAFDLAEGERLEQRLADLGKIPLPPYIK----DSPAAPEQY 189
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y G+VAAPTAGLHFT LL +L + GI F+TLHVG GTF PV+ + DH M
Sbjct: 190 QTVYNDRPGAVAAPTAGLHFTPELLDKLATQGIDHCFLTLHVGVGTFRPVEADHIQDHTM 249
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I T + + ++ GGRI++VGTT +R LE A E G + P+ G TN+FI PG
Sbjct: 250 HQEWLEIPPETVEKIQQTQAAGGRIIAVGTTVVRALEGAAQE-GSLKPFRGKTNLFIYPG 308
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
Y++R V+ L++NFHLPKS+L+MLVSA G + +YQ AI+ YRFYS+GD L+ +
Sbjct: 309 YQWRVVEGLITNFHLPKSSLMMLVSALIGRQRLLDLYQAAIAAQYRFYSFGDAMLILPE 367
>gi|222109585|ref|YP_002551849.1| s-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Acidovorax
ebreus TPSY]
gi|221729029|gb|ACM31849.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Acidovorax
ebreus TPSY]
Length = 366
Score = 418 bits (1074), Expect = e-115, Method: Composition-based stats.
Identities = 139/368 (37%), Positives = 204/368 (55%), Gaps = 23/368 (6%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDF+LP IA P R +RL+ + P +D + +LP L D +VF
Sbjct: 12 TLSDFDFELPELLIAQHPAPQRSGSRLL--DGRTAPP---TDRIFRELPDLLQPGDLLVF 66
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A++ G + ++ + ++ N + + SK G LH
Sbjct: 67 NDTRVVKARVFGEKAS-----GGKLELLIERVLTGNEVVAHMKVSKKPLPGATLHLAGGA 121
Query: 122 GQSRLEATVIDKWNTGE----ILLVFSISGIELERQISLVGTIPLPPYIARK-----RPI 172
+AT++ ++ + L + +G + G +PLPPYI R+ P
Sbjct: 122 AAGGFDATLLGRYPDADGPLFRLALRGPAGESPWELMERHGHLPLPPYIERQQAGGNDPH 181
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D YQT +A+ G+VAAPTA LHF +L+RL GI+ VTLHVGAGTF PVK
Sbjct: 182 AGEDSERYQTVFARAPGAVAAPTAALHFDDAVLARLAERGIERASVTLHVGAGTFQPVKT 241
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
E+ +H MHSE + T AL + RGGR+V+VGTT++R LE+ +G
Sbjct: 242 ENLAEHRMHSEWYEVPLATLAALERCRQRGGRVVAVGTTTVRTLESWAASG----QAAGD 297
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFITPG++F+ VD+L++NFHLPKSTL+MLVSAF G E ++Y+HA++ YRF+SYGD
Sbjct: 298 TSIFITPGFQFQVVDLLLTNFHLPKSTLMMLVSAFAGYEHIMQLYRHAVAQRYRFFSYGD 357
Query: 353 TSLLFQKR 360
LL + R
Sbjct: 358 CMLLERPR 365
>gi|197121715|ref|YP_002133666.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Anaeromyxobacter sp. K]
gi|238689888|sp|B4UID2|QUEA_ANASK RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|196171564|gb|ACG72537.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Anaeromyxobacter sp. K]
Length = 345
Score = 418 bits (1074), Expect = e-115, Method: Composition-based stats.
Identities = 152/362 (41%), Positives = 206/362 (56%), Gaps = 20/362 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP +A PV PRD++RLMV+ P P +DLP L D +V
Sbjct: 1 MRLSDFDFALPEGLVAQAPVTPRDASRLMVLAPGEGAPA---HRGFADLPELLAPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN---SWSVYARPSKVIKKGDILHF 117
FN+T+VI A+L G + ++ L + W + SK I++G +L F
Sbjct: 58 FNDTRVIPARLLGHKAS-----GGKVELLLCEPLEGGLGRRWRAMGQASKPIREGAVLTF 112
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
LEA V G + G ELE + G IPLPPYI +R DA D
Sbjct: 113 ------DGLEARVDGVEGEGFYRVTLDRQGPELEAALGRAGRIPLPPYI--RRAPDAEDA 164
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT +A+ GS AAPTAGLHFT LL+RL + GI+ VTLHVG GTF+P++ +D D
Sbjct: 165 ARYQTIWARAPGSAAAPTAGLHFTEPLLARLAARGIRRTAVTLHVGPGTFLPIRGDDLDL 224
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH E + A+ L + ++RGGRIV+VGTTS+R LE+A DG + G T +FI
Sbjct: 225 HRMHGERYEVSPAAAEELAATRARGGRIVAVGTTSVRTLESAWR-DGAVAAGPGRTELFI 283
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG+ F AVD +++NFHLP+STLL+LV AF G Y+ A++ YRF+SYGD L+
Sbjct: 284 RPGHPFHAVDAMVTNFHLPRSTLLVLVCAFGGQGRVLAAYREAVARGYRFFSYGDAMLVL 343
Query: 358 QK 359
++
Sbjct: 344 RR 345
>gi|311108310|ref|YP_003981163.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Achromobacter xylosoxidans A8]
gi|310762999|gb|ADP18448.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Achromobacter xylosoxidans A8]
Length = 352
Score = 418 bits (1074), Expect = e-114, Method: Composition-based stats.
Identities = 141/363 (38%), Positives = 203/363 (55%), Gaps = 27/363 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ V +F+++LPP IA P R +RL+ + + D +DL A L D ++
Sbjct: 5 LTVADFNYELPPELIAQAPAAERTGSRLLHLDG----AGQLHDRQFADLAALLRPQDLLI 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+LNG + +I + P+ + R SK G +L
Sbjct: 61 FNDTRVIKARLNGHKI-----TGGKIEVLVERITEPDRVLAHVRASKSPGPGMVLRLADA 115
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ATV+ + L G L+ + G PLPPYI + D D Y
Sbjct: 116 -----FDATVLGREGE---LFDIRFPGPVLD-LLDAHGATPLPPYITHE--ADTGDDERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF L RL ++G++ FVTLHVGAGTF PV+V++ DH+M
Sbjct: 165 QTVYAREPGAVAAPTAGLHFDQPTLDRLAAMGVERAFVTLHVGAGTFQPVRVDNLADHVM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-------DGIINPWSGFT 293
H+E + T A+ + +SRGGR+++VGTTS+R LE+A + + G T
Sbjct: 225 HAEWFTVPQATVDAIAAARSRGGRVIAVGTTSVRALESAAAQTEGRTAPGLPLAAAQGDT 284
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+FITPGYR+R +D L++NFHLP+STLLMLVSA G+E ++ Y HA++ YRF+SYGD
Sbjct: 285 RLFITPGYRYRVIDALVTNFHLPQSTLLMLVSALAGVEPIRRAYAHAVAERYRFFSYGDA 344
Query: 354 SLL 356
+
Sbjct: 345 MFI 347
>gi|34496443|ref|NP_900658.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Chromobacterium violaceum ATCC 12472]
gi|46576922|sp|Q7NZD4|QUEA_CHRVO RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|34330296|gb|AAQ58662.2| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Chromobacterium violaceum ATCC 12472]
Length = 340
Score = 417 bits (1073), Expect = e-114, Method: Composition-based stats.
Identities = 155/359 (43%), Positives = 217/359 (60%), Gaps = 20/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+ LP + IA P R ++RL+ V +SD +DLP+ L + D +V
Sbjct: 1 MQLSDFDYHLPEALIAQHPPAERGASRLLHVDGMT-----LSDLSFADLPSRLQAGDLLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + ++ + + ++ + R SK K G L F
Sbjct: 56 FNDTRVIRARLFGEKAS-----GGKVEALIERVLDDHTALAHVRASKSPKPGSRLIF--- 107
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
R EA ++++ ++ + + ++ + + G +PLPPYI R D D Y
Sbjct: 108 --AGRWEAEMVERHDS--MFKLRFLAEENVYDILEASGKLPLPPYIERSAEHD--DDERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ QG+VAAPTAGLHFT +L+ L + GI FVTLHVGAGTF PVKV++ +H M
Sbjct: 162 QTVYAREQGAVAAPTAGLHFTDAMLATLQAQGIATAFVTLHVGAGTFQPVKVDNVAEHKM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSEI I T A+ + ++RGGR+V+VGTTS+R LE+A G + G T+IFITPG
Sbjct: 222 HSEIYDIPQATVDAIAAARARGGRVVAVGTTSVRALESAARH-GELKAGRGETDIFITPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRFR VD L++NFHLPKSTLLMLVSAF G +E + Y+HA+ YRF+SYGD LL +K
Sbjct: 281 YRFRVVDRLLTNFHLPKSTLLMLVSAFAGYDEIFQAYRHAVEKEYRFFSYGDAMLLEKK 339
>gi|330815590|ref|YP_004359295.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia gladioli BSR3]
gi|327367983|gb|AEA59339.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia gladioli BSR3]
Length = 350
Score = 417 bits (1073), Expect = e-114, Method: Composition-based stats.
Identities = 143/362 (39%), Positives = 201/362 (55%), Gaps = 21/362 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDFDLPP IA + R ++RL+ V ++ P ++D +DLP + + D +VF
Sbjct: 3 KLSDFDFDLPPELIAQTALPERSASRLLEVDGSV-APTRLTDRRFTDLPECIGAGDLLVF 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKV+ A+ G + +I + + + R SK +G L
Sbjct: 62 NDTKVLKARFFGQKAS-----GGKIEVLVERVIGSRTVLAQVRSSKSPVEGSTLRLAEA- 115
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
E TV ++ L + I G +PLPPYI DA D YQ
Sbjct: 116 ----FEVTVGERVEPFFTLHFPE----DCLALIERHGRLPLPPYIEHD--PDATDETRYQ 165
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A G+VAAPTAGLHF LL+ L + G++ +TLHVGAGTF PV+V++ +H MH
Sbjct: 166 TVFASNPGAVAAPTAGLHFDEALLATLRARGVETATLTLHVGAGTFQPVRVDNIAEHKMH 225
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT----TEDGIINPWSGFTNIFI 297
SE + + + ++RGG++V+VGTTS+R LE A E + P T+IFI
Sbjct: 226 SEWYELSDTLVAQIAATRARGGKVVAVGTTSMRALEAAARDAQREGRALAPTRAETDIFI 285
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGY FR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI+ YRF+SYGD LL
Sbjct: 286 TPGYAFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIRDAYRHAIAERYRFFSYGDAMLLT 345
Query: 358 QK 359
++
Sbjct: 346 RR 347
>gi|254282955|ref|ZP_04957923.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [gamma
proteobacterium NOR51-B]
gi|219679158|gb|EED35507.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [gamma
proteobacterium NOR51-B]
Length = 358
Score = 417 bits (1073), Expect = e-114, Method: Composition-based stats.
Identities = 139/357 (38%), Positives = 199/357 (55%), Gaps = 12/357 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+ ++F FDLP IA P+ R S+RL+V+ + +D+ +N D +V
Sbjct: 1 MLRQDFQFDLPGELIAQEPLAERSSSRLLVLEGASGD---LFHKQFTDIVDLINPEDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L GV+ + + + + S R SK + G ++ S
Sbjct: 58 FNNTKVLPARLFGVK-----QTGGRVEILIERLRADGSAVAQVRASKTPRDGAAIYITSD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + E V G + L+ G + + G +PLPPYI RP + D Y
Sbjct: 113 EESDKSEFYVRVVGREGSMYLLEPEVG-DWREIMRRFGHMPLPPYI--DRPDNESDQDRY 169
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA +G+VAAPTAGLHF NLL L + G+ VTLHVGAGTF PV+ E +DH M
Sbjct: 170 QTVYASKEGAVAAPTAGLHFDRNLLRDLSAKGVASVEVTLHVGAGTFQPVRAERIEDHHM 229
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + +A+++ + GGR+V+VGTT++R LE A G + P+ G T+IF+ PG
Sbjct: 230 HAETIDVGLTVCEAVDACRDGGGRVVAVGTTAVRSLEAAAAA-GSLVPFHGDTDIFLYPG 288
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
FR VD +++NFHLP+STL+MLVSAF G E Y+ A+S YRF+SYGD +
Sbjct: 289 RPFRVVDAMITNFHLPESTLIMLVSAFAGREHVLAAYRAAVSQRYRFFSYGDAMFIT 345
>gi|160872276|ref|ZP_02062408.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rickettsiella grylli]
gi|159121075|gb|EDP46413.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rickettsiella grylli]
Length = 350
Score = 417 bits (1073), Expect = e-114, Method: Composition-based stats.
Identities = 122/353 (34%), Positives = 193/353 (54%), Gaps = 16/353 (4%)
Query: 4 KEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNN 63
++F ++LP IA P R +RL+ ++ V+ D+ F+N D +V NN
Sbjct: 13 EDFFYELPEKLIAHYPTEQRTDSRLLCLNKTTG---VMQHKKFKDILDFINPGDLLVLNN 69
Query: 64 TKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQ 123
T+VI A+L + ++ + + + SK +++G L +
Sbjct: 70 TQVIPARLFAKKI-----TGGKVEILIERILERQRILAQLKSSKSLQRGTRLIL-----E 119
Query: 124 SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTT 183
+ + ++++ T L+ + + ++ +G IPLPPYI +R + D YQT
Sbjct: 120 NEMHVEIVNRTETMYELVFLIEPNLSILELLNQIGHIPLPPYI--QRADELFDGERYQTV 177
Query: 184 YAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSE 243
+A + G++AAPTAGLHF +LL+ L + G+ + ++TLHVGAGTF P++ + +DH MH E
Sbjct: 178 FASVPGAIAAPTAGLHFDEDLLTELKTKGVHIAYITLHVGAGTFQPIRSDRLEDHRMHHE 237
Query: 244 IGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRF 303
+ + + K RI++VGTT +R LETA + G INP +G TN+FI PG+ F
Sbjct: 238 YVTVSKTVCEQIIRAKQLNKRIIAVGTTVVRSLETAALQ-GQINPLAGETNLFIYPGFNF 296
Query: 304 RAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+D L++NFHLP+STLLMLV A G E + YQ A+ YRF+SYGD +
Sbjct: 297 HCIDALITNFHLPRSTLLMLVCALGGYELIMQAYQEAVFQGYRFFSYGDAMWI 349
>gi|329956430|ref|ZP_08297027.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
clarus YIT 12056]
gi|328524327|gb|EGF51397.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
clarus YIT 12056]
Length = 352
Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats.
Identities = 123/363 (33%), Positives = 188/363 (51%), Gaps = 15/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P RD +RLMV+H I + D+ + + D +
Sbjct: 1 MKLSQFKFKLPEEKIALHPTRYRDESRLMVLHRKTG---EIEHRMFKDILEYFDDKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK----EKTGARIEVFLLRELNEELRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDARD 176
D + A VID + L F G E ++ + +G PLP I RP++ D
Sbjct: 114 EDD---SMVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYALGETPLPHSII-NRPVEPED 169
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+Q+ +A+ +G+V APTA LHF+ L+ R+ GI ++TLH G G F + VED
Sbjct: 170 SERFQSIFARNEGAVTAPTASLHFSRELMKRMEIKGIDFAYITLHAGLGNFRDIDVEDLT 229
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H SE + + +N K ++ +VGTT +R +E+ + DG + + G+TN F
Sbjct: 230 KHKTDSEQMIVTEDAVKVVNRTKDLNRQVCAVGTTVMRAIESTVSTDGHLKEYEGWTNKF 289
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + ++SNFH+P STLLM+V+AF G E+ + Y A+ YRF +YGD L+
Sbjct: 290 IFPPYDFTVANAMVSNFHMPLSTLLMIVAAFGGYEQVMEAYNVALKEDYRFGTYGDAMLI 349
Query: 357 FQK 359
K
Sbjct: 350 TDK 352
>gi|289208484|ref|YP_003460550.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thioalkalivibrio sp. K90mix]
gi|288944115|gb|ADC71814.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thioalkalivibrio sp. K90mix]
Length = 355
Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats.
Identities = 143/358 (39%), Positives = 198/358 (55%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD++LP IA P+ R S+RL+V+ + D + + L D +V
Sbjct: 1 MRVSDFDYELPQELIAQYPLPERGSSRLLVLEDKQA-----EDATFGAIESLLRPGDLLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A++ G + ++ + SP R S+ K G LH
Sbjct: 56 LNDTRVIPARVFGQKAS-----GGQVEVLVERIESPTQVLAMVRASRAPKPGTRLHLADA 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
V D+ G + + G ++ + G IPLPPYI +R + D Y
Sbjct: 111 -----FTVEVTDR--QGPFFRLRLVDGADMLALLKQHGHIPLPPYI--ERADEGSDAERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +G+VAAPTAGLHF LL RL + G++ VTLHVGAGTF PVKV+DT H M
Sbjct: 162 QTVFARKEGAVAAPTAGLHFDDALLGRLRAQGVETATVTLHVGAGTFQPVKVDDTSRHEM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + A+ + K RGGR+V+VGTT +R LETA E G + P+ G T +FI PG
Sbjct: 222 HAEWLEVGPEACAAVAACKVRGGRVVAVGTTCVRSLETAAAE-GELTPFQGETRLFIQPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRFR VD +++NFHLP+STLLMLV+AF G Y HA+++ YRF+SYGD L
Sbjct: 281 YRFRVVDRMVTNFHLPQSTLLMLVAAFAGYRRILDAYAHAVANRYRFFSYGDAMWLAP 338
>gi|89069964|ref|ZP_01157296.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Oceanicola
granulosus HTCC2516]
gi|89044412|gb|EAR50543.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Oceanicola
granulosus HTCC2516]
Length = 349
Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats.
Identities = 162/360 (45%), Positives = 225/360 (62%), Gaps = 13/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA+RP PR SARL++ + I D +VS+LP L D +V
Sbjct: 1 MQLSDFDFDLPDELIAVRPARPRSSARLLLAEGD-----AIGDRIVSELPRILQPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREK--EISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L G R E I TL + WS +P + +++G+ + F
Sbjct: 56 LNDTRVIPARLTGTRTRPGAAGEGVARIEVTLLEPRADGLWSALVKPLRKLREGEEVVF- 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
RL A++ + G+ LL F+ +G + + ++ G +PLPPYIA +RP DA D
Sbjct: 115 ----SPRLTASLEAR-EAGQGLLRFNCTGEDFDAALAEAGAMPLPPYIAARRPADAADKD 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF + LL + + G+++ VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVWAERPGAVAAPTASLHFDAPLLEAIAARGVEITRVTLHVGAGTFLPVKVEDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A + + + GGR++ VGTT+LRL+ETA G I PW+G T+IFI
Sbjct: 230 RMHAEWGEVTEAAAAEIAATRGAGGRVIPVGTTALRLIETAARASGEIAPWTGETDIFIY 289
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ FR D LM+NFHLP+STL+MLVSAF G+E + +Y HA++ YRF+SYGD SLL
Sbjct: 290 PGFEFRVADGLMTNFHLPRSTLMMLVSAFMGMERVRAIYAHAVAERYRFFSYGDASLLLP 349
>gi|322419806|ref|YP_004199029.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Geobacter
sp. M18]
gi|320126193|gb|ADW13753.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Geobacter
sp. M18]
Length = 341
Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats.
Identities = 137/356 (38%), Positives = 197/356 (55%), Gaps = 16/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+DLPP IA P RD++RL+ + + + + V+ + + + D +V
Sbjct: 1 MRLSDFDYDLPPELIAQHPASRRDASRLLTLDRSNGA---VGETTVAAIASRFRAGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G + E+ + WS + SK K G +
Sbjct: 58 LNDTRVIPARLKGQKESGGA---AEVFLVRRVPGDAEIWSCLIKASKSPKDGTRIILPEG 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ATV+ + GE ++F + + G++PLPPYI KR D Y
Sbjct: 115 -----VTATVVSR-EEGEWQVLFQG-CDDFMCWLEGAGSMPLPPYI--KRAPAGEDLERY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +G+VAAPTAGLHFT +L + G+++ VTLHVG GTFMPV+VE+ H M
Sbjct: 166 QTVFAREKGAVAAPTAGLHFTPEILDEIRGRGVEIAPVTLHVGLGTFMPVRVEELSRHTM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E+ I TA+A+ +S GGR++++GTTSLR LE A G + +IFI PG
Sbjct: 226 HRELYRIPEATARAIRRTRSAGGRVIALGTTSLRALEHAAAS-GELAAGEREADIFILPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRFR VD L++NFHLPKSTL MLV AF G E Y+ A+ +RF+SYGD +
Sbjct: 285 YRFRVVDALITNFHLPKSTLFMLVCAFAGKEVMLDAYREAVERRFRFFSYGDAMFI 340
>gi|34541200|ref|NP_905679.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas gingivalis W83]
gi|34397516|gb|AAQ66578.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas gingivalis W83]
Length = 350
Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats.
Identities = 125/361 (34%), Positives = 184/361 (50%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP IAL P RD +R+MVVH I + D+ + + D V
Sbjct: 1 MKLSKFKFNLPEELIALEPTKFRDESRMMVVHRRTG---EIEHRVFKDILEYFDKGDTFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FNNT+V A+L G + + +I L ++ W V P++ I+ G+ L+F
Sbjct: 58 FNNTRVFPARLYGNK----EKTGAQIEVFLLRELNERLKLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
+ + L A VID + L F G E + + +G PLP YI R ++ D
Sbjct: 114 NDE---ELVAEVIDNTTSRGRTLRFLYDGSHDEFKELLFQLGQTPLPKYI--DRDVNKED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQ+ +AK++G+V AP A LHF+ L+ RL ++T+H G + + VED
Sbjct: 169 PERYQSIFAKVEGAVVAPAASLHFSRELMKRLEIKDCHFSYITVHHALGAYRDIDVEDLT 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE +I + +N +I +VGT+ LR LETA + DG + P+ G+TN F
Sbjct: 229 KHKMDSEEMYITEESCININRSWDEEKKICAVGTSILRALETAVSTDGHLKPFEGWTNRF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F L++NFH+P STLLM+ +AF G E Y A+ YRF +YGD L+
Sbjct: 289 IFPPYEFHLPSALVTNFHMPLSTLLMMTAAFGGHELIMSAYDLAVKEKYRFGAYGDAMLI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|163736612|ref|ZP_02144031.1| Queuosine biosynthesis protein [Phaeobacter gallaeciensis BS107]
gi|161390482|gb|EDQ14832.1| Queuosine biosynthesis protein [Phaeobacter gallaeciensis BS107]
Length = 356
Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats.
Identities = 165/360 (45%), Positives = 227/360 (63%), Gaps = 14/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP RIA RP PR SARL+V + I D V++L +L S D +V
Sbjct: 1 MKLSDFDFDLPDDRIATRPAVPRSSARLLVAEGDR-----IRDARVANLGQWLRSGDRLV 55
Query: 61 FNNTKVITAQLNGVRF--CHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+L+G+R ++ TL + SW+ +P K +K G+ + F
Sbjct: 56 LNDTKVIPARLSGLRHRDTAQGPMAAKVEVTLLDPGADGSWAALLKPLKKVKLGEEIIF- 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
L AT +++ G+ L F++SG + + ++ G +PLPPYIA KRP D +D
Sbjct: 115 ----SDTLSAT-LERIEDGQGHLKFNLSGTDFDAALAEAGAMPLPPYIAAKRPADEQDKT 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LL+ L + G+++ +VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVWARNSGAVAAPTASLHFDDALLAELQAKGVEISYVTLHVGAGTFLPVKVEDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A A + + K+ GGR++ VGTT+LRL+E+A + G I PW G T+IFI
Sbjct: 230 RMHAEWGRVSAEAATEIAATKAAGGRVIPVGTTALRLIESA-GQSGAIQPWEGDTDIFIY 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ F D LM+NFHLPKSTLLMLVSA G + + +Y HA++ YRF+SYGD SLL
Sbjct: 289 PGFTFHVADALMTNFHLPKSTLLMLVSALMGQDRIRAIYDHALAEEYRFFSYGDASLLIP 348
>gi|50083827|ref|YP_045337.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter sp. ADP1]
gi|81613338|sp|Q6FEJ3|QUEA_ACIAD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|49529803|emb|CAG67515.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein ) [Acinetobacter sp. ADP1]
Length = 344
Score = 416 bits (1071), Expect = e-114, Method: Composition-based stats.
Identities = 136/359 (37%), Positives = 195/359 (54%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F+FDLP IA P+ R ++RL+ + DH +D+ +N D +V
Sbjct: 1 MQLSDFNFDLPDELIARYPLDTRSASRLLHLD----AHGHYHDHAFTDILDLINDGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G R I + + + + S K G L
Sbjct: 57 LNDTKVMKARLKGKRAS-----GGAIEILVERMLDNQIAHCHIKASNTPKAGAELFV--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G++ ++ TV + L V S L + G +P+PPY R+ + D Y
Sbjct: 109 -GENGIKVTVQGRHEN---LFVVEFSEPIL-SVLDRYGQLPIPPYFNRE--AEEIDTERY 161
Query: 181 QTTY--AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
QT + + SVAAPTA LHF +LL +L + I+ FVTLHVGAGTFMPV+ +D +H
Sbjct: 162 QTVFHDPQKIASVAAPTASLHFDQDLLEKLAAKNIQKTFVTLHVGAGTFMPVRTDDIKNH 221
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDG-IINPWSGFTNIFI 297
IMHSE + TA+ + K+RG ++++VGTT+ R LE+A +G I+ W+G T IFI
Sbjct: 222 IMHSEWCDVPESTAELIRQTKARGNKVIAVGTTATRALESAAQANGGKIDAWTGDTQIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+F VD L++NFHLP+STLLMLVSA Y+HA+ YRF+SYGD L+
Sbjct: 282 YPGYQFCVVDRLITNFHLPESTLLMLVSALSNRNNILSAYEHAVQSKYRFFSYGDAMLI 340
>gi|94971507|ref|YP_593555.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Koribacter versatilis Ellin345]
gi|94553557|gb|ABF43481.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Candidatus
Koribacter versatilis Ellin345]
Length = 366
Score = 416 bits (1071), Expect = e-114, Method: Composition-based stats.
Identities = 140/369 (37%), Positives = 198/369 (53%), Gaps = 21/369 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+V +FD+ LPP IA P+ R + R+M V I + P L+ +D +VF
Sbjct: 4 LVSDFDYLLPPELIAQHPLADRSATRMMHVRRYGG--PEIDNLQFRSFPDLLSPDDLVVF 61
Query: 62 NNTKVITAQLNGVRFCHINRR------------EKEISCTLHMRV--SPNSWSVYARPSK 107
NNT+V+ A+L G R + + L ++ P W RP +
Sbjct: 62 NNTRVLPARLFGRRSGSRAQTLSPQNPASREFLTGRVEVLLTRQIQADPPVWQALVRPGR 121
Query: 108 VIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIA 167
+ G+ + F L A ++++ GE L F+ + ++ +G IPLPPYI
Sbjct: 122 KLGVGEKIFFGEDAEHPELTAEILERGEFGERTLRFTG---DFWGTVNRIGHIPLPPYI- 177
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
RP A D YQT +A+ GSVAAPTAGLHFT +L R+ + GI+ +TLHVG GTF
Sbjct: 178 -DRPDTAEDREQYQTIFARELGSVAAPTAGLHFTREILDRIAARGIETAELTLHVGLGTF 236
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN 287
P++ E+ +++ +H E I A A+ LN + G RIV+VGTT +R LE A +
Sbjct: 237 QPLRHENVEENHLHLERYSISADAAEKLNRARREGRRIVAVGTTIVRTLEFAAQQSKEFG 296
Query: 288 PWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
SG NIFI PGY FR V +++NFHLPKS+LLMLVSAF G + Y HA++ YRF
Sbjct: 297 EQSGDANIFIYPGYEFRVVGGMLTNFHLPKSSLLMLVSAFAGTSRALRAYNHAVAERYRF 356
Query: 348 YSYGDTSLL 356
+SYGD +
Sbjct: 357 FSYGDCMFI 365
>gi|260427502|ref|ZP_05781481.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Citreicella
sp. SE45]
gi|260421994|gb|EEX15245.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Citreicella
sp. SE45]
Length = 349
Score = 416 bits (1071), Expect = e-114, Method: Composition-based stats.
Identities = 165/360 (45%), Positives = 225/360 (62%), Gaps = 13/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP + IA RP PR SARL+V + ++D +V DL +L D +V
Sbjct: 1 MKLSDFDFDLPEALIATRPANPRSSARLLVADGDT-----LTDAVVRDLTQWLRPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINR--REKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+L+G R + +I TL + W+ +P K +++G+ + F
Sbjct: 56 LNDTKVIPARLSGTRERDGAQGLTRAQIEVTLLEPRADGCWAALVKPLKKLREGETVVFS 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
L A V++ + G+ LL F++ G + + ++ G +PLPPYIA +R DA+D
Sbjct: 116 DA-----LSA-VLESRDEGQGLLRFNLVGEDFDAALAEAGAMPLPPYIAARRAADAQDKQ 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ +G+VAAPTA LHF LL L + G+ VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVWAERKGAVAAPTASLHFDEPLLESLRAHGVAFTKVTLHVGAGTFLPVKVEDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH E G + A + + K+ GGR++ VGTT+LRLLETA + G I PW G T+IFI
Sbjct: 230 RMHGEWGEVSDSAAAEIAATKAAGGRVIPVGTTALRLLETAARDTGAIAPWQGVTDIFIY 289
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ FR D LM+NFHLPKSTL+MLVSA G E K++Y HAI+ YRF+SYGD+SLL
Sbjct: 290 PGFTFRVTDALMTNFHLPKSTLMMLVSALMGQERMKRIYDHAITERYRFFSYGDSSLLIP 349
>gi|297566044|ref|YP_003685016.1| S-adenosylmethionine/ tRNA-ribosyltransferase-isomerase
[Meiothermus silvanus DSM 9946]
gi|296850493|gb|ADH63508.1| S-adenosylmethionine/ tRNA-ribosyltransferase-isomerase
[Meiothermus silvanus DSM 9946]
Length = 338
Score = 416 bits (1071), Expect = e-114, Method: Composition-based stats.
Identities = 148/362 (40%), Positives = 203/362 (56%), Gaps = 29/362 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++++D+ LPP+ IA PRDS+RLMVVH + + D+ +L D +V
Sbjct: 1 MPLEDYDYSLPPALIAQSGAEPRDSSRLMVVHRGTG---QLEHRIFRDITEYLRPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N +KVI A+ N I L + P+ W +P+K K L F
Sbjct: 58 LNQSKVIPARTFAT-----NAHGTRIEVLLVRELKPDLWEAMLKPAKRAK--GWLRFADG 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A V+ + G +L F+ + + +G PLPPYI + D Y
Sbjct: 111 -----LMAEVVKVEDDGTRVLHFTGG---VWEHLERIGKTPLPPYIHA-----SIDPQRY 157
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GSVAAPTAGLHFT LL R+ +G++++FVTLHVG GTF PV+ ED D H+M
Sbjct: 158 QTVYAKTPGSVAAPTAGLHFTPQLLQRIYEMGVELHFVTLHVGPGTFKPVQ-EDPDRHLM 216
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-----TTEDGIINPWSGFTNI 295
H E I TAQA+N K+ G RI++VGTT +R LE+A ++ G + G T +
Sbjct: 217 HLEPYEIPPETAQAVNQAKAEGRRIIAVGTTVVRTLESAWENSLSSASGRVRAGVGETRL 276
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PG++F+ +D L++NFHLPKSTLLMLVSAF G + T + Y+ A+ YRFYS GD L
Sbjct: 277 FIRPGFKFKVIDALITNFHLPKSTLLMLVSAFTGYDLTMRAYRMAVEERYRFYSLGDAML 336
Query: 356 LF 357
+
Sbjct: 337 IL 338
>gi|160888113|ref|ZP_02069116.1| hypothetical protein BACUNI_00521 [Bacteroides uniformis ATCC 8492]
gi|270295140|ref|ZP_06201341.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. D20]
gi|317478138|ref|ZP_07937313.1| tRNA ribosyltransferase-isomerase [Bacteroides sp. 4_1_36]
gi|156862424|gb|EDO55855.1| hypothetical protein BACUNI_00521 [Bacteroides uniformis ATCC 8492]
gi|270274387|gb|EFA20248.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. D20]
gi|316905736|gb|EFV27515.1| tRNA ribosyltransferase-isomerase [Bacteroides sp. 4_1_36]
Length = 352
Score = 416 bits (1071), Expect = e-114, Method: Composition-based stats.
Identities = 121/363 (33%), Positives = 189/363 (52%), Gaps = 15/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P RD +RL+V+H I + D+ + + D +
Sbjct: 1 MKLSQFKFKLPEEKIALHPTKYRDESRLLVLHRKTG---EIEHKMFKDVLDYFDDKDVFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK----EKTGARIEVFLLRELNEELRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDARD 176
D + A VID + L F G E ++ + +G PLP I RP++ D
Sbjct: 114 DDD---SMVAEVIDNTTSRGRTLRFLYDGPHDEFKKALYALGETPLPHSII-NRPVEPDD 169
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+Q+ +A+ +G+V APTA LHF+ L+ R+ GI ++TLH G G F + VED
Sbjct: 170 AERFQSIFARNEGAVTAPTASLHFSRELMKRMEIKGIDFAYITLHAGLGNFRDIDVEDLT 229
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H SE ++ + +N K ++ +VGTT +R +E+ + DG + + G+TN F
Sbjct: 230 KHKTDSEQMIVNEEAVRIVNHAKDLNRQVCAVGTTVMRAIESTVSTDGHLKEYEGWTNKF 289
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + ++SNFH+P STLLM+V+AF G E+ + Y A+ YRF +YGD L+
Sbjct: 290 IFPPYDFTVANAMISNFHMPLSTLLMIVAAFGGYEQVMEAYNVALKEEYRFGTYGDAMLI 349
Query: 357 FQK 359
+
Sbjct: 350 TDR 352
>gi|84684975|ref|ZP_01012875.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Maritimibacter alkaliphilus HTCC2654]
gi|84667310|gb|EAQ13780.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodobacterales bacterium HTCC2654]
Length = 355
Score = 416 bits (1071), Expect = e-114, Method: Composition-based stats.
Identities = 163/358 (45%), Positives = 223/358 (62%), Gaps = 14/358 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ ++DFDLP IA RP PR SARL+V I+D +V+DL +L D +V
Sbjct: 9 RLSDYDFDLPEDLIATRPARPRSSARLLVAER-----ARITDGVVTDLVDWLRPGDRLVL 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMR-VSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G R + I TL P +WS +P + +K G+ + F +
Sbjct: 64 NDTRVIPARLEGTRTRG--EAQARIEVTLLAPDAQPGAWSALVKPLRKVKDGETIDFAAG 121
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L ATV+ + G+ +L F+++G + ++ G +PLPPYI KR DA+D DY
Sbjct: 122 -----LSATVLSRSE-GQAVLTFNLTGAAFDAALAEAGRMPLPPYIEAKRRADAQDREDY 175
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTA LHF LL+ L + G+ VTLHVGAGTF+PVKV+D DH M
Sbjct: 176 QTVWARQTGAVAAPTASLHFDDALLAALDARGVARTHVTLHVGAGTFLPVKVDDVSDHKM 235
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G + A +N+ ++ GGRI+ VGTT+LRL+E+A G I PW G T+IFI PG
Sbjct: 236 HAEWGEVTEAAAAEINATRAAGGRIIPVGTTALRLIESAAAAPGRIEPWRGPTDIFIRPG 295
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
Y F+ D LM+NFHLPKSTL+MLVSA G+E +++Y HAI + YRF+SYGD SLL
Sbjct: 296 YAFKITDGLMTNFHLPKSTLMMLVSALMGMERMREVYAHAIENRYRFFSYGDASLLLP 353
>gi|254246280|ref|ZP_04939601.1| NAS-adenosylmethionine [Burkholderia cenocepacia PC184]
gi|124871056|gb|EAY62772.1| NAS-adenosylmethionine [Burkholderia cenocepacia PC184]
Length = 355
Score = 416 bits (1070), Expect = e-114, Method: Composition-based stats.
Identities = 143/362 (39%), Positives = 200/362 (55%), Gaps = 21/362 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDF+LPP IA + R ++RL+ V ++ P + D ++LP+ + D +VF
Sbjct: 3 TLSDFDFNLPPELIAQTALPDRTASRLLEVDGSV-APARLVDRHFAELPSCIAPGDLLVF 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKV+ A+ G + +I + ++ R SK G L
Sbjct: 62 NDTKVLKARFFGQKAS-----GGKIEVLIERVTGTHTALAQIRASKSPGAGTTLRLADA- 115
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
E TV ++ L F ++L I G +PLPPYI DA D YQ
Sbjct: 116 ----FEVTVGERVEPF-FTLHFPAPCLDL---IEQHGRLPLPPYIEHD--ADATDETRYQ 165
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YA G+VAAPTAGLHF LL +L ++G++ +TLHVGAGTF PV+VE+ +H MH
Sbjct: 166 TVYASNPGAVAAPTAGLHFDQPLLEKLDAMGVERATLTLHVGAGTFQPVRVENIAEHKMH 225
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI----INPWSGFTNIFI 297
SE + + + ++RGG +++VGTTS+R LE A + T+IFI
Sbjct: 226 SEWYDLPQSLVDKIAATRARGGNVIAVGTTSMRALEAAARSADEAGRPLAATQAETDIFI 285
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI YRF+SYGD LL
Sbjct: 286 TPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIRAAYRHAIEERYRFFSYGDAMLLT 345
Query: 358 QK 359
++
Sbjct: 346 RR 347
>gi|300114138|ref|YP_003760713.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Nitrosococcus watsonii C-113]
gi|299540075|gb|ADJ28392.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Nitrosococcus watsonii C-113]
Length = 344
Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats.
Identities = 135/360 (37%), Positives = 200/360 (55%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F ++LP IA P R +RL+ + + ++ D +LP L++ D +V
Sbjct: 1 MQLSDFTYNLPKQLIAQYPPKRRGGSRLLSLEGSSG---IVKDQQFIELPELLSTGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A++ GV+ +I + + + + + + G L
Sbjct: 58 FNNTKVIPAKIQGVKDS-----GGKIEVLIERFLDQHRALAHVWANNPPRAGQSLV---- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ +E V + + + + L + + +G IPLPPYI RK + D Y
Sbjct: 109 -MEQSVEVEVRKRIK--GLFELRFLDPRPLPQLLEAIGQIPLPPYIQRK--TTSVDKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA G++AAPTAGLHF LL RL + GI+ ++TLHVGAGTF PV+V++ H M
Sbjct: 164 QTVYASRPGAIAAPTAGLHFDKLLLKRLQAQGIQSGYITLHVGAGTFQPVRVKNITQHQM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + + GGRIV+VGTT++R LE A+ + GII P+ G T IFI PG
Sbjct: 224 HSEYVEVSEQICTQIRDTQQAGGRIVAVGTTTVRALEAASAK-GIIAPYQGETEIFIFPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRFR V+ L++NFHLP++TLLMLV AF G ++ Y+HA+ YRF+SYGD + + +
Sbjct: 283 YRFRTVNALITNFHLPETTLLMLVCAFAGSKQVLTAYRHAVKKGYRFFSYGDAMFITESK 342
>gi|160902969|ref|YP_001568550.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Petrotoga
mobilis SJ95]
gi|160360613|gb|ABX32227.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Petrotoga
mobilis SJ95]
Length = 341
Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats.
Identities = 123/356 (34%), Positives = 189/356 (53%), Gaps = 23/356 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+++++++LP IA PV PRDS +LMV++ + I + D+ +L D +V N
Sbjct: 8 LEQYNYELPEELIAQEPVEPRDSCKLMVLNRRVKS---IEHKVFRDIKNYLRPGDLLVLN 64
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTL-HMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NT+VI A+L G + ++ L + +W +P IKKG+ L F
Sbjct: 65 NTRVIPARLYGKKE-----TGAKVEVLLLEKDGNDKTWKALVKPGGKIKKGNKLIF---- 115
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ L TV++ G +L ++ +G +PLPPYI ++ D YQ
Sbjct: 116 -EDDLVCTVVEHLEDGSRIL--EFDDPNFFSKLPKIGEVPLPPYIKKQID----DPEKYQ 168
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
TTYAK G+VAAPTAGLHFT L+ L G++ VTLHVG GTF PV D +H +H
Sbjct: 169 TTYAKEDGAVAAPTAGLHFTQELIDELTDYGVRFAEVTLHVGLGTFRPVSAADIRNHQIH 228
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E + + + K+ G R+++ GTT +R LE+ + +G T+++I P +
Sbjct: 229 EEYYTVSKSVLRDIVRAKAEGKRVIATGTTVVRTLESIARNPDKL---AGKTDLYIYPPF 285
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+ +D +++NFHLPKS+LL LVSAF G + Y+ A YRF+S+GD +
Sbjct: 286 EFKIIDAMITNFHLPKSSLLFLVSAFAGQDFIMNSYEIAKEKKYRFFSFGDAMFII 341
>gi|39997714|ref|NP_953665.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Geobacter
sulfurreducens PCA]
gi|81701519|sp|Q749X2|QUEA_GEOSL RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|39984606|gb|AAR35992.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Geobacter
sulfurreducens PCA]
gi|298506648|gb|ADI85371.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Geobacter
sulfurreducens KN400]
Length = 343
Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats.
Identities = 146/357 (40%), Positives = 195/357 (54%), Gaps = 14/357 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V EFD+ LPP IA P+ RD+ RLM V + I + D +V
Sbjct: 1 MLVTEFDYHLPPELIAQEPLVQRDATRLMTVERDGGGIGEI---PFRGIVDLFRPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G + EI +W R SK + G +
Sbjct: 58 INDTRVIPARLLGRKESGGK---TEIFLVRRRPGDHETWHCLIRSSKPPRPGVTVLLPEG 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A V + + GE LV G + + G +PLPPYI R+ DA D Y
Sbjct: 115 -----VRAVVREPGD-GETWLVSFTPGEGFQEWLDRNGAMPLPPYIRRE--ADAADRDRY 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +G+VAAPTAGLH T+ LL + G++V VTLHVG GTFMP++VE +DH M
Sbjct: 167 QTVFARNRGAVAAPTAGLHMTAGLLDEIAGRGVRVAPVTLHVGLGTFMPIRVERLEDHRM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I TA A+N + GGR++++GTT R LE A DG I G +IFI PG
Sbjct: 227 HRERYHIPPATADAINGCRREGGRVIALGTTVCRTLEQAAAADGTIAAGEGEADIFIYPG 286
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YRF+AVD L++NFHLPKSTLLMLVSAF G + + Y A++ +RF+SYGD +F
Sbjct: 287 YRFKAVDALITNFHLPKSTLLMLVSAFAGRDLLFRAYGEAVARRFRFFSYGDAMFIF 343
>gi|113474574|ref|YP_720635.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Trichodesmium erythraeum IMS101]
gi|110165622|gb|ABG50162.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Trichodesmium erythraeum IMS101]
Length = 369
Score = 415 bits (1068), Expect = e-114, Method: Composition-based stats.
Identities = 139/371 (37%), Positives = 205/371 (55%), Gaps = 29/371 (7%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D++LP IA PV PRDS+RLMV+ + + DLP L D +V N
Sbjct: 8 IEAYDYELPQELIAQNPVVPRDSSRLMVIESLT-----HNHRIFRDLPDLLQPEDLLVLN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NT+VI A+L G + ++ L +++ +SW +P K G + F
Sbjct: 63 NTRVIPARLYGQKTS-----GAQVEILLLKQITNDSWLALVKPGKHFSAGTRIEFEPNSS 117
Query: 123 ---QSRLEATV--IDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+L+ATV ID+ G +L + + + G IP PPY+ + + +
Sbjct: 118 FTCDYKLQATVLAIDQETGGRVLQFYWPQEVSWLDLLKQFGHIPFPPYVTGSQALTEQ-- 175
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT Y+KI G++AAPTAGLHFT LL +L I F+TLHVG GTF PV+V+D
Sbjct: 176 --YQTVYSKIAGAIAAPTAGLHFTDELLYKLEQGNIGRAFITLHVGIGTFRPVEVKDITT 233
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDG----------IIN 287
H +HSE + + + ++ K++GGRI++VGTT +R +E A + +I
Sbjct: 234 HNIHSEWVEVSSLSVDKIHQTKAKGGRIIAVGTTVVRAIEAAALANDNYSTQESLIPLIR 293
Query: 288 PWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
P+S +T+IFI PGY++R VD L++NFHLP+S+LLMLVSA G + +YQ AI YRF
Sbjct: 294 PFSDYTDIFIYPGYKWRVVDGLITNFHLPRSSLLMLVSAMIGRKRLLSLYQDAIDQKYRF 353
Query: 348 YSYGDTSLLFQ 358
YS+GD +
Sbjct: 354 YSFGDAMFILP 364
>gi|218961722|ref|YP_001741497.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Cloacamonas acidaminovorans]
gi|167730379|emb|CAO81291.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Cloacamonas acidaminovorans]
Length = 346
Score = 415 bits (1068), Expect = e-114, Method: Composition-based stats.
Identities = 134/354 (37%), Positives = 185/354 (52%), Gaps = 17/354 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+D+ LP IA P R +RLM V I H + + L D ++ N
Sbjct: 8 TDTYDYYLPKELIAQFPAEKRTDSRLMQVKRQSR---EIYHHRFTAILELLKEGDLVIIN 64
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
++KV A+L + +I L +++ N+W A+P K +K LHF
Sbjct: 65 SSKVFPARLFATKE-----TGAKIEILLLHQLNENTWQCIAKPGKKLKSPQWLHFSDNLS 119
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
I + N+ I + + +I +G IPLPPYI R I D YQT
Sbjct: 120 G------YISQGNSEGIREIQFTCKTDFWDEIKRIGHIPLPPYIERSDTI--LDSERYQT 171
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YAK GS+AAPTAG HF + +L L G+ V LH+G GTF PVK + DH MHS
Sbjct: 172 VYAKENGSIAAPTAGFHFDAEILKALKKKGVLFSEVILHIGIGTFRPVKTKRITDHKMHS 231
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E+ I TA A+N K G R+V VGTTS+R +E+ +DG + S +T++FI PG+
Sbjct: 232 ELATIPEITAAAINLAKKEGRRVVCVGTTSVRSVESFW-QDGEMQSGSKWTDLFIYPGFN 290
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
F+ D L++NFHLPKSTLLM++SAF G E +K Y A+ YRF+SYGD +
Sbjct: 291 FKVTDALLTNFHLPKSTLLMMISAFGGWETIRKAYNIAVQEKYRFFSYGDAMFI 344
>gi|89890087|ref|ZP_01201598.1| S-adenosylmethionine, tRNA-ribosyltransferase-isomerase
[Flavobacteria bacterium BBFL7]
gi|89518360|gb|EAS21016.1| S-adenosylmethionine, tRNA-ribosyltransferase-isomerase
[Flavobacteria bacterium BBFL7]
Length = 350
Score = 415 bits (1068), Expect = e-114, Method: Composition-based stats.
Identities = 131/360 (36%), Positives = 189/360 (52%), Gaps = 16/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F + LP + IA P RD +RLMV+H I + D+ + +D V
Sbjct: 1 MKLSQFGYKLPENLIAQHPAENRDESRLMVLHKKTG---EIEHKMFKDVLDYFEEDDVFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
NNT+V A+L G + + I L ++P + W V P++ I+ G+ L+F
Sbjct: 58 TNNTRVFPARLYGNK----EKTGARIEVFLLRELNPTTKLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
+ L A VID + L F G E +++ +G PLP R ++ D
Sbjct: 114 EDE---SLVAEVIDNTTSRGRTLRFLFDGSYEEFRQKLKDLGETPLPR--ELGREVEEED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YA +G+VAAP AGLHF+ +LL RL GI +T+H+G GTF PV+VED
Sbjct: 169 EERYQTIYATNEGAVAAPVAGLHFSKHLLKRLEIKGIHRTAITMHIGLGTFAPVEVEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE I T +N + +VGTT++R LE+A + DG +N + G+TN F
Sbjct: 229 KHKMDSEQAEITEETCAIVNKAIDTRKNVCAVGTTTMRTLESAVSSDGHLNTFDGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + +++NFH PKSTL+M +AF G + KK Y AI Y+F +YGD L+
Sbjct: 289 IFPPYDFSIANAMITNFHHPKSTLMMQAAAFAGYDLLKKAYDVAIKEEYKFSTYGDAMLI 348
>gi|288574883|ref|ZP_06393240.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Dethiosulfovibrio peptidovorans DSM 11002]
gi|288570624|gb|EFC92181.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Dethiosulfovibrio peptidovorans DSM 11002]
Length = 344
Score = 415 bits (1068), Expect = e-114, Method: Composition-based stats.
Identities = 140/356 (39%), Positives = 198/356 (55%), Gaps = 18/356 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
V +D+ LP IA P PRDS+RLMV+ + + SDL +L S+D ++
Sbjct: 7 KVSSYDYRLPKELIAQNPADPRDSSRLMVLSREDGS---LEHRVFSDLVDYLRSDDVLIR 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L G + E E+ + R+S +W RP + +K G + D
Sbjct: 64 NDTRVMAARLKGKKVEG----EAEVEILVLSRLSGQTWEAMVRPGRRLKPG--ISVLLSD 117
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G V G + F G+++ + VGT+PLPPYI YQ
Sbjct: 118 GT---TVKVDGIRPEGLRSVTFP-EGVDVLSLLDKVGTVPLPPYITDSNAS----PEAYQ 169
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A GS AAPTAGLHFT L+ R+ G+++ VTL VG GTF PVK ED H MH
Sbjct: 170 TVFANKVGSAAAPTAGLHFTPELIERIEKKGVEILDVTLQVGLGTFRPVKEEDLRHHPMH 229
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E I + TA +N K++G RIV+VGTTS+R LE+ + G++ T++FI PG+
Sbjct: 230 RERCQISSYTADRINKAKAQGRRIVAVGTTSVRTLES-MGDSGVLLSGERDTSLFIYPGF 288
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+ VD +++NFHLP+STLLMLVSAF G E T Y+ A+S YRF+S+GD ++
Sbjct: 289 EFKIVDAMITNFHLPQSTLLMLVSAFAGRERTLNAYKEAVSMEYRFFSFGDAMFIY 344
>gi|213427838|ref|ZP_03360588.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhi str. E02-1180]
Length = 331
Score = 415 bits (1068), Expect = e-114, Method: Composition-based stats.
Identities = 133/346 (38%), Positives = 192/346 (55%), Gaps = 17/346 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLLSLEGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SIHATMTARH--GALFEVEFNDPRPVLDILNAIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLAALREKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A + +I P+ G T IFI
Sbjct: 226 HSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKSDLIEPFFGDTQIFIY 285
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHA 344
PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+
Sbjct: 286 PGYQYKVIDALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQK 331
>gi|170732044|ref|YP_001763991.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia cenocepacia MC0-3]
gi|238688590|sp|B1JVY9|QUEA_BURCC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|169815286|gb|ACA89869.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Burkholderia cenocepacia MC0-3]
Length = 355
Score = 415 bits (1068), Expect = e-114, Method: Composition-based stats.
Identities = 142/362 (39%), Positives = 200/362 (55%), Gaps = 21/362 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDF+LPP IA + R ++RL+ V ++ P + D ++LP+ + D +VF
Sbjct: 3 TLSDFDFNLPPELIAQTALPDRTASRLLEVDGSV-APARLVDRHFAELPSCIAPGDLLVF 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKV+ A+ G + +I + ++ R SK G L
Sbjct: 62 NDTKVLKARFFGQKAS-----GGKIEVLIERVTGTHTALAQIRASKSPGAGTTLRLADA- 115
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ TV ++ L F ++L I G +PLPPYI DA D YQ
Sbjct: 116 ----FDVTVGERVEPF-FTLHFPAPCLDL---IEQHGRLPLPPYIEHD--ADATDETRYQ 165
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YA G+VAAPTAGLHF LL +L ++G++ +TLHVGAGTF PV+VE+ +H MH
Sbjct: 166 TVYASNPGAVAAPTAGLHFDQPLLEKLDAMGVERATLTLHVGAGTFQPVRVENIAEHKMH 225
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI----INPWSGFTNIFI 297
SE + + + ++RGG +++VGTTS+R LE A + T+IFI
Sbjct: 226 SEWYDLPQSLVDKIAATRARGGNVIAVGTTSMRALEAAARSADEAGRPLAATQAETDIFI 285
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI YRF+SYGD LL
Sbjct: 286 TPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIRAAYRHAIEERYRFFSYGDAMLLT 345
Query: 358 QK 359
++
Sbjct: 346 RR 347
>gi|121592807|ref|YP_984703.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Acidovorax
sp. JS42]
gi|120604887|gb|ABM40627.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Acidovorax
sp. JS42]
Length = 366
Score = 415 bits (1068), Expect = e-114, Method: Composition-based stats.
Identities = 139/368 (37%), Positives = 202/368 (54%), Gaps = 23/368 (6%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDF+LP IA P R +RL+ + P +D + +LP L D +VF
Sbjct: 12 TLSDFDFELPELLIAQHPAPQRSGSRLL--DGRTAPP---TDRIFRELPDLLQPGDLLVF 66
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A++ G + ++ + ++ N + + SK G LH
Sbjct: 67 NDTRVVKARVFGEKAS-----GGKLELLIERVLTGNEVVAHMKVSKKPLPGATLHLAGGA 121
Query: 122 GQSRLEATVIDKWNTGE----ILLVFSISGIELERQISLVGTIPLPPYIARK-----RPI 172
+AT++ ++ + L + +G + G +PLPPYI R+ P
Sbjct: 122 AAGGFDATLLGRYPDADGPLFRLALRGPAGESPWELMERHGHLPLPPYIERQQAGGNDPH 181
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D YQT +A+ G+VAAPTA LHF +L+RL GI+ VTLHVGAGTF PVK
Sbjct: 182 AGEDSERYQTVFARAPGAVAAPTAALHFDDAVLARLAERGIERASVTLHVGAGTFQPVKT 241
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
E+ +H MHSE + T AL + RGGR+V+VGTT++R LE+ +G
Sbjct: 242 ENLAEHRMHSEWYEVPLATLAALERCRQRGGRVVAVGTTTVRTLESWAASG----QATGD 297
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFITPG+ F+ VD+L++NFHLPKSTL+MLVSAF G E +Y+HA++ YRF+SYGD
Sbjct: 298 TSIFITPGFSFQVVDLLLTNFHLPKSTLMMLVSAFAGYEHIMHLYRHAVAQRYRFFSYGD 357
Query: 353 TSLLFQKR 360
LL + R
Sbjct: 358 CMLLERPR 365
>gi|187477350|ref|YP_785374.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bordetella
avium 197N]
gi|115421936|emb|CAJ48456.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bordetella
avium 197N]
Length = 346
Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats.
Identities = 144/356 (40%), Positives = 203/356 (57%), Gaps = 20/356 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FD+DLPP IA P R +RL+ + + D +DL A L ND +VF
Sbjct: 5 TLSDFDYDLPPELIAQTPAAQRGGSRLLHLDAGSQ----LHDRQFADLLALLRPNDLLVF 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+VI A+L G + ++ + P+ + R SK G L
Sbjct: 61 NDTRVIKARLTGQKA-----TGGKVEVLVERITEPDRALAHVRASKSPGPGMRLELAG-- 113
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ A V+ + L +G L+ + G PLPPYI ++ D YQ
Sbjct: 114 --GAVRAEVLGRQGE---LFDLRFAGPVLD-LLEAHGATPLPPYITHS--AESEDNERYQ 165
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YA+ G+VAAPTAGLHF ++L+R+ ++G+ FVTLHVGAGTF PV+VE D+HIMH
Sbjct: 166 TVYAREPGAVAAPTAGLHFDQDMLARIEALGVARAFVTLHVGAGTFQPVRVEKIDEHIMH 225
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPG 300
+E + T QA+ ++ GGR+++VGTTS+R LE+A DG + G T +FITPG
Sbjct: 226 AEWYTVPEATVQAIARARAAGGRVIAVGTTSVRALESAAAAGDGPLAAAQGDTRLFITPG 285
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YR+R VD L++NFHLP+STLLMLVSA GIE ++ Y HA++ YRF+SYGD +
Sbjct: 286 YRYRVVDALITNFHLPQSTLLMLVSALAGIEPIRRAYAHAVAGRYRFFSYGDAMFI 341
>gi|294083598|ref|YP_003550355.1| Queuosine biosynthesis protein [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292663170|gb|ADE38271.1| Queuosine biosynthesis protein [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 386
Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats.
Identities = 168/368 (45%), Positives = 218/368 (59%), Gaps = 28/368 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLPP RIA P PRDSARL+ + I+D V DLP L + D ++
Sbjct: 17 MKLSDFDFDLPPDRIATAPAQPRDSARLLDL-----SGAAIADRHVGDLPDLLRAGDLLI 71
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS-----WSVYARPSKVIKKGDIL 115
N+T VI A+L G R + IS TLH + W V+A+P+K + DI+
Sbjct: 72 VNDTAVIPARLIGKR------GDARISVTLHKYEGHKNGGNAIWRVFAKPAKKCRPDDII 125
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVF-------SISGIELERQISLVGTIPLPPYIAR 168
F G A V+ + G++ L F ++ L + GT+PLPPYIAR
Sbjct: 126 MFAPDFG-----ARVLGRGEGGDVELAFIDPRSGNALDTDSLNAGLDTYGTMPLPPYIAR 180
Query: 169 KRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFM 228
+ D+ DYQT +A +G+VAAPTAGLHFT L S L + G+ + VTLHVGAGTF+
Sbjct: 181 PDGVLDSDHEDYQTMFASQRGAVAAPTAGLHFTDGLTSALQAKGVAIAAVTLHVGAGTFL 240
Query: 229 PVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINP 288
PV VE +H MHSE G I A A + + K GGR+++VGTTSLR+LE + G I
Sbjct: 241 PVTVETIAEHKMHSEWGAIPADVAAKIIATKQAGGRVIAVGTTSLRILEASFAALGHIGH 300
Query: 289 WSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
++G T+IFITPG+ F VD+LM+NFHLPKSTLLMLVSAF G Y HAI+ YRF+
Sbjct: 301 FAGETDIFITPGFSFNVVDMLMTNFHLPKSTLLMLVSAFAGHAPIMAAYDHAIASGYRFF 360
Query: 349 SYGDTSLL 356
SYGD LL
Sbjct: 361 SYGDACLL 368
>gi|163782315|ref|ZP_02177313.1| queuosine biosynthesis protein [Hydrogenivirga sp. 128-5-R1-1]
gi|159882348|gb|EDP75854.1| queuosine biosynthesis protein [Hydrogenivirga sp. 128-5-R1-1]
Length = 334
Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats.
Identities = 141/357 (39%), Positives = 199/357 (55%), Gaps = 23/357 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V+EFD++LP IA PV PR SARLMV+ I +LP L D +V
Sbjct: 1 MRVEEFDYELPEELIAKYPVVPRHSARLMVLDRGSQS---IKHDTFWNLPDHLEEGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L G + ++ L V P+ W K I+KG +
Sbjct: 58 FNNTKVIPARLYGRKP-----TGGKVEVVLTDYVKPDLWKALVG-GKKIRKGLSIEIAPD 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G V++ G+ L+ + G + + + G IP+PPY+ R+ + D Y
Sbjct: 112 FG-----IEVLEHIEDGKFLVR--LMGKDPLKLVDRYGHIPIPPYLRREE--EDIDREYY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +G+VA+PTA LHF+ LL +L GI FVTLHV GTF PVK + ++H++
Sbjct: 163 QTIFAEEEGAVASPTASLHFSEELLEKLERKGIGRTFVTLHVSYGTFKPVKTDSVEEHVV 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
E + T + +++ K RGGR+V+VGTT +R LET+ + G+T ++I PG
Sbjct: 223 EPEYIRVPEETVEKIHNTKERGGRVVAVGTTVVRALETS-----PFKSYEGWTELYIYPG 277
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+ VD L++NFHLP+S+LL LVSAF G E K Y+ A+S YRFYSYGD L+
Sbjct: 278 YEFKVVDALITNFHLPRSSLLFLVSAFGGKEFVLKAYREAVSKEYRFYSYGDGMLIL 334
>gi|77165122|ref|YP_343647.1| queuosine biosynthesis protein [Nitrosococcus oceani ATCC 19707]
gi|254434710|ref|ZP_05048218.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Nitrosococcus oceani AFC27]
gi|91207387|sp|Q3JAM9|QUEA_NITOC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|76883436|gb|ABA58117.1| Queuosine biosynthesis protein [Nitrosococcus oceani ATCC 19707]
gi|207091043|gb|EDZ68314.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Nitrosococcus oceani AFC27]
Length = 344
Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats.
Identities = 133/360 (36%), Positives = 194/360 (53%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F ++LP IA P R +RL+ + ++ D +LP L++ D ++
Sbjct: 1 MQLSDFTYNLPKQLIAQYPPKRRGESRLLSLEGASG---IVKDRQFIELPELLSTKDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A++ G + +I + + + + R + + G L
Sbjct: 58 FNNTKVIPARIQGTKDS-----GGKIEILIERFLDQHRALAHIRANNPPRAGRRLVMEQ- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
V K E+ + + L + + +G +PLPPYI RK D Y
Sbjct: 112 ------SVEVEVKGRVKELFELRFLDPRPLPQLLEAIGQMPLPPYIQRK--TVPVDKERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA G+VAAPTAGLHF LL RL + GI+ ++TLHVGAGTF PV+V++ H M
Sbjct: 164 QTIYASRPGAVAAPTAGLHFDKPLLKRLQAQGIRSGYITLHVGAGTFQPVRVKNITQHQM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + + GGR+V+VGTT++R LE A+ + G+I P+ G T IFI PG
Sbjct: 224 HSEYVEVSEQICAQIRDTQQAGGRVVAVGTTTVRALEAASAK-GVIAPYQGETEIFIFPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
+RF V+ L++NFHLP++TLLMLV AF G E Y+HAI YRF+SYGD + + +
Sbjct: 283 HRFHTVNALITNFHLPETTLLMLVCAFAGSEHVLAAYRHAIKKGYRFFSYGDAMFITEAK 342
>gi|107021799|ref|YP_620126.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia cenocepacia AU 1054]
gi|116688746|ref|YP_834369.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia cenocepacia HI2424]
gi|123245266|sp|Q1BZ02|QUEA_BURCA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|166216705|sp|A0K4P9|QUEA_BURCH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|105891988|gb|ABF75153.1| S-adenosylmethionine [Burkholderia cenocepacia AU 1054]
gi|116646835|gb|ABK07476.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Burkholderia cenocepacia HI2424]
Length = 355
Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats.
Identities = 142/362 (39%), Positives = 200/362 (55%), Gaps = 21/362 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDF+LPP IA + R ++RL+ V ++ P + D ++LP+ + D +VF
Sbjct: 3 TLSDFDFNLPPELIAQTALPDRTASRLLEVDGSV-APARLVDRHFAELPSCIAPGDLLVF 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKV+ A+ G + +I + ++ R SK G L
Sbjct: 62 NDTKVLKARFFGQKAS-----GGKIEVLIERVTGTHTALAQIRASKSPGAGTTLRLADA- 115
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ TV ++ L F ++L I G +PLPPYI DA D YQ
Sbjct: 116 ----FDVTVGERVEPF-FTLHFPAPCLDL---IEQHGRLPLPPYIEHD--ADATDETRYQ 165
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YA G+VAAPTAGLHF LL +L ++G++ +TLHVGAGTF PV+VE+ +H MH
Sbjct: 166 TVYASNPGAVAAPTAGLHFDQPLLDKLDAMGVERATLTLHVGAGTFQPVRVENIAEHKMH 225
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI----INPWSGFTNIFI 297
SE + + + ++RGG +++VGTTS+R LE A + T+IFI
Sbjct: 226 SEWYDLPQSLVDKIAATRARGGNVIAVGTTSMRALEAAARSADEAGRPLAATQAETDIFI 285
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI YRF+SYGD LL
Sbjct: 286 TPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIRAAYRHAIEERYRFFSYGDAMLLT 345
Query: 358 QK 359
++
Sbjct: 346 RR 347
>gi|33592191|ref|NP_879835.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bordetella
pertussis Tohama I]
gi|46576956|sp|Q7VZ81|QUEA_BORPE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|33571836|emb|CAE41349.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bordetella
pertussis Tohama I]
Length = 347
Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats.
Identities = 142/358 (39%), Positives = 202/358 (56%), Gaps = 22/358 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FD+ LPP IA P R +RL+ + + D DL L +D +V
Sbjct: 5 LTLADFDYHLPPELIAQSPAAERGGSRLLHLD----AASRLHDRRFPDLAGLLRPHDLLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + ++ + +P+ + R SK G L
Sbjct: 61 FNDTRVIKARLTGQKA-----TGGKVEVLVERITAPDRALAHVRASKSPGPGMRLRLAEA 115
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
EA V+ + GE+ + + + + G PLPPYI DA D Y
Sbjct: 116 -----FEAEVLGR--EGELFDLRFPA--PVLDLLDAHGATPLPPYITH--AADATDERRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF +L +L + G++ FVTLHVGAGTF PV+V++ +HIM
Sbjct: 165 QTVYAREPGAVAAPTAGLHFDQPMLEQLAAQGVQRAFVTLHVGAGTFQPVRVQNLAEHIM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
H+E + T A+ ++ GGRIV+VGTTS+R LE+A +DG + G T +FIT
Sbjct: 225 HAEWYTVPEATVAAIARARAHGGRIVAVGTTSVRALESAAAQAQDGPLAAAQGDTRLFIT 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGYR+RAVD L++NFHLP+STLLMLVSA G+E ++ Y HA++ YRF+SYGD +
Sbjct: 285 PGYRYRAVDALLTNFHLPQSTLLMLVSALAGVEPIRRAYAHAVAERYRFFSYGDAMFI 342
>gi|30249127|ref|NP_841197.1| queuosine biosynthesis protein [Nitrosomonas europaea ATCC 19718]
gi|46576993|sp|Q82VF1|QUEA_NITEU RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|30180446|emb|CAD85051.1| Queuosine biosynthesis protein [Nitrosomonas europaea ATCC 19718]
Length = 353
Score = 415 bits (1066), Expect = e-114, Method: Composition-based stats.
Identities = 144/357 (40%), Positives = 206/357 (57%), Gaps = 18/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ R +R++ V+ + D +LP +L D IV
Sbjct: 10 MKTDDFDFHLPDELIAQFPLANRSDSRMLYVN---GKHADLRDAAFRNLPDYLKRGDVIV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L+GV+ ++ + + + V R S + G L
Sbjct: 67 LNNTRVVKARLSGVK-----STGGKVEVMVERILDTHRARVLIRASHALVIGSTLLL--- 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
++++ A V + I + + + L + G PLPPYI R D Y
Sbjct: 119 --ENKITAQVEAREQD--IYTLCFMHSLPLIELLDQFGHTPLPPYI--GRNATVSDENRY 172
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF +L L ++G+K+ +VTLHVGAGTF PV+V++ D H+M
Sbjct: 173 QTVFAQESGAVAAPTAGLHFDETMLQTLRTLGVKIIYVTLHVGAGTFQPVRVQNIDQHVM 232
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFITP 299
H+E I T +A+ KS GG +++VGTTSLR LE+ T DG + +G TN+FITP
Sbjct: 233 HTEPYHIPTETVEAIQMCKSAGGSVLAVGTTSLRALESCMLTNDGTLVAGAGETNLFITP 292
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
G+RFR VD L++NFHLP+STLLMLVSAF G+E + Y+HAI + YRF+SYGD L+
Sbjct: 293 GFRFRIVDRLLTNFHLPRSTLLMLVSAFAGMETIRHAYRHAIDNHYRFFSYGDAMLI 349
>gi|313608657|gb|EFR84503.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL F2-208]
Length = 314
Score = 415 bits (1066), Expect = e-114, Method: Composition-based stats.
Identities = 140/329 (42%), Positives = 203/329 (61%), Gaps = 17/329 (5%)
Query: 29 MVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISC 88
MV+ I D +++ ++LN DA+V N+T+V+ A+L+G++ + I
Sbjct: 1 MVLDKESGD---IKDQHFTEIISYLNEGDALVLNDTRVLPARLHGIK----DETGAHIEV 53
Query: 89 TLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGI 148
L + N+W +P+K I+KG + F G L+AT +++ G +L FS GI
Sbjct: 54 LLLKQKEGNAWETLVKPAKRIRKGATITF----GDGALKATCLEELEHGGRILEFSYEGI 109
Query: 149 ELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRL 208
+ +G +PLPPYI + D YQT YAK GS AAPTAGLHFT +LL+++
Sbjct: 110 -FYEVLEQLGEMPLPPYIKEQLA----DQDRYQTVYAKENGSAAAPTAGLHFTKDLLAKI 164
Query: 209 ISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSV 268
+ G+++ FVTLHVG GTF PV VEDT +H MHSE + +A+ +N +K++GG++V+V
Sbjct: 165 SAKGVEIIFVTLHVGLGTFRPVDVEDTANHKMHSEFYRLTEESAERINKIKAQGGKVVAV 224
Query: 269 GTTSLRLLET-ATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAF 327
GTTS+R LET A+ DG + SG+T IFI+PGY F+AVD L++NFHLPKSTL+MLVSA
Sbjct: 225 GTTSIRTLETIASRHDGKLVAESGWTEIFISPGYTFQAVDALITNFHLPKSTLIMLVSAL 284
Query: 328 CGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ Y HA+ YRF+S+GD +
Sbjct: 285 SDRTKILAAYNHAVEEQYRFFSFGDAMFI 313
>gi|53805128|ref|YP_113199.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Methylococcus capsulatus str. Bath]
gi|81682708|sp|Q60AZ8|QUEA_METCA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|53758889|gb|AAU93180.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Methylococcus capsulatus str. Bath]
Length = 347
Score = 415 bits (1066), Expect = e-114, Method: Composition-based stats.
Identities = 141/360 (39%), Positives = 201/360 (55%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+ EF +DLP + IA P+ R ++RL+ + + D D+ L D +V
Sbjct: 1 MLKSEFHYDLPQNLIAQSPLPERSASRLLCLDGATGA---LEDKSFRDIEKLLRPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+V+ A+L G + + L + + R SK + G L
Sbjct: 58 FNDTRVLPARLFGRKE-----TGGAVEILLERLLGERLMLAHVRASKAPRPGTWLAL--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
++ V+++ G++ L+ L+ + +G +PLPPYI RP + D Y
Sbjct: 110 --EAEHRVRVVER--DGDLFLLELAGEEPLQTVLEQIGHMPLPPYIT--RPDTSADLERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA G+VAAPTAGLHF + LL RL GI + VTLHVGAGTF PV+ E+ +DH M
Sbjct: 164 QTVYATRPGAVAAPTAGLHFDTELLGRLRGAGIDMARVTLHVGAGTFQPVRTENLEDHRM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + +A+ + RGGR+V+VGTTS+R LETA + G + +SG T +FI PG
Sbjct: 224 HAEYCEVGPEVVKAVERARGRGGRVVAVGTTSMRSLETAAS-GGSLRTFSGETRLFIKPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
+RF VD L++NFHLP+STLL+LV AF G ET Y+HAI+ AYRF+SYGD +
Sbjct: 283 FRFNCVDALVTNFHLPESTLLVLVCAFAGHRETLAAYRHAIAQAYRFFSYGDAMFVTPNE 342
>gi|293611107|ref|ZP_06693406.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292826759|gb|EFF85125.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 345
Score = 415 bits (1066), Expect = e-114, Method: Composition-based stats.
Identities = 129/359 (35%), Positives = 187/359 (52%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP IA P+ R ++RL+ + DH+ +D+ D +V
Sbjct: 1 MQLSDFSFELPDELIARYPLESRSASRLLQLD----SKGQYHDHMFTDIIDLFEEGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G R I + ++ + + + S K G L
Sbjct: 57 LNDTKVMKARLKGKR-----STGGAIEILVERMLNHTTAYCHIKSSNSPKAGAELFV--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G + V + L V S L + G +P+PPY R+ + D Y
Sbjct: 109 -GADNIPVIVRGRHEN---LFVVEFSQPIL-PVLEQYGQLPIPPYFNRE--AEEIDTERY 161
Query: 181 QTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
QT + + SVAAPTA LHF LL++L ++ FVTLHVGAGTFMPV+ +D +H
Sbjct: 162 QTVFHNPEKIASVAAPTASLHFDEELLAKLEQKNVQKSFVTLHVGAGTFMPVRTDDITNH 221
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFI 297
+MHSE + T + + K+RG +++++GTT+ R LE+A G I W+G T IFI
Sbjct: 222 VMHSEWCDVPQETIDLILATKARGNKVIAIGTTATRALESAAQAHGGKIAAWTGDTQIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY F VD L++NFHLP+STLLMLVSA + Y+HA+ YRF+SYGD L+
Sbjct: 282 YPGYEFCIVDRLITNFHLPESTLLMLVSALSNRDNILAAYEHAVKSRYRFFSYGDAMLI 340
>gi|256845602|ref|ZP_05551060.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. 3_1_36A2]
gi|256719161|gb|EEU32716.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. 3_1_36A2]
Length = 348
Score = 415 bits (1066), Expect = e-114, Method: Composition-based stats.
Identities = 132/355 (37%), Positives = 196/355 (55%), Gaps = 16/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+ LP I +P PRDSA+LM+++ I ++ +L D +V N
Sbjct: 10 LSDYDYFLPEELIGQKPREPRDSAKLMLINRKTGS---IEHKNFYNIIDYLQKGDVLVRN 66
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
TKVI A++ G + + L R S ++W +P+K +K G L+
Sbjct: 67 ATKVIPARIFGHK-----DTGGVLEILLIKRTSLDTWECLLKPAKKLKLGQKLYIGENK- 120
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
L A +++ G +L F G E + +G++PLPPYI RK YQT
Sbjct: 121 --ELIAELLEIKEDGNRILKFYYEG-SFEEILDKLGSMPLPPYITRKLEN----KDRYQT 173
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ SVAAPTAGLHFT LL +++ G+ + + L VG GTF PV+ E+ +H MH
Sbjct: 174 VYAQRGESVAAPTAGLHFTEELLKKILDKGVVIVDIFLEVGLGTFRPVQTENVLEHKMHE 233
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I A+ +N K+ G RI+SVGTT+ R LE++ ++G + T IFI PGY+
Sbjct: 234 ESFEISEKAAKIINEAKTEGRRIISVGTTATRALESSVDKNGKLIAQKKDTGIFIYPGYK 293
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+ VD L++NFHLPKSTLLMLVSAF E+ ++Y A+ Y F+S+GD+ ++
Sbjct: 294 FKIVDALITNFHLPKSTLLMLVSAFYDREKMLEIYNLAVKEKYHFFSFGDSMFIY 348
>gi|46576964|sp|Q7WMM7|QUEA_BORBR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
Length = 347
Score = 414 bits (1065), Expect = e-114, Method: Composition-based stats.
Identities = 141/358 (39%), Positives = 201/358 (56%), Gaps = 22/358 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FD+ LPP IA P R +RL+ + + D DL L +D +V
Sbjct: 5 LTLADFDYHLPPELIAQSPAAERGGSRLLHLD----AASRLHDRRFPDLAGLLRPHDLLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + ++ + +P+ V+ R SK G L
Sbjct: 61 FNDTRVIKARLTGQKA-----TGGKVEVLVERITAPDRALVHVRASKSPGPGMRLRLAEA 115
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
EA V+ + GE+ + + + + G PLPPYI DA D Y
Sbjct: 116 -----FEAEVLGR--EGELFDLRFPA--PVLDLLDAHGATPLPPYITH--AADATDERRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF +L +L + G++ FVTLHVGAGTF PV+V++ +HIM
Sbjct: 165 QTVYAREPGAVAAPTAGLHFDQPMLEQLAAQGVQRAFVTLHVGAGTFQPVRVQNLAEHIM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
H+E + T A+ ++ GGRIV+VGTTS+R LE+A +DG + G T +FIT
Sbjct: 225 HAEWYTVPEATVAAIARARAHGGRIVAVGTTSVRALESAAAQAQDGPLAAAQGDTRLFIT 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGYR+R VD L++NFHLP+STLLMLVSA G+ ++ Y HA++ YRF+SYGD +
Sbjct: 285 PGYRYRIVDALLTNFHLPQSTLLMLVSALAGVAPIRRAYAHAVAERYRFFSYGDAMFI 342
>gi|126728575|ref|ZP_01744390.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Sagittula
stellata E-37]
gi|126710505|gb|EBA09556.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Sagittula
stellata E-37]
Length = 354
Score = 414 bits (1065), Expect = e-114, Method: Composition-based stats.
Identities = 161/360 (44%), Positives = 227/360 (63%), Gaps = 14/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF+LP IA RP PR +ARL+V VISD V++LP +L D +V
Sbjct: 1 MKLSDFDFELPERLIATRPARPRTAARLLVCDGG-----VISDATVAELPDWLRPGDRLV 55
Query: 61 FNNTKVITAQLNG--VRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L+G R E +I TL + WS +P K ++ G+I+ F
Sbjct: 56 LNDTQVIPARLSGVRRRVGEAGETEAQIEVTLLEPRADGCWSALLKPLKKVRDGEIVRFS 115
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
LEA ++ + + G+ +L F+++ + + ++ G +PLPPYIA +RP DA+D
Sbjct: 116 DD-----LEAMLMSRQD-GQAILRFNLAAADFDAALNAAGAMPLPPYIAARRPADAQDKE 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ +G+VAAPTA LHF +LL R+ +G+ VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVWARNRGAVAAPTASLHFDESLLKRIADMGVAFTHVTLHVGAGTFLPVKVEDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH E G + A + + ++ GGR++ VGTT+LRL+E+A E G I P+ G T+IFI
Sbjct: 230 RMHGEWGEVTPQAAAEIAATRAAGGRVIPVGTTALRLIESAARE-GEIAPFHGVTDIFIY 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ F D LM+NFHLPKSTLLMLVSA G + +++Y HA++ YRF+SYGD SLL
Sbjct: 289 PGFSFNVTDALMTNFHLPKSTLLMLVSALMGQDCIREVYAHAVAEDYRFFSYGDASLLIP 348
>gi|148244311|ref|YP_001219005.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Vesicomyosocius okutanii HA]
gi|166218755|sp|A5CXQ6|QUEA_VESOH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|146326138|dbj|BAF61281.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Vesicomyosocius okutanii HA]
Length = 340
Score = 414 bits (1065), Expect = e-114, Method: Composition-based stats.
Identities = 141/356 (39%), Positives = 207/356 (58%), Gaps = 22/356 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +K+FDFDLP S IA P+ R +RL++ I D + + F S D ++
Sbjct: 1 MQLKDFDFDLPASLIAQHPIKNRTDSRLLI------KRSSIIDIQFNQIGDFFQSGDLLI 54
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L G + ++ + + N + S+ K G + F
Sbjct: 55 MNNTKVIPARLFGTKE-----TGGKVEIMIERILDENQVLAMIKASRAPKIGSCI-FLEN 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D ++ + + G L+F L ++ +G PLPPYI KR + +D Y
Sbjct: 109 DVN-----IIVYQKDNGFYTLIFETD--SLFDLLNNIGHTPLPPYI--KRTNNVQDLSRY 159
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF +LL++L GI FVTLH+G+GTF P++ ++ +H+M
Sbjct: 160 QTVYAQKDGAVAAPTAGLHFDDSLLAQLKIQGIDHLFVTLHIGSGTFTPIRTDNIKNHVM 219
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSEI I T +N K+ GGRI++VGTT++R+LE+ + ++G + +G T+IFI P
Sbjct: 220 HSEIFEISQVTVDRINLTKANGGRIIAVGTTTVRVLES-SLKNGKLIAQNGETDIFIYPS 278
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+FR VD L++NFHLPKS+LLMLVSAF G ++ ++Y+HAI Y+F SYGD L
Sbjct: 279 YQFRIVDSLITNFHLPKSSLLMLVSAFIGRDKMLELYKHAIEQKYKFLSYGDAMFL 334
>gi|89899439|ref|YP_521910.1| S-adenosylmethionine [Rhodoferax ferrireducens T118]
gi|89344176|gb|ABD68379.1| S-adenosylmethionine [Rhodoferax ferrireducens T118]
Length = 360
Score = 414 bits (1065), Expect = e-113, Method: Composition-based stats.
Identities = 143/364 (39%), Positives = 206/364 (56%), Gaps = 21/364 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDF LPP IA P R +RL+ S D + DLP+ L D +VF
Sbjct: 13 TLSDFDFHLPPELIAQHPAPERSGSRLL-----DSTSATPQDRVFRDLPSLLQPGDLLVF 67
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+VI A+L G + ++ + + N + + R SK + G +
Sbjct: 68 NDTRVINARLFGEK-----STGGKLELLVERVLGGNQVAAHLRVSKKPEVGASVALTGAP 122
Query: 122 G-QSRLEATVIDKWNTGE----ILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
G L AT++ +W + ++ + +G + ++ G +PLPPYI A D
Sbjct: 123 GTHENLRATLLGRWPDAQGALFRFVLTNDAGDDPFTLMARHGHVPLPPYITHS--DSAED 180
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT +AK G+VAAPTA LHF LL+ L + G++ FVTLHVGAGTF PVK E+
Sbjct: 181 AARYQTVFAKNPGAVAAPTAALHFDDALLAALDARGVQRAFVTLHVGAGTFQPVKTENLA 240
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+H MHSE + T QA+ ++RGGR+++VGTT++R LE+ +G T IF
Sbjct: 241 EHQMHSEWYDVPTATQQAIADCRARGGRLIAVGTTTVRTLESWAKTG----QTTGDTQIF 296
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPG+ F+ VD+L++NFHLPKS+L+MLVSAF G E +YQHA++ YRF+SYGD LL
Sbjct: 297 ITPGFEFQLVDLLVTNFHLPKSSLMMLVSAFAGYEPVMALYQHAMAAQYRFFSYGDAMLL 356
Query: 357 FQKR 360
++R
Sbjct: 357 ARQR 360
>gi|297621197|ref|YP_003709334.1| S-adenosylmethionine tRNA ribosyltransferase [Waddlia chondrophila
WSU 86-1044]
gi|297376498|gb|ADI38328.1| S-adenosylmethionine tRNA ribosyltransferase [Waddlia chondrophila
WSU 86-1044]
Length = 341
Score = 414 bits (1065), Expect = e-113, Method: Composition-based stats.
Identities = 144/356 (40%), Positives = 192/356 (53%), Gaps = 18/356 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ + FDLP IA PV PRD +RLMV+ + I +LP FL D IVF
Sbjct: 4 KLESYQFDLPEDLIAKVPVTPRDHSRLMVIDRSSGKIEEI---PFYELPQFLGDGDRIVF 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNTKVI A+L G + ++ L + W ARP++ +KKG +
Sbjct: 61 NNTKVIPARLIGRKE-----TGGQVELLLLEEKTEGVWLTMARPARKLKKGTKVIV---- 111
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
RL A +I++ + G L+ F G+ ++ G +PLPPY+ R D YQ
Sbjct: 112 -SDRLCAEMIEELDEGMRLVRFDYEGL-FWEVLAAHGEMPLPPYLQRDELP-KLDRERYQ 168
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YAK G+VAAPTAGLHFT LL L G+ + +TLHVG GTF PV + +H MH
Sbjct: 169 TIYAKHAGAVAAPTAGLHFTKTLLEELTEKGVDIVEITLHVGLGTFRPVTAKTITEHKMH 228
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E +I A LN R + VGTT R LE+A E G + G T+IFI PGY
Sbjct: 229 EERYWITQEAASRLNRP---AKREICVGTTCCRALESAVNEQGNVFSGEGRTDIFIRPGY 285
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F+ V L++NFHLP STL+MLVSAF G + T Y+ A+ +RF+SYGD L+
Sbjct: 286 QFKKVTSLLTNFHLPGSTLMMLVSAFAGYDLTMNAYKKAVLDKFRFFSYGDAMLIL 341
>gi|221632729|ref|YP_002521950.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Thermomicrobium roseum DSM 5159]
gi|221156280|gb|ACM05407.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Thermomicrobium roseum DSM 5159]
Length = 353
Score = 414 bits (1065), Expect = e-113, Method: Composition-based stats.
Identities = 130/360 (36%), Positives = 202/360 (56%), Gaps = 20/360 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ E+D++LP IA P+ PRD+ARLMVV I + +LP+ L+ D ++ N
Sbjct: 9 LHEYDYELPEELIAQEPIEPRDAARLMVVRRAT---HSIEHRIFRELPSLLDPGDLLIVN 65
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS-WSVYARPSKVIKKGDILHFFSQD 121
+++V+ A+L G R ++ L + + W ARP++ ++ G+ + +D
Sbjct: 66 DSRVLPARLLGHRL-----TGGKVEILLVQPLEGTTVWLALARPARKLRPGETITIQPRD 120
Query: 122 GQSRLEA--TVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
Q A + ++ + G++++ + ++ G +PLPPYI R D
Sbjct: 121 PQFAQPAPLRIRERRSGGQVIVELDPG---IAERLDAFGHVPLPPYIHRP----LSDPER 173
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ GSVAAPTAGLHFT LL L GI++ +TLHVG GTF P++V D H
Sbjct: 174 YQTVYARHPGSVAAPTAGLHFTERLLDELRQRGIRIAPLTLHVGIGTFKPIEVTDVRLHK 233
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT--EDGIINPWSGFTNIFI 297
MH+E + A T + ++ RIV+VGTT+ R LE+ P +G+T+++I
Sbjct: 234 MHAEWYAVPAETVSLIRETRAANRRIVAVGTTAARTLESIADALTGDTEGPITGWTDLYI 293
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY +R VD L++NFHLP+STL++LV++F G E + Y+ A+ YRFYS+GD L+
Sbjct: 294 YPGYHWRVVDALITNFHLPRSTLILLVASFAGRELILEAYREAVQQRYRFYSFGDAMLIL 353
>gi|184159481|ref|YP_001847820.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baumannii ACICU]
gi|294842533|ref|ZP_06787216.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter sp. 6014059]
gi|238690996|sp|B2HYN4|QUEA_ACIBC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|183211075|gb|ACC58473.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Acinetobacter baumannii ACICU]
gi|322509394|gb|ADX04848.1| queA [Acinetobacter baumannii 1656-2]
gi|323519415|gb|ADX93796.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baumannii TCDC-AB0715]
Length = 345
Score = 414 bits (1064), Expect = e-113, Method: Composition-based stats.
Identities = 133/359 (37%), Positives = 189/359 (52%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP IA P+ R ++RL+ + DH+ +D+ D +V
Sbjct: 1 MQLSDFSFELPDELIARYPLETRSASRLLHLD----AKGQYHDHMFTDIIDLFEEGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G R I + ++ + + + S K G L
Sbjct: 57 LNDTKVMKARLKGKRA-----TGGAIEILVERMLNHTTAYCHIKASNSPKAGAELFV--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ + V + L V S L + G +P+PPY R+ + D Y
Sbjct: 109 -GEDNIPVIVRGRHEN---LFVVEFSQPIL-PVLEQYGQLPIPPYFNRE--AEEIDTERY 161
Query: 181 QTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
QT + + SVAAPTA LHF LL++L G+K FVTLHVGAGTFMPV+ +D +H
Sbjct: 162 QTVFHNPEKIASVAAPTASLHFDEELLAKLDQKGVKKTFVTLHVGAGTFMPVRTDDITNH 221
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFI 297
+MHSE + T + + K+RG ++++VGTT+ R LE+A G I W+G T IFI
Sbjct: 222 VMHSEWCDVPQETIDLILATKARGNKVIAVGTTATRALESAAQAHGGKIAAWTGDTQIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY F VD L++NFHLP+STLLMLVSA E Y+HA+ YRF+SYGD L+
Sbjct: 282 YPGYEFCIVDRLITNFHLPESTLLMLVSALSNRENILAAYEHAVKDRYRFFSYGDAMLI 340
>gi|163857959|ref|YP_001632257.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bordetella
petrii DSM 12804]
gi|163261687|emb|CAP43989.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bordetella
petrii]
Length = 353
Score = 414 bits (1064), Expect = e-113, Method: Composition-based stats.
Identities = 140/360 (38%), Positives = 202/360 (56%), Gaps = 25/360 (6%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FD+ LPP IA P R +RL+ + + D DL L + D +VF
Sbjct: 7 TLSDFDYALPPELIAQTPAAQRGGSRLLHLDGAGAP----HDRRFPDLAGLLRAGDLLVF 62
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+VI A+L G + ++ + P+ + R SK G L
Sbjct: 63 NDTRVIKARLTGHKAS-----GGKVEVLVERITEPDRALAHVRASKSPGPGTTLRLADA- 116
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ATV+ + GE+ + + + + G PLPPYI DA D YQ
Sbjct: 117 ----FDATVLGR--AGELFDLRFPA--PVLDLLDAHGATPLPPYITH--AADATDEARYQ 166
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YA+ G+VAAPTAGLHF +L RL ++G++ FVTLHVGAGTF PV+V++ DH+MH
Sbjct: 167 TVYAREPGAVAAPTAGLHFDEAMLERLAALGVERAFVTLHVGAGTFQPVRVDNLADHVMH 226
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-----INPWSGFTNIF 296
+E + P A+ ++RGGR+++VGTTS+R LE+A ++ + P G T +F
Sbjct: 227 AEWYTVGQPVIDAIARARTRGGRVIAVGTTSVRALESAAAQNPHGPQAPLAPLQGDTRLF 286
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYR+R VD L++NFHLP+STLLMLVSA G+E ++ Y HA++ YRF+SYGD +
Sbjct: 287 ITPGYRYRVVDALVTNFHLPQSTLLMLVSALAGMEPIRRAYAHAVAQRYRFFSYGDAMFI 346
>gi|46576961|sp|Q7WB60|QUEA_BORPA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
Length = 347
Score = 414 bits (1064), Expect = e-113, Method: Composition-based stats.
Identities = 140/358 (39%), Positives = 200/358 (55%), Gaps = 22/358 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FD+ LPP IA P R +RL+ + + D DL L +D +V
Sbjct: 5 LTLADFDYHLPPELIAQSPAAERGGSRLLHLD----AASRLHDRRFPDLAGLLRPHDLLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + ++ + +P+ + R SK G L
Sbjct: 61 FNDTRVIKARLTGQKA-----TGGKVEVLVERITAPDRALAHVRASKSPGPGMRLRLAEA 115
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
EA V+ + GE+ + + + + G PLPPYI DA D Y
Sbjct: 116 -----FEAEVLGR--EGELFDLRFPA--PVLDLLDAHGATPLPPYITH--AADATDERRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF +L +L + G++ FVTLHVGAGTF PV+V++ +HIM
Sbjct: 165 QTVYAREPGAVAAPTAGLHFDQPMLEQLAAQGVQRAFVTLHVGAGTFQPVRVQNLAEHIM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
H+E + T A+ ++ GGRIV+VGTTS+R LE+A +DG + G T +FIT
Sbjct: 225 HAEWYTVPEATVAAIARARAHGGRIVAVGTTSVRALESAAAQAQDGPLAAAQGDTRLFIT 284
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGYR+R VD L++NFHLP+STLLMLVSA G+ ++ Y HA++ YRF+SYGD +
Sbjct: 285 PGYRYRIVDALLTNFHLPQSTLLMLVSALAGVAPIRRAYAHAVAERYRFFSYGDAMFI 342
>gi|188994433|ref|YP_001928685.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas gingivalis ATCC 33277]
gi|188594113|dbj|BAG33088.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas gingivalis ATCC 33277]
Length = 350
Score = 414 bits (1064), Expect = e-113, Method: Composition-based stats.
Identities = 124/361 (34%), Positives = 184/361 (50%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP IAL P RD +R+MVVH I + D+ + + D V
Sbjct: 1 MKLSKFKFNLPEELIALEPTKFRDESRMMVVHRRTG---EIEHRVFKDILEYFDKGDTFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FNNT+V A+L G + + +I L ++ W V P++ I+ G+ L+F
Sbjct: 58 FNNTRVFPARLYGNK----EKTGAQIEVFLLRELNERLKLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
+ + L A VID + L F G E + + +G PLP YI R ++ D
Sbjct: 114 NDE---ELVAEVIDNTTSRGRTLRFLYDGSHDEFKELLFQLGQTPLPKYI--DRDVNKED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQ+ +A+++G+V AP A LHF+ L+ RL ++T+H G + + VED
Sbjct: 169 PERYQSIFAEVEGAVVAPAASLHFSRELMKRLEIKDCHFSYITVHHALGAYRDIDVEDLT 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE +I + +N +I +VGT+ LR LETA + DG + P+ G+TN F
Sbjct: 229 KHKMDSEEMYITEESCININRSWDEEKKICAVGTSILRALETAVSTDGHLKPFEGWTNRF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F L++NFH+P STLLM+ +AF G E Y A+ YRF +YGD L+
Sbjct: 289 IFPPYEFHLPSALVTNFHMPLSTLLMMTAAFGGHELIMNTYDLAVKEKYRFGAYGDAMLI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|294782568|ref|ZP_06747894.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. 1_1_41FAA]
gi|294481209|gb|EFG28984.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. 1_1_41FAA]
Length = 351
Score = 414 bits (1064), Expect = e-113, Method: Composition-based stats.
Identities = 134/355 (37%), Positives = 199/355 (56%), Gaps = 16/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+ LP I +P PRDSA+LM+++ I ++ +L D +V N
Sbjct: 13 LSDYDYFLPEELIGQKPREPRDSAKLMLINRKTG---EIEHKHFYNIIDYLQKGDVLVRN 69
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
TKVI A++ G + + L R+S ++W +P+K +K G L+
Sbjct: 70 ATKVIPARIYGYKES-----GGVLEILLIKRISIDTWECLLKPAKKLKLGQKLYIGENK- 123
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
L A +++ G +L F G E + +G++PLPPYI RK YQT
Sbjct: 124 --ELIAELLEIKEDGNRILKFYYEG-SFEEVLDKLGSMPLPPYITRKLEN----KDRYQT 176
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ SVAAPTAGLHFT LL ++ GI++ + L VG GTF PV+ E+ +H MH
Sbjct: 177 VYAQRGESVAAPTAGLHFTEELLKKISEKGIEIVDIFLEVGLGTFRPVQTENVLEHKMHE 236
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I A+A+N K++G RI+SVGTT+ R LE++ E+G + T IFI PGY+
Sbjct: 237 ESFEISEKAAKAINEAKAQGRRIISVGTTATRALESSVDENGKLIAQKKDTGIFIYPGYQ 296
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+ VD L++NFHLPKSTLLMLVSA E+ ++Y+ A+ Y F+S+GD+ ++
Sbjct: 297 FKIVDALITNFHLPKSTLLMLVSALYDREKMLEIYKLAVKEEYHFFSFGDSMFIY 351
>gi|206561641|ref|YP_002232406.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia cenocepacia J2315]
gi|238693122|sp|B4EE24|QUEA_BURCJ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|198037683|emb|CAR53626.1| putative queuosine S-adenosylmethionine:tRNA
ribosyltransferase-isomerase [Burkholderia cenocepacia
J2315]
Length = 355
Score = 414 bits (1064), Expect = e-113, Method: Composition-based stats.
Identities = 141/362 (38%), Positives = 200/362 (55%), Gaps = 21/362 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDF+LPP IA + R ++RL+ V ++ P + D ++LP+ + D +VF
Sbjct: 3 TLSDFDFNLPPELIAQTALPDRTASRLLEVDRSV-EPARLVDRHFAELPSCIAPGDLLVF 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKV+ A+ G + +I + ++ R SK G L
Sbjct: 62 NDTKVLKARFFGQKAS-----GGKIEVLIERVTGTHTALAQIRASKSPGAGTTLRLADA- 115
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ TV ++ L F ++L I G +PLPPYI DA D YQ
Sbjct: 116 ----FDVTVGERVEPF-FTLHFPAPCLDL---IEQYGRLPLPPYIEHD--PDATDETRYQ 165
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YA G+VAAPTAGLHF LL +L ++G++ +TLHVGAGTF PV+V++ +H MH
Sbjct: 166 TVYASNPGAVAAPTAGLHFDQPLLEQLDALGVERATLTLHVGAGTFQPVRVDNIAEHKMH 225
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI----INPWSGFTNIFI 297
SE + + + ++RGG +++VGTTS+R LE A + T+IFI
Sbjct: 226 SEWYDLPQSLVDKIAATRARGGNVIAVGTTSMRALEAAARSADEAGRPLAATQAETDIFI 285
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI YRF+SYGD LL
Sbjct: 286 TPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIRAAYRHAIEERYRFFSYGDAMLLT 345
Query: 358 QK 359
++
Sbjct: 346 RR 347
>gi|260548786|ref|ZP_05823008.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter sp. RUH2624]
gi|260407954|gb|EEX01425.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter sp. RUH2624]
Length = 345
Score = 414 bits (1064), Expect = e-113, Method: Composition-based stats.
Identities = 132/359 (36%), Positives = 188/359 (52%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP IA P+ R ++RL+ + DH+ +D+ D +V
Sbjct: 1 MQLSDFSFELPDELIARYPLESRSASRLLHLD----AKGQYHDHMFTDIIDLFEEGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G R I + ++ + + + S K G L
Sbjct: 57 LNDTKVMKARLKGKRA-----TGGAIEILVERMLNHTTAYCHIKSSNSPKAGAELFV--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G + V + L V S L + G +P+PPY R+ + D Y
Sbjct: 109 -GADNIPVIVRGRHEN---LFVVEFSQPIL-PVLEQYGQLPIPPYFNRE--AEEIDTERY 161
Query: 181 QTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
QT + + SVAAPTA LHF LL++L G+K FVTLHVGAGTFMPV+ +D +H
Sbjct: 162 QTVFHNPEKIASVAAPTASLHFDEELLAKLDQKGVKKTFVTLHVGAGTFMPVRTDDITNH 221
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFI 297
+MHSE + T + + K+RG ++++VGTT+ R LE+A G I W+G T IFI
Sbjct: 222 VMHSEWCDVPQETIDLILATKARGNKVIAVGTTATRALESAAQAHGGKIAAWTGDTQIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY F VD L++NFHLP+STLLMLVSA + Y+HA+ YRF+SYGD L+
Sbjct: 282 YPGYEFCIVDRLITNFHLPESTLLMLVSALSNRDNILAAYEHAVKDRYRFFSYGDAMLI 340
>gi|289548841|ref|YP_003473829.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Thermocrinis albus DSM 14484]
gi|289182458|gb|ADC89702.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Thermocrinis albus DSM 14484]
Length = 341
Score = 413 bits (1063), Expect = e-113, Method: Composition-based stats.
Identities = 135/357 (37%), Positives = 193/357 (54%), Gaps = 23/357 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +EFD+ LP IA PV PR +ARLMV++ I + +LP +L D ++
Sbjct: 8 MRTEEFDYYLPKELIAKYPVEPRHAARLMVINRKDGS---IKHDIFWNLPLYLQEGDLVI 64
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV+ A+L G + + L V + W K I++G ++
Sbjct: 65 FNNSKVLPARLFGHKP-----TGGRVEILLTDYVDKHVWRALIG-GKNIREGMVIEVGED 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L+ V G+ + S R + G IP+PPY+ +R + D V Y
Sbjct: 119 -----LKVEVRRHLEGGKFEVFLISSDPA--RALDRYGHIPIPPYL--EREDEPIDRVYY 169
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +GSVAAPTA LHF+ LL RL GIK F+TLHV GTF PVKV + ++H +
Sbjct: 170 QTVFAQEEGSVAAPTASLHFSQELLDRLEEFGIKKAFITLHVSYGTFKPVKVSEVEEHRV 229
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
E + T + + K +G R+V+VGTT +R LETA P+ G+T+++I PG
Sbjct: 230 DPEYIKVPQETIELIKRTKEKGKRVVAVGTTVVRALETAVD-----KPYEGWTDLYIYPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ VD L++NFHLP+S+LL LV AF G + Y A+ YRFYSYGD L+
Sbjct: 285 YQFKVVDALVTNFHLPRSSLLFLVCAFGGKDLIMHAYNVAVKERYRFYSYGDGMLIL 341
>gi|33600349|ref|NP_887909.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bordetella
bronchiseptica RB50]
gi|33567948|emb|CAE31861.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bordetella
bronchiseptica RB50]
Length = 357
Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats.
Identities = 141/358 (39%), Positives = 201/358 (56%), Gaps = 22/358 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FD+ LPP IA P R +RL+ + + D DL L +D +V
Sbjct: 15 LTLADFDYHLPPELIAQSPAAERGGSRLLHLD----AASRLHDRRFPDLAGLLRPHDLLV 70
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + ++ + +P+ V+ R SK G L
Sbjct: 71 FNDTRVIKARLTGQKA-----TGGKVEVLVERITAPDRALVHVRASKSPGPGMRLRLAEA 125
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
EA V+ + GE+ + + + + G PLPPYI DA D Y
Sbjct: 126 -----FEAEVLGR--EGELFDLRFPA--PVLDLLDAHGATPLPPYITH--AADATDERRY 174
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF +L +L + G++ FVTLHVGAGTF PV+V++ +HIM
Sbjct: 175 QTVYAREPGAVAAPTAGLHFDQPMLEQLAAQGVQRAFVTLHVGAGTFQPVRVQNLAEHIM 234
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
H+E + T A+ ++ GGRIV+VGTTS+R LE+A +DG + G T +FIT
Sbjct: 235 HAEWYTVPEATVAAIARARAHGGRIVAVGTTSVRALESAAAQAQDGPLAAAQGDTRLFIT 294
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGYR+R VD L++NFHLP+STLLMLVSA G+ ++ Y HA++ YRF+SYGD +
Sbjct: 295 PGYRYRIVDALLTNFHLPQSTLLMLVSALAGVAPIRRAYAHAVAERYRFFSYGDAMFI 352
>gi|258545497|ref|ZP_05705731.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Cardiobacterium hominis ATCC 15826]
gi|258519197|gb|EEV88056.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Cardiobacterium hominis ATCC 15826]
Length = 345
Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats.
Identities = 147/355 (41%), Positives = 203/355 (57%), Gaps = 18/355 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+F ++LP IA P+ R +ARL++ + ++D +V DLP L +D +VF
Sbjct: 3 RKSDFMYELPDELIARFPLAERSAARLLLARAVSVDEVALADRMVRDLPDLLEPDDLLVF 62
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNT+V+ A+L G + + L S + + Y R SK K G ++ S
Sbjct: 63 NNTRVLPARLFGQKES-----GGRVEILLERLKSAHEANAYVRASKSPKVGGVIRIGSA- 116
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
E V + L S ++ G +P+PPY+ +R D YQ
Sbjct: 117 -----ELRVTGRHEA----LFALYSETPWAELLAAQGEMPIPPYL--ERAALESDKQRYQ 165
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +AK G+VAAPTAGLHF LL+ + G+K+ VTLHVGAGTF PV+ E+ +HIMH
Sbjct: 166 TVFAKHSGAVAAPTAGLHFDEALLAAIRLRGVKMAEVTLHVGAGTFQPVRHENLAEHIMH 225
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E + A+ + ++RGGR+V++GTTSLR LE+A E G + P+SG TN+FITPGY
Sbjct: 226 EEWLQVGQDVVDAVAACRARGGRVVAIGTTSLRALESAA-EGGELAPFSGDTNLFITPGY 284
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
RFR VD L++NFHLP+STLLMLVSAF G + YQHAI+ YRF+SYGD L
Sbjct: 285 RFRVVDALLTNFHLPESTLLMLVSAFAGYANIRAAYQHAIAARYRFFSYGDAMFL 339
>gi|239501681|ref|ZP_04660991.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baumannii AB900]
gi|238685530|sp|A3M8S1|QUEA_ACIBT RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|193078344|gb|ABO13315.2| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baumannii ATCC 17978]
Length = 345
Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats.
Identities = 133/359 (37%), Positives = 188/359 (52%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP IA P+ R ++RL+ + DH+ +D+ D +V
Sbjct: 1 MQLSDFSFELPDELIARYPLETRSASRLLHLD----AKGQYHDHMFTDIIDLFEEGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G R I + ++ + + + S K G L
Sbjct: 57 LNDTKVMKARLKGKRA-----TGGAIEILVERMLNHTTAYCHIKASNSPKAGAELFV--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G + V + L V S L + G +P+PPY R+ + D Y
Sbjct: 109 -GADNIPVIVRGRHEN---LFVVEFSQPIL-PVLEQYGQLPIPPYFNRE--AEEIDTERY 161
Query: 181 QTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
QT + + SVAAPTA LHF LL++L G+K FVTLHVGAGTFMPV+ +D +H
Sbjct: 162 QTVFHNPEKIASVAAPTASLHFDEELLAKLDQKGVKKTFVTLHVGAGTFMPVRTDDITNH 221
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFI 297
+MHSE + T + + K+RG ++++VGTT+ R LE+A G I W+G T IFI
Sbjct: 222 VMHSEWCDVPQETIDLILATKARGNKVIAVGTTATRALESAAQAHGGKIAAWTGDTQIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY F VD L++NFHLP+STLLMLVSA E Y+HA+ YRF+SYGD L+
Sbjct: 282 YPGYEFCIVDRLITNFHLPESTLLMLVSALSNRENILAAYEHAVKDRYRFFSYGDAMLI 340
>gi|260557115|ref|ZP_05829331.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baumannii ATCC 19606]
gi|260409221|gb|EEX02523.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baumannii ATCC 19606]
Length = 345
Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats.
Identities = 134/359 (37%), Positives = 189/359 (52%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP IA P+ R ++RL+ + DH+ +D+ D +V
Sbjct: 1 MQLSDFSFELPDELIARYPLETRSASRLLHLD----AKGQYHDHMFTDIIDLFEEGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G R I + ++ + + + S K G L
Sbjct: 57 LNDTKVMKARLKGKRA-----TGGAIEILVERMLNHTTAYCHIKASNSPKAGAELFV--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G + V + L V S L + G +P+PPY R+ +A D Y
Sbjct: 109 -GADNIPVIVRGRHEN---LFVVEFSQPIL-PVLEQYGQLPIPPYFNRE--AEAIDTERY 161
Query: 181 QTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
QT + + SVAAPTA LHF LL++L G+K FVTLHVGAGTFMPV+ +D +H
Sbjct: 162 QTVFHNPEKIASVAAPTASLHFDEELLAKLDQKGVKKTFVTLHVGAGTFMPVRTDDITNH 221
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFI 297
+MHSE + T + + K+RG ++++VGTT+ R LE+A G I W+G T IFI
Sbjct: 222 VMHSEWCDVPQETIDLILATKARGNKVIAVGTTATRALESAAQAHGGKIAAWTGDTQIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY F VD L++NFHLP+STLLMLVSA E Y+HA+ YRF+SYGD L+
Sbjct: 282 YPGYEFCIVDRLITNFHLPESTLLMLVSALSNRENILAAYEHAVKDRYRFFSYGDAMLI 340
>gi|255321125|ref|ZP_05362291.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter radioresistens SK82]
gi|255301679|gb|EET80930.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter radioresistens SK82]
Length = 346
Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats.
Identities = 132/359 (36%), Positives = 192/359 (53%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP IA P+ R ++RL+ ++ SD +D+ D +V
Sbjct: 1 MQLSDFSFNLPDELIARYPLAQRSASRLLHLN----SEGQYSDRHFTDILELFEPGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G R + + + + S K G L
Sbjct: 57 LNDTKVMKARLKGRRA-----TGGAVEILVERIFDQTIAHCHIKASNSPKAGAELFI--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++ TV + L V S L + + G +P+PPY R+ +A D Y
Sbjct: 109 -GADEVKVTVQGRHEN---LFVVEFSQPIL-QVLDQYGQLPIPPYFNRE--AEAIDSERY 161
Query: 181 QTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
QT + + SVAAPTA LHF LL++L G++ FVTLHVGAGTF+PV+ D ++H
Sbjct: 162 QTVFHDPEKIASVAAPTASLHFDEVLLNKLSEKGVQQAFVTLHVGAGTFLPVRSIDIENH 221
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFI 297
IMHSE + T + + V++RG ++++VGTT+ R LE+A +G I W+G T IFI
Sbjct: 222 IMHSEWCEVPENTVELIKQVQARGNKVIAVGTTATRALESAAQAHNGKIEAWTGDTQIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+F VD L++NFHLP+STLLMLVSA + Y+HA+ YRF+SYGD L+
Sbjct: 282 YPGYQFCVVDRLITNFHLPESTLLMLVSALSTRDYILAAYEHAVREHYRFFSYGDAMLI 340
>gi|114570417|ref|YP_757097.1| queuosine biosynthesis protein [Maricaulis maris MCS10]
gi|122315730|sp|Q0ANH8|QUEA_MARMM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|114340879|gb|ABI66159.1| Queuosine biosynthesis protein [Maricaulis maris MCS10]
Length = 353
Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats.
Identities = 171/361 (47%), Positives = 233/361 (64%), Gaps = 11/361 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDF LP +RIALRP PRD+AR++ V + V +D V DLP L D +V
Sbjct: 1 MRVSDFDFHLPEARIALRPARPRDAARMLHV----ASNGVFADRGVRDLPDLLQPGDLMV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREK--EISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
FN+T+VI A L G+R E+ LH R+ ++W + RP+K ++ GD + F
Sbjct: 57 FNDTRVIPAALKGIRPARAVGGGGPVEVEVNLHKRIDASAWRAFVRPAKRLRMGDEIAFG 116
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
L+A V K G++ LVF+ +G L+ I++ G +PLPPYIARKR +D +D
Sbjct: 117 E-----TLKAEVTGKSEGGDVRLVFNAAGAALDAAIAVAGEMPLPPYIARKRGVDEKDEA 171
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A +GSVAAPTAGLHFT L++ L + G++ VTLHVGAGTF+PVK +DTDDH
Sbjct: 172 DYQTLFATHEGSVAAPTAGLHFTPELMAALEARGVEQTRVTLHVGAGTFLPVKSDDTDDH 231
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE + A A A+N+ K+ G R++ VGTT+LR +E+ + GI+ S T+IF+T
Sbjct: 232 QMHSEWCTVSAEAADAINAAKAEGRRVIPVGTTALRTIESLASGPGIVRAGSRDTDIFLT 291
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG F D+LM+NFHLPKSTL MLVSA G++ ++ Y HAI+ YRFYSYGD LL +
Sbjct: 292 PGSDFAITDMLMTNFHLPKSTLFMLVSALSGLDVMQRAYAHAIAAEYRFYSYGDACLLER 351
Query: 359 K 359
+
Sbjct: 352 R 352
>gi|146277887|ref|YP_001168046.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhodobacter
sphaeroides ATCC 17025]
gi|166216745|sp|A4WTM7|QUEA_RHOS5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|145556128|gb|ABP70741.1| Queuosine biosynthesis protein [Rhodobacter sphaeroides ATCC 17025]
Length = 346
Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats.
Identities = 162/358 (45%), Positives = 213/358 (59%), Gaps = 14/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RP PR +ARL++ + I D V DL + D +V
Sbjct: 1 MKLSDFDFDLPERLIATRPARPRTAARLLLAEGDR-----IEDRHVRDLVGIFHPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G R +I TL + W A+P + +K+G+ + F
Sbjct: 56 LNNTRVIPARLVGTRTRG--EACAKIEITLMEPAAAGGWRALAKPLRKLKEGETIRFSDA 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A V +K T L+ +G + + ++ G +PLPPYIA +R DA+D DY
Sbjct: 114 -----LSAEVAEKGETDLRLVF-DRAGEDFDAALAEAGAMPLPPYIAARRAPDAQDREDY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTA LHF LL L + G+ VTLHVGAGTF+PVKVED H M
Sbjct: 168 QTVFARHAGAVAAPTASLHFDRPLLEALAANGVAFTEVTLHVGAGTFLPVKVEDVTTHRM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G + A + + K+ GGR++ VGTT+LRL+E+A+ G I PW G T+IFI PG
Sbjct: 228 HAEWGEVTEAAAAEIAATKAAGGRVIPVGTTALRLIESASAA-GTIRPWRGETDIFIYPG 286
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRFR D LM+NFHLPKSTLLMLVSA G + +Y HA+ H YRF+SYGD SLL
Sbjct: 287 YRFRVTDALMTNFHLPKSTLLMLVSALMGEARIRAIYDHAVRHDYRFFSYGDASLLIP 344
>gi|33595821|ref|NP_883464.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bordetella
parapertussis 12822]
gi|33565900|emb|CAE36448.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bordetella
parapertussis]
Length = 357
Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats.
Identities = 140/358 (39%), Positives = 200/358 (55%), Gaps = 22/358 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FD+ LPP IA P R +RL+ + + D DL L +D +V
Sbjct: 15 LTLADFDYHLPPELIAQSPAAERGGSRLLHLD----AASRLHDRRFPDLAGLLRPHDLLV 70
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + ++ + +P+ + R SK G L
Sbjct: 71 FNDTRVIKARLTGQKA-----TGGKVEVLVERITAPDRALAHVRASKSPGPGMRLRLAEA 125
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
EA V+ + GE+ + + + + G PLPPYI DA D Y
Sbjct: 126 -----FEAEVLGR--EGELFDLRFPA--PVLDLLDAHGATPLPPYITH--AADATDERRY 174
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF +L +L + G++ FVTLHVGAGTF PV+V++ +HIM
Sbjct: 175 QTVYAREPGAVAAPTAGLHFDQPMLEQLAAQGVQRAFVTLHVGAGTFQPVRVQNLAEHIM 234
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFIT 298
H+E + T A+ ++ GGRIV+VGTTS+R LE+A +DG + G T +FIT
Sbjct: 235 HAEWYTVPEATVAAIARARAHGGRIVAVGTTSVRALESAAAQAQDGPLAAAQGDTRLFIT 294
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGYR+R VD L++NFHLP+STLLMLVSA G+ ++ Y HA++ YRF+SYGD +
Sbjct: 295 PGYRYRIVDALLTNFHLPQSTLLMLVSALAGVAPIRRAYAHAVAERYRFFSYGDAMFI 352
>gi|282900339|ref|ZP_06308290.1| Queuosine biosynthesis protein [Cylindrospermopsis raciborskii
CS-505]
gi|281194844|gb|EFA69790.1| Queuosine biosynthesis protein [Cylindrospermopsis raciborskii
CS-505]
Length = 369
Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats.
Identities = 150/366 (40%), Positives = 208/366 (56%), Gaps = 19/366 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVH-PNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +D++LPP IA PV PRDS+RLMV++ PN DH+ DLP L D +V
Sbjct: 8 LSGYDYELPPELIAQNPVVPRDSSRLMVINSPNTGTSTPPLDHIFRDLPELLKPGDLLVM 67
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNT+VI A+L G + + L N W +P K G + F Q
Sbjct: 68 NNTRVIPARLYGRK-----STGARVEVLLLEEKQHNCWLALVKPGKYFNVGTEIIFDDQG 122
Query: 122 GQS------RLEATVIDKWN-TGEILLVFSIS-GIELERQISLVGTIPLPPYIARKRPID 173
S + A VI++ TG LL F + + L + +G +PLPPYI ++
Sbjct: 123 LSSADKLIPQFTARVIERDENTGGRLLQFDLPINVSLLHLLHKLGEVPLPPYINNSHALE 182
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
+ YQT YAK G+VAAPTAGLHFT LL +L GI+ F+TLHVG GTF PV+VE
Sbjct: 183 EQ----YQTVYAKHDGAVAAPTAGLHFTPELLVKLRERGIEQEFLTLHVGVGTFRPVEVE 238
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
D H MH E + + + S K+ GGRI++VGTT +R LE + + G + P++G
Sbjct: 239 DVTTHQMHEEWIEVSGDLVEKIYSTKNAGGRIIAVGTTVVRALEG-SAQTGSLQPYTGKV 297
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
N+FI PGY++R V+ L++NFHLP+S+LLMLVS+ G E +Y+ AI+ YRFYS+GD
Sbjct: 298 NLFIYPGYQWRVVEGLITNFHLPRSSLLMLVSSLIGRERLLGIYKQAIASRYRFYSFGDA 357
Query: 354 SLLFQK 359
L+ +
Sbjct: 358 MLILPE 363
>gi|124268920|ref|YP_001022924.1| putative queuosine S-adenosylmethionine:tRNA
ribosyltransferase-isomerase [Methylibium petroleiphilum
PM1]
gi|124261695|gb|ABM96689.1| putative queuosine S-adenosylmethionine:tRNA
ribosyltransferase-isomerase [Methylibium petroleiphilum
PM1]
Length = 355
Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats.
Identities = 143/361 (39%), Positives = 200/361 (55%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ V +FDF LPP IA P R +RL+ D +LP+ L+ D +V
Sbjct: 9 LTVADFDFALPPELIAQHPAPERSGSRLL-----DGRGDAPLDRRFRELPSLLSPGDLLV 63
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP-NSWSVYARPSKVIKKGDILHFFS 119
FN+T+VI A+L G + + + + + + R SK + G +HF
Sbjct: 64 FNDTRVIKARLYGRKASGGG-----VEALVERVLPGTHEVWAHLRASKSPRPGSRVHFAG 118
Query: 120 QDGQS-RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+DG S +A V+ + L + G + G +PLPPYI DA D
Sbjct: 119 RDGGSTAFDAEVLGRCGPDGSLFHLRLPGDPF-ALLERHGHVPLPPYIEHG--DDADDER 175
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT +A+ G+VAAPTA LHF + +L+ L + G+ VTLHVGAGTF PV+VE +H
Sbjct: 176 RYQTVFARAPGAVAAPTAALHFDAEVLAALEAQGVARASVTLHVGAGTFQPVRVEQLAEH 235
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MHSE + T A+ ++ GGR+V+VGTT+LR LE+A G + + T+IFIT
Sbjct: 236 RMHSEWFELPGATVDAIARTRAAGGRVVAVGTTTLRALESAAL-GGELQAGARETDIFIT 294
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ FR VD L++NFHLP+STL+MLVSAF G E + +Y HAI YRF+SYGD LL +
Sbjct: 295 PGFTFRVVDRLLTNFHLPRSTLMMLVSAFAGHERIRTLYTHAIRERYRFFSYGDAMLLQR 354
Query: 359 K 359
+
Sbjct: 355 R 355
>gi|91200075|emb|CAJ73118.1| strongly similar to S-adenosylmethionine-tRNA
ribosyltransferase-isomerase [Candidatus Kuenenia
stuttgartiensis]
Length = 367
Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats.
Identities = 128/359 (35%), Positives = 199/359 (55%), Gaps = 17/359 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ ++DFDLP IA +P RD+ARL+V++ I S++ +L D +V
Sbjct: 23 KLSDYDFDLPKELIAQKPTEKRDNARLLVLYRRSG---RIEHRRFSEIAGYLRPEDLLVL 79
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNTKVI +++ G + + + + N W + + ++KKG+ ++
Sbjct: 80 NNTKVIPSRIAGKKP-----QGAYVDLLFIEELEDNHWKALLKSNGLLKKGEKIYL---- 130
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKR---PIDARDYV 178
+ + A ++ K +L +G + I G +PLPPYI R + + D
Sbjct: 131 DNAAVSACLLVKHEDNSWILRIE-NGANIRELIHRTGEMPLPPYIKRPKKNNTLSTLDAE 189
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT +A+ +G++AAPTAGLHF+ ++L ++ + G + FVTLHV GTF+P+K E+ +H
Sbjct: 190 RYQTVFAQKEGAIAAPTAGLHFSEDVLGKIRNSGTDIAFVTLHVRLGTFLPIKTEEIKNH 249
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH E + K+RGGRI++ G+TS R LET + I+ +SG+T++FI
Sbjct: 250 RMHKEYYEYTKELLPKITITKNRGGRIIATGSTSCRTLETIALNNN-IHQFSGYTDLFIY 308
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
P Y F+ VD L++NFHLPK+TL +LVSAF G E+ Y+ A YRFYSYGD L+
Sbjct: 309 PPYPFQYVDALITNFHLPKTTLFLLVSAFAGREQIFNAYEIAKKEGYRFYSYGDCMLII 367
>gi|301063410|ref|ZP_07203946.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [delta
proteobacterium NaphS2]
gi|300442483|gb|EFK06712.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [delta
proteobacterium NaphS2]
Length = 352
Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats.
Identities = 133/363 (36%), Positives = 202/363 (55%), Gaps = 20/363 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++++++ LP + IA PV RD +RL++V ++D DLP+FL D +V
Sbjct: 3 KIEDYNYHLPEALIAQFPVDKRDHSRLLLVDRPTGS---LADRRFFDLPSFLGPGDLLVV 59
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVS-----PNSWSVYARPSKVIKKGDILH 116
NNT+V+ A++ G + ++ + + S + S+ K G +
Sbjct: 60 NNTRVVPARVFGQKES-----GGKVEVLVLEHPNGADCREESRLCLLKSSRRPKPGSRIF 114
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI--DA 174
F + + + + ++ G + F + ++ G +PLPPYI R + D
Sbjct: 115 F-----EGSVTGEIEEIFDRGLTRISFKADEKSMAEFLAENGILPLPPYIKRSKDASLDM 169
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D YQT YA+ G+VAAPTAGLHFT +L++ L + G+K +TLHVG GTF PV+ ED
Sbjct: 170 LDKERYQTVYAERAGAVAAPTAGLHFTEDLITALRAKGVKTAPLTLHVGYGTFKPVETED 229
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
+H + E I+ TA+ +N ++ GGR+ +VGTT +R LETA TE+ + +G T
Sbjct: 230 IREHRLGEEQFVIEPHTAKLINETRADGGRVFAVGTTVVRTLETAWTEEKGVCAGAGKTG 289
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
+ ITPG++F VD L++NFHLP+S+LL LVSAF G TKK Y A+ YRFYSYGD
Sbjct: 290 LMITPGFQFHVVDGLITNFHLPRSSLLFLVSAFAGFALTKKAYAWAVGQQYRFYSYGDAM 349
Query: 355 LLF 357
L+
Sbjct: 350 LIL 352
>gi|94497297|ref|ZP_01303868.1| Queuosine biosynthesis protein [Sphingomonas sp. SKA58]
gi|94423160|gb|EAT08190.1| Queuosine biosynthesis protein [Sphingomonas sp. SKA58]
Length = 344
Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats.
Identities = 183/360 (50%), Positives = 233/360 (64%), Gaps = 16/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLPP IALRP PRDSARL+ + P I D V DLP+ L + D +V
Sbjct: 1 MRVDLFDFDLPPDNIALRPASPRDSARLL----AAAGPSGIEDRTVRDLPSLLRAGDMLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI AQL G R E I TLH R+ W + R +K +++GD + F +
Sbjct: 57 FNDTRVIPAQLEGRR------GEARIGATLHKRIGLRQWQAFLRNAKRVREGDRIEFGAG 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ A + G + L F +E + GT+PLPPYIA KRP D +D DY
Sbjct: 111 -----VTAIAGARDEDGGVTLEFEGD-EPVEILLERAGTMPLPPYIASKRPTDEQDRSDY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTA LHFT L+ + + G+ +TLHVGAGTF+PVK +DTDDH M
Sbjct: 165 QTMFAREDGAVAAPTAALHFTPELMDAIAAAGVLTQTLTLHVGAGTFLPVKAQDTDDHRM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G IDA A LN+ ++ GGR+++VGTTSLRLLE+A EDG+I P++ T IFITPG
Sbjct: 225 HAEWGRIDAAAADRLNAARAAGGRLIAVGTTSLRLLESAAGEDGVIRPFADETRIFITPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YRFRAVD LM+NFHLPKSTL MLVSA G E + +Y HAI+ YRFYSYGD+SLL ++
Sbjct: 285 YRFRAVDGLMTNFHLPKSTLFMLVSALMGRERMQAIYAHAIAQGYRFYSYGDSSLLLPEK 344
>gi|312129239|ref|YP_003996579.1| s-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Leadbetterella byssophila DSM 17132]
gi|311905785|gb|ADQ16226.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Leadbetterella byssophila DSM 17132]
Length = 350
Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats.
Identities = 125/362 (34%), Positives = 188/362 (51%), Gaps = 17/362 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F FDLP S IA P RD AR+MV+H I D+ + D +V
Sbjct: 1 MKLSSFKFDLPDSLIAQHPYEDRDGARMMVLHRKTGK---IEHKQFRDIIEYFGDGDVMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
N+TKV A+L G + + +I L ++ W V P++ I+ G+ L+F
Sbjct: 58 ANDTKVFPARLYGSK----EKTGAKIEVFLLRELNREMRLWDVLVDPARKIRVGNKLYF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
G S L A VID + + F G E+ + I +G P+P I +R + D
Sbjct: 113 ---GDSDLVAEVIDNTTSRGRTIRFLFDGNHEEMMQAIYELGETPIPKDIL-QREVADYD 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+QT +AK +G+VAAP AG+HFT N++ R+ G+ +TLH+G GTF V+VED
Sbjct: 169 EERFQTIFAKNEGAVAAPIAGIHFTKNIVRRMEINGVDFAPLTLHIGIGTFRQVEVEDLT 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWS-GFTNI 295
H SE FI T +N R+ ++G+TSLR +E++ + + + P +T+
Sbjct: 229 KHKTDSENFFIPEATCNIVNRALDENKRVCAIGSTSLRAMESSVSANNRLKPLDNAWTDK 288
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI P + F+ + L++NFHLP+S LLM AF G + + YQ AI Y+F++YGD L
Sbjct: 289 FIFPPFDFKIANALLTNFHLPESILLMTTCAFGGYDTVMEAYQVAIKEKYKFFTYGDAML 348
Query: 356 LF 357
+
Sbjct: 349 II 350
>gi|114566953|ref|YP_754107.1| S-adenosylmethionine tRNA ribosyltransferase [Syntrophomonas wolfei
subsp. wolfei str. Goettingen]
gi|122318043|sp|Q0AX18|QUEA_SYNWW RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|114337888|gb|ABI68736.1| S-adenosylmethionine tRNA ribosyltransferase [Syntrophomonas wolfei
subsp. wolfei str. Goettingen]
Length = 352
Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats.
Identities = 133/356 (37%), Positives = 189/356 (53%), Gaps = 14/356 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ + +DLPP IA P RDS+RL+V+ ++D D+ +L DA+V
Sbjct: 11 RLSTYYYDLPPELIAQYPAEYRDSSRLLVLDRKSGD---LNDRAFKDISLYLKKGDALVL 67
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N T+VI A+ + + L ++ + W +P++ +K G +
Sbjct: 68 NETRVIPARFFAYKES-----GARVEILLLKKLGDD-WEALVKPARRLKAGSRVFLSPDK 121
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
L ++++ + V ++ + + G IPLPPYI RP + D YQ
Sbjct: 122 ---PLVIEIVEELDFAGGRRVRFQDSVDEDTLLQEQGHIPLPPYIN--RPDEELDRERYQ 176
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YA GSVAAPTAGLHFT +LL + GI + + LHVG GTF PVK ED H MH
Sbjct: 177 TVYACKSGSVAAPTAGLHFTPDLLKEITLQGINIVRIVLHVGMGTFRPVKNEDIRQHNMH 236
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E + A LN + GG+IV+VGTT +R LE+ +D G TN +I PGY
Sbjct: 237 LEYYEVAEDAAALLNLTRESGGQIVAVGTTVVRTLESVYNKDCGFLAGKGETNKYIFPGY 296
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+FRA+D L++NFHLP S+LLMLV+ F G E T Y+HA+ + YRF+SYGD L+
Sbjct: 297 QFRAIDKLLTNFHLPGSSLLMLVAGFAGTESTLAAYRHAVENRYRFFSYGDAMLVI 352
>gi|229496076|ref|ZP_04389798.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas endodontalis ATCC 35406]
gi|229316972|gb|EEN82883.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas endodontalis ATCC 35406]
Length = 349
Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats.
Identities = 130/361 (36%), Positives = 181/361 (50%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EF FDLP IA PV RD +RLM++H I + D+ + D V
Sbjct: 1 MKLSEFGFDLPQELIASHPVEHRDESRLMILHRKDGS---IEHGIFKDILKYFGKGDTFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FNNTKVI A+L G + + +I L ++P W V P++ I+ G+ L+F
Sbjct: 58 FNNTKVIPARLYGKK----EKTNAKIEVFLLRELNPQIKLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
DG L A VID G L F G E + + +G PLP Y+ R D
Sbjct: 114 PDDG---LMAEVIDNTINGGRTLRFLYDGSHEEFKSYLYALGEAPLPKYMERD--ATEED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+QT YA +G+V AP AGLHF+ LL RL ++ ++TLH G G F +ED
Sbjct: 169 LERFQTIYASEEGAVIAPAAGLHFSRELLKRLEIADCRLAYLTLHNGLGNFENQDIEDLS 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H ++E FI + + G IV+VGT+ LR LETA + DG + + G+TN +
Sbjct: 229 KHKKNNEQMFIGPECCEITRKARDEGKHIVAVGTSVLRALETAVSTDGYVKEFDGWTNKY 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y V L++NFH+P+S LLM +A G + Y+ A YRF +YGD L+
Sbjct: 289 IYPPYPIEFVTSLITNFHMPQSLLLMNAAAVAGYQNIMNAYEVAKQEKYRFGAYGDAMLI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|262281067|ref|ZP_06058849.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter calcoaceticus RUH2202]
gi|262257298|gb|EEY76034.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter calcoaceticus RUH2202]
Length = 345
Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats.
Identities = 130/359 (36%), Positives = 187/359 (52%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP IA P+ R ++RL+ + DH+ +D+ D +V
Sbjct: 1 MQLSDFSFELPDELIARYPLESRSASRLLHLD----SKGQYHDHMFTDIIDLFEDGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G R I + ++ + + + S K G L
Sbjct: 57 LNDTKVMKARLKGKR-----STGGAIEILVERMLNHTTAYCHIKSSNSPKAGAELFV--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G + V + L V S L + G +P+PPY R+ + D Y
Sbjct: 109 -GADNIPVIVRGRHEN---LFVVEFSEPIL-PVLEQYGQLPIPPYFNRE--AEEIDTERY 161
Query: 181 QTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
QT + + SVAAPTA LHF LL +L ++ FVTLHVGAGTFMPV+ +D +H
Sbjct: 162 QTVFHNPEKIASVAAPTASLHFDEVLLEKLEQKNVQKTFVTLHVGAGTFMPVRTDDITNH 221
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFI 297
IMHSE + T + + K+RG +++++GTT+ R LE+A G I W+G T IFI
Sbjct: 222 IMHSEWCDVPQETIDLILATKARGNKVIAIGTTATRALESAAQAHSGKIAAWTGDTQIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+F VD L++NFHLP+STLLMLVSA + Y+HA+ YRF+SYGD L+
Sbjct: 282 YPGYQFCIVDRLITNFHLPESTLLMLVSALSNRDNILAAYEHAVKSRYRFFSYGDAMLI 340
>gi|325981733|ref|YP_004294135.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Nitrosomonas sp. AL212]
gi|325531252|gb|ADZ25973.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Nitrosomonas sp. AL212]
Length = 351
Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats.
Identities = 149/360 (41%), Positives = 199/360 (55%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++FDF LPP IA P R +RL+ + D L ++LP FL + D +V
Sbjct: 8 MKTQDFDFYLPPGLIAQFPAEQRTGSRLLYLD---GITNHWQDALFTNLPDFLRAGDVLV 64
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + ++ + + R S K L
Sbjct: 65 FNDTQVIKARLLGKKAS-----GGKVEVLVERVLDDRHVVATIRASHAPKLDSQLVLADA 119
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ TVI + E + + + G +PLPPYIA RP D Y
Sbjct: 120 -----ISLTVIAR--EQEFYTLRFEHEKTVAELLDSYGQLPLPPYIA--RPATMTDEARY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF ++L +L +IG+ + +VTLHVGAGTF P++VE+ DHIM
Sbjct: 171 QTVYARNPGAVAAPTAGLHFDVDMLEQLRAIGVTMAYVTLHVGAGTFQPIRVENIVDHIM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-EDGIINPWSGFTNIFITP 299
H E I T A+ K GGRI++VGTTSLR LE + G + G T IFITP
Sbjct: 231 HRETYHIPQFTVDAIKQAKISGGRILAVGTTSLRALEACASLHQGGLVAGYGDTRIFITP 290
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GYRF+ +D L++NFHLP STLLMLVSAF G+E ++ YQHAI YRF+SYGD L+ +K
Sbjct: 291 GYRFQIIDRLLTNFHLPCSTLLMLVSAFAGMENIRQAYQHAIKGQYRFFSYGDAMLIERK 350
>gi|237740338|ref|ZP_04570819.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. 2_1_31]
gi|229422355|gb|EEO37402.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. 2_1_31]
Length = 351
Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats.
Identities = 135/355 (38%), Positives = 198/355 (55%), Gaps = 16/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+ LP I +P PRDSA+LM+++ I ++ +L D +V N
Sbjct: 13 LSDYDYFLPEELIGQKPREPRDSAKLMLINRKTG---EIEHKHFYNIIDYLQKGDVLVRN 69
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
TKVI A++ G + + L R+S ++W +P+K +K G L+
Sbjct: 70 ATKVIPARIYGHKES-----GGVLEVLLIKRISIDTWECLLKPAKKLKLGQKLYIGENK- 123
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
L A +++ G +L F G E + +G++PLPPYI RK YQT
Sbjct: 124 --ELIAELLEIKEDGNRILKFYYEG-SFEEVLDKLGSMPLPPYITRKLEN----KDRYQT 176
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ SVAAPTAGLHFT LL ++ GI++ + L VG GTF PV+ E+ +H MH
Sbjct: 177 VYAQRGESVAAPTAGLHFTEELLKKISEKGIEIIDIFLEVGLGTFRPVQTENVLEHKMHE 236
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I A+A+N K++G RI+SVGTT+ R LE++ E+G + T IFI PGYR
Sbjct: 237 ESFEISEKAAKAINEAKAQGRRIISVGTTATRALESSVDENGKLIAQKKDTEIFIYPGYR 296
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+ VD L++NFHLPKSTLLMLVSA E+ ++Y A+ Y F+S+GD+ ++
Sbjct: 297 FKIVDALITNFHLPKSTLLMLVSALYDREKMLEIYNLAVKEEYHFFSFGDSMFIY 351
>gi|330429272|gb|AEC20606.1| tRNA ribosyltransferase-isomerase [Pusillimonas sp. T7-7]
Length = 346
Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats.
Identities = 133/354 (37%), Positives = 188/354 (53%), Gaps = 20/354 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FD++LP IA P R +RL+ + + D +DLP L ND +VFN
Sbjct: 7 LSQFDYELPQELIAQSPAARRTGSRLLHLDSQAG----LHDRQFADLPQLLRPNDLLVFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NT+VI A+L G + ++ + + + + SK K G L
Sbjct: 63 NTRVIKARLRGQKES-----GGKVEVLIERISGTRTALAHVKASKSPKPGSKLLLAD--- 114
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
V GE+ + + + G PLPPYI + D YQT
Sbjct: 115 ----TFIVTVSGRQGELFELEFPE--RVLDLLDRHGATPLPPYIEH--AAEQEDDERYQT 166
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA G+VAAPTAGLHF +L++L ++GI FVTLHVGAGTF PV+ + DHIMH+
Sbjct: 167 VYATEPGAVAAPTAGLHFDQAMLAQLAAMGIAQAFVTLHVGAGTFQPVRTQKLGDHIMHA 226
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E + T + + + ++ GGR+V++GTTS+R LE+A G T +FITPGYR
Sbjct: 227 ERYSVPPETVELVKTTRAAGGRVVAIGTTSVRALESAAPHAHQNGVIEGDTQLFITPGYR 286
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ VD L++NFHLP+STLLMLVSA G+E ++ Y HA+ YRF+SYGD +
Sbjct: 287 YNWVDALLTNFHLPQSTLLMLVSALAGMEPIRRAYAHAVQSRYRFFSYGDAMFI 340
>gi|94267972|ref|ZP_01291047.1| Queuosine biosynthesis protein [delta proteobacterium MLMS-1]
gi|93451777|gb|EAT02535.1| Queuosine biosynthesis protein [delta proteobacterium MLMS-1]
Length = 370
Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats.
Identities = 134/369 (36%), Positives = 197/369 (53%), Gaps = 21/369 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+ LPP IA +P RD++RL+V ++D +L L+ D +VFN
Sbjct: 11 LSDYDYHLPPELIAQQPAARRDASRLLVCDCRDGG---LADRHFPELLDLLSPGDLLVFN 67
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSP-----------NSWSVYARPSKVIKK 111
+T+V A+L G + + + + ++W + SK +K+
Sbjct: 68 DTRVFPARLLGHKSSGGRGELLLLEYPVAQAAADVGSAEGGESSFHAW-ALCKTSKGVKE 126
Query: 112 GDILHFFSQDGQSRLEATVIDKWNTGEILLVFSIS-GIELERQISLVGTIPLPPYIARKR 170
G L F L+A V++ G + ++ G L+ ++ G +PLPPYI R
Sbjct: 127 GLKLLFGDD-----LQAEVVELGEGGRARVRLQVAAGQTLDGCLARHGRMPLPPYIRRSE 181
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
D YQT YA + G+VAAPTAGLHFT LL+ + + G++ VTLHVG GTF PV
Sbjct: 182 TETPEDRQRYQTVYAAVTGAVAAPTAGLHFTPELLAAIAAKGVRQARVTLHVGYGTFSPV 241
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWS 290
+V D +H +H E I A + ++ GGRI +VGTT++R LETA G + P S
Sbjct: 242 RVRDIREHAIHGEYYAITPENAALVEQTRAAGGRIWAVGTTAVRALETAADAAGRLTPGS 301
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G ++I PGYRF+ VD L++NFHLP+S+LL LVSA G Y HA++ YRF+SY
Sbjct: 302 GICELYIYPGYRFKVVDNLLTNFHLPRSSLLFLVSALAGRRRILAAYNHAVARGYRFFSY 361
Query: 351 GDTSLLFQK 359
GD + K
Sbjct: 362 GDAMAIINK 370
>gi|169794709|ref|YP_001712502.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baumannii AYE]
gi|213157920|ref|YP_002320718.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baumannii AB0057]
gi|215482296|ref|YP_002324478.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baumannii AB307-0294]
gi|294839351|ref|ZP_06784034.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter sp. 6013113]
gi|294857031|ref|ZP_06794800.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter sp. 6013150]
gi|301344894|ref|ZP_07225635.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baumannii AB056]
gi|301513643|ref|ZP_07238880.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baumannii AB058]
gi|301595286|ref|ZP_07240294.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baumannii AB059]
gi|226736726|sp|B7GWL7|QUEA_ACIB3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|226736727|sp|B7I973|QUEA_ACIB5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|238688034|sp|B0V628|QUEA_ACIBY RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|169147636|emb|CAM85499.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein ) [Acinetobacter baumannii AYE]
gi|213057080|gb|ACJ41982.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baumannii AB0057]
gi|213985971|gb|ACJ56270.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baumannii AB307-0294]
Length = 345
Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats.
Identities = 133/359 (37%), Positives = 187/359 (52%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP IA P+ R ++RL+ + DH+ +D+ D +V
Sbjct: 1 MQLSDFSFELPDELIARYPLETRSASRLLHLD----AKGQYHDHMFTDIIDLFEEGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G R I + ++ + + + S K G L
Sbjct: 57 LNDTKVMKARLKGKRA-----TGGAIEILVERMLNHTTAYCHIKASNSPKAGAELFV--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G + V + L V S L + G +P+PPY R+ + D Y
Sbjct: 109 -GADNIPVIVRGRHEN---LFVVEFSQPIL-PVLEQYGQLPIPPYFNRE--AEEIDTERY 161
Query: 181 QTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
QT + + SVAAPTA LHF LL+ L G+K FVTLHVGAGTFMPV+ +D +H
Sbjct: 162 QTVFHNPEKIASVAAPTASLHFDEELLAELDQKGVKKTFVTLHVGAGTFMPVRTDDITNH 221
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFI 297
+MHSE + T + + K+RG ++++VGTT+ R LE+A G I W+G T IFI
Sbjct: 222 VMHSEWCDVPQETIDLILATKARGNKVIAVGTTATRALESAAQAHGGKIAAWTGDTQIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY F VD L++NFHLP+STLLMLVSA E Y+HA+ YRF+SYGD L+
Sbjct: 282 YPGYEFCIVDRLITNFHLPESTLLMLVSALSNRENILAAYEHAVKDRYRFFSYGDAMLI 340
>gi|186477272|ref|YP_001858742.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia phymatum STM815]
gi|238691287|sp|B2JGG8|QUEA_BURP8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|184193731|gb|ACC71696.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Burkholderia phymatum STM815]
Length = 353
Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats.
Identities = 138/363 (38%), Positives = 193/363 (53%), Gaps = 21/363 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDFDLPP IA + R ++RL+ V+ P +D ++LP + D +VF
Sbjct: 3 TLSDFDFDLPPELIAQTALPERSASRLLEVNGQT-TPASFADRRFAELPECIQPGDLLVF 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKV+ A+ G + +I + + R SK G +L
Sbjct: 62 NDTKVLKARFLGQKAS-----GGKIEVLVERLTGERTALAQIRASKSPGPGTVLRLADA- 115
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ TV ++ L + I G +PLPPYI DA D YQ
Sbjct: 116 ----FDVTVGERVEPFYTLHFPD----DCLTLIEQFGRLPLPPYIEHD--PDAFDETRYQ 165
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YA+ G+VAAPTAGLHF ++ +RL + G++ +TLHVGAGTF PV+VE+ +H MH
Sbjct: 166 TVYAQNPGAVAAPTAGLHFDDSIFARLDAKGVERATLTLHVGAGTFQPVRVENIAEHKMH 225
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSL----RLLETATTEDGIINPWSGFTNIFI 297
SE + + + ++RG R+++VGTTS+ A + S T+IFI
Sbjct: 226 SEWYQLPQSLVDRIAATRARGNRVIAVGTTSMRALEAAARDADAAGKPLAATSAETDIFI 285
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGY+FR VD L++NFHLPKSTLLMLVSAF GIE + Y+HAI YRF+SYGD LL
Sbjct: 286 TPGYKFRVVDRLVTNFHLPKSTLLMLVSAFAGIETIRAAYRHAIDGRYRFFSYGDAMLLT 345
Query: 358 QKR 360
+
Sbjct: 346 RSE 348
>gi|296327943|ref|ZP_06870478.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium nucleatum subsp. nucleatum ATCC 23726]
gi|296154899|gb|EFG95681.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium nucleatum subsp. nucleatum ATCC 23726]
Length = 343
Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats.
Identities = 130/355 (36%), Positives = 197/355 (55%), Gaps = 16/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+ LP I +P PRDSA+LM++ + ++ +L D +V N
Sbjct: 5 LSDYDYFLPEELIGQKPREPRDSAKLMLIDRKNGS---VEHKNFYNIIDYLQKGDVLVRN 61
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
TKVI A++ G + + L R++ ++W +P+K +K G L+
Sbjct: 62 ATKVIPARIFGHK-----DTGGVLEILLIKRITLDTWECLLKPAKKLKLGQKLYIGENK- 115
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
L A +++ G +L F G E + +G++PLPPYI RK YQT
Sbjct: 116 --ELIAELLEIKEDGNRILKFYYEG-SFEEILDKLGSMPLPPYITRKLEN----KDRYQT 168
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ SVAAPTAGLHFT LL++++ G+++ + L VG GTF PV+ + +H MH
Sbjct: 169 VYAQRGESVAAPTAGLHFTEELLNKILDKGVEIVDIFLEVGLGTFRPVQTVNVLEHKMHE 228
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I A+ +N K+ G RI+SVGTT+ R LE++ E+G + T IFI PGY+
Sbjct: 229 ESFEISEKVAKIINEAKAEGRRIISVGTTATRALESSVDENGKLIAQKKDTGIFIYPGYK 288
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+ VD L++NFHLPKSTLLMLVSAF E+ ++Y A+ Y F+S+GD+ ++
Sbjct: 289 FKIVDALITNFHLPKSTLLMLVSAFYDREKMLEIYNLAVKEKYHFFSFGDSMFIY 343
>gi|319764640|ref|YP_004128577.1| s-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Alicycliphilus denitrificans BC]
gi|330826897|ref|YP_004390200.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Alicycliphilus denitrificans K601]
gi|317119201|gb|ADV01690.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Alicycliphilus denitrificans BC]
gi|329312269|gb|AEB86684.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Alicycliphilus denitrificans K601]
Length = 367
Score = 411 bits (1058), Expect = e-113, Method: Composition-based stats.
Identities = 141/367 (38%), Positives = 202/367 (55%), Gaps = 23/367 (6%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDF LP + IA P R S+RL+ SD + +LPA L D +VF
Sbjct: 9 TLSDFDFALPEALIAQHPAPVRSSSRLL-----DGRAAPPSDRIFHELPALLREGDLLVF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A++ G + + + ++ N + + SK G +H
Sbjct: 64 NDTRVVKARVFGEKAS-----GGRLELLIERVLAGNEVVAHMKVSKKPMPGATVHMAGGK 118
Query: 122 GQSRLEATVIDKW-NTGEILLVFSISGIELE---RQISLVGTIPLPPYIAR-----KRPI 172
+AT++ +W + L F++ G E + G +PLPPYI R P
Sbjct: 119 AAGGFDATLLSRWPDADGPLFRFALHGPAGETPWELMERHGHLPLPPYIERQQNAGHDPD 178
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+A D YQT +A+ G+VAAPTA LHF +L+ L G++ VTLHVGAGTF PVK
Sbjct: 179 EAEDAERYQTVFARAPGAVAAPTAALHFDDAVLAALAERGVQRASVTLHVGAGTFQPVKT 238
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
E +H MHSE + T AL + R GR+V+VGTT++R LE+ +G
Sbjct: 239 ESLAEHRMHSEWYEVPLATLAALERCRMRAGRVVAVGTTTVRTLESWARSG----QTTGE 294
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFITPG++F+ V +L++NFHLPKSTL+MLVSAF G E ++Y+HAI YRF+SYGD
Sbjct: 295 TDIFITPGFQFQVVQLLVTNFHLPKSTLMMLVSAFAGYEHVMQLYRHAIEERYRFFSYGD 354
Query: 353 TSLLFQK 359
+ LL +K
Sbjct: 355 SMLLERK 361
>gi|262380186|ref|ZP_06073341.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter radioresistens SH164]
gi|262298380|gb|EEY86294.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter radioresistens SH164]
Length = 346
Score = 411 bits (1058), Expect = e-113, Method: Composition-based stats.
Identities = 132/359 (36%), Positives = 192/359 (53%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP IA P+ R ++RL+ ++ SD +D+ D +V
Sbjct: 1 MQLSDFSFNLPDELIARYPLAQRSASRLLHLN----SEGQYSDRHFTDILELFEPGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G R + + + + S K G L
Sbjct: 57 LNDTKVMKARLKGRRA-----TGGAVEILVERIFDQTIAHCHIKASNSPKAGAELFI--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++ TV + L V S L + + G +P+PPY R+ +A D Y
Sbjct: 109 -GADEVKVTVQGRHEN---LFVVEFSQPIL-QVLDQHGQLPIPPYFNRE--AEAIDSERY 161
Query: 181 QTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
QT + + SVAAPTA LHF LL++L G++ FVTLHVGAGTF+PV+ D ++H
Sbjct: 162 QTVFHDPEKIASVAAPTASLHFDEVLLNKLSEKGVQQAFVTLHVGAGTFLPVRSIDIENH 221
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFI 297
IMHSE + T + + V++RG ++++VGTT+ R LE+A +G I W+G T IFI
Sbjct: 222 IMHSEWCEVPENTVELIKQVQTRGNKVIAVGTTATRALESAAQAHNGKIEAWTGDTQIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+F VD L++NFHLP+STLLMLVSA + Y+HA+ YRF+SYGD L+
Sbjct: 282 YPGYQFCVVDRLITNFHLPESTLLMLVSALSTRDHILAAYEHAVRKHYRFFSYGDAMLI 340
>gi|170703127|ref|ZP_02893943.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Burkholderia ambifaria IOP40-10]
gi|170131960|gb|EDT00472.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Burkholderia ambifaria IOP40-10]
Length = 416
Score = 411 bits (1058), Expect = e-113, Method: Composition-based stats.
Identities = 141/362 (38%), Positives = 197/362 (54%), Gaps = 21/362 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDF+LPP IA + R ++RL+ V P + D ++LP+ + D +VF
Sbjct: 64 TLSDFDFNLPPELIAQTALPERTASRLLEVDR-TVEPARLVDRNFAELPSCIAPGDLLVF 122
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+ G + +I + ++ R SK G L
Sbjct: 123 NDTRVLKARFFGQKAS-----GGKIEVLIERVTGTHTALAQIRASKSPGAGTTLRLADA- 176
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ TV ++ L F + L I G +PLPPYI DA D YQ
Sbjct: 177 ----FDVTVGERVEPF-FTLHFPQPCLTL---IEQHGRLPLPPYIEHD--ADANDETRYQ 226
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YA G+VAAPTAGLHF LL +L ++G++ +TLHVGAGTF PV+VE+ +H MH
Sbjct: 227 TVYASNPGAVAAPTAGLHFDLPLLEQLDAMGVERATLTLHVGAGTFQPVRVENIAEHRMH 286
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI----INPWSGFTNIFI 297
SE + + + ++RGG +++VGTTS+R LE A + T+IFI
Sbjct: 287 SEWYDLPQSLVDKIAATRARGGNVIAVGTTSMRALEAAARSADEAGRPLAATQAETDIFI 346
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI YRF+SYGD LL
Sbjct: 347 TPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIRAAYRHAIDERYRFFSYGDAMLLT 406
Query: 358 QK 359
++
Sbjct: 407 RR 408
>gi|313109242|ref|ZP_07795210.1| LOW QUALITY PROTEIN: S-adenosylmethionine:trna
ribosyltransferase-isomerase [Pseudomonas aeruginosa
39016]
gi|310881712|gb|EFQ40306.1| LOW QUALITY PROTEIN: S-adenosylmethionine:trna
ribosyltransferase-isomerase [Pseudomonas aeruginosa
39016]
Length = 338
Score = 411 bits (1058), Expect = e-113, Method: Composition-based stats.
Identities = 138/348 (39%), Positives = 197/348 (56%), Gaps = 20/348 (5%)
Query: 11 PPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQ 70
P + IA P+ R ++RL+ + ++ +DL +L D +VFNNT+VI A+
Sbjct: 2 PEALIARHPLPERRASRLLALDGPTGT---LAHRQFADLLDYLRPGDLMVFNNTRVIPAR 58
Query: 71 LNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATV 130
L G + ++ + + + + R SK K G + + A +
Sbjct: 59 LFGQKES-----GGKLEVLVERVLDQDRVLAHIRASKAPKPGMRILV-----EGGGSAEM 108
Query: 131 IDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGS 190
+ + + L + + L + VG +PLPPYI RP DA D YQT YA+ G+
Sbjct: 109 LQRHDA---LFELAFAEPVL-PLLERVGHMPLPPYI--DRPDDAADRERYQTVYAQRAGA 162
Query: 191 VAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAP 250
VAAPTAGLHF LL + + G+ FVTLHVGAGTF PV+VE +DH+MH E +
Sbjct: 163 VAAPTAGLHFDEALLEAIRAKGVDTAFVTLHVGAGTFQPVRVERIEDHVMHREWLEVGQD 222
Query: 251 TAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILM 310
A+++ ++RGGR+V+VGTTS+R LE+A DG + P+SG T+IFI PG F VD L+
Sbjct: 223 VVDAVSACRARGGRVVAVGTTSVRSLESAAR-DGELKPFSGDTDIFIYPGRPFHVVDALV 281
Query: 311 SNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+NFHLP+STLLMLVSAF G ET Y A++ YRF+SYGD + +
Sbjct: 282 TNFHLPESTLLMLVSAFAGYPETMAAYAAAVAQGYRFFSYGDAMFITR 329
>gi|299768785|ref|YP_003730811.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter sp. DR1]
gi|298698873|gb|ADI89438.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter sp. DR1]
Length = 345
Score = 411 bits (1058), Expect = e-113, Method: Composition-based stats.
Identities = 131/359 (36%), Positives = 187/359 (52%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP IA P+ R ++RL+ + DH+ +D+ D +V
Sbjct: 1 MQLSDFSFELPDELIARYPLESRSASRLLHLD----SKGKYHDHMFTDIIDLFEEGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G R I + ++ + + + S K G L+
Sbjct: 57 LNDTKVMKARLKGKR-----STGGAIEILVERMLNHTTAYCHIKSSNSPKAGAELYV--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G + V + L V S L + G +P+PPY R+ + D Y
Sbjct: 109 -GADNIPVIVRGRHEN---LFVVEFSQAIL-PVLEQYGQLPIPPYFNRE--AEEIDTERY 161
Query: 181 QTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
QT + + SVAAPTA LHF LL +L ++ FVTLHVGAGTFMPV+ +D +H
Sbjct: 162 QTVFHNPEKIASVAAPTASLHFDETLLEKLEQKNVQKTFVTLHVGAGTFMPVRTDDITNH 221
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFI 297
IMHSE + T + + K+RG ++++VGTT+ R LE+A G I W+G T IFI
Sbjct: 222 IMHSEWCDVPQETIDLILATKARGNKVIAVGTTATRALESAAQAHGGKIAAWTGDTQIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY F VD L++NFHLP+STLLMLVSA + Y+HA+ YRF+SYGD L+
Sbjct: 282 YPGYEFCIVDRLITNFHLPESTLLMLVSALSNRDNILAAYEHAVKSRYRFFSYGDAMLV 340
>gi|285018699|ref|YP_003376410.1| s-adenosylmethionine:tRNA ribosyltransferase-isomerase (queuosine
biosynthesis protein quea) [Xanthomonas albilineans GPE
PC73]
gi|283473917|emb|CBA16418.1| probable s-adenosylmethionine:trna ribosyltransferase-isomerase
(queuosine biosynthesis protein quea) [Xanthomonas
albilineans]
Length = 371
Score = 411 bits (1058), Expect = e-113, Method: Composition-based stats.
Identities = 139/360 (38%), Positives = 204/360 (56%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +F +DLP IA P+ R ++RL+ V P P D V DLP L D ++
Sbjct: 22 LKKSDFHYDLPDDLIAQAPLAERSASRLLWVPP---APAPFQDRQVRDLPQLLRVGDLLI 78
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + + + + + SK + G +
Sbjct: 79 FNDTRVIPARLFGQK-----QTGGRVEILIERLLGGQCARAQLGVSKSPQVGARIAL--- 130
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ EA V+ + + L F + G LE + G +PLPPYI R+ ++ D Y
Sbjct: 131 --DAGGEAEVLSR-DGAFYQLQFHVDG-TLEHWLQQAGRLPLPPYIRREPGLE--DRERY 184
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF LL L G++V +TLHVGAGTF PV+VE + H M
Sbjct: 185 QTVFAREAGAVAAPTAGLHFDVPLLQALHERGVEVGHITLHVGAGTFQPVRVEALEQHQM 244
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A + + ++ GGR+++VGTT +R LE+A ++DG + P++G T +FI PG
Sbjct: 245 HHEWLNVGASLVEQVRRTRAAGGRVIAVGTTVVRALESA-SKDGELYPFAGETQLFILPG 303
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
YR R+VD +++NFHLP+STLLM+V+AF G E Y+HAI+ YRF+SYGD LL+ +
Sbjct: 304 YRIRSVDAMVTNFHLPESTLLMMVAAFAGRERIFAAYRHAIAQRYRFFSYGDAMLLWSAQ 363
>gi|226946087|ref|YP_002801160.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Azotobacter
vinelandii DJ]
gi|259551438|sp|C1DE77|QUEA_AZOVD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|226721014|gb|ACO80185.1| Queuosine biosynthesis protein: S-adenosylmethionine tRNA
ribosyltransferase [Azotobacter vinelandii DJ]
Length = 349
Score = 411 bits (1058), Expect = e-113, Method: Composition-based stats.
Identities = 143/358 (39%), Positives = 198/358 (55%), Gaps = 20/358 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R ++RL+V+ + +DL L D +V
Sbjct: 1 MRVADFHFELPESLIARHPLAERRASRLLVLDGVTGD---LQHRRFADLLDHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGWKAS-----GGKLEILVERVLDDERVLAHVRASKSPKAGSRILI--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ EA ++ + + L + + VG +PLPPYI RP +A D Y
Sbjct: 110 --EGGGEAQMLARHDA---LFELRFD-QRVLPLLERVGHMPLPPYI--DRPDEAADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA G+VAAPTAGLHF LL+ + + FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAARAGAVAAPTAGLHFDEALLAAIGEKDVATAFVTLHVGAGTFQPVRVERIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A+ + ++RGGR+V+VGTTS+R LE+A DG++ P+SG T+IFI PG
Sbjct: 222 HREWLEVGQEVVDAVAACRARGGRVVAVGTTSVRSLESAAR-DGVLRPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F VD L++NFHLP+STLLMLVSAF G ET Y A++ YRF+SYGD + +
Sbjct: 281 RPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYAAAVAQGYRFFSYGDAMFITR 338
>gi|262068283|ref|ZP_06027895.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium periodonticum ATCC 33693]
gi|291378021|gb|EFE85539.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium periodonticum ATCC 33693]
Length = 343
Score = 411 bits (1058), Expect = e-113, Method: Composition-based stats.
Identities = 134/355 (37%), Positives = 199/355 (56%), Gaps = 16/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+ LP I +P PRDSA+LM+++ I ++ +L D +V N
Sbjct: 5 LSDYDYFLPEELIGQKPREPRDSAKLMLINRKTG---EIEHKHFYNIIDYLQKGDILVRN 61
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
TKVI A++ G + + L R+S ++W +P+K +K G L+
Sbjct: 62 ATKVIPARIYGHKES-----GGVLEVLLIKRISIDTWECLLKPAKKLKLGQKLYIGENK- 115
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
L A +++ G +L F G E + +G++PLPPYI RK YQT
Sbjct: 116 --ELIAELLEIKEDGNRILKFYYEG-SFEEVLDKLGSMPLPPYITRKLEN----KDRYQT 168
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ SVAAPTAGLHFT LL ++ GI++ + L VG GTF PV+ E+ +H MH
Sbjct: 169 VYAQRGESVAAPTAGLHFTEELLRKISEKGIEIVDIFLEVGLGTFRPVQTENVLEHKMHE 228
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I A+A+N K++G RI+SVGTT+ R LE++ E+G + T IFI PGY+
Sbjct: 229 ESFEISEKAAKAINEAKAQGRRIISVGTTATRALESSVDENGKLIAQKRDTGIFIYPGYQ 288
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+ VD L++NFHLPKSTLLMLVSA E+ ++Y+ A+ Y F+S+GD+ ++
Sbjct: 289 FKIVDALITNFHLPKSTLLMLVSALYDREKILEIYKMAVKEEYHFFSFGDSMFIY 343
>gi|224826233|ref|ZP_03699335.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Lutiella
nitroferrum 2002]
gi|224601334|gb|EEG07515.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Lutiella
nitroferrum 2002]
Length = 355
Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats.
Identities = 142/359 (39%), Positives = 211/359 (58%), Gaps = 20/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+ LP IA P R ++RL+ V L ++D + + D +V
Sbjct: 15 MQLSDFDYHLPDELIAQHPPEHRGASRLLHVDG-----LALADLSFGAVLERIQPGDVMV 69
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + ++ + + ++ + R SK K G + F
Sbjct: 70 FNDTRVIKARLFGEKAS-----GGKVEALVERVLDEHTVWAHVRASKSPKPGSTITF--- 121
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
R +A ++++ + + + + + + G +PLPPYI +R D+ D Y
Sbjct: 122 --AGRWQAEMVERDDA--LFKLRFLDAENVFDILEASGKLPLPPYI--ERDTDSDDDSRY 175
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +G+VAAPTAGLHFT +L L + G+ + +VTLHVGAGTF PV+VE+ +H M
Sbjct: 176 QTVYARERGAVAAPTAGLHFTEAMLDALRAKGVILAYVTLHVGAGTFQPVRVENIAEHKM 235
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSEI I T A+ + + G ++++VGTTS+R LE+A + G + G T+IFITPG
Sbjct: 236 HSEIYEIPPATVDAIAAAHAAGRKVLAVGTTSMRALESAA-QGGALVAGRGETDIFITPG 294
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HA+ H YRF+SYGD LL ++
Sbjct: 295 YRFRVVDRLLTNFHLPKSTLLMLVSAFAGVEPIRNAYRHAVEHRYRFFSYGDAMLLEKQ 353
>gi|19704665|ref|NP_604227.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
gi|22096012|sp|Q8R620|QUEA_FUSNN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|19714973|gb|AAL95526.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
Length = 351
Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats.
Identities = 130/355 (36%), Positives = 197/355 (55%), Gaps = 16/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+ LP I +P PRDSA+LM++ + ++ +L D +V N
Sbjct: 13 LSDYDYFLPEELIGQKPREPRDSAKLMLIDRKNGS---VEHKNFYNIIDYLQKGDILVRN 69
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
TKVI A++ G + + L R++ ++W +P+K +K G L+
Sbjct: 70 ATKVIPARIFGHK-----DTGGVLEILLIKRITLDTWECLLKPAKKLKLGQKLYIGENK- 123
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
L A +++ G +L F G E + +G++PLPPYI RK YQT
Sbjct: 124 --ELIAELLEIKEDGNRILKFYYEG-SFEEILDKLGSMPLPPYITRKLEN----KDRYQT 176
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ SVAAPTAGLHFT LL++++ G+++ + L VG GTF PV+ + +H MH
Sbjct: 177 VYAQRGESVAAPTAGLHFTEELLNKILDKGVEIVDIFLEVGLGTFRPVQTVNVLEHKMHE 236
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I A+ +N K+ G RI+SVGTT+ R LE++ E+G + T IFI PGY+
Sbjct: 237 ESFEISEKVAKIINEAKAEGRRIISVGTTATRALESSVDENGKLIAQKKDTGIFIYPGYK 296
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+ VD L++NFHLPKSTLLMLVSAF E+ ++Y A+ Y F+S+GD+ ++
Sbjct: 297 FKIVDALITNFHLPKSTLLMLVSAFYDREKMLEIYNLAVKEKYHFFSFGDSMFIY 351
>gi|326566011|gb|EGE16171.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Moraxella
catarrhalis 12P80B1]
Length = 363
Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats.
Identities = 145/369 (39%), Positives = 203/369 (55%), Gaps = 30/369 (8%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ ++D+ LP IA P+ R S+RL+ V N D +DLP L S D +V
Sbjct: 15 LLSDYDYHLPDDLIARYPLNERTSSRLLHVSKNS-----CQDLRFTDLPNLLKSGDLLVL 69
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN------SWSVYARPSKVIKKGDIL 115
N+TKVI A+L+G + + + + + + R S+ K G L
Sbjct: 70 NDTKVIKARLHGQK-----QTGGAVEVLIERILPDEINNNLYKALCHVRSSRSPKVGQTL 124
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
+ ++++ATVI + + IL S + + G +P+PPY RK D
Sbjct: 125 NL----ANNQMQATVIGRQDNLFILGFRS----PILADLDNYGQMPIPPYFERK--ADET 174
Query: 176 DYVDYQTTY--AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT + SVAAPTA LHF LL++L G+++ FVTLHVG+GTF PVKV+
Sbjct: 175 DDERYQTVFHNPTKSASVAAPTASLHFDDALLTQLRKKGVQIAFVTLHVGSGTFTPVKVD 234
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE--DGIINPWSG 291
+ DH+MH+E + A TA +N+ KS GGRI++VGTT R LETA G + + G
Sbjct: 235 NLADHVMHAEYAHLPASTATLINNTKSAGGRIIAVGTTVTRTLETAHRHRIHGELVEFLG 294
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T IFI P Y F VD L++NFHLPKSTLLMLVSAF G + ++ Y HAI + YRF+SYG
Sbjct: 295 DTQIFIYPPYEFGVVDCLITNFHLPKSTLLMLVSAFAGTQTIQEAYNHAIKNKYRFFSYG 354
Query: 352 DTSLLFQKR 360
D L + +
Sbjct: 355 DAMFLEKAQ 363
>gi|328950409|ref|YP_004367744.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Marinithermus hydrothermalis DSM 14884]
gi|328450733|gb|AEB11634.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Marinithermus hydrothermalis DSM 14884]
Length = 342
Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats.
Identities = 141/356 (39%), Positives = 197/356 (55%), Gaps = 22/356 (6%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++++ +DLPP RIA + PRDSAR+MV+H + + ++PA+L D +V
Sbjct: 9 RLEDYAYDLPPERIAQQGAEPRDSARMMVLHRETG---RLEHRIFREIPAYLRPGDVLVL 65
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N TKVI A+ + + L W RP + + G LHF
Sbjct: 66 NQTKVIPARTVARKP-----TGAVLEVLLLREEVAGRWRALVRPGRRARVGAELHF---- 116
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
L A V GE +L F+ ++ + +G PLPPYI YQ
Sbjct: 117 -DEGLRAVVEGIGEGGERILRFAG---DVWAHLERIGRTPLPPYIHA-----EVRPERYQ 167
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A++ GSVAAPTAGLHFT LL+RL +G++V ++TLHVG GTF PVK + + H+MH
Sbjct: 168 TVFARVPGSVAAPTAGLHFTPELLARLEGMGVEVRYLTLHVGPGTFKPVK-DSIERHVMH 226
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E + TA+A+N K+ G R+V+VGTT +R LE+A + G T +FI P Y
Sbjct: 227 EEAYHVPEETARAVNRAKAEGRRVVAVGTTVVRALESAWRAGEGVRAGEGATRLFIRPPY 286
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F AVD L++NFHLP+STLLMLV+AF G E T + Y+ A++ YRFYS GD L+
Sbjct: 287 TFHAVDALVTNFHLPRSTLLMLVAAFAGYETTMRAYRTAVAEGYRFYSLGDAMLIL 342
>gi|212704033|ref|ZP_03312161.1| hypothetical protein DESPIG_02086 [Desulfovibrio piger ATCC 29098]
gi|212672538|gb|EEB33021.1| hypothetical protein DESPIG_02086 [Desulfovibrio piger ATCC 29098]
Length = 370
Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats.
Identities = 132/373 (35%), Positives = 198/373 (53%), Gaps = 33/373 (8%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+++ + +DLP +IA P R ++RL+ + N L + H+ SDLP L +V
Sbjct: 12 LLQNYTYDLPQEQIAQYPPEQRGASRLLTMRRN--GALDLEHHMFSDLPDCLPEGALLVA 69
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVS------------PNSWSV----YARP 105
NN++V+ A+L G R ++ L + ++WS R
Sbjct: 70 NNSRVLQARLLGSR-----STGGKVEFLLLTPLPLVRAAATPVKGREDTWSAEVNGLVRS 124
Query: 106 SKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPY 165
+++G+ LHF + + T+++ G + G ++ + G IPLPPY
Sbjct: 125 GGSVREGETLHFGAG-----ISVTILECGTFGHRRVRMCWKG-DVADAFAATGHIPLPPY 178
Query: 166 IARKRPIDARDYVDYQTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVG 223
I R D+ YQT Y++ + GSVAAPTAGLHFT L L G + VTL+VG
Sbjct: 179 IKRSDA--EEDFSRYQTIYSREEKTGSVAAPTAGLHFTDELRETLRRRGFQWAEVTLYVG 236
Query: 224 AGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED 283
GTF PV+ ED +H MH E + TA A+ K++ +++VGTTS+R LE
Sbjct: 237 YGTFSPVRCEDIRNHQMHREYVELPEETANAIAEAKAQHRPVIAVGTTSVRTLEGVAQVC 296
Query: 284 GIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISH 343
G P++G+T+IF+ PG FR VD +++NFHLP+S+LLMLVSAF G + + YQ A+
Sbjct: 297 GRAQPFAGWTDIFLYPGRPFRVVDGIITNFHLPESSLLMLVSAFAGRKRILEAYQEAVKK 356
Query: 344 AYRFYSYGDTSLL 356
YRF+SYGD L+
Sbjct: 357 GYRFFSYGDAMLI 369
>gi|307297287|ref|ZP_07577093.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermotogales bacterium mesG1.Ag.4.2]
gi|306916547|gb|EFN46929.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Thermotogales bacterium mesG1.Ag.4.2]
Length = 336
Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats.
Identities = 139/357 (38%), Positives = 198/357 (55%), Gaps = 21/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V ++DF+LP IA +P PRDS+RL+V+ + +++ FL+ D +V
Sbjct: 1 MKVSDYDFELPEELIAQKPAIPRDSSRLLVIDRET---YSFEHRVFAEIEDFLHPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN++VI A+L G + ++ L ++ W RP IK G++L F
Sbjct: 58 LNNSRVIPARLLGKKE-----TGAKVEAVLTEKLGGGLWKAIVRPGSKIKPGNVLLF--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+++ VI+ + +L F G + + G + +PPY+ P + Y
Sbjct: 110 ---NKISCKVIEHCDDSSRILDF---GSVTDEDVKKAGLLAIPPYVK-YYPDNP---ESY 159
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ +GSVAAPTAGLHFT LL RL + V F+TLHVG GTF PVK E D H M
Sbjct: 160 QTVYSRPEGSVAAPTAGLHFTDTLLERLRKKDVDVQFITLHVGIGTFRPVKSETVDGHKM 219
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + + A+ L ++ RIV+VGTT++R LE+ G I SG T+IFI P
Sbjct: 220 HNEFFSVSSEVAERLERARTEKRRIVAVGTTTVRTLESIVARHGCIVGDSGHTDIFIYPP 279
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+A D L++NFHLP+STLLMLVSAF G E Y+ AI YRF+S+GD L+
Sbjct: 280 YTFKATDSLITNFHLPRSTLLMLVSAFAGRELILSAYREAILKRYRFFSFGDACLIL 336
>gi|148653721|ref|YP_001280814.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Psychrobacter sp. PRwf-1]
gi|172048561|sp|A5WGS3|QUEA_PSYWF RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|148572805|gb|ABQ94864.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Psychrobacter sp. PRwf-1]
Length = 390
Score = 411 bits (1056), Expect = e-113, Method: Composition-based stats.
Identities = 145/375 (38%), Positives = 198/375 (52%), Gaps = 34/375 (9%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
V ++D+DLP IA P+ R ++RLM + VI D SDLP L + D IVFN
Sbjct: 29 VADYDYDLPDEYIARYPLAERSASRLMYLPAQKENTAVIQDRQFSDLPELLQAGDLIVFN 88
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSP-------------NSWSVYARPSKVI 109
+TKV+ A+L G + ++ + N + R SK
Sbjct: 89 DTKVMKARLFGQK-----DTGGKVEVLVERLTDDTEFTTDESGQSFDNVALCHVRASKAP 143
Query: 110 KKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARK 169
K G L G +E +I + IL + +LE+ G +P+PPY R
Sbjct: 144 KLGQRLVL----GDGNIECVMIGRHENLFILSFKNPILPDLEQ----YGELPIPPYFERH 195
Query: 170 RPIDARDYVDYQTTYAK--IQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
D D V YQT + SVAAPTA LHF +L +L GI +VTLHVGAGTF
Sbjct: 196 --ADETDNVRYQTVFHDPTKLASVAAPTASLHFDDKVLKQLADKGINTAYVTLHVGAGTF 253
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA----TTED 283
PVK ++ +H MHSE + TA +N G +++++GTT R+LETA E
Sbjct: 254 APVKTDNLLNHTMHSEYANLPQATADLINQTHQNGNKVIAIGTTVTRVLETAYQKTADEH 313
Query: 284 GIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISH 343
G I+ WSG T+IFI PG++F +D L++NFHLPKSTLLMLVSAF G ++ Y+HA++
Sbjct: 314 GHISTWSGDTDIFIYPGFKFGVIDKLLTNFHLPKSTLLMLVSAFAGKANIEQAYEHAVAQ 373
Query: 344 AYRFYSYGDTSLLFQ 358
YRF+SYGD LL +
Sbjct: 374 KYRFFSYGDAMLLER 388
>gi|325123435|gb|ADY82958.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queuosine
biosynthesis protein ) [Acinetobacter calcoaceticus
PHEA-2]
Length = 345
Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats.
Identities = 129/359 (35%), Positives = 186/359 (51%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP IA P+ R ++RL+ + DH+ +D+ D +V
Sbjct: 1 MQLSDFSFELPDELIARYPLESRSASRLLHLD----SKGQYHDHMFTDIIDLFEEGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G R I + ++ + + + S K L
Sbjct: 57 LNDTKVMKARLKGKR-----STGGAIEILVERMLNHTTAYCHIKSSNSPKADAELFV--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G + V + L V S L + G +P+PPY R+ + D Y
Sbjct: 109 -GADNIPVIVRGRHEN---LFVVEFSQPIL-PVLEQYGQLPIPPYFNRE--AEEIDTERY 161
Query: 181 QTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
QT + + SVAAPTA LHF LL++L ++ FVTLHVGAGTFMPV+ +D +H
Sbjct: 162 QTVFHNPEKIASVAAPTASLHFDEELLAKLEQKNVQKSFVTLHVGAGTFMPVRTDDITNH 221
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFI 297
+MHSE + T + + K+RG ++++VGTT+ R LE+A G I W+G T IFI
Sbjct: 222 VMHSEWCDVPQETIDLILATKARGNKVIAVGTTATRALESAAQAHGGKIAAWTGDTQIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY F VD L++NFHLP+STLLMLVSA + Y+HA+ YRF+SYGD L+
Sbjct: 282 YPGYEFCIVDRLITNFHLPESTLLMLVSALSNRDNILAAYEHAVKSRYRFFSYGDAMLI 340
>gi|260494286|ref|ZP_05814417.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. 3_1_33]
gi|260198432|gb|EEW95948.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. 3_1_33]
Length = 348
Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats.
Identities = 131/355 (36%), Positives = 196/355 (55%), Gaps = 16/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+ LP I +P PRDSA+LM+++ I ++ +L D +V N
Sbjct: 10 LSDYDYFLPEELIGQKPREPRDSAKLMLINRKTGS---IEHKHFYNIVDYLQKGDVLVRN 66
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
TKVI A++ G + + L R+S ++W +P+K +K G L+
Sbjct: 67 ATKVIPARIFGHK-----DTGGVLEILLVKRISLDTWECLLKPAKKLKLGQKLYIGENK- 120
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
L A +++ G +L F E + +G++PLPPYI RK YQT
Sbjct: 121 --ELIAELLEIKEDGNRILKF-YHEGSFEEILDKLGSMPLPPYITRKLEN----KDRYQT 173
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ SVAAPTAGLHFT LL +++ G+++ + L VG GTF PV+ + +H MH
Sbjct: 174 VYAQRGESVAAPTAGLHFTEELLKKILDKGVEIVDIFLEVGLGTFRPVQTVNVLEHKMHE 233
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I A+ +N K+ G RI+SVGTT+ R LE++ E+G + T IFI PGY+
Sbjct: 234 ESFEISEKAAKIINEAKTEGRRIISVGTTATRALESSVDENGKLIAQKKDTGIFIYPGYK 293
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+ VD L++NFHLPKSTLLMLVSAF E+ ++Y A+ Y F+S+GD+ ++
Sbjct: 294 FKIVDALITNFHLPKSTLLMLVSAFYDREKMLEIYNLAVKEKYHFFSFGDSMFIY 348
>gi|296113505|ref|YP_003627443.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Moraxella
catarrhalis RH4]
gi|295921199|gb|ADG61550.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Moraxella
catarrhalis RH4]
gi|326559375|gb|EGE09800.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Moraxella
catarrhalis 46P47B1]
gi|326568088|gb|EGE18172.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Moraxella
catarrhalis BC7]
gi|326572408|gb|EGE22400.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Moraxella
catarrhalis BC8]
Length = 357
Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats.
Identities = 145/369 (39%), Positives = 203/369 (55%), Gaps = 30/369 (8%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ ++D+ LP IA P+ R S+RL+ V N D +DLP L S D +V
Sbjct: 9 LLSDYDYHLPDDLIARYPLNERTSSRLLHVSKNS-----CQDLRFTDLPNLLKSGDLLVL 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN------SWSVYARPSKVIKKGDIL 115
N+TKVI A+L+G + + + + + + R S+ K G L
Sbjct: 64 NDTKVIKARLHGQK-----QTGGAVEVLIERILPDEINNNLYKALCHVRSSRSPKVGQTL 118
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
+ ++++ATVI + + IL S + + G +P+PPY RK D
Sbjct: 119 NL----ANNQMQATVIGRQDNLFILGFRS----PILADLDNYGQMPIPPYFERK--ADET 168
Query: 176 DYVDYQTTY--AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT + SVAAPTA LHF LL++L G+++ FVTLHVG+GTF PVKV+
Sbjct: 169 DDERYQTVFHNPTKSASVAAPTASLHFDDALLTQLRKKGVQIAFVTLHVGSGTFTPVKVD 228
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE--DGIINPWSG 291
+ DH+MH+E + A TA +N+ KS GGRI++VGTT R LETA G + + G
Sbjct: 229 NLADHVMHAEYAHLPASTATLINNTKSAGGRIIAVGTTVTRTLETAHRHRIHGELVEFLG 288
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T IFI P Y F VD L++NFHLPKSTLLMLVSAF G + ++ Y HAI + YRF+SYG
Sbjct: 289 DTQIFIYPPYEFGVVDCLITNFHLPKSTLLMLVSAFAGTQTIQEAYNHAIKNKYRFFSYG 348
Query: 352 DTSLLFQKR 360
D L + +
Sbjct: 349 DAMFLEKAQ 357
>gi|294785109|ref|ZP_06750397.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. 3_1_27]
gi|294486823|gb|EFG34185.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. 3_1_27]
Length = 348
Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats.
Identities = 131/355 (36%), Positives = 194/355 (54%), Gaps = 16/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+ LP I +P PRDSA+LM++ I ++ +L D +V N
Sbjct: 10 LSDYDYFLPEELIGQKPREPRDSAKLMLIDRKTGS---IEHKHFYNIVDYLQKGDVLVRN 66
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
TKVI A++ G + + L R S ++W +P+K +K G L+
Sbjct: 67 ATKVIPARIFGHK-----DTGGVLEILLIKRTSLDTWECLLKPAKKLKLGQKLYIGENK- 120
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
L A +++ G +L F G E + +G++PLPPYI RK YQT
Sbjct: 121 --ELIAELLEIKEDGNRILKFYYEG-SFEEILDKLGSMPLPPYITRKLEN----KDRYQT 173
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ SVAAPTAGLHFT LL +++ G+ + + L VG GTF PV+ + +H MH
Sbjct: 174 VYAQRGESVAAPTAGLHFTEELLKKILDKGVVIVDIFLEVGLGTFRPVQTVNVLEHKMHE 233
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I A+ +N K+ G RI+SVGTT+ R LE++ ++G + T IFI PGY+
Sbjct: 234 ESFEISEKAAKIINEAKTEGRRIISVGTTATRALESSVDKNGKLIAQKKDTGIFIYPGYK 293
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+ VD L++NFHLPKSTLLMLVSAF E+ ++Y A+ Y F+S+GD+ ++
Sbjct: 294 FKIVDALITNFHLPKSTLLMLVSAFYDREKMLEIYNLAVKEKYHFFSFGDSMFIY 348
>gi|94265186|ref|ZP_01288948.1| Queuosine biosynthesis protein [delta proteobacterium MLMS-1]
gi|93454327|gb|EAT04634.1| Queuosine biosynthesis protein [delta proteobacterium MLMS-1]
Length = 370
Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats.
Identities = 136/374 (36%), Positives = 196/374 (52%), Gaps = 31/374 (8%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+ LPP IA +P RD++RL+V + + D +L L+ D +VFN
Sbjct: 11 LSDYDYHLPPELIAQQPAARRDASRLLVCDCRGAG---LVDRHFPELLDLLSPGDLLVFN 67
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHM----------------RVSPNSWSVYARPS 106
+T+V A+L G + L S ++W + S
Sbjct: 68 DTRVFPARLLGRKAS-----GGRGELLLLEYPVAPAAADVGSAAGGESSFHAW-ALCKTS 121
Query: 107 KVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSIS-GIELERQISLVGTIPLPPY 165
K +K+G L F L+A V++ G + ++ G L+ ++ G +PLPPY
Sbjct: 122 KGVKEGLKLLFGDD-----LQAEVVELGEGGRARVRLQVAAGQTLDGCLARHGRMPLPPY 176
Query: 166 IARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAG 225
I R D YQT YA + G+VAAPTAGLHFT LL+ + + G++ VTLHVG G
Sbjct: 177 IRRSEAETPEDRQRYQTVYAAVTGAVAAPTAGLHFTPELLAAIAAKGVRQARVTLHVGYG 236
Query: 226 TFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI 285
TF PV+V D +H +H E I A + ++ GGRI +VGTT++R LETA G
Sbjct: 237 TFSPVRVRDIREHAIHGEYYAITPENAALVEQTRAAGGRIWAVGTTAVRALETAADAAGR 296
Query: 286 INPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAY 345
+ P SG ++I PGYRF+ VD L++NFHLP+S+LL LVSA G Y HA++ Y
Sbjct: 297 LTPGSGICELYIYPGYRFKVVDNLLTNFHLPRSSLLFLVSALAGRRRILAAYNHAVARGY 356
Query: 346 RFYSYGDTSLLFQK 359
RF+SYGD + K
Sbjct: 357 RFFSYGDAMAIINK 370
>gi|329114921|ref|ZP_08243677.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Acetobacter
pomorum DM001]
gi|326695818|gb|EGE47503.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Acetobacter
pomorum DM001]
Length = 358
Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats.
Identities = 163/355 (45%), Positives = 223/355 (62%), Gaps = 14/355 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++FDF LP S IA P PR++ARL+ + + P + +D + DLP+ L D +V
Sbjct: 5 RTEDFDFHLPESLIAQEPARPREAARLL----DATQPGIFADRHIRDLPSLLKRGDLLVA 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNT VI AQL+G+R E +I TL SW V R ++ +K GDI+ F
Sbjct: 61 NNTAVIRAQLHGLR------GEAKIGITLDQIQPDGSWHVLVRNARRLKVGDIIAFPGVQ 114
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
A V+ G +L FS G + + G + LPPYI R A+D DY
Sbjct: 115 D----IARVLALEPGGGAVLRFSAEGDAFDVFLQKAGALALPPYIHRPEGPTAQDTSDYA 170
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T + + +G+VAAPTAGLHFT LL + + G + +TLHVGAGTF+PV+ + +H MH
Sbjct: 171 TIFERNKGAVAAPTAGLHFTPALLKAVDATGAQRCTLTLHVGAGTFLPVREAEISEHKMH 230
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
SE G I TA+ +N+ + GGRI+++GTTSLRLLETAT E+GI++P+ G T+IFI PGY
Sbjct: 231 SERGIITPETAERINTTRKAGGRIIAIGTTSLRLLETATDENGIVHPFDGTTSIFIRPGY 290
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+FRAVD+L++NFHLP+STL MLVSAF G+E +++Y HA++ YRFYSYGD LL
Sbjct: 291 QFRAVDMLLTNFHLPRSTLFMLVSAFAGVERARQIYAHAVASGYRFYSYGDACLL 345
>gi|326572548|gb|EGE22537.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Moraxella
catarrhalis CO72]
Length = 375
Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats.
Identities = 145/369 (39%), Positives = 203/369 (55%), Gaps = 30/369 (8%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ ++D+ LP IA P+ R S+RL+ V N D +DLP L S D +V
Sbjct: 15 LLSDYDYHLPDDLIARYPLNERTSSRLLHVSKNS-----CQDLRFTDLPNLLKSGDLLVL 69
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN------SWSVYARPSKVIKKGDIL 115
N+TKVI A+L+G + + + + + + R S+ K G L
Sbjct: 70 NDTKVIKARLHGQK-----QTGGAVEVLIERILPDEINNNLYKALCHVRSSRSPKVGQTL 124
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
+ ++++ATVI + + IL S + + G +P+PPY RK D
Sbjct: 125 NL----ANNQMQATVIGRQDNLFILGFRS----PILADLDNYGQMPIPPYFERK--ADET 174
Query: 176 DYVDYQTTY--AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT + SVAAPTA LHF LL++L G+++ FVTLHVG+GTF PVKV+
Sbjct: 175 DDERYQTVFHNPTKSASVAAPTASLHFDDALLTQLRKKGVQIAFVTLHVGSGTFTPVKVD 234
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE--DGIINPWSG 291
+ DH+MH+E + A TA +N+ KS GGRI++VGTT R LETA G + + G
Sbjct: 235 NLADHVMHAEYAHLPASTATLINNTKSAGGRIIAVGTTVTRTLETAHRHRIHGELVEFLG 294
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T IFI P Y F VD L++NFHLPKSTLLMLVSAF G + ++ Y HAI + YRF+SYG
Sbjct: 295 DTQIFIYPPYEFGVVDCLITNFHLPKSTLLMLVSAFAGTQTIQEAYNHAIKNKYRFFSYG 354
Query: 352 DTSLLFQKR 360
D L + +
Sbjct: 355 DAMFLEKAQ 363
>gi|322434368|ref|YP_004216580.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Acidobacterium sp. MP5ACTX9]
gi|321162095|gb|ADW67800.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Acidobacterium sp. MP5ACTX9]
Length = 368
Score = 410 bits (1055), Expect = e-112, Method: Composition-based stats.
Identities = 142/371 (38%), Positives = 207/371 (55%), Gaps = 19/371 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +FD++LP IA P R ++R++ + + D + LP L + D ++
Sbjct: 1 MLVSDFDYELPEELIAQTPPETRGASRMLRMDRASGA---LVDDSFASLPECLKAGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINR-----REKEISCTLHMRVSPN----SWSVYARPSKVIKK 111
N+T+VI A+L GVR + I L ++S + +W RP++ ++
Sbjct: 58 LNDTRVIPARLFGVRAGLHTQHNSPAPTGRIEVLLTSQISADDEGSTWETLVRPARKVQP 117
Query: 112 GDILHFFSQD--GQSRLEATVIDKWNTGEILLV--FSISGIELERQISLVGTIPLPPYIA 167
G+ LHF+ + L A V+ GE L + L + +G +PLPPYI
Sbjct: 118 GETLHFYDAERPSAPALTAEVLAAGEFGERTLRLIPADPQEPLTAILERIGHLPLPPYIY 177
Query: 168 RKR--PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAG 225
R P D YQT +A+ GS AAPTAGLHFT +L+ L + G++V +TLHVG G
Sbjct: 178 RPDEAPNTTADRERYQTVFAQPAGSAAAPTAGLHFTPEILAALKARGVEVQTLTLHVGLG 237
Query: 226 TFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI 285
TF PV+ E T+D +H+E + A TA+A+ ++ G RIV+VGTT R LE G
Sbjct: 238 TFQPVRAERTEDIRLHAEPYTLPAATAEAIQRAQAEGRRIVAVGTTVTRTLEHCAAI-GN 296
Query: 286 INPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAY 345
+ P SG T++F++PG+ FR V L++NFHLP+STL+MLVSAF G E T Y HA+ Y
Sbjct: 297 LAPHSGTTSLFLSPGHEFRVVGGLLTNFHLPQSTLVMLVSAFAGREATLAAYAHAVRERY 356
Query: 346 RFYSYGDTSLL 356
RF+SYGD L+
Sbjct: 357 RFFSYGDCMLI 367
>gi|258541319|ref|YP_003186752.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Acetobacter
pasteurianus IFO 3283-01]
gi|256632397|dbj|BAH98372.1| tRNA ribosyltransferase/isomerase [Acetobacter pasteurianus IFO
3283-01]
gi|256635454|dbj|BAI01423.1| tRNA ribosyltransferase/isomerase [Acetobacter pasteurianus IFO
3283-03]
gi|256638509|dbj|BAI04471.1| tRNA ribosyltransferase/isomerase [Acetobacter pasteurianus IFO
3283-07]
gi|256641563|dbj|BAI07518.1| tRNA ribosyltransferase/isomerase [Acetobacter pasteurianus IFO
3283-22]
gi|256644618|dbj|BAI10566.1| tRNA ribosyltransferase/isomerase [Acetobacter pasteurianus IFO
3283-26]
gi|256647673|dbj|BAI13614.1| tRNA ribosyltransferase/isomerase [Acetobacter pasteurianus IFO
3283-32]
gi|256650726|dbj|BAI16660.1| tRNA ribosyltransferase/isomerase [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256653717|dbj|BAI19644.1| tRNA ribosyltransferase/isomerase [Acetobacter pasteurianus IFO
3283-12]
Length = 360
Score = 410 bits (1055), Expect = e-112, Method: Composition-based stats.
Identities = 162/355 (45%), Positives = 224/355 (63%), Gaps = 14/355 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++FDF LP S IA P PR++ARL+ + + P + +D + DLP+ L D +V
Sbjct: 5 RTEDFDFHLPESLIAQEPARPREAARLL----DATQPDMFADRHIRDLPSLLKRGDLLVA 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNT VI AQL+G+R E +I TL SW V R ++ +K GD + F
Sbjct: 61 NNTAVIRAQLHGLR------GEAKIGITLDQIQPDGSWHVLVRNARRLKVGDTIAFPGVQ 114
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+R++A G +L FS G + + G + LPPYI R A+D DY
Sbjct: 115 DTARVQAL----EPGGGAVLQFSAEGDAFDAFLQKAGALALPPYIHRPEGPTAQDTSDYA 170
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T + + +G+VAAPTAGLHFT LL + + G + +TLHVGAGTF+PV+ + +H MH
Sbjct: 171 TIFERNKGAVAAPTAGLHFTPALLKAIDATGAQRCTLTLHVGAGTFLPVREAEISEHKMH 230
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
SE G I TA+ +N+ + GGRI+++GTTSLRLLETAT E+GI++P+ G T+IFI PGY
Sbjct: 231 SERGIITPETAERINATRKAGGRIIAIGTTSLRLLETATDENGIVHPFDGTTSIFIRPGY 290
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+FRAVD+L++NFHLP+STL MLVSAF G+E +++Y HA++ YRFYSYGD LL
Sbjct: 291 QFRAVDMLLTNFHLPRSTLFMLVSAFAGVERARQIYAHAVASGYRFYSYGDACLL 345
>gi|326575583|gb|EGE25507.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Moraxella
catarrhalis O35E]
Length = 369
Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats.
Identities = 145/369 (39%), Positives = 203/369 (55%), Gaps = 30/369 (8%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ ++D+ LP IA P+ R S+RL+ V N D +DLP L S D +V
Sbjct: 9 LLSDYDYHLPDDLIARYPLNERTSSRLLHVSKNS-----CQDLRFTDLPNLLKSGDLLVL 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN------SWSVYARPSKVIKKGDIL 115
N+TKVI A+L+G + + + + + + R S+ K G L
Sbjct: 64 NDTKVIKARLHGQK-----QTGGAVEVLIERILPDEINNNLYKALCHVRSSRSPKVGQTL 118
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
+ ++++ATVI + + IL S + + G +P+PPY RK D
Sbjct: 119 NL----ANNQMQATVIGRQDNLFILGFRS----PILADLDNYGQMPIPPYFERK--ADET 168
Query: 176 DYVDYQTTY--AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT + SVAAPTA LHF LL++L G+++ FVTLHVG+GTF PVKV+
Sbjct: 169 DDERYQTVFHNPTKSASVAAPTASLHFDDALLTQLRKKGVQIAFVTLHVGSGTFTPVKVD 228
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE--DGIINPWSG 291
+ DH+MH+E + A TA +N+ KS GGRI++VGTT R LETA G + + G
Sbjct: 229 NLADHVMHAEYAHLPASTATLINNTKSAGGRIIAVGTTVTRTLETAHRHRIHGELVEFLG 288
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T IFI P Y F VD L++NFHLPKSTLLMLVSAF G + ++ Y HAI + YRF+SYG
Sbjct: 289 DTQIFIYPPYEFGVVDCLITNFHLPKSTLLMLVSAFAGTQTIQEAYNHAIKNKYRFFSYG 348
Query: 352 DTSLLFQKR 360
D L + +
Sbjct: 349 DAMFLEKAQ 357
>gi|171058260|ref|YP_001790609.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Leptothrix
cholodnii SP-6]
gi|170775705|gb|ACB33844.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Leptothrix
cholodnii SP-6]
Length = 356
Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats.
Identities = 143/362 (39%), Positives = 201/362 (55%), Gaps = 19/362 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
V +FDFDLPP IA P R +RL+ + S P D + +LP LN D +VF
Sbjct: 6 TVADFDFDLPPELIAQHPAPERSGSRLL----DASAPAQPVDRIFHELPGLLNPGDLLVF 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRV-----SPNSWSVYARPSKVIKKGDILH 116
N+T+VI A+L G + + + + + + R SK + G +
Sbjct: 62 NDTQVIRARLFGAKDS-----GGAVEALVERVLPAAAGGGHEVWAHLRASKSPRAGQSVL 116
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
F + G+ + A V+ + + L + G +PLPPYI +A D
Sbjct: 117 FRNDQGE-QFSADVLGRCGPEDSLFHLRFPSDAF-ALLERYGHVPLPPYITH--ADEADD 172
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT +A+ G+VAAPTA LHF LL+ L + G++ VTLHVGAGTF PV+V+ D
Sbjct: 173 VRRYQTVFARHPGAVAAPTAALHFDEALLAALEARGVRRASVTLHVGAGTFQPVRVDRLD 232
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H MHSE + T A+ + ++ GG++V+VGTT+LR LE+A G++ + T+IF
Sbjct: 233 QHRMHSEWFEVPQATVDAIAATRAAGGKVVAVGTTTLRALESAAR-GGVLRAGAQETDIF 291
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPG+ F+ VD L++NFHLPKSTLLMLVSAF G +Y+HAIS YRF+SYGD LL
Sbjct: 292 ITPGFAFQVVDRLVTNFHLPKSTLLMLVSAFAGHATMHALYRHAISRGYRFFSYGDAMLL 351
Query: 357 FQ 358
+
Sbjct: 352 TR 353
>gi|171320041|ref|ZP_02909111.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Burkholderia ambifaria MEX-5]
gi|171094700|gb|EDT39744.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Burkholderia ambifaria MEX-5]
Length = 416
Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats.
Identities = 141/362 (38%), Positives = 198/362 (54%), Gaps = 21/362 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDF+LPP IA + R ++RL+ V + P + D ++LP+ + D +VF
Sbjct: 64 TLSDFDFNLPPELIAQTALPERTASRLLEVD-HTVEPARLVDRNFAELPSCIAPGDLLVF 122
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+ G + +I + ++ R SK G L
Sbjct: 123 NDTRVLKARFFGQKAS-----GGKIEVLIERVTGTHTALAQIRASKSPGAGTTLRLADA- 176
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ TV ++ L F + L I G +PLPPYI DA D YQ
Sbjct: 177 ----FDVTVGERVEPF-FTLHFPQPCLTL---IEQHGRLPLPPYIEHD--ADANDETRYQ 226
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YA G+VAAPTAGLHF LL +L ++G++ +TLHVGAGTF PV+VE+ +H MH
Sbjct: 227 TVYASNPGAVAAPTAGLHFDLPLLEKLDAMGVERATLTLHVGAGTFQPVRVENIAEHRMH 286
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI----INPWSGFTNIFI 297
SE + + + ++RGG +++VGTTS+R LE A + T+IFI
Sbjct: 287 SEWYDLPQSLIDKIAATRARGGNVIAVGTTSMRALEAAARSADEAGRPLAATQAETDIFI 346
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI YRF+SYGD LL
Sbjct: 347 TPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIRAAYRHAIDERYRFFSYGDAMLLT 406
Query: 358 QK 359
++
Sbjct: 407 RR 408
>gi|296114522|ref|ZP_06833175.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Gluconacetobacter hansenii ATCC 23769]
gi|295978878|gb|EFG85603.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Gluconacetobacter hansenii ATCC 23769]
Length = 352
Score = 410 bits (1053), Expect = e-112, Method: Composition-based stats.
Identities = 165/357 (46%), Positives = 222/357 (62%), Gaps = 14/357 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+V +FDFDLP + IA P PRDSAR++ V P D V DLP L + D +V
Sbjct: 4 LVSDFDFDLPVALIADHPARPRDSARMLEVPPQ----GAFCDRHVRDLPGCLRAGDILVA 59
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T VI AQL +R I TL + +W AR S+ +K GDIL F
Sbjct: 60 NDTAVIPAQLAAMRGA------ARIGITLDRILPDGTWHALARNSRRLKPGDILTFAP-- 111
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
S + A V+ + G +++ F + G ++ + G + LPPYIAR D DY
Sbjct: 112 --SAVTAEVVVCEDAGGVVMRFDVEGEAFDQFLHDTGHLALPPYIARPDGPTEEDRKDYS 169
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A+ +G+VAAPTAGLHFT LLS L + G+ +TLHVGAGTF+P++ E +H MH
Sbjct: 170 TIFAQHRGAVAAPTAGLHFTPALLSGLEAAGVLRQTLTLHVGAGTFLPMRSEQISEHRMH 229
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
+E G I A A +N+ ++ GGR+++VGTTSLRLLE+AT EDG+++P+ G T IFI PGY
Sbjct: 230 AERGTITAHAAHRINAARAAGGRVIAVGTTSLRLLESATDEDGVVHPFHGETAIFIRPGY 289
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
RFRAVD+L++NFHLP+STL MLVSAF G + Y+HA++ YRFYSYGD LL +
Sbjct: 290 RFRAVDMLLTNFHLPRSTLFMLVSAFAGQARMRAAYEHAMAAGYRFYSYGDACLLHR 346
>gi|237744129|ref|ZP_04574610.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. 7_1]
gi|229431358|gb|EEO41570.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. 7_1]
Length = 351
Score = 410 bits (1053), Expect = e-112, Method: Composition-based stats.
Identities = 131/355 (36%), Positives = 196/355 (55%), Gaps = 16/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+ LP I +P PRDSA+LM+++ I ++ +L D +V N
Sbjct: 13 LNDYDYFLPEELIGQKPREPRDSAKLMLINRKTGS---IEHKHFYNIVDYLQKGDVLVRN 69
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
TKVI A++ G + + L R+S ++W +P+K +K G L+
Sbjct: 70 ATKVIPARIFGHK-----DTGGVLEILLVKRISLDTWECLLKPAKKLKLGQKLYIGENK- 123
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
L A +++ G +L F E + +G++PLPPYI RK YQT
Sbjct: 124 --ELIAELLEIKEDGNRILKF-YHEGSFEEILDKLGSMPLPPYITRKLEN----KDRYQT 176
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ SVAAPTAGLHFT LL +++ G+++ + L VG GTF PV+ + +H MH
Sbjct: 177 VYAQRGESVAAPTAGLHFTEELLKKILDKGVEIVDIFLEVGLGTFRPVQTVNVLEHKMHE 236
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I A+ +N K+ G RI+SVGTT+ R LE++ E+G + T IFI PGY+
Sbjct: 237 ESFEISEKAAKIINEAKTEGRRIISVGTTATRALESSVDENGKLIAQKKDTGIFIYPGYK 296
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+ VD L++NFHLPKSTLLMLVSAF E+ ++Y A+ Y F+S+GD+ ++
Sbjct: 297 FKIVDALITNFHLPKSTLLMLVSAFYDREKMLEIYNLAVKEKYHFFSFGDSMFIY 351
>gi|326559774|gb|EGE10184.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Moraxella
catarrhalis 7169]
gi|326565038|gb|EGE15238.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Moraxella
catarrhalis 103P14B1]
gi|326568506|gb|EGE18578.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Moraxella
catarrhalis BC1]
gi|326574145|gb|EGE24093.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Moraxella
catarrhalis 101P30B1]
Length = 357
Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats.
Identities = 145/369 (39%), Positives = 203/369 (55%), Gaps = 30/369 (8%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ ++D+ LP IA P+ R S+RL+ V N D +DLP L S D +V
Sbjct: 9 LLSDYDYHLPDDLIARYPLNERTSSRLLHVSKNS-----CQDLRFTDLPNLLKSGDLLVL 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN------SWSVYARPSKVIKKGDIL 115
N+TKVI A+L+G + + + + + + R S+ K G L
Sbjct: 64 NDTKVIKARLHGQK-----QTGGAVEVLIERILPDEINNNLYKALCHVRSSRSPKVGQTL 118
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
+ ++++ATVI + + IL S + + G +P+PPY RK D
Sbjct: 119 NL----ANNQMQATVIGRQDNLFILGFRS----PILADLDNYGQMPIPPYFERK--ADET 168
Query: 176 DYVDYQTTY--AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQT + SVAAPTA LHF LL++L G+++ FVTLHVG+GTF PVKV+
Sbjct: 169 DDERYQTVFHNPTKSASVAAPTASLHFDDALLTQLRKKGVQIAFVTLHVGSGTFTPVKVD 228
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE--DGIINPWSG 291
+ DH+MH+E + A TA +N+ KS GGRI++VGTT R LETA G + + G
Sbjct: 229 NLADHVMHAEYAHLPASTATLINNTKSAGGRIIAVGTTVTRTLETAHLHRIHGELVEFLG 288
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T IFI P Y F VD L++NFHLPKSTLLMLVSAF G + ++ Y HAI + YRF+SYG
Sbjct: 289 DTQIFIYPPYEFGVVDCLITNFHLPKSTLLMLVSAFAGTQTIQEAYNHAIKNKYRFFSYG 348
Query: 352 DTSLLFQKR 360
D L + +
Sbjct: 349 DAMFLEKAQ 357
>gi|15606227|ref|NP_213605.1| queuosine biosynthesis protein [Aquifex aeolicus VF5]
gi|3914538|sp|O67043|QUEA_AQUAE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|2983418|gb|AAC07001.1| queuosine biosynthesis protein [Aquifex aeolicus VF5]
Length = 334
Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats.
Identities = 138/357 (38%), Positives = 197/357 (55%), Gaps = 23/357 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EFD++LP IA P PR SARLMV++ I +LP +L D +V
Sbjct: 1 MRIEEFDYELPEELIAKYPAVPRHSARLMVLNRKDQS---IKHDTFINLPDYLEEGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L G + + L + P+ W K I+ G ++
Sbjct: 58 FNNTKVIPARLYGRKP-----TGGRVEVVLTDFIKPDEWKALIG-GKKIRPGLVIEVAPD 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ V++ G+ + G E + I G IP+PPY+ KR + D V Y
Sbjct: 112 -----FKVEVLEHIEEGKFRVKLL--GEEPLKLIDKYGHIPIPPYL--KREEEPIDRVYY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +AK +G+VA+PTA LHF+ LL +L GI F+TLHV GTF PVKVE ++H +
Sbjct: 163 QTIFAKEKGAVASPTASLHFSEELLEKLKEKGINFAFITLHVSYGTFKPVKVERVEEHRV 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
E I T + + K +G R+V+VGTT +R LET P+ G+T+++I PG
Sbjct: 223 DPEYVKIPKETVEKIKETKEKGKRVVAVGTTVVRALET-----KPFEPFEGWTDLYIYPG 277
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
++F+ VD +++NFHLP+S+LL+LVSAF G E K Y+ A+ YRFYSYGD L+
Sbjct: 278 FKFKVVDAMITNFHLPRSSLLILVSAFAGREFILKAYREAVEKRYRFYSYGDGMLIL 334
>gi|296536218|ref|ZP_06898336.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseomonas
cervicalis ATCC 49957]
gi|296263440|gb|EFH09947.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseomonas
cervicalis ATCC 49957]
Length = 360
Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats.
Identities = 154/359 (42%), Positives = 218/359 (60%), Gaps = 14/359 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++FDF LP + IA P PRD+ARL+V + P + D V DLPA+L D +V
Sbjct: 12 LRAEDFDFALPEALIAQAPARPRDAARLLV-----AAPEGLRDQGVRDLPAWLRPGDLMV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L R E + L+ S W R +K ++ GDIL
Sbjct: 67 VNDTRVIPARLRARR------GEARLEIMLNRAESGGMWHALVRNAKKLRPGDILTI--- 117
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+G L V+++ G L+ F +L + G IPLPPYIAR D DY
Sbjct: 118 EGAPELAPRVVERQEGGAALIDFGPDQGKLAAALEKAGEIPLPPYIARPDGPRPEDREDY 177
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
Q +A+ G+VAAPTA LHFT LL+ L G+ +TLHVGAGTF+P++ ++ +H +
Sbjct: 178 QPIFAREPGAVAAPTASLHFTPGLLAALAERGVGQVSLTLHVGAGTFLPIRGDNPREHKL 237
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G I A ++N ++RGGRIV++GTT+LRLLE+A E G+++P+ G T+IF+ PG
Sbjct: 238 HAEWGHISEAAAASINETRARGGRIVAIGTTALRLLESAVDERGVVHPFRGLTDIFLLPG 297
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
+ FR+ D+L++NFHLPKS+L MLVSAF G + Y HA++ YRFYSYGD SLLF++
Sbjct: 298 HVFRSADLLLTNFHLPKSSLFMLVSAFAGQARMRDAYAHAVAQGYRFYSYGDASLLFRE 356
>gi|169632430|ref|YP_001706166.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baumannii SDF]
gi|238688246|sp|B0VRB1|QUEA_ACIBS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|169151222|emb|CAO99905.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein ) [Acinetobacter baumannii]
Length = 351
Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats.
Identities = 132/359 (36%), Positives = 186/359 (51%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP IA P+ R ++RL+ + DH+ +D+ D +V
Sbjct: 1 MQLSDFSFELPDELIARYPLETRSASRLLHLD----AKGQYHDHMFTDIIDLFEEGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G R I + + + + + S K G L
Sbjct: 57 LNDTKVMKARLKGKRT-----TGGAIEILVERMPNHTTAYCHIKASNSPKAGAELFV--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G + V + L V S L + G +P+PPY R+ + D Y
Sbjct: 109 -GADNIPVIVRGRHEN---LFVVEFSQPIL-PVLEQYGQLPIPPYFNRE--AEEIDTERY 161
Query: 181 QTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
QT + + SVAAPTA LHF LL++L G+K FVTLHVGAGTFMPV+ +D +H
Sbjct: 162 QTVFHNPEKIASVAAPTASLHFDEELLAKLDQKGVKKTFVTLHVGAGTFMPVRTDDITNH 221
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFI 297
+MHSE + T + + K+RG ++++VGTT+ R LE+A G I W+G T IFI
Sbjct: 222 VMHSEWCDVPQETIDLILATKARGNKVIAVGTTATRALESAAQAHGGKIAAWTGDTQIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY F VD L++NFHLP+STLLMLVSA E Y+HA+ Y F+SYGD L+
Sbjct: 282 YPGYEFCIVDRLITNFHLPESTLLMLVSALSNRENILAAYEHAVKDRYHFFSYGDAMLI 340
>gi|254302820|ref|ZP_04970178.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
[Fusobacterium nucleatum subsp. polymorphum ATCC 10953]
gi|148323012|gb|EDK88262.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
[Fusobacterium nucleatum subsp. polymorphum ATCC 10953]
Length = 343
Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats.
Identities = 130/355 (36%), Positives = 194/355 (54%), Gaps = 16/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+ LP I RP PRDSA+LM++ + ++ +L D +V N
Sbjct: 5 LSDYDYFLPEELIGQRPREPRDSAKLMLIDRKNES---VEHKKFYNIIDYLQKGDVLVRN 61
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
TKVI A++ G + + L R++ ++W +P+K +K G L+
Sbjct: 62 ATKVIPARIFGHK-----DTGGVLEILLIKRITLDTWECLLKPAKKLKLGQKLYIGENK- 115
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
L A +++ G +L F E + +G++PLPPYI K YQT
Sbjct: 116 --ELIAELLEIKEDGNRILKF-YHEGSFEEILDKLGSMPLPPYITSKLEN----KDRYQT 168
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ SVAAPTAGLHFT LL +++ G+ + + L VG GTF PV+ E+ +H MH
Sbjct: 169 VYAQRGESVAAPTAGLHFTEELLKKILDKGVVIVDIFLEVGLGTFRPVQTENVLEHKMHE 228
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I A+ +N K+ G RI+SVGTT+ R LE++ E+G + T IFI PGY+
Sbjct: 229 ESFEISEKVAKIINEAKAEGRRIISVGTTATRALESSVDENGKLIAQKKDTGIFIYPGYK 288
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+ VD L++NFHLPKSTLLMLVSAF E+ ++Y A+ Y F+S+GD+ ++
Sbjct: 289 FKIVDALITNFHLPKSTLLMLVSAFYDREKMLEIYNLAVKEKYHFFSFGDSMFIY 343
>gi|46199001|ref|YP_004668.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Thermus
thermophilus HB27]
gi|55981027|ref|YP_144324.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Thermus
thermophilus HB8]
gi|81567700|sp|Q72JS5|QUEA_THET2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|81600605|sp|Q5SMH0|QUEA_THET8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|56966767|pdb|1WDI|A Chain A, Crystal Structure Of Tt0907 From Thermus Thermophilus Hb8
gi|46196625|gb|AAS81041.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Thermus
thermophilus HB27]
gi|55772440|dbj|BAD70881.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Thermus
thermophilus HB8]
Length = 345
Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats.
Identities = 152/358 (42%), Positives = 200/358 (55%), Gaps = 19/358 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D+ LPP +IA V PRD ARLMVV+ P ++ V DLP FL D +VFN
Sbjct: 4 LEAYDYHLPPEQIAQEGVEPRDMARLMVVYRE--GPFRVAHKRVRDLPEFLRPGDVLVFN 61
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+KVI A+L + ++ L SP W P++ G L S
Sbjct: 62 ESKVIPARLLARKP-----TGGKVEILLVRERSPGLWEALLGPARKAPPGTRLLLLSPKD 116
Query: 123 QS---RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ L+A V+ G LL F +L + VG +PLPPYI K P
Sbjct: 117 LAPVPGLQAEVVAVEEDGVRLLRFQG---DLVAHLEEVGEVPLPPYIKAKIP-----MER 168
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ GSVAAPTAGLHFT LL RL +G+++ F+TLHVG GTF PVK D + H
Sbjct: 169 YQTVYARRPGSVAAPTAGLHFTPELLERLREMGVELRFLTLHVGPGTFRPVKG-DPEKHE 227
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH+E I A+A+N K+ G R+V+VGTT +R LE+A E + G T +FI P
Sbjct: 228 MHAEPYAIPEEVAEAVNRAKAEGRRVVAVGTTVVRALESAYREGVGVVAGEGETRLFIRP 287
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+ VD L +NFHLP+STLLMLV+AF G E T + Y+ A++ YRFYS GD L+
Sbjct: 288 PYTFKVVDALFTNFHLPRSTLLMLVAAFLGRERTLEAYRLAVAEGYRFYSLGDAMLIL 345
>gi|118595266|ref|ZP_01552613.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Methylophilales bacterium HTCC2181]
gi|118441044|gb|EAV47671.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Methylophilales bacterium HTCC2181]
Length = 348
Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats.
Identities = 140/359 (38%), Positives = 198/359 (55%), Gaps = 19/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EF++ LP IA P+ R +RL+V +P ISD + L ND ++
Sbjct: 1 MRIEEFNYILPDELIAQSPLKNRGDSRLLVANP---VGKKISDSYFKNFTVLLKKNDLVI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A++ G + ++ + ++ ++ + R SK I G +
Sbjct: 58 FNDTRVIKARIFGTKT-----TGGKVELLIERILNNHTATALIRTSKRIDIGLTIAI--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
VI + N L + G + G +PLPPYI R + D + Y
Sbjct: 110 --DCINSIKVISRNNN---LFEIQLLGGSFYDLLEKHGHVPLPPYIERN--DEDEDEIRY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +AK G+VAAPTAGLHF+ L + GI + F+TLHVG+GTF P+K ED + H M
Sbjct: 163 QTVFAKEAGAVAAPTAGLHFSEQDLRGMDKKGIAMAFITLHVGSGTFQPIKTEDINQHTM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H EI I + + K++ GRIV++GTT LR LE+A ED II T+IFI PG
Sbjct: 223 HQEIYNIPKSIIKKIAETKAKNGRIVAIGTTVLRALESAYEED-IIKTGYNETDIFIKPG 281
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
+ F+ VD L +NFHLPKSTLLMLVSAF G + K +Y+HA+ + YRF+SYGD + QK
Sbjct: 282 FNFKVVDALFTNFHLPKSTLLMLVSAFAGSKFIKAIYRHAVDNKYRFFSYGDAMFIEQK 340
>gi|254253195|ref|ZP_04946513.1| Queuosine biosynthesis protein [Burkholderia dolosa AUO158]
gi|124895804|gb|EAY69684.1| Queuosine biosynthesis protein [Burkholderia dolosa AUO158]
Length = 405
Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats.
Identities = 141/362 (38%), Positives = 196/362 (54%), Gaps = 21/362 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDF+LPP IA + R ++RL+ V P + P + D ++LP+ + D +VF
Sbjct: 53 TLSDFDFNLPPELIAQTALPERTASRLLDVDPAV-EPARLVDRRFAELPSCIARGDLLVF 111
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKV+ A+ G + +I + ++ R SK G L
Sbjct: 112 NDTKVLKARFFGQKAS-----GGKIEVLVERVTGTHTALAQIRASKSPGAGTTLRLADA- 165
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ TV ++ I G +PLPPYI DA D YQ
Sbjct: 166 ----FDVTVGERVEP----FFTLYFPQPCLDLIERYGRLPLPPYIEHD--PDATDETRYQ 215
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YA G+VAAPTAGLHF LL++L ++G++ +TLHVGAGTF PV+VE+ +H MH
Sbjct: 216 TVYASNPGAVAAPTAGLHFDEPLLAKLDAMGVERATLTLHVGAGTFQPVRVENIAEHKMH 275
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI----INPWSGFTNIFI 297
SE + + + ++RGG +++VGTTSLR LE A + T+IFI
Sbjct: 276 SEWYDLPQSLVDKIAATRARGGNVIAVGTTSLRALEAAARSADEAGRPLAATQAETDIFI 335
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFR VD L++NFHLPKSTL+MLVSAF GIE + Y+HAI YRF+SYGD LL
Sbjct: 336 TPGYRFRVVDRLITNFHLPKSTLMMLVSAFAGIETIRAAYRHAIERRYRFFSYGDAMLLT 395
Query: 358 QK 359
++
Sbjct: 396 RR 397
>gi|302338528|ref|YP_003803734.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Spirochaeta smaragdinae DSM 11293]
gi|301635713|gb|ADK81140.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Spirochaeta smaragdinae DSM 11293]
Length = 346
Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats.
Identities = 138/359 (38%), Positives = 181/359 (50%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F FDLP IA P R ++R++VV SD P + + +V
Sbjct: 1 MKTSDFSFDLPEELIAQTPSEKRGASRMLVVDRKSGT---FRHLHTSDFPEIVEDDVLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
N++KV A+L G + ++ L S + W+ +K + G F
Sbjct: 58 VNDSKVRKARLFGS-----SETGGKVEFLLLHPDSQDHCLWTAMVSKAKKQRPGKR-FLF 111
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
Q + +EA D + S + + + G IPLPPYI R+ D
Sbjct: 112 PQGIEGIIEAINGDSTGPYRRV---RFSIPVDDAYLEVNGHIPLPPYIRRE--DTELDEE 166
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YA+ GSVAAPTAGLHFT + L I V +TLHVG GTF+PV+ E+ DH
Sbjct: 167 RYQTVYARHPGSVAAPTAGLHFTEETFTALKKRSIPVARLTLHVGLGTFLPVRSEEITDH 226
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFI 297
MH E I A +N K G +IV+VGTTS+R LE+A TE+G I S T +FI
Sbjct: 227 EMHRERYEISQDVADTINRAKYDGRKIVAVGTTSVRTLESAWDTEEGCIRTGSAETRLFI 286
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY F+ VD L +NFH PKSTLLMLVSAF G E Y A+ YRF+SYGD +
Sbjct: 287 YPGYTFKVVDRLFTNFHTPKSTLLMLVSAFAGKELIDAAYAEALKERYRFFSYGDAMYI 345
>gi|172059699|ref|YP_001807351.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia ambifaria MC40-6]
gi|238689181|sp|B1YTH0|QUEA_BURA4 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|171992216|gb|ACB63135.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Burkholderia ambifaria MC40-6]
Length = 355
Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats.
Identities = 142/362 (39%), Positives = 197/362 (54%), Gaps = 21/362 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDF+LPP IA + R ++RL+ V + P + D +LP+ + D +VF
Sbjct: 3 TLSDFDFNLPPELIAQTALPERTASRLLEVD-HTVEPARLVDRNFVELPSCIAPGDLLVF 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+ G + +I + ++ R SK G L
Sbjct: 62 NDTRVLKARFFGQKAS-----GGKIEVLIERVTGTHTALAQIRASKSPGAGTTLRLADA- 115
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ TV ++ L F + L I G +PLPPYI DA D YQ
Sbjct: 116 ----FDVTVGERVEPF-FTLHFPQPCLTL---IEQHGRLPLPPYIEHD--ADASDETRYQ 165
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YA G+VAAPTAGLHF LL RL ++G++ +TLHVGAGTF PV+VE+ +H MH
Sbjct: 166 TVYASNPGAVAAPTAGLHFDLPLLERLDAMGVERATLTLHVGAGTFQPVRVENIAEHRMH 225
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI----INPWSGFTNIFI 297
SE + + + ++RGG +++VGTTS+R LE A + T+IFI
Sbjct: 226 SEWYDLPQSLVDKIAATRARGGNVIAVGTTSMRALEAAARSADEAGRPLAATQAETDIFI 285
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI YRF+SYGD LL
Sbjct: 286 TPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIRAAYRHAIDQRYRFFSYGDAMLLT 345
Query: 358 QK 359
++
Sbjct: 346 RR 347
>gi|218295523|ref|ZP_03496336.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Thermus
aquaticus Y51MC23]
gi|218244155|gb|EED10681.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Thermus
aquaticus Y51MC23]
Length = 345
Score = 408 bits (1048), Expect = e-111, Method: Composition-based stats.
Identities = 149/358 (41%), Positives = 200/358 (55%), Gaps = 19/358 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D+ LPP RIA V PRD AR+MVV+ P ++ V DLP FL D +VFN
Sbjct: 4 LEAYDYHLPPERIAQEGVEPRDLARMMVVYRE--GPFRVAHRRVRDLPEFLRPGDLLVFN 61
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+KVI A+L + + L +P W P++ G L F S
Sbjct: 62 ESKVIPARLLARKP-----TGGRVEVLLVQERAPGLWEALLGPARRAPVGTELFFLSPRD 116
Query: 123 ---QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
L+A V+ G LL +L + VG +PLPPYI + P+
Sbjct: 117 WRPVPGLKAEVVGVEADGVRLLQIQG---DLLAHLEEVGEVPLPPYIKAQIPL-----ER 168
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GSVAAPTAGLHFT L+ RL +G++++F+TLHVG GTF PVK D + H
Sbjct: 169 YQTVYAKRPGSVAAPTAGLHFTPELMERLRGMGVELHFLTLHVGPGTFRPVKG-DPEKHA 227
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH+E I TA A+N K+ G R+++VGTT +R LE+A E + +G T +FI P
Sbjct: 228 MHAEPYEIPEATALAVNRAKAEGRRVIAVGTTVVRALESAYREGEGVAAGAGETRLFIRP 287
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+ +D L +NFHLP+STLLMLV+AF G E T + Y+ A+ YRFYS GD L+
Sbjct: 288 PYAFKVIDGLFTNFHLPRSTLLMLVAAFLGYERTMEAYRLAVEEGYRFYSLGDAMLIL 345
>gi|158520100|ref|YP_001527970.1| queuosine biosynthesis protein [Desulfococcus oleovorans Hxd3]
gi|158508926|gb|ABW65893.1| Queuosine biosynthesis protein [Desulfococcus oleovorans Hxd3]
Length = 349
Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats.
Identities = 157/357 (43%), Positives = 208/357 (58%), Gaps = 13/357 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+V ++D+DLPP RIA +PV RDS+RL+ + IS H DLP L +D +V
Sbjct: 3 LVSDYDYDLPPDRIAQQPVTQRDSSRLLRLDRARGG---ISHHRFYDLPDLLRPSDLLVV 59
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS-WSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G++ R I +R + S ++ G F
Sbjct: 60 NNTRVVPARLEGIKETG-GRAGALILDYPGVRTEKGVICRCMVKASGRLRPGTRFLF--- 115
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA-RDYVD 179
+ RL A+V+D + G L FS G + ++ + VG PLPPYI R R D
Sbjct: 116 --EDRLSASVVDAAD-GLYTLCFSCDG-DFDQTLFAVGRTPLPPYITRNRDGAPCDDRTC 171
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA G+VAAPTAGLHFT N+L RL + GI VTLHVG GTF+PV+V D DH
Sbjct: 172 YQTVYADRDGAVAAPTAGLHFTPNVLDRLAAKGISTAPVTLHVGHGTFLPVRVSDIRDHA 231
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE + A TA A+N+ + GGR+V+VGTT +R LE G I +SG ++FI P
Sbjct: 232 MHSERFEVPAATAAAINATRRDGGRVVAVGTTVVRTLEYVARTCGEIRAFSGACDLFIYP 291
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY F+A+ +++NFHLP+STLLMLVSAF G E+ Y+ AI YRFYSYGD L+
Sbjct: 292 GYNFQAIAAMITNFHLPRSTLLMLVSAFTGREKVLAAYEAAIQEKYRFYSYGDAMLI 348
>gi|115350667|ref|YP_772506.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia ambifaria AMMD]
gi|122323978|sp|Q0BI51|QUEA_BURCM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|115280655|gb|ABI86172.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Burkholderia ambifaria AMMD]
Length = 355
Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats.
Identities = 141/362 (38%), Positives = 197/362 (54%), Gaps = 21/362 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDF+LPP IA + R ++RL+ V + P + D +LP+ + D +VF
Sbjct: 3 TLSDFDFNLPPELIAQTALPERTASRLLEVD-HTVEPARLVDRNFVELPSCIAPGDLLVF 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+ G + +I + ++ R SK G L
Sbjct: 62 NDTRVLKARFFGQKAS-----GGKIEVLIERVTGTHTALAQIRASKSPGTGTTLRLADA- 115
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ TV ++ L F + L I G +PLPPYI DA D YQ
Sbjct: 116 ----FDVTVGERVEPF-FTLHFPQPCLTL---IEQHGRLPLPPYIEHD--ADANDETRYQ 165
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YA G+VAAPTAGLHF LL +L ++G++ +TLHVGAGTF PV+VE+ +H MH
Sbjct: 166 TVYASNPGAVAAPTAGLHFDLPLLEQLDAMGVERATLTLHVGAGTFQPVRVENIAEHRMH 225
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI----INPWSGFTNIFI 297
SE + + + ++RGG +++VGTTS+R LE A + T+IFI
Sbjct: 226 SEWYDLPQSLVDKIAATRARGGNVIAVGTTSMRALEAAARSADEAGRPLAATQAETDIFI 285
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI YRF+SYGD LL
Sbjct: 286 TPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIRAAYRHAIDERYRFFSYGDAMLLT 345
Query: 358 QK 359
++
Sbjct: 346 RR 347
>gi|237742323|ref|ZP_04572804.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. 4_1_13]
gi|229429971|gb|EEO40183.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. 4_1_13]
Length = 351
Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats.
Identities = 127/355 (35%), Positives = 195/355 (54%), Gaps = 16/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+ LP I +P PRDSA+L++++ I ++ +L D +V N
Sbjct: 13 LSDYDYFLPEELIGQKPREPRDSAKLILINRKTGS---IEHKHFYNIVDYLQKGDVLVRN 69
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
TKVI A++ G + + L R+S ++W +P+K +K G L+
Sbjct: 70 ATKVIPARIFGHK-----DTGGVLEILLVKRISLDTWECLLKPAKKLKLGQKLYIGENK- 123
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
L A +++ G +L F E + +G++PLPPYI RK YQT
Sbjct: 124 --ELIAELLEIKEDGNRILKF-YHEGSFEEILDKLGSMPLPPYITRKLEN----KDRYQT 176
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ SVAAPTAGLHFT LL +++ G+ + + L VG GTF PV+ E+ +H MH
Sbjct: 177 VYAQRGESVAAPTAGLHFTEELLKKILDKGVVIVDIFLEVGLGTFRPVQTENVLEHKMHE 236
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I A+ +N K+ G RI+SVGTT+ R LE++ ++G + T IFI PGY+
Sbjct: 237 ESFEISEKAAKIINEAKTEGRRIISVGTTATRALESSVDKNGKLIAQKKDTGIFIYPGYK 296
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+ ++ L++NFHLPKSTLLMLVSA E+ ++Y A+ Y F+S+GD+ ++
Sbjct: 297 FKIINALITNFHLPKSTLLMLVSALYDREKMLEIYNLAVKEKYHFFSFGDSMFIY 351
>gi|326315377|ref|YP_004233049.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Acidovorax
avenae subsp. avenae ATCC 19860]
gi|323372213|gb|ADX44482.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Acidovorax
avenae subsp. avenae ATCC 19860]
Length = 369
Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats.
Identities = 141/373 (37%), Positives = 203/373 (54%), Gaps = 29/373 (7%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDF LPP IA P R ++RL+ V D + +LP L D +VF
Sbjct: 11 TLSDFDFSLPPELIAQHPAPERSASRLL-----DGRADVPVDRIFRELPDLLQPGDLLVF 65
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRV------SPNSWSVYARPSKVIKKGDIL 115
N+T+V+ A++ G + ++ + + + N + + SK G +L
Sbjct: 66 NDTRVVKARVFGEKAS-----GGKVELLIERVLVGPNGEAGNEVVAHMKVSKKPAVGAML 120
Query: 116 HFFSQDGQSRLEATVIDKW-NTGEILLVFSISGIELE---RQISLVGTIPLPPYIARK-- 169
H AT++ +W + L F++S + E + G +PLPPYI R
Sbjct: 121 HMAGGPAGGGFGATLLGRWPDEDGPLFRFALSSPDGEGPHALMERHGHMPLPPYIERHQD 180
Query: 170 ---RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGT 226
P A D YQT +A+ G+VAAPTA LHF +L+ L + G++ VTLHVGAGT
Sbjct: 181 GGGDPDAAEDAERYQTVFARAPGAVAAPTAALHFDEGVLASLAARGVERASVTLHVGAGT 240
Query: 227 FMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII 286
F PVK E DH MHSE + T AL + RGGR+V+VGTT++R LE+
Sbjct: 241 FQPVKTESLADHRMHSEWYEVPLATLAALERCRQRGGRVVAVGTTTVRTLESWARSG--- 297
Query: 287 NPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYR 346
+G T+IFITPG+ F+ VD+L++NFHLPKSTL+ML+SAF G + +Y+HAI+ YR
Sbjct: 298 -QATGDTDIFITPGFAFQVVDLLVTNFHLPKSTLMMLISAFTGYDHAMDLYRHAIAQRYR 356
Query: 347 FYSYGDTSLLFQK 359
F+SYGD LL ++
Sbjct: 357 FFSYGDAMLLARR 369
>gi|89054208|ref|YP_509659.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Jannaschia
sp. CCS1]
gi|122498901|sp|Q28RM8|QUEA_JANSC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|88863757|gb|ABD54634.1| Queuosine biosynthesis protein [Jannaschia sp. CCS1]
Length = 355
Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats.
Identities = 164/349 (46%), Positives = 218/349 (62%), Gaps = 15/349 (4%)
Query: 14 RIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNG 73
IA RP PR SARL+V D V+DLP+ L D +V N+T+VI A+L G
Sbjct: 14 LIATRPARPRSSARLLVADG-----PETHDLTVADLPSMLRRGDRLVLNDTRVIPARLTG 68
Query: 74 VRFCHINRRE--KEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVI 131
R + E I TL + +WS A+P + +K G+ + F + L+A V
Sbjct: 69 TRTRMSAQGEVTARIEVTLMEPQADGTWSALAKPMRKLKAGEKIIF-----SNALQADVH 123
Query: 132 DKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSV 191
+ L F++ G + + ++ G +PLPPYIA KR DARDY DYQT +AK G+V
Sbjct: 124 AMDE--GLRLAFNVEGDDFDAALNAAGAMPLPPYIAGKRAPDARDYHDYQTIWAKRAGAV 181
Query: 192 AAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPT 251
AAPTA LHF +L+ L S G+ V FVTLHVGAGTF+PV V+D H MH+E G + A
Sbjct: 182 AAPTASLHFDEHLMDALTSRGVDVTFVTLHVGAGTFLPVTVDDVTTHKMHAEWGEVRATA 241
Query: 252 AQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMS 311
A +N+ K+ GGRI+ VGTT+LRL+E+A +DG I+P+ G T+IFI PGYR++ D LM+
Sbjct: 242 AAEINATKAAGGRIIPVGTTALRLIESAA-QDGTIHPFEGTTDIFIYPGYRWQITDALMT 300
Query: 312 NFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
NFHLPKSTLLMLVSA G + +Y HAI++ YRF+SYGD SLLF +
Sbjct: 301 NFHLPKSTLLMLVSALMGKDRMDAVYAHAIANQYRFFSYGDASLLFPSQ 349
>gi|94676614|ref|YP_589023.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Baumannia
cicadellinicola str. Hc (Homalodisca coagulata)]
gi|166216701|sp|Q1LSP1|QUEA_BAUCH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|94219764|gb|ABF13923.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Baumannia
cicadellinicola str. Hc (Homalodisca coagulata)]
Length = 353
Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats.
Identities = 133/363 (36%), Positives = 202/363 (55%), Gaps = 20/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP + IA P+ R + RL+ + + I ++ +D+ L+ D +V
Sbjct: 1 MHVADFSFNLPKNLIARYPLPERSTCRLLSLDGHSGA---IKHNVFTDILDQLSLGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK K +L
Sbjct: 58 FNNTRVIPARLFGRKIS-----GGKVEVLVERVLDNQRVLAHIRASKTPKIDTLLLLGDN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + LL ++ ++ G IPLP Y+ RP + D Y
Sbjct: 113 E---NIRAIIVARHQIWFELLFDDQR--DILTILNDAGHIPLPYYL--DRPDYSLDRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G++AAPTAGLHF LLS L G+++ F+TLHVG GTF P+KV+ + H M
Sbjct: 166 QTVYSQHPGAIAAPTAGLHFDQQLLSALRVKGVEMVFITLHVGTGTFQPIKVKKIEHHHM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-----TEDGIINPWSGFTNI 295
+SE + A+ + KSRG R+V+VGTTS+R LE+A ++ ++ P+ G T+I
Sbjct: 226 YSEYTEVPHTVVDAVIACKSRGNRVVAVGTTSVRSLESAIVSVSNSKHTMLAPFCGETSI 285
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGYRFR +D L++NFHLP+ST +MLVSAF G + T Y+ A++ AYRF SYGD
Sbjct: 286 FIYPGYRFRVIDALITNFHLPQSTPIMLVSAFAGYQHTFNAYREAVNLAYRFLSYGDAMF 345
Query: 356 LFQ 358
+
Sbjct: 346 ITN 348
>gi|220916512|ref|YP_002491816.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Anaeromyxobacter dehalogenans 2CP-1]
gi|254764262|sp|B8JH48|QUEA_ANAD2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|219954366|gb|ACL64750.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Anaeromyxobacter dehalogenans 2CP-1]
Length = 345
Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats.
Identities = 154/362 (42%), Positives = 206/362 (56%), Gaps = 20/362 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP +A PV PRD++RLMV+ P P +DLP L D +V
Sbjct: 1 MRLSDFDFALPEGLVAQAPVTPRDASRLMVLAPEEGSPA---HRGFADLPELLAPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN---SWSVYARPSKVIKKGDILHF 117
FN+T+VI A+L G + ++ L + W + SK I++G +L F
Sbjct: 58 FNDTRVIPARLLGHKAS-----GGKVELLLCEPLEGGLGRRWRAMGQASKPIREGAVLTF 112
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
LEA V D G + G ELE + G IPLPPYI +R DA D
Sbjct: 113 ------DGLEARVDDVEGEGFYRVTLDRQGPELEAALGRAGRIPLPPYI--RRAPDAEDA 164
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT +A+ GS AAPTAGLHFT LL+RL + GI+ VTLHVG GTF+P++ +D D
Sbjct: 165 ARYQTIWARAPGSAAAPTAGLHFTEPLLARLAARGIRRTAVTLHVGPGTFLPIRGDDLDL 224
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH E + A L + ++RGGRIV+VGTTS+R LE+A DG + G T +FI
Sbjct: 225 HRMHGERYEVSPAAAAELAATRARGGRIVAVGTTSVRTLESAWR-DGAVAAGPGRTELFI 283
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG+ F AVD +++NFHLP+STLL+LV AF G Y+ A++ YRF+SYGD LL
Sbjct: 284 RPGHPFHAVDAMVTNFHLPRSTLLVLVCAFGGQGRVLAAYREAVARGYRFFSYGDAMLLL 343
Query: 358 QK 359
++
Sbjct: 344 RR 345
>gi|189499978|ref|YP_001959448.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Chlorobium
phaeobacteroides BS1]
gi|189495419|gb|ACE03967.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Chlorobium
phaeobacteroides BS1]
Length = 346
Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats.
Identities = 123/359 (34%), Positives = 192/359 (53%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F F+LP +RIA RP R+ +LMV++ I SD+ ++ D +V
Sbjct: 1 MRLSNFRFNLPKTRIADRPEENREDCKLMVLNRRKKD---IDHKAFSDIVSYFKKGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
NN++V A++ G + + + +I L ++ W V P++ ++ G+ ++F
Sbjct: 58 LNNSRVFPAKIFGQK----EKTDAKIEVFLLRELNKEAGLWDVLVDPARKVRVGNKIYF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
Q + A V+D + + F I++ + +GT+PLPPY +RK D D
Sbjct: 113 ----QDDVVAEVVDNTTSRGRTIRFLNPEIDVFDLVEKIGTVPLPPYFSRK--PDDADRQ 166
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT YA G+V AP AGLHFT +L + G+K+ +TLH +F ++VED H
Sbjct: 167 DYQTVYASQTGAVVAPMAGLHFTMPILEEIKKKGVKILQITLHPSLSSFNAIEVEDVSKH 226
Query: 239 IMHSEIGFIDAPTAQALNSVK-SRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
M SE I TA +N K ++ GR+++VGTT+ R+LE T +G I G+T+ FI
Sbjct: 227 KMDSEYFNIPYQTAMEINETKLNKSGRVIAVGTTTCRVLEANATVEGKIKFGQGWTDKFI 286
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
P Y+F+ D L++NF P++TLLM+VSAF Y+ A+ YRF +YGD +
Sbjct: 287 YPPYQFKVTDGLIANFQQPETTLLMMVSAFAEYRLLMDAYKIALKKDYRFLAYGDAMFI 345
>gi|307728505|ref|YP_003905729.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Burkholderia sp. CCGE1003]
gi|307583040|gb|ADN56438.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Burkholderia sp. CCGE1003]
Length = 352
Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats.
Identities = 141/365 (38%), Positives = 198/365 (54%), Gaps = 22/365 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVH--PNLSCPLVISDHLVSDLPAFLNSNDA 58
+ + +FDFDLPP IA + R ++RL+ V P+ ++D S+LP +N+ D
Sbjct: 2 LTLSDFDFDLPPELIAQVALPERSASRLLEVDNAPDADRAARLTDRRFSELPECINAGDL 61
Query: 59 IVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
+VFN+TKV+ A+ G + +I + V + R SK + G +
Sbjct: 62 LVFNDTKVLKARFLGQKAS-----GGKIEVLVERLVGERTALAQIRASKSPQPGTTIRLA 116
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ TV ++ L + I G +PLPPYI D+ D
Sbjct: 117 DA-----FDVTVGERVEPFYTLHFP----ADCLTLIEQYGRLPLPPYIEHD--PDSTDET 165
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YA+ G+VAAPTAGLHF L RL + G++ +TLHVGAGTF PV+VE+ +H
Sbjct: 166 RYQTVYAQNPGAVAAPTAGLHFDDALFERLDARGVQRATLTLHVGAGTFQPVRVENLAEH 225
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSL----RLLETATTEDGIINPWSGFTN 294
MHSE + A + + ++RG R+++VGTTS+ A + S T+
Sbjct: 226 KMHSEWYHLPQSLADKIAATRARGNRVIAVGTTSMRALEAAARDAEAAGRPLAAASTETD 285
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFITPGYRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI YRF+SYGD
Sbjct: 286 IFITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIRAAYRHAIEQRYRFFSYGDAM 345
Query: 355 LLFQK 359
LL ++
Sbjct: 346 LLTRR 350
>gi|241767174|ref|ZP_04764931.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Acidovorax
delafieldii 2AN]
gi|241362214|gb|EER58268.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Acidovorax
delafieldii 2AN]
Length = 406
Score = 406 bits (1045), Expect = e-111, Method: Composition-based stats.
Identities = 145/378 (38%), Positives = 207/378 (54%), Gaps = 29/378 (7%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDF LPP+ IA P R ++RL+ L +D + +LP L + D +VF
Sbjct: 37 TLSDFDFALPPALIAQHPASERSASRLL-----DGRQLPPTDRIFRELPGLLRAGDLLVF 91
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWS----------VYARPSKVIKK 111
N+T+V+ A++ G + + E I L N+ + + SK
Sbjct: 92 NDTRVVKARIFGEKASG-GKLELLIERVLPAEARENAAGTAGGTGNEVVAHMKVSKKPLP 150
Query: 112 GDILHFFSQDGQSRLEATVIDKW-NTGEILLVFSISGIELE---RQISLVGTIPLPPYIA 167
G +H +AT++ +W L F++ G E + G +PLPPYI
Sbjct: 151 GSTVHMAGGRHAGGFDATLLSRWPTEDGPLFRFALHGPAGESPWELMERHGHLPLPPYIE 210
Query: 168 RK-----RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHV 222
R+ P A D YQT +A+ G+VAAPTA LHF ++L+ + + GI+ VTLHV
Sbjct: 211 RQQHTGNDPDAAEDSQRYQTVFARAPGAVAAPTAALHFDESVLAEMAARGIERASVTLHV 270
Query: 223 GAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE 282
GAGTF PVK E+ +H MHSE + T AL + RGGR+V+VGTT++R LE+
Sbjct: 271 GAGTFQPVKTENLAEHQMHSEWYEVPLATLAALERCRQRGGRVVAVGTTTVRTLESWARS 330
Query: 283 DGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAIS 342
SG T IFITPG+ F+ VD+L++NFHLPKSTL+MLVSAF G E +Y+HAI+
Sbjct: 331 G----QASGDTAIFITPGFAFQVVDVLLTNFHLPKSTLMMLVSAFAGYEHVMALYRHAIA 386
Query: 343 HAYRFYSYGDTSLLFQKR 360
YRF+SYGD LL +++
Sbjct: 387 QEYRFFSYGDAMLLERRK 404
>gi|91205719|ref|YP_538074.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
bellii RML369-C]
gi|122425478|sp|Q1RI29|QUEA_RICBR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|91069263|gb|ABE04985.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
bellii RML369-C]
Length = 353
Score = 406 bits (1045), Expect = e-111, Method: Composition-based stats.
Identities = 147/374 (39%), Positives = 218/374 (58%), Gaps = 37/374 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA P+ RD + L++ + ++ +L D +V
Sbjct: 1 MKLSDFDFDLPLELIAQNPISKRDESNLLI-----ASTQQYVKTKFYNIIDYLKEGDLLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS---------------WSVYARP 105
FNN+KVI A+L+ + I+ L+ R+ N WS +A+P
Sbjct: 56 FNNSKVIKAKLSLDKN---------ITINLNQRLKDNRRATNDDAGRLKSIDYWSAFAKP 106
Query: 106 SKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPY 165
++ +K GD +F + + +K GEI + F ++ I + + G +PLP Y
Sbjct: 107 ARKLKVGDEFYF------DNHKIIITEKLEMGEIKIKFELANISVFEFLDKYGEMPLPLY 160
Query: 166 IARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAG 225
I R D YQT Y+ IQGSVAAPTAGLHFT++++++L + G++V FVTLHVGAG
Sbjct: 161 IKRP-ERQKSDDERYQTVYSNIQGSVAAPTAGLHFTNDIINKLKAKGVQVAFVTLHVGAG 219
Query: 226 TFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI 285
TFMPVK E+ ++H MH+E I TA +N K RI++VGTTSLR LE+ + +G
Sbjct: 220 TFMPVKTENINEHKMHTEYCSITPETAAIINKAKKEKRRIIAVGTTSLRTLES-SGINGN 278
Query: 286 INPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAY 345
+N T+IFITPG++F+ VD+L++NFH PKSTL MLV AF G ++ ++Y++AI
Sbjct: 279 VNSGDFETDIFITPGFKFQIVDMLLTNFHFPKSTLFMLVCAFAGFKKMHELYKYAIEEQM 338
Query: 346 RFYSYGDTSLLFQK 359
RF+SYGD +LL++K
Sbjct: 339 RFFSYGDATLLYRK 352
>gi|323524790|ref|YP_004226943.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Burkholderia sp. CCGE1001]
gi|323381792|gb|ADX53883.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Burkholderia sp. CCGE1001]
Length = 352
Score = 406 bits (1045), Expect = e-111, Method: Composition-based stats.
Identities = 139/364 (38%), Positives = 195/364 (53%), Gaps = 22/364 (6%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVH--PNLSCPLVISDHLVSDLPAFLNSNDAI 59
+ +FDFDLPP IA + R ++RL+ V + + D S+LP ++ D +
Sbjct: 3 TLSDFDFDLPPELIAQVALPERSASRLLQVDNAADAERAARLVDRRFSELPDCISPGDLL 62
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFN+TKV+ A+ G + +I + + R SK + G +
Sbjct: 63 VFNDTKVLKARFLGQKAS-----GGKIEVLVERLTGERTALAQIRASKSPQPGTTIRLAD 117
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ TV ++ L + I G +PLPPYI DA D
Sbjct: 118 A-----FDVTVGERVEPFYTLHFP----ADCLTLIEQHGRLPLPPYIEHD--PDAVDETR 166
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ G+VAAPTAGLHF +L +RL + G++ +TLHVGAGTF PV+VE+ +H
Sbjct: 167 YQTVYAQNPGAVAAPTAGLHFDESLFARLDAHGVERATLTLHVGAGTFQPVRVENLAEHK 226
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSL----RLLETATTEDGIINPWSGFTNI 295
MHSE + A + + K+RG R+++VGTTS+ A + S T+I
Sbjct: 227 MHSEWYHLPQSLADKIAATKARGNRVIAVGTTSMRALEAAARDAEAAGRPLGAASTETDI 286
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGY+FR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI YRF+SYGD L
Sbjct: 287 FITPGYKFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIRAAYRHAIEQRYRFFSYGDAML 346
Query: 356 LFQK 359
L ++
Sbjct: 347 LTRR 350
>gi|154253493|ref|YP_001414317.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Parvibaculum lavamentivorans DS-1]
gi|171769669|sp|A7HXM7|QUEA_PARL1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|154157443|gb|ABS64660.1| Queuosine biosynthesis protein [Parvibaculum lavamentivorans DS-1]
Length = 350
Score = 406 bits (1045), Expect = e-111, Method: Composition-based stats.
Identities = 183/357 (51%), Positives = 232/357 (64%), Gaps = 10/357 (2%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDFDLP IALRP PRDSAR++V+ P ++D VSDLP+ L D +V
Sbjct: 1 MRVSDFDFDLPEELIALRPARPRDSARMLVIGP---AENALADKSVSDLPSHLREGDILV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI A+L G R I LH R S + W + RP+K + + + F
Sbjct: 58 FNDTKVIPARLFGTRRRG--EASARIEVMLHKRESADEWRAFLRPAKKLNLSETIDF--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A V +K GE L FS+SG L+ I+ G +PLPPYIARKR D D DY
Sbjct: 113 --PGGLSAAVEEKGEGGEAGLRFSLSGPALDAAIAAAGEMPLPPYIARKRAADDEDVADY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A G+VAAPTAGLHFT L++ + + G+ +TLHVGAGTF+PV EDTD H M
Sbjct: 171 QTLHADEPGAVAAPTAGLHFTPALMAAIEARGVSTVRLTLHVGAGTFLPVTAEDTDTHKM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G I A A+N +++GGRIV+VGTTSLRLLE+A E G ++P+ G T+IFITPG
Sbjct: 231 HAERGEITEAEAAAINEARAKGGRIVAVGTTSLRLLESAVDEAGTVHPFRGETDIFITPG 290
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YRFRAVD+LM+NFHLP+STL MLVSA EE K+ Y HA++ YRFYSYGD L++
Sbjct: 291 YRFRAVDVLMTNFHLPRSTLFMLVSALRSTEEMKRAYAHAVAEKYRFYSYGDACLIY 347
>gi|86158966|ref|YP_465751.1| queuosine biosynthesis protein [Anaeromyxobacter dehalogenans
2CP-C]
gi|123498575|sp|Q2IKY3|QUEA_ANADE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|85775477|gb|ABC82314.1| Queuosine biosynthesis protein [Anaeromyxobacter dehalogenans
2CP-C]
Length = 345
Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats.
Identities = 154/362 (42%), Positives = 207/362 (57%), Gaps = 20/362 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP +A PV PRD++RLMV+ P P +DLP L D +V
Sbjct: 1 MRLSDFDFALPEGLVAQAPVTPRDASRLMVLAPGEGAPA---HRGFADLPELLAPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN---SWSVYARPSKVIKKGDILHF 117
FN+T+VI A+L G + ++ L + W + SK I++G +L F
Sbjct: 58 FNDTRVIPARLLGHKAS-----GGKVELLLCEPLEGGLGRRWRAMGQASKPIREGAVLAF 112
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
LEA V G + G ELE + G IPLPPYI +R DA D
Sbjct: 113 ------DGLEARVDAVEGEGFYRVTLDRQGAELEAALGRAGRIPLPPYI--RRAPDAEDA 164
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT +A+ GS AAPTAGLHFT LL+RL + G++ VTLHVG GTF+P++ +D D
Sbjct: 165 ARYQTIWARAPGSAAAPTAGLHFTEPLLARLAARGVRRTAVTLHVGPGTFLPIRGDDLDA 224
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH E + A L + ++RGGRIV+VGTTS+R LE+A DG + P G T +FI
Sbjct: 225 HRMHGERYEVSPAAAAELAAARARGGRIVAVGTTSVRTLESAWR-DGEVAPGPGRTELFI 283
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG+ FRAVD +++NFHLP+STLL+LV AF G Y+ A++ YRF+SYGD LL
Sbjct: 284 RPGHPFRAVDAMVTNFHLPRSTLLVLVCAFGGQGRVLAAYREAVARGYRFFSYGDAMLLL 343
Query: 358 QK 359
++
Sbjct: 344 RR 345
>gi|170746470|ref|YP_001752730.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Methylobacterium radiotolerans JCM 2831]
gi|238688890|sp|B1M584|QUEA_METRJ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|170652992|gb|ACB22047.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Methylobacterium radiotolerans JCM 2831]
Length = 354
Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats.
Identities = 198/358 (55%), Positives = 247/358 (68%), Gaps = 11/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDF+LP + IALRP PRD+ R++VV P + D V DLP L + DA+V
Sbjct: 1 MRVDLFDFELPETSIALRPAEPRDAGRMLVVRPG----APLVDRTVRDLPDALRAGDALV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+LNGVR + LH+R +P+ W +ARP+K + GD L F
Sbjct: 57 FNDTRVIPARLNGVR-TRPGAPGQRTEVMLHLREAPDRWRAFARPAKRLTAGDALRFGD- 114
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L ATV++K GEI+L F +G EL+ I+ G +PLPPYIA KR DARD DY
Sbjct: 115 -----LTATVLEKAEAGEIVLAFDRAGPELDAAIAAEGALPLPPYIAGKRATDARDATDY 169
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF+ LL+ L + G++ + VTLHVGAGTF+PVK EDTD H M
Sbjct: 170 QTVYARNPGAVAAPTAGLHFSDALLADLDAAGLQRHHVTLHVGAGTFLPVKAEDTDGHRM 229
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+EIG +DA TA ALN+ ++ GGRIV+VGTT+LRLLE+A DG + P+SG T IFITPG
Sbjct: 230 HAEIGILDAATADALNAARAAGGRIVAVGTTALRLLESAARPDGTLAPFSGPTEIFITPG 289
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRFRAVD L++NFHLP+STL MLVSAF G+E + Y HAI YRFYSYGD SLLF
Sbjct: 290 YRFRAVDALVTNFHLPRSTLFMLVSAFSGLETMRAAYAHAIGAGYRFYSYGDASLLFP 347
>gi|329905131|ref|ZP_08274050.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Oxalobacteraceae bacterium IMCC9480]
gi|327547691|gb|EGF32476.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Oxalobacteraceae bacterium IMCC9480]
Length = 341
Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats.
Identities = 142/355 (40%), Positives = 194/355 (54%), Gaps = 22/355 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDFDLP S IA P+ R ++RL+ + + D +D+ A L D +VFN
Sbjct: 4 LSDFDFDLPQSLIAQHPLAERSASRLLQLDGDTPV-----DRQFADIVALLTPGDLLVFN 58
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+V+ A+ G + + ++ + + + R SK G I+
Sbjct: 59 DTRVLKARFFGNK-----QSGGKVEVLIERVLDARTVHAQIRSSKSPVAGSIVRLSDA-- 111
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ TV + L S ++ I G +PLPPYI DA D YQT
Sbjct: 112 ---FDVTVGARAGEFFTLTFPS----DVFELIETYGRLPLPPYIDH--TADAFDETRYQT 162
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ G+VAAPTAGLHF LL +L GI+ FVTLHVGAGTF PV+ E +H MHS
Sbjct: 163 VYARTPGAVAAPTAGLHFDQALLDKLTEHGIRFAFVTLHVGAGTFQPVRTEVLAEHAMHS 222
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E + A T A+ + ++ G +V+VGTTSLR LE+A ++ G + S T +FITPGYR
Sbjct: 223 EWYTLPAATVDAVRTTRAAGRDVVAVGTTSLRALESA-SQSGELVAGSADTRLFITPGYR 281
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+ V L++NFHLPKSTLLMLVSAF G + Y HAI+ YRF+SYGD L
Sbjct: 282 FKTVTRLITNFHLPKSTLLMLVSAFAGYPAIRAAYAHAIAQQYRFFSYGDAMFLT 336
>gi|28895709|ref|NP_802059.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes SSI-1]
gi|28810958|dbj|BAC63892.1| putative S-adenosylmethionine-tRNA ribosyltransferase-isomerase
[Streptococcus pyogenes SSI-1]
Length = 305
Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats.
Identities = 140/315 (44%), Positives = 191/315 (60%), Gaps = 14/315 (4%)
Query: 43 DHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVY 102
D + LN DA+V NNT+V+ A+L G + + L + W V
Sbjct: 3 DSHFDHIIDQLNPGDALVMNNTRVLPARLYGEK----PDTHGHVELLLLKNTQGDQWEVL 58
Query: 103 ARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPL 162
A+P+K +K G ++F G L+AT+ID+ G ++ FS GI LE + +G +PL
Sbjct: 59 AKPAKRLKVGSQVNF----GDGHLKATIIDELEHGGRIVEFSYDGIFLE-VLESLGEMPL 113
Query: 163 PPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHV 222
PPYI K D YQT YAK GS AAPTAGLHFT++LL ++ + G+ + ++TLHV
Sbjct: 114 PPYIHEK----LEDAERYQTVYAKENGSAAAPTAGLHFTTDLLKKIEAKGVHLVYLTLHV 169
Query: 223 GAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE 282
G GTF PV V++ D+H MHSE + AQ L VK GGR+V+VGTTS+R LET ++
Sbjct: 170 GLGTFRPVSVDNLDEHDMHSEFYSLSEEAAQTLRDVKQAGGRVVAVGTTSIRTLETIGSK 229
Query: 283 -DGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAI 341
G I SG+TNIFI PGY+F+ VD +NFHLPKSTL+MLVSAF G + + Y+HA+
Sbjct: 230 FQGDIQADSGWTNIFIKPGYQFKVVDAFSTNFHLPKSTLVMLVSAFAGRDFVLEAYRHAV 289
Query: 342 SHAYRFYSYGDTSLL 356
YRF+S+GD +
Sbjct: 290 DEKYRFFSFGDAMFV 304
>gi|193212984|ref|YP_001998937.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Chlorobaculum parvum NCIB 8327]
gi|193086461|gb|ACF11737.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Chlorobaculum parvum NCIB 8327]
Length = 346
Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats.
Identities = 120/359 (33%), Positives = 191/359 (53%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F + LP +RIA P PRD+ +LMV++ I + +D+ ++ D +V
Sbjct: 1 MRLSNFRYTLPKTRIADHPESPRDACKLMVLNRRKKD---IEHKVFTDIVSYFKKGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
NN++V A++ G + + + +I L ++ W V P++ ++ G+ ++F
Sbjct: 58 VNNSRVFPAKIFGQK----EKTDAKIEVFLLRELNKEAGLWDVLVDPARKVRVGNKIYF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ + A V+D + + F I++ + + +G +PLPPY RK D
Sbjct: 113 ----EDDVVAEVVDNTTSRGRTIRFLNPDIDVFKMVEKIGQVPLPPYFTRK--PKDSDRT 166
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT YA G+V AP GLHFT LL ++ +G+K+ +TLH TF ++VED H
Sbjct: 167 DYQTVYASQTGAVVAPMGGLHFTMPLLEQIQKVGVKILPITLHPSLSTFNAIEVEDVSKH 226
Query: 239 IMHSEIGFIDAPTAQALNSVK-SRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
M SE I TA +N K ++ GR+ VGTT+ R LE T +G I G+T+ FI
Sbjct: 227 KMDSEYFNIPYQTAMEINETKVNKSGRVFVVGTTTCRALEANATVEGKIKFGQGWTDKFI 286
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
P Y F+ D L++NF P++TL+M+VSAF Y+ A+ + YRF +YGD+ L+
Sbjct: 287 YPPYNFKVTDALITNFQQPETTLMMVVSAFAEHRLLMDAYKTALKNNYRFLAYGDSMLI 345
>gi|189347014|ref|YP_001943543.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Chlorobium
limicola DSM 245]
gi|189341161|gb|ACD90564.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Chlorobium
limicola DSM 245]
Length = 346
Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats.
Identities = 122/359 (33%), Positives = 190/359 (52%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F + LP ++IA PV PRDS +LMV++ I + D+ ++ D +V
Sbjct: 1 MRLSNFRYTLPKTKIADHPVSPRDSCKLMVLNRRK---KEIEHKVFEDIVSYFKKGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
NN++V A++ G + + + +I L ++ W V P++ ++ G+ ++F
Sbjct: 58 VNNSRVFPAKIFGQK----EKTDAKIEVFLLRVLNKEAGLWDVLVDPARKVRVGNKIYF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ A V+D + + F I++ + +G +PLPPY RK D
Sbjct: 113 ----DEDVVAEVVDNTTSRGRTIRFLNPEIDVFSLVERIGHVPLPPYFTRK--PKETDKE 166
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
+YQT YA G+V AP AGLHFT LL ++ IG+K+ +TLH TF ++VED H
Sbjct: 167 NYQTVYASQTGAVVAPMAGLHFTMPLLQKIQKIGVKILPITLHPSLSTFNAIEVEDVSKH 226
Query: 239 IMHSEIGFIDAPTAQALNSVKSRG-GRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
M SE I TA +N K GR+++VGTT+ R+LE T DG I G+T+ FI
Sbjct: 227 KMDSEYFNIPYQTAMEINETKINKTGRVIAVGTTTCRVLEANATVDGKIKFGRGWTDKFI 286
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
P Y+F+ D L++NF P++TLLM+VSAF + Y+ A+ Y+F +YGD +
Sbjct: 287 YPPYQFKVTDALLTNFQQPETTLLMVVSAFAEHRLLMEAYKTAMKSDYQFLAYGDAMFI 345
>gi|221639392|ref|YP_002525654.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhodobacter
sphaeroides KD131]
gi|254764285|sp|B9KT07|QUEA_RHOSK RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|221160173|gb|ACM01153.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhodobacter
sphaeroides KD131]
Length = 346
Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats.
Identities = 164/358 (45%), Positives = 210/358 (58%), Gaps = 14/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RP PR +ARL++ + I D V DL D +V
Sbjct: 1 MQLSDFDFDLPERLIATRPARPRTAARLLLAEGDR-----IEDRHVRDLVGIFRPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G R E I TL + W A+P + +K G+ + F
Sbjct: 56 LNNTRVIPARLTGTRTRG--EAEARIEVTLMEPAAAGGWRAMAKPLRKLKPGETIRFSDA 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A V +K T L+ +G + ++ G +PLPPYIA +R DA+D DY
Sbjct: 114 -----LSAEVAEKGETDLRLVF-DRAGAAFDAALADAGAMPLPPYIAARRAPDAQDDEDY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTA LHF LL L + G+ VTLHVGAGTF+PVKVED H M
Sbjct: 168 QTVFARHAGAVAAPTASLHFDRPLLEALAARGVGFTEVTLHVGAGTFLPVKVEDVTTHRM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G + A + + K+ GGR++ VGTT+LRL+E+A G I PW G T+IFI PG
Sbjct: 228 HAEWGEVTEAAAAEIAATKAAGGRVIPVGTTALRLIESAAAS-GAIRPWRGETDIFIYPG 286
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRFR D LM+NFHLPKSTLLMLVSA G E + +Y HA+ H YRF+SYGD SLL
Sbjct: 287 YRFRVTDALMTNFHLPKSTLLMLVSALMGQERIRAIYDHAVRHDYRFFSYGDASLLIP 344
>gi|296122043|ref|YP_003629821.1| S-adenosylmethionine/tRNA-ribosyltransferase-isom erase
[Planctomyces limnophilus DSM 3776]
gi|296014383|gb|ADG67622.1| S-adenosylmethionine/tRNA-ribosyltransferase-isom erase
[Planctomyces limnophilus DSM 3776]
Length = 364
Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats.
Identities = 138/364 (37%), Positives = 197/364 (54%), Gaps = 18/364 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +D++LPP IA P+ RD++R++V+H + +I + +LP FL +D IV N
Sbjct: 10 LSTYDYELPPELIAQHPLPERDASRMLVIHRSTG---MIEHRFIKELPLFLKPHDLIVVN 66
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF----- 117
N+KV+ A+L GVR + + W + + + G+ +
Sbjct: 67 NSKVVPARLQGVRAS----TGGKWEGLFLGVTTSGEWQIIGQTRGRLVAGEWITIPVPAT 122
Query: 118 ----FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
+ S L+ +I++ G I S I + G++PLPPYI R +
Sbjct: 123 HIENAASRQNSDLQLQLIERGE-GGIWKASPQSEISTWDLLEQYGSMPLPPYIHRDDE-E 180
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
A D V YQT ++ QGSVAAPTAGLHFT L R + G K VTLHVG GTF PV E
Sbjct: 181 AEDRVRYQTIFSGPQGSVAAPTAGLHFTPALRDRCAASGAKFAEVTLHVGMGTFRPVSSE 240
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
+H MH+E + AQ + S KS GGR++++GTTS R LE+A + G+ PW G T
Sbjct: 241 RIAEHQMHTETCELSEDVAQKIRSTKSEGGRVLAIGTTSARTLESAARKVGVGLPWQGET 300
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
N+F+ P F V+ L++NFH+PKSTLLMLV A G + T + Y+ A+ YRF SYGD
Sbjct: 301 NLFLRPPCEFLQVEALLTNFHVPKSTLLMLVCAMAGYDLTMQAYKEAVEQRYRFLSYGDC 360
Query: 354 SLLF 357
L+
Sbjct: 361 MLIL 364
>gi|157826819|ref|YP_001495883.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
bellii OSU 85-389]
gi|166216747|sp|A8GVG9|QUEA_RICB8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|157802123|gb|ABV78846.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
bellii OSU 85-389]
Length = 353
Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats.
Identities = 148/374 (39%), Positives = 218/374 (58%), Gaps = 37/374 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA P+ RD + L++ + ++ +L D +V
Sbjct: 1 MKLSDFDFDLPLELIAQNPISKRDESNLLI-----ASTQQYVKTKFYNIIDYLKEGDLLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS---------------WSVYARP 105
FNN+KVI A+L+ + I+ L+ R+ N WS +A+P
Sbjct: 56 FNNSKVIKAKLSLDKN---------ITINLNQRLKDNRRATNDDAGRLKSIDYWSAFAKP 106
Query: 106 SKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPY 165
++ +K GD +F + + +K GEI + F ++ I + + G +PLP Y
Sbjct: 107 ARKLKVGDEFYF------DNHKIIITEKLEMGEIKIKFELANISVFEFLDKYGEMPLPLY 160
Query: 166 IARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAG 225
I R D YQT Y+ IQGSVAAPTAGLHFT++++++L + G++V FVTLHVGAG
Sbjct: 161 IKRP-ERQKSDDERYQTVYSNIQGSVAAPTAGLHFTNDIINKLKAKGVQVAFVTLHVGAG 219
Query: 226 TFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI 285
TFMPVK E+ ++H MH+E I TA +N K RI++VGTTSLR LE+ + +G
Sbjct: 220 TFMPVKTENINEHKMHTEYCSITPETAAIINKAKKEKRRIIAVGTTSLRTLES-SGINGN 278
Query: 286 INPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAY 345
+N T+IFITPG++F+ VD+L++NFH PKSTL MLV AF G +E ++Y++AI
Sbjct: 279 VNSGDFETDIFITPGFKFQIVDMLLTNFHFPKSTLFMLVCAFAGFKEMHELYKYAIEEQM 338
Query: 346 RFYSYGDTSLLFQK 359
RF+SYGD +LL++K
Sbjct: 339 RFFSYGDATLLYKK 352
>gi|194334270|ref|YP_002016130.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Prosthecochloris aestuarii DSM 271]
gi|194312088|gb|ACF46483.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Prosthecochloris aestuarii DSM 271]
Length = 346
Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats.
Identities = 127/359 (35%), Positives = 195/359 (54%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F + LP ++IA RPV PRDS++LMV++ I D+ +F D ++
Sbjct: 1 MRLSNFRYSLPKTKIADRPVSPRDSSKLMVLNRRK---KEIEHKTFGDIVSFFKKGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
NN++V A++ G + + + +I L ++ W V P++ ++ G+ ++F
Sbjct: 58 LNNSRVFPAKIFGQK----EKTDAKIEVFLLRELNKEAGLWDVLVDPARKVRVGNKIYF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
Q + A V+D + + F I++ + +GT+PLPPY +RK DA D
Sbjct: 113 ----QDDVVAEVVDNTTSRGRTIRFLNPEIDVFDLVEKIGTVPLPPYFSRK--PDAGDRE 166
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT YA G+V AP AGLHFT LL + G+K+ +TLH +F ++VED H
Sbjct: 167 DYQTVYASQTGAVVAPMAGLHFTMPLLEAIKKKGVKILPITLHPSLSSFNAIEVEDVSKH 226
Query: 239 IMHSEIGFIDAPTAQALNSVK-SRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
M SE I TA +N K ++ GRI++VGTT+ R+LE T +G I G+T+ FI
Sbjct: 227 KMDSEYFNIPYQTAMEVNETKLNKSGRIIAVGTTTCRVLEANATVEGKIKFGQGWTDKFI 286
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
P Y+F+ D L++NF P++TLLM+VSAF Y+ A+ YRF +YGD +
Sbjct: 287 YPPYQFKVTDALVANFQQPETTLLMMVSAFAEHRFLMDSYKTAMKENYRFLAYGDAMFI 345
>gi|254468638|ref|ZP_05082044.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [beta
proteobacterium KB13]
gi|207087448|gb|EDZ64731.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [beta
proteobacterium KB13]
Length = 347
Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats.
Identities = 135/359 (37%), Positives = 192/359 (53%), Gaps = 21/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++EF++ LP IA P R +RL+ ++PN I D+ ++ + +N ND +V
Sbjct: 1 MNIEEFNYTLPEELIAQHPTDERSDSRLLQLNPNT---EEIIDNNFTNFLSLINQNDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI A+++G + + ++ + ++ NS+ + SK I G +
Sbjct: 58 FNDTKVIKARIHGHK-----KSGGKVEVLIEKIINQNSFVGHIGTSKKINAGLEI----- 107
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ TV D+ I+ ++ I G +PLPPYI R + D Y
Sbjct: 108 -MVGNFKLTVKDRDENMFIIETND----DIFNIIDCHGKLPLPPYINRD--NEDFDDDRY 160
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +AK G++AAPTAGLHF L F+TLHVG+GTF PV+ + DH M
Sbjct: 161 QTVFAKHDGAIAAPTAGLHFDDQFFLELSKQNFNFSFITLHVGSGTFQPVRNSNITDHKM 220
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I + K GGRI+++GTT LR LE+A + + + TNIFI PG
Sbjct: 221 HSEEFMISQDVYDRIEQTKKNGGRIIAIGTTVLRALESAFAQPKKDSNFQ-KTNIFIYPG 279
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
Y+F+ VD L +NFHLPKSTL+MLVSAF G T Y HA+ YRF+SYGD + QK
Sbjct: 280 YQFKIVDSLFTNFHLPKSTLIMLVSAFAGHSFTMTAYAHAVKEKYRFFSYGDAMFIEQK 338
>gi|319796412|ref|YP_004158052.1| s-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Variovorax
paradoxus EPS]
gi|315598875|gb|ADU39941.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Variovorax
paradoxus EPS]
Length = 347
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 135/359 (37%), Positives = 195/359 (54%), Gaps = 17/359 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDFDLPP +A P R S+RL+ D + DLP+ L D +VF
Sbjct: 5 TLSDFDFDLPPELVAQHPASERTSSRLL-----DGTGDAPVDRIFKDLPSLLREGDLLVF 59
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L G + ++ + + + + SK G L
Sbjct: 60 NDTRVVKARLFGEKP-----TGGKLELLVERVLQGQEVVAHMKVSKKPPVGTTLEMVGGF 114
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
++ L ++ S +G + G +PLPPYI +D D YQ
Sbjct: 115 -RATLLGRWPEEDGALFRFAFESDAGENPYMLMERCGHVPLPPYITHTDSVD--DESRYQ 171
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A++ G+VAAPTA LHF LL+ L + G++ VTLHVGAGTF PVK E+ +H MH
Sbjct: 172 TVFARVPGAVAAPTAALHFDEGLLAALEARGVQRANVTLHVGAGTFQPVKTENIAEHTMH 231
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
+E + T +A+ K+RGGR+++VGTT++R LE+ +G T IFITPG+
Sbjct: 232 AERYEVPEATRRAIAECKARGGRVIAVGTTTVRTLESWAKSG----EATGDTRIFITPGF 287
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
F VD+L++NFHLPKSTL+MLVSAF G E +Y +AI+H YRF+SYGD LL + +
Sbjct: 288 AFAHVDVLVTNFHLPKSTLMMLVSAFAGYERVMALYANAIAHQYRFFSYGDAMLLARTQ 346
>gi|77463529|ref|YP_353033.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhodobacter
sphaeroides 2.4.1]
gi|91207401|sp|Q3J252|QUEA_RHOS4 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|77387947|gb|ABA79132.1| S-adenosylmethionine tRNA ribosyltransferase-isomerase [Rhodobacter
sphaeroides 2.4.1]
Length = 346
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 162/358 (45%), Positives = 209/358 (58%), Gaps = 14/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RP PR +ARL++ + I D V DL D +V
Sbjct: 1 MQLSDFDFDLPERLIATRPARPRTAARLLLAEGDR-----IEDRHVRDLVGIFRPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G R E + TL + W A+P + +K G+ + F
Sbjct: 56 LNNTRVIPARLTGTRTRG--EAEARVEVTLMEPAAAGGWRAMAKPLRKLKPGETIRFSDA 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A V +K T L+ +G + ++ G +PLPPYIA +R D +D DY
Sbjct: 114 -----LSAEVAEKGETDLRLVF-DRAGAAFDAALAEAGAMPLPPYIAARRAPDTQDDEDY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTA LHF LL L + G+ VTLHVGAGTF+PVKVED H M
Sbjct: 168 QTVFARHAGAVAAPTASLHFDRPLLEALAARGVGFTEVTLHVGAGTFLPVKVEDVTTHRM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G + A + + K+ GGR++ VGTT+LRL+E+A G I PW G T+IFI PG
Sbjct: 228 HAEWGEVTETAAAEIAATKAAGGRVIPVGTTALRLIESAAAS-GAIRPWRGETDIFIYPG 286
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRFR D LM+NFHLPKSTLLMLVSA G E + +Y HA+ H YRF+SYGD SLL
Sbjct: 287 YRFRVTDALMTNFHLPKSTLLMLVSALMGQERIRAIYDHAVRHDYRFFSYGDASLLIP 344
>gi|146329296|ref|YP_001208964.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase
[Dichelobacter nodosus VCS1703A]
gi|166216719|sp|A5EWY6|QUEA_DICNV RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|146232766|gb|ABQ13744.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase
[Dichelobacter nodosus VCS1703A]
Length = 354
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 134/356 (37%), Positives = 206/356 (57%), Gaps = 17/356 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +F ++LP IA P+ R +RL+V + + IS+ + D FL D +V
Sbjct: 5 LKKSDFFYELPEHLIARYPLQNRSDSRLLVAAVESAQKVHISNKQMIDFIDFLKPEDLLV 64
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A++ G + ++ + +S + R SK G + +Q
Sbjct: 65 INNTRVVPARMFGHKIS-----GGKVEVFIERLLSEQRVKAHIRASKAPLLGSQIVIGAQ 119
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ T+ DK + + S + + ++ G +P+PPY+AR +A D Y
Sbjct: 120 ------KVTIEDKKDGIYTVF----SEMPWTKLMAQQGKMPIPPYLARD--AEALDSERY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+I G+VAAPTAGLHF LL R+ + G+K +TLHVGAGTF PV+VE+ ++H+M
Sbjct: 168 QTVYAQIAGAVAAPTAGLHFDQKLLERIAAKGVKRAAITLHVGAGTFQPVRVENLNEHVM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A+ + +++ GR++++GTT+LR LE+A G + + G T++FITPG
Sbjct: 228 HQEWFSLSQEVVDAVAACRAQNGRVIAIGTTALRALESAAIGSGKVGVFQGDTDLFITPG 287
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+ VD L +NFHLP+STLLMLVSAF G+ +++YQHAI+ YRF+SYGD L
Sbjct: 288 YEFQVVDALFTNFHLPESTLLMLVSAFAGVNNIRRIYQHAITEQYRFFSYGDAMFL 343
>gi|126462385|ref|YP_001043499.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhodobacter
sphaeroides ATCC 17029]
gi|166216744|sp|A3PK61|QUEA_RHOS1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|126104049|gb|ABN76727.1| Queuosine biosynthesis protein [Rhodobacter sphaeroides ATCC 17029]
Length = 346
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 162/358 (45%), Positives = 209/358 (58%), Gaps = 14/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA RP PR +ARL++ + I D V DL D +V
Sbjct: 1 MQLSDFDFDLPERLIATRPARPRTAARLLLAEGDR-----IEDRHVRDLVGIFRPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L G R E + TL + W A+P + +K G+ + F
Sbjct: 56 LNNTRVIPARLTGTRTRG--EAEARVEVTLMEPAAAGGWRAMAKPLRKLKPGETIRFSDA 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A V +K T L+ +G + ++ G +PLPPYIA +R DA+D DY
Sbjct: 114 -----LSAEVAEKGETDLRLVF-DRAGAAFDAALAEAGAMPLPPYIAARRAPDAQDDEDY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTA LHF LL L + + VTLHVGAGTF+PVKVED H M
Sbjct: 168 QTVFARHAGAVAAPTASLHFDRPLLEALAARSVGFTEVTLHVGAGTFLPVKVEDVTTHRM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G + A + + K+ GGR++ VGTT+LRL+E+A G I PW G T+IFI PG
Sbjct: 228 HAEWGEVTEAAAAEIAATKAAGGRVIPVGTTALRLIESAAAS-GAIRPWRGETDIFIYPG 286
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YRFR D LM+NFHLPKSTLLMLVSA G E + +Y HA+ H YRF+SYGD SLL
Sbjct: 287 YRFRVTDALMTNFHLPKSTLLMLVSALMGQERIRAIYDHAVRHDYRFFSYGDASLLIP 344
>gi|187922704|ref|YP_001894346.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia phytofirmans PsJN]
gi|238689571|sp|B2SX83|QUEA_BURPP RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|187713898|gb|ACD15122.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Burkholderia phytofirmans PsJN]
Length = 352
Score = 405 bits (1040), Expect = e-111, Method: Composition-based stats.
Identities = 137/365 (37%), Positives = 195/365 (53%), Gaps = 22/365 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSC--PLVISDHLVSDLPAFLNSNDA 58
+ + +FDFDLPP IA + R ++RL+ V P + D ++LP + D
Sbjct: 2 LTLSDFDFDLPPELIAQVALPERSASRLLEVDNPAGAAGPARLIDRRFAELPECIAPGDL 61
Query: 59 IVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
+VFN+TKV+ A+ G + +I + + R SK + G +
Sbjct: 62 LVFNDTKVLKARFLGQKAS-----GGKIEVLVERLTGERTALAQIRASKSPQPGTTIRLA 116
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ TV ++ L + I G +PLPPYI D+ D
Sbjct: 117 DA-----FDVTVGERVEPFYTLHFPD----DCLTLIEQFGRLPLPPYIEHD--PDSTDET 165
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT +A+ G+VAAPTAGLHF LL+RL G++ +TLHVGAGTF PV+VE+ +H
Sbjct: 166 RYQTVFAQNPGAVAAPTAGLHFDDALLARLDEKGVERATLTLHVGAGTFQPVRVENLAEH 225
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSL----RLLETATTEDGIINPWSGFTN 294
MHSE + A + + ++RG R+++VGTTS+ A + S T+
Sbjct: 226 KMHSEWYHLPQALADKIAATRARGNRVIAVGTTSMRALEAAARDAEAAGRPLAAASTETD 285
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFITPGY+FR VD L++NFHLPKSTLLMLVSAF G+E ++ Y+HAI YRF+SYGD
Sbjct: 286 IFITPGYKFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIRETYRHAIEQRYRFFSYGDAM 345
Query: 355 LLFQK 359
LL ++
Sbjct: 346 LLTRR 350
>gi|332108485|gb|EGJ09709.1| putative queuosine S-adenosylmethionine:tRNA
ribosyltransferase-isomerase [Rubrivivax benzoatilyticus
JA2]
Length = 344
Score = 405 bits (1040), Expect = e-111, Method: Composition-based stats.
Identities = 138/357 (38%), Positives = 199/357 (55%), Gaps = 19/357 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF LPP IA P R ++RL+ + D + +LP L D +VFN
Sbjct: 6 LSDFDFPLPPELIAQHPAPERSASRLL-----DGRGALPVDRVFRELPQLLAPGDLLVFN 60
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+VI A+L+G + + + + + + R SK + G + F
Sbjct: 61 DTRVIKARLHGEKP-----TGGSVEALVERVLGGHEVLAHLRASKSPRPGTTVRFADA-- 113
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+A V+ + L + + G +PLPPYI + + D YQT
Sbjct: 114 ---FDAEVLGRDGVDGSLFHLRLPDDPF-VLLERHGHVPLPPYITHEDAAE--DVERYQT 167
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
+A G+VAAPTA LHF + +L+ L + G+K VTLHVGAGTF PV+ E+ D+H MH
Sbjct: 168 VFAARPGAVAAPTASLHFDAGVLAALDARGVKRAAVTLHVGAGTFQPVRAENLDEHRMHR 227
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E +DA T +A+ ++RGGRIV+ GTT+LR LE+A G + +G T++FI PG+
Sbjct: 228 ERWEVDAATVEAIRETRARGGRIVAAGTTTLRALESAA-IGGALEAGAGDTDLFIRPGFE 286
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
FR VD+L++NFHLPKSTLLMLVSAF G E +Y+HA+ YRF+SYGD LL ++
Sbjct: 287 FRVVDLLVTNFHLPKSTLLMLVSAFTGFEHMHALYRHAVEARYRFFSYGDAMLLERR 343
>gi|120609290|ref|YP_968968.1| queuosine biosynthesis protein [Acidovorax citrulli AAC00-1]
gi|120587754|gb|ABM31194.1| Queuosine biosynthesis protein [Acidovorax citrulli AAC00-1]
Length = 369
Score = 405 bits (1040), Expect = e-111, Method: Composition-based stats.
Identities = 141/373 (37%), Positives = 199/373 (53%), Gaps = 29/373 (7%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDF LPP IA P R ++RL+ V D + +LP L D +VF
Sbjct: 11 TLSDFDFSLPPELIAQHPAPERSASRLL-----DGRADVPVDRIFRELPGLLQPGDLLVF 65
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRV------SPNSWSVYARPSKVIKKGDIL 115
N+T+V+ A++ G + ++ + + + N + + SK G +L
Sbjct: 66 NDTRVVKARVFGEKAS-----GGKVELLIERVLVGTGGEAGNEVVAHMKVSKKPAVGAML 120
Query: 116 HFFSQDGQSRLEATVIDKWNTGE----ILLVFSISGIELERQISLVGTIPLPPYIARK-- 169
H AT++ +W + + S G + G IPLPPYI R
Sbjct: 121 HMAGGPAGGGFGATLLGRWPDEDGPLFRFALSSPDGAGPHALMERHGHIPLPPYIERHQE 180
Query: 170 ---RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGT 226
P A D YQT +A+ G+VAAPTA LHF +L+ L + G++ VTLHVGAGT
Sbjct: 181 GGGDPDAAEDAERYQTVFARAPGAVAAPTAALHFDEGVLASLAARGVERASVTLHVGAGT 240
Query: 227 FMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII 286
F PVK E DH MHSE + T AL + RGGR+V+VGTT++R LE+
Sbjct: 241 FQPVKTESLADHRMHSEWYEVPLATLAALERCRQRGGRVVAVGTTTVRTLESWARSG--- 297
Query: 287 NPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYR 346
+G T+IFITPG+ F+ VD+L++NFHLPKSTL+ML+SAF G E +Y+HAI+ YR
Sbjct: 298 -QGTGDTDIFITPGFAFQVVDLLVTNFHLPKSTLMMLISAFTGYEHAMDLYRHAIAQRYR 356
Query: 347 FYSYGDTSLLFQK 359
F+SYGD LL ++
Sbjct: 357 FFSYGDAMLLARR 369
>gi|21674139|ref|NP_662204.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Chlorobium
tepidum TLS]
gi|21647298|gb|AAM72546.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Chlorobium
tepidum TLS]
Length = 346
Score = 405 bits (1040), Expect = e-111, Method: Composition-based stats.
Identities = 123/359 (34%), Positives = 191/359 (53%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F + LP +RIA PRD+ +LMV++ I + +D+ ++ D +V
Sbjct: 1 MRLSNFRYTLPKTRIADHLESPRDACKLMVLNRRK---KEIEHKVFTDIVSYFKKGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
NN++V A++ G + + + +I L ++ W V P++ ++ G+ ++F
Sbjct: 58 VNNSRVFPAKIFGQK----EKTDAKIEVFLLRELNKEAGLWDVLVDPARKVRVGNKIYF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ + A V+D + + F I++ + + +G +PLPPY RK D
Sbjct: 113 ----EDDVVAEVVDNTTSRGRTIRFLNPDIDVFQMVEKIGHVPLPPYFTRK--PKETDRT 166
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT YA G+V AP AGLHFT LL +L IG+K+ +TLH TF ++VED H
Sbjct: 167 DYQTVYASQTGAVVAPMAGLHFTIPLLQQLQKIGVKILPLTLHPSLSTFNAIEVEDVSKH 226
Query: 239 IMHSEIGFIDAPTAQALNSVK-SRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
M SE I TA +N K ++ GR+ VGTT+ R LE T DG I G+T+ FI
Sbjct: 227 KMDSEYFNIPYQTAMEINETKVNKSGRVFVVGTTTCRALEANATVDGKIKFGQGWTDKFI 286
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
P Y F+ D L++NF P++TL+M+VSAF + Y+ A+ + YRF +YGD L+
Sbjct: 287 YPPYNFKVTDALITNFQQPETTLMMVVSAFAEHRLLMEAYKTALKNNYRFLAYGDAMLI 345
>gi|288818534|ref|YP_003432882.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase/queuine
synthetase [Hydrogenobacter thermophilus TK-6]
gi|288787934|dbj|BAI69681.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase/queuine
synthetase [Hydrogenobacter thermophilus TK-6]
gi|308752124|gb|ADO45607.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Hydrogenobacter thermophilus TK-6]
Length = 334
Score = 405 bits (1040), Expect = e-111, Method: Composition-based stats.
Identities = 136/357 (38%), Positives = 197/357 (55%), Gaps = 23/357 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++FDF+LPP IA P+ R ARLMV++ I + +LP +L D +V
Sbjct: 1 MRLEDFDFELPPELIAKYPLKERHMARLMVLNRKDKS---IKHDIFWNLPLYLEEGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKVI A+L G + + L + + W K I++G ++
Sbjct: 58 FNNTKVIPARLYGKKP-----TGGRVEILLTDMLKEHLWYALVS-GKNIREGLCVYIAQD 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L ++ + G+ L+ + + G IP+PPY+ R+ + D V Y
Sbjct: 112 -----LSVNILKHISEGKFLVELLSQDPI--KALYTYGHIPIPPYLEREE--EHIDRVYY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +GSVAAPTA LHF+ LL+RL GI+ F+TLHV GTF P+KV D +H +
Sbjct: 163 QTVFAQKEGSVAAPTASLHFSEELLNRLDEYGIRKAFITLHVSYGTFKPIKVSDIREHKV 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
E + T + + VK G ++V+VGTT +R LET +P+SG T+++I PG
Sbjct: 223 DEEYMEVPEETVELIKKVKQEGKKVVAVGTTVVRALET-----KPFSPFSGKTDLYIYPG 277
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+ VD +++NFHLP+S+LL+LVSAF G E YQ AI YRFYSYGD L+
Sbjct: 278 YTFKVVDAMITNFHLPRSSLLLLVSAFAGREFILSAYQIAIKERYRFYSYGDGMLIL 334
>gi|56476202|ref|YP_157791.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Aromatoleum
aromaticum EbN1]
gi|56312245|emb|CAI06890.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase, first step
of queuosine biosynthesis [Aromatoleum aromaticum EbN1]
Length = 354
Score = 404 bits (1039), Expect = e-110, Method: Composition-based stats.
Identities = 142/359 (39%), Positives = 201/359 (55%), Gaps = 20/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FD+ LPP IA P+ R ++RL+V+ + D DLP + D +V
Sbjct: 12 LTLDDFDYLLPPELIAQAPLAERCASRLLVLDGER-----LDDRGFCDLPELVQPGDLLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + I + + P+ R SK + G L
Sbjct: 67 FNDTRVIHARLYGTKE-----TGGHIEVLIERAIGPHEALAQVRASKSPRAGSRLRLADA 121
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ TV+ + GE + ++ + G +PLPPYI R D D Y
Sbjct: 122 -----FDVTVLGRV--GEFFHLRFPDSHDVLDLLEHHGKLPLPPYI--DRSADEHDESRY 172
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +GSVAAPTAGLHF +L+ L G+ ++TLHVGAGTF PV+V D +H M
Sbjct: 173 QTVYARERGSVAAPTAGLHFDQPMLAELAKKGVHGAWLTLHVGAGTFQPVRVNDLGEHRM 232
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I T A+ + ++ G R+++VGTTSLR LE A +DG + +G T +FI PG
Sbjct: 233 HRERYVIPQETVAAIAATRAAGRRVIAVGTTSLRALEGAA-QDGPLEAGTGETELFILPG 291
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRF+ VD L++NFHLPKSTLLMLVSAF G+E ++ Y HA+ H+YRF+SYGD + +
Sbjct: 292 YRFQVVDALITNFHLPKSTLLMLVSAFAGLEPMRRAYTHAVGHSYRFFSYGDAMFITHR 350
>gi|330836555|ref|YP_004411196.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Spirochaeta coccoides DSM 17374]
gi|329748458|gb|AEC01814.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Spirochaeta coccoides DSM 17374]
Length = 346
Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats.
Identities = 136/357 (38%), Positives = 194/357 (54%), Gaps = 13/357 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF FDLP IA P R ++ L+V+ ++D + D +FL + +V
Sbjct: 1 MKTKEFFFDLPEELIAQTPSERRGASHLLVLDKTTGK---LTDSSMEDFASFLPEDAVMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN+KV A+ G I+ ++ + +W+V SK K G F +
Sbjct: 58 INNSKVRKARAYG-----ISGSGGKVEFLFLEENADQTWNVMVTKSKKQKSGKEYVFHAP 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
DG+ A +I + G + S + E G +PLPPYI KR D Y
Sbjct: 113 DGRIGASAQIIRENPDGTKTV--SFNAPITEAFFQECGHVPLPPYI--KREDTFSDESRY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +GSVAAPTAGLHFT +L + G++V VTLHVG GTF+P++V+D +DH M
Sbjct: 169 QTIYARPEGSVAAPTAGLHFTGEILDSIRERGVQVVPVTLHVGPGTFLPMRVDDIEDHHM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
H E + TA+ + K+ +++VGTTS+R LE+A G++ P G TN+FITP
Sbjct: 229 HYERYEVPEDTARIVTDAKANNRPVIAVGTTSIRTLESAWDSVHGMLTPGQGRTNLFITP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
G+ +R + L++NFH P+STLL+LVSAF G + Y HAI Y F+SYGD +
Sbjct: 289 GFTYRVANHLLTNFHTPESTLLVLVSAFAGKDLIFSAYHHAIERRYHFFSYGDAMFI 345
>gi|294674502|ref|YP_003575118.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
ruminicola 23]
gi|294471740|gb|ADE81129.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
ruminicola 23]
Length = 354
Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats.
Identities = 125/361 (34%), Positives = 190/361 (52%), Gaps = 13/361 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP +IAL P F RD +LMV+H D ++ + + +DA +
Sbjct: 1 MKLSQFKFKLPEEQIALEPPFHRDECKLMVLHRKSKRIESGLD--FRNILDYFDEDDAFI 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + + +I L ++ + W V P++ I+ G+ L FF
Sbjct: 59 FNDTKVFPARLYGTK----EKTDAKIEVFLLRELNADQRLWDVLVEPARKIRIGNKL-FF 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDARD 176
+DG + A VID + L F E ++ + +G PLP YI +RP D
Sbjct: 114 EEDGP--MVAEVIDNTTSRGRTLRFLYDCPHDEFKQMLFGLGEAPLPRYIIDRRPATEED 171
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
++QT YAK +G+V AP GLHF+ L+ R+ GI F+TLH G G F ++VED
Sbjct: 172 MTNFQTIYAKNEGAVTAPATGLHFSRELMKRMEIKGINFAFITLHCGLGNFDAIEVEDLT 231
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE FI A + +N K G R+ VG ++ R E+A DG++ + G+TN F
Sbjct: 232 KHKMSSEQMFIPAEACEIVNKAKEEGHRVCCVGVSTARATESAVGTDGMLKEFEGWTNKF 291
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F + L+ NF+ P+S ++M ++F G + + YQ A+ Y+F YGD L+
Sbjct: 292 IFPPYEFGLCNALIGNFYHPESPMMMTEASFAGYDLLYEGYQRALKEGYKFGCYGDALLM 351
Query: 357 F 357
Sbjct: 352 L 352
>gi|170691380|ref|ZP_02882545.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Burkholderia graminis C4D1M]
gi|170143585|gb|EDT11748.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Burkholderia graminis C4D1M]
Length = 352
Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats.
Identities = 138/364 (37%), Positives = 193/364 (53%), Gaps = 22/364 (6%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVH--PNLSCPLVISDHLVSDLPAFLNSNDAI 59
+ +FDFDLPP IA + R ++RL+ V + + D ++LP + D +
Sbjct: 3 TLSDFDFDLPPELIAQVALPERSASRLLQVDNAADADRAARLIDRRFAELPDCIAPGDLL 62
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFN+TKV+ A+ G + +I + + R SK + G +
Sbjct: 63 VFNDTKVLKARFLGQKAS-----GGKIEVLVERLTGERTALAQIRASKSPQPGTTIRLAD 117
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ TV ++ L + I G +PLPPYI D+ D
Sbjct: 118 A-----FDVTVGERVEPFYTLHFP----ADCLTLIEQFGRLPLPPYIEHD--PDSIDEAR 166
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ G+VAAPTAGLHF L +RL + G++ +TLHVGAGTF PV+VE+ +H
Sbjct: 167 YQTVYAQNPGAVAAPTAGLHFDDALFARLDAHGVERATLTLHVGAGTFQPVRVENLAEHK 226
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSL----RLLETATTEDGIINPWSGFTNI 295
MHSE + A + + K+RG R+++VGTTS+ A + S T+I
Sbjct: 227 MHSEWYHLPQSLADKIAATKARGNRVIAVGTTSMRALEAAARDAEAAGRPLAATSTETDI 286
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI YRF+SYGD L
Sbjct: 287 FITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIRAAYRHAIEQRYRFFSYGDAML 346
Query: 356 LFQK 359
L ++
Sbjct: 347 LTRR 350
>gi|91786377|ref|YP_547329.1| S-adenosylmethionine [Polaromonas sp. JS666]
gi|91695602|gb|ABE42431.1| S-adenosylmethionine [Polaromonas sp. JS666]
Length = 353
Score = 403 bits (1037), Expect = e-110, Method: Composition-based stats.
Identities = 146/358 (40%), Positives = 198/358 (55%), Gaps = 18/358 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF LP IA P R ++RL+ +D +DLP L D +VFN
Sbjct: 7 LSDFDFALPEELIAQHPAAQRSASRLL-----DGRSSPATDRRFADLPDLLTPGDLLVFN 61
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSP-NSWSVYARPSKVIKKGDILHFFSQD 121
+T+V+ A+L G + R E I L + + + + SK + G +L
Sbjct: 62 DTQVVKARLFGQKSTG-GRLELLIERVLPALADASHEVAAHMKVSKKPQPGAVLQ----- 115
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
AT++ +W + L + ++ G +PLPPYI A D + YQ
Sbjct: 116 MDGGFTATLLGRWPQEDGPLYRFRFSSDPYALMAQHGHVPLPPYITHS--DSAEDELRYQ 173
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +AK G+VAAPTA LHF +L++L + GI VTLHVGAGTF PVK E DH MH
Sbjct: 174 TVFAKNPGAVAAPTAALHFDEAMLAQLEARGIARASVTLHVGAGTFQPVKTETIADHTMH 233
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E + A T QA+ + K+RGGR+V+VGTT++R LE+ P TNIFITPG+
Sbjct: 234 FERFEVPAATQQAIAACKARGGRVVAVGTTTVRALESHA----KFGPACDDTNIFITPGF 289
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
F VD+L++NFHLPKSTL+MLVSAF G E +YQHAI+ YRF+SYGD LL +K
Sbjct: 290 EFAVVDLLLTNFHLPKSTLMMLVSAFAGYEHIMALYQHAIAGRYRFFSYGDAMLLARK 347
>gi|119357442|ref|YP_912086.1| queuosine biosynthesis protein [Chlorobium phaeobacteroides DSM
266]
gi|119354791|gb|ABL65662.1| Queuosine biosynthesis protein [Chlorobium phaeobacteroides DSM
266]
Length = 346
Score = 403 bits (1037), Expect = e-110, Method: Composition-based stats.
Identities = 121/360 (33%), Positives = 194/360 (53%), Gaps = 17/360 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F + LP ++IA +P PRDS RLMV++ I D+ + D +V
Sbjct: 1 MRLSNFRYILPKTKIAEKPASPRDSCRLMVLNRRK---KEIDHKNFEDISGYFKKGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
NN++V A++ G + + + +I L ++ ++ W V P++ ++ G+ ++F
Sbjct: 58 VNNSRVFPAKIFGQK----EKTDAKIEVFLLRVLNKDAGLWDVLVDPARKVRVGNKIYF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ A V+D + + F +++ + +G +PLPPY R P+D+ D
Sbjct: 113 ----DEDIVAEVVDNTTSRGRTIRFLNPEVDVFSLVERIGHVPLPPYFTR-LPVDS-DKE 166
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT YA G+V AP AG+HFT LL ++ +G+K+ +TLH TF ++VED H
Sbjct: 167 DYQTVYASQTGAVVAPMAGMHFTMPLLQKIQKMGVKILPITLHPSLSTFNAIEVEDVSKH 226
Query: 239 IMHSEIGFIDAPTAQALNSVKSRG-GRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
M SE I TA +N K GR+++VGT++ R+LE T DG I SG+T+ FI
Sbjct: 227 KMDSEYFNIPYQTAMEINETKINKTGRVIAVGTSTCRVLEANATVDGKIKFGSGWTDKFI 286
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
P Y+F+ D L++NF P++TLLM+VSAF Y+ A+ Y+F +YGD ++
Sbjct: 287 YPPYQFKVTDALITNFQQPETTLLMVVSAFAEHRLLMDAYKVALKSEYQFLAYGDAMFIY 346
>gi|114331419|ref|YP_747641.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Nitrosomonas eutropha C91]
gi|122313768|sp|Q0AG56|QUEA_NITEC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|114308433|gb|ABI59676.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Nitrosomonas eutropha C91]
Length = 346
Score = 403 bits (1037), Expect = e-110, Method: Composition-based stats.
Identities = 146/357 (40%), Positives = 202/357 (56%), Gaps = 18/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ R +R++ ++ S + D DLPA+L D IV
Sbjct: 1 MKTDDFDFSLPNELIAQLPLANRADSRMLYIN---SRQSDLRDAAFKDLPAYLKQGDVIV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+V+ A+L G + ++ + + + R S G L +
Sbjct: 58 FNNTRVVKARLAGFK-----STGGKVEVMIERILGTHQARALIRASHAPAIGSTLLLENA 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
TV + +I + I L + G PLPPYI R A D Y
Sbjct: 113 -------ITVQVEAREQDIYTLRFIHSQPLIELLDQYGHTPLPPYI--GRIATASDESRY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF +L+ L ++GIK+ +VTLHVGAGTF PV+VE+ + HIM
Sbjct: 164 QTVFAQETGAVAAPTAGLHFDETMLTTLQTLGIKIAWVTLHVGAGTFQPVRVENINQHIM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-EDGIINPWSGFTNIFITP 299
H+E I T + + K+ GG +++VGTTSLR LE + DG + S TN+FITP
Sbjct: 224 HTEQYHIPTETIEIIRRCKAGGGSVLAVGTTSLRALEASALIGDGELVAGSNETNLFITP 283
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
G++FR VD L++NFHLP+STLLMLVSAF GIE + YQHA+++ YRF+SYGD L+
Sbjct: 284 GFQFRVVDRLLTNFHLPRSTLLMLVSAFAGIETIRHAYQHAVNNHYRFFSYGDAMLI 340
>gi|91207413|sp|Q5P721|QUEA_AZOSE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
Length = 345
Score = 403 bits (1037), Expect = e-110, Method: Composition-based stats.
Identities = 142/359 (39%), Positives = 201/359 (55%), Gaps = 20/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FD+ LPP IA P+ R ++RL+V+ + D DLP + D +V
Sbjct: 3 LTLDDFDYLLPPELIAQAPLAERCASRLLVLDGER-----LDDRGFCDLPELVQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + I + + P+ R SK + G L
Sbjct: 58 FNDTRVIHARLYGTKE-----TGGHIEVLIERAIGPHEALAQVRASKSPRAGSRLRLADA 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ TV+ + GE + ++ + G +PLPPYI R D D Y
Sbjct: 113 -----FDVTVLGRV--GEFFHLRFPDSHDVLDLLEHHGKLPLPPYI--DRSADEHDESRY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +GSVAAPTAGLHF +L+ L G+ ++TLHVGAGTF PV+V D +H M
Sbjct: 164 QTVYARERGSVAAPTAGLHFDQPMLAELAKKGVHGAWLTLHVGAGTFQPVRVNDLGEHRM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I T A+ + ++ G R+++VGTTSLR LE A +DG + +G T +FI PG
Sbjct: 224 HRERYVIPQETVAAIAATRAAGRRVIAVGTTSLRALEGAA-QDGPLEAGTGETELFILPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRF+ VD L++NFHLPKSTLLMLVSAF G+E ++ Y HA+ H+YRF+SYGD + +
Sbjct: 283 YRFQVVDALITNFHLPKSTLLMLVSAFAGLEPMRRAYTHAVGHSYRFFSYGDAMFITHR 341
>gi|78187173|ref|YP_375216.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Chlorobium
luteolum DSM 273]
gi|78167075|gb|ABB24173.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Chlorobium
luteolum DSM 273]
Length = 346
Score = 403 bits (1037), Expect = e-110, Method: Composition-based stats.
Identities = 121/359 (33%), Positives = 189/359 (52%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F + LP ++IA P PRDS ++MV++ I + D+ ++ D ++
Sbjct: 1 MRLSNFRYTLPKTKIADHPADPRDSCKMMVLNRRKKD---IEHKVFEDIASYFKKGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV--SPNSWSVYARPSKVIKKGDILHFF 118
NN++V A++ G + + + +I L + W V P++ ++ G+ ++F
Sbjct: 58 LNNSRVFPAKIFGQK----EKTDAKIEVFLLRVLNREAGLWDVLVDPARKVRVGNKIYF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ A V+D + + F I++ + +G +PLPPY RK D
Sbjct: 113 ----DEDVVAEVVDNTTSRGRTIRFLNPEIDVFSLVDRIGNVPLPPYFTRK--SKDSDKE 166
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
+YQT YA GSV AP AGLHFT LL ++ IG+KV +TLH TF ++VED H
Sbjct: 167 NYQTVYANQTGSVVAPMAGLHFTMPLLQKIQKIGVKVLPITLHPSLSTFNAIEVEDVSKH 226
Query: 239 IMHSEIGFIDAPTAQALNSVK-SRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
M SE I TA +N K + GR+++VGTT+ R+LE T DG I G+T+ FI
Sbjct: 227 KMDSEYFNIPYQTAMEINETKMKKSGRVIAVGTTTCRVLEANATVDGKIKFGQGWTDKFI 286
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
P Y+F+ D L++NF P++TLLM+VSAF Y+ A+ + Y+F +YGD +
Sbjct: 287 YPPYQFKVTDALVTNFQQPETTLLMVVSAFAEHRLLMDAYKVALKNDYKFLAYGDAMFI 345
>gi|226226034|ref|YP_002760140.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Gemmatimonas aurantiaca T-27]
gi|226089225|dbj|BAH37670.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Gemmatimonas aurantiaca T-27]
Length = 353
Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats.
Identities = 140/357 (39%), Positives = 199/357 (55%), Gaps = 16/357 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++D++LP RIA PV PRD++RL+VV ++ D+ + + + DA+V
Sbjct: 12 RTADYDYELPEERIAQLPVEPRDASRLLVVDRESGS---LTHRQFRDVVSLIPAGDAVVL 68
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N TKV A+L G R L + + P ++ G +
Sbjct: 69 NTTKVFRARLLGHRESGGPA-----EILLLRHLRDAHYEAMIHPGGKLRPGRTVTIAPG- 122
Query: 122 GQSRLEATVIDKWNTGEILL-VFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
++D ++ + + ++ I G IPLPPYI R D Y
Sbjct: 123 ----FTVEIVDTTPRRTRIVKLHAPEFSSVQSAIEQHGHIPLPPYIERS--DTDADAARY 176
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA GSVAAPTAGLHFT +LL+ L + G++ V LHVGAGTF PV +D H+M
Sbjct: 177 QTIYAAQAGSVAAPTAGLHFTDDLLATLDARGVERVNVLLHVGAGTFRPVSDDDPSQHVM 236
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + A LN+V++RGG+I +VGTTS+R +ETA T DG+I+P+ G TNIF+ P
Sbjct: 237 HEEWCEVTPDAAARLNAVRARGGKIWAVGTTSVRTIETAATPDGVIHPYIGETNIFLRPP 296
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+FR VD L++NFHLP+STL+MLV+AF G + T + Y+ A++ YRFYSYGD +L
Sbjct: 297 YQFRGVDHLITNFHLPRSTLIMLVAAFAGYDLTMQAYRTAVAEQYRFYSYGDAMVLL 353
>gi|332181217|gb|AEE16905.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase [Treponema
brennaborense DSM 12168]
Length = 345
Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats.
Identities = 135/358 (37%), Positives = 188/358 (52%), Gaps = 14/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M K+F FDLP IA P R +LMV+ + L+ DLP + N +V
Sbjct: 1 MRTKDFYFDLPEELIAQHPSGIRGQDKLMVLDKATGD---VRHQLMDDLPDLVPQNALMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN++V +++ G++ +E ++P W + +K + G+ F
Sbjct: 58 FNNSRVRRSRVYGIK----ENTGRETEFLFLTPLAPTLWKTMVKNAKKQRPGNRYRFP-- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + + G S + E+ G IPLPPYI RK D Y
Sbjct: 112 --DGSVGVITENPADAGTEFRTLSFTQPIEEQWFERNGHIPLPPYIKRK--DTEEDSERY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
Q YA+ GS A PTAGLHFT +L +L S GI+ FVTLHVG GTF+PV+ E +DH M
Sbjct: 168 QNIYARETGSAACPTAGLHFTERMLEKLDSRGIRRTFVTLHVGLGTFLPVRAERIEDHTM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
H E + TA+ +N+ K G +++VGTTS+R LE+A + P T IF+ P
Sbjct: 228 HEETYSVSRETAELVNTAKKEGRPVLAVGTTSVRTLESAWDPVKSELIPGINSTRIFMYP 287
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GYRF VD + +NFH P+STLLMLVSAF G E Y++A++H YRF+SYGD L+
Sbjct: 288 GYRFNVVDKMFTNFHTPESTLLMLVSAFAGKEHIMDAYRNAVAHRYRFFSYGDAMLIL 345
>gi|319944500|ref|ZP_08018771.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Lautropia
mirabilis ATCC 51599]
gi|319742213|gb|EFV94629.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Lautropia
mirabilis ATCC 51599]
Length = 351
Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats.
Identities = 147/359 (40%), Positives = 197/359 (54%), Gaps = 16/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLV-ISDHLVSDLPAFLNSNDAI 59
M + +FD+ LP IA P R RL+ V + P +D L++DLP + +
Sbjct: 1 MKLSDFDYHLPEELIAQYPPEQRAGGRLLDVTTLMQQPEASAADRLLADLPELIAPGSLL 60
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFN+T+VI A+L G + I + + R S K G LHF
Sbjct: 61 VFNDTRVIHARLAGRKES-----GGRIEVMVERIDGEHEVLAMVRASHPPKAGSRLHFGP 115
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
++ ATV+ G ++L + +G +PLPPYI + D D
Sbjct: 116 ENATE--CATVVSAREPGSMMLRIRFDAPA-AGVLERLGELPLPPYIQHQ--PDQADEAR 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A+ G+VAAPTAGLHF LL+ L + GI +TLHVGAGTF+PV+ ED H
Sbjct: 171 YQTVFAREPGAVAAPTAGLHFDEALLAALRARGIDSAHLTLHVGAGTFLPVRTEDLSQHH 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE + A TAQA+ K+ G +V++GTT+LR LE + SG T++FITP
Sbjct: 231 MHSERYTLSAETAQAIARAKAEGRPVVAIGTTALRALEASGG-----VAGSGETDLFITP 285
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
GYRFR VD L +NFHLPKSTLL+LVSAF G E ++ Y HAI+ YRF+SYGD LL +
Sbjct: 286 GYRFRVVDRLFTNFHLPKSTLLILVSAFAGRETIRRAYAHAIAQRYRFFSYGDAMLLDR 344
>gi|56697089|ref|YP_167452.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ruegeria
pomeroyi DSS-3]
gi|81558479|sp|Q5LRA3|QUEA_SILPO RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|56678826|gb|AAV95492.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ruegeria
pomeroyi DSS-3]
Length = 349
Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats.
Identities = 162/346 (46%), Positives = 216/346 (62%), Gaps = 14/346 (4%)
Query: 15 IALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGV 74
IA RP PR SARL+V + ISD +V DLP +L D +V N+T+VI A+L+G
Sbjct: 15 IATRPAQPRSSARLLVARGD-----AISDAVVRDLPDWLRPGDRLVLNDTRVIPARLSGT 69
Query: 75 RF--CHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVID 132
R I TL + SWS A+P + +++G+ + F S D + +EA
Sbjct: 70 RQRQSAQGPVTARIEITLLEPRADGSWSALAKPLRKLREGETIIF-SNDLSADVEAI--- 125
Query: 133 KWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVA 192
G+ LL F+++G + + ++ G +PLPPYIA KR D +D DYQT +A+ G+VA
Sbjct: 126 --EDGQALLRFNLTGPDFDAALAQAGAMPLPPYIAAKRAADEQDKTDYQTVWARHSGAVA 183
Query: 193 APTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTA 252
APTA LHF LL+ L + G+ VTLHVGAGTF+PVKVED H MH+E G + A A
Sbjct: 184 APTASLHFDDTLLAALAAHGVTFTHVTLHVGAGTFLPVKVEDVTTHKMHAEWGRVSAEAA 243
Query: 253 QALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSN 312
+ + K+ GGR++ VGTT+LRL+E+A G I PW G T+IFI PG+ FR D LM+N
Sbjct: 244 AEIAATKAAGGRVIPVGTTALRLIESAAR-GGQIAPWEGDTDIFIYPGFDFRVADGLMTN 302
Query: 313 FHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
FHLPKSTLLMLVSA G E +K+Y HA+ + YRF+SYGD SLL
Sbjct: 303 FHLPKSTLLMLVSALMGQESIRKIYAHAVENRYRFFSYGDASLLLP 348
>gi|78065287|ref|YP_368056.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia sp. 383]
gi|91207416|sp|Q39JF4|QUEA_BURS3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|77966032|gb|ABB07412.1| Queuosine biosynthesis protein [Burkholderia sp. 383]
Length = 355
Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats.
Identities = 136/362 (37%), Positives = 194/362 (53%), Gaps = 21/362 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDF+LPP IA + R ++RL+ V P + D ++LP+ +++ D +VF
Sbjct: 3 TLSDFDFNLPPELIAQTALPDRTASRLLEVDG-TVAPARLVDRHFTELPSCISAGDLLVF 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKV+ A+ G + +I + ++ R SK G L
Sbjct: 62 NDTKVLKARFFGQKAS-----GGKIEVLIERVTGTHTALAQIRASKSPGAGTTLRLADA- 115
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ TV ++ + L I G +PLPPYI DA D YQ
Sbjct: 116 ----FDVTVGERVDPFFTLNFPEPC----LDLIEQYGRLPLPPYIEHD--PDATDETRYQ 165
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YA G+VAAPTAGLHF +L RL ++G++ +TLHVGAGTF PV+V++ +H MH
Sbjct: 166 TVYASNPGAVAAPTAGLHFDQPMLDRLDAMGVERATLTLHVGAGTFQPVRVDNIAEHKMH 225
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSL----RLLETATTEDGIINPWSGFTNIFI 297
SE + + + ++RGG +++VGTTS+ A + T+IFI
Sbjct: 226 SEWYDLPQSLVDKIAATRARGGNVIAVGTTSMRALEAAARAADEAGRPLAATQAETDIFI 285
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI YRF+SYGD LL
Sbjct: 286 TPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIRAAYRHAIEQRYRFFSYGDAMLLT 345
Query: 358 QK 359
++
Sbjct: 346 RR 347
>gi|51246695|ref|YP_066579.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Desulfotalea psychrophila LSv54]
gi|81641194|sp|Q6AJA8|QUEA_DESPS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|50877732|emb|CAG37572.1| probable S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Desulfotalea psychrophila LSv54]
Length = 358
Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats.
Identities = 121/351 (34%), Positives = 185/351 (52%), Gaps = 10/351 (2%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
+ + LP IA +P RD ++LMV++ + + + +++ ++N D ++ NNTK
Sbjct: 10 YYYHLPEENIAQKPADKRDHSKLMVLNTSTGK---VEHKIFNNVLEYINPGDMLIVNNTK 66
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSR 125
V A+L G + + ++R + + S+ K G L
Sbjct: 67 VFPARLTGHKESGGKVEVFLLELPTYIRPGVSESIALIKSSRKPKVGSTLTI-----NEA 121
Query: 126 LEATVIDKWNTGEILLVFSIS-GIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTY 184
L V ++ G+ L +++ ++ +G IPLPPYI R+ D YQT Y
Sbjct: 122 LSCRVTEQLAGGKARLQLHYDKDVDVTEILAGIGEIPLPPYIKREEGTTPEDVTRYQTVY 181
Query: 185 AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEI 244
A + G+VAAPTAGLHFT LL L GI+ VTLHVG GTF PV+ E+ +H +H E
Sbjct: 182 ANVPGAVAAPTAGLHFTEELLQSLRENGIQFGEVTLHVGYGTFAPVRAENIVEHNIHEEF 241
Query: 245 GFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE-TATTEDGIINPWSGFTNIFITPGYRF 303
+ T + + + GG+I +VGTT++R LE A G I G+ ++I PG++F
Sbjct: 242 VSVGQETVDKIIATRKAGGKIWAVGTTTVRSLEFAAAQHGGQIAATEGWCALYIYPGFKF 301
Query: 304 RAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
+ +D L++NFHLP S+L+ LVSA C E+ + YQ AI YRF+SYGD
Sbjct: 302 QVIDNLITNFHLPDSSLMFLVSALCRREKLLECYQMAIKEDYRFFSYGDAM 352
>gi|239818027|ref|YP_002946937.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Variovorax
paradoxus S110]
gi|239804604|gb|ACS21671.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Variovorax
paradoxus S110]
Length = 348
Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats.
Identities = 138/361 (38%), Positives = 199/361 (55%), Gaps = 25/361 (6%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDFDLPP +A P R ++RL+ +D + LP+ L + D +VF
Sbjct: 5 TLSDFDFDLPPELVAQHPASERTASRLL-----DGTGSTPADRIFKSLPSLLRAGDLLVF 59
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L G + ++ + + + + + SK G L
Sbjct: 60 NDTRVVKARLFGEKP-----TGGKLELLVERVLQGHEVVAHMKVSKKPPVGTTLQMV--- 111
Query: 122 GQSRLEATVIDKW-NTGEILLVF---SISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
AT++ +W L F S +G + ++ G +PLPPYI D D
Sbjct: 112 --GGFRATLLGRWPEEDGALFRFGFESGAGEDPYALMARCGHVPLPPYIMHSDSAD--DE 167
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT +A++ G+VAAPTA LHF LL+ L + G++ VTLHVGAGTF PVK E+ +
Sbjct: 168 RRYQTVFARVPGAVAAPTAALHFDEALLAELETRGVQRASVTLHVGAGTFQPVKTENIAE 227
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+E + T +A+ K+RGGR+V+VGTT++R LE+ +G T IFI
Sbjct: 228 HTMHAERYEVPEATQRAIADCKARGGRVVAVGTTTVRTLESWAKSG----EAAGDTRIFI 283
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPG+ F VD+L++NFHLPKSTL+MLVSAF G E +Y HAI+ YRF+SYGD LL
Sbjct: 284 TPGFVFEHVDLLVTNFHLPKSTLMMLVSAFAGYEHVMALYAHAIAQHYRFFSYGDAMLLA 343
Query: 358 Q 358
+
Sbjct: 344 R 344
>gi|299138179|ref|ZP_07031359.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Acidobacterium sp. MP5ACTX8]
gi|298600109|gb|EFI56267.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Acidobacterium sp. MP5ACTX8]
Length = 373
Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats.
Identities = 148/377 (39%), Positives = 205/377 (54%), Gaps = 24/377 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+V +F +DLP IA RP R ++R+M + SDH ++LP L D +V
Sbjct: 1 MLVSDFHYDLPEELIAQRPPAVRGTSRMMTLDRRTGD---FSDHTFAELPLLLQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINR-----REKEISCTLHMRVSP----NSWSVYARPSKVIKK 111
N+++VI A+L R + I L R + N WS RP+K I+
Sbjct: 58 MNDSRVIPARLFATRAGLTTQHNSPAPSGHIEVLLTQRHASAEGYNDWSALVRPAKKIQP 117
Query: 112 GDILHFFSQDGQSRL-EATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIAR-- 168
G+ L F D + L ATV+ GE L F + + + +G +PLPPYI R
Sbjct: 118 GETLLFAPDDSTAPLLRATVLSAGEFGERTLRFDPA-EDFHAALERIGHLPLPPYIHRSK 176
Query: 169 KRPIDARDYVDYQTTYAKI------QGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHV 222
+ P + D YQT Y++ +GS AAPTAGLHFT +LS+L G++ +TLHV
Sbjct: 177 QEPNTSEDRERYQTVYSQQLTSAEAEGSAAAPTAGLHFTPEVLSQLKERGVEFATLTLHV 236
Query: 223 GAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE 282
G GTF PV+VE T+D +H+E + TA+A+ + G RIV+VGTT+ R LE E
Sbjct: 237 GLGTFQPVRVERTEDIRLHAEHYTLSTTTAEAIQRARREGRRIVAVGTTTTRTLEHIARE 296
Query: 283 --DGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHA 340
I SG T +F++PG F+ V L++NFHLP+STLLMLVSAF G E+ Y HA
Sbjct: 297 TNGSEIAAHSGSTALFLSPGVEFKLVGGLLTNFHLPQSTLLMLVSAFAGREQALAAYAHA 356
Query: 341 ISHAYRFYSYGDTSLLF 357
+ YRF+SYGD L+
Sbjct: 357 VEARYRFFSYGDCMLIT 373
>gi|117923911|ref|YP_864528.1| queuosine biosynthesis protein [Magnetococcus sp. MC-1]
gi|259551461|sp|A0L579|QUEA_MAGSM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|117607667|gb|ABK43122.1| Queuosine biosynthesis protein [Magnetococcus sp. MC-1]
Length = 363
Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats.
Identities = 143/360 (39%), Positives = 204/360 (56%), Gaps = 19/360 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +D+DLP + IA RP+ PRD ARL+V S + D L L + D +V
Sbjct: 13 RLSHYDYDLPAAHIAQRPMEPRDHARLLV-----SRAQGVEDSRFDQLVEHLQAGDLLVL 67
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN--SWSVYARPSKVIKKGDILHFFS 119
N+TKVI A+L G + + L + W R +K +K G + F
Sbjct: 68 NDTKVIPARLLGHKPS-----GGRVEIFLLKPDPQHPPLWRAMTRSNKPLKVGQRVEFGE 122
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
A ++++ G +L+ G+ L+ + G +PLPPYI+ +D
Sbjct: 123 D-----FYAELVERQAEGHVLVALHAVGMGLDEAMQHYGQMPLPPYISGSDA--QQDKSR 175
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A+ G+VAAPTAGLHFT L RL + G+ VTLHVG GTF PV+VED D H
Sbjct: 176 YQTVFARRDGAVAAPTAGLHFTDALFERLAAKGVTWCHVTLHVGLGTFQPVRVEDLDAHP 235
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH E ++A + K+ GGR+V+VGTT++R LE++ + G++ G T +FI P
Sbjct: 236 MHGEWRQLEADAVAKIQRTKAAGGRVVAVGTTAVRTLESSVDDQGVLQASCGETRLFIRP 295
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
GYRF+ VD++++NFHLPKSTLLMLV+AF G ++ Y HA+ YRFYSYGDT+LL+ +
Sbjct: 296 GYRFKVVDLMLTNFHLPKSTLLMLVAAFVGRSRLRRDYAHAMGKNYRFYSYGDTTLLYPQ 355
>gi|146283382|ref|YP_001173535.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
stutzeri A1501]
gi|145571587|gb|ABP80693.1| S-adenosylmethionine:trna ribosyltransferase-isomerase [Pseudomonas
stutzeri A1501]
Length = 321
Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats.
Identities = 132/330 (40%), Positives = 183/330 (55%), Gaps = 20/330 (6%)
Query: 29 MVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISC 88
MV+ +S +DL + D +VFNNT+VI A+L G + ++
Sbjct: 1 MVLDGESG---QMSHRNFADLLDCVRPGDLMVFNNTRVIPARLFGQKA-----TGGKLEI 52
Query: 89 TLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGI 148
+ + S + R SK K G + A ++ + +T L +
Sbjct: 53 LVERVIGNRSVLAHVRSSKSPKPGSQILL-----DGGGTAEMVARHDT---LFELAFD-E 103
Query: 149 ELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRL 208
++ + +G +PLPPYI RP DA D YQT YA+ G+VAAPTAGLHF LL L
Sbjct: 104 DVLPLLERIGHMPLPPYI--DRPDDAADRERYQTVYAQRAGAVAAPTAGLHFDEALLGAL 161
Query: 209 ISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSV 268
G++ +VTLHVGAGTF PV+VE ++H MH E + A+ ++RGGR+++V
Sbjct: 162 RDAGVQTAYVTLHVGAGTFQPVRVERIEEHHMHHEWLEVTQEVVDAVAVCRARGGRVIAV 221
Query: 269 GTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFC 328
GTTS+R LETA DG + P+SG T+IFI PG F VD L++NFHLP+STLLMLVSAF
Sbjct: 222 GTTSVRSLETAAR-DGELKPFSGDTDIFIYPGKTFHVVDALVTNFHLPESTLLMLVSAFA 280
Query: 329 GIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
G ET Y A++ YRF+SYGD + +
Sbjct: 281 GYPETMAAYAEAVAQRYRFFSYGDAMFITR 310
>gi|91781856|ref|YP_557062.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia xenovorans LB400]
gi|123063204|sp|Q145H9|QUEA_BURXL RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|91685810|gb|ABE29010.1| Queuosine biosynthesis protein [Burkholderia xenovorans LB400]
Length = 352
Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats.
Identities = 139/365 (38%), Positives = 197/365 (53%), Gaps = 22/365 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSC--PLVISDHLVSDLPAFLNSNDA 58
+ + +FDFDLPP IA + R ++RL+ V P + D ++LP + + D
Sbjct: 2 LTLSDFDFDLPPELIAQVALPERSASRLLEVDNPAGATGPARLIDRRFAELPDCIAAGDL 61
Query: 59 IVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
+VFN+TKV+ A+ G + +I + + R SK + G +
Sbjct: 62 LVFNDTKVLKARFLGQKAS-----GGKIEVLVERLTGERTALAQIRASKSPQPGTTIRLA 116
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ TV ++ L + I G +PLPPYI DA D
Sbjct: 117 DA-----FDVTVGERVEPFYTLHFP----ADCLTLIEQFGRLPLPPYIEHD--PDATDET 165
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT +A+ G+VAAPTAGLHF LL+RL + G++ +TLHVGAGTF PV+VE+ +H
Sbjct: 166 RYQTVFAQNPGAVAAPTAGLHFDEALLARLDAAGVERATLTLHVGAGTFQPVRVENLAEH 225
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSL----RLLETATTEDGIINPWSGFTN 294
MHSE + A + + ++RG R+++VGTTS+ A + S T+
Sbjct: 226 KMHSEWYHLPQSLADKIAATRARGNRVIAVGTTSMRALEAAARDAEAAGRPLAAASTETD 285
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFITPGYRFR VD L++NFHLPKSTLLMLVSAF G+E ++ Y+HAI YRF+SYGD
Sbjct: 286 IFITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIREAYRHAIEARYRFFSYGDAM 345
Query: 355 LLFQK 359
LL ++
Sbjct: 346 LLTRR 350
>gi|257790735|ref|YP_003181341.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Eggerthella lenta DSM 2243]
gi|257474632|gb|ACV54952.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Eggerthella lenta DSM 2243]
Length = 361
Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats.
Identities = 133/371 (35%), Positives = 187/371 (50%), Gaps = 26/371 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+DLPP IA P RD RL+V+ I D + D+ +L ND ++
Sbjct: 1 MKTSDFDYDLPPELIAQEPAAERDGCRLLVMDRATGA---IEDRIFRDIADYLRPNDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--------WSVYARPSKVIKKG 112
N T+V+ A+L G + L V W V RP K +K G
Sbjct: 58 ANETRVMPARLLGAK----RGTGGSAEVFLLREVRDREPRTNQSALWEVLVRPGKRLKPG 113
Query: 113 D--ILHFFSQDGQSRLEATVIDKWNT---GEILLVFSISGIELERQISLVGTIPLPPYIA 167
++ F G+ L ++D GE L + L+ + VG PLPPYI
Sbjct: 114 TGAVVDFVDARGEVALSTEIVDWAENAQKGERLARLTTPLPSLDEALHAVGHTPLPPYIK 173
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
A D YQT Y++ + S AAPTAGLHFT L+ RL G++ V L VG TF
Sbjct: 174 NY----AGDEELYQTVYSRRESSAAAPTAGLHFTPALIERLREQGVRWETVELEVGLDTF 229
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGII 286
V +D + H++H+E + TA A+ + RGGR+++VGTTS+R LE+A E G +
Sbjct: 230 RIVDEDDPEQHVIHTEYYTVPERTADAIAETRERGGRVIAVGTTSVRSLESAWDAEAGAV 289
Query: 287 NPWSGFTN-IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAY 345
P T +++ PG +F VD L++NFH+P+STL+MLVSAF E Y+HAI Y
Sbjct: 290 TPRDRETTSLYLLPGSQFHVVDALITNFHVPRSTLMMLVSAFSTREHIMAAYRHAIEERY 349
Query: 346 RFYSYGDTSLL 356
R S+GD +
Sbjct: 350 RMLSFGDAMFI 360
>gi|295675565|ref|YP_003604089.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Burkholderia sp. CCGE1002]
gi|295435408|gb|ADG14578.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Burkholderia sp. CCGE1002]
Length = 352
Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats.
Identities = 143/364 (39%), Positives = 195/364 (53%), Gaps = 22/364 (6%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVIS--DHLVSDLPAFLNSNDAI 59
+ +FDFDLPP IA + R ++RL+ V + D ++LP L D +
Sbjct: 3 TLSDFDFDLPPELIAQVALPERSASRLLDVDAAGTADGAARLIDRRFTELPERLAPGDLL 62
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFN+TKV+ A+ G + +I + S R SK + G +
Sbjct: 63 VFNDTKVLKARFFGQKAS-----GGKIEVLVERLTGERSALAQIRASKSPQAGTTIRLAD 117
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ TV ++ + L + I G +PLPPYI DA D
Sbjct: 118 A-----FDVTVGERVDQFYTLHFPD----DCLTLIEQYGRLPLPPYIEHD--PDATDETR 166
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ G+VAAPTAGLHF LL+RL ++GI+ +TLHVGAGTF PV+VE+ +H
Sbjct: 167 YQTVYAQNPGAVAAPTAGLHFDDALLARLDALGIERATLTLHVGAGTFQPVRVENIAEHK 226
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSL----RLLETATTEDGIINPWSGFTNI 295
MHSE + A + + K+RG R+++VGTTS+ A + S T+I
Sbjct: 227 MHSEWYHLPQALADKIAATKARGNRVIAVGTTSMRALEAAARDAEAAGHPLAAASAETDI 286
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI YRF+SYGD L
Sbjct: 287 FITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIRAAYRHAIDERYRFFSYGDAML 346
Query: 356 LFQK 359
L ++
Sbjct: 347 LTRR 350
>gi|325831983|ref|ZP_08165080.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Eggerthella
sp. HGA1]
gi|325486304|gb|EGC88756.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Eggerthella
sp. HGA1]
Length = 361
Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats.
Identities = 131/371 (35%), Positives = 186/371 (50%), Gaps = 26/371 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD++LPP IA P RD RL+V+ + + D + D+ +L ND +V
Sbjct: 1 MKTSDFDYELPPELIAQEPAADRDGCRLLVMDRSTGK---LEDRIFRDIVDYLRPNDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--------WSVYARPSKVIKKG 112
N T+V+ A+L G + L V W V RP K +K G
Sbjct: 58 ANETRVMPARLLGAK----RGTGGAAEVFLLREVHDREPRTNRSALWEVLVRPGKRLKPG 113
Query: 113 D--ILHFFSQDGQSRLEATVIDKWNT---GEILLVFSISGIELERQISLVGTIPLPPYIA 167
++ F G L A ++D + GE L + + L+ + VG PLPPYI
Sbjct: 114 TGAVVDFADAQGDVALSAEIVDWADGAQKGERLARLTTTLPSLDEALHAVGHTPLPPYIK 173
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
A D YQT Y++ + S AAPTAGLHFT L+ RL G++ V L VG TF
Sbjct: 174 NY----AGDEELYQTVYSRRESSAAAPTAGLHFTPALIERLRDQGVRWETVELEVGLDTF 229
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-EDGII 286
V +D H++H+E + T A+ + R GR+V+VGTTS+R LE+A E G +
Sbjct: 230 RIVDEDDPQKHVIHTEYYTVPQRTVDAIAETRERSGRVVAVGTTSVRSLESAWNPETGAV 289
Query: 287 NPWSGFTN-IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAY 345
T +++ PG +F VD L++NFH+P+STL+MLVSAF E Y+HAI Y
Sbjct: 290 TARDRETTSLYLLPGSQFHVVDALVTNFHVPRSTLMMLVSAFSSREHIMAAYEHAIEERY 349
Query: 346 RFYSYGDTSLL 356
R S+GD +
Sbjct: 350 RLLSFGDAMFI 360
>gi|91207425|sp|Q5FR06|QUEA_GLUOX RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
Length = 347
Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats.
Identities = 173/353 (49%), Positives = 225/353 (63%), Gaps = 15/353 (4%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
FDF+LP IA P PRDSA L+ V P L H++ DLP FL D ++ NNT
Sbjct: 8 FDFELPRDHIATEPARPRDSATLLHVRPGLPPDP----HVIRDLPDFLREGDLLIANNTA 63
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSR 125
VI AQL R E +I TL ++ SW AR S+ +K DILHF G
Sbjct: 64 VIRAQLAATR------GEAKIGLTLDRILANGSWHALARNSRKLKPQDILHF----GDDP 113
Query: 126 LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYA 185
+ ATVI+ G + + FS+ G E + + VG + LPPYI R +D DY+T ++
Sbjct: 114 VTATVIENEGDGAVSIRFSVEGDEFDAFLERVGALALPPYIERPFGPTKQDDADYRTIFS 173
Query: 186 KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIG 245
+ +G+VAAPTAGLHFT +L+ L + GI+ +TLHVGAGTF+PV+ +H MH+E G
Sbjct: 174 QYRGAVAAPTAGLHFTPEVLAALDAKGIQRRTLTLHVGAGTFLPVRS-TIAEHKMHAEWG 232
Query: 246 FIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRA 305
IDA TA A+N ++RGGRIV+VGTTSLRLLE+A EDG + PW G T+IFI PGYRF+A
Sbjct: 233 EIDAETAAAINETRARGGRIVAVGTTSLRLLESAAREDGTVAPWRGETSIFIKPGYRFKA 292
Query: 306 VDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
VD+LM+NFHLP+STL MLV AF G E ++ Y +AI++ RFYSYGD LL +
Sbjct: 293 VDVLMTNFHLPRSTLFMLVCAFSGTETMREAYAYAIANGLRFYSYGDACLLER 345
>gi|224370223|ref|YP_002604387.1| QueA [Desulfobacterium autotrophicum HRM2]
gi|223692940|gb|ACN16223.1| QueA [Desulfobacterium autotrophicum HRM2]
Length = 352
Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats.
Identities = 142/359 (39%), Positives = 201/359 (55%), Gaps = 14/359 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ ++ ++LP RIA P RD +RL+ + ++ H DL LN +D +V
Sbjct: 3 RLSDYCYNLPQERIAQTPCQQRDGSRLLRLDRKSGD---VTHHGFQDLVTLLNPDDLLVI 59
Query: 62 NNTKVITAQLNGVRFCHI--NRREKEISCTLHMRVSPN--SWSVYARPSKVIKKGDILHF 117
NNT+V+ A+L G + + + L+ R SK K G +L
Sbjct: 60 NNTRVVPARLMGKKTTGGVIEVMIVDYAAGLNCLAGNGYFQCDCLVRASKSPKIGAVLEL 119
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+ + A V + G L FS +G ++ + I G +PLPPYI R ++ D
Sbjct: 120 GDE-----ITARVQARKG-GLFELKFSCAG-DVVQAIKRHGQLPLPPYIHRTNGLEPGDE 172
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQT YA +G+VAAPTAGLHFT L+ L + GI+ +TLHVG GTF+PV+V+D +
Sbjct: 173 TDYQTVYAANEGAVAAPTAGLHFTDTLMETLRAKGIEFCEITLHVGYGTFVPVRVDDIRE 232
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H +H E I A A+N K G R+V+VGTTS+R LE E G+I+P SG ++FI
Sbjct: 233 HQIHRESFEISEAAAAAVNRAKKAGRRVVAVGTTSVRTLEYGADETGLIHPGSGVCDLFI 292
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGYRF+ +D +++NFHLP+STLLMLVSAF G + + Y AI YRF+SYGD L+
Sbjct: 293 YPGYRFKLIDAMITNFHLPESTLLMLVSAFAGKDPIFRAYGAAIQSNYRFFSYGDAMLI 351
>gi|257455334|ref|ZP_05620569.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enhydrobacter aerosaccus SK60]
gi|257447296|gb|EEV22304.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enhydrobacter aerosaccus SK60]
Length = 357
Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats.
Identities = 147/370 (39%), Positives = 201/370 (54%), Gaps = 33/370 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FD+ LP IA P+ R ++RL+ + + D DLP LNS D +V
Sbjct: 3 LTLDDFDYQLPDELIARYPLAVRSASRLLYLPAHGQPK----DQQFVDLPELLNSGDLVV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP-------NSWSVYARPSKVIKKGD 113
FN+TKV+ A+L G + + + + ++ + R S+ K+G
Sbjct: 59 FNDTKVMKARLFGQKAS-----GGAVEVLVERILPDNATSNQKHTALCHVRASRSPKEGQ 113
Query: 114 ILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
L + ATV+ + + L + L + G +P+PPY R D
Sbjct: 114 TLSL----ADGNIHATVMGREDN---LFLLEFDQPIL-PVLEHYGELPIPPYFERH--AD 163
Query: 174 ARDYVDYQTTYAK--IQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK 231
D YQT + SVAAPTA LHF N+L+ L S GI FVTLHVGAGTF PVK
Sbjct: 164 DNDETRYQTVFHDPAKLASVAAPTASLHFDDNVLAALKSKGINTAFVTLHVGAGTFAPVK 223
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-----TTEDGII 286
ED H MHSE + TA +N K+RGG++++VGTT R+LETA + E+ ++
Sbjct: 224 TEDILRHKMHSEYAELPQATADLINQTKARGGQVIAVGTTVTRVLETAFQKTASFENPML 283
Query: 287 NPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYR 346
+ WSG T+IFI P +RF +D L++NFHLPKSTLLMLVSAF G E K+ YQHAI YR
Sbjct: 284 SAWSGDTDIFIYPSFRFGVIDKLITNFHLPKSTLLMLVSAFAGSEPIKQAYQHAIEQQYR 343
Query: 347 FYSYGDTSLL 356
F+SYGD LL
Sbjct: 344 FFSYGDAMLL 353
>gi|145219855|ref|YP_001130564.1| queuosine biosynthesis protein [Prosthecochloris vibrioformis DSM
265]
gi|145206019|gb|ABP37062.1| Queuosine biosynthesis protein [Chlorobium phaeovibrioides DSM 265]
Length = 346
Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats.
Identities = 118/359 (32%), Positives = 188/359 (52%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F + LP +RIA PV PRDS ++MV++ + D+ ++ D ++
Sbjct: 1 MRLSNFRYTLPKTRIADHPVEPRDSCKMMVLNRRK---KEVEHKTFEDIASYFKKGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRV--SPNSWSVYARPSKVIKKGDILHFF 118
NN+KV A++ G + + + +I L + W V P++ ++ G+ ++F
Sbjct: 58 LNNSKVFPAKIFGQK----EKTDAKIEVFLLRVLNREAGLWDVLVDPARKVRVGNKIYF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ + A V+D + + F ++ + +G +PLPPY RK D
Sbjct: 113 ----EEDVVAEVVDNTTSRGRTIRFLNPETDVFSLVDRIGNVPLPPYFTRK--SKETDKE 166
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
+YQT YA G+V AP AG+HFT L+ ++ +G+K+ +TLH TF ++VED H
Sbjct: 167 NYQTVYASQTGAVVAPMAGMHFTMPLIQKIQKLGVKILPITLHPSLSTFHAIEVEDVSKH 226
Query: 239 IMHSEIGFIDAPTAQALNSVK-SRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
M SE I TA +N K + GR+++VGTT+ R+LE T DG I G+T+ FI
Sbjct: 227 KMDSEYFNIPYQTAMEINETKIKKNGRVIAVGTTTCRVLEANATVDGKIKFGQGWTDKFI 286
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
P Y+F+ D L++NF P++TLLM+VSAF Y+ A+ YRF +YGD +
Sbjct: 287 YPPYQFKVTDALITNFQQPETTLLMVVSAFAEHRFLMDSYKTALKSDYRFLAYGDAMFI 345
>gi|238026275|ref|YP_002910506.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia glumae BGR1]
gi|237875469|gb|ACR27802.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia glumae BGR1]
Length = 350
Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats.
Identities = 142/363 (39%), Positives = 194/363 (53%), Gaps = 21/363 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDFDLPP IA + R ++RL+ V + P + D ++LP L + D +VF
Sbjct: 3 KLSDFDFDLPPELIAQTALPERSASRLLEV-GGTAGPARLVDRRFTELPDCLAAGDLLVF 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKV+ A+ G + I + P + R SK G L
Sbjct: 62 NDTKVLKARFFGQKAS-----GGRIEVLIERVTGPRTALAQIRASKSPAAGATLTLADA- 115
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
E TV ++ L + I G +PLPPYI DA D YQ
Sbjct: 116 ----FEVTVGERVEPFFTLHFPD----DCLTLIERHGRLPLPPYIEHD--PDATDETRYQ 165
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A G+VAAPTAGLHF LL+ L + G++ +TLHVGAGTF PV+V++ DH MH
Sbjct: 166 TVFASNPGAVAAPTAGLHFDEALLATLRARGVETATLTLHVGAGTFQPVRVDNIADHRMH 225
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSL----RLLETATTEDGIINPWSGFTNIFI 297
SE + + + + ++RGGR+++VGTTS+ A + T+IFI
Sbjct: 226 SEWYELTDALVERIAATRARGGRVIAVGTTSMRALEAAARDAEAAGRPLAATRAETDIFI 285
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFR VD L++NFHLPKSTLLMLVSAF GIE + Y+HAI+ YRF+SYGD LL
Sbjct: 286 TPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGIEPIRAAYRHAIAERYRFFSYGDAMLLT 345
Query: 358 QKR 360
++
Sbjct: 346 RRE 348
>gi|256830483|ref|YP_003159211.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Desulfomicrobium baculatum DSM 4028]
gi|256579659|gb|ACU90795.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Desulfomicrobium baculatum DSM 4028]
Length = 361
Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats.
Identities = 131/369 (35%), Positives = 203/369 (55%), Gaps = 31/369 (8%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +DFDLP ++IA P R ++RL+V+ + D + +D+P L + +V
Sbjct: 9 NLQSYDFDLPEAQIAQDPTAKRGASRLLVLDRKSGT---VRDAMFADIPELLPTGALLVV 65
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRV------------SPNSWSVYARPSKVI 109
NNTKV+ A+L G + ++ L + + + SK
Sbjct: 66 NNTKVLPARLIGRKES-----GGKVEFLLLTPLTLIEAKTAADGTKTATAEGLLKASKGP 120
Query: 110 KKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARK 169
++GD+L F +E V++K G + +G +L G IPLPPYI R+
Sbjct: 121 RQGDLLLFPG------IELRVLEKGEFGRARVTLRWTG-DLAEHFLSQGHIPLPPYIHRE 173
Query: 170 RPIDARDYVDYQTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
+ D YQT Y++ GSVAAPTAGLHFT +++ L GI++ VTL+VG GTF
Sbjct: 174 --DKSEDRTRYQTVYSREDKLGSVAAPTAGLHFTPEIMASLAQQGIQLAEVTLYVGYGTF 231
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN 287
PV+ +D +H+MH+E + TA+A+ KS G +++VGTT+ R LE+ + G I
Sbjct: 232 SPVRCDDIREHVMHAEYAEVPEETARAIAKAKSEGRPVIAVGTTTSRTLESMASALGEIG 291
Query: 288 PWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
P+ G+T+IFI PGY F+ VD L++NFHLP+S+L+++V G ++ Y HAI +RF
Sbjct: 292 PFKGWTDIFIHPGYEFKVVDQLITNFHLPRSSLIIMVCTLAGRQQIIDAYNHAIKQGFRF 351
Query: 348 YSYGDTSLL 356
+SYGD L+
Sbjct: 352 FSYGDAMLI 360
>gi|194336675|ref|YP_002018469.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Pelodictyon
phaeoclathratiforme BU-1]
gi|194309152|gb|ACF43852.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Pelodictyon
phaeoclathratiforme BU-1]
Length = 346
Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats.
Identities = 118/359 (32%), Positives = 187/359 (52%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F + LP ++IA P PR ++MV++ I + D+ ++ D +V
Sbjct: 1 MRLSNFRYTLPKTKIADEPASPRGKCKMMVLNRRKKD---IEHKVFEDIVSYFKKGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
NN++V A++ G + + + +I L ++ W V P++ ++ G+ ++F
Sbjct: 58 LNNSRVFPAKIFGQK----EKTDAKIEVFLLRVLNKEAGLWDVLVDPARKVRVGNKIYF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ + A V+D + + F I++ + +G IPLPPY RP D
Sbjct: 113 ----EEDVVAEVVDNTTSRGRTIRFLNPDIDVFSLVERIGNIPLPPYFT--RPPRESDKE 166
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
+YQT YA G+V AP AGLHFT +L ++ IG+K+ +TLH TF ++VED H
Sbjct: 167 NYQTVYASETGAVVAPMAGLHFTMPILQKIQKIGVKILPITLHPSLSTFNAIEVEDVSKH 226
Query: 239 IMHSEIGFIDAPTAQALNSVKSRG-GRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
M SE I TA +N K GR+++VGTT+ R+LE T DG I G+T+ FI
Sbjct: 227 KMDSEYFNIPYQTAMEINETKVNKTGRVIAVGTTTCRVLEANATVDGKIKFGRGWTDKFI 286
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
P Y+F+ D L++NF P++TLLM VSAF + Y+ A+ Y+F +YGD +
Sbjct: 287 YPPYQFKVTDALLTNFQQPETTLLMTVSAFAEHRLLMEAYKTALKEDYQFLAYGDAMFI 345
>gi|58039882|ref|YP_191846.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Gluconobacter oxydans 621H]
gi|58002296|gb|AAW61190.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Gluconobacter oxydans 621H]
Length = 357
Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats.
Identities = 173/353 (49%), Positives = 225/353 (63%), Gaps = 15/353 (4%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
FDF+LP IA P PRDSA L+ V P L H++ DLP FL D ++ NNT
Sbjct: 18 FDFELPRDHIATEPARPRDSATLLHVRPGLPPDP----HVIRDLPDFLREGDLLIANNTA 73
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSR 125
VI AQL R E +I TL ++ SW AR S+ +K DILHF G
Sbjct: 74 VIRAQLAATR------GEAKIGLTLDRILANGSWHALARNSRKLKPQDILHF----GDDP 123
Query: 126 LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYA 185
+ ATVI+ G + + FS+ G E + + VG + LPPYI R +D DY+T ++
Sbjct: 124 VTATVIENEGDGAVSIRFSVEGDEFDAFLERVGALALPPYIERPFGPTKQDDADYRTIFS 183
Query: 186 KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIG 245
+ +G+VAAPTAGLHFT +L+ L + GI+ +TLHVGAGTF+PV+ +H MH+E G
Sbjct: 184 QYRGAVAAPTAGLHFTPEVLAALDAKGIQRRTLTLHVGAGTFLPVRS-TIAEHKMHAEWG 242
Query: 246 FIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRA 305
IDA TA A+N ++RGGRIV+VGTTSLRLLE+A EDG + PW G T+IFI PGYRF+A
Sbjct: 243 EIDAETAAAINETRARGGRIVAVGTTSLRLLESAAREDGTVAPWRGETSIFIKPGYRFKA 302
Query: 306 VDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
VD+LM+NFHLP+STL MLV AF G E ++ Y +AI++ RFYSYGD LL +
Sbjct: 303 VDVLMTNFHLPRSTLFMLVCAFSGTETMREAYAYAIANGLRFYSYGDACLLER 355
>gi|209520460|ref|ZP_03269220.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Burkholderia sp. H160]
gi|209499105|gb|EDZ99200.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Burkholderia sp. H160]
Length = 352
Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats.
Identities = 140/364 (38%), Positives = 196/364 (53%), Gaps = 22/364 (6%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVIS--DHLVSDLPAFLNSNDAI 59
+ +FDFDLPP IA + R ++RL+ V + D ++LP + + D +
Sbjct: 3 TLSDFDFDLPPELIAQVALPERSASRLLEVDTAGAADGAARLIDRRFTELPDCIAAGDLL 62
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFN+TKV+ A+ G + ++ + S S R SK + G +
Sbjct: 63 VFNDTKVLKARFFGQKAS-----GGKVEVLVERLTSERSALAQIRASKSPQAGTTIRLAD 117
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ TV ++ + L + I G +PLPPYI DA D
Sbjct: 118 A-----FDVTVGERVDQFYTLHFPD----DCLMLIEQYGRLPLPPYIEHD--PDATDETR 166
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A+ G+VAAPTAGLHF LL+RL + G++ +TLHVGAGTF PV+VE+ +H
Sbjct: 167 YQTVFAQNPGAVAAPTAGLHFDDGLLARLDAHGVERATLTLHVGAGTFQPVRVENLAEHK 226
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSL----RLLETATTEDGIINPWSGFTNI 295
MHSE + A + + K+RG R+++VGTTS+ A + S T+I
Sbjct: 227 MHSEWYHLPQALADKIAATKARGNRVIAVGTTSMRALEAAARDAEAAGHPLAAASAETDI 286
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI YRF+SYGD L
Sbjct: 287 FITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIRAAYRHAIEERYRFFSYGDAML 346
Query: 356 LFQK 359
L ++
Sbjct: 347 LTRR 350
>gi|296161046|ref|ZP_06843857.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Burkholderia sp. Ch1-1]
gi|295888745|gb|EFG68552.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Burkholderia sp. Ch1-1]
Length = 352
Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats.
Identities = 138/365 (37%), Positives = 197/365 (53%), Gaps = 22/365 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSC--PLVISDHLVSDLPAFLNSNDA 58
+ + +FDFDLPP IA + R ++RL+ V P + D ++LP + + D
Sbjct: 2 LTLSDFDFDLPPELIAQVALPERSASRLLEVDNPAGATGPARLIDRRFAELPDCIAAGDL 61
Query: 59 IVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
+VFN+TKV+ A+ G + +I + + R SK + G +
Sbjct: 62 LVFNDTKVLKARFLGQKAS-----GGKIEVLVERLTGERTALAQIRASKSPQPGATIRLA 116
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ T+ ++ L + I G +PLPPYI DA D
Sbjct: 117 DA-----FDVTIGERVEPFYTLHFP----GDCLTLIEQFGRLPLPPYIEHD--PDATDET 165
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT +A+ G+VAAPTAGLHF LL+RL + G++ +TLHVGAGTF PV+VE+ +H
Sbjct: 166 RYQTVFAQNPGAVAAPTAGLHFDEALLARLDARGVERATLTLHVGAGTFQPVRVENLAEH 225
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSL----RLLETATTEDGIINPWSGFTN 294
MHSE + A + + ++RG R+++VGTTS+ A + S T+
Sbjct: 226 KMHSEWYHLPQSLADKIGATRARGNRVIAVGTTSMRALEAAARDAEAAGRPLAAASTETD 285
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFITPGYRFR VD L++NFHLPKSTLLMLVSAF G+E ++ Y+HAI YRF+SYGD
Sbjct: 286 IFITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIREAYRHAIEARYRFFSYGDAM 345
Query: 355 LLFQK 359
LL ++
Sbjct: 346 LLTRR 350
>gi|256827668|ref|YP_003151627.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Cryptobacterium curtum DSM 15641]
gi|256583811|gb|ACU94945.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Cryptobacterium curtum DSM 15641]
Length = 358
Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats.
Identities = 124/368 (33%), Positives = 181/368 (49%), Gaps = 23/368 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+DLP RIA P RD +++V+ + D + D+ ++N D +V
Sbjct: 1 MKTSDFDYDLPEERIAQEPAPIRDKCKMLVMDRITGA---LEDKIFCDIIDYINPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS-------WSVYARPSKVIKKGD 113
N T+V+ A+L G + L + W V RP K +K G
Sbjct: 58 ANETRVLPARLLGAKRT----TGGAAEVFLLRPLPHGQQNNTQSDWEVLVRPGKRLKPGA 113
Query: 114 ILHFFSQDGQSRLEATVIDKWNTG--EILLVFSISGI-ELERQISLVGTIPLPPYIARKR 170
I+ F S +G + L A ++ +G E + S L+ + VG PLPPYI +
Sbjct: 114 IIDFPSTNGSTALTAEIVGFVESGKGERIARLSTEAYSTLDEALHAVGHTPLPPYIKQYV 173
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
D YQT Y+ + S AAPTAGLHFT L+ + + G + V L VG TF V
Sbjct: 174 G----DEEMYQTVYSNRETSAAAPTAGLHFTPELIEAIKAKGARWETVELQVGIDTFRIV 229
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINP 288
+D +H MH+E + A N RGGR+++VGTTS R LE+A ++
Sbjct: 230 DEDDPRNHAMHTETYTVPQRVVDACNEAHQRGGRVIAVGTTSTRSLESAWDVETHQLVAR 289
Query: 289 WSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
T +F+ PG F +D L++NFH+P+STL+MLVSAF + Y+HAI + YR
Sbjct: 290 DQAQTALFLLPGSNFHVIDALITNFHVPRSTLMMLVSAFSSRDAIMAAYRHAIDNKYRML 349
Query: 349 SYGDTSLL 356
S+GD +
Sbjct: 350 SFGDAMFI 357
>gi|312880164|ref|ZP_07739964.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Aminomonas
paucivorans DSM 12260]
gi|310783455|gb|EFQ23853.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Aminomonas
paucivorans DSM 12260]
Length = 355
Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats.
Identities = 138/359 (38%), Positives = 190/359 (52%), Gaps = 22/359 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
V + +DLP IA P PRDS+RL+V+ DL +L D +V N
Sbjct: 15 VSAYQYDLPEELIAQDPAEPRDSSRLLVLERGRGVAA---HRTFRDLEEYLREGDLLVLN 71
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFFSQ 120
+T+V A+L + + + + P N W+ RP + + G L
Sbjct: 72 DTRVRPARLRARKTSS-----GRVEILVLRPLDPASNLWTALVRPGRRVPPGTPLLL--- 123
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ E V ++ G L + R +G +PLPPYI R Y
Sbjct: 124 --EDGTEVRVEERLEDGLRALRLPQE-TDPTRLFRRLGEVPLPPYITRSVAP----AERY 176
Query: 181 QTTYAK--IQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
QT Y++ +GS AAPTAGLHFT+ LL RL + GI FVTL VG GTF PV+ E +DH
Sbjct: 177 QTVYSRPDREGSAAAPTAGLHFTAPLLKRLEARGIGQAFVTLDVGLGTFRPVQTERAEDH 236
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
+MH E + TA+A+ + RGGR+V+VGTT +R LET E+G + P T ++I
Sbjct: 237 VMHLERCSLGEETAEAIRQTRRRGGRVVAVGTTVVRTLETFANEEGQVLPGERDTRLYIR 296
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGYRFR VD L++NFHLP+STLLMLV+AF G E + Y+ A+ YRF+S+GD +L
Sbjct: 297 PGYRFRVVDGLITNFHLPRSTLLMLVAAFGGYEPVLEAYREAVQLRYRFFSFGDAMILL 355
>gi|67458722|ref|YP_246346.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
felis URRWXCal2]
gi|75536818|sp|Q4UMM7|QUEA_RICFE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|67004255|gb|AAY61181.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
felis URRWXCal2]
Length = 367
Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats.
Identities = 142/388 (36%), Positives = 219/388 (56%), Gaps = 51/388 (13%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA P RD++ L++ ++ +L D +V
Sbjct: 1 MKLSDFDFDLPTELIAQYPASERDNSDLLI------ATTPPIKTKFYNIIDYLKEGDLLV 54
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KVI A+LN E+ I+ L+ ++S +SWS +A+P++ + GD +
Sbjct: 55 FNNSKVIKAKLN---------LERNITINLNQKLSDDSWSAFAKPARKLNIGDEFY---- 101
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKR---------- 170
+ + +K+ GEI + F + I + + G +PLP YI R +
Sbjct: 102 --SDNHKVIITEKFAMGEIKVKFELDNISVFEFLDKYGEMPLPVYIRRSKRHGEEEESSD 159
Query: 171 -------------------PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISI 211
D D + YQT Y++I+GSVAAPTAGLHFT +L +L +
Sbjct: 160 EAISSQNPEIATESKRTPSNDDKLDSLRYQTIYSQIEGSVAAPTAGLHFTKEILDKLKAK 219
Query: 212 GIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTT 271
G+++ FVTLHVGAGTF+PVK E+ +H +H+E I TA+ +N K RI++VGTT
Sbjct: 220 GVQIAFVTLHVGAGTFLPVKTENIHEHKIHTEYCSITPETAEIINKAKQERRRIIAVGTT 279
Query: 272 SLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIE 331
+LR LE+ + +G++ S T+IFITPG++F+ D+L++NFH PKSTL ML+ AF G +
Sbjct: 280 TLRTLES-SCNNGVVKAGSFETDIFITPGFKFQTTDMLLTNFHFPKSTLFMLICAFAGFK 338
Query: 332 ETKKMYQHAISHAYRFYSYGDTSLLFQK 359
E ++Y++AI RF+SYGD ++L++K
Sbjct: 339 EMHELYKYAIKEKMRFFSYGDATVLYRK 366
>gi|258648186|ref|ZP_05735655.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
tannerae ATCC 51259]
gi|260852070|gb|EEX71939.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
tannerae ATCC 51259]
Length = 349
Score = 399 bits (1027), Expect = e-109, Method: Composition-based stats.
Identities = 122/361 (33%), Positives = 180/361 (49%), Gaps = 16/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F+F LP +IA P RD R+MV+ I +L + + D V
Sbjct: 1 MKLSQFNFKLPAEKIAKYPSPLRDDCRMMVLDKTTGK---IEHRKFDELLDYFDEKDLFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FN+TKV A+L G + + I L ++ W V P++ I+ G+ L+F
Sbjct: 58 FNDTKVFPARLYGNK----EKTGARIEVFLLRELNQELRLWDVLVDPARKIRIGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
+ + A VID + L F G E +R + +G P+P I RP + D
Sbjct: 114 EDN---SIVAEVIDNTTSRGRTLRFLYDGDHEEFKRSLYALGEAPIPREIN--RPTEPED 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
+QT +A+ +G+V AP AGLHF+ ++ ++ GI ++TLH G G + VED
Sbjct: 169 LERFQTIFARNEGAVTAPGAGLHFSKVMMKKMELKGIDAAYLTLHCGLGNYRTTDVEDLT 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H M SE F+DA + +NS + +I++VG+T +R LE DG I + G+TN F
Sbjct: 229 KHKMESEQMFVDAKCCRHVNSAQDANRKILAVGSTVMRALEVCVGPDGHIKEFEGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F D ++ NF P STLLML SAF G ++ Y+ AI Y F YGD L+
Sbjct: 289 IFPPYEFSVADAMLVNFQFPYSTLLMLASAFGGYDQVMGAYKEAIKGEYMFGPYGDAMLI 348
Query: 357 F 357
Sbjct: 349 I 349
>gi|110598218|ref|ZP_01386494.1| Queuosine biosynthesis protein [Chlorobium ferrooxidans DSM 13031]
gi|110340133|gb|EAT58632.1| Queuosine biosynthesis protein [Chlorobium ferrooxidans DSM 13031]
Length = 346
Score = 399 bits (1027), Expect = e-109, Method: Composition-based stats.
Identities = 122/359 (33%), Positives = 189/359 (52%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F + LP ++IA +P PRD RLMV++ I + D+ ++ D ++
Sbjct: 1 MRLSNFRYTLPKTKIADQPTEPRDKCRLMVLNRRKKD---IDHKMFDDIVSYFKKGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
NN++V A++ G + + + +I L ++ W V P++ ++ G+ ++F
Sbjct: 58 LNNSRVFPAKIFGQK----EKTDAKIEVFLLRVLNKEAGLWDVLVDPARKVRVGNKIYF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ + A V+D + + F I++ + +G IPLPPY RP D
Sbjct: 113 ----EEDVVAEVVDNTTSRGRTIRFLNPEIDVFSLVERIGNIPLPPYFT--RPPVESDKE 166
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
+YQT YA G+V AP AGLHFT LL ++ IG+K+ +TLH TF ++VED H
Sbjct: 167 NYQTVYASQTGAVVAPMAGLHFTMPLLQKIQKIGVKILPITLHPSLSTFNAIEVEDVSKH 226
Query: 239 IMHSEIGFIDAPTAQALNSVKSRG-GRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
M SE I TA +N K GRI++VGTT+ R+LE T DG I G+T+ FI
Sbjct: 227 KMDSEYFNIPYQTAMEINETKVNKTGRIIAVGTTTCRVLEANATVDGKIKFGRGWTDKFI 286
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
P Y+F+ D L++NF P++TLLM VSAF + Y+ A+ Y+F +YGD +
Sbjct: 287 YPPYQFKVTDALLTNFQQPETTLLMAVSAFAEHRLLMEAYKTALKGDYQFLAYGDAMFI 345
>gi|317488559|ref|ZP_07947104.1| tRNA ribosyltransferase-isomerase [Eggerthella sp. 1_3_56FAA]
gi|316912301|gb|EFV33865.1| tRNA ribosyltransferase-isomerase [Eggerthella sp. 1_3_56FAA]
Length = 359
Score = 399 bits (1027), Expect = e-109, Method: Composition-based stats.
Identities = 132/369 (35%), Positives = 188/369 (50%), Gaps = 24/369 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+DLPP IA P RD RL+V++ + D + D+ +L ND +V
Sbjct: 1 MKTSDFDYDLPPELIAQEPAAERDGCRLLVMNRVTG---EVEDRVFRDIVDYLTPNDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------WSVYARPSKVIKKGD- 113
N T+V+ A+L G + L + + W V RP K +K G
Sbjct: 58 ANETRVMPARLLGAK----RGTGGAAEVFLLRQHGTPTENRSALWEVLVRPGKRLKPGTG 113
Query: 114 -ILHFFSQDGQSRLEATVIDKWNT---GEILLVFSISGIELERQISLVGTIPLPPYIARK 169
++ F G+ L A ++D GE L + L+ + VG PLPPYI
Sbjct: 114 AVVDFVDAVGEVALSAEIVDWLPDAQKGERLARLTTPLPSLDEALHAVGHTPLPPYIKDY 173
Query: 170 RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
A D YQT Y++ + S AAPTAGLHFT L+ RL G++ V L VG TF
Sbjct: 174 ----AGDEELYQTVYSRRESSAAAPTAGLHFTPALIERLREQGVRWETVELEVGLDTFRI 229
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINP 288
V +D H +H+E + T +A+ + RGGR+V+VGTTS+R LE+A + G + P
Sbjct: 230 VDEDDPTQHAIHTEYYTVPERTVEAIAETRERGGRVVAVGTTSVRSLESAWDDGTGAVTP 289
Query: 289 WSGFTN-IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
T +++ PG +F VD L++NFH+P+STL+MLVSAF E Y+HAI YR
Sbjct: 290 RDRETTSLYLLPGSQFHVVDALITNFHVPRSTLMMLVSAFSTREHIMAAYRHAIEERYRM 349
Query: 348 YSYGDTSLL 356
S+GD +
Sbjct: 350 LSFGDAMFI 358
>gi|85705247|ref|ZP_01036346.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseovarius
sp. 217]
gi|85670120|gb|EAQ24982.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Roseovarius
sp. 217]
Length = 362
Score = 399 bits (1027), Expect = e-109, Method: Composition-based stats.
Identities = 160/360 (44%), Positives = 219/360 (60%), Gaps = 13/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP + IA RP PR +ARL+V I+D V+DL +L D +V
Sbjct: 1 MKLSDFDFDLPEALIATRPARPRRAARLLVAEG-----AAITDAGVADLGRWLRPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHI--NRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L+G+R +I TL + +W +P K + G+ + F
Sbjct: 56 LNDTRVIPARLSGLRHRSGAQGDTAAKIEVTLLEPGAEGTWGALIKPLKKVSVGEEIVF- 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
RL A V++ G+ L F++ + + ++ G +PLPPYIA +RP D +D V
Sbjct: 115 ----SERLSA-VLEAKEEGQGRLRFNLRAEDFDAALAEAGAMPLPPYIAARRPADDQDKV 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LL+ L ++G+ VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVWARAPGAVAAPTASLHFDEALLAELAAMGVGFTHVTLHVGAGTFLPVKVEDVTSH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A + + ++ GGRI+ VGTT+LRL+ETA G I WSG T+IFI
Sbjct: 230 KMHAEWGEVSEEAAAEIAATRAAGGRIIPVGTTALRLIETAARATGEIAAWSGDTDIFIY 289
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ FR D LM+NFHLPKSTL+MLVSA G ++Y HA++ YRF+SYGD SLL
Sbjct: 290 PGFEFRVTDALMTNFHLPKSTLMMLVSALMGQGVIDRIYAHAVARGYRFFSYGDASLLIP 349
>gi|134294796|ref|YP_001118531.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia vietnamiensis G4]
gi|166216711|sp|A4JBP3|QUEA_BURVG RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|134137953|gb|ABO53696.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Burkholderia vietnamiensis G4]
Length = 353
Score = 399 bits (1027), Expect = e-109, Method: Composition-based stats.
Identities = 139/362 (38%), Positives = 195/362 (53%), Gaps = 21/362 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDF+LPP IA + R ++RL+ V P + D ++LP+ + D +VF
Sbjct: 3 TLSDFDFNLPPELIAQTALPERTASRLLEVDG-TVAPARLVDRRFAELPSCIARGDLLVF 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKV+ A+ G + +I + ++ R SK G L
Sbjct: 62 NDTKVLKARFFGQKAS-----GGKIEVLVERVTGTHTALAQIRASKSPGAGTTLRLADA- 115
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ TV ++ L F + L I G +PLPPYI DA D YQ
Sbjct: 116 ----FDVTVGERVEPF-FTLHFPQPCLTL---IEQYGRLPLPPYIEHD--ADATDETRYQ 165
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YA G+VAAPTAGLHF LL +L ++G++ +TLHVGAGTF PV+VE+ +H MH
Sbjct: 166 TVYASNPGAVAAPTAGLHFDQPLLEKLDAMGVERATLTLHVGAGTFQPVRVENIAEHRMH 225
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSL----RLLETATTEDGIINPWSGFTNIFI 297
SE + + + ++RGG +++VGTTS+ +A + T+IFI
Sbjct: 226 SEWYDLPQSLVDKIAATRARGGNVIAVGTTSMRALEAAARSAEAAGRPLAATQDETDIFI 285
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI YRF+SYGD LL
Sbjct: 286 TPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIRAAYRHAIDERYRFFSYGDAMLLT 345
Query: 358 QK 359
++
Sbjct: 346 RR 347
>gi|76810830|ref|YP_334741.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 1710b]
gi|76580283|gb|ABA49758.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 1710b]
Length = 372
Score = 399 bits (1027), Expect = e-109, Method: Composition-based stats.
Identities = 144/364 (39%), Positives = 198/364 (54%), Gaps = 21/364 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVH-PNLSCPLVISDHLVSDLPAFLNSNDAI 59
+ + +FDFDLPP IA + R ++RL+ V N S P + D ++LPA + D +
Sbjct: 14 LTLSDFDFDLPPELIAQTALPERSASRLLEVDNTNPSAPPRLVDRRFAELPACVAPGDLL 73
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFN+TKV+ A+ G + +I + + R SK G L
Sbjct: 74 VFNDTKVLKARFFGRKAS-----GGKIEVLIERVTGERTALAQIRASKSPPPGTTLTLAD 128
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ TV ++ L + I G +PLPPYI DA D
Sbjct: 129 A-----FDVTVGERVEPFFTLHFPD----DCLVLIERHGRLPLPPYIEH--APDAADETR 177
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H
Sbjct: 178 YQTVFAANPGAVAAPTAGLHFDDAVLAALEARGVERATLTLHVGAGTFQPVRVENLAEHR 237
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE----TATTEDGIINPWSGFTNI 295
MHSE + + + + ++RGGR+++VGTTS+R LE A + T+I
Sbjct: 238 MHSESYELTDALVEKIAATRARGGRVIAVGTTSMRALEAAARDAQAAGRPLAATRAETDI 297
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFR VD L++NFHLPKSTLLMLVSAF GIE + Y+HAI YRF+SYGD L
Sbjct: 298 FITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGIETIRAAYRHAIDARYRFFSYGDAML 357
Query: 356 LFQK 359
L ++
Sbjct: 358 LTRR 361
>gi|189349447|ref|YP_001945075.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia multivorans ATCC 17616]
gi|221202260|ref|ZP_03575294.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia multivorans CGD2M]
gi|221209150|ref|ZP_03582143.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia multivorans CGD2]
gi|189333469|dbj|BAG42539.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia multivorans ATCC 17616]
gi|221170968|gb|EEE03422.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia multivorans CGD2]
gi|221177834|gb|EEE10247.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia multivorans CGD2M]
Length = 355
Score = 399 bits (1027), Expect = e-109, Method: Composition-based stats.
Identities = 142/362 (39%), Positives = 196/362 (54%), Gaps = 21/362 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDF+LPP IA + R ++RL+ V + P D ++LPA + D +VF
Sbjct: 3 TLSDFDFNLPPELIAQTALPDRTASRLLEVD-ATAEPARFVDRRFAELPACIARGDLLVF 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKV+ A+ G + I + ++ R SK G L
Sbjct: 62 NDTKVLKARFFGQKAS-----GGRIEVLIERVTGSHTALAQIRASKSPGAGTTLRLADA- 115
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ TV ++ L F +EL I G +PLPPYI DA D YQ
Sbjct: 116 ----FDVTVGERVEPF-FTLHFPQPCLEL---IEQYGRLPLPPYIEHD--PDATDETRYQ 165
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YA G+VAAPTAGLHF LL++L ++GI+ +TLHVGAGTF PV+VE+ +H MH
Sbjct: 166 TVYASNPGAVAAPTAGLHFDEPLLAKLDAMGIERATLTLHVGAGTFQPVRVENIAEHKMH 225
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSL----RLLETATTEDGIINPWSGFTNIFI 297
SE + + + ++RGG++++VGTTS+ A + T+IFI
Sbjct: 226 SEWYELPQSLVDKIAATRARGGKVIAVGTTSMRALEAAARDAEAAGRPLAATQAETDIFI 285
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFR VD L++NFHLPKSTL+MLVSAF GIE + Y+HAI YRF+SYGD LL
Sbjct: 286 TPGYRFRVVDRLVTNFHLPKSTLMMLVSAFAGIETIRAAYRHAIEQRYRFFSYGDAMLLT 345
Query: 358 QK 359
++
Sbjct: 346 RR 347
>gi|221214465|ref|ZP_03587436.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia multivorans CGD1]
gi|221165722|gb|EED98197.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia multivorans CGD1]
Length = 355
Score = 399 bits (1027), Expect = e-109, Method: Composition-based stats.
Identities = 142/362 (39%), Positives = 196/362 (54%), Gaps = 21/362 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDF+LPP IA + R ++RL+ V + P D ++LPA + D +VF
Sbjct: 3 TLSDFDFNLPPELIAQTALPDRTASRLLEVD-ATAEPARFVDRRFAELPACIARGDLLVF 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKV+ A+ G + I + ++ R SK G L
Sbjct: 62 NDTKVLKARFFGQKAS-----GGRIEVLIERVTGSHTALAQIRASKSPGAGTTLRLADA- 115
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ TV ++ L F +EL I G +PLPPYI DA D YQ
Sbjct: 116 ----FDVTVGERVEPF-FTLHFPQPCLEL---IEQYGRLPLPPYIEHD--PDATDETRYQ 165
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YA G+VAAPTAGLHF LL++L ++GI+ +TLHVGAGTF PV+VE+ +H MH
Sbjct: 166 TVYASNPGAVAAPTAGLHFDEPLLAKLDAMGIERATLTLHVGAGTFQPVRVENIAEHKMH 225
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSL----RLLETATTEDGIINPWSGFTNIFI 297
SE + + + ++RGG++++VGTTS+ A + T+IFI
Sbjct: 226 SEWYELPQSLVDKIAAARARGGKVIAVGTTSMRALEAAARDAEAAGRPLAATQAETDIFI 285
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFR VD L++NFHLPKSTL+MLVSAF GIE + Y+HAI YRF+SYGD LL
Sbjct: 286 TPGYRFRVVDRLVTNFHLPKSTLMMLVSAFAGIETIRAAYRHAIEQRYRFFSYGDAMLLT 345
Query: 358 QK 359
++
Sbjct: 346 RR 347
>gi|149926708|ref|ZP_01914968.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Limnobacter
sp. MED105]
gi|149824637|gb|EDM83853.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Limnobacter
sp. MED105]
Length = 362
Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats.
Identities = 149/373 (39%), Positives = 197/373 (52%), Gaps = 32/373 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EFDF+LP IA P R +RL+V N I D L + L ND +V
Sbjct: 5 MKLSEFDFNLPEQLIAQHPPEIRGESRLLVCENNK----PIEDRLFEHVLNLLGPNDVLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G + +I L + ++ R SK K G +
Sbjct: 61 INDTKVLKARLQGHKAS-----GGKIEVMLERILDDKRFTAMIRASKSPKPGSEVVL--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+A V+ K + L + S + G +PLPPYI +A+D Y
Sbjct: 113 --AGVAKARVLSKHDMMYELELLESSLSL-PDLLDAHGALPLPPYIEHN--ANAQDDERY 167
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHFT LL ++ + G+K+ +TLHVGAGTF+PVK ++ D+H+M
Sbjct: 168 QTVFAREPGAVAAPTAGLHFTEQLLQQVQARGVKLLNLTLHVGAGTFLPVKTDNVDEHVM 227
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-INP----------- 288
HSE I A+ K GGR+V+VGTTSLR LE TE G +N
Sbjct: 228 HSERYAISGAVIAAMIKAKENGGRVVAVGTTSLRALEAWATETGCNLNTTEGVGKAAEFA 287
Query: 289 ---WSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAY 345
+G T IFI PGY F+ VD L++NFHLPKSTLLMLVSAF G Y HAI+ Y
Sbjct: 288 RSGHAGDTQIFIKPGYTFKVVDRLITNFHLPKSTLLMLVSAFAGKTNILNAYAHAIAQQY 347
Query: 346 RFYSYGDTSLLFQ 358
RF+SYGD L +
Sbjct: 348 RFFSYGDAMWLER 360
>gi|167586186|ref|ZP_02378574.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia ubonensis Bu]
Length = 354
Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats.
Identities = 137/363 (37%), Positives = 196/363 (53%), Gaps = 21/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FDF LPP IA + R ++RL+ V N P + D ++LP+ + + D +V
Sbjct: 2 LTLSDFDFHLPPELIAQTALPDRTASRLLEVD-NTVAPARLVDRRFAELPSCIAAGDLLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKV+ A+ G + ++ + ++ R SK G L
Sbjct: 61 FNDTKVLKARFFGHKAS-----GGKVEVLIERVTGTHTALAQIRASKSPGPGTTLTLADA 115
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ TV ++ L F + L I G +PLPPYI DA D Y
Sbjct: 116 -----FDVTVGERVEPF-FTLHFPAPCLTL---IEQYGRLPLPPYIEHD--PDATDETRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA G+VAAPTAGLHF LL++L ++G++ +TLHVGAGTF PV+V++ +H M
Sbjct: 165 QTVYASNPGAVAAPTAGLHFDEPLLAKLDAMGVERATLTLHVGAGTFQPVRVDNLAEHKM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSL----RLLETATTEDGIINPWSGFTNIF 296
HSE + + + ++RGG +++VGTTS+ A + T+IF
Sbjct: 225 HSEWYELPQSLVDRIAATRARGGNVIAVGTTSMRALEAAARDADAAGRPLAATQAETDIF 284
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGY FR VD L++NFHLPKSTLLMLVSAF G+E + Y+HAI YRF+SYGD LL
Sbjct: 285 ITPGYAFRVVDRLVTNFHLPKSTLLMLVSAFAGVETIRAAYRHAIDERYRFFSYGDAMLL 344
Query: 357 FQK 359
++
Sbjct: 345 TRR 347
>gi|258593143|emb|CBE69454.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [NC10
bacterium 'Dutch sediment']
Length = 379
Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats.
Identities = 148/386 (38%), Positives = 201/386 (52%), Gaps = 42/386 (10%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +FD+ LPP IA PV RD +RL+V+ N + D + DLP +L D +V
Sbjct: 5 LRTVDFDYTLPPELIAQAPVPERDRSRLLVLDRNTGA---LHDRIFRDLPEYLVPGDLLV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN-------SWSVYARPSKVIKKGD 113
N KVI A+L G R + E+ + V P+ W +PS+ ++ GD
Sbjct: 62 INEAKVIPARLFGRSER---RHQIEVLLLYEVEVDPDMGPAGTDRWEALIKPSRQVRIGD 118
Query: 114 ILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKR--- 170
L + A VI+K G LL G L + G +P+PPYI R+
Sbjct: 119 RLALADD----TITAEVIEKRGEGRHLLKLVYDG-RLADLLWRFGRMPVPPYIKRQGIGY 173
Query: 171 -----------PIDA---------RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLIS 210
P+D D YQT YAK +G+VAAPTAGLHFT +L+ L
Sbjct: 174 RVEGLEQGFPSPLDPGPYLLDPNTLDRERYQTVYAKHEGAVAAPTAGLHFTPDLIETLTR 233
Query: 211 IGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGT 270
GI V +TL VG GTF PV++++ H M E I TA A+ + + G R+++VGT
Sbjct: 234 QGIAVTPITLFVGPGTFRPVRMKEVAQHRMEPERYIIPEQTALAVKAARREGRRVIAVGT 293
Query: 271 TSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGI 330
T++R LE A T G I G T++FI PGYRF ++D +++NFHLP STL MLVSAF G
Sbjct: 294 TTVRTLEHA-TVMGEIRAGVGLTDLFIYPGYRFTSIDAIITNFHLPCSTLFMLVSAFAGR 352
Query: 331 EETKKMYQHAISHAYRFYSYGDTSLL 356
E Y+ AI+ YRFYSYGD L+
Sbjct: 353 ETMLAAYREAIARCYRFYSYGDAMLI 378
>gi|126440122|ref|YP_001060337.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 668]
gi|126455279|ref|YP_001067597.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 1106a]
gi|226198380|ref|ZP_03793949.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei Pakistan 9]
gi|237813725|ref|YP_002898176.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei MSHR346]
gi|242314533|ref|ZP_04813549.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 1106b]
gi|254191552|ref|ZP_04898055.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei Pasteur 52237]
gi|254259794|ref|ZP_04950848.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 1710a]
gi|91207415|sp|Q3JNW2|QUEA_BURP1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|166216709|sp|A3NZ26|QUEA_BURP0 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|166216710|sp|A3NDB6|QUEA_BURP6 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|126219615|gb|ABN83121.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 668]
gi|126228921|gb|ABN92461.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 1106a]
gi|157939223|gb|EDO94893.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei Pasteur 52237]
gi|225929563|gb|EEH25581.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei Pakistan 9]
gi|237503197|gb|ACQ95515.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei MSHR346]
gi|242137772|gb|EES24174.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 1106b]
gi|254218483|gb|EET07867.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 1710a]
Length = 360
Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats.
Identities = 144/364 (39%), Positives = 198/364 (54%), Gaps = 21/364 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVH-PNLSCPLVISDHLVSDLPAFLNSNDAI 59
+ + +FDFDLPP IA + R ++RL+ V N S P + D ++LPA + D +
Sbjct: 2 LTLSDFDFDLPPELIAQTALPERSASRLLEVDNTNPSAPPRLVDRRFAELPACVAPGDLL 61
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFN+TKV+ A+ G + +I + + R SK G L
Sbjct: 62 VFNDTKVLKARFFGRKAS-----GGKIEVLIERVTGERTALAQIRASKSPPPGTTLTLAD 116
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ TV ++ L + I G +PLPPYI DA D
Sbjct: 117 A-----FDVTVGERVEPFFTLHFPD----DCLVLIERHGRLPLPPYIEH--APDAADETR 165
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H
Sbjct: 166 YQTVFAANPGAVAAPTAGLHFDDAVLAALEARGVERATLTLHVGAGTFQPVRVENLAEHR 225
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE----TATTEDGIINPWSGFTNI 295
MHSE + + + + ++RGGR+++VGTTS+R LE A + T+I
Sbjct: 226 MHSESYELTDALVEKIAATRARGGRVIAVGTTSMRALEAAARDAQAAGRPLAATRAETDI 285
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFR VD L++NFHLPKSTLLMLVSAF GIE + Y+HAI YRF+SYGD L
Sbjct: 286 FITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGIETIRAAYRHAIDARYRFFSYGDAML 345
Query: 356 LFQK 359
L ++
Sbjct: 346 LTRR 349
>gi|312795166|ref|YP_004028088.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia rhizoxinica HKI 454]
gi|312166941|emb|CBW73944.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)
[Burkholderia rhizoxinica HKI 454]
Length = 359
Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats.
Identities = 135/361 (37%), Positives = 193/361 (53%), Gaps = 24/361 (6%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDFDLPP IA + R ++RL+ V P+ + D +LPA L D +VF
Sbjct: 12 TLSDFDFDLPPELIAQHALPERSASRLLEVTPS----GALLDRHFGELPACLEPGDLLVF 67
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKV+ A+ +G++ + + P + R SK G +
Sbjct: 68 NDTKVLKARFDGIKAS-----GGRVEVLIERVTGPRTALAQIRASKRPAPGSTIRLADA- 121
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ TV ++ L + I G +PLPPYI D D YQ
Sbjct: 122 ----FDVTVGERVEPFHTLHFPH----DCIELIDQHGRLPLPPYIEH--TPDTYDEARYQ 171
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A G+VAAPTAGLHF + L+ L + G++ +TLHVGAGTF PV+ +D H MH
Sbjct: 172 TVFATTPGAVAAPTAGLHFDAPTLAALDARGVRRATLTLHVGAGTFQPVRTDDIAQHKMH 231
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT----TEDGIINPWSGFTNIFI 297
SE I +A+ + ++ +++VGTTS+R LE A + ++ T+IFI
Sbjct: 232 SEWYNIPPALVEAIEATRAAKRSVIAVGTTSMRALEAAARDAERDGRELHAVRAETDIFI 291
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGY FR +D L++NFHLPKSTLLMLVSAF G+E ++ Y+HAI+ YRF+SYGD LL
Sbjct: 292 TPGYPFRVIDRLVTNFHLPKSTLLMLVSAFAGVEPIRRAYRHAIAQRYRFFSYGDAMLLT 351
Query: 358 Q 358
+
Sbjct: 352 R 352
>gi|291288355|ref|YP_003505171.1| S-adenosylmethionine/ tRNA-ribosyltransferase-isomerase
[Denitrovibrio acetiphilus DSM 12809]
gi|290885515|gb|ADD69215.1| S-adenosylmethionine/ tRNA-ribosyltransferase-isomerase
[Denitrovibrio acetiphilus DSM 12809]
Length = 341
Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats.
Identities = 124/357 (34%), Positives = 198/357 (55%), Gaps = 24/357 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++DFDLP IA P R +++L+VV+ + D + +D+ ++ N +V N
Sbjct: 8 ISDYDFDLPEELIAQYPAEKRGTSKLLVVNGE-----ALYDKIFTDIVDLIDENSFLVIN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
TKV+ A+L G + ++ + + S A +K+G +++
Sbjct: 63 TTKVMKARLYGTKP-----TGGQVEILVLEKTSER--ICTAITKGKVKEGTVVNI----- 110
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
A + + + G ++ F ++ + G +PLPPYI R+ +D YQT
Sbjct: 111 -PPFRAVITEILDDGSRVIEFD---TDVSDVMDKCGHMPLPPYITRE--DTKKDTDRYQT 164
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
Y+K +GSVAAPTAGLHFT +++ L + GI+V VTL++G GTF PVK + +DH MH+
Sbjct: 165 IYSKDEGSVAAPTAGLHFTPEIMNALKAKGIEVLEVTLNIGIGTFRPVKADYLEDHDMHT 224
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E +I T+ +NS+ G ++V+VGTT++R LE+A E+G + G T +FI PGY
Sbjct: 225 EKYYISEETSDRINSLLKEGKKLVAVGTTAVRALESAA-ENGEVQAGYGETKLFIKPGYD 283
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
F+ + L++NFHLPKSTL +LVS G Y+HA ++ Y+F+SYGD + K
Sbjct: 284 FKVISSLITNFHLPKSTLFVLVSQLAGRRNMLNAYEHAKANGYKFFSYGDAMFISTK 340
>gi|320354867|ref|YP_004196206.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Desulfobulbus propionicus DSM 2032]
gi|320123369|gb|ADW18915.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Desulfobulbus propionicus DSM 2032]
Length = 367
Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats.
Identities = 135/373 (36%), Positives = 193/373 (51%), Gaps = 28/373 (7%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +D+DLPP RIA P RD +RL+V+ N + +D+ L +D +V
Sbjct: 7 RLDAYDYDLPPERIAQFPEPQRDHSRLLVLDTN---VPELVHRRFADIVDHLRPSDLLVI 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVS------------PNSWSVYARPSKVI 109
N+TKV A+L G + ++ L + + + SK
Sbjct: 64 NSTKVFPARLLGRKE-----TGGKVELFLLNFPHSPTTTDPTSSWHEATATALLKSSKRP 118
Query: 110 KKGDILHFFSQDGQSRLEATVIDKWNTG--EILLVF-SISGIELERQISLVGTIPLPPYI 166
K G L F + A V G E+ L + G L+ + G +PLPPYI
Sbjct: 119 KVGGSLLF-----DEQFHARVDALLGDGKAEVTLRYRPAPGQSLQDLLERHGQMPLPPYI 173
Query: 167 ARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGT 226
R D YQT YA GSVAAPTAGLHF+ LL+++ + + + + LHVG GT
Sbjct: 174 DRPNGNVEEDLHRYQTRYASQVGSVAAPTAGLHFSDALLAQIRAKRVDIAPLVLHVGYGT 233
Query: 227 FMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII 286
F PV+ ED +H +H E I A TA +N K+ GGRI +VGTT++R LE A + G +
Sbjct: 234 FAPVRSEDIREHRIHREWVEIPAATAAKVNQTKAAGGRIWAVGTTTVRSLEFAADQHGQV 293
Query: 287 NPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYR 346
P + ++FI PG++FR +D L++NFHLPKS+LL LVSA G + Y+ AI+ +YR
Sbjct: 294 QPGASECDLFIYPGFQFRVIDNLITNFHLPKSSLLFLVSALAGRQRILAAYKEAIASSYR 353
Query: 347 FYSYGDTSLLFQK 359
F+SYGD + K
Sbjct: 354 FFSYGDAMAIVTK 366
>gi|325474824|gb|EGC78010.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Treponema
denticola F0402]
Length = 347
Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats.
Identities = 136/361 (37%), Positives = 194/361 (53%), Gaps = 18/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+ KEF+FDLP IA P R RL+++ + D L ++LP L N +V
Sbjct: 1 MLTKEFNFDLPEELIAQSPSEKRGGDRLLILDKQSGK---LEDRLFTELPEILPKNALMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTL---HMRVSPNSWSVYARPSKVIKKGDILHF 117
FNN+KV A++ ++ + + W V A+ +K K G F
Sbjct: 58 FNNSKVRHARIYAK-----SKTNAVCEFLMINPMKDSDGSLWQVMAKKAKRQKPGKTFLF 112
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+E+ + + + I + + G +PLPPYI RK + D
Sbjct: 113 EDGTEAEIIESEIPLESEFRCMKFNRVID----DEWLDKYGHMPLPPYIHRK--DNQEDA 166
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YA+I GS+AAPTAGLHFT +LS++ GI + +VTLHVG GTF+PV+ E +D
Sbjct: 167 DRYQTVYAEIYGSIAAPTAGLHFTQEVLSKIRDKGIDIEYVTLHVGLGTFLPVRAEKIED 226
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIF 296
H MH E FI TAQA+ K G I++VGTT++R LE+A E + + T+IF
Sbjct: 227 HKMHREHFFISEKTAQAVEKAKKEGRPIIAVGTTTVRTLESAWDETRKELKRGNQSTDIF 286
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y+F+ +D L +NFH P+S+L+MLVSA G E K Y+HA+ Y+F+SYGD L+
Sbjct: 287 IYPSYKFKLIDKLFTNFHTPESSLVMLVSALAGKENIFKAYRHAVEEKYKFFSYGDAMLI 346
Query: 357 F 357
Sbjct: 347 L 347
>gi|217421123|ref|ZP_03452628.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 576]
gi|217396535|gb|EEC36552.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 576]
Length = 360
Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats.
Identities = 144/364 (39%), Positives = 197/364 (54%), Gaps = 21/364 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVH-PNLSCPLVISDHLVSDLPAFLNSNDAI 59
+ + +FDFDLPP IA + R ++RL+ V N S P + D ++LPA + D +
Sbjct: 2 LTLSDFDFDLPPELIAQTALPERSASRLLEVDNTNPSAPPRLVDRRFAELPACVAPGDLL 61
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFN+TKV+ A+ G + +I + + R SK G L
Sbjct: 62 VFNDTKVLKARFFGRKAS-----GGKIEVLIERVTGERTALAQIRASKSPPPGTTLTLAD 116
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ TV ++ L I G +PLPPYI DA D
Sbjct: 117 A-----FDVTVGERVEPFFTLHFPDNC----LVLIERHGRLPLPPYIEH--APDAADETR 165
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H
Sbjct: 166 YQTVFAANPGAVAAPTAGLHFDDAVLAALEARGVERATLTLHVGAGTFQPVRVENLAEHR 225
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE----TATTEDGIINPWSGFTNI 295
MHSE + + + + ++RGGR+++VGTTS+R LE A + T+I
Sbjct: 226 MHSESYELTDALVEKIAATRARGGRVIAVGTTSMRALEAAARDAQAAGRPLAATRAETDI 285
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFR VD L++NFHLPKSTLLMLVSAF GIE + Y+HAI YRF+SYGD L
Sbjct: 286 FITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGIETIRAAYRHAIDARYRFFSYGDAML 345
Query: 356 LFQK 359
L ++
Sbjct: 346 LTRR 349
>gi|304321743|ref|YP_003855386.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Parvularcula bermudensis HTCC2503]
gi|303300645|gb|ADM10244.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Parvularcula bermudensis HTCC2503]
Length = 356
Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats.
Identities = 155/366 (42%), Positives = 208/366 (56%), Gaps = 20/366 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FD+DLP +IAL P RD ARL++V PN L++ L +D ++
Sbjct: 1 MRVDLFDYDLPEEQIALVPPPERDGARLLIVPPN----GPFGHDLIAHLAEHFGPSDVLI 56
Query: 61 FNNTKVITAQLNGVRFC----HINRREKEISCTL----HMRVSPNSWSVYARPSKVIKKG 112
N+TKVI A L G+R + I TL R W + RP+K ++ G
Sbjct: 57 LNDTKVIPATLAGMRPARDVGGGDPAGVGIDITLLKCLEERDDGVRWQAFVRPAKRVRAG 116
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
D + + A V + E +L ++ + + GT+PLPPYIARKR +
Sbjct: 117 DDIEI------GPVTARV-KRREGAEAVLHIPLTPSAFQSFLYDHGTMPLPPYIARKRAV 169
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+ D YQT + K GSVAAPTAGLHFT LLS + G + VTLHVGAGTF+P+
Sbjct: 170 EVSDQDRYQTVFGKRPGSVAAPTAGLHFTDRLLSAIAERGATILRVTLHVGAGTFLPITA 229
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
D DH MHSE G + P A+ L + K+ G RI VGTT+LR++ETA + G + ++G
Sbjct: 230 ADCTDHRMHSEWGEVSPPVAERLRAAKAGGERITCVGTTALRIVETAA-QSGEVQAFAGE 288
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFITPG+ F+ D L++NFHLP+STLLMLVSAF G E Y+ AI+ YRF+SYGD
Sbjct: 289 TDIFITPGFSFQCADRLLTNFHLPRSTLLMLVSAFSGRERILSAYREAINEGYRFFSYGD 348
Query: 353 TSLLFQ 358
LL +
Sbjct: 349 ACLLER 354
>gi|330991057|ref|ZP_08315011.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Gluconacetobacter sp. SXCC-1]
gi|329761878|gb|EGG78368.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Gluconacetobacter sp. SXCC-1]
Length = 397
Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats.
Identities = 168/359 (46%), Positives = 221/359 (61%), Gaps = 14/359 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+V +FDF LPP RIA P PRDSARL+ V I D V DLP L + D +V
Sbjct: 49 LVSDFDFTLPPDRIADHPARPRDSARLLDV----PVAGPIMDRHVRDLPGCLRAGDILVA 104
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T VI AQL+ R I TL + SW V AR ++ + GD L F
Sbjct: 105 NDTAVIPAQLSATRGA------ARIGITLDRILPDGSWHVLARNARRLHPGDTLAF---- 154
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G S + A V+ + G++ L FS+ G ++ + G + LPPYIAR +D DY
Sbjct: 155 GASPVTADVLACGDAGDVTLRFSVEGAAFDQFLHDTGHLALPPYIARPEGPTEQDRKDYA 214
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A+ +G+VAAPTAGLHFT +LL+ L G+ +TLHVGAGTF+P++ E H MH
Sbjct: 215 TIFAQHRGAVAAPTAGLHFTPDLLAALDHAGVLRQTLTLHVGAGTFLPMRSEQISAHRMH 274
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
+E G I A+ +N+ ++ GGRI++VGTTSLRLLE+AT EDG+++P+ G T IFI PGY
Sbjct: 275 AERGTITPHAARRINAARAAGGRIIAVGTTSLRLLESATDEDGVVHPFHGETAIFIKPGY 334
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
RFRAVD+L++NFHLP+STL MLV AF G + Y HAI+ YRFYSYGD LL +
Sbjct: 335 RFRAVDMLLTNFHLPRSTLFMLVCAFGGYRRMQAAYAHAIAKGYRFYSYGDACLLHRSE 393
>gi|53720476|ref|YP_109462.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei K96243]
gi|254299192|ref|ZP_04966642.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 406e]
gi|81607721|sp|Q63R06|QUEA_BURPS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|52210890|emb|CAH36878.1| putative queuosine S-adenosylmethionine:tRNA
ribosyltransferase-isomerase [Burkholderia pseudomallei
K96243]
gi|157808970|gb|EDO86140.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 406e]
Length = 360
Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats.
Identities = 144/364 (39%), Positives = 198/364 (54%), Gaps = 21/364 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVH-PNLSCPLVISDHLVSDLPAFLNSNDAI 59
+ + +FDFDLPP IA + R ++RL+ V N S P + D ++LPA + D +
Sbjct: 2 LTLSDFDFDLPPELIAQTALPERSASRLLEVDNTNPSAPPRLVDRRFAELPACVAPGDLL 61
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFN+TKV+ A+ G + +I + + R SK G L
Sbjct: 62 VFNDTKVLKARFFGRKAS-----GGKIEVLIERVTGERTALAQIRASKSPPPGTTLTLAD 116
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ TV ++ L + I G +PLPPYI DA D
Sbjct: 117 A-----FDVTVGERVEPFFTLHFPD----DCLVLIERHGRLPLPPYIEH--APDAADETR 165
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H
Sbjct: 166 YQTVFAANPGAVAAPTAGLHFDDAVLTALEARGVERATLTLHVGAGTFQPVRVENLAEHR 225
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE----TATTEDGIINPWSGFTNI 295
MHSE + + + + ++RGGR+++VGTTS+R LE A + T+I
Sbjct: 226 MHSESYELTDALVEKIAATRARGGRVIAVGTTSMRALEAAARDAQAAGRPLAATRAETDI 285
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFR VD L++NFHLPKSTLLMLVSAF GIE + Y+HAI YRF+SYGD L
Sbjct: 286 FITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGIETIRAAYRHAIDARYRFFSYGDAML 345
Query: 356 LFQK 359
L ++
Sbjct: 346 LTRR 349
>gi|121600954|ref|YP_991656.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia mallei SAVP1]
gi|124383619|ref|YP_001027151.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia mallei NCTC 10229]
gi|126449230|ref|YP_001082100.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia mallei NCTC 10247]
gi|167000544|ref|ZP_02266356.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia mallei PRL-20]
gi|254178811|ref|ZP_04885465.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia mallei ATCC 10399]
gi|166216706|sp|A3MPB4|QUEA_BURM7 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|166216707|sp|A2S5D2|QUEA_BURM9 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|166216708|sp|A1V0A3|QUEA_BURMS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|121229764|gb|ABM52282.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia mallei SAVP1]
gi|124291639|gb|ABN00908.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia mallei NCTC 10229]
gi|126242100|gb|ABO05193.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia mallei NCTC 10247]
gi|160694725|gb|EDP84733.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia mallei ATCC 10399]
gi|243063598|gb|EES45784.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia mallei PRL-20]
Length = 360
Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats.
Identities = 144/364 (39%), Positives = 197/364 (54%), Gaps = 21/364 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVH-PNLSCPLVISDHLVSDLPAFLNSNDAI 59
+ + +FDFDLPP IA + R ++RL+ V N S P + D ++LPA + D +
Sbjct: 2 LTLSDFDFDLPPELIAQTALPERSASRLLEVDNTNPSAPPRLIDRRFAELPACVAPGDLL 61
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFN+TKV+ A+ G + +I + + R SK G L
Sbjct: 62 VFNDTKVLKARFFGRKAS-----GGKIEVLIERVTGERTALAQIRASKSPPPGTTLTLAD 116
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ TV ++ L I G +PLPPYI DA D
Sbjct: 117 A-----FDVTVGERVEPFFTLHFPDNC----LVLIERHGRLPLPPYIEH--APDAADETR 165
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H
Sbjct: 166 YQTVFAANPGAVAAPTAGLHFDDAVLAALEARGVERATLTLHVGAGTFQPVRVENLAEHR 225
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE----TATTEDGIINPWSGFTNI 295
MHSE + + + + ++RGGR+++VGTTS+R LE A + T+I
Sbjct: 226 MHSESYELTDALVEKIAATRARGGRVIAVGTTSMRALEAAARDAQAAGRPLAATRAETDI 285
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFR VD L++NFHLPKSTLLMLVSAF GIE + Y+HAI YRF+SYGD L
Sbjct: 286 FITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGIETIRAAYRHAIDARYRFFSYGDAML 345
Query: 356 LFQK 359
L ++
Sbjct: 346 LTRR 349
>gi|313679722|ref|YP_004057461.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Oceanithermus profundus DSM 14977]
gi|313152437|gb|ADR36288.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Oceanithermus profundus DSM 14977]
Length = 339
Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats.
Identities = 141/355 (39%), Positives = 192/355 (54%), Gaps = 23/355 (6%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++++D+ LP RIA PRD +RLMVV +LP FL + D +VF
Sbjct: 7 RIEDYDYPLPEERIAQEGASPRDHSRLMVVERGRGVRA---HARFFELPRFLRAGDLLVF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N TKVI A++ GV+ + L +P W RP + ++ G + F
Sbjct: 64 NETKVIPARIFGVKE-----GGARVEALLVREEAPERWWAMVRPGRRLRPGARVRF---- 114
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
L A V + G LLVFS + + +G PLPPYI R D YQ
Sbjct: 115 --GELAAEVAAVDDEGLRLLVFSGP---VRPLLERLGRTPLPPYIHR-----PVDPERYQ 164
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YA+ +GSVAAPTAGLHFT LL L ++G++ V LHVG GTF PVK ++H MH
Sbjct: 165 TVYARREGSVAAPTAGLHFTPRLLEELAAMGVEQARVVLHVGPGTFQPVKGA-IEEHRMH 223
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
+E + A A +N + G R+V+VGTT +R LE A + P +G T +FI P Y
Sbjct: 224 AERYEVPAEAAARVNRALAEGRRVVAVGTTVVRTLEAAFAPGEGVRPGAGETRLFIRPPY 283
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
RF+ V L++NFHLP+STLLMLV+AF G E T Y+ A++ YRF+S GD ++
Sbjct: 284 RFQVVGGLVTNFHLPRSTLLMLVAAFAGYEVTMAAYREALARDYRFFSLGDAMVI 338
>gi|161525832|ref|YP_001580844.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia multivorans ATCC 17616]
gi|160343261|gb|ABX16347.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Burkholderia multivorans ATCC 17616]
Length = 368
Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats.
Identities = 142/362 (39%), Positives = 196/362 (54%), Gaps = 21/362 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDF+LPP IA + R ++RL+ V + P D ++LPA + D +VF
Sbjct: 16 TLSDFDFNLPPELIAQTALPDRTASRLLEVD-ATAEPARFVDRRFAELPACIARGDLLVF 74
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKV+ A+ G + I + ++ R SK G L
Sbjct: 75 NDTKVLKARFFGQKAS-----GGRIEVLIERVTGSHTALAQIRASKSPGAGTTLRLADA- 128
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ TV ++ L F +EL I G +PLPPYI DA D YQ
Sbjct: 129 ----FDVTVGERVEPF-FTLHFPQPCLEL---IEQYGRLPLPPYIEHD--PDATDETRYQ 178
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YA G+VAAPTAGLHF LL++L ++GI+ +TLHVGAGTF PV+VE+ +H MH
Sbjct: 179 TVYASNPGAVAAPTAGLHFDEPLLAKLDAMGIERATLTLHVGAGTFQPVRVENIAEHKMH 238
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSL----RLLETATTEDGIINPWSGFTNIFI 297
SE + + + ++RGG++++VGTTS+ A + T+IFI
Sbjct: 239 SEWYELPQSLVDKIAATRARGGKVIAVGTTSMRALEAAARDAEAAGRPLAATQAETDIFI 298
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFR VD L++NFHLPKSTL+MLVSAF GIE + Y+HAI YRF+SYGD LL
Sbjct: 299 TPGYRFRVVDRLVTNFHLPKSTLMMLVSAFAGIETIRAAYRHAIEQRYRFFSYGDAMLLT 358
Query: 358 QK 359
++
Sbjct: 359 RR 360
>gi|78355089|ref|YP_386538.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Desulfovibrio desulfuricans subsp. desulfuricans str.
G20]
gi|91207423|sp|Q317N3|QUEA_DESDG RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|78217494|gb|ABB36843.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Desulfovibrio desulfuricans subsp. desulfuricans str.
G20]
Length = 380
Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats.
Identities = 137/369 (37%), Positives = 194/369 (52%), Gaps = 31/369 (8%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ + F+LP +IA P R ++RL V+ S D+ +FL +V N
Sbjct: 29 LAGYRFELPEEQIAQHPPEHRGASRLFVMDRKSGVNTQAS---FKDIGSFLPEGALLVAN 85
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRV------------SPNSWSVYARPSKVIK 110
N++V+ A++ G R ++ L + S R SK ++
Sbjct: 86 NSRVLPARMLGRRP-----TGGKVEFLLLTPLPLVQPQTGTDGRSCAEAEGLLRASKRVR 140
Query: 111 KGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKR 170
GD++HF L+ V+ + G + G +L G +PLPPYI +R
Sbjct: 141 PGDVMHF------DGLDVEVLHTADFGRCAVRMHWKG-DLAGLFLRQGHLPLPPYI--RR 191
Query: 171 PIDARDYVDYQTTYAK--IQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFM 228
P D+ YQT Y++ GSVAAPTAGLHFT L + L G VTL+VG GTF
Sbjct: 192 PDGEDDHSRYQTVYSRQDRLGSVAAPTAGLHFTPELTASLQEQGFGWAEVTLYVGYGTFS 251
Query: 229 PVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINP 288
PV+ ED H MH E I AQA+N K +G +V+VGTTS R+LE A G I P
Sbjct: 252 PVRAEDIRTHTMHREYMEITEQAAQAINDAKRQGRPVVTVGTTSTRVLEGAWAACGEIRP 311
Query: 289 WSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
++G+T+IFI PGYRF D +++NFHLP+S+LLM++SAF G E+T + Y A++ YRF+
Sbjct: 312 FTGWTDIFIYPGYRFNVADHIITNFHLPESSLLMMISAFAGREKTLQAYSQAVAAGYRFF 371
Query: 349 SYGDTSLLF 357
SYGD L+
Sbjct: 372 SYGDAMLIL 380
>gi|42527952|ref|NP_973050.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Treponema
denticola ATCC 35405]
gi|81570134|sp|Q73JQ7|QUEA_TREDE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|41818997|gb|AAS12969.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Treponema
denticola ATCC 35405]
Length = 347
Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats.
Identities = 136/361 (37%), Positives = 195/361 (54%), Gaps = 18/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+ KEF+FDLP IA P R RL+++ + D L ++LP L N +V
Sbjct: 1 MLTKEFNFDLPEELIAQSPSEKRGGDRLLILDKQSGK---LEDRLFTELPEILPKNALMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTL---HMRVSPNSWSVYARPSKVIKKGDILHF 117
FNN+KV A++ ++ + + W V A+ +K K G F
Sbjct: 58 FNNSKVRHARIYAK-----SKTNAVCEFLMINPMRDSDGSLWQVMAKKAKRQKPGKTFLF 112
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+E+ + + + I + + G +PLPPYI RK + D
Sbjct: 113 EDGTEAEIIESEIPLESEFRCMKFNRVID----DEWLDKYGHMPLPPYIHRKDTQEDAD- 167
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YA+I GS+AAPTAGLHFT +LS++ GI + +VTLHVG GTF+PV+ E +D
Sbjct: 168 -RYQTVYAEIYGSIAAPTAGLHFTQEVLSKIRDKGIDIEYVTLHVGLGTFLPVRAEKIED 226
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIF 296
H MH+E FI TAQA+ K G I++VGTT++R LE+A E + + T+IF
Sbjct: 227 HKMHTEHFFISEKTAQAVEKAKKEGRPIIAVGTTTVRTLESAWDEKRKELKWGNQSTDIF 286
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y+F+ +D L +NFH P+S+L+MLVSA G E K Y+HA+ Y+F+SYGD L+
Sbjct: 287 IYPSYKFKLIDKLFTNFHTPESSLVMLVSALAGKENIFKAYRHAVEEKYKFFSYGDAMLI 346
Query: 357 F 357
Sbjct: 347 L 347
>gi|288929542|ref|ZP_06423386.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
sp. oral taxon 317 str. F0108]
gi|288329047|gb|EFC67634.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
sp. oral taxon 317 str. F0108]
Length = 388
Score = 398 bits (1022), Expect = e-109, Method: Composition-based stats.
Identities = 124/394 (31%), Positives = 187/394 (47%), Gaps = 43/394 (10%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVHPNLSCPLVIS 42
M + +F+F LP IAL P + RD RLMV+H +
Sbjct: 1 MKLSQFNFKLPQELIALYPNSVYHEIKNEKGEKEMSRLTRRDECRLMVLHKKSGTIDLFR 60
Query: 43 DH-----------LVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLH 91
D+ + + D +FN+TKV A+L G++ + + +I L
Sbjct: 61 KDKKGKPIKGDFLQFRDVIDYFDEGDTFIFNDTKVFPARLYGMK----EKTDAKIEVFLL 116
Query: 92 MRVSP--NSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLV--FSISG 147
++ W V P++ I+ G+ L F D + A VID + L +
Sbjct: 117 RELNQEMRLWDVLVEPARKIRIGNKLFF---DDSGTMVAEVIDNTTSRGRTLRFLYDCDH 173
Query: 148 IELERQISLVGTIPLPPYIARKRPI---DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNL 204
E +R + +G PLP YI KR D D+QT YA +G+V AP GLHF+ L
Sbjct: 174 DEFKRSLFALGESPLPRYIIDKRENHHGTEEDMEDFQTIYAANEGAVTAPATGLHFSREL 233
Query: 205 LSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGR 264
L R+ GI F+TLH G G F ++VED H + SE I A +N K+ G R
Sbjct: 234 LKRMEIRGINSAFITLHCGLGNFHDIEVEDLTKHKVDSESMHIGAEACAIVNKTKAEGRR 293
Query: 265 IVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLV 324
+ ++GT+ ++ ETA DG++ ++G+TN FI P Y F D +M+NF+ P STLLM
Sbjct: 294 VCAIGTSVVKATETAVGTDGMLKEYTGWTNRFIFPPYDFGLADTMMANFYHPLSTLLMST 353
Query: 325 SAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+AF G + + Y+ A+ + Y+F +GD L+
Sbjct: 354 AAFGGYDLVMEAYRLAVENEYKFGCFGDALLILN 387
>gi|53726169|ref|YP_103943.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia mallei ATCC 23344]
gi|67642347|ref|ZP_00441105.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia mallei GB8 horse 4]
gi|254202658|ref|ZP_04909021.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia mallei FMH]
gi|254207999|ref|ZP_04914349.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia mallei JHU]
gi|81604315|sp|Q62H77|QUEA_BURMA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|52429592|gb|AAU50185.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia mallei ATCC 23344]
gi|147746905|gb|EDK53982.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia mallei FMH]
gi|147751893|gb|EDK58960.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia mallei JHU]
gi|238523486|gb|EEP86924.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia mallei GB8 horse 4]
Length = 360
Score = 398 bits (1022), Expect = e-108, Method: Composition-based stats.
Identities = 144/364 (39%), Positives = 196/364 (53%), Gaps = 21/364 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVH-PNLSCPLVISDHLVSDLPAFLNSNDAI 59
+ + +FDFDLPP IA + R ++RL+ V N S P + D ++LPA + D +
Sbjct: 2 LTLSDFDFDLPPELIAQTALPERSASRLLEVDNTNPSAPPRLIDRRFAELPACVAPGDLL 61
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFN+TKV+ A+ G + +I + R SK G L
Sbjct: 62 VFNDTKVLKARFFGRKAS-----GGKIEVLIERVTGERIALAQIRASKSPPPGTTLTLAD 116
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ TV ++ L I G +PLPPYI DA D
Sbjct: 117 A-----FDVTVGERVEPFFTLHFPDNC----LVLIERHGRLPLPPYIEH--APDAADETR 165
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H
Sbjct: 166 YQTVFAANPGAVAAPTAGLHFDDAVLAALEARGVERATLTLHVGAGTFQPVRVENLAEHR 225
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE----TATTEDGIINPWSGFTNI 295
MHSE + + + + ++RGGR+++VGTTS+R LE A + T+I
Sbjct: 226 MHSESYELTDALVEKIAATRARGGRVIAVGTTSMRALEAAARDAQAAGRPLAATRAETDI 285
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFR VD L++NFHLPKSTLLMLVSAF GIE + Y+HAI YRF+SYGD L
Sbjct: 286 FITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGIETIRAAYRHAIDARYRFFSYGDAML 345
Query: 356 LFQK 359
L ++
Sbjct: 346 LTRR 349
>gi|121609294|ref|YP_997101.1| queuosine biosynthesis protein [Verminephrobacter eiseniae EF01-2]
gi|121553934|gb|ABM58083.1| Queuosine biosynthesis protein [Verminephrobacter eiseniae EF01-2]
Length = 384
Score = 398 bits (1022), Expect = e-108, Method: Composition-based stats.
Identities = 135/373 (36%), Positives = 202/373 (54%), Gaps = 29/373 (7%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDF LPP IA P R +ARL+ + P+ D + +LP L + D +V
Sbjct: 14 TLSDFDFTLPPELIAQHPAPERSAARLL--DGRTAPPV---DRIFRELPGLLRAGDLLVS 68
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRV------SPNSWSVYARPSKVIKKGDIL 115
N+T+V+ A+L G + ++ + + + N + + + K + G +
Sbjct: 69 NDTRVLNARLFGAKAS-----GGKLELLIERVLPAAAGSAGNEVAAHMKVGKKPQPGSTV 123
Query: 116 HFFSQDGQSRLEATVIDKWNTGE----ILLVFSISGIELERQISLVGTIPLPPYIAR--- 168
+AT++ +W T + + + + G +PLPPYI R
Sbjct: 124 QIAGGRQAGGFDATLLGRWPTADGPLYRFALHGPANESPWELMQRHGHLPLPPYIVRRQN 183
Query: 169 --KRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGT 226
P A D YQT +A+ G+VAAPTA LHF ++LS L + GI+ +TLHVGAGT
Sbjct: 184 TGHDPHGAEDSQRYQTLFARHPGAVAAPTAALHFDQSVLSALAARGIEHASITLHVGAGT 243
Query: 227 FMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII 286
F+PVK E+ + H MHSE + T AL + RG R+V+VGTT++R LE+
Sbjct: 244 FLPVKTENLEQHRMHSEWYRLPPSTLTALERCRQRGARVVAVGTTTVRTLESWARSGLA- 302
Query: 287 NPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYR 346
+G T+IFITPG+ F+ VD+L++NFHLPKSTL+MLVSAF G +Y+HA++ YR
Sbjct: 303 ---TGETSIFITPGFPFQVVDLLITNFHLPKSTLMMLVSAFAGHAHVMALYRHAMAQRYR 359
Query: 347 FYSYGDTSLLFQK 359
F+SYGD LL ++
Sbjct: 360 FFSYGDAMLLARQ 372
>gi|108761956|ref|YP_632860.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Myxococcus
xanthus DK 1622]
gi|108465836|gb|ABF91021.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Myxococcus
xanthus DK 1622]
Length = 371
Score = 398 bits (1022), Expect = e-108, Method: Composition-based stats.
Identities = 142/371 (38%), Positives = 201/371 (54%), Gaps = 30/371 (8%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ ++DF LP S+IA P+ RD++RLM + + S +DL L D +V
Sbjct: 13 RLSDYDFALPESQIAQAPLAERDASRLMTISRSSGTW---SHRRFADLQELLRPGDLLVL 69
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--------------WSVYARPSK 107
N+ +VI A+L G + + + + N+ W + SK
Sbjct: 70 NDARVIPARLLGQKA----GTGGRVELLVVRPAAQNTLTSAALGAAPESLDWVCLGQASK 125
Query: 108 VIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFS-ISGIELERQISLVGTIPLPPYI 166
+K G + F S LEA + + GE + F G L + G +PLPPYI
Sbjct: 126 GLKPGQRVMFASG-----LEAEIQEALGGGEYRVRFHAPPGASLAALLDAAGRLPLPPYI 180
Query: 167 ARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGT 226
R+ DA D YQT YA+ G+VAAPTAGLHFT L+ L + G+ VTL VG GT
Sbjct: 181 TRE--PDAADAERYQTVYARASGAVAAPTAGLHFTQETLAALAARGVHRALVTLDVGPGT 238
Query: 227 FMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-EDGI 285
F+PV+ +D D H MH E + TA+A+N+ ++ G R+V+VGTT +R LE+AT E G
Sbjct: 239 FLPVREDDLDKHHMHPERYTVPEATAKAINAARAEGRRVVAVGTTVVRTLESATDPETGR 298
Query: 286 INPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAY 345
+ G T +FI PG+ FR VD+L++NFHLP+STL++LVSA G E T + Y A+ Y
Sbjct: 299 LRAGPGETTLFIRPGFAFRQVDLLLTNFHLPRSTLVVLVSALLGRERTLEAYAEAVRAGY 358
Query: 346 RFYSYGDTSLL 356
RF+SYGD L+
Sbjct: 359 RFFSYGDAMLV 369
>gi|317486110|ref|ZP_07944957.1| tRNA ribosyltransferase-isomerase [Bilophila wadsworthia 3_1_6]
gi|316922633|gb|EFV43872.1| tRNA ribosyltransferase-isomerase [Bilophila wadsworthia 3_1_6]
Length = 365
Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats.
Identities = 132/365 (36%), Positives = 188/365 (51%), Gaps = 22/365 (6%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ + ++LPP RIA P R ++RL+V+ + S L +L ++
Sbjct: 12 LLSSYRYELPPERIAQHPGE-RGASRLLVLDRETGKRI---HSHFSHLLEYLPKGTLLIA 67
Query: 62 NNTKVITAQLNGVRFCHINRREKEISC--TLHMRVSPNSWSV-----YARPSKVIKKGDI 114
NN++V+ A++ G R ++ L + W +P+K + GD
Sbjct: 68 NNSRVVPARMIGQRPSGGKMEFLLLTPMPLLEQHGEGDGWHCAEADGLIKPAKNARIGDY 127
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
L F L V+ K G + +G ++ G +PLPPYI R+ D
Sbjct: 128 LVFGDD-----LRVEVLAKGEFGRHRVRLHWTG-DIRALFESRGHLPLPPYIKREDTKD- 180
Query: 175 RDYVDYQTTYAK--IQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D YQT YA+ GSVAAPTAGLHFT L +++ S G++ VTLHVG GTF PV+
Sbjct: 181 -DRGTYQTVYARDDKAGSVAAPTAGLHFTPELRAQMASAGVEWAEVTLHVGYGTFSPVRC 239
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSG 291
ED +H+MH E + T A+ K+ G +++VGTTS R LE A G + G
Sbjct: 240 EDIREHVMHEEFVEVPQATVDAIGKAKAEGRPVIAVGTTSARTLEGVAGAHGGELTAHQG 299
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
+ N FI PGYRF +D L++NFHLP+STLLMLVSA G E + Y A+ YRF+SYG
Sbjct: 300 WINCFIWPGYRFHVLDGLITNFHLPESTLLMLVSALTGRERMLETYTEAVKMEYRFFSYG 359
Query: 352 DTSLL 356
D L+
Sbjct: 360 DAMLI 364
>gi|307702043|ref|ZP_07639050.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus mitis NCTC 12261]
gi|307616530|gb|EFN95720.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus mitis NCTC 12261]
Length = 294
Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats.
Identities = 135/306 (44%), Positives = 181/306 (59%), Gaps = 14/306 (4%)
Query: 53 LNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKG 112
L DA+V N+T+V+ A+L G + + L + + W V A+P+K +K G
Sbjct: 2 LEPGDALVMNDTRVLPARLYGQK----EETGGHVELLLLKNTAGDEWEVLAKPAKRLKVG 57
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
+ F G RL A V ++ G ++ F GI LE + +G +PLPPYI K
Sbjct: 58 TRVSF----GDGRLSAVVTEELTHGGRIVRFEYQGIFLE-VLESLGEMPLPPYIHEKLD- 111
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D YQT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V
Sbjct: 112 ---DRERYQTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSV 168
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSG 291
++ D+H MHSE + A L SVK GR+++VGTTS+R LET ++ DG I SG
Sbjct: 169 DNLDEHEMHSEFYQLSEEAAATLRSVKENSGRVIAVGTTSIRTLETIGSKFDGQIQADSG 228
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
+TNIFI PGY ++ VD +NFHLPKSTL+MLVSAF G E Y HAI YRF+S+G
Sbjct: 229 WTNIFIKPGYEWKVVDAFSTNFHLPKSTLVMLVSAFAGRELVLDAYHHAIQEHYRFFSFG 288
Query: 352 DTSLLF 357
D ++
Sbjct: 289 DAMFIY 294
>gi|313673199|ref|YP_004051310.1| s-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Calditerrivibrio nitroreducens DSM 19672]
gi|312939955|gb|ADR19147.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Calditerrivibrio nitroreducens DSM 19672]
Length = 339
Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats.
Identities = 129/357 (36%), Positives = 197/357 (55%), Gaps = 22/357 (6%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++K++DF+LP IA P R+ + LMVV + + + ++ +L +V
Sbjct: 4 LLKDYDFELPEELIAQYPAEKREESNLMVVDRSKNDFFI---TKFKNIVDYLPEKSFLVV 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNTKV+ +++ + + ++ + + R +K GDIL
Sbjct: 61 NNTKVLKSRIYAQKIS-----GGRVEVFFIEKIDDHIFKAMTR--GRLKDGDILKI---- 109
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ ++ ++ +SGI++ + G IPLPPYI KR D+ D YQ
Sbjct: 110 -NDSITLKILGSCEDNLRIV--ELSGIDIYNLLDKFGHIPLPPYI--KREDDSHDETRYQ 164
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YA+ GSVAAPTAGLHFT L+ R+ ++ +TL+VG GTF PVK E+ +H MH
Sbjct: 165 TVYAQKPGSVAAPTAGLHFTEELIERIRQKH-EILEITLNVGIGTFRPVKTENIQEHQMH 223
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPW-SGFTNIFITPG 300
SE FI + + +N +KS G +++SVGTT+ R LE A +DG++ + T+IFI G
Sbjct: 224 SEKFFIPEESFKRINLLKSNGHKLISVGTTTTRCLE-AVAKDGLLQSYGESETDIFIKSG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ +D L++NFHLPKSTL +LVS F G++ KK Y +AI RF+SYGD L+
Sbjct: 283 YKFQIIDHLVTNFHLPKSTLFILVSTFAGLDLMKKAYAYAIEKRMRFFSYGDAMLII 339
>gi|171910851|ref|ZP_02926321.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Verrucomicrobium spinosum DSM 4136]
Length = 324
Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats.
Identities = 135/357 (37%), Positives = 191/357 (53%), Gaps = 33/357 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M+ +FD+ LP IA P+ R ++R++VVH I +DLP +L +D +V
Sbjct: 1 MLTSDFDYQLPEELIASEPLADRSASRMLVVHRESGT---IEHRSFTDLPKYLRPDDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+ +P W +P K ++ G + S
Sbjct: 58 LNDTRVLPARYFSNDGTK--------ELLRLTFATPTLWRCMVKPGKKLRVGHTIAIGSA 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G TV + + G+ L+ F E + G + LPPY+ R+ + D Y
Sbjct: 110 TG------TVKEIYENGDRLIEFDQMVDE-----AAFGHLALPPYMEREERTE--DKERY 156
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +AK +GS+AAPTAGLHFT LL+ + FVTLHVG GTF PVK + DH+M
Sbjct: 157 QTVFAKHEGSIAAPTAGLHFTPELLASV-----PHTFVTLHVGVGTFQPVKADRITDHVM 211
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE F+ +AQ +N GR+++VGTT+ R+LE+ + G + G T+IFI P
Sbjct: 212 HSERYFLSEASAQRINEA----GRVIAVGTTATRVLESIAQKHGGLKAAEGETSIFIYPP 267
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y FR VD L++NFHLPKSTL+MLVSA G + + Y+ AI YRFYSYGD L+
Sbjct: 268 YEFRVVDALVTNFHLPKSTLMMLVSALAGKDLIFRAYEEAIRERYRFYSYGDCMLIL 324
>gi|114797801|ref|YP_761436.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Hyphomonas
neptunium ATCC 15444]
gi|123322972|sp|Q0BYK7|QUEA_HYPNA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|114737975|gb|ABI76100.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Hyphomonas
neptunium ATCC 15444]
Length = 351
Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats.
Identities = 158/360 (43%), Positives = 206/360 (57%), Gaps = 11/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F FDLP IALRP P+D+ARL+VVH + + D V DLP +LN+ D +V
Sbjct: 1 MDLSVFQFDLPEDLIALRPAQPQDAARLLVVHGD----GRLIDATVRDLPKYLNTGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCH-INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
FN+T+V+ A L GVR R+ E+ L R W ARP + +K GD + F
Sbjct: 57 FNDTRVLPAALKGVRPARDGASRDVEVDVNLVERQGDCLWLALARPGRRLKDGDEIFFAE 116
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
A + + GEILL F+ G + + G +PLPPYIAR+RP DA D
Sbjct: 117 G-----FSARIASRREGGEILLDFNCEGEAMIAALDAHGAMPLPPYIARRRPADAEDRET 171
Query: 180 YQTTYAKIQG-SVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT +A SVAAPTAGLHFT LL+ + + G+K V LHVG GTF P++ ++
Sbjct: 172 YQTRFAGEDAASVAAPTAGLHFTPRLLAEVEAAGLKRETVRLHVGLGTFKPLEDRHLSEN 231
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
+H E I A LN+ ++ G R+V VGTT++R LE+ EDG I+ +G T+IF+
Sbjct: 232 RLHEEWRRITPEVADRLNAARAAGARLVPVGTTAMRTLESCAGEDGQIHAATGPTDIFLK 291
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG RA D LM+NFHLP S+L MLVSA G + Y HAI YRFYSYGD LL
Sbjct: 292 PGDPVRATDALMTNFHLPGSSLFMLVSALMGTSLMRAAYAHAIEEKYRFYSYGDACLLLP 351
>gi|134280132|ref|ZP_01766843.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 305]
gi|134248139|gb|EBA48222.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 305]
Length = 360
Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats.
Identities = 143/364 (39%), Positives = 198/364 (54%), Gaps = 21/364 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVH-PNLSCPLVISDHLVSDLPAFLNSNDAI 59
+ + +FDFDLPP IA + R ++RL+ V N S P + D ++LPA + D +
Sbjct: 2 LTLSDFDFDLPPELIAQTALPERSASRLLEVDNTNPSAPPRLVDRRFAELPACVAPGDLL 61
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFN+TKV+ A+ G + +I + + R SK G L
Sbjct: 62 VFNDTKVLKARFFGRKAS-----GGKIEVLIERVTGERTALAQIRASKSPPPGTTLTLAD 116
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ TV ++ L + I G +PLPPYI DA D
Sbjct: 117 A-----FDVTVGERVEPFFTLHFPD----DCLVLIKRHGRLPLPPYIEH--APDAADETR 165
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H
Sbjct: 166 YQTVFAANPGAVAAPTAGLHFDDAVLAALEARGVERATLTLHVGAGTFQPVRVENLAEHR 225
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE----TATTEDGIINPWSGFTNI 295
MHSE + + + + ++RGGR++++GTTS+R LE A + T+I
Sbjct: 226 MHSESYELTDALVEKIAATRARGGRVIAIGTTSMRALEAAARDAQAAGRPLAATRAETDI 285
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FITPGYRFR VD L++NFHLPKSTLLMLVSAF GIE + Y+HAI YRF+SYGD L
Sbjct: 286 FITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGIETIRAAYRHAIDARYRFFSYGDAML 345
Query: 356 LFQK 359
L ++
Sbjct: 346 LTRR 349
>gi|296283991|ref|ZP_06861989.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Citromicrobium bathyomarinum JL354]
Length = 349
Score = 396 bits (1019), Expect = e-108, Method: Composition-based stats.
Identities = 177/360 (49%), Positives = 228/360 (63%), Gaps = 11/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLPP RIALRPV PRD+A+++VV +D V DLP L + D +V
Sbjct: 1 MKVDLFDFDLPPERIALRPVSPRDAAKMLVVDG----AAPFADRQVRDLPDLLRAGDVLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI AQL G R I TLH R+ W + R +K +++GD + F
Sbjct: 57 FNDTRVIPAQLEGERIRE-GASGAAIGATLHKRIDARRWQAFVRNAKRLREGDTIRFPDG 115
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ T + G L F+ G +E ++ G +PLPPYIA++R D RD DY
Sbjct: 116 -----ISVTAEARAEDGSWTLAFAG-GEPVEELLARAGAMPLPPYIAQRRAADERDAQDY 169
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A G+VAAPTA LHFT L+ RL + GI +TLHVGAGTF+PVK +DT H M
Sbjct: 170 QTLFADKAGAVAAPTAALHFTPALVERLDAAGIVRETLTLHVGAGTFLPVKADDTAQHKM 229
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E G I A A LN+ ++ G R+++VGTTSLRLLE+A ++ I P++G T+IFITPG
Sbjct: 230 HAEWGEITAEAAARLNAARAEGRRVIAVGTTSLRLLESAADQNHTIQPFAGDTDIFITPG 289
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
Y FRAVD LM+NFHLPKSTL+MLVSA G E + Y +AI+H YRFYSYGD+SLL R
Sbjct: 290 YEFRAVDGLMTNFHLPKSTLMMLVSALMGRERMMEAYAYAIAHEYRFYSYGDSSLLLPPR 349
>gi|257063451|ref|YP_003143123.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Slackia
heliotrinireducens DSM 20476]
gi|256791104|gb|ACV21774.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Slackia
heliotrinireducens DSM 20476]
Length = 361
Score = 396 bits (1019), Expect = e-108, Method: Composition-based stats.
Identities = 131/371 (35%), Positives = 183/371 (49%), Gaps = 26/371 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD++LPP RIA P RD RL+V+ ++D + D+ +L D +V
Sbjct: 1 MRTDDFDYELPPERIAQEPWPVRDECRLLVMDRKTG---EVTDRIFRDVAEYLQPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--------NSWSVYARPSKVIKKG 112
N T+V+ A+L G + L W V RP + +K G
Sbjct: 58 ANETRVLPARLLGSK----RGTGGACEVFLLRERFDVEPKTTHTAVWDVLVRPGRRLKPG 113
Query: 113 D--ILHFFSQDGQSRLEATVIDKWNT---GEILLVFSISGIELERQISLVGTIPLPPYIA 167
++ F DG L A +ID + GE + S + + G PLPPYI
Sbjct: 114 TGAMVDFEGPDGNVVLSAEIIDWGSDTGKGERIARLSTPLDSFDEALHAAGHTPLPPYIK 173
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
A D YQT Y++ + S AAPTAGLHFT L+ L + G++ + V L VG TF
Sbjct: 174 GY----AGDEEMYQTVYSQAETSAAAPTAGLHFTPELIGSLKAKGVEWHTVELQVGLDTF 229
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGII 286
V +D H MH+E + A ++ +RG R+ +VGTTS+R LE+A E G +
Sbjct: 230 RVVDEDDPAQHAMHTEFYSVPQSVVDACDAAHARGNRVFAVGTTSVRSLESAFDRESGKL 289
Query: 287 NPWSGF-TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAY 345
T +FI PGY F VD L++NFH+P+STL+MLVSAF E Y+HAI Y
Sbjct: 290 RARDHEATCLFILPGYTFGVVDGLITNFHVPRSTLMMLVSAFSTRENIMAAYKHAIDSEY 349
Query: 346 RFYSYGDTSLL 356
R S+GD L+
Sbjct: 350 RMLSFGDAMLI 360
>gi|85860046|ref|YP_462248.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Syntrophus
aciditrophicus SB]
gi|123517112|sp|Q2LVG6|QUEA_SYNAS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|85723137|gb|ABC78080.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Syntrophus
aciditrophicus SB]
Length = 362
Score = 396 bits (1019), Expect = e-108, Method: Composition-based stats.
Identities = 141/379 (37%), Positives = 198/379 (52%), Gaps = 40/379 (10%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++FD+ LP SRIA P RD AR+MV+ + + D P F+ D +V
Sbjct: 2 MKLQDFDYQLPQSRIAQSPCAKRDHARMMVLDRRIGS---LEHRHFYDFPDFVRKGDVLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--------------------NSWS 100
N++KVI A+L+G + I L R S +W
Sbjct: 59 INDSKVIPARLSGRKE-----TGSRIELLLLSRYSDSPAVPETDSTEWPFFRVGVEETWE 113
Query: 101 VYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTI 160
+P K I+ G + F ATVI++ N + LL F+ + + + + G
Sbjct: 114 ALLKPGKRIRIGTSIFFDDHS-----RATVIERINEKKWLLTFNTA-LPFDLFLQRYGKA 167
Query: 161 PLPPYIAR--KRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFV 218
PLPPYI R K D YQT YA+ GS+AAPTAG HF+ L L + I + V
Sbjct: 168 PLPPYIKREKKNAQMPEDRDRYQTIYARSPGSIAAPTAGFHFSEALFKTLRELEIVIAPV 227
Query: 219 TLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET 278
TLHVG GTF P++ ED +DH+M E I ++ +NS R+++VGTTS R+LE+
Sbjct: 228 TLHVGFGTFTPIETEDVEDHVMEVESFSISPESSDKINSA----ERVIAVGTTSTRVLES 283
Query: 279 ATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQ 338
A E G ++P SG + +FI PGYRF+ V L++NFHLPKS+L +L AF G + ++ Y
Sbjct: 284 AADEQGRVHPMSGQSRLFIYPGYRFKRVQALLTNFHLPKSSLFLLACAFAGKDRIQQAYA 343
Query: 339 HAISHAYRFYSYGDTSLLF 357
AI YRFYSYGD L+
Sbjct: 344 TAIQEEYRFYSYGDCMLII 362
>gi|120601094|ref|YP_965494.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Desulfovibrio vulgaris DP4]
gi|166216718|sp|A1V9F1|QUEA_DESVV RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|120561323|gb|ABM27067.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Desulfovibrio vulgaris DP4]
Length = 371
Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats.
Identities = 140/376 (37%), Positives = 194/376 (51%), Gaps = 37/376 (9%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D++LP RIA P R +RL+V+ + +DL L +V
Sbjct: 11 LLSGYDYELPEDRIAQHPPVERGLSRLLVLDRTTGERI---HARFADLAEHLPEGALLVA 67
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSV-------------------Y 102
NN+KV+ A+L G R ++ L + +
Sbjct: 68 NNSKVLPARLLGHRP-----TGGKVEFLLLTPLPLVTPLAAGPASGTVEPGWCVAEVEGL 122
Query: 103 ARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPL 162
R SK ++ GD L F L V+ K G +++ G EL + G +PL
Sbjct: 123 LRASKPLRPGDTLSFGDD-----LRVEVVHKGEFGRSMVLLFWRG-ELATLFAREGHLPL 176
Query: 163 PPYIARKRPIDARDYVDYQTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTL 220
PPYI R + RD YQT +A+ GSVAAPTAGLHFT +L L + G + VTL
Sbjct: 177 PPYIRRADGDEDRD--RYQTVFAREDRLGSVAAPTAGLHFTPSLRETLTARGHQWAEVTL 234
Query: 221 HVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT 280
+VG GTF PV+ D DH MH E + A T +A+ K+ G +V+VGTTS R+LE
Sbjct: 235 YVGYGTFSPVRCADIRDHAMHREYVEVTAETVEAIRRAKADGRPVVAVGTTSCRVLEGVA 294
Query: 281 TEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHA 340
T G + P++G+T+IF+ PGY F+ VD L++NFHLP+S+LLMLVSAF G E Y+ A
Sbjct: 295 TAKGTLEPYAGWTDIFMYPGYTFKVVDHLITNFHLPESSLLMLVSAFAGRERVLATYREA 354
Query: 341 ISHAYRFYSYGDTSLL 356
I YRF+SYGD LL
Sbjct: 355 IEEGYRFFSYGDAMLL 370
>gi|297517232|ref|ZP_06935618.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli OP50]
Length = 319
Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats.
Identities = 126/319 (39%), Positives = 185/319 (57%), Gaps = 14/319 (4%)
Query: 41 ISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWS 100
++ +DL LN D +VFNNT+VI A+L G + +I + +
Sbjct: 1 MTHGTFTDLLDKLNPGDLLVFNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRIL 55
Query: 101 VYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTI 160
+ R SK K G L + + AT+ + G + V + ++ +G +
Sbjct: 56 AHIRASKAPKPGAELLLGDDE---SINATMTARH--GALFEVEFNDERSVLDILNSIGHM 110
Query: 161 PLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTL 220
PLPPYI RP + D YQT Y++ G+VAAPTAGLHF LL +L + G+++ FVTL
Sbjct: 111 PLPPYI--DRPDEDADRELYQTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTL 168
Query: 221 HVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA- 279
HVGAGTF PV+V+ +DHIMHSE + A+ + K+RG R+++VGTTS+R LE+A
Sbjct: 169 HVGAGTFQPVRVDTIEDHIMHSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAA 228
Query: 280 -TTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQ 338
++ +I P+ T IFI PG++++ VD L++NFHLP+STL+MLVSAF G + T Y+
Sbjct: 229 QAAKNDLIEPFFDDTQIFIYPGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYK 288
Query: 339 HAISHAYRFYSYGDTSLLF 357
A+ YRF+SYGD +
Sbjct: 289 AAVEEKYRFFSYGDAMFIT 307
>gi|297616934|ref|YP_003702093.1| S-adenosylmethionine/ tRNA-ribosyltransferase-isomerase
[Syntrophothermus lipocalidus DSM 12680]
gi|297144771|gb|ADI01528.1| S-adenosylmethionine/ tRNA-ribosyltransferase-isomerase
[Syntrophothermus lipocalidus DSM 12680]
Length = 344
Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats.
Identities = 138/355 (38%), Positives = 191/355 (53%), Gaps = 16/355 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ + + LPP +A PV PRD +RL+VV D L +L +V N
Sbjct: 6 LETYQYQLPPELVAQYPVQPRDHSRLLVVERETKK---FRDRYFFALAEYLGEKHVLVLN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
T+VI +L G++ + L +V + W RP++ +K G ++ F
Sbjct: 63 ETRVIPVRLRGIKE-----TGAHVEILLLRKVGED-WQALVRPARRLKPGAVIQFT---- 112
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+A +I + ++ + + G +PLPPYI RP +D YQT
Sbjct: 113 -CGAKAEIIQELGFAGGRVIRFQGVSDWYGFLENEGEVPLPPYI--SRPPTEQDKETYQT 169
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA GS AAPTAGLHFT LL+RL G++V + LHVG GTF PV+ D H MH
Sbjct: 170 VYAARPGSAAAPTAGLHFTEQLLTRLTQQGVEVVKLLLHVGLGTFRPVESPDIRQHRMHQ 229
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E + A+ LN ++ G RIV+VGTT +R LE+A E P GFT+ +I PGYR
Sbjct: 230 EYYELGEQEAERLNDARAAGKRIVAVGTTVVRTLESAYEEKRGYVPRQGFTDCYIYPGYR 289
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
FRAVD L++NFHLPKS+LLMLV AF GI+ T Y+HA+ + YRF+SYGD +
Sbjct: 290 FRAVDQLITNFHLPKSSLLMLVCAFAGIDLTLAAYRHAVENRYRFFSYGDAMYVI 344
>gi|297181899|gb|ADI18076.1| s-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [uncultured Acidobacteriales bacterium
HF0200_23L05]
Length = 347
Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats.
Identities = 144/358 (40%), Positives = 197/358 (55%), Gaps = 12/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EF F LP IA RD+ARLM + I H VSDL L D IV
Sbjct: 1 MDLSEFGFHLPDELIAQEAEPTRDAARLMRLDRKTG---EIEHHCVSDLADLLKPGDLIV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+++VI A+L G R + C L R+ W+ P + +++G F +
Sbjct: 58 VNDSRVIPARLLGRRDPG----GGKAECLLLSRLDETRWNALVHPGQKLRQGARAVF--E 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ LE V+D G + SG ++E I +G PLPPYI KR + + D Y
Sbjct: 112 AGEHYLELEVLDCHFHGRRTIRLVSSGDDIETAIDAIGHTPLPPYI--KREVQSVDRERY 169
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ GSVAAPTAGLHFT LL+RLI+ GI +TLHVG GTF PV+ E +DH +
Sbjct: 170 QTIFARKPGSVAAPTAGLHFTPELLARLITRGISRQAITLHVGYGTFEPVRTEKVEDHRV 229
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
+E ++ TA+A+N G RI++VGTT+ R LE A G + P G T+++I
Sbjct: 230 AAEHYYVSEGTAEAVNCALDEGRRIIAVGTTTTRTLEAVARLNGGRLRPGEGQTDLYIHG 289
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ F V L++NFHLP+S+LL+L +AF G E + Y AI+ YRFYSYGD L+
Sbjct: 290 SFDFEVVGGLLTNFHLPRSSLLLLAAAFAGHERLLEAYGQAIARCYRFYSYGDAMLIL 347
>gi|283780730|ref|YP_003371485.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Pirellula
staleyi DSM 6068]
gi|283439183|gb|ADB17625.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Pirellula
staleyi DSM 6068]
Length = 349
Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats.
Identities = 139/355 (39%), Positives = 194/355 (54%), Gaps = 9/355 (2%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +DF+LP +A P+ R ARL+VV I H + DLP L D +V N
Sbjct: 4 LDAYDFELPRDLVAQHPLPHRTDARLLVVDRAKQS---IDHHHIRDLPGLLRYGDHLVMN 60
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+VI A+L G R R +W V + + G+ + S D
Sbjct: 61 DTRVIPARLVGRREQTGARWSG----LFLSADDQGNWQVLGKTRGKLLPGEAILVLSWDL 116
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ ++ ++ K G ++ G E + VG +PLPPYI I+A D +YQT
Sbjct: 117 RQSIKLRLLTKLEGGVWVVRPEPLGDPWE-LLDSVGRVPLPPYIRDGEMIEA-DSTNYQT 174
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
+AK +G+VAAPTAGLHFT LL ++ G+ VTLHVG GTF PV E +H+MHS
Sbjct: 175 VFAKTRGAVAAPTAGLHFTPELLEKVKVAGVLSSHVTLHVGLGTFRPVTAEKLAEHVMHS 234
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E + P + + KSRGGR+++VGTT R LE+A G + P+SG TN+FI P +
Sbjct: 235 EFCDVSQPAVETILKTKSRGGRVIAVGTTVARSLESAAAPTGKLEPFSGPTNLFIRPPFT 294
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F +D L++NFHLP+STLL+LV F G E ++ Y+ AI YRFYSYGD L+
Sbjct: 295 FCVLDGLLTNFHLPRSTLLVLVRTFGGDELIQQAYREAIEERYRFYSYGDAMLIL 349
>gi|319778539|ref|YP_004129452.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Taylorella
equigenitalis MCE9]
gi|317108563|gb|ADU91309.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Taylorella
equigenitalis MCE9]
Length = 350
Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats.
Identities = 141/361 (39%), Positives = 208/361 (57%), Gaps = 25/361 (6%)
Query: 4 KEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNN 63
++F ++LP RIA RP R ++L+ V D + L +D ++FN+
Sbjct: 9 EDFFYELPADRIAQRPTEKRTESKLLHV----GADGSWDDLTFPQIKNLLKKDDLLIFND 64
Query: 64 TKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQ 123
T+VI A+L G + +I C + ++P V+ R SK + G L F
Sbjct: 65 TRVIKARLFGQK-----STGGKIECLIERVIAPKCAIVHLRFSKRPQSGSQLFF-----N 114
Query: 124 SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTT 183
+ ATVID+ E L FS + + +G +PLPPYI D DY YQT
Sbjct: 115 EGITATVIDQSVD-EFTLEFS---EPVMDVLDHIGQLPLPPYIKHN--PDDFDYERYQTV 168
Query: 184 YAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSE 243
YAK +G++AAPTAGLHF +NL++ L +GI+ VTLHVG+GTF PV + DHIMHSE
Sbjct: 169 YAKSEGAIAAPTAGLHFDNNLINELTDMGIQKSMVTLHVGSGTFKPVVTSNLKDHIMHSE 228
Query: 244 IGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-----EDGIINPWSGFTNIFIT 298
+ T ++++ + GGR+++VGTTS+R +E+A T E G+ P++G T +FIT
Sbjct: 229 WFEVTEETCESISRCRRNGGRVIAVGTTSVRAIESAATLAGLSEKGVPLPYTGDTKLFIT 288
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY+ +D +++NFHLP+STLLMLV+++ G E K+Y+HA+ YRF+SYGD +
Sbjct: 289 PGYKPLVIDGMITNFHLPESTLLMLVASWMGFETMHKIYKHAVEANYRFFSYGDAMYIEP 348
Query: 359 K 359
K
Sbjct: 349 K 349
>gi|281357780|ref|ZP_06244266.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Victivallis
vadensis ATCC BAA-548]
gi|281315727|gb|EFA99754.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Victivallis
vadensis ATCC BAA-548]
Length = 354
Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats.
Identities = 130/356 (36%), Positives = 189/356 (53%), Gaps = 6/356 (1%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
FD++LP IA P RD +R+MV++ ++ S + +L DA+++N
Sbjct: 4 TALFDYELPEELIAQHPAARRDGSRMMVLNRKSGECVI---RPFSAIVDYLEPGDALIYN 60
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+V+ ++ + + E+ + W+ +P K G DG
Sbjct: 61 DTRVLRGRMYARKNSDPAGAKFELLLVEALDSERRRWNAMLKPGKRALPGVTAGLLDNDG 120
Query: 123 QSRLEAT-VIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ G+ S + +R G IPLPPYI R + D YQ
Sbjct: 121 SINSDGDSFCVIGRNGDGTFEIEFSTTDSDRLQQRYGHIPLPPYI--SRGDENADAERYQ 178
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YA+ +G+VAAPTAGLHFT +L+ L + G+ VTLHVG GTF PV VE+ ++H MH
Sbjct: 179 TVYAQKEGAVAAPTAGLHFTPEILAELKARGVGEAAVTLHVGPGTFKPVSVENAEEHQMH 238
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
SE F+ TA+ +NS + G ++++VGTT++R+LE+ T DG ++ G T IF+ P
Sbjct: 239 SEEYFLTPETAELVNSTRRTGHKVLAVGTTTVRVLESCVTPDGTVHAGHGKTRIFLYPPK 298
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
A D+L++NFHLPKSTLLMLVS FC E+ YQ AI RF+SYGD LL
Sbjct: 299 PVLAEDMLLTNFHLPKSTLLMLVSCFCDREKVLAAYQVAIRERMRFFSYGDCMLLI 354
>gi|212550785|ref|YP_002309102.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Azobacteroides pseudotrichonymphae genomovar. CFP2]
gi|226736729|sp|B6YR69|QUEA_AZOPC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|212549023|dbj|BAG83691.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Azobacteroides pseudotrichonymphae genomovar. CFP2]
Length = 354
Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats.
Identities = 125/364 (34%), Positives = 191/364 (52%), Gaps = 17/364 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F LP IAL P RD +RLMVV+ + + D+ + N D +
Sbjct: 1 MRLSKFKFHLPQELIALFPSVDRDESRLMVVYHKTG---RVEHVIFKDIIQYFNEKDTFI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FN+T VI A+LNG + + + L + P W V P++ I+ G+ L+F
Sbjct: 58 FNDTSVIPARLNGNK----EKTGARVEVFLLRELDPIQRIWDVLVDPARKIRIGNKLYFE 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGI--ELERQISLVGTIPLPPYIARKRPIDARD 176
++D + + A +ID + ++ F G ++ + +G +P+P Y+ RK + D
Sbjct: 114 NEDSDT-IVAEIIDNTTSRGRIIRFLYDGPYESFKKILYNLGNMPIPDYLDRK--VTKED 170
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YAK +G+V AP AGLHF+ L+ RL G ++ F+T+H G G F + VED
Sbjct: 171 RERYQTIYAKNEGAVVAPAAGLHFSHELMKRLELKGCELTFITVHSGMGNFRAIDVEDLF 230
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLL---ETATTEDGIINPWSGFT 293
+ SE I+ TA +N K +I +VGT+ LR + E T G +NP++G+T
Sbjct: 231 KYKSESERIVINTETATKINQAKQNRKQICAVGTSVLRTIEDRENVVTSQGYLNPFTGWT 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
N FI P Y F L++ FHLP S++L+ V+AF G + +Y+ AI YRF YGD
Sbjct: 291 NKFIFPPYNFITSTSLITGFHLPLSSMLLQVAAFGGFDLIMDVYKQAIEAKYRFGVYGDA 350
Query: 354 SLLF 357
L+
Sbjct: 351 MLII 354
>gi|116625409|ref|YP_827565.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Solibacter usitatus Ellin6076]
gi|122252302|sp|Q01SU0|QUEA_SOLUE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|116228571|gb|ABJ87280.1| Queuosine biosynthesis protein [Candidatus Solibacter usitatus
Ellin6076]
Length = 352
Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats.
Identities = 138/370 (37%), Positives = 194/370 (52%), Gaps = 33/370 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EFD+ LP IA + R ++R++VVH D DLP FL D +V
Sbjct: 1 MNLSEFDYHLPDELIAQEALADRAASRMLVVHREQGRW---EDRCFRDLPEFLRPGDCLV 57
Query: 61 FNNTKVITAQLNGVR------------FCHINRREKEISCTLHMRVSPN--SWSVYARPS 106
N+++V A+L G R + L VS + W RP
Sbjct: 58 LNDSRVFPARLFGHRSGVHSLAVGKNNPKRHEFLSGAVEVFLLRAVSQDGRDWQALVRPG 117
Query: 107 KVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYI 166
+ ++ G+ + F LEA +I + GE + F SG +L +G +PLPPYI
Sbjct: 118 RKMRTGERIVF-----DEGLEAEIIARGEFGERTVRFLGSG-DLYAAFDRIGHVPLPPYI 171
Query: 167 ARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGT 226
KR D YQT +A+ +GSVAAPTAGLHFT ++ R + G V VTLHVG GT
Sbjct: 172 --KRDDSPADRERYQTVFAREKGSVAAPTAGLHFTPEVIERCQAAGADVATVTLHVGLGT 229
Query: 227 FMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII 286
F P+ E ++ +H+E I A A + + R+V+VGTTS+R LETA DG++
Sbjct: 230 FQPLHQEVVEEVKLHTEHYRITADNAGKIGAA----TRVVAVGTTSVRTLETAAR-DGVL 284
Query: 287 NPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYR 346
G T+IF+ PG FR +++NFHLP+++LL+LVSAF G + Y+HA+ YR
Sbjct: 285 ---EGETDIFLYPGVPFRRTGAMLTNFHLPRTSLLVLVSAFAGKDLMLAAYRHAVEARYR 341
Query: 347 FYSYGDTSLL 356
FYSYGD L+
Sbjct: 342 FYSYGDCMLI 351
>gi|149202089|ref|ZP_01879062.1| Queuosine biosynthesis protein [Roseovarius sp. TM1035]
gi|149144187|gb|EDM32218.1| Queuosine biosynthesis protein [Roseovarius sp. TM1035]
Length = 362
Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats.
Identities = 163/360 (45%), Positives = 224/360 (62%), Gaps = 13/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP + IA RP PR +ARL+V I+D V+DL +L D +V
Sbjct: 1 MKLSDFDFDLPEALIATRPARPRRAARLLVAEGEG-----ITDAGVADLGRWLRPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHI--NRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N+T+VI A+L+G+R +I TL + SW +P K + +G+ + F
Sbjct: 56 LNDTRVIPARLSGLRHRSGAQGDTAAKIEVTLLEPGADGSWGALIKPLKKVSEGEEIVF- 114
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
RL A ++ K G+ L F++ G + + ++ G +PLPPYIA +RP D +D V
Sbjct: 115 ----SERLSAVLLAK-EEGQGRLRFNLVGDDFDAALAEAGAMPLPPYIAARRPADEQDKV 169
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ G+VAAPTA LHF LL+ L ++G+ VTLHVGAGTF+PVKVED H
Sbjct: 170 DYQTVWARAPGAVAAPTASLHFDEALLAELAALGVGFSHVTLHVGAGTFLPVKVEDVTTH 229
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH+E G + A A + + ++ GGRI+ VGTT+LRL+ETA G I WSG T+IFI
Sbjct: 230 RMHAEWGEVSAKAAAEMAATRAAGGRIIPVGTTALRLIETAARATGEIAAWSGDTDIFIY 289
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ FR D LM+NFHLPKSTL+MLVSA G + +++Y HA++ YRF+SYGD SLL
Sbjct: 290 PGFEFRVADALMTNFHLPKSTLMMLVSALMGQDTIRRIYAHAVAARYRFFSYGDASLLIP 349
>gi|254167600|ref|ZP_04874451.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Aciduliprofundum boonei T469]
gi|289596968|ref|YP_003483664.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Aciduliprofundum boonei T469]
gi|197623409|gb|EDY35973.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Aciduliprofundum boonei T469]
gi|289534755|gb|ADD09102.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Aciduliprofundum boonei T469]
Length = 332
Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats.
Identities = 137/357 (38%), Positives = 204/357 (57%), Gaps = 30/357 (8%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +DF+LP IA PV PRD ARLMV+ I +LP +++ D ++ N
Sbjct: 4 LRNYDFELPEELIAQEPVEPRDHARLMVLRKG------IEHRYFYNLPEYMDKGDVLILN 57
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKVI A++ G++ ++ + ++ N + K I G +L F G
Sbjct: 58 DTKVIKARIRGIK-----DTGGKVEILILEKLGENYYRCLV-KGKKIHPGSVLIFEDIKG 111
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
V+ + N G + FS ++L R G +PLPPYI P DA YQT
Sbjct: 112 -------VVREKNEGICDIEFSGDIMDLAR---RRGEVPLPPYIKNP-PTDAE--EKYQT 158
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
+A+ +G+VAAPTAGLHFT LL + G+K+ ++TLHV GTF PVK ED +H +
Sbjct: 159 VFARREGAVAAPTAGLHFTPQLLKEIEKKGVKIGYITLHVSYGTFKPVKTEDIREHRVDE 218
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E + A+ +N R GR+ +VGTT R LE+ ++++GII P G+T IFI PGY+
Sbjct: 219 EYYIVGEEVAKLIN---EREGRLFAVGTTVTRALES-SSKNGIIYPSRGYTIIFIYPGYK 274
Query: 303 FRA-VDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F++ +D L++NFH+P+S+L++LV+AF G E K Y+ AI YRFYS+GD L+F+
Sbjct: 275 FQSGIDALITNFHVPRSSLILLVTAFGGYERIMKAYRIAIEKKYRFYSFGDAMLIFK 331
>gi|238650431|ref|YP_002916283.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
peacockii str. Rustic]
gi|259551484|sp|C4K0Y4|QUEA_RICPU RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|238624529|gb|ACR47235.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
peacockii str. Rustic]
Length = 365
Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats.
Identities = 146/387 (37%), Positives = 219/387 (56%), Gaps = 50/387 (12%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA P RD++ L++ + ++ +L D +V
Sbjct: 1 MKLSDFDFDLPSELIAQYPSSERDNSDLLI------AVTPLIKTKFYNIIDYLKEGDLLV 54
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KVI A+LN K I+ L+ ++S +SWS +A+P++ + D +F
Sbjct: 55 FNNSKVIKAKLN---------LGKNITINLNQKLSDDSWSAFAKPARKLHVNDEFYF--- 102
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI-------- 172
+ + +K GEI + F ++ I + ++ G +PLP YI R +
Sbjct: 103 ---DNHKVIITEKLAMGEIKVKFELNDISVFEFLNKYGEMPLPVYIRRSHSLCHPVATTT 159
Query: 173 --------------------DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIG 212
D YQT Y++I+GSVAAPTAGLHFT ++L +L + G
Sbjct: 160 GSKTYLNNDWIPWSNHGMTNTQNDNDRYQTVYSQIEGSVAAPTAGLHFTKDILDKLKAEG 219
Query: 213 IKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTS 272
I+ F+TLHVGAGTF+PVK E+ +H MH+E I TA+ +N K G RI++VGTT+
Sbjct: 220 IQATFLTLHVGAGTFLPVKTENIHEHKMHTEYCSITPDTAEIINKAKQEGKRIIAVGTTT 279
Query: 273 LRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEE 332
LR LE+ + +GI+ S T+IFITPG++F+ D+L++NFH PKSTL ML+ AF G +E
Sbjct: 280 LRTLES-SCNNGIVKAGSFKTDIFITPGFKFQTADMLLTNFHFPKSTLFMLICAFAGFKE 338
Query: 333 TKKMYQHAISHAYRFYSYGDTSLLFQK 359
++Y++AI A RF+SYGD +LL +K
Sbjct: 339 MHELYKYAIKEAMRFFSYGDATLLCRK 365
>gi|78188896|ref|YP_379234.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Chlorobium
chlorochromatii CaD3]
gi|78171095|gb|ABB28191.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Chlorobium
chlorochromatii CaD3]
Length = 346
Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats.
Identities = 119/359 (33%), Positives = 185/359 (51%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F ++LP +IA PRD+ +LMV++ I D+ ++L D +V
Sbjct: 1 MRLSNFRYNLPRHKIANELCEPRDNCKLMVLNRRK---KEIEHKQFEDIASYLKKGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
NN+KV A++ G + + + +I L ++ W V P++ ++ G+ ++F
Sbjct: 58 LNNSKVFPAKIFGQK----EKTDAKIEVFLLRVLNKEAGLWDVLVDPARKVRVGNKIYF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ + A V+D + + F I + + +GTIPLPPY R D
Sbjct: 113 ----EEDVVAEVVDNTTSRGRTIRFLNPDINVFELVDRIGTIPLPPYFN--RAPRPSDKE 166
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT +A G+V AP AGLHFT L + +G+K+ +TLH TF ++VED H
Sbjct: 167 HYQTVFASEIGAVVAPMAGLHFTMPQLQAIQKMGVKILPITLHPSLSTFSAIEVEDVSKH 226
Query: 239 IMHSEIGFIDAPTAQALNSVK-SRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
M SE I TA +N K S+ GR+++VGTT+ R+LE T DG I G+T+ FI
Sbjct: 227 KMDSEYFHIPYQTAMEINETKLSKSGRVIAVGTTTCRVLEANATVDGKIKFGKGWTDKFI 286
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
P Y+F+ D L++ F LP++TL+M VSAF Y+ A+ Y+F +YGD +
Sbjct: 287 YPPYQFKVTDCLLTTFQLPETTLMMAVSAFADHRLLMDAYKIALKEDYQFLAYGDMMFI 345
>gi|282855627|ref|ZP_06264941.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pyramidobacter piscolens W5455]
gi|282586557|gb|EFB91811.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pyramidobacter piscolens W5455]
Length = 349
Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats.
Identities = 121/352 (34%), Positives = 179/352 (50%), Gaps = 14/352 (3%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
+D++LPP IA +P PRD RL+ V + D+ +L D +V N+T+
Sbjct: 12 YDYELPPELIAQKPAEPRDRCRLLAVRRADGK---LFHQHFHDILQWLRPGDVLVRNDTR 68
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSR 125
V+ A++ GV+ + EI S W RP + + +G +
Sbjct: 69 VMAARVEGVKVNG--SAQAEILLLRPEDDSEKCWEALVRPGRKLPEGARVRL-----DGD 121
Query: 126 LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYA 185
+ T+ + + V + ++ G++PLPPYI + + DYQT YA
Sbjct: 122 VVVTIGAVKSEDGVRRVIFPADCDVRALAEANGSMPLPPYIHER----SSRPEDYQTVYA 177
Query: 186 KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIG 245
K S AAPTAGLHFT LL + G+ + +TL VG GTF PVK ED H MHSE
Sbjct: 178 KDPRSAAAPTAGLHFTRELLREVAGRGVTIADITLEVGLGTFRPVKTEDIRRHHMHSEHC 237
Query: 246 FIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRA 305
+ + K GGR++++GTT +R LE + P T +FI PG++++
Sbjct: 238 VVPQDAYDKIVMAKKNGGRVIALGTTVVRTLEGMAATSAGLRPGVLETGLFIYPGFKYKV 297
Query: 306 VDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
VD L++NFHLPKSTL+MLV+AF G + T K Y A+ YRF+S+GD ++
Sbjct: 298 VDALITNFHLPKSTLMMLVAAFAGYDLTMKAYAEAVKERYRFFSFGDAMMIM 349
>gi|46581752|ref|YP_012560.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Desulfovibrio vulgaris str. Hildenborough]
gi|81566078|sp|Q725S3|QUEA_DESVH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|46451175|gb|AAS97820.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Desulfovibrio vulgaris str. Hildenborough]
gi|311235379|gb|ADP88233.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfovibrio vulgaris RCH1]
Length = 371
Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats.
Identities = 139/376 (36%), Positives = 193/376 (51%), Gaps = 37/376 (9%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D++LP RIA P R +RL+V+ + +DL L +V
Sbjct: 11 LLSGYDYELPEDRIAQHPPVERGLSRLLVLDRTTGERI---HARFADLAEHLPEGALLVA 67
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSV-------------------Y 102
NN+KV+ A+L G R ++ L + +
Sbjct: 68 NNSKVLPARLLGHRP-----TGGKVEFLLLTPLPLVTPLAAGPASGTVEPGWCVAEVEGL 122
Query: 103 ARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPL 162
R SK ++ GD L F L V+ K G +++ G EL + G +PL
Sbjct: 123 LRASKPLRPGDTLSFGDD-----LRVEVVHKGEFGRSMVLLFWRG-ELATLFAREGHLPL 176
Query: 163 PPYIARKRPIDARDYVDYQTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTL 220
PPYI R + RD YQT +A+ GSVAAPTAGLHFT +L L + G + VTL
Sbjct: 177 PPYIRRADGDEDRD--RYQTVFAREDRLGSVAAPTAGLHFTPSLRETLTARGHQWAEVTL 234
Query: 221 HVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT 280
+VG GTF PV+ D DH MH E + A T + + K+ G +V+VGTTS R+LE
Sbjct: 235 YVGYGTFSPVRCADIRDHAMHREYVEVTAETVEVIRRAKADGRPVVAVGTTSCRVLEGVA 294
Query: 281 TEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHA 340
T G + P++G+T+IF+ PGY F+ VD L++NFHLP+S+LLMLVSAF G E Y+ A
Sbjct: 295 TAKGTLEPYAGWTDIFMYPGYTFKVVDHLITNFHLPESSLLMLVSAFAGRERVLATYREA 354
Query: 341 ISHAYRFYSYGDTSLL 356
I YRF+SYGD LL
Sbjct: 355 IEEGYRFFSYGDAMLL 370
>gi|74318092|ref|YP_315832.1| queuosine biosynthesis protein [Thiobacillus denitrificans ATCC
25259]
gi|91207332|sp|Q3SH62|QUEA_THIDA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|74057587|gb|AAZ98027.1| queuosine biosynthesis protein [Thiobacillus denitrificans ATCC
25259]
Length = 344
Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats.
Identities = 146/356 (41%), Positives = 196/356 (55%), Gaps = 21/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FDF+LPP IA P R ++RL+ V + + D + +LP L ++D +V
Sbjct: 1 MRVADFDFELPPDLIAQFPPDVRGASRLLHV----TAAGALHDRMFRELPTLLGADDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A+L G + + + + R S K G +
Sbjct: 57 MNDTRVIKARLFGEKDS-----GGRVELLVERVTGEFEALAFIRASHAPKPGARIRLADD 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ V+DK + L + + G +PLPPYI D Y
Sbjct: 112 -----VALDVLDKQHDLTRLHFP----APVLDVLDRCGRLPLPPYIEH--APTEEDEARY 160
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA G+VAAPTAGLHF + +L L + G++ VTLHVGAGTF PV+V + DH+M
Sbjct: 161 QTVYANEPGAVAAPTAGLHFDAAMLGTLQTQGVRTARVTLHVGAGTFQPVRVAEVADHVM 220
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A T A+ ++RGGR+V+VGTTSLR LE A+ G + G T IFITPG
Sbjct: 221 HSERYTVPAATVAAIAETRARGGRVVAVGTTSLRALEAASAS-GSVEAGVGETAIFITPG 279
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
YRFR VD L++NFHLP+STLLMLVSAF GIE ++ Y HAI+ YRF+SYGD L
Sbjct: 280 YRFRTVDALVTNFHLPRSTLLMLVSAFSGIETIRRAYAHAIAERYRFFSYGDAMFL 335
>gi|167571173|ref|ZP_02364047.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia oklahomensis C6786]
Length = 351
Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats.
Identities = 139/362 (38%), Positives = 195/362 (53%), Gaps = 21/362 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDFDLPP IA + R ++RL+ V N S P + D ++LPA + D +VF
Sbjct: 3 TLSDFDFDLPPELIAQTALPERSASRLLEVD-NTSEPPRLVDRRFAELPACVAPGDLLVF 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKV+ A+ G + I + + R SK G L
Sbjct: 62 NDTKVLKARFFGHKAS-----GGRIEVLIERVTGARTALAQIRASKRPAPGTTLTLADA- 115
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ATV ++ L + I G +PLPPYI DA D YQ
Sbjct: 116 ----FDATVGERVEPFFTLHFPE----DCLGLIERYGRLPLPPYIEH--TPDATDETRYQ 165
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H MH
Sbjct: 166 TVFAANPGAVAAPTAGLHFDDAVLAALDARGVERATLTLHVGAGTFQPVRVENLAEHKMH 225
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSL----RLLETATTEDGIINPWSGFTNIFI 297
E + + + + ++RGGR+++VGTTS+ A ++ T+IFI
Sbjct: 226 REWYELTGALVEKIAATRARGGRVIAVGTTSMRALEAAARDAEAAGRPLSATRAETDIFI 285
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPGYRFR VD L++NFHLPKSTLLMLVSAF G++ + Y+HAI+ YRF+SYGD LL
Sbjct: 286 TPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVDTIRAAYRHAIAARYRFFSYGDAMLLT 345
Query: 358 QK 359
++
Sbjct: 346 RR 347
>gi|307718815|ref|YP_003874347.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Spirochaeta thermophila DSM 6192]
gi|306532540|gb|ADN02074.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA
[Spirochaeta thermophila DSM 6192]
Length = 351
Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats.
Identities = 134/357 (37%), Positives = 187/357 (52%), Gaps = 20/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +K+F FDLP IA P R+ ARLMVVH I V +LP L +V
Sbjct: 15 MKLKDFYFDLPEELIAQHPAQRREDARLMVVHRETG---RIEHAHVRELPWILPP-SCLV 70
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+V ++L R ++ L V P+ W ++ + G +
Sbjct: 71 FNDTRVRKSRLLATR----RDSGGKVEILLLEEVEPSLWKAVVSRARRQRPGVVYELPGG 126
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
EA ++ G L+ S E+ + G +PLPPYI R + D Y
Sbjct: 127 R-----EAEIVGM-EEGLRLVRISPPIDEV--YLDRHGHVPLPPYIKRSDLPE--DEERY 176
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ GS AAPTAGLHFT L+ L S V F+TLHVG GTF PV+ E+ ++H M
Sbjct: 177 QTVFARHPGSAAAPTAGLHFTPALMDELKSRHT-VTFLTLHVGLGTFQPVRTENVEEHRM 235
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E +I TA+ + KS+ + +VGTT+ R LE+A E G + T+++I PG
Sbjct: 236 HKERFYIPEETARVIEGAKSQHIPVCAVGTTTTRALESAW-EHGRLKRGWQETSLYIYPG 294
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y FR +D L +NFH P S+L++LVSAF G + + Y+ AI H YRF+SYGD L+
Sbjct: 295 YTFRVIDRLFTNFHTPGSSLVLLVSAFLGKDLLLEAYRKAIEHRYRFFSYGDAMLII 351
>gi|254167112|ref|ZP_04873965.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Aciduliprofundum boonei T469]
gi|197623968|gb|EDY36530.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Aciduliprofundum boonei T469]
Length = 332
Score = 394 bits (1014), Expect = e-108, Method: Composition-based stats.
Identities = 136/357 (38%), Positives = 204/357 (57%), Gaps = 30/357 (8%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +DF+LP IA PV PRD ARLMV+ I +LP +++ D ++ N
Sbjct: 4 LRNYDFELPEELIAQEPVEPRDHARLMVLRKG------IEHRYFYNLPEYMDKGDVLILN 57
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKVI A++ G++ ++ + ++S N + K I G +L F G
Sbjct: 58 DTKVIKARIRGIK-----DTGGKVEILILEKLSENYYRCLV-KGKKIHPGSVLIFEDIKG 111
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
V+ + N G + FS ++L R G +PLPPYI P DA YQT
Sbjct: 112 -------VVREKNEGICEIEFSGDIMDLAR---RRGEVPLPPYIKNP-PNDAE--EKYQT 158
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
+A+ +G+VAAPTAGLHFT LL + G+K+ ++TLHV TF PVK ED +H +
Sbjct: 159 VFARREGAVAAPTAGLHFTPQLLKEIEKKGVKIGYITLHVSYSTFKPVKTEDIREHKVDE 218
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E + ++ +N R GR+ +VGTT R LE+ ++++GII P G+TNIFI GY+
Sbjct: 219 EYYIVGEEVSKLIN---EREGRLFAVGTTVTRALES-SSKNGIIYPSHGYTNIFIYSGYK 274
Query: 303 FRA-VDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F++ +D L++NFH+P+S+L++LV+AF G E K Y+ AI YRFYS+GD L+F+
Sbjct: 275 FQSGIDALITNFHVPRSSLILLVTAFGGYERIMKAYRIAIEKKYRFYSFGDAMLIFK 331
>gi|294651474|ref|ZP_06728787.1| queuine tRNA-ribosyltransferase [Acinetobacter haemolyticus ATCC
19194]
gi|292822624|gb|EFF81514.1| queuine tRNA-ribosyltransferase [Acinetobacter haemolyticus ATCC
19194]
Length = 349
Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats.
Identities = 135/359 (37%), Positives = 193/359 (53%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F FDLP IA P+ R ++RL+ + DH +D+ L D +V
Sbjct: 6 MQLSDFSFDLPDELIAPYPLESRSASRLLHID----AQGHYHDHAFTDILDLLEEGDLLV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G R I + + ++ + + S K G L+
Sbjct: 62 LNDTKVMKARLKGKRA-----TGGAIEVLVERILDTHTAHCHIKSSNSPKAGAELYI--- 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ + TV + L V S L + G +P+PPY R+ + D Y
Sbjct: 114 -GEDAVPVTVQGRHEN---LFVVKFSQPIL-SVLDQYGQLPIPPYFNRE--AEEIDTERY 166
Query: 181 QTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
QT + + SVAAPTA LHF +LL +L + G++ FVTLHVGAGTFMPV+ D +H
Sbjct: 167 QTVFHDPEKIASVAAPTASLHFDQSLLEKLATKGVQKTFVTLHVGAGTFMPVRTTDITNH 226
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFI 297
IMHSE + T + + K+RG ++++VGTT+ R LE+A + G I W+G T IFI
Sbjct: 227 IMHSEWCDVPQATIDLILATKARGNKVIAVGTTATRALESAAQANQGQIAAWTGDTQIFI 286
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+F VD L++NFHLP+STLLMLVSA + Y+HA+ YRF+SYGD L+
Sbjct: 287 YPGYQFCIVDRLITNFHLPESTLLMLVSALSNRDNILAAYKHAVEQRYRFFSYGDAMLI 345
>gi|257094069|ref|YP_003167710.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257046593|gb|ACV35781.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 343
Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats.
Identities = 141/359 (39%), Positives = 199/359 (55%), Gaps = 17/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FDFDLP IA +P R ++RL+ + + D S+LP +++ D +V
Sbjct: 2 LTIDDFDFDLPTELIAQQPTPERTASRLLEL-----ADGGLHDRRFSELPQLVDAGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G + +I + + R SK K G +
Sbjct: 57 FNDTRVIRARLFGHKES-----GGQIEVLIERIIDARHALAQIRASKSPKPGSRIVLEDA 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ GE + +L I G +PLPPYI D D Y
Sbjct: 112 IALN----VCGRSGKHGEFFALELAGPGDLWTLIERHGRLPLPPYITHAAGSD--DEARY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ G+VAAPTAGLHF LL +L + ++V ++TLHVGAGTF PV+V +H M
Sbjct: 166 QTVFARQPGAVAAPTAGLHFDDALLGQLAACSVEVAWLTLHVGAGTFQPVRVHAVAEHRM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E I T A+ ++R G++++VGTTSLR LE A +DG + + T+IFITPG
Sbjct: 226 HAERFEIPPATIAAIARTRARAGKVIAVGTTSLRALEAAA-QDGELRAGAAETDIFITPG 284
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
YRF+ VD L++NFHLPKSTLLMLVSAF G++ + Y HAI H YRF+SYGD LL ++
Sbjct: 285 YRFQVVDRLITNFHLPKSTLLMLVSAFAGLDAIRTAYAHAIRHGYRFFSYGDAMLLSRE 343
>gi|159899314|ref|YP_001545561.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Herpetosiphon aurantiacus ATCC 23779]
gi|159892353|gb|ABX05433.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Herpetosiphon aurantiacus ATCC 23779]
Length = 346
Score = 394 bits (1013), Expect = e-107, Method: Composition-based stats.
Identities = 125/361 (34%), Positives = 197/361 (54%), Gaps = 24/361 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FD+ LPP RIA P+ PRD +RL+V+ + ++ +L D +V N
Sbjct: 4 IADFDYHLPPERIAQTPIEPRDHSRLLVLDRATG---QLEHRHFYEIGRYLRPGDLLVAN 60
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+++V+ A+L G + + L + W + + G L G
Sbjct: 61 DSRVLPARLYGQKAS-----GGKTELLLLKQRDAQRWEALIK--GKVAVGTRLIITGHRG 113
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
++++ATV + +G ++ F + ++ +G++P PPYI D YQT
Sbjct: 114 -AQVQATVEELLESGSRIICFEQP---INDRLPELGSMPTPPYITAPLT----DPERYQT 165
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
Y+ GS AAPTAGLH+T L+ ++ ++G+ VTLHVG TF PV+ E+ DH +HS
Sbjct: 166 VYSAQAGSAAAPTAGLHWTPALIEQVKALGVGWASVTLHVGLDTFRPVQTENALDHQIHS 225
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED------GIINPWSGFTNIF 296
E + A TAQA+N+ ++ GGRI++VGTTS R+LET + G I +G+++I+
Sbjct: 226 EWYELSAETAQAINATRAAGGRIITVGTTSTRVLETVSQSQDVSLTAGEIQAAAGWSSIY 285
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y +R V+ L++NFHLPKSTLL+LVSA + + Y A+ YRF+S+GD L+
Sbjct: 286 IYPPYEYRVVNSLITNFHLPKSTLLLLVSALASRDLIMQAYAEAVERQYRFFSFGDAMLI 345
Query: 357 F 357
Sbjct: 346 I 346
>gi|294101858|ref|YP_003553716.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Aminobacterium colombiense DSM 12261]
gi|293616838|gb|ADE56992.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Aminobacterium colombiense DSM 12261]
Length = 349
Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats.
Identities = 128/358 (35%), Positives = 181/358 (50%), Gaps = 21/358 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ + +DLP RIA P PR+ +RL+V+ N + +L FL D IV N
Sbjct: 8 IESYAYDLPEGRIAQTPASPRNHSRLLVLDKNSGTMI---HSRFYELHRFLKEGDVIVLN 64
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFFSQ 120
+T+VI A+L GV+ R L + W RP + ++ G I+
Sbjct: 65 DTRVIPARLFGVKEKGSARA----EILLLKPLDGLWKRWEALVRPGRRLRPGSIVIVRED 120
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ V + G ++ F L + VG IP PPYI +DY
Sbjct: 121 -----IPVQVQEALADGVRVVRFPEECNVL-SLLEEVGEIPFPPYIKSTTAT----ALDY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIG-IKVYFVTLHVGAGTFMPVKVEDTDDHI 239
QT +AK GS AAPTA LHFT N L L I +VTLHVG GTF PV+ ED H+
Sbjct: 171 QTVFAKRNGSSAAPTASLHFTENQLRDLEDKHGITFAWVTLHVGLGTFRPVQEEDIRQHV 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPW-SGFTNIFIT 298
+H E + TA + K G RI++ GTT R LE+ T D + + T++FI
Sbjct: 231 IHEEYCEVPEETAALIRKAKEEGRRIIASGTTVARTLESMATHDENVVQYGRKNTSLFIY 290
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
P Y+F +D L++NFHLP+STLLMLV+A G + ++Y+ A+ YRF+S+GD L+
Sbjct: 291 PAYQFSVIDGLITNFHLPRSTLLMLVAALAGYDNIMEVYETAVKMGYRFFSFGDAMLI 348
>gi|300726827|ref|ZP_07060257.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
bryantii B14]
gi|299775940|gb|EFI72520.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
bryantii B14]
Length = 387
Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats.
Identities = 120/393 (30%), Positives = 180/393 (45%), Gaps = 42/393 (10%)
Query: 1 MMVKEFDFDLPPSRIALRP-----------------VFPRDSARLMVVHPNLSCPLVISD 43
M + +F F LP +IAL P V RD +LMV+H +
Sbjct: 1 MKLSQFKFKLPQDQIALYPHQVEKTIKTSSGEKTFTVTRRDECKLMVLHKKSETIDIFKK 60
Query: 44 HL-----------VSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHM 92
++ + + D V N+TKV A+L G + + + +I L
Sbjct: 61 DSNGNDIQGEYLDFRNVLDYFDDGDTFVLNDTKVFPARLYGTK----EKTDAKIEVFLLR 116
Query: 93 RVSP--NSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSIS--GI 148
++ W V P++ I+ G+ L F D + A VID + L F
Sbjct: 117 ELNEEMRLWDVLVEPARKIRIGNKLFF---DDSGSMVAEVIDNTTSRGRTLRFLYDSPHE 173
Query: 149 ELERQISLVGTIPLPPYIARKRPI---DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLL 205
E ++ + +G PLP Y+ R D D+Q +AK +G+V AP GLHF+ L+
Sbjct: 174 EFKQNLYALGEAPLPRYVIDSREDHHATVDDLDDFQCVFAKNEGAVTAPATGLHFSRELM 233
Query: 206 SRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRI 265
R+ GI F+TLH G G F ++VED H M SE I +N K G R+
Sbjct: 234 KRMEIKGINTAFITLHCGLGNFHDIEVEDLTKHKMDSEQMIIGREACDLVNDTKKAGHRV 293
Query: 266 VSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVS 325
+VGT+ ++ ETA DG + + G+TN FI P Y F D +++NF+ P+STLLM +
Sbjct: 294 CAVGTSVVKATETAVGTDGFLKEYDGWTNKFIFPPYDFGLADSMLANFYHPESTLLMETA 353
Query: 326 AFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
AF G + + Y A+ + Y+F YGD L+
Sbjct: 354 AFGGYDLVMEAYHKALENGYKFGCYGDAMLILN 386
>gi|34580774|ref|ZP_00142254.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
sibirica 246]
gi|28262159|gb|EAA25663.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
sibirica 246]
Length = 365
Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats.
Identities = 146/387 (37%), Positives = 217/387 (56%), Gaps = 50/387 (12%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA P RD++ L++ ++ +L D +V
Sbjct: 1 MKLSDFDFDLPSELIAQYPSSERDNSDLLI------AVTPPIKTKFYNIIDYLKEGDLLV 54
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KVI A+LN K I+ L+ ++S +SWS +A+P++ + D +F
Sbjct: 55 FNNSKVIKAKLN---------LGKNITINLNQKLSDDSWSAFAKPARKLHVNDEFYF--- 102
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI-------- 172
+ + +K GEI + F ++ I + ++ G +PLP YI R +
Sbjct: 103 ---DNHKVIITEKLAMGEIKVKFELNDISVFEFLNKYGEMPLPVYIRRSHSLCHPVATTT 159
Query: 173 --------------------DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIG 212
D YQT Y++I+GSVAAPTAGLHFT ++L +L + G
Sbjct: 160 GSKAYLNNDWIPWSNHGMTNTQNDNDRYQTVYSQIEGSVAAPTAGLHFTKDILDKLKAEG 219
Query: 213 IKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTS 272
I+ F+TLHVGAGTF+PVK E+ +H MH+E I TA +N K G RI++VGTT+
Sbjct: 220 IQATFLTLHVGAGTFLPVKTENIHEHKMHTEYCSITPDTADIINKAKQEGKRIIAVGTTT 279
Query: 273 LRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEE 332
LR LE+ + +GI+ S T+IFITPG++F+ D+L++NFH PKSTL ML+ AF G +E
Sbjct: 280 LRTLES-SCNNGIVKAGSFKTDIFITPGFKFQTADMLLTNFHFPKSTLFMLICAFAGFKE 338
Query: 333 TKKMYQHAISHAYRFYSYGDTSLLFQK 359
++Y++AI A RF+SYGD +LL +K
Sbjct: 339 MHELYKYAIKEAMRFFSYGDATLLCRK 365
>gi|328954311|ref|YP_004371645.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Desulfobacca acetoxidans DSM 11109]
gi|328454635|gb|AEB10464.1| S-adenosylmethionine:tRNAribosyltransferase-isom erase
[Desulfobacca acetoxidans DSM 11109]
Length = 353
Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats.
Identities = 142/369 (38%), Positives = 203/369 (55%), Gaps = 28/369 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M + ++D+ LPP IA P+ RD AR++V+ VI + LP FL+ D
Sbjct: 1 MKMYSINDYDYHLPPQLIAQEPLPQRDQARMLVLERAAG---VIRHCRFTQLPEFLSDRD 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN---------SWSVYARPSKV 108
+V NNT+V A+L G + + L +P + R SK
Sbjct: 58 VLVVNNTQVFPARLRGCKAS-----GGRVEVLLLQPPTPEGNGDVPRQARVPAWYRASKP 112
Query: 109 IKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIAR 168
K G +L+F + LE + GEI L+ G ++ + ++ G +PLPPYI
Sbjct: 113 PKVGQMLNFGLE-----LEGEITAVGPAGEITLLLQSQGRDIRQVVAEAGAMPLPPYI-- 165
Query: 169 KRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFM 228
+R D + YQT +A G++AAPTAGLHFT LL +L + G++V +TLHVG GTF
Sbjct: 166 RRLAGPEDTLRYQTIFAHRLGAIAAPTAGLHFTPALLHQLEAGGVEVVSLTLHVGPGTFQ 225
Query: 229 PVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINP 288
PV+ ED H + E + A +A A+N ++ G IV+VGTT++R+LE+ + G +
Sbjct: 226 PVREEDYSRHRLAPEYFLLSAESAAAINRARAGGKHIVAVGTTTVRVLESQYCQ-GQVFA 284
Query: 289 WSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
G+ ++FI P YRF VD L++NFHLPKSTLL+LVSAF G E + YQ AI+ YRFY
Sbjct: 285 GEGYCDLFIYPRYRFNVVDRLITNFHLPKSTLLLLVSAFAGREFVLRAYQEAIAARYRFY 344
Query: 349 SYGDTSLLF 357
SYGD L+
Sbjct: 345 SYGDCMLII 353
>gi|15892206|ref|NP_359920.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
conorii str. Malish 7]
gi|21263890|sp|Q92IY7|QUEA_RICCN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|15619340|gb|AAL02821.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
conorii str. Malish 7]
Length = 365
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 145/387 (37%), Positives = 218/387 (56%), Gaps = 50/387 (12%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA P RD++ L++ ++ +L D +V
Sbjct: 1 MKLSDFDFDLPSELIAQYPSSERDNSDLLI------AVTPPIKTKFYNIIDYLKEGDLLV 54
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KVI A+LN K I+ L+ ++S ++WS +A+P++ + D +F
Sbjct: 55 FNNSKVIKAKLN---------LGKNITINLNQKLSDDNWSAFAKPARKLHVNDEFYF--- 102
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI-------- 172
+ + +K GEI + F ++ I + ++ G +PLP YI R +
Sbjct: 103 ---DNHKVIITEKLAMGEIKVKFELNDISVFEFLNKYGEMPLPVYIRRSHSLCHPVATTT 159
Query: 173 --------------------DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIG 212
D YQT Y++I+GSVAAPTAGLHFT ++L +L + G
Sbjct: 160 GSKTYLNNDWIPWSNHGMTNTQNDNDRYQTVYSQIEGSVAAPTAGLHFTKDILDKLKAEG 219
Query: 213 IKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTS 272
I+ F+TLHVGAGTF+PVK E+ +H MH+E I TA+ +N K G RI++VGTT+
Sbjct: 220 IQATFLTLHVGAGTFLPVKTENIHEHKMHTEYCSITPDTAEIINKAKQEGKRIIAVGTTT 279
Query: 273 LRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEE 332
LR LE+ + +GI+ S T+IFITPG++F+ D+L++NFH PKSTL ML+ AF G +E
Sbjct: 280 LRTLES-SCNNGIVKAGSFKTDIFITPGFKFQTADMLLTNFHFPKSTLFMLICAFAGFKE 338
Query: 333 TKKMYQHAISHAYRFYSYGDTSLLFQK 359
++Y++AI A RF+SYGD +LL +K
Sbjct: 339 MHELYKYAIKEAMRFFSYGDATLLCRK 365
>gi|242281282|ref|YP_002993411.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Desulfovibrio salexigens DSM 2638]
gi|242124176|gb|ACS81872.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfovibrio salexigens DSM 2638]
Length = 366
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 131/367 (35%), Positives = 189/367 (51%), Gaps = 29/367 (7%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+K +DF+LP +IA P R ++LMV+ + +D+ L +V N
Sbjct: 15 LKSYDFELPEEQIAQCPAVMRHGSKLMVLDQKTGETEI---KNFTDIVDLLPEGALLVAN 71
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVS-----------PNSWSVYARPSKVIKK 111
N+KV+ A++ G + + L + R SK K
Sbjct: 72 NSKVVPARIFGKKP-----TGGRVEFLLLTPLPLIKAEPTSDGYKAQARGLLRASKGPKT 126
Query: 112 GDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRP 171
GDI++F L+ TV+ K G + SG +L++ G IPLPPYI +R
Sbjct: 127 GDIIYF-----DGGLKLTVLGKGKFGLSEVELEWSG-DLKKIFEECGKIPLPPYI--RRA 178
Query: 172 IDARDYVDYQTTYA--KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
D D YQT YA + GSVAAPTAGLHF+ + +L + I+ VTL+VG GTF P
Sbjct: 179 ADETDNDRYQTLYACDEKAGSVAAPTAGLHFSEEINEKLKAKNIERAEVTLYVGYGTFSP 238
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPW 289
V+ ED DH MH E I TA A+ K G +++VGTTS R LE A + G I +
Sbjct: 239 VRAEDIRDHEMHHEYIEIPEETAAAVIKAKEEGRPVIAVGTTSARTLEGAFQQTGEICEF 298
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
G TNIFI PG+ F+ VD +++NFHLP+S+L++++SA G Y A+ + +RF+S
Sbjct: 299 KGETNIFIYPGFEFKVVDRMITNFHLPESSLVIMISALAGRINVLNAYTEAVDNKFRFFS 358
Query: 350 YGDTSLL 356
YGD+ +
Sbjct: 359 YGDSMYI 365
>gi|291278524|ref|YP_003495359.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Deferribacter desulfuricans SSM1]
gi|290753226|dbj|BAI79603.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Deferribacter desulfuricans SSM1]
Length = 341
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 127/356 (35%), Positives = 186/356 (52%), Gaps = 21/356 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +DF+ + IA P RD +RL+VV+ + D D+ F + N +V N
Sbjct: 6 INRYDFEFDENLIAQYPEKKRDESRLLVVNRQT---NKLLDKRFKDIVDFFDDNMFLVLN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NTKV+ A+L + E+ L ++ + K L+
Sbjct: 63 NTKVLNARLFAKKES-----GGEVEIFLLEQLDGKRFKALL--GGKWKSEGYLYINEYK- 114
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ K + I+ V I E + G +PLPPYI KR + D Y T
Sbjct: 115 ------LFVSKRDDEGIVTVDFIDANPFE-IMDKYGHVPLPPYI--KREDNELDRERYNT 165
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
++K GSVAAPTAGLHFT + +L G++++ +TL+VG GTF PVK E +DH MH
Sbjct: 166 VFSKKIGSVAAPTAGLHFTEEIFDKLKEKGVEIFEITLNVGLGTFRPVKTEFIEDHKMHK 225
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWS-GFTNIFITPGY 301
E I+ A +N +K G ++V+VGTT +R LE+A ++ G I P +T++FI GY
Sbjct: 226 ESFSIEKSVADKINKLKKDGKKLVAVGTTVVRALESAASQFGEITPCENAYTDLFIREGY 285
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+F+ VD +++NFHLPKSTL +LV AF G + KK Y HA+ YRF+SYGD +
Sbjct: 286 QFKVVDKMITNFHLPKSTLFILVCAFGGYDLMKKAYAHAVKDRYRFFSYGDAMFII 341
>gi|157803425|ref|YP_001491974.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
canadensis str. McKiel]
gi|166216748|sp|A8EXV6|QUEA_RICCK RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|157784688|gb|ABV73189.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
canadensis str. McKiel]
Length = 386
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 144/399 (36%), Positives = 216/399 (54%), Gaps = 54/399 (13%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA P RD + L++ ++ +L D +V
Sbjct: 1 MKLSDFDFDLPSELIAQYPSSKRDHSDLLI------AATPPIKTKFYNIIDYLKEGDLLV 54
Query: 61 FNNTKVITAQLNGVRFCHINRR------EKEISC-------------------------- 88
FNN+KVI A+LN + +++ E ++ C
Sbjct: 55 FNNSKVIKAKLNLEKNRPLSKLAYRDKFEGDMECRTAVYTNVREDSSTGSTYKLPLEVEL 114
Query: 89 --------TLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEIL 140
L+ R+S N WS +A+P++ + GD HF + +++K GEI
Sbjct: 115 EKRSNITINLNQRLSNNCWSAFAKPARRLNIGDEFHF------DNHKVIIVEKLAIGEIK 168
Query: 141 LVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHF 200
+ F + I + + G +PLP YI R + YQ Y+ I+GSVAAPTAGLHF
Sbjct: 169 VKFELDDISVFEFLDKYGEMPLPLYI-RHHEAQKSNNERYQNIYSSIEGSVAAPTAGLHF 227
Query: 201 TSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKS 260
T+++L++L + I+ F+TLHVGAGTF+PVK E+ +H MH+E I TA+ +N K
Sbjct: 228 TNDILNKLKAKNIQTTFLTLHVGAGTFLPVKTENIHEHKMHTEYCSITPDTARLINKAKQ 287
Query: 261 RGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTL 320
RI++VGTT+LR LE+ + +G + T+IFITPG++F+ DIL++NFH PKSTL
Sbjct: 288 EKQRIIAVGTTTLRTLES-SCNNGTVKACDFETDIFITPGFKFQTADILLTNFHFPKSTL 346
Query: 321 LMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
ML+ AF G +E K+Y++AI RF+SYGD +LL++K
Sbjct: 347 FMLICAFAGFKEMHKLYKYAIKEKMRFFSYGDATLLYRK 385
>gi|323699683|ref|ZP_08111595.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfovibrio sp. ND132]
gi|323459615|gb|EGB15480.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfovibrio desulfuricans ND132]
Length = 360
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 131/363 (36%), Positives = 189/363 (52%), Gaps = 19/363 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +D+ LP RIA P RD +RL+V+ ++ +DL +L + +V
Sbjct: 8 RLSSYDYPLPEDRIAQEPAARRDGSRLLVLDR---AARSLTPARFTDLLDYLPDDCLLVA 64
Query: 62 NNTKVITAQLNGVRFCHINRR-EKEISCTLHMRVSPNSWSV-----YARPSKVIKKGDIL 115
NN++VI A++ G + L + W R SK K G +
Sbjct: 65 NNSRVIPARVFGRKPTGGQVEFLLLTPLPLLTPEERDGWLTVRAEGLLRASKGPKPGATV 124
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
F + LEA G + G +L + +G +PLPPYI KRP
Sbjct: 125 TFADDFSLTALEA-----GEFGRWQVELRWKG-DLTALFNSLGHLPLPPYI--KRPDVEA 176
Query: 176 DYVDYQTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
D YQTTYA GSVAAPTAGLHFT L R+ + GI+ VTL+VG GTF PV+
Sbjct: 177 DRERYQTTYADRSKTGSVAAPTAGLHFTPELRERIRAKGIQWAEVTLYVGYGTFSPVRCP 236
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
D DH MH+E + TA+A+ K+ G +++VGTTS R LE E G I + G T
Sbjct: 237 DIRDHRMHAEYIEVSEETAEAVRGAKAEGRPVIAVGTTSARTLEGMVREAGSIRQFRGET 296
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI+PGY F+ +D +++NFHLP+S+L++++SA G + Y A+ + +RF+SYGD
Sbjct: 297 DIFISPGYTFKVIDGILTNFHLPESSLIIMISALAGRKTILDAYAFALENDFRFFSYGDA 356
Query: 354 SLL 356
L+
Sbjct: 357 MLI 359
>gi|323344442|ref|ZP_08084667.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
oralis ATCC 33269]
gi|323094569|gb|EFZ37145.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
oralis ATCC 33269]
Length = 388
Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats.
Identities = 124/393 (31%), Positives = 191/393 (48%), Gaps = 43/393 (10%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVHPNLSCPLVIS 42
M + +F F LP ++AL P V RD +RLMV+H +
Sbjct: 1 MKLSQFKFKLPEEQVALYPHSFERKFKNEDGTKETFRVTRRDESRLMVLHKKTQAIEMFK 60
Query: 43 DHL-----------VSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLH 91
++ + + D +FN+TKV A+L G + + + +I L
Sbjct: 61 KDKKGKPIEGDYLDFRNILDYFDEGDTFIFNDTKVFPARLYGTK----EKTDAKIEVFLL 116
Query: 92 MRVSP--NSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGI- 148
++ W V P++ I+ G+ L F D S + A VID + L F
Sbjct: 117 RELNEEMRLWDVLVEPARKIRIGNKLFF---DDTSTMVAEVIDNTTSRGRTLRFLYDCPH 173
Query: 149 -ELERQISLVGTIPLPPYIARKRPID---ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNL 204
E +R++ +G PLP YI R D ++Q +AK +G+V AP GLHF+ L
Sbjct: 174 EEFKRELFALGEAPLPRYIIDNRENHHAVKEDLENFQCIFAKHEGAVTAPATGLHFSREL 233
Query: 205 LSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGR 264
+ R+ GI F+TLH G G F ++VED H M SE IDA + +N+ K G R
Sbjct: 234 MKRMEIRGINFAFITLHCGLGNFHEIEVEDLTKHKMDSEQMIIDAEACEVVNATKKGGHR 293
Query: 265 IVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLV 324
I +VGT+ ++ ETA DG++ +SG+TN FI P Y F + +++NF+ P STLLM
Sbjct: 294 ICAVGTSVVKATETAVGTDGMLKEFSGWTNKFIFPPYDFGLANTMIANFYHPLSTLLMQT 353
Query: 325 SAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+AF G + + Y+ A+ + Y+F +GD+ L+
Sbjct: 354 AAFGGYDLVMQAYEMAVENGYKFGCFGDSLLIL 386
>gi|310822782|ref|YP_003955140.1| s-adenosylmethionine:tRNA ribosyltransferase-isomerase [Stigmatella
aurantiaca DW4/3-1]
gi|309395854|gb|ADO73313.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Stigmatella
aurantiaca DW4/3-1]
Length = 361
Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats.
Identities = 134/370 (36%), Positives = 196/370 (52%), Gaps = 27/370 (7%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ ++DF+LP ++IA P+ RD++RLM V + +DLP+ L D +V
Sbjct: 4 RLSDYDFELPEAQIAQAPLGARDASRLMTVSRSTKAC---EHLRFADLPSLLRPGDVLVV 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN-------------SWSVYARPSKV 108
N+ +VI A+L G + + + + W + SK
Sbjct: 61 NDARVIPARLLGAKV----GTGGRVELLVVRPAASTMTSAALSLAAEAMDWICLGQASKG 116
Query: 109 IKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIAR 168
+K G + F LE ++ + + G L+ + G +PLPPYI R
Sbjct: 117 LKPGAQVAFGGGLVGEVLEGLGGGEY----RVRFQAPPGGSLQALLEQAGRLPLPPYITR 172
Query: 169 KRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFM 228
+ DA D YQT YA+ G+VAAPTAGLHF+ + L + G++ VTL VG GTF+
Sbjct: 173 E--PDAADAERYQTLYARAPGAVAAPTAGLHFSEAIFEALDARGVRRVTVTLDVGPGTFL 230
Query: 229 PVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIIN 287
PV+ E+ D H MH E + TA +N+ ++ G R+V+VGTT +R LE AT G++
Sbjct: 231 PVREEELDRHKMHPERYGVPEQTAAEVNAARAEGRRVVAVGTTVVRTLEAATDPATGLLR 290
Query: 288 PWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
+G T +FI PGY FR VD++++NFHLP+STL+MLVSA G E T YQ A+ YRF
Sbjct: 291 AGTGETVLFIRPGYAFRQVDLMLTNFHLPRSTLVMLVSALLGREHTLAAYQEAVREGYRF 350
Query: 348 YSYGDTSLLF 357
+SYGD L+
Sbjct: 351 FSYGDAMLVT 360
>gi|87309884|ref|ZP_01092018.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Blastopirellula marina DSM 3645]
gi|87287648|gb|EAQ79548.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Blastopirellula marina DSM 3645]
Length = 348
Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats.
Identities = 137/355 (38%), Positives = 195/355 (54%), Gaps = 10/355 (2%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++++D+ LP IA P+ R ARL+VV I + DLP L D +V N
Sbjct: 4 IEQYDYRLPKELIAQEPLEKRADARLLVVDRKSG---QIEHRYIRDLPEILQPTDHLVLN 60
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NTKV+ A+L G R R + W V A+ I G+++ +++
Sbjct: 61 NTKVVPARLVGRRTLTGGRWQG----LYLESDINGHWLVLAKTRGKIAAGEMVTLENRET 116
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ + ++ G + S LE + VG +PLP YI R+ + D+ YQT
Sbjct: 117 KEDISLRLVASLGVGMWAVEPESSESTLE-ILERVGRVPLPHYI-REGEMMPDDWKRYQT 174
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
+A+ G+VAAPTAGLHF++ LL +L + + V +VTLHVG GTF PV V+ D+H+MH
Sbjct: 175 VFAEQPGAVAAPTAGLHFSTELLKKLTNNDLLVDYVTLHVGIGTFRPVSVDQLDEHVMHK 234
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E G I + + K+ GGR ++VGTT R++ETA G + PW G T++FI P +
Sbjct: 235 EWGEIREEAVERILETKAAGGRNIAVGTTVARVMETAARS-GELQPWRGQTDLFIRPPFE 293
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F AVD L++NFHLPKSTLL+LV F G E ++ Y AI YRFYSYGD L+
Sbjct: 294 FHAVDALLTNFHLPKSTLLILVRTFGGEELMREAYAEAIREEYRFYSYGDAMLIL 348
>gi|167580652|ref|ZP_02373526.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia thailandensis TXDOH]
gi|167618756|ref|ZP_02387387.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia thailandensis Bt4]
gi|257137994|ref|ZP_05586256.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia thailandensis E264]
Length = 357
Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats.
Identities = 138/363 (38%), Positives = 194/363 (53%), Gaps = 21/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FDFDLPP IA + R ++RL+ V N S P + D ++LPA + D +V
Sbjct: 2 LTLSDFDFDLPPELIAQTALPERSASRLLEVD-NASAPPRLVDRRFAELPACVAPGDLLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKV+ A+ G + +I + + R SK G L
Sbjct: 61 FNDTKVLKARFFGRKAS-----GGKIEVLIERVTGQRTALAQIRASKSPAPGTTLTLADA 115
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ TV ++ L + I G +PLPPYI DA D Y
Sbjct: 116 -----FDVTVGERVEPFFTLHFPD----DCLVLIERHGRLPLPPYIEH--TPDATDEARY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H M
Sbjct: 165 QTVFAANPGAVAAPTAGLHFDDAVLAALDARGVERATLTLHVGAGTFQPVRVENIAEHRM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSL----RLLETATTEDGIINPWSGFTNIF 296
H E + + + + ++RGGR+++VGTTS+ A + T+IF
Sbjct: 225 HRESYELTDALVEKIAATRARGGRVIAVGTTSMRALEAAARDADAAGRPLAATRAETDIF 284
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFR VD L++NFHLPKSTLLMLVSAF G++ + Y+HAI YRF+SYGD LL
Sbjct: 285 ITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVDTIRAAYRHAIDARYRFFSYGDAMLL 344
Query: 357 FQK 359
++
Sbjct: 345 TRR 347
>gi|157828160|ref|YP_001494402.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
rickettsii str. 'Sheila Smith']
gi|165932858|ref|YP_001649647.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
rickettsii str. Iowa]
gi|166216749|sp|A8GR69|QUEA_RICRS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|189038875|sp|B0BWL5|QUEA_RICRO RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|157800641|gb|ABV75894.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
rickettsii str. 'Sheila Smith']
gi|165907945|gb|ABY72241.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
rickettsii str. Iowa]
Length = 365
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 147/387 (37%), Positives = 218/387 (56%), Gaps = 50/387 (12%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA P RD++ L++ ++ +L D +V
Sbjct: 1 MKLSDFDFDLPSELIAQYPSSERDNSDLLI------AVTPPIKTKFYNIIDYLKEGDLLV 54
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KVI AQLN K I+ L+ ++S +SWS +A+P++ + D +F
Sbjct: 55 FNNSKVIKAQLN---------LGKNITINLNQKLSDDSWSAFAKPARKLHVNDEFYF--- 102
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI-------- 172
+ + +K GEI + F ++ I + ++ G +PLP YI R +
Sbjct: 103 ---DNHKVIITEKLAMGEIKVKFKLNDISVFEFLNKYGEMPLPVYIRRSHSLCHPVATTT 159
Query: 173 --------------------DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIG 212
D YQT Y++I+GSVAAPTAGLHFT ++L +L + G
Sbjct: 160 GSKTYLNNDWIPWSNHGMTNTQNDNDRYQTVYSQIEGSVAAPTAGLHFTKDILDKLKAEG 219
Query: 213 IKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTS 272
I+ F+TLHVGAGTF+PVK E+ +H MH+E I TA+ +N K G RI++VGTT+
Sbjct: 220 IQATFLTLHVGAGTFLPVKTENIHEHKMHTEYCSITPDTAEIINKAKQEGKRIIAVGTTT 279
Query: 273 LRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEE 332
LR LE+ + +GI+ S T+IFITPG++F+ D+L++NFH PKSTL ML+ AF G +E
Sbjct: 280 LRTLES-SCNNGIVKAGSFKTDIFITPGFKFQTADMLLTNFHFPKSTLFMLICAFAGFKE 338
Query: 333 TKKMYQHAISHAYRFYSYGDTSLLFQK 359
++Y++AI A RF+SYGD +LL +K
Sbjct: 339 MHELYKYAIKEAMRFFSYGDATLLCRK 365
>gi|325283310|ref|YP_004255851.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Deinococcus
proteolyticus MRP]
gi|324315119|gb|ADY26234.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Deinococcus
proteolyticus MRP]
Length = 358
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 140/354 (39%), Positives = 197/354 (55%), Gaps = 12/354 (3%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ F+LPP RIA PRDS+RLM V + H+ +LP L + D +VFN
Sbjct: 9 LAALHFELPPGRIAQTGAEPRDSSRLMRVPR----AGEVQHHIFRELPELLRAGDVLVFN 64
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
++VI A++ + + +I L N WS Y +P++ G+ L G
Sbjct: 65 QSRVIPARVMARKPKVGGQGGGQIEVMLLREEENNVWSAYLKPARR--AGNELWLGDPAG 122
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ A V+ G LL F +++ + +G +PLPPYI D YQT
Sbjct: 123 -VQHRAEVVGVQEDGARLLRFDH---DIKPHLDDIGRLPLPPYIEAG-EDDTVWCERYQT 177
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ GSVAAPTAGLHFT LL RL ++G++ + VTLHVGAGTF PV+ +H+MH+
Sbjct: 178 VYARENGSVAAPTAGLHFTPELLERLRALGVEQHAVTLHVGAGTFKPVQGA-VSEHVMHA 236
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I TA A+N ++ G R+V+VGTT++R LE++ G + G T IFITPG
Sbjct: 237 EQYHIPPATADAINRARAEGRRVVAVGTTTVRALESSVDGGGEVRAGKGDTRIFITPGQA 296
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ D+L++N HLP STL++LV+AF G+E + Y A+ H YRFYS GD LL
Sbjct: 297 VQVPDLLITNLHLPDSTLMLLVAAFAGVERIQTAYAEALRHDYRFYSLGDAMLL 350
>gi|229586455|ref|YP_002844956.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
africae ESF-5]
gi|259551480|sp|C3PMQ3|QUEA_RICAE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|228021505|gb|ACP53213.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
africae ESF-5]
Length = 365
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 145/387 (37%), Positives = 218/387 (56%), Gaps = 50/387 (12%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDFDLP IA P RD++ L++ ++ +L D +V
Sbjct: 1 MKLSDFDFDLPSELIAQYPSRERDNSDLLI------AVTPPIKTKFYNIIDYLKEGDLLV 54
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KVI A+LN + I+ L+ ++S +SWS +A+P++ + D +F
Sbjct: 55 FNNSKVIKAKLN---------LGENITINLNQKLSDDSWSAFAKPARKLHVNDEFYF--- 102
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI-------- 172
+ + +K GEI + F ++ I + ++ G +PLP YI R +
Sbjct: 103 ---DNHKVIITEKLAMGEIKVKFELNDISVFEFLNKYGEMPLPVYIRRSHSLCHPVATTT 159
Query: 173 --------------------DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIG 212
D YQT Y++I+GSVAAPTAGLHFT ++L +L + G
Sbjct: 160 GSKTYLNNDWIPWSNHGMTNTQNDNDRYQTVYSQIEGSVAAPTAGLHFTKDILDKLKAEG 219
Query: 213 IKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTS 272
I+ F+TLHVGAGTF+PVK E+ +H MH+E I TA+ +N K G RI++VGTT+
Sbjct: 220 IQATFLTLHVGAGTFLPVKTENIHEHKMHTEYCSITPDTAKIINKAKQEGKRIIAVGTTT 279
Query: 273 LRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEE 332
LR LE+ + +GI+ S T+IFITPG++F+ D+L++NFH PKSTL ML+ AF G +E
Sbjct: 280 LRTLES-SCNNGIVKAGSFKTDIFITPGFKFQTADMLLTNFHFPKSTLFMLICAFAGFKE 338
Query: 333 TKKMYQHAISHAYRFYSYGDTSLLFQK 359
++Y++AI A RF+SYGD +LL +K
Sbjct: 339 MHELYKYAIKEAMRFFSYGDATLLCRK 365
>gi|220903425|ref|YP_002478737.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfovibrio desulfuricans subsp. desulfuricans str.
ATCC 27774]
gi|219867724|gb|ACL48059.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfovibrio desulfuricans subsp. desulfuricans str.
ATCC 27774]
Length = 365
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 133/371 (35%), Positives = 190/371 (51%), Gaps = 31/371 (8%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+++ + FDLP ++A P R +RL+V+ N L + DLP L ++
Sbjct: 9 LLQSYRFDLPQEQVAQFPPEERGGSRLLVMPRN--GELTLRHENFCDLPDCLPEGALLIA 66
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--------------NSWSVYARPSK 107
NN++V+ A+L G R ++ L + R
Sbjct: 67 NNSRVLQARLLGTR-----STGGKVEFLLLTPLPLVIERARADKNGGLYAEAEGLVRSGG 121
Query: 108 VIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIA 167
I++G+ F + G TV++ G+ + S +G +L + G IPLPPYI
Sbjct: 122 SIREGESFGFGAGIG-----VTVLESGPFGQRRVRLSWTG-DLAAAFAATGHIPLPPYI- 174
Query: 168 RKRPIDARDYVDYQTTYAK--IQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAG 225
KRP D YQT Y++ GSVAAPTAGLHFT L RL + G + VTL+VG G
Sbjct: 175 -KRPDAEDDLSRYQTVYSRQDKTGSVAAPTAGLHFTPPLRERLAAKGFEWAEVTLYVGYG 233
Query: 226 TFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI 285
TF PV+ D H MH E + TA A+ + +++VGTTSLR LE G
Sbjct: 234 TFSPVRSSDIRSHRMHREYIEVPEATALAIARAREEKRPVIAVGTTSLRTLEGVAELCGR 293
Query: 286 INPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAY 345
+ P++G+T+IF+ PG FR D L++NFHLP+S+LLMLVSAF G + Y AI++ Y
Sbjct: 294 VQPYTGWTDIFLYPGRPFRVADGLVTNFHLPESSLLMLVSAFAGRKRVLDAYAEAIANNY 353
Query: 346 RFYSYGDTSLL 356
RF+SYGD L+
Sbjct: 354 RFFSYGDAMLI 364
>gi|269792529|ref|YP_003317433.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Thermanaerovibrio acidaminovorans DSM 6589]
gi|269100164|gb|ACZ19151.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Thermanaerovibrio acidaminovorans DSM 6589]
Length = 348
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 139/363 (38%), Positives = 201/363 (55%), Gaps = 29/363 (7%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+V +D+ LP IA PV PRDS+RLMV+ + + + DL FL D +V
Sbjct: 8 LVDSYDYHLPEESIAQSPVEPRDSSRLMVIRRSDGS---VCHRIFRDLVDFLRPGDLLVM 64
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFFS 119
N+T+V+ A+L G + + + L + + W+ RP + ++ G ++ F
Sbjct: 65 NDTRVMRARLLGRKESGGS-----VEVFLLSPLDESRSAWTGMVRPGRKVRPGTVVRFSE 119
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G A + ++ G L+ G +G +PLPPYI ++ D
Sbjct: 120 DPGH---LAVIQERLPDGLRLV--HFPGESGWEIARTLGEVPLPPYIENRQV----DGER 170
Query: 180 YQTTYAK--IQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT Y+ + SVA+PTAGLHFT LLS L S G+ FVTL+VG GTF PVK + D
Sbjct: 171 YQTVYSDPSKELSVASPTAGLHFTRELLSELESRGVGRTFVTLNVGLGTFRPVKAQRASD 230
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF---TN 294
H+MH E + A +A+ + VK+RG R+V+VGTT +R LE+ INP G T+
Sbjct: 231 HVMHLETCLVSADSARMIREVKARGNRVVAVGTTVVRTLESYA-----INPLEGEPFETD 285
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
+FI PG+RFR VD +++NFHLP+STLLMLV+AF G + Y+ A++ YRF+S+GD
Sbjct: 286 LFIRPGFRFRVVDAMITNFHLPRSTLLMLVAAFGGYDTVMGAYREAVARGYRFFSFGDAM 345
Query: 355 LLF 357
LL
Sbjct: 346 LLI 348
>gi|139439012|ref|ZP_01772472.1| Hypothetical protein COLAER_01478 [Collinsella aerofaciens ATCC
25986]
gi|133775723|gb|EBA39543.1| Hypothetical protein COLAER_01478 [Collinsella aerofaciens ATCC
25986]
Length = 403
Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats.
Identities = 127/410 (30%), Positives = 187/410 (45%), Gaps = 62/410 (15%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSC-------PLVISDHLVSDLPAFL 53
M +FD++LP IA P PRDS RL+VV S + + D+ ++
Sbjct: 1 MRTDDFDYNLPEELIAQAPAEPRDSCRLLVVDRKGSQAGTPLEHGGTVEHRIFRDIIDYI 60
Query: 54 NSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP-----NSWSVYARPSKV 108
D +V N T+V+ A+L G + + L R + W +P K
Sbjct: 61 EPGDVLVINQTRVMPARLIGRK----TGSGGVVETLLLKRREDVDPLGHVWECLVKPGKR 116
Query: 109 IKKGDILHFFSQDGQSR------LEATVIDKWNT--GEILLVFSISG-------IELERQ 153
+K G + + + + L A V+D G L+ F +G L+
Sbjct: 117 LKPGAQIEYRAGGAHAPEGAPVVLTAEVVDFVTDSRGGRLVRFEPAGCNAAGDPRTLDEA 176
Query: 154 ISLVGTIPLPPYIARKRPIDARDYVDYQTTYA-KIQGSVAAPTAGLHFTSNLLSRLISIG 212
I G +PLPPYI D YQT YA K + S AAPTAGLHFT L++ + + G
Sbjct: 177 IHAAGHVPLPPYITDYEG----DPEKYQTVYAMKEEHSAAAPTAGLHFTPELMAAIEAKG 232
Query: 213 IKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTS 272
K V L VG TF V+ +D H+MH+E + A++ K+ G R+++VGTT+
Sbjct: 233 AKFAAVELEVGIDTFRLVEEDDPTQHVMHTERYHVSQEVVDAVHKAKAEGHRVIAVGTTA 292
Query: 273 LRLLETA------------------TTEDGIINPWSGF--------TNIFITPGYRFRAV 306
+R LE+A EDG G T +++ PG + V
Sbjct: 293 VRSLESAFDTDAPVSDPAVTARYFEGREDGADTLGRGDIVVRESATTQLYLMPGSTYHVV 352
Query: 307 DILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
D L++NFH+P+STL+MLVSA ++ Y AI YRF+S+GD L+
Sbjct: 353 DALITNFHVPRSTLMMLVSALATRDQIMDAYAAAIEERYRFFSFGDAMLI 402
>gi|83720404|ref|YP_441826.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia thailandensis E264]
gi|83654229|gb|ABC38292.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia thailandensis E264]
Length = 374
Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats.
Identities = 138/363 (38%), Positives = 194/363 (53%), Gaps = 21/363 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FDFDLPP IA + R ++RL+ V N S P + D ++LPA + D +V
Sbjct: 19 LTLSDFDFDLPPELIAQTALPERSASRLLEVD-NASAPPRLVDRRFAELPACVAPGDLLV 77
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKV+ A+ G + +I + + R SK G L
Sbjct: 78 FNDTKVLKARFFGRKAS-----GGKIEVLIERVTGQRTALAQIRASKSPAPGTTLTLADA 132
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ TV ++ L + I G +PLPPYI DA D Y
Sbjct: 133 -----FDVTVGERVEPFFTLHFPD----DCLVLIERHGRLPLPPYIEH--TPDATDEARY 181
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H M
Sbjct: 182 QTVFAANPGAVAAPTAGLHFDDAVLAALDARGVERATLTLHVGAGTFQPVRVENIAEHRM 241
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSL----RLLETATTEDGIINPWSGFTNIF 296
H E + + + + ++RGGR+++VGTTS+ A + T+IF
Sbjct: 242 HRESYELTDALVEKIAATRARGGRVIAVGTTSMRALEAAARDADAAGRPLAATRAETDIF 301
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ITPGYRFR VD L++NFHLPKSTLLMLVSAF G++ + Y+HAI YRF+SYGD LL
Sbjct: 302 ITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVDTIRAAYRHAIDARYRFFSYGDAMLL 361
Query: 357 FQK 359
++
Sbjct: 362 TRR 364
>gi|288799662|ref|ZP_06405121.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
sp. oral taxon 299 str. F0039]
gi|288332910|gb|EFC71389.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
sp. oral taxon 299 str. F0039]
Length = 388
Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats.
Identities = 117/394 (29%), Positives = 186/394 (47%), Gaps = 43/394 (10%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVHPNLSCPLVIS 42
M + +F F LP ++AL P + +D +RLMV+H +
Sbjct: 1 MKLSQFKFKLPAEQVALYPHCFEREYTDKDGKKETFKITRQDESRLMVLHKKSGTIDLFQ 60
Query: 43 DHL-----------VSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLH 91
++ + + D +FN+TKV A+L G + + + +I L
Sbjct: 61 KDENGNPIEGKYIEFRNIVEYFDEGDTFIFNDTKVFPARLYGTK----EKTDAKIEVFLL 116
Query: 92 MRVSP--NSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGI- 148
++ W V P++ I+ G+ L F D + A VID + L F
Sbjct: 117 RELNQEMRLWDVLVEPARKIRIGNKLFF---DESGSMVAEVIDNTTSRGRTLRFLYDCPH 173
Query: 149 -ELERQISLVGTIPLPPYIARKRP---IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNL 204
E ++++ +G PLP YI R D ++Q +AK +G+V AP GLHF+ L
Sbjct: 174 EEFKKELYALGESPLPRYIIDNREETHATQEDLENFQCIFAKNEGAVTAPATGLHFSREL 233
Query: 205 LSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGR 264
L R+ GI ++TLH G G F ++VED H M SE ++A + +N K G +
Sbjct: 234 LKRMEIKGINNAYITLHCGLGCFNDIEVEDLTKHKMDSEQMVVNAEACKIVNDTKRNGKK 293
Query: 265 IVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLV 324
+ +VGT+ ++ ETA DG++ + G+TN FI P Y F + +++NF+ P STLLM
Sbjct: 294 VCAVGTSVVKATETAVGTDGMLKEFEGWTNKFIFPPYDFGLSNTMVTNFYHPYSTLLMET 353
Query: 325 SAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+AF G E + Y A+ H Y F +GD+ L+
Sbjct: 354 AAFGGYELVMEAYDLAVKHGYMFGCFGDSLLILN 387
>gi|260909536|ref|ZP_05916239.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
sp. oral taxon 472 str. F0295]
gi|260636384|gb|EEX54371.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
sp. oral taxon 472 str. F0295]
Length = 388
Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats.
Identities = 123/394 (31%), Positives = 185/394 (46%), Gaps = 43/394 (10%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVHPNLSCPLVI- 41
M + +F+F LP IAL P + RD RLMV+H + +
Sbjct: 1 MKLSQFNFKLPQELIALYPHSVYHEIENEKGEKEMSRLTRRDECRLMVLHKKSNTIDLFK 60
Query: 42 ----------SDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLH 91
D+ + + D +FN+TKV A+L G++ + + +I L
Sbjct: 61 KDKKGKPIKGEFIQFRDIIDYFDEGDTFIFNDTKVFPARLYGMK----EKTDAKIEVFLL 116
Query: 92 MRVSP--NSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLV--FSISG 147
++ W V P++ I+ G+ L F D + A VID + L +
Sbjct: 117 RELNQEMRLWDVLVEPARKIRIGNKLFF---DDSGTMVAEVIDNTTSRGRTLRFLYDCDH 173
Query: 148 IELERQISLVGTIPLPPYIARKRPI---DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNL 204
E +R + +G PLP YI R D D+QT YA +G+V AP GLHF+ L
Sbjct: 174 DEFKRSLFALGESPLPRYIIDARENHHGTEEDMEDFQTIYAANEGAVTAPATGLHFSREL 233
Query: 205 LSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGR 264
L R+ GI +TLH G G F ++VED H + SE I + +N KS G
Sbjct: 234 LKRMEIRGINSAAITLHCGLGNFHDIEVEDLTKHKVDSESMHIGSEACAIVNKAKSEGKH 293
Query: 265 IVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLV 324
I +VGT+ ++ ETA DG++ +SG+TN FI P Y F D +++NF+ P STLLM
Sbjct: 294 ICAVGTSVVKATETAVGTDGMLKEYSGWTNRFIFPPYDFGLADTMVANFYHPLSTLLMST 353
Query: 325 SAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+AF G + + Y+ A+ + Y+F +GD L+
Sbjct: 354 AAFGGYDLVMEAYRLAVENEYKFGCFGDALLILN 387
>gi|294338718|emb|CAZ87050.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein queA) [Thiomonas sp. 3As]
Length = 391
Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats.
Identities = 144/388 (37%), Positives = 196/388 (50%), Gaps = 39/388 (10%)
Query: 4 KEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNN 63
+FDF LPP IA P R +RL+ + P + D DLP L + D +VFN+
Sbjct: 8 DDFDFHLPPELIAQHPPARRSDSRLL----DAGNPPALIDRGFRDLPGLLRAGDLVVFND 63
Query: 64 TKVITAQLNGVRFCHINRREKE--ISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
T+VI A+L G + + + + N + R SK K G +L +
Sbjct: 64 TRVIPARLWGFKAAGEAGAALGGAVEVLVERVRADNRVWAHVRASKSPKPGQVLWLGAAR 123
Query: 122 GQSR-----------LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKR 170
+ T + + L L + G +PLPPYI
Sbjct: 124 PDAAAGDEPHASAPLFAVTTVGRAGPDGGLFELEFPAEPL-ALLQQYGAVPLPPYITHAP 182
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
D D YQT YA+ GSVAAPTAGLHF +L+++ ++G + VTLHVGAGTF PV
Sbjct: 183 GGD--DVQRYQTVYAQHPGSVAAPTAGLHFDEAILAKIDAMGAQRAAVTLHVGAGTFQPV 240
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVK------------SRGGRIVSVGTTSLRLLET 278
+V D H MHSE + TAQA+ V+ R+V+VGTT++R LE+
Sbjct: 241 RVNDLRQHQMHSEWYTVPEATAQAIAKVRMRQAQARAAGQMHAAPRVVAVGTTAMRALES 300
Query: 279 ATT-------EDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIE 331
A DG + P + T +F+TPGYRFR VD L++NFHLPKSTLLMLVSAF G++
Sbjct: 301 AALAAEAAGAPDGAVLPGARDTALFVTPGYRFRVVDALLTNFHLPKSTLLMLVSAFAGMD 360
Query: 332 ETKKMYQHAISHAYRFYSYGDTSLLFQK 359
+ Y HAI+ YRF+SYGD L ++
Sbjct: 361 TIRAAYAHAIAQRYRFFSYGDAMWLTRQ 388
>gi|315187237|gb|EFU20994.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Spirochaeta thermophila DSM 6578]
Length = 337
Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats.
Identities = 136/357 (38%), Positives = 187/357 (52%), Gaps = 20/357 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +K+F FDLP IA P R+ ARLMVVH I V +LP L +V
Sbjct: 1 MKLKDFYFDLPEDLIAQHPSQRREDARLMVVHRETG---RIEHSYVRELPLILPP-SCLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+V +++ R ++ L V P+ W ++ + G +
Sbjct: 57 FNDTRVRKSRILATR----RDSGGKVEILLLEEVEPSLWKALVSRTRRQRAGVVYDLPGG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
EA ++ G L+ S E + G +PLPPYI KR D Y
Sbjct: 113 R-----EAEIVGM-EDGLRLVRISPPID--EAYLDRHGHVPLPPYI--KRADLPEDEERY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ GS AAPTAGLHFT L+ L S V F+TLHVG GTF PV+ E+ ++H M
Sbjct: 163 QTVFARHPGSAAAPTAGLHFTPALMDELKSRHT-VTFLTLHVGLGTFQPVRTENVEEHRM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E I TA+ + S KSR + +VGTTS R LE+A E G + T+++I PG
Sbjct: 222 HTERFHISEETARVIESAKSRHIPVCAVGTTSTRALESAW-EHGRLKRGWQETSLYIYPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+ +D L +NFH P S+L++LVSAF G + + Y+ AI H YRF+SYGD L+
Sbjct: 281 YTFKVIDHLFTNFHTPGSSLILLVSAFLGKDLLLEAYRKAIEHRYRFFSYGDAMLII 337
>gi|320334668|ref|YP_004171379.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase [Deinococcus
maricopensis DSM 21211]
gi|319755957|gb|ADV67714.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase [Deinococcus
maricopensis DSM 21211]
Length = 354
Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats.
Identities = 147/356 (41%), Positives = 202/356 (56%), Gaps = 23/356 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDLPP RIA PRD++RLMVV I + DLP L + D +VFN
Sbjct: 20 LARLNFDLPPERIAQTGAEPRDTSRLMVV-----GESGIDHRIFRDLPDLLRTGDLLVFN 74
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
++VI A++ + + L N WS Y + +K G L F S
Sbjct: 75 ESRVIPARIIARKP-----TGGAVETLLLREEEANVWSAYLKGAKR--AGRDLLFGS--- 124
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ A VI G LL FS +++ + +G +PLPPYI DA YQT
Sbjct: 125 ---VHAEVIGTLEDGARLLRFS---EDIKPHLDALGRLPLPPYIDAG-EDDAVWQDRYQT 177
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA+ GSVAAPTAGLHFT LL+RL ++G+ FVTLHVGAGTF P+ +H MH+
Sbjct: 178 VYARTAGSVAAPTAGLHFTPELLARLQAMGVGTAFVTLHVGAGTFKPISG-SVAEHTMHA 236
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E + + TA A+N+ + G R+++VGTT++R LE+A +G ++P G T IFITPG+
Sbjct: 237 ERYTVTSDTADAINAARREGRRVIAVGTTTVRALESAADVNGTVHPGDGDTRIFITPGHA 296
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+R D+L++N HLP STLL+LV+AF G + + YQ A+ H YRFYS GD LL +
Sbjct: 297 WRVPDLLITNLHLPNSTLLLLVAAFAGEDRIRAAYQAALDHPYRFYSLGDAMLLQR 352
>gi|320537237|ref|ZP_08037199.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Treponema
phagedenis F0421]
gi|320145912|gb|EFW37566.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Treponema
phagedenis F0421]
Length = 348
Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats.
Identities = 133/358 (37%), Positives = 184/358 (51%), Gaps = 13/358 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M K+FDF LP IA +P R +L+++ SD S+LP L N +V
Sbjct: 1 MNTKDFDFYLPEHLIAQKPSGKRGEDKLLLLDKKTGA---FSDRQFSELPDILPPNALMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS-WSVYARPSKVIKKGDILHFFS 119
FNN+KV A++ + L + W + +K + G F
Sbjct: 58 FNNSKVRRARVYAK----SKDSGAQTEFLLIDSLDDGRLWQAMTKKAKRQRIGKT--FLF 111
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+G + +T + + + G IPLPPYI R+ D
Sbjct: 112 DEGVEAMVVEPPANTDTSAEFRWLQFNTPITDSWLETHGHIPLPPYIRRE--DTEEDASR 169
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YA+ GS+AAPTAGLHFT +L R+ + GI+ +TLHVG GTF+PV+ E ++H
Sbjct: 170 YQTVYAQTTGSIAAPTAGLHFTDEILQRIDARGIERTAITLHVGLGTFLPVRTEKIEEHR 229
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFIT 298
MH+E FI TA A+ K G I++VGTTS+R LE+A D + S TNIFI
Sbjct: 230 MHTEKFFITDTTATAIEKAKREGRPIIAVGTTSVRSLESAWNPDTQRLMRGSQSTNIFIY 289
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
P Y+F+ VD+L +NFH P+STLLMLVSA G ++ Y HA+ YRF+SYGD +
Sbjct: 290 PPYQFKLVDMLFTNFHTPESTLLMLVSALAGKDQILAAYAHAVEQEYRFFSYGDAMFI 347
>gi|269216137|ref|ZP_06159991.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Slackia
exigua ATCC 700122]
gi|269130396|gb|EEZ61474.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Slackia
exigua ATCC 700122]
Length = 359
Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats.
Identities = 135/368 (36%), Positives = 188/368 (51%), Gaps = 24/368 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+DLP IA P RD+ RL+V+ ++D + D+ +LN D +V
Sbjct: 1 MRTDDFDYDLPERCIAQEPAPVRDACRLLVMDRETGA---LADRIFRDIEGYLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--------NSWSVYARPSKVIKKG 112
N+T+V+ A+L G + E L W V RP K +K G
Sbjct: 58 ANSTRVMPARLLGHKRT----TGGEAEVFLLRERFDVEPKADASAVWDVLVRPGKRLKPG 113
Query: 113 DILHFFSQDGQSRLEATVID---KWNTGEILLVFSISGIELERQISLVGTIPLPPYIARK 169
I+ F +G L A +ID + GE + S L+ + VG PLPPYI
Sbjct: 114 AIVDFVDGEGAVALSAEIIDWGLEGGKGERIARLSTERPSLDEALHAVGRTPLPPYIKHY 173
Query: 170 RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
A D YQT Y+ + S AAPTAGLHFT L+ RL + G+ V L VG TF
Sbjct: 174 ----AGDEEMYQTVYSHDEKSAAAPTAGLHFTPELIERLRAKGVAWKTVELEVGLDTFRI 229
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINP 288
V +D H MH+E + A ++ +RGGR+ +VGTTS+R LE+A E G ++
Sbjct: 230 VDEDDPTQHTMHTEHYTVSQEVVDACDACHARGGRVFAVGTTSVRSLESAFDRETGRLHA 289
Query: 289 WSGF-TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
T+++I PG+ F VD L++NFH+P+STL+MLVSAF E + Y+HAI YR
Sbjct: 290 RDHEATSLYILPGFEFGVVDGLITNFHVPRSTLMMLVSAFSTCENVRAAYRHAIESGYRM 349
Query: 348 YSYGDTSL 355
S+GD L
Sbjct: 350 LSFGDAML 357
>gi|282880083|ref|ZP_06288803.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella timonensis CRIS 5C-B1]
gi|281305956|gb|EFA97996.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella timonensis CRIS 5C-B1]
Length = 388
Score = 389 bits (1001), Expect = e-106, Method: Composition-based stats.
Identities = 121/394 (30%), Positives = 185/394 (46%), Gaps = 43/394 (10%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVHPNLSCPLVIS 42
M + +F F+LP IAL P + RD +RLMV+H +
Sbjct: 1 MKLSQFKFNLPEELIALYPHSVYHEIKNAHGKKEISRMTRRDESRLMVLHRKSQTIDMFQ 60
Query: 43 DHL-----------VSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLH 91
+ + + D +FN+TKV A+L G + + + +I L
Sbjct: 61 KDKKGKDIKGQYLEFRHVLDYFDEGDTFIFNDTKVFPARLYGTK----EKTDAKIEVFLL 116
Query: 92 MRVSP--NSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGI- 148
++ W V P++ I+ G+ L F D + A VID + L F
Sbjct: 117 RELNQEMRLWDVLVEPARKIRIGNKLFF---DESGTMVAEVIDNTTSRGRTLRFLYDCPH 173
Query: 149 -ELERQISLVGTIPLPPYIARKRP---IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNL 204
E + ++ +G PLP YI +R DA D DYQT +AK +G+V AP+ GLHF+ +
Sbjct: 174 DEFKHELFALGETPLPRYIINRREVPHADAHDQEDYQTIFAKHEGAVRAPSTGLHFSREM 233
Query: 205 LSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGR 264
L R+ GI ++TLH F ++VED H M SE IDA + +N K G
Sbjct: 234 LKRMEIKGIHDTYITLHCSLSAFNSIEVEDLTKHKMDSEQMKIDAKVCEIVNRTKQEGHH 293
Query: 265 IVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLV 324
+ +VGT+ ++ ETA DG++ + G+T+ FI P Y F D +++NF+ S LLM
Sbjct: 294 VCAVGTSVVKATETAVGTDGLLKEYDGWTSKFIFPPYDFGLADTMIANFYHSMSPLLMET 353
Query: 325 SAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+AF G E + Y A+ + Y+F YGD+ L+
Sbjct: 354 AAFGGYELVMEAYDLAVKNGYKFGCYGDSMLILN 387
>gi|226356464|ref|YP_002786204.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Deinococcus
deserti VCD115]
gi|226318454|gb|ACO46450.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
(Queuosine biosynthesis protein queA) [Deinococcus
deserti VCD115]
Length = 353
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 140/363 (38%), Positives = 194/363 (53%), Gaps = 25/363 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDLP +RIA PRDS+RLMVV ++ + +LP L D +VFN
Sbjct: 10 LARLNFDLPDNRIAQTGAEPRDSSRLMVV------GETLAHRVFHELPELLQPGDLLVFN 63
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMR-----VSPNSWSVYARPSKVIKKGDILHF 117
++VI A++ + ++ L + P+ WS Y +P++ G+ L
Sbjct: 64 ESRVIPARVMARKPLVNGLGGGQVEVLLLREEETLDLGPHVWSAYLKPARR--AGNELWL 121
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
A V+ + G LL F G +++ + +G +PLPPYI D
Sbjct: 122 GEH------RAEVVGQLEDGARLLRF---GYDIKPHLDEIGRLPLPPYIDAG-SSDEVWR 171
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YA+ GSVAAPTAGLHFT LLSRL + G++ VTLHVGAGTF P+ D
Sbjct: 172 ERYQTVYAREPGSVAAPTAGLHFTPELLSRLDARGVERVSVTLHVGAGTFKPI-TGSVAD 230
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H+MH+E + A A+N + G R+V+VGTT++R LE+A + + G T IFI
Sbjct: 231 HVMHAERYMVSDQAADAINRARREGRRVVAVGTTTVRTLESAWDGN-AVRAGEGETRIFI 289
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPG D+L++N HLP STLL+LV+AF G E + Y A+S YRFYS GD LL
Sbjct: 290 TPGRPVNVPDLLITNLHLPGSTLLLLVAAFAGEERIRAAYDAALSEGYRFYSLGDAMLLE 349
Query: 358 QKR 360
R
Sbjct: 350 NLR 352
>gi|33862496|ref|NP_894056.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prochlorococcus marinus str. MIT 9313]
gi|46576943|sp|Q7V8V2|QUEA_PROMM RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|33640609|emb|CAE20398.1| Queuosine biosynthesis protein [Prochlorococcus marinus str. MIT
9313]
Length = 371
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 134/362 (37%), Positives = 188/362 (51%), Gaps = 12/362 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D+ L P RIA PV PR SARL++V P P + V D L + D +V
Sbjct: 9 LLSSYDYPLDPERIAQLPVEPRHSARLLIVQPLGMKPPIARHAEVWDWQEELRAGDLLVI 68
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L R + W RP+K ++ GD L +
Sbjct: 69 NDTRVLKARLRVRR-----SGGGLAELLVLEPRGEGCWLCLGRPAKRLRPGDQLWLEALG 123
Query: 122 GQSRLEATVIDKWNTGEILLVFSIS---GIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ + +G ++ F +LE + G +PLPPYI R D D
Sbjct: 124 EEPIALQVISKDSASGGRVVQFPSHYANAEQLELLLERYGEVPLPPYIQRH---DPSDSE 180
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YA G+VAAPTAGLH + LL L G+ + VTLHVG GTF PV+ ED
Sbjct: 181 RYQTRYASRPGAVAAPTAGLHLSDELLEALKQRGVMLTSVTLHVGLGTFRPVETEDLSHL 240
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFI 297
+HSE + +A+ + ++R GR+++VGTTS+R LE A G + + G ++ I
Sbjct: 241 QLHSEWVEVRDDVVEAVMACRARAGRVIAVGTTSVRALEGAALAGGGFLQSFCGPVDLVI 300
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGYRF VD L++NFHLPKS+LL+LVSA G E +Y AI H YRF+SYGD +
Sbjct: 301 QPGYRFAVVDGLLTNFHLPKSSLLLLVSAMVGRERLLALYAEAIEHQYRFFSYGDAMWID 360
Query: 358 QK 359
+
Sbjct: 361 PE 362
>gi|313887406|ref|ZP_07821096.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas asaccharolytica PR426713P-I]
gi|312923174|gb|EFR33993.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas asaccharolytica PR426713P-I]
gi|332177882|gb|AEE13572.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Porphyromonas asaccharolytica DSM 20707]
Length = 357
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 112/360 (31%), Positives = 173/360 (48%), Gaps = 13/360 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ FD+ LP IA P RD +R+MV+H I D+ + D VF
Sbjct: 6 KLSHFDYKLPEELIAQYPTTFRDQSRMMVLHRTDGS---IEHKNFVDIIDYFGEKDTFVF 62
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFFS 119
N+TKV A+L G++ + + +I L ++ W V P++ I+ G+ L F
Sbjct: 63 NDTKVFPARLYGLK----EKNQAKIEVFLLRELNESLRLWDVLVDPARKIRIGNKLEFGE 118
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARDY 177
+ G L A VID + +L F G + + + +G PLP I KRP + D
Sbjct: 119 EGGAPVLVAEVIDNTISRGRILRFLYDGSHEDFLKDLYSLGEAPLPEEI--KRPAEPSDL 176
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQ+ +AK G+V AP A LHF+ +L +L G + F+TLH ++ ++VE
Sbjct: 177 ERYQSVFAKHIGAVCAPAASLHFSDIILHKLRLQGCNLAFLTLHHNLSSYQEIEVEAISK 236
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
+ + +E +I A +N + +IV+VG T +R LET + DG + +SG+TN FI
Sbjct: 237 YKVENEEMYISAECCDIVNQARDDKAQIVAVGATVMRALETGVSTDGYLKEFSGWTNEFI 296
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
P Y +++NF+ PKS LM + G + A+ YRF YGD L+
Sbjct: 297 YPPYHIHLPTAMLTNFNAPKSINLMCAATMGGEKNVMNAMNVAVKEKYRFGCYGDALLIM 356
>gi|94985052|ref|YP_604416.1| queuosine biosynthesis protein [Deinococcus geothermalis DSM 11300]
gi|94555333|gb|ABF45247.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Deinococcus geothermalis DSM 11300]
Length = 366
Score = 389 bits (999), Expect = e-106, Method: Composition-based stats.
Identities = 143/352 (40%), Positives = 193/352 (54%), Gaps = 19/352 (5%)
Query: 8 FDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVI 67
FDLPP RIA PRD++RLMVV I+ + +LP L + D +VFN ++VI
Sbjct: 27 FDLPPERIAQTGAEPRDASRLMVVGRE-----HIAHRIFRELPELLRAGDVLVFNESRVI 81
Query: 68 TAQLNGVRF-CHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRL 126
A++ + +I L N WS Y +P+K G L +
Sbjct: 82 PARVLARKPVTEGGFGGGQIEVLLLREEEQNVWSAYLKPAKR--AGKELWL------GQH 133
Query: 127 EATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAK 186
A V G LL F +++ + +G +PLPPYI D R YQT YA+
Sbjct: 134 RAEVTGVLPDGARLLRFDH---DIKPHLDEIGRLPLPPYIQAGD-SDERWRERYQTVYAR 189
Query: 187 IQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGF 246
GSVAAPTAGLHFT LL+RL ++G++ + +TLHVGAGTF P+ DH+MH+E
Sbjct: 190 EPGSVAAPTAGLHFTPELLARLDALGVERHALTLHVGAGTFRPI-TGSVADHVMHAERYA 248
Query: 247 IDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAV 306
I A A+N K G R+++VGTT++R LE++ DG +NP G T IFI PG R
Sbjct: 249 ISETVAAAINRAKVEGRRVIAVGTTTVRALESSANADGTVNPGEGETRIFILPGVPVRVP 308
Query: 307 DILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
D+L++N HLP STLL+LV+AF G E + Y A+ YRFYS GD LL +
Sbjct: 309 DLLITNLHLPGSTLLLLVAAFAGEERIRAAYDAALVGDYRFYSLGDAMLLER 360
>gi|296134757|ref|YP_003641999.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Thiomonas
intermedia K12]
gi|295794879|gb|ADG29669.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Thiomonas
intermedia K12]
Length = 406
Score = 388 bits (998), Expect = e-106, Method: Composition-based stats.
Identities = 147/388 (37%), Positives = 198/388 (51%), Gaps = 39/388 (10%)
Query: 4 KEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNN 63
+FDF LPP IA P R +RL+ + P + D DLP L ++D +VFN+
Sbjct: 23 DDFDFHLPPELIAQHPPARRSDSRLL----DAGSPPTLIDRGFRDLPGLLRADDLVVFND 78
Query: 64 TKVITAQLNGVRFCHINRREKE--ISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
T+VI A+L G + + + + N + R SK K G +L +
Sbjct: 79 TRVIPARLWGFKAAGEAGAALGGAVEVLVERVRADNRVWAHVRASKSPKPGQVLWLGAAR 138
Query: 122 ----------GQSRLEA-TVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKR 170
G + L A T + + L L + G +PLPPYI
Sbjct: 139 PDAAAGDEPHGSAPLFAVTTVGRAGPDGGLFELEFPAEPL-ALLQQYGAVPLPPYITHAP 197
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
D D YQT YA+ GSVAAPTAGLHF +L + +IG + VTLHVGAGTF PV
Sbjct: 198 GSD--DVQRYQTVYAQHPGSVAAPTAGLHFDEAILEAIDAIGAQRAAVTLHVGAGTFQPV 255
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVK------------SRGGRIVSVGTTSLRLLET 278
+V D H MHSE + T+QA+ V+ R+V+VGTT++R LE+
Sbjct: 256 RVNDLRQHQMHSEWYTVPEATSQAIAKVRMRQAQARAAGQLHAAPRVVAVGTTAMRALES 315
Query: 279 ATT-------EDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIE 331
A DG + P + T +F+TPGYRFR VD L++NFHLPKSTLLMLVSAF G++
Sbjct: 316 AALAAEAAGAPDGTVIPGARDTALFVTPGYRFRVVDALLTNFHLPKSTLLMLVSAFAGMD 375
Query: 332 ETKKMYQHAISHAYRFYSYGDTSLLFQK 359
+ Y HAI+ YRF+SYGD L ++
Sbjct: 376 TIRAAYAHAIAQRYRFFSYGDAMWLTRQ 403
>gi|282858550|ref|ZP_06267721.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella bivia JCVIHMP010]
gi|282588675|gb|EFB93809.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella bivia JCVIHMP010]
Length = 394
Score = 388 bits (997), Expect = e-106, Method: Composition-based stats.
Identities = 118/400 (29%), Positives = 190/400 (47%), Gaps = 49/400 (12%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVHPNLSC----P 38
M + +F F+LP ++AL P V RD RLMVVH
Sbjct: 1 MKLSQFKFNLPEEQVALYPHSSERVLKRADGSEQKFTVVRRDEGRLMVVHRKSGKIDMFK 60
Query: 39 LVISDH-------LVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLH 91
I+D D+ + D +FN+TKV A+L G + + + +I L
Sbjct: 61 GDITDKPKEEDYIRFRDVLDYFGEGDTFIFNDTKVFPARLYGTK----EKTDAKIEVFLL 116
Query: 92 MRVSP--NSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLV--FSISG 147
++ W V P++ I+ G+ L F D + A VID + L +
Sbjct: 117 RELNAEMRLWDVLVEPARKIRIGNKLFF---DESGTMVAEVIDNTTSRGRTLRFLYDCDH 173
Query: 148 IELERQISLVGTIPLPPYIARKRPIDA---------RDYVDYQTTYAKIQGSVAAPTAGL 198
E +R++ +G PLP YI RP + D ++Q+ +AK +G+V+AP +
Sbjct: 174 EEFKRELFALGEAPLPRYIIDNRPKEEGEEFAHATADDLENFQSVFAKNEGAVSAPGTNI 233
Query: 199 HFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSV 258
HF+ +++ + G+K FVTLH G G+F ++VED H M SE I+A + +N
Sbjct: 234 HFSEHMMKMMEIKGLKSAFVTLHCGLGSFHDIEVEDLTKHKMDSEEMHINAEACEIVNKT 293
Query: 259 KSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKS 318
K G ++ +VG + ++ E++ DG++ + G+TN FI P Y F D ++ NF+ P S
Sbjct: 294 KLGGHKLCAVGASVVKACESSVGTDGLLKEYDGWTNKFIFPPYNFGLADSMLVNFYHPYS 353
Query: 319 TLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
LLM +AF G + + Y A+ + Y F S+GD+ L+
Sbjct: 354 VLLMETAAFGGYDLIMEAYDLAVKNGYMFGSFGDSMLILN 393
>gi|228470898|ref|ZP_04055743.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas uenonis 60-3]
gi|228307295|gb|EEK16309.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas uenonis 60-3]
Length = 357
Score = 388 bits (996), Expect = e-106, Method: Composition-based stats.
Identities = 111/360 (30%), Positives = 172/360 (47%), Gaps = 13/360 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ FD+ LP IA P RD +R+MV+H I D+ + D VF
Sbjct: 6 KLSHFDYKLPEELIAQYPTTFRDQSRMMVLHRTDGS---IEHKNFVDILDYFGEKDTFVF 62
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFFS 119
N+TKV A+L G++ + + +I L ++ W V P++ I+ G+ L F
Sbjct: 63 NDTKVFPARLYGLK----EKNQAKIEVFLLRELNESLRLWDVLVDPARKIRIGNKLEFGE 118
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARDY 177
+ G L A VID + +L F G + + + +G PLP I KRP + D
Sbjct: 119 EGGAPVLVAEVIDNTISRGRILRFLYDGSHEDFLKDLYSLGEAPLPQEI--KRPAEPSDL 176
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQ+ +AK G+V AP A LHF+ +L +L G + F+TLH ++ ++VE
Sbjct: 177 ERYQSVFAKHIGAVCAPAASLHFSDIILHKLRLQGCNLAFLTLHHNLSSYQEIEVEAISK 236
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
+ + +E +I +N + +IV+VG T +R LET + DG + +SG+TN FI
Sbjct: 237 YKVENEEMYIPLECCDIVNQARDDNAQIVAVGATVMRALETGVSTDGYLKEFSGWTNEFI 296
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
P Y +++NF+ PKS LM + G + A+ YRF YGD L+
Sbjct: 297 YPPYHIHLPTAMLTNFNAPKSINLMCAATMGGEKNVMNAMNVAVKEKYRFGCYGDALLIM 356
>gi|258404231|ref|YP_003196973.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Desulfohalobium retbaense DSM 5692]
gi|257796458|gb|ACV67395.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Desulfohalobium retbaense DSM 5692]
Length = 363
Score = 388 bits (996), Expect = e-106, Method: Composition-based stats.
Identities = 126/364 (34%), Positives = 193/364 (53%), Gaps = 21/364 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ + F+LP +IA P RD++RL+++ + DL L +V N
Sbjct: 10 LDAYQFELPADQIAQHPHPQRDASRLLILDRSSGQR---QHATFRDLVDTLPDGALLVAN 66
Query: 63 NTKVITAQLNGVRFCHINRRE----KEISCTLHMRVSPNSWSVYA----RPSKVIKKGDI 114
++V+ A+L G + + E + ++ + R SK + G
Sbjct: 67 TSRVLPARLKGQKRATGGKVEFLLLTPLPLVTPQPLADGRNEGFVSGLLRSSKPLAVGQK 126
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
F +E TVI++ G + + SG ++ G +PLPPYI +R DA
Sbjct: 127 ADF-----PGGIELTVIEREEFGRVQVRLCWSG-DMAEVFQAYGHMPLPPYI--QREDDA 178
Query: 175 RDYVDYQTTYAK--IQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D+ YQT YA GSVAAPTAGLHFT ++L L GI+ VTL+VG GTF P++
Sbjct: 179 TDHGRYQTVYADSAKTGSVAAPTAGLHFTDDVLHALRDKGIQWAEVTLYVGYGTFSPLRC 238
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
D +H MH E +DA A+ ++ ++ G +V+VGTT++R LE+ G I P++G+
Sbjct: 239 RDIREHHMHPEYIELDAANAETISRAQAEGRPVVAVGTTTVRTLESIAHHCGRIQPFAGW 298
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T+IFI PG+ FR VD L++NFHLP S+L+++V+AF G + Y+ A+ YRF+SYGD
Sbjct: 299 TDIFIYPGFSFRVVDHLLTNFHLPGSSLILMVAAFAGRRLVLEAYEEAVDEGYRFFSYGD 358
Query: 353 TSLL 356
+
Sbjct: 359 AMFI 362
>gi|15806585|ref|NP_295300.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Deinococcus
radiodurans R1]
gi|21263929|sp|Q9RU19|QUEA_DEIRA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|6459340|gb|AAF11138.1|AE002001_4 s-adenosylmethionine:tRNA ribosyltransferase-isomerase [Deinococcus
radiodurans R1]
Length = 362
Score = 388 bits (996), Expect = e-105, Method: Composition-based stats.
Identities = 141/359 (39%), Positives = 192/359 (53%), Gaps = 18/359 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ FDLP RIA PRD++RLMVV I + DLP L +D +VFN
Sbjct: 15 LARLHFDLPEDRIAQTGAEPRDTSRLMVV------GEQIKHRMFRDLPDLLRPSDLLVFN 68
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMR---VSPNSWSVYARPSKVIKKGDILHFFS 119
++VI A++ + ++ L V N WS Y +P+K G L
Sbjct: 69 ESRVIPARVLARKPVVNGFGGGQVEVLLLREEFDVGANVWSAYLKPAKR--AGHELWLGE 126
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ A V+ + G LL F +++ + +G +PLPPYI D
Sbjct: 127 NEATGH-RAEVVGVLDDGARLLRFDH---DIKPHLDEIGRLPLPPYINAGD-SDETWRER 181
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GSVAAPTAGLHFT LL+RL +G++ VTLHVGAGTF P++ DH+
Sbjct: 182 YQTVYAKTPGSVAAPTAGLHFTPELLARLDEMGVERASVTLHVGAGTFKPIQGP-VADHV 240
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH+E + A A+ K+ G R+V+VGTT++R LE+A + +G T IFITP
Sbjct: 241 MHAERYEVSETNAAAITRAKAEGRRVVAVGTTTVRTLESAWD-GAAVRAGAGETRIFITP 299
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
G R D+L++N HLP STLL+LV+AF G + + Y A+S YRFYS GD LL +
Sbjct: 300 GTRVEVPDLLITNLHLPGSTLLLLVAAFAGEDRIRAAYDAALSQDYRFYSLGDAMLLER 358
>gi|226954457|ref|ZP_03824921.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Acinetobacter sp. ATCC 27244]
gi|226834806|gb|EEH67189.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Acinetobacter sp. ATCC 27244]
Length = 349
Score = 388 bits (996), Expect = e-105, Method: Composition-based stats.
Identities = 135/359 (37%), Positives = 193/359 (53%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F FDLP IA P+ R ++RL+ + DH +D+ L D +V
Sbjct: 6 MQLSDFSFDLPDELIARYPLESRSASRLLHID----TQGQYHDHAFTDILDLLEDGDLLV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G R I + + ++ + + S K G L+
Sbjct: 62 LNDTKVMKARLKGKRA-----TGGAIEVLVERMLDTHTAHCHIKSSNSPKAGAELYI--- 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G+ + TV + L V S L + G +P+PPY R+ + D Y
Sbjct: 114 -GEDAVPVTVQGRHEN---LFVVKFSQPIL-SVLDQYGQLPIPPYFNRE--AEEIDTERY 166
Query: 181 QTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
QT + + SVAAPTA LHF +LL +L + G++ FVTLHVGAGTFMPV+ D +H
Sbjct: 167 QTVFHDPEKIASVAAPTASLHFDQSLLEKLATKGVQKTFVTLHVGAGTFMPVRTTDITNH 226
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFI 297
IMHSE + T + + K+RG ++++VGTT+ R LE+A + G I W+G T IFI
Sbjct: 227 IMHSEWCDVPQATIDLILATKARGNKVIAVGTTATRALESAAQANQGQIAAWTGDTQIFI 286
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+F VD L++NFHLP+STLLMLVSA + Y+HA+ YRF+SYGD L+
Sbjct: 287 YPGYQFCIVDRLITNFHLPESTLLMLVSALSNRDNILAAYKHAVEQRYRFFSYGDAMLI 345
>gi|15604084|ref|NP_220599.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
prowazekii str. Madrid E]
gi|7674179|sp|Q9ZDV6|QUEA_RICPR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|3860775|emb|CAA14676.1| S-ADENOSYLMETHIONINE:tRNA RIBOSYLTRANSFERASE-ISOMERASE (queA)
[Rickettsia prowazekii]
gi|292571808|gb|ADE29723.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase [Rickettsia
prowazekii Rp22]
Length = 383
Score = 387 bits (994), Expect = e-105, Method: Composition-based stats.
Identities = 144/404 (35%), Positives = 214/404 (52%), Gaps = 67/404 (16%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF+LP + IA P RD++ L++ ++ +L D +V
Sbjct: 1 MKLSDFDFNLPSALIAQYPSSERDNSDLLI------AGTKHIKTKFYNIIDYLKKGDLLV 54
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KVI A+L+ K I+ L+ ++S N W +A+P++ + GD +F
Sbjct: 55 FNNSKVIKAKLH---------LGKNITINLNKKLSDNCWIAFAKPARKLNIGDEFYF--- 102
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRP--------- 171
+ + +K GEI + F + I + + + G IPLP YI R P
Sbjct: 103 ---DTHKIIITEKLAIGEIKVKFMLDNISIIKFLDKYGEIPLPFYIKRPSPVCYSNMALC 159
Query: 172 ------------------------------------IDARDYVDYQTTYAKIQGSVAAPT 195
D YQT Y++I+GSVAAPT
Sbjct: 160 CKPENTLKIKSIPHNMSKIVTNNSNTVNLRSNDGIIDSTNDNDRYQTIYSQIEGSVAAPT 219
Query: 196 AGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQAL 255
AGLHFT N+L +L + G+ FVTLHVGAGTF+PVK E+ +H MH+E I TA+ +
Sbjct: 220 AGLHFTKNILDKLKTKGVHTAFVTLHVGAGTFLPVKTENIHEHKMHTEYCSITTETAEII 279
Query: 256 NSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHL 315
N K G I++VGTT+LR +E+A +GI+ + T+IFITPG+ F+ VD+L++NFH
Sbjct: 280 NKTKQEGRSIIAVGTTTLRTIESAC-NNGIVRAGNFETDIFITPGFNFQVVDMLLTNFHF 338
Query: 316 PKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
PKSTL +L+ AF G +E +Y++AI RF+SYGD +LL++K
Sbjct: 339 PKSTLFILICAFAGFKEMHALYKYAIKEKMRFFSYGDATLLYRK 382
>gi|37523156|ref|NP_926533.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Gloeobacter
violaceus PCC 7421]
gi|46576918|sp|Q7NFD9|QUEA_GLOVI RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|35214159|dbj|BAC91528.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Gloeobacter
violaceus PCC 7421]
Length = 352
Score = 387 bits (994), Expect = e-105, Method: Composition-based stats.
Identities = 137/358 (38%), Positives = 189/358 (52%), Gaps = 21/358 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +D+ LP IA +P PRD +RL+VV + DLP L D +V
Sbjct: 11 LTDSYDYALPERCIAQQPAEPRDHSRLLVVDGE-----AHTHRYFYDLPGLLRPGDLLVL 65
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+VI A+L G + + L +P W +P++ + G + F
Sbjct: 66 NDTRVIPARLFGSKAS-----GGRVEVLLLEPRAPREWLCLVKPARRLAVGARIDF---- 116
Query: 122 GQSRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A V + TG L F + E + VG PLPPY+ R D Y
Sbjct: 117 -DGVLAARVTELDAETGGRWLRFEGE-EDFEAALERVGHTPLPPYLKTGRTRD----ERY 170
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A G+VAAPTAGLHF+ LL+RL GI+ VTLHVG GTF PV+ H M
Sbjct: 171 QTLWASRPGAVAAPTAGLHFSGELLARLAERGIERATVTLHVGLGTFRPVQSVSVHTHRM 230
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I TA A+ +SRGGR+++VGTTS R LE+A +G+ G + +F+ PG
Sbjct: 231 HREWYEIPEATAIAIERTRSRGGRVLAVGTTSARALESAAQPNGLPATGPGRSELFVYPG 290
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
YR+R V+ L++NFHLP+S+LLMLVS+ G E +Y+ A+ YRFYS+GD L+
Sbjct: 291 YRWRVVEGLITNFHLPRSSLLMLVSSLVGRERLLALYREAVDKGYRFYSFGDAMLILP 348
>gi|303235950|ref|ZP_07322553.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella disiens FB035-09AN]
gi|302483823|gb|EFL46815.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella disiens FB035-09AN]
Length = 394
Score = 386 bits (993), Expect = e-105, Method: Composition-based stats.
Identities = 122/400 (30%), Positives = 186/400 (46%), Gaps = 49/400 (12%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVHPNLSCPLVIS 42
M + +F F+LP ++AL P V RD ARLMV+H + +
Sbjct: 1 MKLSQFKFNLPKEQVALYPHSSERVLNRADGTSQVFKVTRRDEARLMVLHKKSGTIDMYN 60
Query: 43 DH-----------LVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLH 91
D+ + + D VFN+TKV A+L G + + + +I L
Sbjct: 61 KEVKGEPTEEDYIRFKDVVNYFDEGDTFVFNDTKVFPARLYGTK----EKTDAKIEVFLL 116
Query: 92 MRVSP--NSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGI- 148
++ W V P++ I+ G+ L F D + A VID + L F
Sbjct: 117 RELNQEMRLWDVLVEPARKIRIGNKLFF---DESGSMVAEVIDNTTSRGRTLRFLYDCPH 173
Query: 149 -ELERQISLVGTIPLPPYIARKRP---------IDARDYVDYQTTYAKIQGSVAAPTAGL 198
E ++++ +G PLP YI R DA D ++QT +AK +G+V AP L
Sbjct: 174 EEFKKELYALGEAPLPRYIIDNREKEAGEDFAHADAADLENFQTVFAKHEGAVTAPGTNL 233
Query: 199 HFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSV 258
HF+ +L+ L GI F+TLH G G F ++VED H M SE I+A Q +N
Sbjct: 234 HFSEHLMKMLEIKGIHSAFITLHCGLGNFHNIEVEDLTKHKMDSEEMHINAEACQIVNDT 293
Query: 259 KSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKS 318
K R+ ++G + ++ ETA DG++ + G+TN FI P Y F + ++ NF+ P S
Sbjct: 294 KLANHRVCAIGASVVKATETAVGTDGMLKEYDGWTNKFIFPPYDFGLANSMLVNFYHPYS 353
Query: 319 TLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
TLLM +AF G + + Y A+ Y+F +GD L+
Sbjct: 354 TLLMETAAFGGYDLVMEAYDKAVKGGYQFGCFGDALLILN 393
>gi|332040561|gb|EGI76937.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Hylemonella gracilis ATCC 19624]
Length = 389
Score = 386 bits (993), Expect = e-105, Method: Composition-based stats.
Identities = 137/366 (37%), Positives = 196/366 (53%), Gaps = 15/366 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDF LPP IA P R ++RL+ + + D + +LP L D +VF
Sbjct: 32 TLSDFDFALPPELIAQHPAPERSASRLLD-GRDARPGALPVDRIFRELPGLLQPGDLLVF 90
Query: 62 NNTKVITAQLNGVRFCHINRR----EKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
N+TKV+ A+L G + ++ + ++ + + + SK G +L
Sbjct: 91 NDTKVVKARLFGNKPAPARGATSPIGGKLELLIERVLTGHEVVAHMKVSKKPAVGTVLQ- 149
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
A ++ +W + L E + + G +PLPPYI D D
Sbjct: 150 ----MAGGYTAELLGRWPDEDGQLFRLRFSDEPHKLMEQHGHVPLPPYINHSDNDD--DV 203
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT +A G+ AAPTA LHF +L+ L + G+K VTLHVGAGTF PVK E+ +
Sbjct: 204 ARYQTVFAAKPGAAAAPTAALHFDEAVLAALDARGVKRANVTLHVGAGTFSPVKTENLAE 263
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDG---IINPWSGFTN 294
H MH E + A T QA+ ++ GGRIV+VGTT++R LE+ G SG T+
Sbjct: 264 HRMHREWYDVPAATQQAIRDTQANGGRIVAVGTTTIRTLESWARSAGPGLSGGQTSGDTD 323
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFITPG+ F+ D+L++NFHLPKSTL+MLVSAF G E +Y+HAI+ YRF+SYGD
Sbjct: 324 IFITPGFEFKVADLLITNFHLPKSTLMMLVSAFAGYEHIMALYRHAIAQRYRFFSYGDAM 383
Query: 355 LLFQKR 360
+L + R
Sbjct: 384 VLERVR 389
>gi|195952881|ref|YP_002121171.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Hydrogenobaculum sp. Y04AAS1]
gi|229892798|sp|B4U7T2|QUEA_HYDS0 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|195932493|gb|ACG57193.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Hydrogenobaculum sp. Y04AAS1]
Length = 343
Score = 386 bits (992), Expect = e-105, Method: Composition-based stats.
Identities = 132/363 (36%), Positives = 189/363 (52%), Gaps = 26/363 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FD+DLP IA PV PR SA+LMV+ S I+ + FL D ++
Sbjct: 1 MDISLFDYDLPEELIAKYPVNPRHSAKLMVLDRKSSN---ITHSTFWHIDEFLEEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKV+ A+L G + N + L + W K IK G ++
Sbjct: 58 FNDTKVLPARLLGKKKGIENSN---VEILLLRHLENEKWEALVG-GKNIKPGLVIEI--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
EA V + + L++ I+ G IP+PPY+ R + D Y
Sbjct: 111 --SYDFEAIVESQIEKSKFLVLLKAKNQNQIEAINKYGKIPIPPYLGRDE--EPIDKEFY 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +AK + SVAAPTA LHF++ LL +L + + FVTLHV GTF PV V++ ++H +
Sbjct: 167 QTVFAKKEFSVAAPTASLHFSNELLEKLKKK-VNIDFVTLHVSYGTFKPVTVQNIEEHKV 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
E + + + K R+++VGTT R LETA P+ GFT+++I PG
Sbjct: 226 DEEYIEVSESLIKNIKKTKKMCKRVIAVGTTVTRALETAID-----KPYFGFTDLYIKPG 280
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFC------GIEETKKMYQHAISHAYRFYSYGDTS 354
++F+ +D ++NFHLPKS+LL+LVSAFC G E K Y+ A+ H YRFYSYGD
Sbjct: 281 FKFKVLDGFITNFHLPKSSLLILVSAFCNEENLDGREFILKSYKEAVKHKYRFYSYGDGM 340
Query: 355 LLF 357
L+
Sbjct: 341 LIL 343
>gi|210635246|ref|ZP_03298458.1| hypothetical protein COLSTE_02389 [Collinsella stercoris DSM 13279]
gi|210158464|gb|EEA89435.1| hypothetical protein COLSTE_02389 [Collinsella stercoris DSM 13279]
Length = 413
Score = 386 bits (991), Expect = e-105, Method: Composition-based stats.
Identities = 126/416 (30%), Positives = 190/416 (45%), Gaps = 69/416 (16%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLV-------------ISDHLVS 47
M +FD++LP IA P PRDS RL+V++ L +
Sbjct: 6 MRTDDFDYNLPDELIAQAPAEPRDSCRLLVLNRELEGGPARAVDAVALAHGGSVEHRHFY 65
Query: 48 DLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP-----NSWSVY 102
D+ +L D +V N T+V+ A+L G + L R + W
Sbjct: 66 DIIDYLEPGDLLVANQTRVMPARLIGKKPTGGVA-----ETLLLRRREDIDALGHVWECL 120
Query: 103 ARPSKVIKKGDILH------FFSQDGQSRLEATVIDKWNT--GEILLVFSISGI------ 148
P K +K G+++ + L A ++D + G L+ F G
Sbjct: 121 VNPGKRLKPGNVVEYRAGGLLAPEGSPVVLRAEIVDFVDDSKGGRLVRFEPVGANEQGEP 180
Query: 149 -ELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYA-KIQGSVAAPTAGLHFTSNLLS 206
L+ I G +PLPPYI D YQT YA + S AAPTAGLHFT L+
Sbjct: 181 RTLDEAIHAAGHVPLPPYITGYEG----DPEKYQTVYAMSEEHSAAAPTAGLHFTPELIE 236
Query: 207 RLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIV 266
R+ + G V L VG TF V+ +D +H+MH+E + A +A+++ K+ G R++
Sbjct: 237 RIKAKGCGWATVELEVGIDTFRLVEEDDPTEHVMHTERYHVPAEVVEAVHAAKAAGRRVI 296
Query: 267 SVGTTSLRLLETAT------------------TEDGIINPWSGF--------TNIFITPG 300
+VGTT++R LE+A EDG +G TN+++ PG
Sbjct: 297 AVGTTAVRSLESAWDANAAASVPPVTARGFEGREDGADMCGAGDIVTREDATTNLYLMPG 356
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ VD L++NFH+P+STL+MLVSA ++ Y+ A+ YRF+S+GD L+
Sbjct: 357 STYHVVDALITNFHVPRSTLMMLVSALATRDQVIDAYEEAVRERYRFFSFGDAMLI 412
>gi|304382488|ref|ZP_07364983.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
marshii DSM 16973]
gi|304336319|gb|EFM02560.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
marshii DSM 16973]
Length = 439
Score = 386 bits (991), Expect = e-105, Method: Composition-based stats.
Identities = 122/404 (30%), Positives = 187/404 (46%), Gaps = 53/404 (13%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVHPNLSCPLVIS 42
M + +F+F L ++AL P V RD +LMV+H +
Sbjct: 42 MKLSQFNFKLTDDKVALYPHTDEHRVTNAEGKKSVFKVKRRDECKLMVLHRKSQKIDMYK 101
Query: 43 DHL----------------VSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEI 86
++ + + DA +FN+TKV A+L G + + + +I
Sbjct: 102 TDKDGKPLKDKKKKPVFLDFRNILDYFDEGDAFIFNDTKVFPARLYGTK----EKTDAKI 157
Query: 87 SCTLHMRVSP--NSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFS 144
L ++ W V P++ I+ G+ L F D + A VID + L F
Sbjct: 158 EVFLLRELNAEMRLWDVLVEPARKIRIGNKLFF---DDSGTMVAEVIDNTTSRGRTLRFL 214
Query: 145 ISGI--ELERQISLVGTIPLPPYIAR--------KRPIDARDYVDYQTTYAKIQGSVAAP 194
E +R++ +G PLP YI RP D+ D+Q +AK +G+V AP
Sbjct: 215 YDCPHEEFKRELYALGEAPLPRYIIDHKDKDGNPDRPTLEEDFEDFQCVFAKNEGAVTAP 274
Query: 195 TAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQA 254
GLHF+ L+ R+ GI F+TLH G G F ++VED H M SE +I A +
Sbjct: 275 ATGLHFSRELMKRMEIKGINFAFITLHCGLGNFNNIEVEDLTKHKMESEQMYIGAEACRT 334
Query: 255 LNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFH 314
+N K G RI +VG++ ++ ETA DG + + G+T+ FI P Y F D +++NF+
Sbjct: 335 VNEAKKTGHRICAVGSSVIKATETAVGPDGQLKEYDGWTSKFIFPPYEFGLADTMVANFY 394
Query: 315 LPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
P STLLM +AF G + + Y A+ + Y+F YGD L+
Sbjct: 395 HPLSTLLMATAAFGGYDLVMEAYDLALKNDYKFGCYGDAMLILN 438
>gi|254476236|ref|ZP_05089622.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ruegeria
sp. R11]
gi|214030479|gb|EEB71314.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Ruegeria
sp. R11]
Length = 353
Score = 386 bits (991), Expect = e-105, Method: Composition-based stats.
Identities = 161/348 (46%), Positives = 216/348 (62%), Gaps = 14/348 (4%)
Query: 15 IALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGV 74
IA RP PR SARL+V + ISD V+DL +L D +V N+TKVI A+L+G
Sbjct: 15 IATRPAVPRTSARLLVAEAD-----QISDATVADLGQWLRPGDRLVLNDTKVIPARLSGQ 69
Query: 75 RF--CHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVID 132
R ++ TL + SWS +P K +K G+ + F Q L A +D
Sbjct: 70 RHRDTAQGPMAAKVEVTLLEPGADGSWSALLKPLKKVKLGEEIIFSDQ-----LSAR-LD 123
Query: 133 KWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVA 192
+ G+ L F++SG + + ++ G +PLPPYIA KR D +D DYQT +A+ G+VA
Sbjct: 124 RVEDGQGYLAFNLSGDDFDTALAEAGAMPLPPYIAAKRAADEQDKTDYQTVWARNSGAVA 183
Query: 193 APTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTA 252
APTA LHF LL++L +G+ +VTLHVGAGTF+PVKVED H MHSE G + A A
Sbjct: 184 APTASLHFDETLLAQLREMGVSFSYVTLHVGAGTFLPVKVEDVTTHKMHSEWGRVSADAA 243
Query: 253 QALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSN 312
+ + K+ GGR++ VGTT+LRL+E+A G I PW G T+IFI PG+ F D LM+N
Sbjct: 244 AEIAATKAAGGRVIPVGTTALRLIESAARS-GAIEPWEGDTDIFIYPGFTFNVADALMTN 302
Query: 313 FHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
FHLPKSTL+MLVSA G E +++Y+HA+S YRF+SYGD SLL +
Sbjct: 303 FHLPKSTLMMLVSALMGQERIREIYEHAVSQRYRFFSYGDASLLIPAK 350
>gi|124023814|ref|YP_001018121.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prochlorococcus marinus str. MIT 9303]
gi|166216737|sp|A2CBJ6|QUEA_PROM3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|123964100|gb|ABM78856.1| Queuosine biosynthesis protein [Prochlorococcus marinus str. MIT
9303]
Length = 371
Score = 386 bits (991), Expect = e-105, Method: Composition-based stats.
Identities = 132/359 (36%), Positives = 185/359 (51%), Gaps = 12/359 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D+ L P RIA PV PR +ARL++V P P + V D L + D +V
Sbjct: 9 LLSSYDYPLDPERIAQLPVEPRHAARLLIVQPLGMKPPIARHAEVWDWQEELRAGDLLVI 68
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L R + W RP+K ++ GD L +
Sbjct: 69 NDTRVLKARLRVRR-----SGGGLAELLVLEPRGEGRWLCLGRPAKRLRPGDQLWLEALG 123
Query: 122 GQSRLEATVIDKWNTGEILLVFSIS---GIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ + +G ++ F +LE + G +PLPPYI D D
Sbjct: 124 EEPIALQVISKDSASGGRVVQFPSHYANAEQLELLLERYGEVPLPPYIKCH---DPSDSE 180
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YA G+VAAPTAGLH + LL L G+ + VTLHVG GTF PV+ ED
Sbjct: 181 RYQTRYASRPGAVAAPTAGLHLSDELLEALKQRGVMLTSVTLHVGLGTFRPVETEDLRHL 240
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFI 297
+HSE + A+ + ++R GR+++VGTTS+R LE A G + + G ++ I
Sbjct: 241 QLHSEWVEVRDEVVAAVMACRARAGRVIAVGTTSVRALEGAALAGGGFLQSFCGPVDLVI 300
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGYRF VD L++NFHLPKS+LL+LVSA G E +Y AI H YRF+SYGD +
Sbjct: 301 QPGYRFAVVDGLLTNFHLPKSSLLLLVSAMVGRERLLALYAEAIEHHYRFFSYGDAMWI 359
>gi|198283826|ref|YP_002220147.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acidithiobacillus ferrooxidans ATCC 53993]
gi|218667799|ref|YP_002426463.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acidithiobacillus ferrooxidans ATCC 23270]
gi|226713831|sp|B5EK09|QUEA_ACIF5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|198248347|gb|ACH83940.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Acidithiobacillus ferrooxidans ATCC 53993]
gi|218520012|gb|ACK80598.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acidithiobacillus ferrooxidans ATCC 23270]
Length = 345
Score = 385 bits (990), Expect = e-105, Method: Composition-based stats.
Identities = 135/359 (37%), Positives = 202/359 (56%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M K+F ++LP + IA P+ R +AR+++V + D V DLP L D +V
Sbjct: 1 MHKKDFHYELPDALIAQAPLPERSAARMLIVDGHQGTW---EDAWVRDLPGVLRPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L + + L + A+ SK ++ G +H
Sbjct: 58 LNDTRVLPARLQARKT-----TGGAVELLLDRLLDARDGWFLAKSSKALRPGMSIHLPGG 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
A + G + + + + + G++PLPPYI +R +A D Y
Sbjct: 113 -------AVATVEEKDGMDVRLSLPADVAWLPILEAGGSMPLPPYI--RRAAEASDRERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA G+VAAPTAGLHF + LL L + G++ FVTLHVGAGTF+PV+ ED +H M
Sbjct: 164 QTVYAARPGAVAAPTAGLHFDTELLDALAARGVERTFVTLHVGAGTFLPVRSEDITEHPM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H+E + A T A+ + ++RGGR+++VGTT+ R LETA + G + P++G T +F+ PG
Sbjct: 224 HAETMEVSATTVAAVAAARARGGRVIAVGTTACRALETAA-QGGTLRPFTGETRLFLYPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
F+ D L++NFHLP+STLLMLV AF G+E Y+HA++ YRF+SYGD L+ +
Sbjct: 283 KTFQVTDGLLTNFHLPESTLLMLVCAFAGMECMLAAYRHAVAEGYRFFSYGDAMLISPQ 341
>gi|157825416|ref|YP_001493136.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
akari str. Hartford]
gi|166216746|sp|A8GMK3|QUEA_RICAH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|157799374|gb|ABV74628.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
akari str. Hartford]
Length = 371
Score = 385 bits (990), Expect = e-105, Method: Composition-based stats.
Identities = 140/393 (35%), Positives = 213/393 (54%), Gaps = 56/393 (14%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF+LP IA P RD++ L++ + ++ +L D +V
Sbjct: 1 MKLSAFDFNLPSELIAQSPSSERDNSDLLI------AAMPPIKTKFYNIIDYLKEGDLLV 54
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN+KVI A+L+ + ++ L+ ++S +SWS +A+P++ + D +F
Sbjct: 55 LNNSKVIKAKLHLWKN---------VTINLNQKLSDDSWSAFAKPTRKLHVNDEFYF--- 102
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIAR------------ 168
+ + +K GEI + F + I + + G +PLP YI R
Sbjct: 103 ---DNHKVIITEKLVMGEIKVKFDLDNISVFEFLDKYGEMPLPVYIRRSHSLYHTTSTLC 159
Query: 169 ----------------------KRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLS 206
K D YQT Y++I+GSVAAPTAGLHFT+++L
Sbjct: 160 HTRENGYSEKLDAFFRRNDIKDKDNDIVYDNERYQTIYSQIEGSVAAPTAGLHFTNDILD 219
Query: 207 RLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIV 266
+L + GI F+TLHVGAGTF+PVK E+ +H MH+E I TA+ +N K RI+
Sbjct: 220 KLKTKGIHTAFLTLHVGAGTFLPVKTENIHEHKMHTEYCSITPETAEIINKAKQERRRII 279
Query: 267 SVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSA 326
+VGTT+LR +E+ +GII S T+IFITPG++F+ D+L++NFH PKSTL ML+ A
Sbjct: 280 AVGTTTLRTVESFC-NNGIIKAGSFETDIFITPGFKFQTADMLLTNFHFPKSTLFMLICA 338
Query: 327 FCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
F G +E ++Y++AI RF+SYGD +LL++K
Sbjct: 339 FAGFKEMHELYKYAIKEKMRFFSYGDATLLYRK 371
>gi|291514902|emb|CBK64112.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Alistipes
shahii WAL 8301]
Length = 336
Score = 385 bits (989), Expect = e-105, Method: Composition-based stats.
Identities = 127/346 (36%), Positives = 185/346 (53%), Gaps = 16/346 (4%)
Query: 16 ALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVR 75
A P RD +RLMV++ I + D+ + + D VFN+TKV A+L G +
Sbjct: 3 AKYPADNRDESRLMVINRAKGT---IEHRIFKDIIEYFDEKDLFVFNDTKVFPARLYGNK 59
Query: 76 FCHINRREKEISCTLHMRV--SPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDK 133
+ EI L + W V P++ I+ G+ L+F D L A VID
Sbjct: 60 ----EKTGAEIEIFLLRELNRELRLWDVLVDPARKIRIGNKLYFGDDD---LLVAEVIDN 112
Query: 134 WNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSV 191
+ L F G E + + +G PLP ++ K ++ D YQT +A+ +G+V
Sbjct: 113 TTSRGRTLRFLFDGSYEEFKHALFALGETPLPKWVREK--VEPEDAERYQTIFAEKEGAV 170
Query: 192 AAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPT 251
AAPTAG+HF+ +L+ R+ GI FVTLHVG G F V VED H M SE F++
Sbjct: 171 AAPTAGMHFSKHLMKRMEIKGIDKTFVTLHVGLGNFRTVDVEDLSKHKMDSEQFFVEEAA 230
Query: 252 AQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMS 311
A+A+N+ K + ++V++GTT +R +ETA + +G+I P G+TN FI Y F D +++
Sbjct: 231 AEAVNAAKRQERKVVAIGTTVMRTIETAVSTNGMIKPMEGWTNKFIFAPYEFTVADAMVT 290
Query: 312 NFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
N HLP ST LM+V+AF G E Y+ A YRF +YGD L+
Sbjct: 291 NLHLPYSTQLMMVAAFGGYETVMNAYKVAKEEGYRFGTYGDAMLIL 336
>gi|32473565|ref|NP_866559.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodopirellula baltica SH 1]
gi|32398245|emb|CAD78340.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodopirellula baltica SH 1]
Length = 402
Score = 384 bits (988), Expect = e-105, Method: Composition-based stats.
Identities = 146/373 (39%), Positives = 203/373 (54%), Gaps = 27/373 (7%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +D++LP IA P+ R ARLMV+ I H V DLP L + D +V N
Sbjct: 37 LDLYDYELPRELIAQEPLQNRVDARLMVIDRASG---EIEHHHVRDLPQLLRAEDVMVKN 93
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
N++V+ A+L G R R + L + W + + ++ G+ + +D
Sbjct: 94 NSRVVPARLFGRRTKTGGRWQG---LFLRSDRATGVWELLTKTRGTLQTGETITLDDRDA 150
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELE---------RQISLVGTIPLPPYIARKRPID 173
++ E VI + + G LLV + E + + G +P+PPYI +D
Sbjct: 151 RAGGELMVIGRDDQGH-LLVQPVPNESFEGPPQAIEPGKWLDKYGRVPIPPYIRDGHMVD 209
Query: 174 ARDYVDYQTTYA----KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
A D +YQT +A + GSVAAPTAGLHFT LL + VTLHVG GTF P
Sbjct: 210 A-DVTNYQTVFASTNPEDAGSVAAPTAGLHFTKQLLDEIAKGQTASAEVTLHVGIGTFRP 268
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED------ 283
++V+D D H MH E G ID + +N +S GGR V+VGTTS+R+LE+
Sbjct: 269 IEVDDIDQHQMHEEWGRIDEDAVETINDRRSGGGRCVAVGTTSVRVLESCVANRNETNGR 328
Query: 284 GIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISH 343
G+ W+G T+IFI P YRF VD LM+NFHLPKS+LL+LVSAF G E ++ YQ AI++
Sbjct: 329 GVAATWTGATDIFIKPPYRFGVVDALMTNFHLPKSSLLVLVSAFAGHELIRRAYQEAIAN 388
Query: 344 AYRFYSYGDTSLL 356
YRF+SYGD L+
Sbjct: 389 EYRFFSYGDAMLI 401
>gi|153004186|ref|YP_001378511.1| queuosine biosynthesis protein [Anaeromyxobacter sp. Fw109-5]
gi|166216697|sp|A7H9Y1|QUEA_ANADF RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|152027759|gb|ABS25527.1| Queuosine biosynthesis protein [Anaeromyxobacter sp. Fw109-5]
Length = 345
Score = 384 bits (988), Expect = e-105, Method: Composition-based stats.
Identities = 141/361 (39%), Positives = 200/361 (55%), Gaps = 21/361 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD++LP +A PV PRD++RL+V+ + +DLP L D +V
Sbjct: 1 MRLSDFDYELPEELVAQEPVTPRDASRLLVLPREGAA----EHRAFTDLPDLLAPGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN---SWSVYARPSKVIKKGDILHF 117
FN+TKVI A+L G + ++ L + W + SK I++G L F
Sbjct: 57 FNDTKVIPARLVGTKP-----TGGKVELLLCEPLGGGLGSRWRAMGQASKPIREGTTLLF 111
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
LEA V G ++ G LE ++ G IPLPPYI +R D
Sbjct: 112 ------EGLEARVEASEGEGFYVVTLDREGEALEAALARAGRIPLPPYI--RRAPSDVDR 163
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT +A+ GS AAPTAGLHFT +L+RL + G++ VTLHVG GTF+PV+ + +
Sbjct: 164 ERYQTIWARAPGSAAAPTAGLHFTEAILARLAARGVERTAVTLHVGPGTFLPVRGDSVEG 223
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+E + A A+ + ++RG R+V+VGTTS+R LE+A + T +F+
Sbjct: 224 HRMHAEQYEVRPEAAAAIAACRARGSRVVAVGTTSVRTLESAWRGGAVAAGAG-RTALFV 282
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG+ FRAVD L++NFHLP+STLLMLV AF G Y+ A++ YRF+SYGD LL
Sbjct: 283 RPGHAFRAVDALVTNFHLPRSTLLMLVCAFGGTHRVLAAYRDAVARRYRFFSYGDAMLLA 342
Query: 358 Q 358
+
Sbjct: 343 R 343
>gi|221194651|ref|ZP_03567708.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Atopobium
rimae ATCC 49626]
gi|221185555|gb|EEE17945.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Atopobium
rimae ATCC 49626]
Length = 387
Score = 384 bits (988), Expect = e-105, Method: Composition-based stats.
Identities = 128/397 (32%), Positives = 183/397 (46%), Gaps = 52/397 (13%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+DLP IA P PRDS RL+V+H + I D+ +L+ D IV
Sbjct: 1 MRTDDFDYDLPDELIAQTPAEPRDSCRLLVLHRDDGS---IEHRHFRDIVEYLDPGDLIV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP-----NSWSVYARPSKVIKKGDIL 115
N T+V+ A+L G + L R + W P K +K G I+
Sbjct: 58 ANKTRVMPARLVGRK----RETGGVSETLLLKRREDLDPLGHLWECLVSPGKRLKPGAII 113
Query: 116 HFFSQDGQSRLEATVIDKWN--------TGEILLVFSISGI-ELERQISLVGTIPLPPYI 166
+ + + L + V+ G L+ F G L+ I G +PLPPYI
Sbjct: 114 EYRAGGLHAPLTSPVVLCGEIVDFVEGSKGGRLVRFEAPGTQALDEAIHAAGHVPLPPYI 173
Query: 167 ARKRPIDARDYVDYQTTYA-KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAG 225
D YQT YA + + S AAPTAGLHFT L+ + + GI V L VG
Sbjct: 174 TDYEG----DPEKYQTVYAMQDEHSAAAPTAGLHFTPELIEDIKTHGITWESVELEVGID 229
Query: 226 TFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-- 283
TF V+ +D H++H+E + A+ + K+ G R++++GTTS+R LE+A D
Sbjct: 230 TFRLVEEDDPTQHVIHTERYHVSQGVIDAIRTTKAEGHRVIAIGTTSVRSLESAWDGDAC 289
Query: 284 -----------------------GIINPWS-GFTNIFITPGYRFRAVDILMSNFHLPKST 319
G + TN+++ PG F VD +++NFH+P+ST
Sbjct: 290 ASNPAITARYFEDASGSARITKTGDLVARENATTNLYLMPGSTFHVVDAMVTNFHVPRST 349
Query: 320 LLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
L+MLVSAF E Y AI YRF S+GD L+
Sbjct: 350 LMMLVSAFASRESIMSAYDAAIKERYRFLSFGDAMLI 386
>gi|189502170|ref|YP_001957887.1| hypothetical protein Aasi_0780 [Candidatus Amoebophilus asiaticus
5a2]
gi|226736728|sp|B3ESF6|QUEA_AMOA5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|189497611|gb|ACE06158.1| hypothetical protein Aasi_0780 [Candidatus Amoebophilus asiaticus
5a2]
Length = 348
Score = 384 bits (987), Expect = e-104, Method: Composition-based stats.
Identities = 120/361 (33%), Positives = 180/361 (49%), Gaps = 17/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F F LP IA PV R+ ARLMVVH I DL +L ND +V
Sbjct: 1 MKLSSFKFTLPSKLIASHPVENREDARLMVVHKRTG---QIEHKTFKDLIDYLGENDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVS--PNSWSVYARPSKVIKKGDILHFF 118
N+ K+ ++L G + + +I L + + W P++ I+ G+ L+F
Sbjct: 58 LNDAKIFPSKLYGSK----EKTGAQIEVFLLRELESGEHLWDTLVEPARKIRVGNKLYF- 112
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
G L A V+D + L F G E + +G +PLP + RK + D
Sbjct: 113 ---GDGELVAEVLDNTTSRGRTLKFLFEGTREEFYEIVDQLGFVPLPNQLKRK--PETED 167
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YA+ G+V P AGLHF+++LL RL G+ + +TLH+G + + VED
Sbjct: 168 RERYQTVYAQHIGAVVPPFAGLHFSAHLLKRLELKGVHITPLTLHIGLNSMKIIDVEDLT 227
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+ + SE I T +N+ ++ +VGT++++ LET+ + G + P G+TN
Sbjct: 228 KYRIGSEQFLIPDNTVTTVNTALDDKKQVCAVGTSTIKALETSVSVAGRLKPAQGWTNKL 287
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F+ L++NFHLP+S L+ +AF G E + YQ AI YRF+ YGD L+
Sbjct: 288 IFPPYDFKVCTSLITNFHLPESLPLVNAAAFGGYELMMEAYQIAIKEKYRFFVYGDAMLI 347
Query: 357 F 357
Sbjct: 348 I 348
>gi|116748011|ref|YP_844698.1| queuosine biosynthesis protein [Syntrophobacter fumaroxidans MPOB]
gi|116697075|gb|ABK16263.1| Queuosine biosynthesis protein [Syntrophobacter fumaroxidans MPOB]
Length = 357
Score = 384 bits (986), Expect = e-104, Method: Composition-based stats.
Identities = 134/363 (36%), Positives = 195/363 (53%), Gaps = 21/363 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++E+D+DLPPS IA P+ R+ +RL+V+ + DLP L++ D +V
Sbjct: 9 RLREYDYDLPPSLIAQSPLSRREESRLLVLDRGRGA---MDHVRFRDLPDHLHAEDLLVV 65
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTL------HMRVSPNSWSVYARPSKVIKKGDIL 115
N+T+V+ A+L G + I + + + A +K + G ++
Sbjct: 66 NDTRVVPARLIGFKDS-----GGRIELLVTEPYKSEAEGRRDGYWCLAAAAKRTRPGCLI 120
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID-A 174
A V++ + G I + F L +S +G +PLPPYI R D
Sbjct: 121 SLPDGT-----VAEVLEAGDGGRIRVRFP-DDRPLMTILSEIGAVPLPPYINRSGTGDFP 174
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D YQT YA+ G+VAAPTAGLHF+S LL + G++V +TLHVG GTF P++V+D
Sbjct: 175 GDAEAYQTVYARNPGAVAAPTAGLHFSSALLEAVARAGVEVVRITLHVGYGTFAPIRVDD 234
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
DH MH E +D + + + S R RIV+VGTT +R LE G I P +G
Sbjct: 235 IRDHEMHPEYVRVDEDSTERIRSAIDRKRRIVAVGTTVVRSLEWIAHRRGEIMPAAGACA 294
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
+I PGYRF+ VD +++NFHLP+S+LL+LVSAF G + Y+ AI YRF+SYGD
Sbjct: 295 HYIYPGYRFKVVDAMITNFHLPRSSLLLLVSAFAGRRRILEAYREAIRREYRFFSYGDAM 354
Query: 355 LLF 357
L+
Sbjct: 355 LIL 357
>gi|51473411|ref|YP_067168.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rickettsia
typhi str. Wilmington]
gi|81610818|sp|Q68XF6|QUEA_RICTY RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|51459723|gb|AAU03686.1| S-adenosylmethionine tRNA ribosyltransferase-isomerase [Rickettsia
typhi str. Wilmington]
Length = 375
Score = 384 bits (986), Expect = e-104, Method: Composition-based stats.
Identities = 144/396 (36%), Positives = 218/396 (55%), Gaps = 59/396 (14%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF++P + IA P RD++ L++ ++ +L D +V
Sbjct: 1 MKLSDFDFNVPNALIAQYPSSERDNSDLLI------AGTKHIKTKFYNIIDYLKEGDLLV 54
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KVI A+L+ K I+ L+ ++S N W +A+P++ + GD +F
Sbjct: 55 FNNSKVIKAKLH---------LGKNITINLNKKLSDNCWGAFAKPARKLNIGDEFYF--- 102
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARK----------- 169
+ + +K GEI + F ++ I + + + G +PLP YI R
Sbjct: 103 ---DTHKIIITEKLAMGEIKVKFILNNISMIKFLDKYGEMPLPFYIKRTSSVCCSNMALF 159
Query: 170 ---------------------RPIDA-----RDYVDYQTTYAKIQGSVAAPTAGLHFTSN 203
R D+ D YQT Y++I+GSVAAPTAGLHFT +
Sbjct: 160 CDHDNTLKITSISHNSNTVNFRSTDSMIDSTNDNDRYQTIYSQIEGSVAAPTAGLHFTKD 219
Query: 204 LLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGG 263
+L +L + GI FVTLHVGAGTF+PVK E+ H MH+E I A TA+ +N K +G
Sbjct: 220 ILDKLKTKGINTAFVTLHVGAGTFLPVKTENIHKHKMHTEYCSITAETAEIINKTKQKGR 279
Query: 264 RIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLML 323
I++VGTT+LR LE+ + +GI+ + T+IFITPG+ F+ VD+L++NFH PKSTL +L
Sbjct: 280 DIIAVGTTTLRTLES-SCNNGIVKAGNFETDIFITPGFNFQIVDMLLTNFHFPKSTLFIL 338
Query: 324 VSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
+ AF G +E +Y++AI RF+SYGD +LL++K
Sbjct: 339 ICAFAGFKEMHALYKYAIKEKMRFFSYGDATLLYRK 374
>gi|327541677|gb|EGF28201.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rhodopirellula baltica WH47]
Length = 402
Score = 384 bits (986), Expect = e-104, Method: Composition-based stats.
Identities = 145/373 (38%), Positives = 203/373 (54%), Gaps = 27/373 (7%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +D++LP IA P+ R ARLMV+ I H V DLP L + D +V N
Sbjct: 37 LDLYDYELPRELIAQEPLQNRVDARLMVIDRASG---EIEHHHVRDLPQLLRAEDVMVKN 93
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
N++V+ A+L G R R + L + W + + ++ G+ + +D
Sbjct: 94 NSRVVPARLFGRRTKTGGRWQG---LFLRSDRATGVWELLTKTRGTLQTGETITLDDRDA 150
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELE---------RQISLVGTIPLPPYIARKRPID 173
++ E VI + + G LLV + E + + G +P+PPYI +D
Sbjct: 151 RADGELMVIGRDDQGH-LLVQPVPNESFEGPPQAIEPGKWLDKYGRVPIPPYIRDGHMVD 209
Query: 174 ARDYVDYQTTYA----KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
A D +YQT +A + GSVAAPTAGLHFT LL + VTLHVG GTF P
Sbjct: 210 A-DVTNYQTVFASTNPEDAGSVAAPTAGLHFTKQLLDEIAKGQTASAEVTLHVGIGTFRP 268
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED------ 283
++V+D D H MH E G I+ + +N +S GGR V+VGTTS+R+LE+
Sbjct: 269 IEVDDIDQHQMHEEWGRIEEDAVETINDRRSGGGRCVAVGTTSVRVLESCVANRNETNGR 328
Query: 284 GIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISH 343
G+ W+G T+IFI P YRF VD LM+NFHLPKS+LL+LVSAF G E ++ YQ AI++
Sbjct: 329 GVAATWTGATDIFIKPPYRFGVVDALMTNFHLPKSSLLVLVSAFAGHELIRRAYQEAIAN 388
Query: 344 AYRFYSYGDTSLL 356
YRF+SYGD L+
Sbjct: 389 EYRFFSYGDAMLI 401
>gi|319651691|ref|ZP_08005818.1| S-adenosylmethionine-tRNA-ribosyltransferase-isomerase [Bacillus
sp. 2_A_57_CT2]
gi|317396758|gb|EFV77469.1| S-adenosylmethionine-tRNA-ribosyltransferase-isomerase [Bacillus
sp. 2_A_57_CT2]
Length = 286
Score = 383 bits (985), Expect = e-104, Method: Composition-based stats.
Identities = 126/298 (42%), Positives = 175/298 (58%), Gaps = 14/298 (4%)
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G + I L ++ +SW +P+K +K+G + F
Sbjct: 2 LNDTKVLPARLFGEK----TGTGANIEVLLLKQLEGDSWETLVKPAKRVKEGTEITF--- 54
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L A + G +L F GI + +G +PLPPYI + D Y
Sbjct: 55 -GNGNLTAVCTGTSDHGGRVLEFKYDGI-FYEVLEELGEMPLPPYIKEQLD----DRDRY 108
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +GS AAPTAGLHFT LL + +G+ + F+TLHVG GTF PV V+D ++H M
Sbjct: 109 QTVFARERGSAAAPTAGLHFTEQLLEEIKEMGVHIAFITLHVGLGTFRPVSVDDLNEHEM 168
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
H+E + TA+ LN V+ +GGRI+SVGTTS R LET A+ +G SG+T+IFI P
Sbjct: 169 HAEFYQVTEGTARLLNEVREQGGRIISVGTTSTRTLETIASMHNGRFEEASGWTDIFIYP 228
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
GY F+A+D +++NFHLPKSTL+MLVSA G E Y A+ YRF+S+GD L+
Sbjct: 229 GYEFKAIDGMITNFHLPKSTLIMLVSALAGRENVLNAYNQAVEEHYRFFSFGDAMLII 286
>gi|189346056|ref|YP_001942585.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Chlorobium
limicola DSM 245]
gi|238692192|sp|B3EGG9|QUEA_CHLL2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|189340203|gb|ACD89606.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Chlorobium
limicola DSM 245]
Length = 343
Score = 383 bits (985), Expect = e-104, Method: Composition-based stats.
Identities = 128/361 (35%), Positives = 184/361 (50%), Gaps = 22/361 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD+ LP IA P R + RL+V+ P + L FL D ++
Sbjct: 1 MKVSDFDYTLPEDMIARYPPAERGTTRLLVLDPATGET---EHSRYAHLADFLKPGDLLL 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN+KV+ A++ + + I L + +KKGD L S+
Sbjct: 58 LNNSKVVRARMFASK-----KTGASIELMLLEKHEG--VQNLVLYRGRLKKGDRLIAHSE 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++++ + + + G +L +P+PPY+ KR +A D Y
Sbjct: 111 E-------LLVEEITGQGVARLSASDGSDLPHLFERHAEVPIPPYL--KREAEAVDAERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ GSVAAPTA L+ T+ LL+ L GI VTLHVG GTF+P++VE ++H+M
Sbjct: 162 QTVFAEQPGSVAAPTASLNMTAGLLAELGQKGIDTATVTLHVGLGTFLPIRVESFEEHVM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDG---IINPWSGFTNIFI 297
H E I T + K+ GGR+V+VGTT R LE A + P SG +IFI
Sbjct: 222 HREYYSIPFRTIDKIRRTKAGGGRVVAVGTTVTRALEHAAGSSCWGTSVAPASGEADIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGYRFR +D L++NFH P+ST+LML +AF G + Y AI YRF SYGD+ L+
Sbjct: 282 YPGYRFRVIDALLTNFHAPRSTVLMLTAAFAGQQNLLSAYHEAIEKQYRFLSYGDSMLIR 341
Query: 358 Q 358
Sbjct: 342 P 342
>gi|262377446|ref|ZP_06070669.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter lwoffii SH145]
gi|262307676|gb|EEY88816.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter lwoffii SH145]
Length = 344
Score = 383 bits (983), Expect = e-104, Method: Composition-based stats.
Identities = 130/363 (35%), Positives = 194/363 (53%), Gaps = 22/363 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F+FDLP IA P+ R ++RL+ + DH +D+ L D ++
Sbjct: 1 MQLSDFNFDLPDELIARYPLETRSASRLLHLD----TQGQYHDHQFTDILDLLEDGDLLI 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G R + + + + S K G L
Sbjct: 57 LNDTKVMKARLKGKRAS-----GGAVEVLVERMQDRFIAYCHIKASNTPKAGAELFI--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++ V + L + S L+ + G +P+PPY R+ + D Y
Sbjct: 109 -GPDAVKVIVQGRHEN---LFIVKFSQPILD-VLDQYGALPIPPYFNRE--AEEIDTERY 161
Query: 181 QTTYAK--IQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
QT + SVAAPTA LHF ++LL++L + GI+ FVTLHVGAGTF+PV+ +D +H
Sbjct: 162 QTVFNDPTKLASVAAPTASLHFDADLLAKLEAKGIQKTFVTLHVGAGTFLPVRTDDIQNH 221
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFI 297
IMHSE + + + K+RG +++SVGTT+ R +E+A +G + W+G T IFI
Sbjct: 222 IMHSEWCDVPETAVEMIRQTKARGNKVISVGTTATRAVESAAQAHNGELAAWTGDTQIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+F+ VD L++NFHLP+STLLMLVSA + Y+HA+ YRF+SYGD L+
Sbjct: 282 YPGYQFKVVDRLITNFHLPESTLLMLVSALSNRDNILNAYKHAVDSKYRFFSYGDAMLID 341
Query: 358 QKR 360
Q +
Sbjct: 342 QAK 344
>gi|282877728|ref|ZP_06286543.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella buccalis ATCC 35310]
gi|281300300|gb|EFA92654.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella buccalis ATCC 35310]
Length = 388
Score = 383 bits (983), Expect = e-104, Method: Composition-based stats.
Identities = 120/393 (30%), Positives = 186/393 (47%), Gaps = 43/393 (10%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVHPNLSCPLVIS 42
M + +F F+LP +AL P + RD +RLMV+H +
Sbjct: 1 MKLSQFKFNLPEELVALYPHSVYHEIVDDKGEKHLSRMTRRDESRLMVLHRKSQTIDMFQ 60
Query: 43 DHL-----------VSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLH 91
+ + + + D +FN+TKV A+L G + + + +I L
Sbjct: 61 KNKKGKPVEGQYLEFRHVLDYFDEGDTFIFNDTKVFPARLYGTK----EKTDAKIEVFLL 116
Query: 92 MRVSP--NSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGI- 148
++ W V P++ I+ G+ L F D + A VID + L F
Sbjct: 117 RELNREMRLWDVLVEPARKIRIGNKLFF---DESGTMVAEVIDNTTSRGRTLRFLYDCPH 173
Query: 149 -ELERQISLVGTIPLPPYIARKRP---IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNL 204
E +R++ +G PLP YI +R DA D D+QT +AK +G+V A GLH + +
Sbjct: 174 EEFKRELFALGEAPLPRYILNQREVPHADAHDMEDFQTIFAKNEGAVTAAATGLHVSREM 233
Query: 205 LSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGR 264
+ R+ GI ++TLH G F ++VED H M SE IDA + +N K G R
Sbjct: 234 MKRMEIKGIHFAYITLHCGLSAFNNIEVEDLTKHKMDSEPMKIDAQACKIVNKAKQEGHR 293
Query: 265 IVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLV 324
+ +VGT+ ++ ETA DG++ + G+T+ FI P Y F D +++NF+ S LLM
Sbjct: 294 VCAVGTSVVKATETAVGTDGLLKEYDGWTSKFIFPPYDFGLADTMIANFYHSMSPLLMET 353
Query: 325 SAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+AF G E + Y A+ H Y+F YGD+ L+
Sbjct: 354 AAFGGYELVMEAYNLAVKHGYKFGCYGDSLLIL 386
>gi|257784681|ref|YP_003179898.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Atopobium
parvulum DSM 20469]
gi|257473188|gb|ACV51307.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Atopobium
parvulum DSM 20469]
Length = 387
Score = 383 bits (983), Expect = e-104, Method: Composition-based stats.
Identities = 125/398 (31%), Positives = 189/398 (47%), Gaps = 52/398 (13%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD++LP RIA P PRDS RL+V+H I +D+ +L+ D +V
Sbjct: 1 MRTDDFDYNLPEERIAQTPAEPRDSCRLLVLHREDG---RIEHKRFTDIVEYLDPGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP-----NSWSVYARPSKVIKKGDIL 115
N T+V+ A+L G + L R + W P K +K G ++
Sbjct: 58 VNQTRVMPARLVGKK----QNTGGVSETLLLKRREDIDALGSVWECLVNPGKRLKPGAVI 113
Query: 116 HFFSQDGQSR------LEATVIDKWNT--GEILLVFSISGIE-LERQISLVGTIPLPPYI 166
+ + + L T++D + G L+ F G L+ I G +PLPPYI
Sbjct: 114 EYRAGGLHAPDSAPVVLTGTIVDFVDDNRGGRLVRFEAQGERTLDEAIHEAGHVPLPPYI 173
Query: 167 ARKRPIDARDYVDYQTTYA-KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAG 225
+ D YQT YA + + S AAPTAGLHFT L+ + + G++ V L VG
Sbjct: 174 TQYEG----DPEKYQTVYAMQDEHSAAAPTAGLHFTPKLIETIKAKGVQWASVELEVGID 229
Query: 226 TFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE-------- 277
TF V +D H++H+E + +A+ + K+ G +++++GTTS+R LE
Sbjct: 230 TFRLVTEDDPTKHVIHTERYHVAPEVVEAVKATKAAGHKVIAIGTTSVRSLESTWDSQLP 289
Query: 278 -----------------TATTEDGIINPWS-GFTNIFITPGYRFRAVDILMSNFHLPKST 319
A T G + TN+++ PG F VD +++NFH+P+ST
Sbjct: 290 ADEPPVVAHRFEEAEDSAAVTHKGDMVARENATTNLYLMPGSTFHVVDTMVTNFHVPRST 349
Query: 320 LLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
L+MLVSAF E+ YQ AI YRF S+GD ++
Sbjct: 350 LMMLVSAFATREQIMNAYQSAIDEKYRFLSFGDAMIII 387
>gi|260592691|ref|ZP_05858149.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
veroralis F0319]
gi|260535461|gb|EEX18078.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
veroralis F0319]
Length = 394
Score = 382 bits (982), Expect = e-104, Method: Composition-based stats.
Identities = 119/400 (29%), Positives = 189/400 (47%), Gaps = 49/400 (12%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVHPNLSCPLVI- 41
M + +F F+LP ++AL P + RD +RLMVVH +
Sbjct: 1 MKLSQFKFNLPKEQVALYPHSSKRVLTRSDGSTQTFTITRRDESRLMVVHRKSGKIDMFK 60
Query: 42 --------SDH--LVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLH 91
D D+ + DA +FN+TKV A+L G + + + +I L
Sbjct: 61 GEVNGDPTEDDYIRFKDVFDYFEEGDAFIFNDTKVFPARLYGTK----EKTDAKIEVFLL 116
Query: 92 MRVSP--NSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGI- 148
++ W V P++ I+ G+ L F D + A VID + L F
Sbjct: 117 RELNQEMRLWDVLVEPARKIRIGNKLFF---DESGTMVAEVIDNTTSRGRTLRFLYDCPH 173
Query: 149 -ELERQISLVGTIPLPPYIARKRPIDA---------RDYVDYQTTYAKIQGSVAAPTAGL 198
E +R++ +G PLP YI RP + D ++Q+ +A+ +G+V+AP +
Sbjct: 174 EEFKRELFALGEAPLPRYIIDNRPKEEGEEFAHATKEDMENFQSVFARNEGAVSAPGTNI 233
Query: 199 HFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSV 258
HF+ +++ + GIK F+TLH G G F ++VED H M SE I+A + N+
Sbjct: 234 HFSEHMMKMMEIRGIKKSFITLHCGLGNFHDIEVEDLTKHKMDSEEMHINAEACEIANNA 293
Query: 259 KSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKS 318
K G + +VG + ++ ETA DG++ + G+TN FI P Y F D ++ NF+ P S
Sbjct: 294 KKAGHHLCAVGASVVKATETAVGTDGMLKEYDGWTNEFIFPPYNFGFADSMLVNFYQPYS 353
Query: 319 TLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
TLLM +AF G + + Y A+ + Y F +GD+ L+
Sbjct: 354 TLLMETAAFGGYDLIMEAYDKAVKNGYMFGCFGDSLLILN 393
>gi|281423716|ref|ZP_06254629.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
oris F0302]
gi|299141219|ref|ZP_07034356.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
oris C735]
gi|281402268|gb|EFB33099.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
oris F0302]
gi|298577179|gb|EFI49048.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
oris C735]
Length = 388
Score = 382 bits (981), Expect = e-104, Method: Composition-based stats.
Identities = 120/392 (30%), Positives = 181/392 (46%), Gaps = 43/392 (10%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVHPNLSCPLVIS 42
M + +F F+L ++AL P V RD RLMV+H +
Sbjct: 1 MKLSQFKFNLAEEQVALYPHSFTRVFENEDGTKDSFQVTRRDECRLMVLHKRSGQIEMFK 60
Query: 43 DHL-----------VSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLH 91
++ + D +FN+TKV A+L G + + + +I L
Sbjct: 61 KDSKGNPIEGEYLDFRNILDYFGEGDTFIFNDTKVFPARLYGTK----EKTDAKIEVFLL 116
Query: 92 MRVSP--NSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLV--FSISG 147
++P W V P++ I+ G+ L F D + A VID + L +
Sbjct: 117 RELNPEMRLWDVLVEPARKIRIGNKLFF---DETGTMVAEVIDNTTSRGRTLRFLYDCDH 173
Query: 148 IELERQISLVGTIPLPPYIARKRP---IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNL 204
E +R++ +G PLP YI R D D+QT +AK +G+V AP GLHF+ L
Sbjct: 174 EEFKRELFALGEAPLPRYIIDNREEPHATPEDLEDFQTVFAKNEGAVTAPATGLHFSREL 233
Query: 205 LSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGR 264
+ R+ GI ++TLH G G F ++VED H M SE + A Q +N K
Sbjct: 234 MKRMEIRGIHDAYITLHCGLGNFNSIEVEDLTKHKMDSEQMIVSAEACQRVNQTKRERHH 293
Query: 265 IVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLV 324
+++VG + ++ ETA DG++ + G+TN FI P Y F D +++NF+ P STLLM
Sbjct: 294 VLAVGVSVVKATETAVGTDGMLKEYDGWTNKFIFPPYDFDLADSMVANFYHPYSTLLMTT 353
Query: 325 SAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+AF G E + Y A + Y F YGD L+
Sbjct: 354 AAFGGYEAVMECYNLAAENGYMFGCYGDALLI 385
>gi|71065959|ref|YP_264686.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Psychrobacter arcticus 273-4]
gi|91207397|sp|Q4FRV6|QUEA_PSYA2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|71038944|gb|AAZ19252.1| probable S-adenosylmethionine:tRNA -ribosyltransferase-isomerase
[Psychrobacter arcticus 273-4]
Length = 403
Score = 382 bits (981), Expect = e-104, Method: Composition-based stats.
Identities = 137/389 (35%), Positives = 201/389 (51%), Gaps = 48/389 (12%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
V ++D++LP IA P+ R +++L+ + P + + D L S+LP LN+ D IVFN
Sbjct: 29 VDDYDYELPDQLIARYPLAQRSASKLLYL-PTNNANSQVEDKLFSELPDILNAGDLIVFN 87
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHM--------------------------RVSP 96
+TKV+ A+L G + +I +
Sbjct: 88 DTKVMKARLFGQK-----DTGGKIEVLIERLVSLSDVNSAYLDEIIANSKTIDTTIIAEK 142
Query: 97 NSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISL 156
+ + + SK +K G L + +I + L + + L +
Sbjct: 143 HIALCHIKASKALKLGQGLVL----ADGHMTGIMIGRQEN---LFILAFDTPILPD-LEQ 194
Query: 157 VGTIPLPPYIARKRPIDARDYVDYQTTYAK--IQGSVAAPTAGLHFTSNLLSRLISIGIK 214
G +P+PPY R DA D YQT + SVAAPTA LHF +L +L + GI+
Sbjct: 195 YGELPIPPYFERH--ADATDNTRYQTVFHDPAKLASVAAPTASLHFDDIVLEKLAAKGIQ 252
Query: 215 VYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLR 274
FVTLHVGAGTF PVK ++ +H MHSE + TA+ +N + G +++++GTT R
Sbjct: 253 TAFVTLHVGAGTFAPVKTDNLLNHTMHSEYAHLPQATAELINQTHANGKQVIAIGTTVTR 312
Query: 275 LLETATTE----DGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGI 330
+LETA + ++ WSG T+IFI PG++F VD L++NFHLPKSTLLMLVSAF
Sbjct: 313 VLETAYQQTAVDGQSLSGWSGDTDIFIYPGFKFGVVDKLLTNFHLPKSTLLMLVSAFATK 372
Query: 331 EETKKMYQHAISHAYRFYSYGDTSLLFQK 359
+ ++ YQHAI YRF+SYGD LL ++
Sbjct: 373 KSIEQAYQHAIKSQYRFFSYGDAMLLDKQ 401
>gi|308233810|ref|ZP_07664547.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Atopobium
vaginae DSM 15829]
gi|328943700|ref|ZP_08241165.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Atopobium
vaginae DSM 15829]
gi|327491669|gb|EGF23443.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Atopobium
vaginae DSM 15829]
Length = 389
Score = 382 bits (981), Expect = e-104, Method: Composition-based stats.
Identities = 122/397 (30%), Positives = 189/397 (47%), Gaps = 52/397 (13%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+FD+ LP RIA P+ PRD+ +L+V+H I D+ ++ D IV
Sbjct: 4 RTDDFDYVLPQERIAQHPIEPRDACKLLVLHRTTG---EIEHRHFRDIADYMQEGDLIVA 60
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP-----NSWSVYARPSKVIKKGDILH 116
N T+V+ A+L G++ L R + W P K +K G +
Sbjct: 61 NKTRVLPARLVGLKHGGS----AACETLLLKRREDLDPMGSVWECLVNPGKRLKLGACID 116
Query: 117 FFSQDGQSRLEATVIDKWN--------TGEILLVF-SISGIELERQISLVGTIPLPPYIA 167
+ + + A V+ + G L+ F G+ L+ I G +PLPPYI
Sbjct: 117 YRAGGLHAPATADVVLRAEIMDYLENNRGGRLVKFTPAQGLSLDEAIHQAGHVPLPPYIT 176
Query: 168 RKRPIDARDYVDYQTTYA-KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGT 226
D YQT Y+ K + S A+PTAGLHFT L+ R+ G++ V L VG T
Sbjct: 177 NYEG----DPEKYQTVYSMKEEHSAASPTAGLHFTPELIERIKQKGVQWKTVELEVGIDT 232
Query: 227 FMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA------- 279
F V+ +D H+MH+E + A+++ K+ G +++++GTTS+R LE+A
Sbjct: 233 FRLVEEDDPTQHVMHTERYHVSQDVVDAVHATKAAGHKVIAIGTTSVRSLESAFDCNATC 292
Query: 280 -----------TTEDGIINPWSGF--------TNIFITPGYRFRAVDILMSNFHLPKSTL 320
+D + G T+++I PGY + VD +++NFH+P+STL
Sbjct: 293 SEPALCALNFEHAQDSCLLTHRGDIVKRENATTDLYIMPGYTWHVVDCMVTNFHVPRSTL 352
Query: 321 LMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+M+VS+F E K YQ AI H YRF S+GD ++
Sbjct: 353 MMMVSSFASRELIMKAYQEAIEHEYRFLSFGDAMIML 389
>gi|303325841|ref|ZP_07356284.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Desulfovibrio sp. 3_1_syn3]
gi|302863757|gb|EFL86688.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Desulfovibrio sp. 3_1_syn3]
Length = 376
Score = 381 bits (980), Expect = e-104, Method: Composition-based stats.
Identities = 135/379 (35%), Positives = 194/379 (51%), Gaps = 38/379 (10%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPN--LSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + FDLPP +IA P R ++RL+V+ + + DLP L N I+
Sbjct: 10 LSSYRFDLPPEQIAQFPPEERGASRLLVLPRKGASDPRPELRHGMFGDLPDCLPENALII 69
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLH-------MRVSPN--------------SW 99
NN++V+ A+L G R ++ L R P+
Sbjct: 70 ANNSRVLQARLLGSR-----GTGGKVEFLLLTPLPLVMERARPDKRLGGAGGAEAFSAEA 124
Query: 100 SVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGT 159
R +++G+ F + + TV++ G+ + + G +L + + G
Sbjct: 125 EGLVRCGGSVREGETFAFGAG-----ISVTVLESGPFGQRRVRLAWQG-DLAKAFAATGH 178
Query: 160 IPLPPYIARKRPIDARDYVDYQTTYAK--IQGSVAAPTAGLHFTSNLLSRLISIGIKVYF 217
IPLPPYI KR D YQT YA+ GSVAAPTAGLHFT + +L G +
Sbjct: 179 IPLPPYI--KRADGEEDLSRYQTVYARSDKTGSVAAPTAGLHFTPAMREKLADRGFEWAE 236
Query: 218 VTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE 277
VTL+VG GTF PV+ ED H MH E + TA A+ K++G +V+VGTTS+R LE
Sbjct: 237 VTLYVGYGTFSPVRCEDIRSHRMHREYVEVPEATAAAIARAKAQGRPVVAVGTTSVRTLE 296
Query: 278 TATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMY 337
G + P++G+T+IF+ PG FR VD +++NFHLP+S+LLMLVSAF G E Y
Sbjct: 297 GVAELCGRVQPYTGWTDIFLYPGRSFRVVDAVLTNFHLPESSLLMLVSAFAGRERMLAAY 356
Query: 338 QHAISHAYRFYSYGDTSLL 356
A++ YRF+SYGD L+
Sbjct: 357 AEAVTRGYRFFSYGDAMLI 375
>gi|196234303|ref|ZP_03133133.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Chthoniobacter flavus Ellin428]
gi|196221657|gb|EDY16197.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Chthoniobacter flavus Ellin428]
Length = 322
Score = 381 bits (980), Expect = e-104, Method: Composition-based stats.
Identities = 128/357 (35%), Positives = 193/357 (54%), Gaps = 36/357 (10%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
++ ++D+ LP IA P+ R+ +R+MV+H I + P FL + D +V
Sbjct: 2 LLTSDYDYSLPDDLIASHPLARREDSRMMVLHR---AEQRIEHRFFREFPGFLRAGDLVV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A++ +I V ++W +P + ++ G +
Sbjct: 59 LNDTRVIPARVFAD--------GGKIELLFLETVREDTWKCLVKPGRKMRLGATVQIRG- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ TV + GE ++ F+ + G +PLPPY A R ++ D Y
Sbjct: 110 -----VTGTVEEILPDGERIIAFTGPVD-----LDAAGELPLPPYFA--RAVEPADSERY 157
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +G+VAAPTAGLHFT +L+++ FVTLHVG GTF PV+V+D H M
Sbjct: 158 QTVFARERGAVAAPTAGLHFTPEILAQV-----PHTFVTLHVGVGTFRPVQVDDLTQHRM 212
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE I +A+A+N+ + R+V++GTT+ R+LE+ + ++ T+IFI P
Sbjct: 213 HSERFRISEESARAINAAQ----RLVAIGTTTARVLES---QGLPVSACESSTDIFIYPP 265
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+ RAV L++NFHLPKSTLLMLVSA G E + Y AI+ YRFYSYGD L+
Sbjct: 266 YQPRAVGALLTNFHLPKSTLLMLVSALAGREFVLRAYAEAIAQRYRFYSYGDCMLIL 322
>gi|317051041|ref|YP_004112157.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfurispirillum indicum S5]
gi|316946125|gb|ADU65601.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfurispirillum indicum S5]
Length = 339
Score = 381 bits (979), Expect = e-103, Method: Composition-based stats.
Identities = 136/354 (38%), Positives = 201/354 (56%), Gaps = 21/354 (5%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
++ D+P IA P+ RD++RL+V+ L P ++ + S L +L D +VFN+T
Sbjct: 7 DYHVDIPAELIAQEPLAQRDASRLLVLSRAL-APAIVGESTFSRLSEYLRPGDLLVFNDT 65
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQS 124
+VI A+L G + + L +P W V R K + G ++H
Sbjct: 66 RVIPARLKGRK-----STGGAVEIFLVEPCAPRCWRVLTR-GKKLVPGTLVHIGDG---- 115
Query: 125 RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTY 184
+EA VI++ + + FS+ ++++ G IPLPPYI KR D+RD YQ+ +
Sbjct: 116 -VEA-VIEERDGEMAVARFSVD----DQELFACGAIPLPPYI--KREADSRDNQRYQSVF 167
Query: 185 AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEI 244
A G+VAAPTA LHFTS ++ L G++ +TLHVG GTF+PVK E D+H MHSE
Sbjct: 168 AARDGAVAAPTASLHFTSAIVEGLRQRGVRTATITLHVGLGTFLPVKSERIDEHRMHSEH 227
Query: 245 GFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFR 304
+ A T + + GGR+++VGTT +R LE+ + G T+IFI PGY F
Sbjct: 228 FHVPAQTLDLVADTRRSGGRVIAVGTTVVRALESCFGHT-PLRTG-GSTDIFIRPGYSFA 285
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+D +++NFHLP STL++LVSAF G E +++YQ+A+S YRF+SYGD L
Sbjct: 286 VIDGMVTNFHLPDSTLILLVSAFYGRENIQQIYQYAVSQRYRFFSYGDGMLFLP 339
>gi|325854969|ref|ZP_08171685.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella denticola CRIS 18C-A]
gi|327313347|ref|YP_004328784.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella denticola F0289]
gi|325483947|gb|EGC86887.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella denticola CRIS 18C-A]
gi|326946042|gb|AEA21927.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella denticola F0289]
Length = 394
Score = 380 bits (977), Expect = e-103, Method: Composition-based stats.
Identities = 123/400 (30%), Positives = 191/400 (47%), Gaps = 49/400 (12%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVHPNLS------ 36
M + +F F+LP ++AL P V RD RLMV+H
Sbjct: 1 MKLSQFKFNLPKEQVALYPHSSDRVLTRSDGSTQTFTVTRRDEGRLMVLHRTSGKIDMFK 60
Query: 37 -----CPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLH 91
P D+ ++ + DA +FN+TKV A+L G + + + +I L
Sbjct: 61 GEVKGEPKETDFIRFKDVLSYFDEGDAFIFNDTKVFPARLYGTK----EKTDAKIEVFLL 116
Query: 92 MRVSP--NSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGI- 148
++ W V P++ I+ G+ L F D + A VID + L F
Sbjct: 117 RELNQEMRLWDVLVEPARKIRIGNKLFF---DESGTMVAEVIDNTTSRGRTLRFLYDCPH 173
Query: 149 -ELERQISLVGTIPLPPYIARKRPID---------ARDYVDYQTTYAKIQGSVAAPTAGL 198
E +R++ +G PLP YI RP + A D ++Q+ +AK +G+V+AP +
Sbjct: 174 DEFKRELYALGEAPLPRYIIDNRPKEKGEEFAHATADDMENFQSVFAKNEGAVSAPGTNI 233
Query: 199 HFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSV 258
HF+ +++ + GIK F+TLH G GTF ++VED H M SE I+A + NS
Sbjct: 234 HFSEHMMKMMDIRGIKKAFITLHCGLGTFHDIEVEDLTKHKMDSEEMHINADACRIANSA 293
Query: 259 KSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKS 318
K G + +VG + ++ ETA DG++ + G+TN FI P Y F D ++ NF+ P S
Sbjct: 294 KQAGHHLCAVGASVVKATETAVGTDGMLKEYDGWTNEFIFPPYNFGFADSMLVNFYHPYS 353
Query: 319 TLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
TLLM +AF G + + Y A+ + Y F +GD+ L+
Sbjct: 354 TLLMETAAFGGYDLVMEAYDKAVKNGYMFGCFGDSLLILN 393
>gi|206896247|ref|YP_002247231.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Coprothermobacter proteolyticus DSM 5265]
gi|206738864|gb|ACI17942.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Coprothermobacter proteolyticus DSM 5265]
Length = 343
Score = 380 bits (977), Expect = e-103, Method: Composition-based stats.
Identities = 127/351 (36%), Positives = 191/351 (54%), Gaps = 19/351 (5%)
Query: 7 DFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKV 66
+++LP IA + PRD+ RL+VVH + + D + ++ D +V NNTKV
Sbjct: 12 NYELPKHLIAQKLSDPRDACRLLVVHRDTGT---LEDKRFYQIKDYVKPGDVLVLNNTKV 68
Query: 67 ITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRL 126
+ A++ G R + + L + N W +P + IK G++L L
Sbjct: 69 LKARIKGRR-----KTGGAVEILLVRPLRDNVWECLLKPLRKIKIGEVLLLNGGAEVKLL 123
Query: 127 EATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAK 186
E T ++ +S EL+ + G +P PPYI RK P + YQT +A
Sbjct: 124 ERT------ERTAIIELGMSAQELDSYLDDWGEVPTPPYIRRKVPAEE-----YQTVFAS 172
Query: 187 IQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGF 246
G+VAAPTAGLHFT NLL L ++G+K+ +VTLHV GTF + + + +H E F
Sbjct: 173 KPGAVAAPTAGLHFTENLLQDLKNMGVKISYVTLHVALGTFESLASDWQEKSELHQETFF 232
Query: 247 IDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAV 306
+ A T + +N K G + +VGTT +R LE+A +DG +N T++FI PGY ++ V
Sbjct: 233 VSAETTKTVNEAKESGHSVFAVGTTVVRSLESAACDDGKLNSVFSDTSLFIKPGYSWKVV 292
Query: 307 DILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
D L++NFHLP+++LL+LVS+F + K Y+HAI Y+FYS GD L+
Sbjct: 293 DKLVTNFHLPQTSLLLLVSSFATPDLILKAYRHAIEEEYKFYSLGDAMLIL 343
>gi|329850831|ref|ZP_08265676.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Asticcacaulis biprosthecum C19]
gi|328841146|gb|EGF90717.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Asticcacaulis biprosthecum C19]
Length = 356
Score = 380 bits (977), Expect = e-103, Method: Composition-based stats.
Identities = 165/342 (48%), Positives = 218/342 (63%), Gaps = 9/342 (2%)
Query: 15 IALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGV 74
IALRP PR+SARL+ + ++D V D+ AFL S D +V N+TKV+ AQL+G+
Sbjct: 15 IALRPAEPRESARLLRIDAQGG----LTDARVGDIAAFLKSGDLLVVNDTKVLPAQLHGI 70
Query: 75 RFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKW 134
R + + I TL W + +P + ++ GD LHF S +L+ATV K
Sbjct: 71 R--RRDGADVAIEATLIKATGATQWQAFLKPGRKVRIGDDLHFGS---DIKLQATVAAKA 125
Query: 135 NTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAP 194
G L F + L ++ ++G +PLPPYI KR D +D DYQT +A +GSVAAP
Sbjct: 126 EDGRYTLDFHHTPEVLVERLHVIGAMPLPPYIRSKRREDDQDKRDYQTVFANEEGSVAAP 185
Query: 195 TAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQA 254
TAGLHFTS LL L S G+ + +TLHVGAGTF+P+KVEDT DHIMH+E+G I A +A
Sbjct: 186 TAGLHFTSQLLEVLQSQGVGIERITLHVGAGTFLPMKVEDTRDHIMHAELGVISAESAAR 245
Query: 255 LNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFH 314
+N+ + GGRIV VGTTSLRLLE+A G I+ ++ T IFITPG R+ D++++NFH
Sbjct: 246 INAARIAGGRIVCVGTTSLRLLESACDPQGTIHAFASETAIFITPGVVVRSCDLVLTNFH 305
Query: 315 LPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
LPKSTL MLVSA G + K Y+HAI YRF+SYGD L+
Sbjct: 306 LPKSTLFMLVSALAGTDTMKAAYRHAIETGYRFFSYGDACLI 347
>gi|108804168|ref|YP_644105.1| queuosine biosynthesis protein [Rubrobacter xylanophilus DSM 9941]
gi|122381818|sp|Q1AWD5|QUEA_RUBXD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|108765411|gb|ABG04293.1| Queuosine biosynthesis protein [Rubrobacter xylanophilus DSM 9941]
Length = 334
Score = 380 bits (977), Expect = e-103, Method: Composition-based stats.
Identities = 135/357 (37%), Positives = 183/357 (51%), Gaps = 30/357 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M E D++LP IA RP PRD++RLMVV IS H+ +LP FL D +V
Sbjct: 1 MRTDELDYELPQELIAQRPAEPRDASRLMVVDVPSRG---ISHHVFRELPRFLGPGDVLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKVI A+L R E+ +W ARPS+ ++ G L
Sbjct: 58 LNETKVIPARLFASRP-----GGGEVELLFLGERG-GAWEALARPSRRLRPGMPLSAGEG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ V+++ G L+ G ++ + G +PLPPYI Y
Sbjct: 112 E-----RLEVVEELGEGRWLVR----GRDVPGLLERAGRMPLPPYI----EPTPEAEASY 158
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ GS AAPTAG HFT +L + G ++ V LHVG GTF PV+ E +DH M
Sbjct: 159 QTVYARTPGSAAAPTAGFHFTGRVLRGVEEAGARIARVVLHVGLGTFAPVREERLEDHRM 218
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E + TA+A+ R+V+VGTT +R LE+ G + +FI PG
Sbjct: 219 HREYYAVPEETARAVEEA----ERVVAVGTTVVRTLESWARSGVR----EGESELFIYPG 270
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y +RAVD L++NFHLP+STLL LV +F G E ++ Y+ A+ YRFYS+GD LL
Sbjct: 271 YEWRAVDALITNFHLPRSTLLALVMSFAGRELVREAYEVAVRERYRFYSFGDAMLLL 327
>gi|303249320|ref|ZP_07335551.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfovibrio fructosovorans JJ]
gi|302489288|gb|EFL49247.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfovibrio fructosovorans JJ]
Length = 375
Score = 380 bits (976), Expect = e-103, Method: Composition-based stats.
Identities = 136/366 (37%), Positives = 191/366 (52%), Gaps = 21/366 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ + FDLPP RIA RP RD+ +LM V ++D + SDLP L + +V
Sbjct: 21 LLASYHFDLPPERIASRPCEKRDACKLMTVSRATGA---VADAVFSDLPDLLPAGALLVV 77
Query: 62 NNTKVITAQLNGVRFCHINRR---EKEISCTLHMRVSPNSWSV-----YARPSKVIKKGD 113
NNTKV +L G + ++ W+V R S+ K GD
Sbjct: 78 NNTKVAPVRLFGHKPSGGAAELLLTTPVALLAPTVDPDTGWAVAPASGLLRVSRPPKPGD 137
Query: 114 ILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
+ F L T + G + G L +S +G +PLPPYI +R D
Sbjct: 138 RVDFAPD-----LRLTTTRRGQFGRTDFILHWQG-SLPDILSRIGHVPLPPYI--RRADD 189
Query: 174 ARDYVDYQTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK 231
A D YQT YA+ GS AAPTAGLHFT LL+RL G + VT HVG GTF PV+
Sbjct: 190 ADDRKTYQTVYARDDKLGSAAAPTAGLHFTEGLLTRLRERGFGLAAVTCHVGIGTFSPVR 249
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSG 291
V+D DH MH E + A+A+ K+ G +V+VGTT+ R LE E G + ++G
Sbjct: 250 VDDIRDHAMHKEWIEVPGEAAEAVRRAKAEGRPVVAVGTTAARTLEGVVREAGEMTAFAG 309
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T+IFI PG+ F+ VD +++NFHLP S+L+++++A G + Y A++ YRF+SYG
Sbjct: 310 ETDIFIRPGHAFKMVDGMVTNFHLPGSSLVIMLAALVGRQPLLAAYARAVASGYRFFSYG 369
Query: 352 DTSLLF 357
D L+
Sbjct: 370 DAMLVL 375
>gi|110597960|ref|ZP_01386241.1| Queuosine biosynthesis protein [Chlorobium ferrooxidans DSM 13031]
gi|110340409|gb|EAT58898.1| Queuosine biosynthesis protein [Chlorobium ferrooxidans DSM 13031]
Length = 347
Score = 380 bits (976), Expect = e-103, Method: Composition-based stats.
Identities = 133/365 (36%), Positives = 189/365 (51%), Gaps = 26/365 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+DLP +IA P R S R++V+ + + L +L D +V
Sbjct: 1 MRASDFDYDLPEEKIACYPPEERGSTRMLVLDRASGA---LRHAWYAALDEYLEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKV+ A+L+ ++ + +I L + + V R +KKGD L + +
Sbjct: 58 LNNTKVVRARLHALK-----QTGAKIELMLLEKHQADQDRVLYR--GKLKKGDTLVAYDK 110
Query: 121 DGQSRLEATVIDKWNTG--EILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
E V D + G I + G +P+PPY+ KR + D
Sbjct: 111 ------ELLVSDIVDDGVARIEFRGGSQSGSIRDFFERFGAVPIPPYL--KRDAEEVDRE 162
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT +A++ GSVAAPTA L+ T LL + G+ V VTLHVG GTF+P++VE +H
Sbjct: 163 RYQTVFAELPGSVAAPTASLNMTPELLENIRLKGVDVVTVTLHVGLGTFLPIRVESLREH 222
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE------DGIINPWSGF 292
+MH E I A T + + VK+ GGRIV+VGTT R LE A P +G
Sbjct: 223 VMHREYYSISAETVEKIRKVKAAGGRIVAVGTTVTRALEHAAGRIVRSSCRAGDAPITGE 282
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IFI PGY F+ +D L++NFH P+ST+LML +AF G E K+ YQ A+ Y F SYGD
Sbjct: 283 ADIFIFPGYSFQVIDALLTNFHAPRSTVLMLTAAFAGAEHLKRAYQSALEEGYFFLSYGD 342
Query: 353 TSLLF 357
+ L+
Sbjct: 343 SMLII 347
>gi|320104844|ref|YP_004180435.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase [Isosphaera
pallida ATCC 43644]
gi|319752126|gb|ADV63886.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase [Isosphaera
pallida ATCC 43644]
Length = 375
Score = 380 bits (976), Expect = e-103, Method: Composition-based stats.
Identities = 140/379 (36%), Positives = 194/379 (51%), Gaps = 28/379 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + EFDF+LPP RIA P RD ARLMVV ++ H +LP L S D +V
Sbjct: 1 MHISEFDFELPPDRIAQYPAERRDHARLMVVDRRAGT---MTHHRFYELPDLLTSGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N +KV+ A+L G R R E + + S W + A+ + G+ + +
Sbjct: 58 RNTSKVVPARLLGRREATGGRWEG-LFVRAEVDASGLVWELLAQTRGHPRPGEWIVINRR 116
Query: 121 DG-----------QSRLEATVIDKWNTGEILLVFSI------SGIELERQISLVGTIPLP 163
L ++ + G + + + G +PLP
Sbjct: 117 SDLELPTGSTDHEHEGLRLQLVGRGPGGTWKARLHLPDGPATDPDSVWTLLERFGEVPLP 176
Query: 164 PYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVG 223
PYI R D YQTTYA+ GSVAAPTAGLHFT L L G+ V +TLHVG
Sbjct: 177 PYIRHGREGT-GDRDRYQTTYAQTPGSVAAPTAGLHFTPELFETLERRGVGVADLTLHVG 235
Query: 224 AGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT--- 280
GTF P+ VE + H MH+E + TA+ LN ++RGGRIV+VGTTS R LE
Sbjct: 236 IGTFRPLNVETIEAHHMHAETAHLPLATARRLNECRARGGRIVAVGTTSARTLEHVAHQV 295
Query: 281 -TEDGII--NPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMY 337
T+ G + + G +++I PG+ F +D L++NFHLP+S+L++LVSA G+E + Y
Sbjct: 296 VTKTGTVGFESFEGDVDLYIKPGHEFLGLDALITNFHLPRSSLIVLVSALAGVELIRDAY 355
Query: 338 QHAISHAYRFYSYGDTSLL 356
+ AI+ YRFYSYGD +
Sbjct: 356 RVAIAEGYRFYSYGDAMFI 374
>gi|262371071|ref|ZP_06064393.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter johnsonii SH046]
gi|262313957|gb|EEY95002.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter johnsonii SH046]
Length = 346
Score = 379 bits (974), Expect = e-103, Method: Composition-based stats.
Identities = 134/359 (37%), Positives = 193/359 (53%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F+FDLP IA P+ R ++RL+ + D +D+ L++ D +V
Sbjct: 1 MQLSDFNFDLPDELIARYPLDTRSASRLLHLD----AQGQHHDFQFTDILDLLDTGDLLV 56
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G R + + + + S K G L
Sbjct: 57 LNDTKVMKARLKGKRAS-----GGAVEVLVERMQDAFIAHCHIKASNTPKAGAELFI--- 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G ++ TV+ + L + S L + L G +P+PPY R+ +A D Y
Sbjct: 109 -GPDAVKVTVLGRHEN---LFIVEFSQPIL-TVLDLYGQLPIPPYFNRE--AEAIDTERY 161
Query: 181 QTTYAK--IQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
QT + SVAAPTA LHF LL +L + GI+ FVTLHVGAGTF+PV+ D +H
Sbjct: 162 QTVFNDPTKLASVAAPTASLHFDQKLLDQLEAKGIQKTFVTLHVGAGTFLPVRTNDIANH 221
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIFI 297
IMHSE + + + K+RG +++SVGTT+ R +E+A DG + W+G T IFI
Sbjct: 222 IMHSEWCDVPEHAVELIRQTKARGNKVISVGTTATRAVESAAQAHDGELKAWTGDTQIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY F+ VD L++NFHLP+STLLMLVSA + YQHA+++ YRF+SYGD L+
Sbjct: 282 YPGYEFKVVDRLITNFHLPESTLLMLVSALSNRDNILAAYQHAVANQYRFFSYGDAMLV 340
>gi|261879604|ref|ZP_06006031.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
bergensis DSM 17361]
gi|270333753|gb|EFA44539.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
bergensis DSM 17361]
Length = 397
Score = 379 bits (973), Expect = e-103, Method: Composition-based stats.
Identities = 116/400 (29%), Positives = 183/400 (45%), Gaps = 49/400 (12%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVHPNLSCPLVIS 42
M + +F F LP +AL P V RD +RLMV+H +
Sbjct: 1 MKLSQFKFKLPEELVALYPHSFMREFTNDDGTKGSIRVTRRDESRLMVLHRTTGEIEMYR 60
Query: 43 DHL-----------VSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLH 91
+L + + +D + N+TKV A+L G + + E +
Sbjct: 61 KDAKGNPIEGEYLDFRNLLDYFDEHDTFILNDTKVFPARLYGTKEKTDAKIE--VFILRE 118
Query: 92 MRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEI--LLVFSISGIE 149
+ + W V P++ I+ G+ L F D + A V D + ++ S +
Sbjct: 119 LNRETHLWDVLVEPARKIRIGNKLFF---DEVGTMVAEVYDNTTSRGRSLRFLYDCSHEQ 175
Query: 150 LERQISLVGTIPLPPYIARKRPIDAR-------------DYVDYQTTYAKIQGSVAAPTA 196
+ +G +PLP YI RP D +Q YAK +G+V AP
Sbjct: 176 FREDLFALGEMPLPTYILNGRPEHPEMKGMHVRSRALPEDSEYFQCVYAKNEGAVTAPAT 235
Query: 197 GLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALN 256
GLHF+ L+ R+ GI F+TLH G G F P++VED H M SE I +N
Sbjct: 236 GLHFSRELMKRMEIKGIHTAFITLHCGLGNFTPIEVEDLTKHKMDSEQMIITKKACDIVN 295
Query: 257 SVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLP 316
+ G R+ ++GT+ L+ ETA DG++ ++G+T+ FI P Y F D +++NF+ P
Sbjct: 296 RTRKEGHRLCAIGTSVLKATETAVGTDGMLKEYNGWTSKFIFPKYDFGLADSMVANFYHP 355
Query: 317 KSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ST++M +AF G E+ + Y A+ H Y+F +GD+ L+
Sbjct: 356 ESTMVMATAAFGGYEKVMECYDLAVKHGYKFGCFGDSLLI 395
>gi|307565541|ref|ZP_07628021.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella amnii CRIS 21A-A]
gi|307345700|gb|EFN91057.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella amnii CRIS 21A-A]
Length = 394
Score = 379 bits (973), Expect = e-103, Method: Composition-based stats.
Identities = 119/399 (29%), Positives = 189/399 (47%), Gaps = 49/399 (12%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVHPNLSCPLVI- 41
M + +F F LP ++AL P V RD RLMVVH +
Sbjct: 1 MKLSQFKFSLPEDQVALYPHSSERILKRADGSEQKFTVVRRDEGRLMVVHRKSGKIDMFK 60
Query: 42 ---------SDH-LVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLH 91
D+ D+ + + DA +FN+TKV A+L G + + + +I L
Sbjct: 61 GEVTGEPKEEDYIRFRDVLNYFDDGDAFIFNDTKVFPARLYGTK----EKTDAKIEVFLL 116
Query: 92 MRVSPN--SWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLV--FSISG 147
++ + W V P++ I+ G+ L F D + A VID + L +
Sbjct: 117 RELNADMRLWDVLVEPARKIRIGNKLFF---DESGTMVAEVIDNTTSRGRTLRFLYDCDH 173
Query: 148 IELERQISLVGTIPLPPYIARKRP---------IDARDYVDYQTTYAKIQGSVAAPTAGL 198
E +R++ +G PLP YI RP D +Q+ +AK +G+V+AP +
Sbjct: 174 DEFKRELFSLGEAPLPRYIIDNRPKKEGEDFAHATEDDLEYFQSVFAKNEGAVSAPGTNI 233
Query: 199 HFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSV 258
HF+ +++ + GIK F+TLH G+F ++VED H M SE I+A +NS
Sbjct: 234 HFSEHMMKMMEIKGIKSAFITLHCALGSFHDIEVEDLTKHKMDSEEMHINAEACAVVNST 293
Query: 259 KSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKS 318
K G ++ +VG + ++ ETA DG++ + G+TN FI P Y+F D ++ NF+ P S
Sbjct: 294 KKDGHKVCAVGASVVKACETAVGTDGLLKEYDGWTNKFIFPPYKFGLADSMLVNFYHPYS 353
Query: 319 TLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
LLM +AF G + + Y A+ + Y F +GD+ L+
Sbjct: 354 VLLMETAAFGGYDLIMQAYDLAVKNGYMFGCFGDSMLIL 392
>gi|302345240|ref|YP_003813593.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella melaninogenica ATCC 25845]
gi|302149702|gb|ADK95964.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella melaninogenica ATCC 25845]
Length = 394
Score = 378 bits (972), Expect = e-103, Method: Composition-based stats.
Identities = 121/400 (30%), Positives = 189/400 (47%), Gaps = 49/400 (12%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVHPNLSCPLVI- 41
M + +F F+LP ++AL P V RD RLMV+H +
Sbjct: 1 MKLSQFKFNLPKEQVALYPHSSERVLTRTDGSTQTFTVTRRDEGRLMVLHRKSGKIDMFK 60
Query: 42 ---------SDH-LVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLH 91
D+ D+ + + DA +FN+TKV A+L G + + + +I L
Sbjct: 61 GEINGEPKEEDYIRFKDVFNYFDEGDAFIFNDTKVFPARLYGTK----EKTDAKIEVFLL 116
Query: 92 MRVSP--NSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGI- 148
++ W V P++ I+ G+ L F D + A VID + L F
Sbjct: 117 RELNQEMRLWDVLVEPARKIRIGNKLFF---DESGTMVAEVIDNTTSRGRTLRFLYDCPH 173
Query: 149 -ELERQISLVGTIPLPPYIARKRPIDA---------RDYVDYQTTYAKIQGSVAAPTAGL 198
E +R++ +G PLP YI RP + D +Q+ +AK +G+V+AP +
Sbjct: 174 DEFKRELFALGEAPLPRYIIDNRPKEDGEEFAHATADDMEHFQSVFAKNEGAVSAPGTNI 233
Query: 199 HFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSV 258
HF+ +++ + GIK F+TLH G G F ++VED H M SE I+A + N
Sbjct: 234 HFSEHMMKMMDIKGIKKAFITLHCGLGNFHDIEVEDLTKHKMDSEEMHINADACRIANGA 293
Query: 259 KSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKS 318
K G R+ +VG + ++ ETA DG++ + G+TN FI P Y F D ++ NF+ P S
Sbjct: 294 KQAGHRLCAVGASVVKATETAVGTDGMLKEYDGWTNEFIFPPYNFGFADSMLVNFYHPYS 353
Query: 319 TLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
TLLM +AF G + + Y A+ + Y F +GD+ L+
Sbjct: 354 TLLMETAAFGGYDLVMEAYDKAVKNGYMFGCFGDSLLILN 393
>gi|317155024|ref|YP_004123072.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfovibrio aespoeensis Aspo-2]
gi|316945275|gb|ADU64326.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfovibrio aespoeensis Aspo-2]
Length = 364
Score = 378 bits (971), Expect = e-103, Method: Composition-based stats.
Identities = 127/372 (34%), Positives = 189/372 (50%), Gaps = 33/372 (8%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ + + LP RIA P RD +RL+V+ + + L L + +V
Sbjct: 8 RLSSYHYTLPEERIAQTPADRRDGSRLLVLDR---AGESLRAASFASLMDHLPPDALLVA 64
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRV----------SPNSWSV-----YARPS 106
NN++VI A++ G + + + + + W R S
Sbjct: 65 NNSRVIPARVFGTK-----DTGGRVEFLMLTPLPLMEPQEGTGALTGWRTARAEGLLRAS 119
Query: 107 KVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYI 166
K K G ++ F + T ++ G + + G +L+ + +G +PLPPYI
Sbjct: 120 KSPKPGAMVTFADD-----FQLTALEGGPFGRWQVELAWRG-DLKDRFEALGHLPLPPYI 173
Query: 167 ARKRPIDARDYVDYQTTYAK--IQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
RP D YQTTY+ GSVAAPTAGLHFTS+L S L + G +TL+VG
Sbjct: 174 H--RPDSEADRERYQTTYSDTAKAGSVAAPTAGLHFTSDLRSGLAARGFGWAEITLYVGY 231
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDG 284
GTF PV+ D +H MHSE + TA A+ K+ G +V+VGTTS R LE E G
Sbjct: 232 GTFSPVRCADIREHRMHSEYIEVPEATALAVQQAKAEGRPVVAVGTTSARSLEGMVRESG 291
Query: 285 IINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHA 344
I + G T+IFITPGYRF+ VD +++NFHLP+S+L+++++A G + Y A+ +
Sbjct: 292 RIGEFRGETDIFITPGYRFQVVDAMITNFHLPESSLIIMIAALAGRKTVLSAYDFALENG 351
Query: 345 YRFYSYGDTSLL 356
+RF+SYGD L+
Sbjct: 352 FRFFSYGDAMLI 363
>gi|288926585|ref|ZP_06420502.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
buccae D17]
gi|288336662|gb|EFC75031.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
buccae D17]
Length = 393
Score = 378 bits (971), Expect = e-103, Method: Composition-based stats.
Identities = 123/398 (30%), Positives = 184/398 (46%), Gaps = 48/398 (12%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVHPNLSCPLVIS 42
M + +F F L +IAL P V R+ +RLMV+H +
Sbjct: 1 MKLSQFKFKLSEEQIALYPHTAEHVITRKDGTQSTFHVTRREESRLMVLHKKSERIDMYK 60
Query: 43 DH----------------LVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEI 86
D+ + D +FN+TKV A+L G + + + +I
Sbjct: 61 TDETGEPLKDAEGRPQYIQFRDIVDYFGDGDTFIFNDTKVFPARLYGTK----EKTDAKI 116
Query: 87 SCTLHMRVSP--NSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFS 144
L ++ W V P++ I+ G+ L F D S + A VID + L F
Sbjct: 117 EVFLLRELNEEMRLWDVLVEPARKIRIGNKLFF---DDTSTMVAEVIDNTTSRGRTLRFL 173
Query: 145 IS--GIELERQISLVGTIPLPPYIARKRP---IDARDYVDYQTTYAKIQGSVAAPTAGLH 199
E ++ + +G PLP YI +R D D+QT +AK +G+V AP GLH
Sbjct: 174 YDSSHDEFKQNLYALGESPLPRYIIDRRESHHATPEDMDDFQTVFAKNEGAVTAPATGLH 233
Query: 200 FTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVK 259
F+ LL R+ GI ++TLH G G F ++VED H M SE I A + +N K
Sbjct: 234 FSRELLKRMEIYGINFAYITLHCGLGNFHDIEVEDLTKHKMDSEQMKISAEACKVVNEAK 293
Query: 260 SRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKST 319
G I +VGT+ ++ ETA DG++ + G+TN FI P Y F D +++NF+ P ST
Sbjct: 294 RAGNHICAVGTSVVKATETAVGTDGMLKEFDGWTNKFIFPPYDFGLADCMVANFYHPLST 353
Query: 320 LLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
LLM +AF G + + Y A + Y+F +GD+ L+
Sbjct: 354 LLMSTAAFGGYDMVMECYNRAAADGYKFGCFGDSLLIL 391
>gi|302036375|ref|YP_003796697.1| s-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Nitrospira defluvii]
gi|300604439|emb|CBK40771.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Nitrospira defluvii]
Length = 346
Score = 378 bits (971), Expect = e-103, Method: Composition-based stats.
Identities = 136/356 (38%), Positives = 194/356 (54%), Gaps = 18/356 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M++ EFDF P +A PV PRD ARL+V+ L V+DLP+ L S D +V
Sbjct: 1 MLLSEFDFPFDPVLVADHPVIPRDRARLLVLDRQGGERL---HRQVADLPSLLQSGDLVV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKV+ A++ + + + + W V + + G ++ F
Sbjct: 58 VNNTKVMPARV----PAQVRSNGRLLDLLFVEDLGQGLWEVLIK--GRFRPGAVIEFPGG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+E + V + + GT+PLPPYI KR A D Y
Sbjct: 112 GTGEIVE-------RSRLRTTVRVWGVTSVYELMQATGTMPLPPYI--KREPSADDQEWY 162
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ +G++AAPTAGLHFT L+ L GI++ VTLHVG GTF VK E +DH M
Sbjct: 163 QTMFAQHEGAIAAPTAGLHFTRELVQALTGKGIELAEVTLHVGPGTFRSVKTERIEDHRM 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
+E + A T + + V+ RG R+V+VGTT +R LETA I P+ G +FITPG
Sbjct: 223 LAERIEVSAQTVEQIRRVRERGHRVVAVGTTVVRALETAGRGGRGIEPFQGQAELFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ F+ +D +++NFHLP++TLLMLVSAF G++ + Y+ A++ YRFYSYGD L+
Sbjct: 283 FEFQVIDAMVTNFHLPRTTLLMLVSAFVGVQPLRAAYEEAVAERYRFYSYGDAMLI 338
>gi|93006388|ref|YP_580825.1| queuosine biosynthesis protein [Psychrobacter cryohalolentis K5]
gi|122415204|sp|Q1QAG2|QUEA_PSYCK RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|92394066|gb|ABE75341.1| Queuosine biosynthesis protein [Psychrobacter cryohalolentis K5]
Length = 405
Score = 378 bits (971), Expect = e-103, Method: Composition-based stats.
Identities = 139/390 (35%), Positives = 198/390 (50%), Gaps = 48/390 (12%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPL-VISDHLVSDLPAFLNSNDAIVF 61
V ++D++LP IA P+ R +++L+ + N + + D L S+LP LN+ D IVF
Sbjct: 29 VDDYDYELPDQLIARYPLAQRSASKLLYLRANNANSQVEVEDKLFSELPELLNAGDLIVF 88
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHM--------------------------RVS 95
N+TKV+ A+L G + +I +
Sbjct: 89 NDTKVMKARLFGQK-----DTGGKIEVLIERLVALSDLNSADLDTITSNSDIIDMTVIAE 143
Query: 96 PNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQIS 155
+ + + SK +K G L + +I + L + + L +
Sbjct: 144 KHIALCHVKASKALKLGQGLVL----ADGHMTGVMIGRQEN---LFILAFDTPILPD-LE 195
Query: 156 LVGTIPLPPYIARKRPIDARDYVDYQTTYAK--IQGSVAAPTAGLHFTSNLLSRLISIGI 213
L G +P+PPY R DA D YQT + SVAAPTA LHF +L +L + GI
Sbjct: 196 LYGELPIPPYFERH--ADATDNTRYQTVFHDPAKLASVAAPTASLHFDDIVLEKLAAKGI 253
Query: 214 KVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSL 273
+ FVTLHVGAGTF PVK E+ +H MHSE + TA +N + G +++++GTT
Sbjct: 254 QTAFVTLHVGAGTFAPVKTENLLNHTMHSEYAHLPQATADLINQTHANGKQVIAIGTTVT 313
Query: 274 RLLETATTEDGIINP----WSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCG 329
R+LETA + + W+G T IFI PG+ F VD L++NFHLPKSTLLMLVSAF
Sbjct: 314 RVLETAYQQTAVDRQPLSGWAGDTEIFIYPGFEFGVVDKLLTNFHLPKSTLLMLVSAFAT 373
Query: 330 IEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
+ ++ YQHAI YRF+SYGD LL +K
Sbjct: 374 KKSIEEAYQHAIESEYRFFSYGDAMLLDKK 403
>gi|119713610|gb|ABL97661.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [uncultured
marine bacterium EB0_39H12]
Length = 341
Score = 378 bits (970), Expect = e-102, Method: Composition-based stats.
Identities = 130/361 (36%), Positives = 199/361 (55%), Gaps = 23/361 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +++++F+LP + IA P R S+RL++ + D SDL L + D +V
Sbjct: 1 MDIEDYNFELPEALIAKEPKSERSSSRLLI------AEDRLIDKKFSDLIDSLGNGDLLV 54
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV A+L + ++ + ++ N+ + ++ +++ + L
Sbjct: 55 INDTKVFKARLEAQKVS-----GGKVELLIERKIDANNALALTKSNRPLRESERLQVT-- 107
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A +I K G + L+ +++ + GT+PLPPYI RK D D Y
Sbjct: 108 --NTNIFADIIKK--DGYLSLIQFSE--DIDDILDGFGTVPLPPYIDRK--PDDNDEARY 159
Query: 181 QTTYAK--IQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
QT YA SVAAPTAGLHF + LL R+ G+ + +TL++G GTF P+K D H
Sbjct: 160 QTVYADANNMNSVAAPTAGLHFDNELLERIKDKGVNIASITLNIGIGTFKPIKQNDVRKH 219
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
IMHSE ++ A +N RI VGTTSLR LE+ ++ I + G T+IFI
Sbjct: 220 IMHSEKIYLSESNANIINEALLSNSRIFCVGTTSLRCLESIYSKFDEIKSYEGETDIFIY 279
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG++F+ D L++NFHLPK+TLL+LVSAF G++ + Y+HAI YRF+SYGD LL +
Sbjct: 280 PGFKFKVADYLITNFHLPKTTLLLLVSAFSGLDRIQAAYKHAIEKEYRFFSYGDAMLLKR 339
Query: 359 K 359
+
Sbjct: 340 Q 340
>gi|315606288|ref|ZP_07881304.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
buccae ATCC 33574]
gi|315251979|gb|EFU31952.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
buccae ATCC 33574]
Length = 393
Score = 378 bits (970), Expect = e-102, Method: Composition-based stats.
Identities = 123/398 (30%), Positives = 184/398 (46%), Gaps = 48/398 (12%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVHPNLSCPLVIS 42
M + +F F L +IAL P V R+ +RLMV+H +
Sbjct: 1 MKLSQFKFKLSEEQIALYPHTAEHVITRKDGTQSTFHVTRREESRLMVLHKKSERIDMYK 60
Query: 43 DH----------------LVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEI 86
D+ + D +FN+TKV A+L G + + + +I
Sbjct: 61 TDETGEPLKDAEGRPQYIQFRDIVDYFGDGDTFIFNDTKVFPARLYGTK----EKTDAKI 116
Query: 87 SCTLHMRVSP--NSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFS 144
L ++ W V P++ I+ G+ L F D S + A VID + L F
Sbjct: 117 EVFLLRELNEEMRLWDVLVEPARKIRIGNKLFF---DDTSTMVAEVIDNTTSRGRTLRFL 173
Query: 145 IS--GIELERQISLVGTIPLPPYIARKRP---IDARDYVDYQTTYAKIQGSVAAPTAGLH 199
E ++ + +G PLP YI +R D D+QT +AK +G+V AP GLH
Sbjct: 174 YDSPHDEFKQNLYALGESPLPRYIIDRRESHHATPEDMDDFQTVFAKNEGAVTAPATGLH 233
Query: 200 FTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVK 259
F+ LL R+ GI ++TLH G G F ++VED H M SE I A + +N K
Sbjct: 234 FSRELLKRMEIYGINFAYITLHCGLGNFHDIEVEDLTKHKMDSEQMKISAEACKVVNEAK 293
Query: 260 SRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKST 319
G I +VGT+ ++ ETA DG++ + G+TN FI P Y F D +++NF+ P ST
Sbjct: 294 RAGNHICAVGTSVVKATETAVGTDGMLKEFDGWTNKFIFPPYDFGLADCMVANFYHPLST 353
Query: 320 LLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
LLM +AF G + + Y A + Y+F +GD+ L+
Sbjct: 354 LLMSTAAFGGYDMVMECYNRAAADGYKFGCFGDSLLIL 391
>gi|325971231|ref|YP_004247422.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Spirochaeta
sp. Buddy]
gi|324026469|gb|ADY13228.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Spirochaeta
sp. Buddy]
Length = 346
Score = 378 bits (970), Expect = e-102, Method: Composition-based stats.
Identities = 131/357 (36%), Positives = 197/357 (55%), Gaps = 13/357 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +KE+ FDLP IA P+ R RL+V+ + I D ++ ++L +V
Sbjct: 1 MTIKEYSFDLPEHLIAQTPIDRRGEDRLLVLDKHSGT---IIDEQMTHFASYLQEGSILV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN+KV A++ I+ + + +SW+V +K G F +
Sbjct: 58 VNNSKVRKARVFA-----ISETKSRVEFLFLEENLDHSWNVMVTKTKKQHVGKHYTFCTA 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D + G + + + + E +G +PLPPYI R+ D Y
Sbjct: 113 DQSYVRTGCITKANEDGTRTI--TFNHVLDEDFFLKLGHVPLPPYIKREDCF--ADENRY 168
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ +GSVAAPTAGLHFT +L+ + + G + VTLHVG GTF+PV+ ++ +DH M
Sbjct: 169 QTIYAQKEGSVAAPTAGLHFTQEILASIRAKGCTIVPVTLHVGPGTFLPVRTDNLEDHHM 228
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWSGFTNIFITP 299
H E I+ +A+ +N K++G +IV+ GTTS+R LE+A TE G++ G TN+FI P
Sbjct: 229 HYESYEIEEESARIINQAKAQGRKIVATGTTSVRTLESAFNTETGLLESGQGRTNLFIRP 288
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y F+ VD L++NFH P+STLL+LVS F G E+ + Y+HA+ +YRF+SYGD +
Sbjct: 289 PYTFKIVDQLLTNFHTPESTLLVLVSTFAGKEKIDRAYRHAVEQSYRFFSYGDAMFI 345
>gi|298373549|ref|ZP_06983538.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroidetes oral taxon 274 str. F0058]
gi|298274601|gb|EFI16153.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroidetes oral taxon 274 str. F0058]
Length = 351
Score = 377 bits (969), Expect = e-102, Method: Composition-based stats.
Identities = 123/362 (33%), Positives = 183/362 (50%), Gaps = 16/362 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F FDLP IA RD +L+V+H + + D+ ++ + D V
Sbjct: 1 MKLSQFKFDLPEKSIAQYLPKNRDDCKLLVLHKKS---EKVEHKKLIDILSYFDDKDLFV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
FNNT+V A + G++ + E I L ++P W V P++ I+ G+ L+F
Sbjct: 58 FNNTQVFPALMTGIK----EKTEAVIEVFLLRELNPLTKLWDVLVDPARKIRVGNKLYFG 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
L A VID + L F G E ++ + +G LP YI KRP++ D
Sbjct: 114 E---DQSLVAEVIDNTTSRGRTLRFLYDGTHEEFKKALFALGRTSLPAYI--KRPVEDAD 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT +A +G+V AP G+HF+ L+ ++ GI+ F+TLH F + VED
Sbjct: 169 TEAYQTVFASEEGAVVAPFTGIHFSRELMKKMQIKGIEAGFITLHCSLSMFRSIDVEDLQ 228
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H + SE + AQ N + G +I ++GT+ L LETA T G I +SG+TN F
Sbjct: 229 KHKLDSEQMEVKPEFAQLFNKKSAEGRKICAIGTSVLLTLETAATVPGKIKEYSGWTNKF 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y F+ V L+S FHLP ST+LM ++F G + T + Y AI Y+F +GD L+
Sbjct: 289 IFPPYEFQTVGSLLSTFHLPYSTMLMNQASFAGYDLTMQTYNTAIKKGYKFGCFGDLLLI 348
Query: 357 FQ 358
Sbjct: 349 LN 350
>gi|288803047|ref|ZP_06408483.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
melaninogenica D18]
gi|288334564|gb|EFC73003.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
melaninogenica D18]
Length = 394
Score = 377 bits (969), Expect = e-102, Method: Composition-based stats.
Identities = 121/400 (30%), Positives = 189/400 (47%), Gaps = 49/400 (12%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVHPNLSCPLVI- 41
M + +F F+LP ++AL P V RD RLMV+H +
Sbjct: 1 MKLSQFKFNLPKEQVALYPHSSERVLTRTDGSTQTFTVTRRDEGRLMVLHRKSGKIDMFK 60
Query: 42 ---------SDH-LVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLH 91
D+ D+ + + DA +FN+TKV A+L G + + + +I L
Sbjct: 61 GEINGEPKEEDYIRFKDVFNYFDEGDAFIFNDTKVFPARLYGTK----EKTDAKIEVFLL 116
Query: 92 MRVSP--NSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGI- 148
++ W V P++ I+ G+ L F D + A VID + L F
Sbjct: 117 RELNQEMRLWDVLVEPARKIRIGNKLFF---DESGTMVAEVIDNTTSRGRTLRFLYDCPH 173
Query: 149 -ELERQISLVGTIPLPPYIARKRPIDA---------RDYVDYQTTYAKIQGSVAAPTAGL 198
E +R++ +G PLP YI RP + D +Q+ +AK +G+V+AP +
Sbjct: 174 DEFKRELFTLGEAPLPRYIIDNRPKEEGEEFAHATADDMEHFQSVFAKNEGAVSAPGTNI 233
Query: 199 HFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSV 258
HF+ +++ + GIK F+TLH G G F ++VED H M SE I+A + N
Sbjct: 234 HFSEHMMKMMDIKGIKKAFITLHCGLGNFHDIEVEDLTKHKMDSEEMHINADACRIANGA 293
Query: 259 KSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKS 318
K G R+ +VG + ++ ETA DG++ + G+TN FI P Y F D ++ NF+ P S
Sbjct: 294 KQAGHRLCAVGASVVKATETAVGTDGMLKEYDGWTNEFIFPPYNFGFADSMLVNFYHPYS 353
Query: 319 TLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
TLLM +AF G + + Y A+ + Y F +GD+ L+
Sbjct: 354 TLLMETAAFGGYDLVMEAYDKAVKNGYMFGCFGDSLLILN 393
>gi|317503918|ref|ZP_07961926.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
salivae DSM 15606]
gi|315664944|gb|EFV04603.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
salivae DSM 15606]
Length = 388
Score = 377 bits (968), Expect = e-102, Method: Composition-based stats.
Identities = 120/392 (30%), Positives = 183/392 (46%), Gaps = 43/392 (10%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVHPNLSCPLVIS 42
M + +F F+L ++AL P V RD RLMV+H +
Sbjct: 1 MKLSQFKFNLAKEQVALYPHSFTRVFENEDGTKGSFQVTRRDECRLMVLHKRSGQIDMFK 60
Query: 43 DHL-----------VSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLH 91
++ + + D +FN+TKV A+L G + + + +I L
Sbjct: 61 KDADGNPIEGEYLDFRNILDYFDKGDTFIFNDTKVFPARLYGTK----EKTDAKIEVFLL 116
Query: 92 MRVSP--NSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLV--FSISG 147
++ W V P++ I+ G+ L F D + A VID + L +
Sbjct: 117 RELNQEMRLWDVLVEPARKIRIGNKLFF---DETGSMVAEVIDNTTSRGRTLRFLYDCDH 173
Query: 148 IELERQISLVGTIPLPPYIARKRP---IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNL 204
E +R++ +G PLP Y+ R D VD+QT +AK +G+V AP GLHF+ L
Sbjct: 174 EEFKRELFALGEAPLPRYVIDNRTEPHATPDDLVDFQTVFAKKEGAVTAPATGLHFSREL 233
Query: 205 LSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGR 264
+ R+ GI ++TLH G G F ++VED H M SE IDA +N K G
Sbjct: 234 MKRMEIRGIHDAYLTLHCGLGNFNSIEVEDLTKHKMDSEQMVIDAEACAKVNQAKREGHH 293
Query: 265 IVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLV 324
+++VG + ++ ETA DG++ + G+TN FI P Y F D +++NF+ P STLLM
Sbjct: 294 VLAVGVSVVKATETAVGTDGMLKEYDGWTNKFIFPPYDFHLADSMVANFYHPYSTLLMTT 353
Query: 325 SAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+AF G + + Y A + Y F YGD L+
Sbjct: 354 AAFGGYDAVMECYNLASENGYMFGCYGDALLI 385
>gi|281422487|ref|ZP_06253486.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
copri DSM 18205]
gi|281403470|gb|EFB34150.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
copri DSM 18205]
Length = 394
Score = 376 bits (967), Expect = e-102, Method: Composition-based stats.
Identities = 118/400 (29%), Positives = 185/400 (46%), Gaps = 49/400 (12%)
Query: 1 MMVKEFDFDLPPSRIALRP-----------------VFPRDSARLMVVHPNLSCPLVISD 43
M + +F+F LP ++AL P + RD +RLMV+H +
Sbjct: 1 MKLSQFNFKLPKDQVALYPHKAKHVVKTASGERTFEITRRDESRLMVLHKKSETIEMYKK 60
Query: 44 H----------------LVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEIS 87
D+ + D +FNNTKV A+L G + + + +I
Sbjct: 61 DENGKDMVDADGNPVFLQFKDIVNYFEEGDTFIFNNTKVFPARLYGTK----EKTDAKIE 116
Query: 88 CTLHMRVSP--NSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSI 145
L ++P W V P++ I+ G+ L F D + + A VID + L F
Sbjct: 117 VFLLRELNPEMRLWDVLVEPARKIRIGNKLFF---DDVNEMVAEVIDNTTSRGRTLRFLY 173
Query: 146 S----GIELERQISLVGTIPLPPYIARKRPI---DARDYVDYQTTYAKIQGSVAAPTAGL 198
+R + +G PLP Y+ R D D+Q +A+++G+V AP GL
Sbjct: 174 DEDGNHDVFKRSLFALGEAPLPRYVIDAREDHHATEDDMDDFQCVFAEVEGAVTAPATGL 233
Query: 199 HFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSV 258
HF+ L+ R+ GI ++TLH G G F ++VED H M SE I +N
Sbjct: 234 HFSRELMKRMEINGINEAYITLHCGLGNFHDIEVEDLTKHKMDSEQMMISQEACDLVNKT 293
Query: 259 KSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKS 318
K G R+ ++GT+ ++ ETA DG++ + G+TN FI P Y F D ++NF+ P+S
Sbjct: 294 KLAGHRVCAIGTSVMKATETAVGTDGMMKAFDGWTNKFIFPPYDFGLADCAVANFYHPES 353
Query: 319 TLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
TL+M +AF G + + Y+ A+ + Y F YGD+ L+
Sbjct: 354 TLMMSTAAFGGYDLVYEAYKMAVKNGYMFGCYGDSLLMLP 393
>gi|325269367|ref|ZP_08135984.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
multiformis DSM 16608]
gi|324988288|gb|EGC20254.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
multiformis DSM 16608]
Length = 394
Score = 376 bits (967), Expect = e-102, Method: Composition-based stats.
Identities = 122/399 (30%), Positives = 188/399 (47%), Gaps = 49/399 (12%)
Query: 1 MMVKEFDFDLPPSRIALRP------------------VFPRDSARLMVVHPNLS------ 36
M + +F F+LP ++AL P V RD RLM++H
Sbjct: 1 MKLSQFKFNLPKEQVALYPHSSDRVLTRSDGSTQTFTVTRRDEGRLMILHRKSGRIDMFK 60
Query: 37 -----CPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLH 91
P D+ + + DA +FN+TKV A+L G + + + +I L
Sbjct: 61 GDVKGEPKEEDFIRFKDVLDYFDEGDAFIFNDTKVFPARLYGTK----EKTDAKIEVFLL 116
Query: 92 MRVSP--NSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGI- 148
++ W V P++ I+ G+ L F D + A VID + L F
Sbjct: 117 RELNQEMRLWDVLVEPARKIRIGNKLFF---DESGTMVAEVIDNTTSRGRTLRFLYDCPH 173
Query: 149 -ELERQISLVGTIPLPPYIARKRPID---------ARDYVDYQTTYAKIQGSVAAPTAGL 198
E +R++ +G PLP YI RP + A D ++Q+ +AK +G+V+AP +
Sbjct: 174 DEFKRELYALGEAPLPRYIIDNRPKEKGAEFAHASADDMENFQSVFAKNEGAVSAPGTNI 233
Query: 199 HFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSV 258
HF+ ++ + GIK F+TLH G GTF ++VED H M SE I+A + N
Sbjct: 234 HFSEQMMKMMDIRGIKKAFITLHCGLGTFHDIEVEDLTKHKMDSEEMHINADACRIANGA 293
Query: 259 KSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKS 318
K G + +VG + ++ ETA DG++ + G+TN FI P Y F D ++ NF+ P S
Sbjct: 294 KQAGHHLCAVGASVVKATETAVGTDGMMKEYDGWTNEFIFPPYNFGFADSMLVNFYHPYS 353
Query: 319 TLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TLLM +AF G E + Y A+ + Y F +GD+ L+
Sbjct: 354 TLLMETAAFGGYELVMEAYDKAVKNGYMFGCFGDSLLIL 392
>gi|229093489|ref|ZP_04224592.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock3-42]
gi|228689960|gb|EEL43764.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock3-42]
Length = 287
Score = 376 bits (966), Expect = e-102, Method: Composition-based stats.
Identities = 125/291 (42%), Positives = 170/291 (58%), Gaps = 14/291 (4%)
Query: 67 ITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRL 126
+ A+L+GV+ I L + + W +P+K +K+G ++ F G+ +L
Sbjct: 1 MPARLHGVK----EDTGAHIEVLLLKQEEGDKWETLVKPAKRVKEGTVISF----GEGKL 52
Query: 127 EATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAK 186
+AT + G L FS GI + +G +PLPPYI D YQT YAK
Sbjct: 53 KATCTGTADQGGRQLEFSYDGI-FYEILDELGEMPLPPYIKE----TLEDRDRYQTVYAK 107
Query: 187 IQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGF 246
GS AAPTAGLHFT LL +L G+++ F+TLHVG GTF PV + ++H MH+E
Sbjct: 108 EIGSAAAPTAGLHFTEELLEKLKQKGVELAFITLHVGLGTFRPVSADTIEEHHMHAEYYH 167
Query: 247 IDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITPGYRFRA 305
+ TA LN VK GGRI++VGTTS R LET AT DG + SG+T+IF+ PGY F+A
Sbjct: 168 MSEETAALLNRVKENGGRIITVGTTSTRTLETIATDHDGKLCAASGWTDIFMYPGYEFKA 227
Query: 306 VDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+D L++NFHLPKSTL+MLVSAF + Y A+ YRF+S+GD +
Sbjct: 228 IDGLITNFHLPKSTLIMLVSAFANRDNVLHAYNEAVKEKYRFFSFGDAMFV 278
>gi|260654964|ref|ZP_05860452.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Jonquetella
anthropi E3_33 E1]
gi|260630279|gb|EEX48473.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Jonquetella
anthropi E3_33 E1]
Length = 361
Score = 376 bits (965), Expect = e-102, Method: Composition-based stats.
Identities = 129/354 (36%), Positives = 188/354 (53%), Gaps = 18/354 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
V+ + +DLP +IA PV PRDS RLM + + + DL L +D +V N
Sbjct: 25 VQTYQYDLPQEQIAQVPVSPRDSCRLMTLDRRTG---RVGHKVFRDLLDLLRPDDLLVRN 81
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+T+V+ +L G + E+ L + N+W RP + + G +
Sbjct: 82 DTRVLAGRLTGRKISGT----AEVEVLLLRQEKENTWQALVRPGRRLPPGTEVDLQGA-- 135
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
A V + + LV G++++ L G +PLPPYI + + DYQT
Sbjct: 136 ----IAVVGPSISDDGVRLVTFSEGLDVKVWCDLHGQMPLPPYITSRESKND----DYQT 187
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YAK S AAPTAGLHFT LL+ + G+++ VTL VG GTF PV D H+MHS
Sbjct: 188 VYAKDANSAAAPTAGLHFTEGLLAAIREKGVQILDVTLEVGLGTFRPVSEPDIRRHVMHS 247
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E + A T +A+ + KS G R+++VGTT +R LE + + + W T +FI PG+
Sbjct: 248 ERCRVPAATLEAIRAAKSTGRRVIAVGTTVVRTLEGLWSTGKVDDRWF-ETQLFIYPGFH 306
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
++ VD L++NFHLP STL+MLVSAF G E Y+ A++ YRF+S+GD +
Sbjct: 307 YQVVDGLITNFHLPGSTLMMLVSAFGGYEPVMAAYREAVAKGYRFFSFGDAMFI 360
>gi|121603236|ref|YP_980565.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Polaromonas naphthalenivorans CJ2]
gi|120592205|gb|ABM35644.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Polaromonas naphthalenivorans CJ2]
Length = 352
Score = 376 bits (965), Expect = e-102, Method: Composition-based stats.
Identities = 141/362 (38%), Positives = 195/362 (53%), Gaps = 26/362 (7%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +FDF LP IA P R ++RL+ I+D +DLP L D +VFN
Sbjct: 7 LSDFDFTLPDELIAQHPAAERSASRLL-----DGRGDAIADRRFADLPDLLLPGDLLVFN 61
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN-----SWSVYARPSKVIKKGDILHF 117
+TKV+ A+L G + + + +SP+ + + + SK G +L
Sbjct: 62 DTKVVKARLFGQKLS-----GGRLELLIERVLSPHLDAGHEVAAHMKVSKKPLPGAMLQ- 115
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
AT++ +W L + ++ G +PLPPYI D D
Sbjct: 116 ----MDGGFTATLLGRWPEAHGPLYRFRLSSDPYALMAQHGHVPLPPYITHTDSAD--DE 169
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT +AK G+VAAPTA LHF +L +L + GI VTLHVGAGTF PVK E +
Sbjct: 170 QRYQTVFAKNPGAVAAPTAALHFDEAMLEKLQARGIARASVTLHVGAGTFQPVKTETIAE 229
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH E + T +A+ + K+RGGR+V+VGTT++R LE+A P TNIFI
Sbjct: 230 HHMHFERFDVPQATHEAIAACKARGGRVVAVGTTTVRALESAA----KFGPDCCDTNIFI 285
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPG+ F+ VD+L++NFHLPKSTL+MLVSAF G +Y+HAI YRF+SYGD LL
Sbjct: 286 TPGFDFKVVDVLLTNFHLPKSTLMMLVSAFSGHGHIMALYRHAIEARYRFFSYGDAMLLA 345
Query: 358 QK 359
++
Sbjct: 346 RQ 347
>gi|225621383|ref|YP_002722641.1| S-adenosylmethionine--tR-ribosyltransferase-isomerase [Brachyspira
hyodysenteriae WA1]
gi|225216203|gb|ACN84937.1| S-adenosylmethionine--tR-ribosyltransferase-isomerase [Brachyspira
hyodysenteriae WA1]
Length = 358
Score = 375 bits (964), Expect = e-102, Method: Composition-based stats.
Identities = 122/360 (33%), Positives = 193/360 (53%), Gaps = 19/360 (5%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
++F LP + IA P + RD +LM+++ + I + SD+ +LN D +V N++K
Sbjct: 10 YNFYLPENLIATTPNYERDHCKLMILNKSTG---EIEHKIFSDIINYLNKEDILVLNDSK 66
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPN--SWSVYARPSKVIKKGDILHFFSQDGQ 123
VI A++ + N + L + + + +W K IK+ DIL+ + +
Sbjct: 67 VIPARIYAKKNTGGN-----VEILLLNKFNNDESTWECLI-KGKNIKEKDILYLDYSNLE 120
Query: 124 SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKR------PIDARDY 177
+ + + + L+ + + +G +PLPPYI + R + +D
Sbjct: 121 NVGNIEAVLEKDNISTKLIKFSKPLT-SEILDAIGKVPLPPYIIQSRKKKGEEEYNDKDK 179
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQ YAK +GS+A+PT+GLHFT LL ++ S+GI V +VTLHVG TF P+K +D +
Sbjct: 180 EFYQNVYAKNEGSIASPTSGLHFTKELLEKIKSMGITVCYVTLHVGFSTFNPLKEDDLRN 239
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H+MH E I + + + K G R+VS GTT R+LE+ + G T+IFI
Sbjct: 240 HVMHEEKFIIPKESYDIIINAKKDGRRVVSCGTTVARVLESEYD-NYDFKRMEGSTDIFI 298
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
P Y+F+ VD L++NFH P STLL +VSAF G + Y+ A+ + YRF+SYGD ++
Sbjct: 299 YPPYKFKCVDALITNFHTPHSTLLAMVSAFAGYDNIMNAYKTAVENNYRFFSYGDAMFMY 358
>gi|226329117|ref|ZP_03804635.1| hypothetical protein PROPEN_03020 [Proteus penneri ATCC 35198]
gi|225202303|gb|EEG84657.1| hypothetical protein PROPEN_03020 [Proteus penneri ATCC 35198]
Length = 307
Score = 374 bits (962), Expect = e-102, Method: Composition-based stats.
Identities = 118/303 (38%), Positives = 178/303 (58%), Gaps = 14/303 (4%)
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
FNNT+VI A++ G + +I + + + + R SK K+G L
Sbjct: 5 CWFFNNTRVIPARIYGRKAS-----GGKIEVLVERMLDEHRVLAHVRASKSPKEGAALVL 59
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+ ++AT++ + +T + + ++ ++ +G +PLPPYI RP + D
Sbjct: 60 GEDE---SVQATMVARHDT--LFEIRFDDERDVLTILNSIGHMPLPPYI--DRPDEESDK 112
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT Y + G+VAAPTAGLHF LL L G+++ FVTLHVGAGTF PV+V++ ++
Sbjct: 113 ELYQTVYNERPGAVAAPTAGLHFDEPLLQALKEKGVEMAFVTLHVGAGTFQPVRVDNIEE 172
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNI 295
H MHSE + A+ + K+RG R+++VGTTS+R LE+A T D +I P+ T I
Sbjct: 173 HTMHSEYAEVPQDVVDAVLACKARGNRVIAVGTTSVRSLESAAKATNDALIAPFFDDTQI 232
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
FI PGY+++ +D L++NFHLP+STL+MLVSAF G T Y+ A+ YRF+SYGD
Sbjct: 233 FIYPGYQYQVIDALITNFHLPESTLIMLVSAFAGYRNTMNAYKEAVEQEYRFFSYGDAMF 292
Query: 356 LFQ 358
+ +
Sbjct: 293 ITR 295
>gi|21672414|ref|NP_660481.1| S-adenosylmethionine:tRNA ribosyltransferase [Buchnera aphidicola
str. Sg (Schizaphis graminum)]
gi|25009009|sp|Q8KA10|QUEA_BUCAP RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|21623024|gb|AAM67692.1| S-adenosylmethionine:tRNA ribosyltransferase [Buchnera aphidicola
str. Sg (Schizaphis graminum)]
Length = 357
Score = 374 bits (961), Expect = e-101, Method: Composition-based stats.
Identities = 133/359 (37%), Positives = 195/359 (54%), Gaps = 16/359 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + F F +P S IA P F R +RL++++ + I+ ++ +NS D I+
Sbjct: 1 MHLSNFYFKIPKSLIAFYPCFIRSQSRLLIINGHTGK---IAHKFFFNILNEINSGDLII 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI A+L G + + + L ++ NS + S IK L F +
Sbjct: 58 FNDTKVIPARLFGYK-----KSGGRVEVLLERILNKNSILASIKSSNEIKMNSYLFFGKK 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ ++++ +I N I+ + + +G IPLPPYI KR + D Y
Sbjct: 113 N---KIKSFIIGYKNPFYIIKFLHNK-KSVIDIFNNIGHIPLPPYI--KRFNEKIDSSLY 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y K GSVAAPTAGLHF LL L G+ + F+TLH+G+GTF P++ + HIM
Sbjct: 167 QTVYKKNLGSVAAPTAGLHFDLPLLEALSKKGVDIDFLTLHIGSGTFQPIRTAKIEKHIM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED--GIINPWSGFTNIFIT 298
HSE+ + + Q + K +GGRI++VGTT+LR LE+A + + TNIFI
Sbjct: 227 HSELVEVSSNLIQKIKLCKKKGGRIIAVGTTTLRALESAYHSNSWNNKKNYVKDTNIFIY 286
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+ VD L++NFH P+STL+MLV +F G + T Y AI + YRF+SYGD +
Sbjct: 287 PGYKHNVVDALITNFHFPESTLIMLVCSFLGYKNTMNAYHEAIKNNYRFFSYGDAMYIT 345
>gi|303232835|ref|ZP_07319519.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Atopobium
vaginae PB189-T1-4]
gi|302481025|gb|EFL44101.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Atopobium
vaginae PB189-T1-4]
Length = 387
Score = 374 bits (961), Expect = e-101, Method: Composition-based stats.
Identities = 123/398 (30%), Positives = 189/398 (47%), Gaps = 52/398 (13%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD++LP IA PV PRDS +L+V+H + I D+ + + D IV
Sbjct: 1 MRTDDFDYELPEDHIAQAPVTPRDSCKLLVLHRDTG---EIEHKHFFDIIDYFDEGDLIV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP-----NSWSVYARPSKVIKKGDIL 115
N T+V+ A+L G + L R + W P + +K G L
Sbjct: 58 ANKTRVLPARLIGKK----KPSGITCETLLLRRREDLDPMGSIWECLVNPGRRMKPGVCL 113
Query: 116 HFFSQDGQSR------LEATVIDKWNT--GEILLVF-SISGIELERQISLVGTIPLPPYI 166
+ + L A ++D G L+ F +G+ L+ I G +PLPPYI
Sbjct: 114 EYREGGLHAPDSAPVVLTARMLDFIEENRGGRLVKFTPAAGLSLDSAIHKAGHVPLPPYI 173
Query: 167 ARKRPIDARDYVDYQTTYA-KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAG 225
R D YQT Y+ + S A+PTAGLHFT+ L+ R+ G++ V L VG
Sbjct: 174 TRYEG----DPEKYQTVYSMHEEHSAASPTAGLHFTNELIERIKQKGVQWKTVELEVGID 229
Query: 226 TFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE-------- 277
TF V+ +D H MH+E + A+++ K+ G R++++GTTS+R LE
Sbjct: 230 TFRLVEEDDPTQHEMHTERYHVPQDVVDAVHATKAAGKRVIAIGTTSVRSLESAFDTTCA 289
Query: 278 -----------------TATTEDGIINPWS-GFTNIFITPGYRFRAVDILMSNFHLPKST 319
A G I + T+++I PGY + VD +++NFH+P+ST
Sbjct: 290 CATPPVCAQRFESCPDAAAVCGHGDIVACANATTSLYIMPGYTWHVVDCMVTNFHVPRST 349
Query: 320 LLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
L+M+VS+F ++ Y +AI H YRF S+GD ++
Sbjct: 350 LMMMVSSFASRDQIMDAYANAIEHNYRFLSFGDAMIML 387
>gi|119356633|ref|YP_911277.1| queuosine biosynthesis protein [Chlorobium phaeobacteroides DSM
266]
gi|166216712|sp|A1BEM6|QUEA_CHLPD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|119353982|gb|ABL64853.1| Queuosine biosynthesis protein [Chlorobium phaeobacteroides DSM
266]
Length = 341
Score = 374 bits (961), Expect = e-101, Method: Composition-based stats.
Identities = 128/363 (35%), Positives = 186/363 (51%), Gaps = 28/363 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD++LP S IA P R S RL+V+ + I + L FL D +V
Sbjct: 1 MKVSDFDYELPESHIARYPPDERGSTRLLVLQRSTG---EIMHSRYAGLHGFLRKGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN++V+ A++ + +I L + V R S +KKGD L +
Sbjct: 58 LNNSRVVKARMFAFKP-----TGGKIELVLLEKHGDEQNLVLYRGS--LKKGDALLAYGC 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ V + G +L G ++ +P+PPY+ KR + D Y
Sbjct: 111 EFG------VEELVGQGVAVLSVKGEG-TVQDVFERYAAMPIPPYL--KREAEEIDRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ GSVAAPTA L+ T L L G+ + +TLHVG GTF+P++V+ D+H+M
Sbjct: 162 QTVFAEQPGSVAAPTASLNMTGELFDSLRQKGVSIASMTLHVGLGTFLPIRVDHFDEHVM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT------EDGIINPWSGFTN 294
H E I T + + K+ GGR+++VGTT R LE A +G + SG +
Sbjct: 222 HREFYVIPDETIALIRTTKNNGGRVIAVGTTVTRALEHAADVVFNSNGNGSV---SGEAD 278
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
IFI PGYRFR +D L++NFH P+ST+LML +AF G E+ Y A+ Y F SYGD+
Sbjct: 279 IFIYPGYRFRVIDALLTNFHAPRSTVLMLTAAFAGAEKLFHAYAEALRWEYDFLSYGDSM 338
Query: 355 LLF 357
L+
Sbjct: 339 LIL 341
>gi|218887143|ref|YP_002436464.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218758097|gb|ACL08996.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 417
Score = 374 bits (960), Expect = e-101, Method: Composition-based stats.
Identities = 136/391 (34%), Positives = 187/391 (47%), Gaps = 41/391 (10%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNL---SCPLVISDHLVSDLPAFLNSNDA 58
++ + F LP +IA P R +RL+V+ ++ +DL L
Sbjct: 33 RLESYRFHLPEDQIAQHPAPERGGSRLLVLDRRTMEKGSAAALTHAHFADLCDHLPEGCL 92
Query: 59 IVFNNTKVITAQLNGVRFCHI---------------------NRREKEISCTLHMRVSPN 97
+V NN+KV+ A+L G+R S +R
Sbjct: 93 LVANNSKVLPARLLGLRPTGGKVEFLLLTPLPLLEELARSDAGAGSGRPSTGNGLRDEGA 152
Query: 98 SWSV-----YARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELER 152
W R SK I+ GD++ F L VI + G + G +L +
Sbjct: 153 GWRSVPAEGLLRASKKIRPGDVMDFG-----PHLRVEVIQPGDFGRSAVRLHWMG-DLRQ 206
Query: 153 QISLVGTIPLPPYIARKRPIDA----RDYVDYQTTYAK--IQGSVAAPTAGLHFTSNLLS 206
G +PLPPYI R+ + + D YQT YA GSVAAPTAGLHFT +L +
Sbjct: 207 LFLQQGHLPLPPYIRRETGVSSSDAQEDRDRYQTVYADDSRLGSVAAPTAGLHFTDDLRA 266
Query: 207 RLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIV 266
RL + K VTL+VG GTF PV+ D H MH E + TA A+ + K+ G +V
Sbjct: 267 RLAATDRKWAEVTLYVGYGTFSPVRCADIRQHAMHREYIEVSEATAAAIRAAKAEGRPVV 326
Query: 267 SVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSA 326
+VGTTS R LE G + ++G+T+IFI PGYRF D +++NFHLP+S+LLMLVSA
Sbjct: 327 TVGTTSTRTLEGTVRACGEVRAFTGWTDIFIKPGYRFTVADHIITNFHLPESSLLMLVSA 386
Query: 327 FCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F G Y A++ YRF+SYGD LL
Sbjct: 387 FAGRTRVLSAYAEAVARGYRFFSYGDAMLLL 417
>gi|289523146|ref|ZP_06440000.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Anaerobaculum hydrogeniformans ATCC BAA-1850]
gi|289503689|gb|EFD24853.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Anaerobaculum hydrogeniformans ATCC BAA-1850]
Length = 313
Score = 374 bits (960), Expect = e-101, Method: Composition-based stats.
Identities = 130/331 (39%), Positives = 181/331 (54%), Gaps = 20/331 (6%)
Query: 29 MVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISC 88
MV++ C + ++ +L D +VFN+TKVI A+ G + ++
Sbjct: 1 MVLNRRERC---LEHACFYEIIKYLRRGDVLVFNDTKVIPARFLGQKP-----TGAKVEV 52
Query: 89 TLHMRVSP--NSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSIS 146
L W RP K ++ GD + + V+D+ + G L+
Sbjct: 53 LLVKPKDSAWEHWEAMVRPGKRLESGDEVVIDDEA-----SILVLDRLSQGMRLVRIKGK 107
Query: 147 GIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLS 206
I G +PLPPYI + R YQT YA++ GSVAAPTAG HFT LL
Sbjct: 108 DTP-YNIIEKKGKVPLPPYIRG----NGRASEYYQTVYARVDGSVAAPTAGFHFTEELLD 162
Query: 207 RLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIV 266
L S GI++ +VTLHVG GTF PVKV+D H MH E I + TA+ +N K G RI+
Sbjct: 163 ELRSCGIELAYVTLHVGPGTFRPVKVDDVRKHEMHCEDYHISSDTAETINRAKKEGRRII 222
Query: 267 SVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSA 326
+VGTT +R LE+++ E+G + G T++FI PGY+F+ VD +++NFHLPKSTLLMLVSA
Sbjct: 223 AVGTTVVRCLESSSDEEGFVLFGKGSTDLFIFPGYKFKVVDGMVTNFHLPKSTLLMLVSA 282
Query: 327 FCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F G + + Y+ AI YRFYS+GD L+
Sbjct: 283 FAGYDFVMEAYKVAIERRYRFYSFGDAMLII 313
>gi|298531020|ref|ZP_07018421.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfonatronospira thiodismutans ASO3-1]
gi|298509043|gb|EFI32948.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfonatronospira thiodismutans ASO3-1]
Length = 360
Score = 373 bits (958), Expect = e-101, Method: Composition-based stats.
Identities = 121/362 (33%), Positives = 194/362 (53%), Gaps = 19/362 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D++L P+RIA P R +RL+++ + + ++ L +V N
Sbjct: 9 LENYDYELDPARIASWPTPDRSESRLLMLDRQGG---ELQEDRFENIDQHLEPGSLLVVN 65
Query: 63 NTKVITAQLNGVRFCHINRR------EKEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
N+KV+ A+L G + + IS + R R S+ + GD ++
Sbjct: 66 NSKVLPARLMGHKESSGSVEFLLLTPLPLISPAMENREKKARVECLVRASRRPRPGDWVY 125
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
F + ++ + G +G +L G +PLPPYI KR + +D
Sbjct: 126 FAEN-----VRFRLVQDLDQGRAKGDLFWTG-DLGDFFVRYGHVPLPPYI--KRQDEPQD 177
Query: 177 YVDYQTTYA--KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
YQT YA QGSVAAPTAG+HFT L RL +G V L+VG GTF PVK D
Sbjct: 178 VNRYQTVYAHPDKQGSVAAPTAGMHFTPKLCHRLEDLGCMWAEVCLYVGYGTFSPVKSAD 237
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
H+MH E + + A+++ + +++G ++V+VGTT++R LE+ G + P++G+++
Sbjct: 238 IRQHVMHPEYIEVGSQAAESIRAARAQGRKVVAVGTTTVRTLESVCRMKGRVEPFTGWSD 297
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
++I PG++F AVD L++NFHLPKS+LL++VSAF G + YQ+A +RF+SYGD
Sbjct: 298 LYIYPGFKFEAVDQLITNFHLPKSSLLIMVSAFAGRRKILHSYQYAREKGFRFFSYGDAM 357
Query: 355 LL 356
+
Sbjct: 358 FI 359
>gi|297183447|gb|ADI19579.1| s-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [uncultured Acidobacteria bacterium
HF0770_27F21]
Length = 355
Score = 373 bits (958), Expect = e-101, Method: Composition-based stats.
Identities = 123/367 (33%), Positives = 184/367 (50%), Gaps = 22/367 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++ FD+ LP IA P RD +RL+ + ++ S++ +++P L D ++
Sbjct: 1 MRIELFDYHLPADLIAQSPPERRDESRLLSLIRGVTDKP--SEYRFAEVPELLREGDVLI 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVS------PNSWSVYARPSKVIKKGDI 114
N+ V +L R + L + W R K ++ G+I
Sbjct: 59 VNDAMVAPQRLYAQRT-----TGGAVEILLLDDAGASVGSQGSVWEAMIRGGKRLRPGEI 113
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID- 173
L+ D + L VI LV + E + G +PLPPYI R R +
Sbjct: 114 LYL--DDCATHL---VIHGETKKGRHLVELPANYRAEEVLDRWGQMPLPPYIRRYRGDEH 168
Query: 174 -ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
D YQT YA+ G+VAAPTAGLHFT LL ++ G+K+ +TL VG GTF PV+V
Sbjct: 169 GTIDRERYQTVYAREPGAVAAPTAGLHFTQALLEKIERDGVKIETLTLKVGTGTFQPVRV 228
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN--PWS 290
+H M SE + A+ + K++ GR++ VGTT +R LE A I +
Sbjct: 229 GQVAEHRMESESYVLPDQCVSAIVAAKAKQGRVIGVGTTVVRTLEHAARASDGIENAAGA 288
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G +IFI PG+RF VD +++NFHLP+ST +++ +AF G E + Y+ A+ +RFYSY
Sbjct: 289 GKADIFIYPGFRFHVVDAMLTNFHLPRSTPILMAAAFAGRERLLQAYEFAVRQRFRFYSY 348
Query: 351 GDTSLLF 357
GD L+
Sbjct: 349 GDAMLIT 355
>gi|224373166|ref|YP_002607538.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Nautilia
profundicola AmH]
gi|223589238|gb|ACM92974.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Nautilia
profundicola AmH]
Length = 336
Score = 373 bits (958), Expect = e-101, Method: Composition-based stats.
Identities = 130/366 (35%), Positives = 190/366 (51%), Gaps = 42/366 (11%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
V +D++LP + IA PV PRDSA+L+V I+ + ++ F+ +FN
Sbjct: 2 VSSYDYNLPENLIARYPVTPRDSAKLLVYDRKTD---RITHTVFRNILDFVGE-SHFIFN 57
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NTKVI A++ G + ++ L+ +K G L F
Sbjct: 58 NTKVIKARIFGTKE-----TGGKVELLLNRPYRDG---YLVYIRGKVKPGSRLFF----- 104
Query: 123 QSRLEATVIDKWNTGEILL-----------VFSISGIELERQISLVGTIPLPPYIARKRP 171
L A V++ + G ++ I ++L + + +G +PLPPYI KR
Sbjct: 105 DKGLMAEVVELLDDGSRVVKFKVKSEKCKTEKEIDFLQLVKILEEIGHVPLPPYI--KRE 162
Query: 172 IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK 231
+ D +YQT +AK +G+VAAPTA LHFT LL+++ ++TLHVGAGTF PV
Sbjct: 163 DEKIDEKEYQTVFAKKEGAVAAPTASLHFTDELLNKIDKKS----YLTLHVGAGTFKPVD 218
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSG 291
VED +H MHSE I TA+ L IV+VGTT R +E + SG
Sbjct: 219 VEDIREHKMHSEFFEIPEDTARVL----DGSEEIVAVGTTVTRTVEYYARTGKL----SG 270
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
++F+ P V+ L++NFHLPKSTL+MLV+AF G ++T ++Y+ AI + YRFYSYG
Sbjct: 271 ECDLFLNPLNPPIRVNHLLTNFHLPKSTLIMLVAAFIGRKKTLELYEEAIKNEYRFYSYG 330
Query: 352 DTSLLF 357
D L+
Sbjct: 331 DAMLII 336
>gi|302335516|ref|YP_003800723.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Olsenella
uli DSM 7084]
gi|301319356|gb|ADK67843.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Olsenella
uli DSM 7084]
Length = 387
Score = 373 bits (957), Expect = e-101, Method: Composition-based stats.
Identities = 128/396 (32%), Positives = 188/396 (47%), Gaps = 50/396 (12%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD+ LP S IA P PRD+ RL+V+ + +DL +L D +V
Sbjct: 1 MRTDDFDYPLPDSLIAQVPCEPRDACRLLVLDRKDGS---VEHRRFTDLVDYLEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVS----PNSWSVYARPSKVIKKGDILH 116
N T+V+ A+L G + E L R + W +P K +K+G ++
Sbjct: 58 ANRTRVLPARLMGHKRGTGGVSET---LLLARREDVDALGHVWECLVKPGKRLKQGAVVE 114
Query: 117 FFSQ------DGQSRLEATVIDKWNT--GEILLVFS-ISGIELERQISLVGTIPLPPYIA 167
+ D L VID + G L+ F + G+ L+ I G +PLPPYI
Sbjct: 115 YREGGIHAPMDWPVVLTGEVIDYVDESRGGRLVRFEPVGGLSLDEAIHRAGHVPLPPYIT 174
Query: 168 RKRPIDARDYVDYQTTYA-KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGT 226
D YQT Y+ + + S AAPTAGLHFT L+ R+ I V L VG T
Sbjct: 175 DYEG----DPERYQTVYSMREEHSAAAPTAGLHFTPELIKRIRGRDIDFRTVELEVGIDT 230
Query: 227 FMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED--- 283
F V+ +D H MH+E + A+++ K+ G R+++VGTTS+R LE+A D
Sbjct: 231 FRLVEEDDPTQHAMHTERYHVGRGVVDAVHATKAAGHRVIAVGTTSVRSLESAFDPDVPA 290
Query: 284 -----------------------GIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTL 320
I+ T++++ PG F VD +++NFH+P+STL
Sbjct: 291 WGTPVCARRFEGARDSARLLGRGDIVERVDATTDLYLMPGSTFHVVDAMITNFHVPRSTL 350
Query: 321 LMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+MLVSAF E+ YQ A++ YRF S+GD L+
Sbjct: 351 MMLVSAFATREQIMGAYQAAMNEGYRFLSFGDAMLI 386
>gi|162449922|ref|YP_001612289.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Sorangium
cellulosum 'So ce 56']
gi|189038881|sp|A9FI02|QUEA_SORC5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|161160504|emb|CAN91809.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Sorangium
cellulosum 'So ce 56']
Length = 374
Score = 373 bits (957), Expect = e-101, Method: Composition-based stats.
Identities = 140/378 (37%), Positives = 203/378 (53%), Gaps = 32/378 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + D++LP + IA RP RD ARL++V + + DL ++ ++
Sbjct: 1 MRCELLDYELPEALIASRPPEERDGARLLLVDRGRRAG-EVEHAAIRDLDRYIERGALVI 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP-------------------NSWSV 101
N+TKV+ A+L G + ++ L R+ W
Sbjct: 60 VNDTKVVPARLFGRK----RGTGGQVELFLLHRLDGAPAGAEDLGGGPQESAPRSERWRA 115
Query: 102 YARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILL-VFSISGIELERQISLVGTI 160
R SK I+ G +L + L A V+++ G + + + S +G+ + I G +
Sbjct: 116 MGRASKPIRPGSVLDI---ERDGALVAEVLERAEDGVLTVQLSSPAGLSVAAAIDAYGHV 172
Query: 161 PLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTL 220
PLPPY+ R DA D YQT +A++ G+VAAPTAGLH + L+ RL + G+++ VTL
Sbjct: 173 PLPPYL--GRGDDASDRERYQTIFARVPGAVAAPTAGLHLSPGLVERLRANGVEIASVTL 230
Query: 221 HVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT 280
HVG GTF PV V+D D H MH+E+ I TA A+ ++RG ++++GTT +R LE+A
Sbjct: 231 HVGLGTFQPVTVDDLDLHPMHAEVYSIPDATAGAIAGARARGAPVIAIGTTVVRALESAA 290
Query: 281 --TEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQ 338
G++ SG T + I PGYRFR VD L++NFHLP+STLL LV AF G E T Y+
Sbjct: 291 DPARAGLVQAQSGETRLLIQPGYRFRVVDALLTNFHLPRSTLLALVFAFAGRERTLLAYR 350
Query: 339 HAISHAYRFYSYGDTSLL 356
AI YRFYSYGD L+
Sbjct: 351 AAIDAGYRFYSYGDAMLI 368
>gi|33519694|ref|NP_878526.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Blochmannia floridanus]
gi|46576954|sp|Q7VQB2|QUEA_BLOFL RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|33517357|emb|CAD83742.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Candidatus
Blochmannia floridanus]
Length = 353
Score = 373 bits (957), Expect = e-101, Method: Composition-based stats.
Identities = 127/360 (35%), Positives = 197/360 (54%), Gaps = 14/360 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +F F LP I+ P R RL+V + I+ H SDLP LN D ++
Sbjct: 1 MRTSDFKFQLPKKLISRYPNLKRSECRLLVFDRLTTK---ITHHFFSDLPEILNPGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+T+VI A+L G K++ + ++ + S++++ G+ S
Sbjct: 58 FNDTRVIPARLYGYSV-----TGKKVEILIERILNDYQAVAHIYSSELVQLGEKFILGSN 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + +I +I+ + ++ +G IP+PPY R + DY Y
Sbjct: 113 LNIYIYVIKIYYSYKLFKIYF-DNINYNNVLSLLNDIGHIPIPPYFH--RLDEIIDYELY 169
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y GS+AAPTAGLHF + L++RL+++GI++ F+TLH+G+ TF PV+V + H+M
Sbjct: 170 QTVYGSKLGSIAAPTAGLHFDTLLINRLLNLGIEISFITLHIGSATFQPVRVTLIEHHVM 229
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDG---IINPWSGFTNIFI 297
H E + T +++ K R R+++VGTT ++ LETA II +SG++ IFI
Sbjct: 230 HDEYIEVSQSTIESILRCKERKNRVIAVGTTVVKALETAAMNTKSLSIIESFSGYSRIFI 289
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGYRF+ VD L++NFHLP+STL+MLV+AF G ++Y AI Y+F SYGD+ +
Sbjct: 290 FPGYRFKIVDSLITNFHLPESTLIMLVAAFAGYRNILRVYNAAIDLNYKFLSYGDSMFIT 349
>gi|194333528|ref|YP_002015388.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Prosthecochloris aestuarii DSM 271]
gi|194311346|gb|ACF45741.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Prosthecochloris aestuarii DSM 271]
Length = 341
Score = 372 bits (956), Expect = e-101, Method: Composition-based stats.
Identities = 131/359 (36%), Positives = 192/359 (53%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD++LP S IAL P R + RL V+ I+ +DL FL D +V
Sbjct: 1 MNVSDFDYELPESSIALYPPAERGTTRLEVLCRETGS---ITHARYADLHRFLEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+L + + +I L + + V R +K+GDIL
Sbjct: 58 LNNTRVILARLFASK-----KTGAKIELVLLEKHERDQNLVMYR--GRLKRGDILI---- 106
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
S E ++D I V +SG ++ +P+PPY+ R + D Y
Sbjct: 107 ---SHGEELLVDSLVGNGIASVSCLSGRQIASFFQEFAEVPIPPYLRRD--AEEVDRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+I GSVAAPTA L+ T L+ L G+++ +TLHVG GTFMP++V+D H+M
Sbjct: 162 QTVFAEIPGSVAAPTASLNMTPELIDTLRLKGVQIASITLHVGLGTFMPIRVDDLASHVM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT---EDGIINPWSGFTNIFI 297
H E I A+ + R R+++VGTT R LE A+ + P G +IFI
Sbjct: 222 HREYYDIPVSVVSAIRDARDRRKRVIAVGTTVTRALEHASQTVLHTNPVMPVRGEADIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+F+ +D L++N+H P+ST+LML +AF G + +K YQ A+ + YRF SYGD+ L+
Sbjct: 282 YPGYQFQTIDALVTNYHAPRSTVLMLTAAFAGWDLLRKGYQEALQNDYRFLSYGDSMLI 340
>gi|296125826|ref|YP_003633078.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Brachyspira murdochii DSM 12563]
gi|296017642|gb|ADG70879.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Brachyspira murdochii DSM 12563]
Length = 358
Score = 372 bits (956), Expect = e-101, Method: Composition-based stats.
Identities = 133/361 (36%), Positives = 195/361 (54%), Gaps = 21/361 (5%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
++F LP + IA P + RD RLM ++ N + + +D+ +LN +D +V N++K
Sbjct: 10 YNFYLPENLIATEPNYERDHCRLMTLNKNTG---ELEHKIFADIINYLNKDDVLVLNDSK 66
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF--FSQDGQ 123
VI A++ + N EI + ++W K IK+ D L+ D
Sbjct: 67 VIPARIYAKKSTGGN---AEILLLNKVNNDESTWECLI-KGKNIKEADTLYLDYAHLDNV 122
Query: 124 SRLEATVI-DKWNTGEILLVFSISGIELERQISLVGTIPLPPYI--ARKRPIDAR----D 176
+EA + D +T I ++ + +G IPLPPYI +RKR + D
Sbjct: 123 GNIEALIEKDNISTKLIKFSKPLTN----DILDTIGKIPLPPYIIQSRKRKGEEEYNSND 178
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQ YAK +GS+A+PT+GLHFT+ LL ++ SIG+ V +VTLHVG TF P+K +D
Sbjct: 179 KEFYQNVYAKNEGSIASPTSGLHFTNELLDKIKSIGVTVCYVTLHVGFSTFNPLKEDDLR 238
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+HIMH E I + + + K G RIVS GTT R+LE+ + G TNIF
Sbjct: 239 NHIMHEEKFIIPKDSYDIIINAKKEGRRIVSCGTTVARVLESEYD-NYDFKRLEGSTNIF 297
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P Y+F+ VD L++NFH P STLL +VSAF G + Y+ A+ + YRF+SYGD +
Sbjct: 298 IYPPYKFKCVDALITNFHTPHSTLLAMVSAFAGYDNIMNAYKTAVDNNYRFFSYGDAMFI 357
Query: 357 F 357
+
Sbjct: 358 Y 358
>gi|328955738|ref|YP_004373071.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Coriobacterium glomerans PW2]
gi|328456062|gb|AEB07256.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Coriobacterium glomerans PW2]
Length = 403
Score = 372 bits (955), Expect = e-101, Method: Composition-based stats.
Identities = 126/410 (30%), Positives = 190/410 (46%), Gaps = 62/410 (15%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPN-------LSCPLVISDHLVSDLPAFL 53
M +FD+DLP IA PV PRDS R++V+H I SD+ +L
Sbjct: 1 MRTDDFDYDLPEELIAQAPVEPRDSCRMLVMHRRVASAAAAADARGDIEHRRFSDIIDYL 60
Query: 54 NSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP-----NSWSVYARPSKV 108
D +V N T+V+ A+L G + L R + W P +
Sbjct: 61 APGDLLVANETRVMPARLVGTK----RETGGVAETLLLKRREDLDALGSVWECLVSPGRR 116
Query: 109 IKKGDILHFFSQDGQSRLEA--------TVIDKWNTGEILLVFSISGIE-------LERQ 153
++ G ++ + + + ++A + + G L+ F G E L+
Sbjct: 117 LRPGSVIEYRAGGLHAPVQAPPVLIGQIEAFVENSKGGRLVRFHPVGSEALDGPCTLDAA 176
Query: 154 ISLVGTIPLPPYIARKRPIDARDYVDYQTTYA-KIQGSVAAPTAGLHFTSNLLSRLISIG 212
I G +PLPPYI D +YQT Y+ + + S AAPTAGLHFT L+ RL + G
Sbjct: 177 IHAAGHVPLPPYITSYEG----DPENYQTVYSMREEHSAAAPTAGLHFTEELIDRLRAKG 232
Query: 213 IKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTS 272
+ V L VG TF V+ +D DH+MH+E + A +A+ + K+ GGR+V+VGTT+
Sbjct: 233 VGWKTVELEVGIDTFRLVQEDDPTDHVMHTERYHVSADVIEAVRATKAGGGRVVAVGTTA 292
Query: 273 LRLLETATTE--------------------------DGIINPWSGFTNIFITPGYRFRAV 306
+R LE+A ++ T++++ PG F V
Sbjct: 293 VRSLESAFDTMRPASQPPVVARLFENAPDSAAVCCAGDLVERRDATTSLYLMPGSTFHVV 352
Query: 307 DILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
D L++NFH+P+STL+MLVSAF E+ Y A+ YRF S+GD +
Sbjct: 353 DALITNFHVPRSTLMMLVSAFASREQIMDAYAQAVRERYRFLSFGDAMFI 402
>gi|307721623|ref|YP_003892763.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Sulfurimonas autotrophica DSM 16294]
gi|306979716|gb|ADN09751.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Sulfurimonas autotrophica DSM 16294]
Length = 342
Score = 371 bits (952), Expect = e-100, Method: Composition-based stats.
Identities = 128/362 (35%), Positives = 184/362 (50%), Gaps = 30/362 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
++ +DF LP IA P PRD A+L+V I+ +L FL A++
Sbjct: 6 LLTSSYDFTLPDELIASYPASPRDHAKLLVYDRATDT---ITHTFFYNLEEFLPKECALI 62
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI A+L G + +I ++ ++ +VY R +K G + F
Sbjct: 63 FNDTKVIKARLFGQKPS-----GGKIELLINRALNACDVNVYIR--GKVKAGSEIFF--- 112
Query: 121 DGQSRLEATVIDKWNTGEILL-----VFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
+ L+A V + G + + +L I +G IPLPPYI +R +
Sbjct: 113 --EDNLKAKVTKLNDDGSREVNFYQNDTLLRFEDLLPIIDKIGHIPLPPYI--QRADEDE 168
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D +YQ+ +A +G+VAAPTA LHFT R+ K +VTLHVG+GTF PV+ +
Sbjct: 169 DANEYQSVFACQEGAVAAPTASLHFTPAQHERICKNH-KHAYVTLHVGSGTFKPVEADII 227
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+H MHSE I L IVSVGTTS R +E G N+
Sbjct: 228 TEHPMHSEYYDISPQAQAIL----DSNIPIVSVGTTSTRTIEFYARHK---EQTKGEANL 280
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
F+ P + V+ L++NFHLPKSTLLMLV++F G+++T+++Y AI YRFYSYGD L
Sbjct: 281 FLHPNNKPLRVNHLLTNFHLPKSTLLMLVASFVGLQKTQELYAEAIKEKYRFYSYGDAML 340
Query: 356 LF 357
+
Sbjct: 341 IL 342
>gi|283954143|ref|ZP_06371668.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni 414]
gi|283794422|gb|EFC33166.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni 414]
Length = 342
Score = 371 bits (952), Expect = e-100, Method: Composition-based stats.
Identities = 131/363 (36%), Positives = 192/363 (52%), Gaps = 31/363 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+++ +D+ LP IA P P++ ARL+V + I +L FL N AI
Sbjct: 5 LLLSNYDYTLPNKLIANYPANPKEDARLLVFNRK---NKQIFHTTFKNLQDFL-PNCAIF 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMR-VSPNSWSVYARPSKVIKKGDILHFFS 119
FN+TKVI A++ G + +I LH ++ S + +KK +ILHF
Sbjct: 61 FNDTKVIKARIYGNKAS-----GGKIELFLHQPFLNSKSPLFLVQIKGRVKKDEILHF-- 113
Query: 120 QDGQSRLEATVIDKWNTGEILLVFS-----ISGIELERQISLVGTIPLPPYIARKRPIDA 174
+ L+A +++ + G + F + L + +G IPLPPYI KR +
Sbjct: 114 ---KQNLKAQIVELLDDGLRKVQFFQNDKILDTSNLYNLLDKIGHIPLPPYI--KREDEK 168
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D DYQ+ +AK G+VAAPTA LHF+ +L L ++Y +TLHVGAGTF V+ E+
Sbjct: 169 SDLKDYQSIFAKNLGAVAAPTASLHFSKTMLENLRKKH-EIYHLTLHVGAGTFKSVECEN 227
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
+H MHSE I + ++S ++ I+ VGTT R +E SGF +
Sbjct: 228 IQEHKMHSEFFNIPQQACEIIDSKQA----ILGVGTTVTRTIEYYART----KTKSGFCD 279
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
+F+ P + + L++NFHLPKSTL+MLVSAF G E+ K+Y+ AI YRFYSYGD
Sbjct: 280 LFLYPQNQPIRQNHLLTNFHLPKSTLIMLVSAFIGREQCLKLYELAIKEKYRFYSYGDAM 339
Query: 355 LLF 357
L+
Sbjct: 340 LIL 342
>gi|21673380|ref|NP_661445.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Chlorobium
tepidum TLS]
gi|34222900|sp|Q8KEY7|QUEA_CHLTE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|21646477|gb|AAM71787.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Chlorobium
tepidum TLS]
Length = 340
Score = 370 bits (950), Expect = e-100, Method: Composition-based stats.
Identities = 125/359 (34%), Positives = 182/359 (50%), Gaps = 23/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD+ LP RIA P R S RL+V++ I+ + L L D +V
Sbjct: 1 MKVSDFDYALPEERIACYPPAKRGSTRLIVLNRATGS---ITHSAYASLHEELRPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN++VI A+L + I L + R ++ GD L +
Sbjct: 58 LNNSRVIRARLIAHKP-----TGARIELMLLEKHEEAQNLALYR--GRLRIGDRL--LAH 108
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ +EA D + S + L G++P+PPY+ KR + D Y
Sbjct: 109 GVELSVEALPSDG------IARLSCATGNLADLFDAHGSVPIPPYL--KRDAEELDRERY 160
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A++ GSVAAPTA L+ T LL ++ + G+ + VTLHVG GTF+P++ E ++H+M
Sbjct: 161 QTVFAELPGSVAAPTASLNLTDELLDKINAKGVGIAHVTLHVGLGTFLPIRSERFEEHVM 220
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT---EDGIINPWSGFTNIFI 297
H E I A+ + K+ GGR+V+ GTT R LE A E G S +IFI
Sbjct: 221 HREFYNIPQTAARKIGETKASGGRVVAAGTTVTRALEHAAPKLIESGFTQEVSSEADIFI 280
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY FR +D L++NFH P+ST+LML +AF E + Y A+ + YRF SYGD+ +
Sbjct: 281 YPGYEFRIIDALITNFHAPRSTVLMLTAAFAEKELLMRAYHEALDNGYRFLSYGDSMFI 339
>gi|57168187|ref|ZP_00367326.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter coli RM2228]
gi|57020561|gb|EAL57230.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter coli RM2228]
Length = 341
Score = 369 bits (948), Expect = e-100, Method: Composition-based stats.
Identities = 132/363 (36%), Positives = 189/363 (52%), Gaps = 31/363 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+++ +D+ LP IA PV P++ A+L+V IS +L FL + A+
Sbjct: 4 LLLSSYDYTLPNELIATYPVHPKEDAKLLVFERK---NNQISHTTFKNLQDFL-PDCALF 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMR-VSPNSWSVYARPSKVIKKGDILHFFS 119
FN+TKVI A++ G + +I LH + A+ +KK +IL F
Sbjct: 60 FNDTKVIKARIYGNKSS-----GGKIELFLHQPCLDSQDSLFLAQIKGRVKKDEILSF-- 112
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIEL-----ERQISLVGTIPLPPYIARKRPIDA 174
+ L+ VI+ + G + F + L + +G IPLPPYI KR +
Sbjct: 113 ---EQNLKVKVIELLDDGLRKVQFFQNDEVLNTFKLYELLDTIGHIPLPPYI--KRSDEK 167
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D DYQ+ +AK G+VAAPTA LHF+ N+L L ++Y +TLHVGAGTF V+ E+
Sbjct: 168 SDLEDYQSIFAKNLGAVAAPTASLHFSENMLENLKKRH-EIYHLTLHVGAGTFKSVECEN 226
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
++H MHSE I +A++S K +I+ VGTT R +E GF +
Sbjct: 227 LENHKMHSEFFDIPKKACEAIDSQK----KILGVGTTVTRTIEYYART----KQNQGFCD 278
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
+F+ P D L++NFHLPKSTL+MLVSAF G + K+Y AI YRFYSYGD
Sbjct: 279 LFLHPHNPPLRQDYLLTNFHLPKSTLIMLVSAFIGRQNCLKLYDIAIKEKYRFYSYGDAM 338
Query: 355 LLF 357
L+
Sbjct: 339 LIL 341
>gi|300871265|ref|YP_003786138.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brachyspira
pilosicoli 95/1000]
gi|300688966|gb|ADK31637.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Brachyspira
pilosicoli 95/1000]
Length = 358
Score = 369 bits (947), Expect = e-100, Method: Composition-based stats.
Identities = 132/358 (36%), Positives = 189/358 (52%), Gaps = 15/358 (4%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
++F LP + IA P + RD +LM ++ N + + SD+ +LN ND +V N++K
Sbjct: 10 YNFYLPENLIATTPNYERDHCKLMTINKNTG---EVEHKIFSDIINYLNKNDILVLNDSK 66
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSR 125
VI A++ + N EI S + W K IK+ DIL+ ++
Sbjct: 67 VIPARIYAKKNTGGN---AEILLLNKFNNSEDLWECLI-KGKNIKENDILYLDYSHIENI 122
Query: 126 LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKR------PIDARDYVD 179
+ L+ + + +G IPLPPYI + R + +D
Sbjct: 123 GIIEASIIKDNISTKLIKFSKPLT-SNILDTIGKIPLPPYIIQSRKKKGEEEYNDKDKEF 181
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQ YAK +GS+A+PT+GLHFT LL ++ S+GI + +VTLHVG TF P+K ED H+
Sbjct: 182 YQNVYAKNEGSIASPTSGLHFTKELLEKIKSLGITICYVTLHVGFSTFNPIKEEDLKKHV 241
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH E I TA + + K G RIVS GTT R+LE+ D N G TNIFI P
Sbjct: 242 MHEEKFSIPKETASIIINAKKDGRRIVSCGTTVARVLESEY-NDFNFNRLEGSTNIFIYP 300
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+F+ VD L++NFH P STLL +VSAF G + Y+ A+ + Y F+SYGD + L+
Sbjct: 301 PYKFKCVDALITNFHTPHSTLLAMVSAFAGYDNIMNAYKIAVENNYHFFSYGDATFLY 358
>gi|193213085|ref|YP_001999038.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Chlorobaculum parvum NCIB 8327]
gi|238692648|sp|B3QPI5|QUEA_CHLP8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|193086562|gb|ACF11838.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Chlorobaculum parvum NCIB 8327]
Length = 340
Score = 369 bits (947), Expect = e-100, Method: Composition-based stats.
Identities = 132/359 (36%), Positives = 185/359 (51%), Gaps = 23/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V+EFD+ LP RIA P R S RL+V+ I+ + + L L D +V
Sbjct: 1 MRVEEFDYTLPEERIATYPPAERGSTRLIVLDR---AADSITHSVYASLHERLRPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN+KVI A+L + I L + R +K GD L
Sbjct: 58 LNNSKVIRARLIANKP-----TGGRIELMLLEKHEGVQNLALYR--GRLKVGDRLLAHGA 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
E TV + G + S L G++P+PPY+ KR + D Y
Sbjct: 111 ------ELTVEALPDHG--VARLSCDTANLTELFEAHGSVPIPPYL--KRDAEEVDRERY 160
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A++ GSVAAPTA L+ T LL ++ + G+ V +TLHVG GTF+P++ E ++H+M
Sbjct: 161 QTVFAELPGSVAAPTASLNLTDELLEKIKAKGVDVVHITLHVGLGTFLPIRSETFEEHVM 220
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT---TEDGIINPWSGFTNIFI 297
H E I +A + K+RGGR+V+VGTT R LE A + SG +IFI
Sbjct: 221 HREFYNIPESSAHKIGEAKARGGRVVAVGTTVTRALEHAAPRLLDSDFSQEVSGEADIFI 280
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY FR +D L++NFH P+ST+LML +AF G E ++ YQ A+ YRF SYGD+ +
Sbjct: 281 YPGYEFRIIDALLTNFHAPRSTVLMLTAAFAGKELLRRAYQEALERDYRFLSYGDSMFI 339
>gi|239905378|ref|YP_002952117.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Desulfovibrio magneticus RS-1]
gi|239795242|dbj|BAH74231.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Desulfovibrio magneticus RS-1]
Length = 370
Score = 368 bits (945), Expect = e-100, Method: Composition-based stats.
Identities = 135/366 (36%), Positives = 191/366 (52%), Gaps = 21/366 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ + F+LP + IA RP RD+ RLMV+ + + +DLP L +V
Sbjct: 16 LLASYHFELPDALIADRPCEVRDACRLMVLDRAAGS---LDHRVFTDLPDLLPEGALLVV 72
Query: 62 NNTKVITAQLNGVRFCHINRR---EKEISCTLHMRVSPNSWSV-----YARPSKVIKKGD 113
NNTKV +L G R ++ W+ R S+ + GD
Sbjct: 73 NNTKVAPVRLLGKRPTGGAAEFLLLTPVALLKPETDPATGWTSAPAAGLLRVSRPPRPGD 132
Query: 114 ILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
+ F L T + + G + S G L ++ +G +PLPPYI +R D
Sbjct: 133 RIDFAPD-----LAVTAVSRGAFGHTEVTLSWRG-ALPEILTRIGHVPLPPYI--RRADD 184
Query: 174 ARDYVDYQTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK 231
A D YQT YA+ GS AAPTAGLHFT LL+RL G ++ VT HVG GTF PV+
Sbjct: 185 AADRETYQTVYARDDKLGSAAAPTAGLHFTEELLARLAGRGFRLTAVTCHVGLGTFSPVR 244
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSG 291
VED DH MH E + A A++ K+ G +++VGTT+ R LE A E G ++G
Sbjct: 245 VEDLRDHAMHQEWIEVSPEAASAVSRAKAEGRPVIAVGTTAARTLEGAVREAGAFGAFAG 304
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
FT+IFI PG+RF VD +++NFHLP S+L+++++A G E Y A++ YRF+SYG
Sbjct: 305 FTDIFIRPGHRFAVVDGMVTNFHLPGSSLVIMLAALAGRESILAAYGQAVASGYRFFSYG 364
Query: 352 DTSLLF 357
D L+
Sbjct: 365 DAMLVL 370
>gi|189500747|ref|YP_001960217.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Chlorobium
phaeobacteroides BS1]
gi|189496188|gb|ACE04736.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Chlorobium
phaeobacteroides BS1]
Length = 341
Score = 368 bits (945), Expect = e-100, Method: Composition-based stats.
Identities = 128/360 (35%), Positives = 194/360 (53%), Gaps = 24/360 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V ++ + LP S IA+ P R + RL V+ I+ L +DL F+ D +V
Sbjct: 1 MKVSDYAYLLPESSIAIYPPRDRGATRLEVLDRRTGA---ITHALYADLDRFVGPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NN+KV+ A+L + + L + + V R +K GD+L
Sbjct: 58 LNNSKVVNARLFAQKT-----TGARVELVLLEKHGEHQELVMYR--GRLKSGDVLL---- 106
Query: 121 DGQSRLEATVIDKWNTGEILLVFSI-SGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
RL ++ GE + S G + + G +P+PPY+ KR ++ D
Sbjct: 107 SQGCRLFVESVE----GEGVARISCSDGRTVPDFFAEHGEVPIPPYL--KRDVEEVDRER 160
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A+I GSVAAPTA L+ T LL+ L S G+++ +VTLHVG GTF+P++ +D + H+
Sbjct: 161 YQTVFAEIPGSVAAPTASLNMTGQLLNSLQSKGVELAYVTLHVGLGTFLPIRGDDLEAHV 220
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT---EDGIINPWSGFTNIF 296
MH E ++ + T + + +VK GGR+++VGTT R LE A + G +G +IF
Sbjct: 221 MHREHYYLPSETVRKIQNVKKEGGRVIAVGTTVTRSLEHAASGINAPGDPKEITGEADIF 280
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PG F +D L++N+H P+ST+LML +AF G + KK Y A+ YRF SYGD+ L+
Sbjct: 281 IYPGCSFSVIDGLLTNYHAPRSTVLMLTAAFAGWDNLKKAYDEALEKGYRFLSYGDSMLI 340
>gi|86151533|ref|ZP_01069747.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni 260.94]
gi|86153214|ref|ZP_01071418.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni HB93-13]
gi|121612914|ref|YP_001000278.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni 81-176]
gi|167005231|ref|ZP_02270989.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni 81-176]
gi|315124097|ref|YP_004066101.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni ICDCCJ07001]
gi|229598024|sp|A1VYT7|QUEA_CAMJJ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|85841162|gb|EAQ58410.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni 260.94]
gi|85842940|gb|EAQ60151.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni HB93-13]
gi|87250015|gb|EAQ72973.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni 81-176]
gi|315017819|gb|ADT65912.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni ICDCCJ07001]
Length = 342
Score = 368 bits (944), Expect = e-99, Method: Composition-based stats.
Identities = 129/363 (35%), Positives = 190/363 (52%), Gaps = 31/363 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+++ +D+ L IA P P++ ARL+V I +L FL + AI
Sbjct: 5 LLLSSYDYTLANELIANYPANPKEDARLLVFDRK---NKEIFHTTFKNLKDFL-PDCAIF 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMR-VSPNSWSVYARPSKVIKKGDILHFFS 119
FN+TKVI A++ G + +I LH ++ ++ A+ +KK +IL+F
Sbjct: 61 FNDTKVIKARIYGNKAS-----GGKIELFLHQPFLNSHNPLFLAQIKGRVKKDEILYFKE 115
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELE-----RQISLVGTIPLPPYIARKRPIDA 174
L+A V++ + G + F + L+ + +G IPLPPYI KR +
Sbjct: 116 D-----LKARVVELLDDGLRKVQFFQNDKTLDTSNLYNLLDKIGHIPLPPYI--KREDEK 168
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D DYQ+ +AK G+VAAPTA LHF+ + L K+Y +TLHVGAGTF V+ E+
Sbjct: 169 SDLKDYQSIFAKNLGAVAAPTASLHFSETMFENLRKKH-KIYHLTLHVGAGTFKGVECEN 227
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
+H MHSE I + ++S ++ I+ VGTT R +E SGF +
Sbjct: 228 IQEHKMHSEFFNIPQQACEIIDSKQA----ILGVGTTVTRTIEYYART----KTKSGFCD 279
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
+F+ P + L++NFHLPKSTL+MLVSAF G E+ K+Y+ AI YRFYSYGD
Sbjct: 280 LFLHPQNPPIRQNHLLTNFHLPKSTLIMLVSAFIGREQCLKLYKLAIKEKYRFYSYGDAM 339
Query: 355 LLF 357
L+
Sbjct: 340 LIL 342
>gi|33865206|ref|NP_896765.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus sp. WH 8102]
gi|46576935|sp|Q7U8E8|QUEA_SYNPX RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|33638890|emb|CAE07187.1| Queuosine biosynthesis protein [Synechococcus sp. WH 8102]
Length = 366
Score = 367 bits (943), Expect = 1e-99, Method: Composition-based stats.
Identities = 138/363 (38%), Positives = 195/363 (53%), Gaps = 18/363 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +D+ LP RIA P PR SAR+++V P +V DL L D +V
Sbjct: 7 LQLSSYDYPLPQERIAQVPAEPRHSARMLMVPPATQALEAARHGVVWDLLEELQPGDLLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L R + W ARP+K ++ GD+L
Sbjct: 67 VNNTRVLKARLKVRR-----SGGGLSELLVLEPRGEGRWLCLARPAKRMRPGDVLTI--- 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE---LERQISLVGTIPLPPYIARKRPIDARDY 177
DG S + D +G L+ F + +E ++ G +PLPPYI R P D
Sbjct: 119 DGTSIGLTVLEDDAASGGRLVQFPTDCRDAETIETLLNQWGEVPLPPYIDRHDPD---DV 175
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YA G+VAAPTAGLHF+ LL+ L G+++ +TLHVG GTF PV+ D
Sbjct: 176 ERYQTRYADRPGAVAAPTAGLHFSDELLAGLQLKGVELARITLHVGLGTFRPVETNDLTR 235
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDG-IINPWSGFTNIF 296
+HSE + A +A+ + GR+++VGTTS+R LE A ++G ++ P++G N+
Sbjct: 236 LELHSEWVEVSAAVVEAIQRCR---GRVIAVGTTSVRALEGAAQQNGGVLQPFTGPVNLV 292
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGYRF V LM+NFHLPKS+LL+LVSA G E+ +Y AI YRF+SYGD +
Sbjct: 293 IQPGYRFAVVQGLMTNFHLPKSSLLLLVSALIGREKLLAIYTEAIERNYRFFSYGDAMWI 352
Query: 357 FQK 359
+
Sbjct: 353 APE 355
>gi|114326953|ref|YP_744110.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Granulibacter bethesdensis CGDNIH1]
gi|114315127|gb|ABI61187.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Granulibacter bethesdensis CGDNIH1]
Length = 361
Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats.
Identities = 154/365 (42%), Positives = 213/365 (58%), Gaps = 22/365 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +F FDLPP RIA P PR+SARL+ V + DH + DLP L D +V
Sbjct: 6 LDIADFTFDLPPERIAHEPARPRESARLLHVPAGEEG---VHDHHIRDLPDLLRPGDVLV 62
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI AQL R + I TL+ + SW V AR ++ ++ GD L F
Sbjct: 63 ANDTRVIPAQLTAWR------GQARIGLTLNRPLPDGSWHVLARNARRLRAGDRLRFTEH 116
Query: 121 DGQSRLE-------ATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
D QS A V+ + G +L F + + ++ G + LPPYI R +
Sbjct: 117 DTQSTHTQPTGMLAAEVVARDEDGGAILRFVAE--DFDAALAQYGALALPPYIDRPQGPT 174
Query: 174 ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
A+D DYQT +A+ +G+VAAPTAGLHFT LL RL + GI+ +TLHVGAGTF+P++ +
Sbjct: 175 AQDAKDYQTVFARHRGAVAAPTAGLHFTPALLDRLAAKGIERVTITLHVGAGTFLPMRDD 234
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
+ H +H+E G I A +N+ K R+++VGTTSLRLLE+A G + P+ T
Sbjct: 235 TIEAHRLHAERGVITPEAASRINAAK----RVIAVGTTSLRLLESAADAAGGVRPFDAET 290
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
+IFI PG+RFR L++NFHLP+STL MLV AF G + Y +AI+ AYRFYSYGD
Sbjct: 291 DIFIKPGHRFRTAHALLTNFHLPRSTLFMLVCAFAGTARMRAAYAYAIAEAYRFYSYGDA 350
Query: 354 SLLFQ 358
L+ +
Sbjct: 351 CLIER 355
>gi|157414859|ref|YP_001482115.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni 81116]
gi|229598023|sp|A8FL01|QUEA_CAMJ8 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|157385823|gb|ABV52138.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni 81116]
gi|307747496|gb|ADN90766.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni M1]
Length = 342
Score = 366 bits (941), Expect = 2e-99, Method: Composition-based stats.
Identities = 130/363 (35%), Positives = 190/363 (52%), Gaps = 31/363 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+++ +D+ L IA P P++ ARL+V I +L FL N AI
Sbjct: 5 LLLSSYDYTLANELIANYPTNPKEDARLLVFDRK---NKEIFHTTFKNLQDFL-PNCAIF 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMR-VSPNSWSVYARPSKVIKKGDILHFFS 119
FN+TKVI A++ G + +I LH ++ ++ A+ +KK +IL+F
Sbjct: 61 FNDTKVIKARIYGNKVS-----GGKIELFLHQPFLNSHNPLFLAQIKGRVKKDEILYFKK 115
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELE-----RQISLVGTIPLPPYIARKRPIDA 174
L+ V++ N G + F + L+ + +G IPLPPYI KR +
Sbjct: 116 D-----LKIRVVELLNDGLRKVQFFQNDKTLDTSNLYNLLDKIGHIPLPPYI--KREDEK 168
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D DYQ+ +AK G+VAAPTA LHF+ +L L ++Y +TLHVGAGTF V+ E+
Sbjct: 169 SDLKDYQSIFAKNLGAVAAPTASLHFSETMLENLRKKH-EIYHLTLHVGAGTFKSVECEN 227
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
+H MHSE I + ++S ++ I+ VGTT R +E SGF +
Sbjct: 228 IQEHKMHSEFFNIPQQACEIIDSKQA----ILGVGTTVTRTIEYYART----KTKSGFCD 279
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
+F+ P + L++NFHLPKSTL+MLVSAF G E+ K+Y+ AI YRFYSYGD
Sbjct: 280 LFLHPQNPPIRQNHLLTNFHLPKSTLIMLVSAFIGREQCLKLYELAIKEKYRFYSYGDAM 339
Query: 355 LLF 357
L+
Sbjct: 340 LIL 342
>gi|305431668|ref|ZP_07400837.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter coli JV20]
gi|304445263|gb|EFM37907.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter coli JV20]
Length = 341
Score = 366 bits (941), Expect = 2e-99, Method: Composition-based stats.
Identities = 130/363 (35%), Positives = 189/363 (52%), Gaps = 31/363 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+++ +D+ LP IA PV P++ A+L+V IS +L FL + A+
Sbjct: 4 LLLSSYDYTLPNELIATYPVHPKEDAKLLVFE---QKNNQISHTTFKNLQDFL-PDCALF 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMR-VSPNSWSVYARPSKVIKKGDILHFFS 119
FN+TKVI A++ G + +I LH + A+ +KK +IL F
Sbjct: 60 FNDTKVIKARIYGNKSS-----GGKIELFLHQPCLDSQDSLFLAQIKGRVKKDEILSF-- 112
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIEL-----ERQISLVGTIPLPPYIARKRPIDA 174
+ L+A VI+ + G + F + L + +G +PLPPYI KR +
Sbjct: 113 ---EQNLKAKVIELLDDGLRKVQFFQNDEVLNTFKLYELLDTIGHVPLPPYI--KRSDEK 167
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D DYQ+ +AK G+VAAPTA LHF+ N+L L ++Y +TLHVGAGTF V+ E+
Sbjct: 168 SDLEDYQSIFAKNLGAVAAPTASLHFSENMLENLKKRH-EIYHLTLHVGAGTFKSVECEN 226
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
++H +HSE I + ++S K +I+ VGTT R +E GF +
Sbjct: 227 LENHKIHSEFFDIPKKACEVIDSQK----KILGVGTTVTRTIEYYART----KQNQGFCD 278
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
+F+ P D L++NFHLPKSTL+MLVSAF G + K+Y AI YRFYSYGD
Sbjct: 279 LFLHPHNPPLRQDYLLTNFHLPKSTLIMLVSAFIGRQNCLKLYDIAIKEKYRFYSYGDAM 338
Query: 355 LLF 357
L+
Sbjct: 339 LIL 341
>gi|206889691|ref|YP_002248710.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Thermodesulfovibrio yellowstonii DSM 11347]
gi|226713854|sp|B5YKE5|QUEA_THEYD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|206741629|gb|ACI20686.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Thermodesulfovibrio yellowstonii DSM 11347]
Length = 345
Score = 366 bits (941), Expect = 2e-99, Method: Composition-based stats.
Identities = 134/366 (36%), Positives = 194/366 (53%), Gaps = 30/366 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + E ++ LP IA +P+ RD +RL+V+H N I + ++ +LN D ++
Sbjct: 1 MKITELNYTLPTDLIAQKPLSERDKSRLLVLHKNTG---EIEHRIFYEIVEYLNEGDILI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS----WSVYARPSKVIKKGDILH 116
NNTKVI A+L + +I L +S W V + S
Sbjct: 58 INNTKVIPARLIAEKPS-----GGKIEILLIKEKKCSSQNVVWEVMTKGS---------- 102
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
+ + A + + + G ++ +++ ++ I+ G +PLPPYI RK D
Sbjct: 103 YEGEVFIDEFIAELRNNCD-GRYIVFKNMTSPKVRNLINEKGFMPLPPYIKRK--PIQSD 159
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
DYQT YAK+ GS+AAPTAGLHFT LL +IS G+K+ +TLHVG GTF P+KV+
Sbjct: 160 RQDYQTVYAKMNGSIAAPTAGLHFTKELLETIISKGVKLREITLHVGVGTFKPIKVDKLQ 219
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN-----PWSG 291
+H M E ID + + ++K G RI SVGTT+ R LE + G
Sbjct: 220 EHKMDPEYFEIDKTLIEEIYAIKKAGKRIFSVGTTTTRALEGYASGKYEDRGSDNYKIKG 279
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T+IFI P + F+ VD L++NFHLPKST L +V AFC +++ KK Y+ AI YRF+SYG
Sbjct: 280 STDIFIYPEFSFKIVDALITNFHLPKSTPLAMVYAFCEMQKVKKAYREAIEKGYRFFSYG 339
Query: 352 DTSLLF 357
D L+
Sbjct: 340 DAMLII 345
>gi|283955989|ref|ZP_06373478.1| LOW QUALITY PROTEIN: S-adenosylmethionine:tRNA
ribosyltransferase-isomerase [Campylobacter jejuni
subsp. jejuni 1336]
gi|283792465|gb|EFC31245.1| LOW QUALITY PROTEIN: S-adenosylmethionine:tRNA
ribosyltransferase-isomerase [Campylobacter jejuni
subsp. jejuni 1336]
Length = 342
Score = 366 bits (941), Expect = 2e-99, Method: Composition-based stats.
Identities = 128/363 (35%), Positives = 189/363 (52%), Gaps = 31/363 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+++ +D+ L IA P P++ ARL+V I +L FL N AI
Sbjct: 5 LLLSSYDYTLANELIANYPANPKEDARLLVFDRK---NKEIFHTTFKNLQDFL-PNCAIF 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMR-VSPNSWSVYARPSKVIKKGDILHFFS 119
FN+TKVI A++ G + +I LH ++ ++ A+ +KK +IL+F
Sbjct: 61 FNDTKVIKARIYGNKAS-----GGKIELFLHQPFLNSHNPLFLAQIKGRVKKDEILYFRE 115
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELE-----RQISLVGTIPLPPYIARKRPIDA 174
L+ V++ + G + F + L+ + +G IPLPPYI KR +
Sbjct: 116 D-----LKVRVVELLDDGLRKVQFFQNDKTLDTSNLYNLLDKIGHIPLPPYI--KREDEK 168
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D DYQ+ +AK G+VAAPTA LHF+ +L L ++Y +TLHVGAGTF V+ E+
Sbjct: 169 SDLKDYQSIFAKNLGAVAAPTASLHFSETMLENLRKKH-EIYHLTLHVGAGTFKSVECEN 227
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
H MHSE I + ++S ++ I+ VGTT R +E +GF +
Sbjct: 228 IQKHKMHSEFFNIPQQACEIIDSKQA----ILGVGTTVTRTIEYYART----KTKNGFCD 279
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
+F+ P + L++NFHLPKSTL+MLVSAF G E+ K+Y+ AI YRFYSYGD
Sbjct: 280 LFLHPQNPPIRQNHLLTNFHLPKSTLIMLVSAFIGREQCLKLYELAIKEKYRFYSYGDAM 339
Query: 355 LLF 357
L+
Sbjct: 340 LIL 342
>gi|283853697|ref|ZP_06370927.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfovibrio sp. FW1012B]
gi|283570907|gb|EFC18937.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Desulfovibrio sp. FW1012B]
Length = 368
Score = 366 bits (940), Expect = 3e-99, Method: Composition-based stats.
Identities = 137/366 (37%), Positives = 191/366 (52%), Gaps = 21/366 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ + FDLP RIA RP RD+ RLM V+ + D + +DLP L +V
Sbjct: 14 LLAAYHFDLPEDRIANRPCARRDACRLMTVNRATGA---VGDAVFADLPDLLPEGALLVA 70
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN---SWSV-----YARPSKVIKKGD 113
NNTKV +L G + ++ +R + + W+ R S+ + GD
Sbjct: 71 NNTKVAPVRLLGRKPTGGAAEFLLVTPIALLRATTDPATGWTSAPAAGLLRVSRPPRPGD 130
Query: 114 ILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID 173
+ F L T + G +V S G L + +G +PLPPYI +R D
Sbjct: 131 RIDFAPD-----LCITATRRGAFGHTEVVLSWQG-SLPAVMDRIGHVPLPPYI--RRADD 182
Query: 174 ARDYVDYQTTYA--KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK 231
A D YQT YA GS AAPTAGLHFT +LL RL + G VT HVG GTF PV+
Sbjct: 183 AADRETYQTVYASDDKLGSAAAPTAGLHFTEDLLERLRARGFGFATVTCHVGIGTFSPVR 242
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSG 291
V D +H MH E + A A+ + K+ G +V+VGTT+ R LE E G + P++G
Sbjct: 243 VADIREHAMHREWIEVPQEAATAVLAAKAAGRPVVAVGTTAARTLEGVVREAGEVRPFAG 302
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T+IFI PG+ F+ VD +++NFHLP S+L+++++A G E Y AI+ YRF+SYG
Sbjct: 303 ETDIFIRPGHAFQVVDGMVTNFHLPGSSLVIMLAALVGRENLLAAYARAIASGYRFFSYG 362
Query: 352 DTSLLF 357
D L
Sbjct: 363 DAMLAL 368
>gi|57238227|ref|YP_178692.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni RM1221]
gi|81557544|sp|Q5HVJ3|QUEA_CAMJR RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|57167031|gb|AAW35810.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni RM1221]
gi|315057991|gb|ADT72320.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni S3]
Length = 342
Score = 366 bits (939), Expect = 4e-99, Method: Composition-based stats.
Identities = 129/363 (35%), Positives = 189/363 (52%), Gaps = 31/363 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+++ +D+ L IA P P++ ARL+V I +L FL N AI
Sbjct: 5 LLLSSYDYTLANELIANYPTNPKEDARLLVFDRK---NKEIFHTTFKNLQDFL-PNCAIF 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMR-VSPNSWSVYARPSKVIKKGDILHFFS 119
FN+TKVI A++ G + +I LH ++ + A+ +KK +IL+F
Sbjct: 61 FNDTKVIKARIYGNKAS-----GGKIELFLHQPFLNSHDPLFLAQIKGRVKKDEILYFKD 115
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELE-----RQISLVGTIPLPPYIARKRPIDA 174
L+ V++ N G + F + L+ + +G IPLPPYI KR +
Sbjct: 116 D-----LKVRVVELLNDGLRKVQFFQNDKTLDTSNLYNLLDKIGHIPLPPYI--KREDEK 168
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D DYQ+ +AK G+VAAPTA LHF+ +L L ++Y +TLHVGAGTF V+ E+
Sbjct: 169 SDLKDYQSIFAKNLGAVAAPTASLHFSETMLENLRKKH-EIYHLTLHVGAGTFKSVECEN 227
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
+H MHSE I + ++S ++ I+ VGTT R +E +GF +
Sbjct: 228 IQEHKMHSEFFNIPQQACEIIDSKQA----ILGVGTTVTRTIEYYART----KTKNGFCD 279
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
+F+ P + L++NFHLPKSTL+MLVSAF G E+ K+Y+ AI YRFYSYGD
Sbjct: 280 LFLHPQNPPIRQNHLLTNFHLPKSTLIMLVSAFIGREQCLKLYELAIKEKYRFYSYGDAM 339
Query: 355 LLF 357
L+
Sbjct: 340 LIL 342
>gi|262195614|ref|YP_003266823.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase [Haliangium
ochraceum DSM 14365]
gi|262078961|gb|ACY14930.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase [Haliangium
ochraceum DSM 14365]
Length = 368
Score = 366 bits (939), Expect = 4e-99, Method: Composition-based stats.
Identities = 129/381 (33%), Positives = 187/381 (49%), Gaps = 39/381 (10%)
Query: 1 MMV-KEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAI 59
M + ++ FDLP +IA P RD + L D D+ L ++ +
Sbjct: 1 MRLRSDYHFDLPDGQIAQLPSAQRDDS----RLLLLRAGAAAEDRGFRDIIDLLPADAVL 56
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVS----PNSWSVYARPSKVIKKGDIL 115
V N+T+V+ A+L + + RV W R SK +++G L
Sbjct: 57 VVNDTRVLPARLRARKHS-----GGAVELLFLERVEVRGVSEQWRCMGRSSKPLREGAQL 111
Query: 116 HFFSQDGQSRL------EATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARK 169
+ D + L + ++ G +L+ + G L + G +PLPPYIAR
Sbjct: 112 RVLASDAEGVLAETGDTVSIAGERGEDGTLLVDIAGDGRLL---LERAGELPLPPYIARP 168
Query: 170 RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
+ D YQT +A+ G+VAAPTAGLHFT +L L + G + +TLHVG GTF+P
Sbjct: 169 EGPETLDSERYQTIFARAPGAVAAPTAGLHFTPAILDALQAKGAAIAPLTLHVGPGTFLP 228
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET----------- 278
V+ E+ H MH E + TA + + G +V+VGTT +R LE+
Sbjct: 229 VRTEEIAAHHMHLERYEVPETTAALV----ASGRPVVAVGTTCVRALESAARAAARDQDR 284
Query: 279 -ATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMY 337
+ G T++FITPGYRFRAVD +++NFHLP+STLLMLV AF G Y
Sbjct: 285 DRDDGARRLAVGPGQTDLFITPGYRFRAVDWMVTNFHLPESTLLMLVCAFAGYRRVLDSY 344
Query: 338 QHAISHAYRFYSYGDTSLLFQ 358
+HA+ YRF+SYGD L+ +
Sbjct: 345 RHAVDAGYRFFSYGDAMLVER 365
>gi|205355427|ref|ZP_03222198.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni CG8421]
gi|205346661|gb|EDZ33293.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni CG8421]
Length = 342
Score = 366 bits (939), Expect = 4e-99, Method: Composition-based stats.
Identities = 131/363 (36%), Positives = 191/363 (52%), Gaps = 31/363 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+++ +D+ L IA P P++ ARL+V I +L FL N AI
Sbjct: 5 LLLSSYDYTLANELIANYPTNPKEDARLLVFDRK---NKEIFHTTFKNLQDFL-PNCAIF 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMR-VSPNSWSVYARPSKVIKKGDILHFFS 119
FN+TKVI A++ G + +I LH ++ ++ A+ IKK +IL+F
Sbjct: 61 FNDTKVIKARIYGNKAS-----GGKIELFLHQPFLNSHNPLFLAQIKGRIKKDEILYFKD 115
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELE-----RQISLVGTIPLPPYIARKRPIDA 174
L+ V++ N G + F + L+ + +G IPLPPYI KR +
Sbjct: 116 D-----LKVRVVELLNDGLRKVQFFQNDKTLDTSNLYNLLDKIGHIPLPPYI--KREDEK 168
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D DYQ+ +AK G+VAAPTA LHF+ +L L ++Y +TLHVGAGTF V+ E+
Sbjct: 169 SDLKDYQSIFAKNLGAVAAPTASLHFSETMLENLRKKH-EIYHLTLHVGAGTFKSVECEN 227
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
+H MHSE I + ++S ++ I+ VGTT R +E T +GF +
Sbjct: 228 IQEHKMHSEFFNIPQQACEIIDSKQA----ILGVGTTVTRTIEYYTRT----KTKNGFCD 279
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
+F+ P + L++NFHLPKSTL+MLVSAF G E+ K+Y+ AI YRFYSYGD
Sbjct: 280 LFLHPQNPPIRQNHLLTNFHLPKSTLIMLVSAFIGREQCLKLYELAIKEKYRFYSYGDAM 339
Query: 355 LLF 357
L+
Sbjct: 340 LIL 342
>gi|86149907|ref|ZP_01068136.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni CF93-6]
gi|88597013|ref|ZP_01100249.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni 84-25]
gi|218562228|ref|YP_002344007.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni NCTC 11168]
gi|21263926|sp|Q9PHT9|QUEA_CAMJE RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|85839725|gb|EAQ56985.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni CF93-6]
gi|88190702|gb|EAQ94675.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni 84-25]
gi|112359934|emb|CAL34723.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni NCTC 11168]
gi|284925838|gb|ADC28190.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni IA3902]
gi|315927313|gb|EFV06657.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni DFVF1099]
gi|315928649|gb|EFV07936.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni 305]
Length = 342
Score = 365 bits (938), Expect = 5e-99, Method: Composition-based stats.
Identities = 131/363 (36%), Positives = 191/363 (52%), Gaps = 31/363 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+++ +D+ L IA P P++ ARL+V I +L FL N AI
Sbjct: 5 LLLSSYDYTLANELIANYPTNPKEDARLLVFDRK---NKEIFHTTFKNLQDFL-PNCAIF 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMR-VSPNSWSVYARPSKVIKKGDILHFFS 119
FN+TKVI A++ G + +I LH ++ ++ A+ IKK +IL+F
Sbjct: 61 FNDTKVIKARIYGNKAS-----GGKIELFLHQPFLNSHNPLFLAQIKGRIKKDEILYFKE 115
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELE-----RQISLVGTIPLPPYIARKRPIDA 174
L+ V++ N G + F + L+ + +G IPLPPYI KR +
Sbjct: 116 D-----LKVRVVELLNDGLRKVQFFQNDKTLDTSNLYNLLDKIGHIPLPPYI--KREDEK 168
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D DYQ+ +AK G+VAAPTA LHF+ +L L ++Y +TLHVGAGTF V+ E+
Sbjct: 169 SDLKDYQSIFAKNLGAVAAPTASLHFSETMLENLRKKH-EIYHLTLHVGAGTFKSVECEN 227
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
+H MHSE I + ++S ++ I+ VGTT R +E T +GF +
Sbjct: 228 IQEHKMHSEFFNIPQQACEIIDSKQA----ILGVGTTVTRTIEYYTRT----KTKNGFCD 279
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
+F+ P + L++NFHLPKSTL+MLVSAF G E+ K+Y+ AI YRFYSYGD
Sbjct: 280 LFLHPQNPPIRQNHLLTNFHLPKSTLIMLVSAFIGREQCLKLYELAIKEKYRFYSYGDAM 339
Query: 355 LLF 357
L+
Sbjct: 340 LIL 342
>gi|205374301|ref|ZP_03227100.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
coahuilensis m4-4]
Length = 322
Score = 365 bits (938), Expect = 5e-99, Method: Composition-based stats.
Identities = 121/306 (39%), Positives = 173/306 (56%), Gaps = 17/306 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDF LP IA P+ R +RLMV+ I + D+ L+ D +V
Sbjct: 1 MKVEDFDFYLPEELIAQTPLEERSKSRLMVIDKITGD---IKHRVFEDILYDLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L GV+ ++ C L + + W +P+K +K G +L F
Sbjct: 58 LNDTRVLPARLYGVK----EETGAKVECLLLKQEEGDEWETLIKPAKRVKVGTVLTF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL+A + + + G ++ F GI + +G +PLPPYI D Y
Sbjct: 111 -GDGRLKAECVAEKDHGGRMMRFIYDGI-FYEVLEELGEMPLPPYIRE----TLDDRDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +AK +GS AAPTAGLHFT +LL ++ G+ + F+TLHVG GTF PV VE ++H M
Sbjct: 165 QTVFAKERGSAAAPTAGLHFTEDLLKKIGEKGVHIAFITLHVGLGTFRPVSVESIEEHDM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITP 299
H+E + TA+ LN VK RGGRI++VGTTS R LET ++ DG + SG+T+IFI P
Sbjct: 225 HAEFYQMTEGTARLLNEVKERGGRIITVGTTSTRTLETIASKYDGEFHEESGWTDIFIYP 284
Query: 300 GYRFRA 305
GY F+
Sbjct: 285 GYEFKR 290
>gi|187250918|ref|YP_001875400.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
[Elusimicrobium minutum Pei191]
gi|186971078|gb|ACC98063.1| S-Adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Elusimicrobium minutum Pei191]
Length = 341
Score = 365 bits (937), Expect = 6e-99, Method: Composition-based stats.
Identities = 130/350 (37%), Positives = 189/350 (54%), Gaps = 27/350 (7%)
Query: 15 IALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGV 74
IA P PRDSA+LMV++ + I + D+ + D +V N+TKV A+L
Sbjct: 12 IARTPATPRDSAKLMVLNRD---GQKIEHRIFRDISQYFTPGDCLVINDTKVFPAKLFAK 68
Query: 75 RFCHINRREKEISCTLHMRVS-PNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDK 133
+ ++ L + PN W+ R K+G L F L+A + +
Sbjct: 69 KP-----TGGKVEVLLVRPLEKPNEWTALMRD---YKEGIELSFSED-----LKAVMDFR 115
Query: 134 WNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID------ARDYVDYQTTYAKI 187
GE++L F+ ++ G +PLP YI + R D D YQT YA+
Sbjct: 116 NENGEVILKFNND--DVLGYACENGLMPLPQYIEKARKHDGLSASIETDKERYQTVYAQF 173
Query: 188 QGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFI 247
QGS+AAPTAG HFT LL ++ G+K+ VTLH+G GTF P+K D +H M +E G +
Sbjct: 174 QGSIAAPTAGFHFTPELLKKIEDKGVKIARVTLHIGWGTFKPLKT-DPKEHKMLAEYGTV 232
Query: 248 DAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVD 307
++ +N ++ GGRI SVGTTS R LE+ TE+GI +T++FI PGY+F+A+D
Sbjct: 233 SEEASKKINEARASGGRIFSVGTTSTRTLESF-TENGITKSGGRWTDLFIYPGYKFKAID 291
Query: 308 ILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
L++NFH P ST L + SAF + K Y A+ + YRFYS+GD+ L+
Sbjct: 292 CLITNFHFPDSTPLCMASAFASEDFIFKAYNEAVENNYRFYSFGDSMLIL 341
>gi|116071115|ref|ZP_01468384.1| queuosine biosynthesis protein [Synechococcus sp. BL107]
gi|116066520|gb|EAU72277.1| queuosine biosynthesis protein [Synechococcus sp. BL107]
Length = 364
Score = 365 bits (937), Expect = 8e-99, Method: Composition-based stats.
Identities = 134/359 (37%), Positives = 195/359 (54%), Gaps = 18/359 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +D+ LPP RIA PV PR ARL++ + V +L L D +V
Sbjct: 8 QLSSYDYHLPPERIAQAPVEPRHDARLLISPGQADGVRAVRHQKVWNLLEELRPGDLLVV 67
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L R + W ARP+K ++ GD+L +
Sbjct: 68 NDTRVLKARLKVRRSGGGAS-----ELLVLEPRGEGQWLCLARPAKRMRPGDLLTI---E 119
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIE---LERQISLVGTIPLPPYIARKRPIDARDYV 178
G + + + +G ++ F + + +E ++ G +PLPPYI R P DA
Sbjct: 120 GTAITLRVLHEDPASGGRIVQFPLDCRDAESIEALLNQCGEVPLPPYIDRHDPADA---E 176
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YA G+VAAPTAGLHF+ LL+ L G+ + +TLHVG GTF PV+ ED
Sbjct: 177 RYQTRYADRPGAVAAPTAGLHFSDELLAGLQRKGVGLARITLHVGLGTFRPVETEDLTQL 236
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-EDGIINPWSGFTNIFI 297
+HSE ++A +A+ + GR+++VGTTS+R LE A + G++ P++G N+ I
Sbjct: 237 ELHSEWIEVNASVVEAIQQCR---GRVIAVGTTSVRALEGAAQLQGGVLKPFTGPVNLVI 293
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGYRF V L++NFHLPKS+LL+LVSA G E+ +Y AI H YRF+SYGD +
Sbjct: 294 QPGYRFAVVQGLLTNFHLPKSSLLLLVSALIGREKLLALYAEAIDHEYRFFSYGDAMWI 352
>gi|154175322|ref|YP_001408005.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter curvus 525.92]
gi|112803352|gb|EAU00696.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter curvus 525.92]
Length = 343
Score = 364 bits (936), Expect = 8e-99, Method: Composition-based stats.
Identities = 128/360 (35%), Positives = 192/360 (53%), Gaps = 31/360 (8%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +D+DLP IA PV P++ ARL+V I DL + + A+VFN
Sbjct: 10 ISSYDYDLPKELIANEPVLPKEQARLLVYFRQTGN---IEHLKFKDLCELIPGDTAVVFN 66
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKVI A++ G + R L+ + +S Y + + G IL F
Sbjct: 67 DTKVIKARILGHK-----RSGGACEVMLNQPLGDAKFSCYVK--GRVSAGKILEFADG-- 117
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELE-----RQISLVGTIPLPPYIARKRPIDARDY 177
+ A +++ + G ++ FS +G+ L+ +++ +G IPLPPYI KR D
Sbjct: 118 ---VSAEILELNSDGTRIVEFSKNGVSLDTAMLFKELEKIGHIPLPPYI--KRADTKEDE 172
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQ+ +A G+VAAPTA LHF+ ++L R+ + + ++TLHVGAGTF V+ ED
Sbjct: 173 SWYQSVFAAHSGAVAAPTASLHFSEDMLKRIKAKH-ESAYLTLHVGAGTFKGVECEDIRS 231
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H+MHSE I T + +NS K +I+ VGTT R +E SGF +F+
Sbjct: 232 HVMHSEFYEIPQDTQELINSDK----KILGVGTTVTRCVEEFARSKNA----SGFCKLFL 283
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ L++NFHLPKSTL+MLV++F G++ET ++Y+ AI YRFYSYGD L+
Sbjct: 284 NLNNPPIRQNYLLTNFHLPKSTLIMLVTSFIGLDETMRIYKAAIEEKYRFYSYGDGMLVL 343
>gi|149193933|ref|ZP_01871031.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Caminibacter mediatlanticus TB-2]
gi|149135886|gb|EDM24364.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Caminibacter mediatlanticus TB-2]
Length = 340
Score = 364 bits (936), Expect = 8e-99, Method: Composition-based stats.
Identities = 129/368 (35%), Positives = 182/368 (49%), Gaps = 43/368 (11%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND-AI 59
++V +D+DLP IA P+ PRD A+L+V I ++ F+ D
Sbjct: 5 LLVSNYDYDLPEELIAKYPITPRDEAKLLVYDRKKDK---IIHTKFKNILDFV--GDKRF 59
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
+FN+TKVI A++ G + + L+ + + +K+G L F
Sbjct: 60 IFNDTKVIKARIFGKKES-----GGRVELLLNRPFNND---FLVYIRGKVKRGTKLFF-- 109
Query: 120 QDGQSRLEATVIDKWNTGEIL----LVFSI------SGIELERQISLVGTIPLPPYIARK 169
L A V + G + L EL + +G IPLPPYI RK
Sbjct: 110 ---DRGLVAEVKELLEDGSRVVDFKLRMEYGEWKILDFYELVNILEEIGHIPLPPYIKRK 166
Query: 170 RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
+ D +YQT +AK +G+VAAPTA LHFT NLL ++ ++TLHVGAGTF P
Sbjct: 167 --DEEIDEKEYQTIFAKKEGAVAAPTASLHFTKNLLDKIEKK----AYLTLHVGAGTFKP 220
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPW 289
V+VED H MHSE I TA+ L IV+VGTT+ R +E
Sbjct: 221 VEVEDIRFHKMHSEFFEIPKNTAEIL----DSNEEIVAVGTTATRTIEYYART----KKL 272
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
G +F+ P V+ L++NFHLPKSTL+MLV++F G ++T ++Y+ A YRFYS
Sbjct: 273 KGECGLFLNPLNPPIRVNHLITNFHLPKSTLIMLVASFIGRKKTLEIYEIAKKEKYRFYS 332
Query: 350 YGDTSLLF 357
YGD L+
Sbjct: 333 YGDAMLII 340
>gi|219682063|ref|YP_002468447.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Buchnera
aphidicola str. Tuc7 (Acyrthosiphon pisum)]
gi|254764270|sp|B8D737|QUEA_BUCAT RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|219621796|gb|ACL29952.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Buchnera
aphidicola str. Tuc7 (Acyrthosiphon pisum)]
gi|311085876|gb|ADP65958.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Buchnera
aphidicola str. LL01 (Acyrthosiphon pisum)]
gi|311086446|gb|ADP66527.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Buchnera
aphidicola str. TLW03 (Acyrthosiphon pisum)]
Length = 357
Score = 364 bits (936), Expect = 9e-99, Method: Composition-based stats.
Identities = 132/362 (36%), Positives = 202/362 (55%), Gaps = 16/362 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F FDLP S I+ P F R + RLMV++ + +I ++ +NS D I+
Sbjct: 1 MQLSDFSFDLPKSLISFHPYFIRSTCRLMVMYGHTG---MIFHKRFFNIIDEINSGDLII 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+ G + ++ + + N+ + SK I G + F +
Sbjct: 58 LNNTQVIPARFFGKKES-----GGKVEVLVEKILGINNILASIKNSKNINIGSKIFFGYK 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D +++ +V+D N+ + ++ I+ +G IPLPPYI R R + D Y
Sbjct: 113 D---KIKGSVVDCKNSFFEIFFHDNIDSAID-IINNIGEIPLPPYIKRFR--NKLDVDLY 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y K GS+AAPTAGLHF LL L + G+ + ++TLH+G+GTF P++ ++HIM
Sbjct: 167 QTVYKKKTGSIAAPTAGLHFDLPLLEALHNKGVDIDYITLHIGSGTFQPIRRVQIEEHIM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + + Q + S K +GGRI++VGT++LR LE+A ++E + TNIFI
Sbjct: 227 HSESVEVSSSVIQKIKSCKKKGGRIIAVGTSTLRALESAYHSSEWSDSKDFISDTNIFIY 286
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY+ VD L++NFH P+STL+MLV +F G + T Y AI + Y F+SYGD +
Sbjct: 287 PGYKHNIVDALITNFHFPESTLIMLVCSFLGYKNTMNAYNTAIVNKYSFFSYGDAMYITH 346
Query: 359 KR 360
+
Sbjct: 347 NK 348
>gi|219681507|ref|YP_002467892.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Buchnera
aphidicola str. 5A (Acyrthosiphon pisum)]
gi|257471188|ref|ZP_05635187.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Buchnera
aphidicola str. LSR1 (Acyrthosiphon pisum)]
gi|254764269|sp|B8D8T3|QUEA_BUCA5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|219624350|gb|ACL30505.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Buchnera
aphidicola str. 5A (Acyrthosiphon pisum)]
Length = 357
Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats.
Identities = 131/362 (36%), Positives = 199/362 (54%), Gaps = 16/362 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F FDLP S I+ P F R + RLMV++ + +I ++ +NS D I+
Sbjct: 1 MQLSDFSFDLPKSLISFHPYFIRSTCRLMVMYGHTG---MIFHKRFFNIIDEINSGDLII 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+ G + ++ + + N+ + SK I G + F +
Sbjct: 58 LNNTQVIPARFFGKKES-----GGKVEVLVEKILGINNILASIKNSKNINIGSKIFFGYK 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D +++ +V+D N+ + ++ I+ +G IPLPPYI R R + D Y
Sbjct: 113 D---KIKGSVVDCKNSFFEIFFHDNIDSAID-IINNIGEIPLPPYIKRFR--NKLDVDLY 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y K GS+AAPTAGLHF LL L + G+ + ++TLH+G+GTF P++ ++HIM
Sbjct: 167 QTVYKKKTGSIAAPTAGLHFDLPLLEALHNKGVDIDYITLHIGSGTFQPIRRVQIEEHIM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI--INPWSGFTNIFIT 298
HSE + + Q + S K +GGRI++VGT++LR LE+A + TNIFI
Sbjct: 227 HSESVEVSSSVIQKIKSCKKKGGRIIAVGTSTLRALESAYRSSKWSDSKDFISDTNIFIY 286
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY+ VD L++NFH P+STL+MLV +F G + T Y AI + Y F+SYGD +
Sbjct: 287 PGYKHNIVDALITNFHFPESTLIMLVCSFLGYKNTMNAYNTAIVNKYSFFSYGDAMYITH 346
Query: 359 KR 360
+
Sbjct: 347 NK 348
>gi|15616752|ref|NP_239964.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Buchnera
aphidicola str. APS (Acyrthosiphon pisum)]
gi|11134530|sp|P57232|QUEA_BUCAI RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|25318227|pir||B84945 hypothetical protein queA [imported] - Buchnera sp. (strain APS)
gi|10038815|dbj|BAB12850.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Buchnera
aphidicola str. APS (Acyrthosiphon pisum)]
Length = 357
Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats.
Identities = 132/362 (36%), Positives = 202/362 (55%), Gaps = 16/362 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F FDLP S I+ P F R + RLMV++ + +I ++ +NS D I+
Sbjct: 1 MQLSDFSFDLPKSLISFHPYFIRSTCRLMVMYGHTG---MIFHKRFFNIIDEINSGDLII 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+VI A+ G + ++ + + N+ + SK I G + F +
Sbjct: 58 LNNTQVIPARFFGKKES-----GGKVEVLVEKILGINNILASIKNSKNINIGSKIFFGYK 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
D +++ +V+D N+ + ++ I+ +G IPLPPYI R R + D Y
Sbjct: 113 D---KIKGSVVDCKNSFFEIFFHDNIDSAID-IINNIGEIPLPPYIKRFR--NKLDVDLY 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y K GS+AAPTAGLHF LL L + G+ + ++TLH+G+GTF P++ ++HIM
Sbjct: 167 QTVYKKKTGSIAAPTAGLHFDLPLLEALHNKGVDIDYITLHIGSGTFQPIRRVQIEEHIM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + + Q + S K +GGRI++VGT++LR LE+A ++E + TNIFI
Sbjct: 227 HSESVEVSSSVIQKIKSCKKKGGRIIAVGTSTLRALESAYHSSEWSDSQDFISDTNIFIY 286
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY+ VD L++NFH P+STL+MLV +F G + T Y AI + Y F+SYGD +
Sbjct: 287 PGYKHNIVDALITNFHFPESTLIMLVCSFLGYKNTMNAYNTAIVNKYSFFSYGDAMYITH 346
Query: 359 KR 360
+
Sbjct: 347 NK 348
>gi|194335961|ref|YP_002017755.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Pelodictyon
phaeoclathratiforme BU-1]
gi|238693403|sp|B4SEZ1|QUEA_PELPB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|194308438|gb|ACF43138.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Pelodictyon
phaeoclathratiforme BU-1]
Length = 341
Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats.
Identities = 129/360 (35%), Positives = 187/360 (51%), Gaps = 24/360 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FD++L +IA P R S RL+V++ + + + L FL D +V
Sbjct: 1 MRTGDFDYELSEEKIAKYPPAERGSTRLLVLNRHSGA---VVHASYASLDLFLQPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L + I L + V R +KKGD L Q
Sbjct: 58 LNNTRVLRARLYASK-----STGARIELMLLEKHQEEQNRVLYR--GKLKKGDKLMAHDQ 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVD 179
E V D + G + ++ G L G +P+PPY+ KR + D
Sbjct: 111 ------ELLVTDIVDHG--IARIAVCGERSLSDLFERFGGVPIPPYL--KRDAEEVDRER 160
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A++ GSVAAPTA L+ TS LL L G+ + +TLHVG GTF+PV+ + ++H+
Sbjct: 161 YQTVFAELPGSVAAPTASLNMTSELLDTLRRKGVDMVTLTLHVGLGTFLPVRADALEEHV 220
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN---PWSGFTNIF 296
MH E I A + + VK+ GGR+++VGTT R LE A P +G +IF
Sbjct: 221 MHREYYSIPATLVEKIRKVKTTGGRVIAVGTTVTRALEHAGERMETFTGDAPLTGEADIF 280
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+FR +D L++NFH P+ST+LML +AF G + + YQ A+ YRF SYGD+ +
Sbjct: 281 IYPGYQFRIIDCLLTNFHAPRSTVLMLTAAFAGPDHLRNAYQKALEEGYRFLSYGDSMFI 340
>gi|261415143|ref|YP_003248826.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|261371599|gb|ACX74344.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|302327078|gb|ADL26279.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 348
Score = 363 bits (933), Expect = 2e-98, Method: Composition-based stats.
Identities = 123/356 (34%), Positives = 175/356 (49%), Gaps = 11/356 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +++F+ P IA R + ++ N ++ ++ D +V
Sbjct: 4 HLSDYNFEFPKELIASR-TAGKGKTHILYCPKNGGERRIM---KAPEIVDLFRPGDCLVV 59
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNTKVI A+L G + + P K + G L
Sbjct: 60 NNTKVIPARLYGETQFGGQVEVLLVQALNPSEAGEARFEAKVHPGKAFQVGRELKLA--- 116
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G V + G +L F + E+E ++ G +PLPPYI RP D D YQ
Sbjct: 117 GVRTFVEEVHE--EDGNRVLRFEKTPAEMEEVMNKEGHVPLPPYI--DRPDDEDDKKAYQ 172
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T +AK G+VAAPTA LHF+ +L L + G+ V VTLHVG GTF + VED H MH
Sbjct: 173 TIFAKYAGAVAAPTASLHFSEQMLEDLKAKGVYVAEVTLHVGPGTFQNISVEDFTQHKMH 232
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E + A +N K GGRIV+VGTTS R++ET +G + P G T F PGY
Sbjct: 233 GEHYELTKENADIINKAKREGGRIVTVGTTSTRVIETVADANGFLKPQKGVTYAFFYPGY 292
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+++ VD L++NFH PKS+L++LVSAF G E T Y+ A+ + + +SYGD L+
Sbjct: 293 KYKIVDGLLTNFHWPKSSLILLVSAFYGRENTLDAYKMAVENKLKLFSYGDGMLIL 348
>gi|78213525|ref|YP_382304.1| queuosine biosynthesis protein [Synechococcus sp. CC9605]
gi|123577715|sp|Q3AI33|QUEA_SYNSC RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|78197984|gb|ABB35749.1| queuosine biosynthesis protein [Synechococcus sp. CC9605]
Length = 366
Score = 363 bits (933), Expect = 2e-98, Method: Composition-based stats.
Identities = 140/364 (38%), Positives = 200/364 (54%), Gaps = 19/364 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +D+ LPP RIA PV PR SARL++V P + V DL L D +V
Sbjct: 7 LQLSSYDYPLPPERIAQAPVEPRHSARLLMVPPQGEPSTDAAHGQVWDLLEQLQPGDLLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L R + W ARP+K ++ GDIL
Sbjct: 67 VNDTRVLKARLAVRR-----SGGGLSELLVLEPRGEGRWLCLARPAKRMRPGDILTI--- 118
Query: 121 DGQSRLEATVI-DKWNTGEILLVFSISGIE---LERQISLVGTIPLPPYIARKRPIDARD 176
DG + + TV+ + +G L+ F + +E ++ VG +PLPPYI R D D
Sbjct: 119 DGSTSISLTVLAEDPASGGRLVQFPSDCRDAETIEGLLNDVGEVPLPPYIERH---DPSD 175
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YA G+VAAPTAGLHF+ LL+ L G+ + +TLHVG GTF PV+ ED
Sbjct: 176 SQRYQTRYADRPGAVAAPTAGLHFSDELLAGLQQKGVDLARITLHVGLGTFRPVETEDLT 235
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNI 295
+HSE + +A+ + + GR+++VGTTS+R LE A G++ P++G ++
Sbjct: 236 ALELHSEWVDVSPAVVEAVQACR---GRVIAVGTTSVRALEGAAQAHGGVLKPYTGPVDL 292
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
I PGYRF V L++NFHLPKS+LL+LVSA G E+ ++Y AI YRF+SYGD
Sbjct: 293 VIQPGYRFAVVQGLLTNFHLPKSSLLLLVSALIGREKLLELYHEAIERDYRFFSYGDAMW 352
Query: 356 LFQK 359
+ +
Sbjct: 353 IAPE 356
>gi|257439751|ref|ZP_05615506.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Faecalibacterium prausnitzii A2-165]
gi|257197771|gb|EEU96055.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Faecalibacterium prausnitzii A2-165]
Length = 274
Score = 363 bits (932), Expect = 2e-98, Method: Composition-based stats.
Identities = 114/276 (41%), Positives = 154/276 (55%), Gaps = 8/276 (2%)
Query: 82 REKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILL 141
L +V + W A+P K ++ G + F G L A V + G +
Sbjct: 7 TGAVCELLLLRQVKGDQWECLAKPGKRMQPGTKVSF----GDGTLTAVVDETLEDGNKFV 62
Query: 142 VFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFT 201
F L ++ G +PLPPYI ++ D YQT YAK GS AAPTAGLHFT
Sbjct: 63 TFYYDTETLYEKLDEFGKMPLPPYITKQ----LEDQSQYQTVYAKELGSAAAPTAGLHFT 118
Query: 202 SNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSR 261
L+ + S G+ + VTLHVG GTF PV+ ++ DH MHSE I TAQ + K+
Sbjct: 119 PELMDTIRSKGVGIAEVTLHVGLGTFRPVQEDEISDHKMHSEWYSISEETAQRIRETKAA 178
Query: 262 GGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLL 321
G R+++VGTTS R LE A + G I SG T+IF+ PG +F +D L++NFHLP+STL+
Sbjct: 179 GHRVIAVGTTSCRTLEAAAAKYGEIKACSGNTSIFLYPGVKFNCIDGLITNFHLPESTLI 238
Query: 322 MLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
MLVSA G E+T Y+ A+ YRF+S+GD L+
Sbjct: 239 MLVSALYGYEKTMAAYKVAVEEKYRFFSFGDAMLIL 274
>gi|78186439|ref|YP_374482.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Chlorobium
luteolum DSM 273]
gi|91207390|sp|Q3B5E2|QUEA_PELLD RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|78166341|gb|ABB23439.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Chlorobium
luteolum DSM 273]
Length = 341
Score = 363 bits (932), Expect = 3e-98, Method: Composition-based stats.
Identities = 128/360 (35%), Positives = 189/360 (52%), Gaps = 22/360 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD+ LP RIA P R S RL+V+ +S +L FL D +V
Sbjct: 1 MRVADFDYPLPEERIAKYPPLQRGSTRLLVICREGGT---VSHARYRELDTFLRKGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L + I L + V R +K+GD L
Sbjct: 58 LNNTRVVKARLMAEK-----STGAAIELMLLEKHGQEQSLVLFR--GRVKQGDRLR---S 107
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L ++D + + G ++ +P+PPY+ +RP + D Y
Sbjct: 108 HGHEFLVEEIVDH----GVARLSLPEGRSIQPVFEAHAEVPIPPYL--RRPAEPVDRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A+ GSVAAPTA L+ T LL RL G++ +TLHVG GTF+P++V+ ++H+M
Sbjct: 162 QTVFAEHAGSVAAPTASLNMTPELLLRLRDGGVETSSITLHVGLGTFLPIRVDSMEEHVM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPW--SGFTNIFI 297
H E I A T + + + K+ GGRI+++GTT R LE A + G P G +IFI
Sbjct: 222 HREFYSIPAATIEKIRATKASGGRIIALGTTVTRALEHAALSLSGHSGPGPLEGEADIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG FR +D L++NFH P+ST+LML +AF G + ++ Y+ A+ YRF SYGD++L+
Sbjct: 282 YPGCSFRLIDALLTNFHAPRSTVLMLTAAFAGPDLLRRAYREALDKEYRFLSYGDSTLIL 341
>gi|169830865|ref|YP_001716847.1| queuosine biosynthesis protein [Candidatus Desulforudis audaxviator
MP104C]
gi|169637709|gb|ACA59215.1| Queuosine biosynthesis protein [Candidatus Desulforudis audaxviator
MP104C]
Length = 339
Score = 362 bits (930), Expect = 4e-98, Method: Composition-based stats.
Identities = 123/357 (34%), Positives = 186/357 (52%), Gaps = 23/357 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + F++ LP IA +P PRDS+RL+V+ +S+ + S + +L D +V
Sbjct: 6 LRTELFNYHLPWELIAQQPATPRDSSRLLVMDRGSR---EVSETVFSAVVNWLEPGDVLV 62
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKV+ A+L G + ++ L + + W +P K G +L
Sbjct: 63 INDTKVMKARLFGKKP-----TGGKLEIFLLHPLGDSRWEALLKP--YPKGGVLLL---- 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ V++K +L F +E + G PLPPYI D Y
Sbjct: 112 --GDSVRVQVLEKTARSTFVLQFPTPEAAVE-AMGKWGETPLPPYIKEPLA----DQDRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT AK+ GS AAPTA LHFT LL R+ G++V TLH+G G+F P+K E DH +
Sbjct: 165 QTVLAKVHGSSAAPTAALHFTPELLQRVRDKGVQVVNFTLHMGVGSFRPIKTEYVADHNL 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
E + T A+ K +G R+V+ GT ++R LE+A + P SG+T++FITPG
Sbjct: 225 PLEFYHLPEETVVAVQQAKRQGSRVVACGTDAVRALESAALK--EFRPGSGWTDLFITPG 282
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
YRF+ VD +++N HLP S+ L+LVSAF E + Y +A+ +RF S+GD +L+
Sbjct: 283 YRFQVVDRIITNLHLPCSSHLVLVSAFASREFALQAYAYAVREKFRFLSFGDATLII 339
>gi|78184240|ref|YP_376675.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus sp. CC9902]
gi|123581889|sp|Q3AZ46|QUEA_SYNS9 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|78168534|gb|ABB25631.1| queuosine biosynthesis protein [Synechococcus sp. CC9902]
Length = 364
Score = 362 bits (930), Expect = 5e-98, Method: Composition-based stats.
Identities = 134/359 (37%), Positives = 193/359 (53%), Gaps = 18/359 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ + + LPP RIA PV PR ARL++ V DL L S D +V
Sbjct: 8 QLSSYAYHLPPERIAQAPVEPRHDARLLIAPGQTDGVQAARHQKVWDLLEELRSGDLLVV 67
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A++ R + W ARP+K ++ GD+L D
Sbjct: 68 NDTRVLKARIKVRRSGGGVS-----ELLVLEPRGDGQWLCLARPAKRMRPGDLLTL---D 119
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIE---LERQISLVGTIPLPPYIARKRPIDARDYV 178
G + + + +G ++ F + + +E ++ G +PLPPYI R D D
Sbjct: 120 GTAITLRVLHEDPASGGRIVQFPLDCRDAESIEALLNQCGEVPLPPYIDRH---DPGDAE 176
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YA G+VAAPTAGLHF+ LL+ L G+ + +TLHVG GTF PV+ ED
Sbjct: 177 RYQTRYADRPGAVAAPTAGLHFSDELLAALQGKGVGLARITLHVGLGTFRPVETEDLTQL 236
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-EDGIINPWSGFTNIFI 297
+HSE ++A +A+ + GR+++VGTTS+R LE A + G++ P++G N+ I
Sbjct: 237 ELHSEWIEVNASVVEAIQQCR---GRVIAVGTTSVRALEGAAQLQGGVLKPFTGPVNLVI 293
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGYRF V L++NFHLPKS+LL+LVSA G E+ +Y AI H YRF+SYGD +
Sbjct: 294 QPGYRFAVVQGLLTNFHLPKSSLLLLVSALIGREKLLALYAEAIDHEYRFFSYGDAMWI 352
>gi|256027761|ref|ZP_05441595.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. D11]
gi|289765718|ref|ZP_06525096.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. D11]
gi|289717273|gb|EFD81285.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. D11]
Length = 313
Score = 362 bits (929), Expect = 5e-98, Method: Composition-based stats.
Identities = 119/329 (36%), Positives = 179/329 (54%), Gaps = 16/329 (4%)
Query: 29 MVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISC 88
M+++ I ++ +L D +V N TKVI A++ G + +
Sbjct: 1 MLINRKTGS---IEHKHFYNIVDYLQKGDVLVRNATKVIPARIFGHK-----DTGGVLEI 52
Query: 89 TLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGI 148
L R++ ++W +P+K +K G L+ L A +++ G +L F
Sbjct: 53 LLIKRITLDTWECLLKPAKKLKLGQKLYIGENK---ELIAELLEIKKDGNRILKF-YHEG 108
Query: 149 ELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRL 208
E + +G++PLPPYI RK YQT YA+ SVAAPTAGLHFT LL ++
Sbjct: 109 SFEEILDKLGSMPLPPYITRKLEN----KDRYQTVYAQRGESVAAPTAGLHFTEELLKKI 164
Query: 209 ISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSV 268
+ G+++ + L VG GTF PV+ + +H MH E I A+ +N K+ G RI+SV
Sbjct: 165 LDKGVEIVDIFLEVGLGTFRPVQTVNVLEHKMHEESFEISEKAAKIINEAKTEGRRIISV 224
Query: 269 GTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFC 328
GTT+ R LE++ E+G + T IFI PGY+F+ VD L++NFHLPKSTLLMLVSAF
Sbjct: 225 GTTATRALESSVDENGKLIGQEKDTGIFIYPGYKFKIVDALITNFHLPKSTLLMLVSAFY 284
Query: 329 GIEETKKMYQHAISHAYRFYSYGDTSLLF 357
E+ ++Y A+ Y F+S+GD+ ++
Sbjct: 285 DREKMLEIYNLAVKEKYHFFSFGDSMFIY 313
>gi|260436284|ref|ZP_05790254.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus sp. WH 8109]
gi|260414158|gb|EEX07454.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus sp. WH 8109]
Length = 366
Score = 362 bits (929), Expect = 5e-98, Method: Composition-based stats.
Identities = 137/360 (38%), Positives = 196/360 (54%), Gaps = 18/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +D+ LPP RIA PV PR SARL++V P + V DL L D +V
Sbjct: 7 LQLSSYDYPLPPERIAQAPVEPRHSARLLMVPPQEEPSTDAAHGQVWDLIEQLQPGDLLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L R + W ARP+K ++ GD L
Sbjct: 67 VNDTRVLKARLAVRR-----SGGGLSELLVLEPRGEGRWLCLARPAKRMRPGDSLTI--- 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE---LERQISLVGTIPLPPYIARKRPIDARDY 177
DG S + + +G ++ F + +E ++ VG +PLPPYI R D D
Sbjct: 119 DGTSISLTVLAEDPASGGRVVQFPSDCRDAETIEGLLNDVGEVPLPPYIERH---DPSDS 175
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YA G+VAAPTAGLHF+ LL+ L G+ + +TLHVG GTF PV+ ED
Sbjct: 176 QRYQTRYADRPGAVAAPTAGLHFSDELLAGLQQKGVDLARITLHVGLGTFRPVETEDLTA 235
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIF 296
+HSE + +A+ + + GR+++VGTTS+R LE A G++ P++G N+
Sbjct: 236 LELHSEWVDVSPAVVEAVQACR---GRVIAVGTTSVRALEGAAQAHGGVLKPYTGPVNLV 292
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+F+ + L++NFHLPKS+LL+LVSA G E K+Y AI +YRF+SYGD +
Sbjct: 293 IQPGYQFKVIQALLTNFHLPKSSLLLLVSALIGRETLLKLYAEAIERSYRFFSYGDAMWI 352
>gi|153951843|ref|YP_001398182.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. doylei 269.97]
gi|152939289|gb|ABS44030.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. doylei 269.97]
Length = 343
Score = 361 bits (928), Expect = 8e-98, Method: Composition-based stats.
Identities = 129/363 (35%), Positives = 191/363 (52%), Gaps = 31/363 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+++ +D+ L IA P P++ ARL+V I +L FL N AI
Sbjct: 6 LLLSSYDYTLANELIANYPTNPKEDARLLVFDRK---NKEIFHTTFKNLQDFL-PNCAIF 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMR-VSPNSWSVYARPSKVIKKGDILHFFS 119
FN+TKVI A++ G + +I LH ++ ++ A+ +KK +IL+F
Sbjct: 62 FNDTKVIKARIYGNKAS-----GGKIELFLHQPFLNSHNPLFLAQIKGRVKKDEILYFKE 116
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELE-----RQISLVGTIPLPPYIARKRPIDA 174
L+A +++ N G + F + L+ + +G IPLPPYI KR +
Sbjct: 117 D-----LKAYIVELLNEGLRKVQFFQNDKTLDTSNLYNLLDKIGHIPLPPYI--KREDEK 169
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D DYQ+ +AK G+VAAPTA LHF+ +L L ++Y +TLHVGAGTF V+ E+
Sbjct: 170 SDLKDYQSIFAKNLGAVAAPTASLHFSEIMLENLRKKH-EIYHLTLHVGAGTFKGVECEN 228
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
+H MHSE I + ++S ++ I+ VGTT R +E +GF +
Sbjct: 229 IQEHKMHSEFFNIPKRACEIIDSKQA----ILGVGTTVTRTIEYYART----KTKNGFCD 280
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
+F+ P + L++NFHLPKSTL+MLVSAF G E+ K+Y+ AI YRFYSYGD
Sbjct: 281 LFLHPQNPPIRQNHLLTNFHLPKSTLIMLVSAFIGREQCLKLYELAIKEKYRFYSYGDAM 340
Query: 355 LLF 357
L+
Sbjct: 341 LIL 343
>gi|152992047|ref|YP_001357768.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Sulfurovum
sp. NBC37-1]
gi|151423908|dbj|BAF71411.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Sulfurovum
sp. NBC37-1]
Length = 350
Score = 361 bits (927), Expect = 1e-97, Method: Composition-based stats.
Identities = 131/362 (36%), Positives = 183/362 (50%), Gaps = 26/362 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
++ K +D++LP IA PV PRD A+L+V ++ L FL I
Sbjct: 10 LLTKNYDYELPEGFIATEPVHPRDEAKLLVYDRRNDT---VTHTTFRHLLDFLPQTCDIF 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+VI A++ G + + ++ + + + + V R +K G L F
Sbjct: 67 LNDTRVIKARIFGHKLSTDGQGGGKVELLFNKPLDAHHYLVLIR--GKVKTGTQLLF--- 121
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISG-----IELERQISLVGTIPLPPYIARKRPIDAR 175
L ATV G ++ F+ G EL + + +G IPLPPY+ +R A
Sbjct: 122 --DDSLMATVTTLNKDGSRIVTFTRHGKEIRFEELVQILDEIGHIPLPPYM--QREDKAE 177
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D DYQT +AK G+VAAPTA LHFT L L K + VTLHVGAGTF PV+ E
Sbjct: 178 DEKDYQTLFAKNAGAVAAPTASLHFTPELFETLQQRH-KTHKVTLHVGAGTFKPVEAEKI 236
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
DH MHSE I A+ L I+++GTT R +E G ++
Sbjct: 237 LDHPMHSEYFDIPPEAAKVL----DSDTEILAIGTTVTRTIEYYVRTGKT----EGECDL 288
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
F+ P + V L++NFHLPKSTL+MLVSAF G E+T ++Y+ AI YRF+SYGD L
Sbjct: 289 FLNPHNPPQRVTHLLTNFHLPKSTLIMLVSAFIGREKTLQLYKEAIEKNYRFFSYGDAML 348
Query: 356 LF 357
+
Sbjct: 349 IL 350
>gi|315637225|ref|ZP_07892445.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Arcobacter
butzleri JV22]
gi|315478497|gb|EFU69210.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Arcobacter
butzleri JV22]
Length = 340
Score = 361 bits (927), Expect = 1e-97, Method: Composition-based stats.
Identities = 129/363 (35%), Positives = 195/363 (53%), Gaps = 33/363 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +D++LP ++IA PV P DSA+L++ + + I D+ FL ND +
Sbjct: 5 LKTSSYDYNLPKNQIATYPVTPADSAKLLIFNRST---NTIIHSTFKDILEFL-PNDLSI 60
Query: 61 F-NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
F N+TKVI A++ GV+ +I L+ + + + V R ++ G L F
Sbjct: 61 FLNDTKVIKARIFGVKDS-----GGQIELLLNKPLFMDRYLVMIR--GKVRVGTKLLF-- 111
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELE-----RQISLVGTIPLPPYIARKRPIDA 174
L A V + G ++ F +L+ ++ +G +PLPPY+ R+ +
Sbjct: 112 ---DENLSAIVEEVNEDGSRIVEFFQDEKKLDFLSLVEILNKIGHLPLPPYMNRE--DEK 166
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
+D +YQT +AK G+VAAPTA LHFT LL L + ++TLHVGAGTF PV VED
Sbjct: 167 QDEQNYQTLFAKNYGAVAAPTASLHFTPELLKNLEEK-YGLNYLTLHVGAGTFKPVDVED 225
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
H MHSE I + L+ ++++VGTT R +E + I G +
Sbjct: 226 ILSHPMHSEYFEIGIDAKKNLDKA----NKVLAVGTTVTRTIEYYARTNKI----QGECD 277
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
+F+ P + VD L++NFHLPKSTL+MLV++F G+E+T ++Y+ AI YRFYSYGD
Sbjct: 278 LFLNPANKPIKVDYLLTNFHLPKSTLIMLVASFIGLEKTLEIYETAIKENYRFYSYGDGM 337
Query: 355 LLF 357
L+
Sbjct: 338 LII 340
>gi|157737500|ref|YP_001490183.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Arcobacter
butzleri RM4018]
gi|167016402|sp|A8EU90|QUEA_ARCB4 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|157699354|gb|ABV67514.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Arcobacter
butzleri RM4018]
Length = 340
Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats.
Identities = 129/363 (35%), Positives = 195/363 (53%), Gaps = 33/363 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +D++LP ++IA PV P DSA+L++ + + I D+ FL ND +
Sbjct: 5 LKTSSYDYNLPKNQIATYPVTPADSAKLLIFNRST---NTIIHSTFKDILEFL-PNDLSI 60
Query: 61 F-NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
F N+TKVI A++ GV+ +I L+ + + + V R ++ G L F
Sbjct: 61 FLNDTKVIKARIFGVKDS-----GGQIELLLNKPLFMDRYLVMIR--GKVRVGTKLLF-- 111
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELE-----RQISLVGTIPLPPYIARKRPIDA 174
L A V + G ++ F +L+ ++ +G +PLPPY+ R+ +
Sbjct: 112 ---DENLSAIVEEVDEDGSRIVEFFQDEKKLDFLSLVEILNKIGHLPLPPYMNRE--DEK 166
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
+D +YQT +AK G+VAAPTA LHFT LL L + ++TLHVGAGTF PV VED
Sbjct: 167 QDEQNYQTLFAKNYGAVAAPTASLHFTPELLKNLEEK-YGLNYLTLHVGAGTFKPVDVED 225
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
H MHSE I + L+ ++++VGTT R +E + I G +
Sbjct: 226 ILSHPMHSEYFEIGIDAKKNLDKA----NKVLAVGTTVTRTIEYYARTNKI----QGECD 277
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
+F+ P + VD L++NFHLPKSTL+MLV++F G+E+T ++Y+ AI YRFYSYGD
Sbjct: 278 LFLNPANKPIKVDYLLTNFHLPKSTLIMLVASFIGLEKTLEIYETAIKENYRFYSYGDGM 337
Query: 355 LLF 357
L+
Sbjct: 338 LII 340
>gi|254457318|ref|ZP_05070746.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacterales bacterium GD 1]
gi|207086110|gb|EDZ63394.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacterales bacterium GD 1]
Length = 342
Score = 360 bits (925), Expect = 1e-97, Method: Composition-based stats.
Identities = 128/362 (35%), Positives = 193/362 (53%), Gaps = 30/362 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
++ +DF LP IA P PRD A+L+V + I D ++ + A++
Sbjct: 6 LLTSSYDFILPDELIATHPASPRDHAKLLVYNRRT---NEIKHCHFYDFEKYIPKDCALI 62
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI A+L G + +I ++ + N+ +VY R +K + F
Sbjct: 63 FNDTKVIKARLYGHKLS-----GGKIELLINKPLDANNINVYIR--GKVKDETKILF--- 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFS-----ISGIELERQISLVGTIPLPPYIARKRPIDAR 175
LEA V+ + G ++ F + ++ I +G IPLPPYI R+ +A
Sbjct: 113 --DEDLEAVVLKLNDDGSRVVNFFQKNKLLRFEDILPIIDRIGHIPLPPYIQRE--DNAE 168
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D +YQ+ +A+ +G+VAAPTA LHFT R+ F+TLHVG+GTF PV+ +
Sbjct: 169 DASEYQSVFARQEGAVAAPTASLHFTEEQHERVCKNHDH-AFITLHVGSGTFKPVEAQTI 227
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
DH MHSE I + L+S K I+S+GTTS R +E + G N+
Sbjct: 228 TDHPMHSEYYEISNKAKELLDSDK----PILSIGTTSTRTVEFYARHKEM---QRGEANL 280
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
F+ P + V+ L++NFHLPKSTLLMLV++F G+E+ +++Y +AI + YRFYSYGD L
Sbjct: 281 FLHPNNKPIRVNYLLTNFHLPKSTLLMLVASFVGVEKAQQLYANAIKNNYRFYSYGDAML 340
Query: 356 LF 357
+
Sbjct: 341 IL 342
>gi|78778786|ref|YP_396898.1| queuosine biosynthesis protein [Prochlorococcus marinus str. MIT
9312]
gi|123554578|sp|Q31CD3|QUEA_PROM9 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|78712285|gb|ABB49462.1| queuosine biosynthesis protein [Prochlorococcus marinus str. MIT
9312]
Length = 378
Score = 360 bits (925), Expect = 2e-97, Method: Composition-based stats.
Identities = 123/360 (34%), Positives = 189/360 (52%), Gaps = 12/360 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D+ L PS IA +P R +RLM+V ++ +++ +L D +V
Sbjct: 13 KLEAYDYFLDPSLIASKPSAIRHESRLMIVRNSVLEEDCLTNKFTKNLLDEFREGDLVVV 72
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNTKV+ A+L + NR + + R W A+P+K +K L S
Sbjct: 73 NNTKVMKARL---KVELENRT--LVELLVLERSDECVWLCLAKPAKKLKINRKLKLKSPS 127
Query: 122 GQS-RLEATVIDKWNTGEILLVFSISGIELE---RQISLVGTIPLPPYIARKRPIDARDY 177
Q L +D+ TG + F + +L + G IPLPPYI ++
Sbjct: 128 EQDINLMVDGVDE-ETGGRFIKFPENITDLNSMNNLLDKYGEIPLPPYIKNSEE-ESFHE 185
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YA G+VAAPTAGLH + +L+S L G+ + +TLHVG GTF P+ ED +
Sbjct: 186 NSYQTEYAINPGAVAAPTAGLHLSKSLISNLKKKGVIILPITLHVGYGTFKPIDQEDLTN 245
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIF 296
+H E ++ + + +K RI+++GTTS+R LE+ + + P + + ++
Sbjct: 246 LKLHKEWVSVNKEVVEEIKRIKKTDRRIIAIGTTSVRALESCYSHEINDFIPIAKYVDLV 305
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+FR VD L++NFHLPKS+LL+LVSA G E +Y+ AI +RF+SYGD +
Sbjct: 306 IKPGYKFRVVDGLLTNFHLPKSSLLLLVSAMIGRERLLDLYKKAIKEKFRFFSYGDAMYI 365
>gi|318042183|ref|ZP_07974139.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus sp. CB0101]
Length = 372
Score = 360 bits (925), Expect = 2e-97, Method: Composition-based stats.
Identities = 130/362 (35%), Positives = 193/362 (53%), Gaps = 14/362 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ + FDLP + IA PV PR +ARL+VV P P DL L D +V
Sbjct: 9 RLSSYVFDLPETFIAQSPVEPRHAARLLVVDP--GQPSGCRHRTAWDLQDELKPGDLLVV 66
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNT+V+ A+L R + + + + W ARP+K +K G++L
Sbjct: 67 NNTRVLKARLQARRPSGGS-----VELLVLEPAGESDWLCLARPAKRLKPGELLQLEHHG 121
Query: 122 GQSRLEATVIDKWNTGEILLVFSISG---IELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ V TG ++ F +E ++ G++PLPPYI ++ + D
Sbjct: 122 QPAIGLEIVAIDEETGGRVVRFPEECTSPEAIETLLARYGSMPLPPYIQQQ---NDDDDT 178
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YA G+VAAPTAGLH + L++ + + G+++ VTLHVG GTF PV+ ED +
Sbjct: 179 RYQTRYASRPGAVAAPTAGLHLSDELIAAIRARGVEMAEVTLHVGLGTFRPVETEDLNQL 238
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-EDGIINPWSGFTNIFI 297
+HSE + +A+ + ++RGGR+++VGTTS+R LE G + +G N+ I
Sbjct: 239 ELHSEWVEVSPVLVEAVAACRARGGRVIAVGTTSVRSLEAVAQLHGGTLQSHAGPVNLVI 298
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGYRF V L++NFHLPKS+LL+LVSA G +Y+ A + YRF+SYGD +
Sbjct: 299 QPGYRFAVVQGLLTNFHLPKSSLLLLVSALIGRTRLLDLYEQAKAEGYRFFSYGDAMWIA 358
Query: 358 QK 359
+
Sbjct: 359 PE 360
>gi|222823668|ref|YP_002575242.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter lari RM2100]
gi|222538890|gb|ACM63991.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter lari RM2100]
Length = 342
Score = 360 bits (925), Expect = 2e-97, Method: Composition-based stats.
Identities = 133/362 (36%), Positives = 201/362 (55%), Gaps = 32/362 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+++ +D++LP IA P+ P+++A+L+V C IS DL L + I+
Sbjct: 8 LLLSSYDYNLPNELIANFPILPKENAKLLVYER---CKDQISHLHFKDLAKILPPCE-II 63
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI A++ G + +I ++ + N + V R +K+G IL+F
Sbjct: 64 FNDTKVIKARIYGNKES-----GSKIELFINHPLKNNDFLVQIR--GKVKEGQILYF--- 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIEL-----ERQISLVGTIPLPPYIARKRPIDAR 175
++ L+A + + G + F EL + +G IPLPPYI KR +A+
Sbjct: 114 --ENSLKAKIKKLHDDGTREVEFFNDEKELNHHEVFEILEKIGHIPLPPYI--KRADEAQ 169
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D ++YQ+ +AK QG+VAAPTA LHF +++ L ++ +TLHVGAGTF V+ ED
Sbjct: 170 DNINYQSIFAKNQGAVAAPTASLHFDETMINELKKNH-NIHTITLHVGAGTFKGVECEDI 228
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+H MHSE ID T ++S K +I+ VGTT R +E + GF ++
Sbjct: 229 RNHKMHSEFFHIDDETCVLIDSSK----KILGVGTTVTRCIEYYHRK----KIKEGFCDL 280
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
F+ P + +D L++NFHLPKSTL+MLV+AF G E+T K+Y AI + YRFYSYGD L
Sbjct: 281 FLHPQNTPQRLDYLLTNFHLPKSTLIMLVAAFIGREKTLKLYHEAIENNYRFYSYGDGML 340
Query: 356 LF 357
+
Sbjct: 341 II 342
>gi|72383576|ref|YP_292931.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prochlorococcus marinus str. NATL2A]
gi|91207392|sp|Q46H06|QUEA_PROMT RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|72003426|gb|AAZ59228.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase
[Prochlorococcus marinus str. NATL2A]
Length = 365
Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats.
Identities = 130/362 (35%), Positives = 194/362 (53%), Gaps = 11/362 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +++DLP IA P R A+LM+V L L + V D+ L D +V
Sbjct: 8 LLSSYNYDLPNELIAQSPTKSRHDAKLMIVKDGLDDSLNLVHAKVWDIKDILKPADLLVV 67
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNT+V+ A+L +R L W RP++ ++ GD L
Sbjct: 68 NNTRVVKARLK-IRLSG----GGAGELLLMEPRGDGRWLCLGRPARRMRGGDQLWLDMSR 122
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGI---ELERQISLVGTIPLPPYIARKRPIDARDYV 178
S + + TG ++ FS E+E + L G +PLPPYI + + D
Sbjct: 123 DNSLILKVIDKDERTGGRIIQFSNEFTSWTEMENILDLCGEVPLPPYIDKDKSSD--HEE 180
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT +A G++AAPTAGLH + L+ L + GIK+ +TLHVG GTF P++ ED
Sbjct: 181 SYQTRFASKPGAIAAPTAGLHLSDELIENLKTRGIKIAQITLHVGLGTFRPLEKEDLSQL 240
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFI 297
+HSE + T +A+ + K GG++ +VGTTS+R LE A G + P+ G ++ I
Sbjct: 241 HLHSEWIEVTEETIKAITNCKEDGGKVFAVGTTSVRALEAAYLSGRGALKPYEGKVDLVI 300
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++F +D L++NFHLPKS+LL+LVSA G + K+Y+ AIS+ YRF+SYGD L+
Sbjct: 301 KPGFKFSVIDGLLTNFHLPKSSLLLLVSALIGRKRMLKLYKQAISNKYRFFSYGDAMLIT 360
Query: 358 QK 359
+
Sbjct: 361 PE 362
>gi|187735219|ref|YP_001877331.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Akkermansia
muciniphila ATCC BAA-835]
gi|187425271|gb|ACD04550.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Akkermansia
muciniphila ATCC BAA-835]
Length = 329
Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats.
Identities = 131/357 (36%), Positives = 184/357 (51%), Gaps = 34/357 (9%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+FD+ LP IA RP+ R ++R+MV+H + +I DLP ++ D +
Sbjct: 6 RTIDFDYPLPEELIADRPLPDRSASRMMVIHRDTG---MIEHRHFCDLPEYVREGDHFIL 62
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+ + I ++P W RP + +K G +
Sbjct: 63 NDTRVVPARYFS--------NDGSIEIVRAEVLNPLLWKCMVRPGRKMKLGRTVAVGEAV 114
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G TV G L+ F E G + LP Y+ R+ D D YQ
Sbjct: 115 G------TVEGIDEEGYRLIRFDREVDE-----EKYGRLALPHYMNRE--SDPSDRERYQ 161
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
T YA+ +G++AAPTAGLHFT LL+ + F+TLHVG GTF PVK + +DH MH
Sbjct: 162 TVYARHEGAIAAPTAGLHFTPELLASV-----PHDFLTLHVGVGTFRPVKADRIEDHQMH 216
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-INPWSGFTNIFITPG 300
+E F+ + R+++VGTTS+R+LE T +G+ + SG TNIFI P
Sbjct: 217 TEHFFLPEAA----ARAVNNARRVIAVGTTSVRVLEHVATAEGLPLRECSGSTNIFIYPP 272
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y ++ VD L++NFHLP+STLLMLVSAF G E K Y AI YRF+SYGD L+
Sbjct: 273 YNYKVVDALITNFHLPQSTLLMLVSAFAGRELVMKAYLEAIRERYRFFSYGDCMLIL 329
>gi|148242891|ref|YP_001228048.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus sp. RCC307]
gi|166218752|sp|A5GUY6|QUEA_SYNR3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|147851201|emb|CAK28695.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
[Synechococcus sp. RCC307]
Length = 363
Score = 359 bits (922), Expect = 4e-97, Method: Composition-based stats.
Identities = 142/363 (39%), Positives = 201/363 (55%), Gaps = 18/363 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D++LP + IA RP+ PR +ARL++V P C D V DL L D +V
Sbjct: 9 LLSSYDYELPEACIAQRPLEPRHAARLLMVEPEAGC----RDRQVWDLLEELEPGDLLVV 64
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L R W ARP+K ++ GD + + D
Sbjct: 65 NDTRVLRARLQVRRAGGGLGELLV-----LQPQGQGQWLCLARPAKRLRPGDSIALVA-D 118
Query: 122 GQSRLEATVIDKWNT-GEILLVFSISGIE---LERQISLVGTIPLPPYIARKRPIDARDY 177
G+ L V+ + G L+ F ++ LE + G +PLPPYI ++ D D
Sbjct: 119 GEPDLPLQVLAVEESSGGRLIQFPPECVDAASLEPLLLRYGVMPLPPYIHQQ---DESDN 175
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT +A G+VAAPTAGLH + LL+ L GI+ VTLHVG GTF PV+ ED
Sbjct: 176 ARYQTCFASKPGAVAAPTAGLHLSEELLAALTQKGIERASVTLHVGLGTFRPVETEDLSQ 235
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIF 296
+HSE + QA+ + + RGGR+++VGTTS+R LE A G++ P+ G N+
Sbjct: 236 LELHSEWVEVSEALVQAVAACRKRGGRVIAVGTTSVRSLEGVAALHGGVLQPFRGPVNLV 295
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PG+RF V L++NFHLPKS+LL+LVSA G E ++YQHAI+ YRFYSYGD +
Sbjct: 296 IQPGFRFAVVQGLLTNFHLPKSSLLLLVSALIGRERLLQLYQHAITAGYRFYSYGDAMWI 355
Query: 357 FQK 359
+
Sbjct: 356 PPE 358
>gi|257461414|ref|ZP_05626510.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter gracilis RM3268]
gi|257441137|gb|EEV16284.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter gracilis RM3268]
Length = 339
Score = 359 bits (922), Expect = 4e-97, Method: Composition-based stats.
Identities = 137/361 (37%), Positives = 193/361 (53%), Gaps = 32/361 (8%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+V +D++LP IA PV P+ SARL++ I+ DL L D I+F
Sbjct: 6 LVGSYDYELPSELIASAPVMPKQSARLLIYDR---AKQQITHAHFGDLADALPPCD-IIF 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+VI A+L G + +I L+ + N +S Y R S +K G L F
Sbjct: 62 NDTRVIKARLFGHKNS-----GGKIELLLNSPLEGNKFSAYIRGS--VKVGSELKF---- 110
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGI-----ELERQISLVGTIPLPPYIARKRPIDARD 176
QS LEA V + G ++ F G ++ +G +PLPPYI KR +D
Sbjct: 111 -QSGLEARVCELMEGGLRIVQFECGGKALNTHDVFEICERIGHVPLPPYI--KRADTKQD 167
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQ+ +A+ QG+VAAPTA LHF +L+ L ++YF+TLHVGAGTF PV+V D
Sbjct: 168 VSWYQSIFAREQGAVAAPTASLHFNDAMLNDLRKRH-EIYFITLHVGAGTFKPVEVADLR 226
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+H MH E+ I T Q L S + +I+ VGTT R +E SG +F
Sbjct: 227 EHKMHGELYSIPPQTTQILKSER----KILGVGTTVTRTIENFARNG----QSSGICELF 278
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ PG + L++NFHLPKSTL+MLV++F G+E T ++Y+ A+ YRFYSYGD L+
Sbjct: 279 LHPGNPPIRQNFLLTNFHLPKSTLIMLVASFIGLERTLELYRIAVEKRYRFYSYGDGMLV 338
Query: 357 F 357
Sbjct: 339 L 339
>gi|154149256|ref|YP_001406649.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter hominis ATCC BAA-381]
gi|153805265|gb|ABS52272.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter hominis ATCC BAA-381]
Length = 340
Score = 359 bits (922), Expect = 4e-97, Method: Composition-based stats.
Identities = 136/361 (37%), Positives = 201/361 (55%), Gaps = 32/361 (8%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+V+ +D++LP IA PV P+++ARL+V + IS DL L + AI+F
Sbjct: 7 LVESYDYELPRELIANAPVMPKEAARLLVYNRANG---EISHLHFGDLAEIL-PDCAIIF 62
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKVI A++ G + +I L+ + +SVY R S +K G IL F
Sbjct: 63 NDTKVIKARIFGHKDS-----GGKIELLLNSPLGEGKFSVYVRGS--VKIGAILEF---- 111
Query: 122 GQSRLEATVIDKWNTGEILLVFS-----ISGIELERQISLVGTIPLPPYIARKRPIDARD 176
L+A +++ ++ G + FS + EL + + +G +PLPPYI KR D
Sbjct: 112 -DKNLKAEILELFDDGLRVARFSQNSHILETHELFKILDEIGHVPLPPYI--KRADTKDD 168
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT +AK +G+VAAPTA LHF+ +L+ L + +Y++TLHVGAGTF PV+V +
Sbjct: 169 ESWYQTIFAKNEGAVAAPTASLHFSDEMLADLKAKH-DIYYLTLHVGAGTFKPVEVANIK 227
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
DH MH E I TA+ L+S + I+ VGTT R +E I G +F
Sbjct: 228 DHKMHGEYYSIPERTAKLLDSERE----ILGVGTTCTRTIEFYARTHKI----GGICELF 279
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ P + L++NFHLPKSTL+MLV++F G+E+T ++Y+ A+ YRFYSYGD L+
Sbjct: 280 LHPNNPPIRQNHLLTNFHLPKSTLIMLVASFIGLEKTLELYKIAVEKKYRFYSYGDGMLI 339
Query: 357 F 357
Sbjct: 340 L 340
>gi|124025170|ref|YP_001014286.1| queuosine biosynthesis protein [Prochlorococcus marinus str.
NATL1A]
gi|166216736|sp|A2C0L1|QUEA_PROM1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|123960238|gb|ABM75021.1| Queuosine biosynthesis protein [Prochlorococcus marinus str.
NATL1A]
Length = 365
Score = 359 bits (922), Expect = 4e-97, Method: Composition-based stats.
Identities = 129/362 (35%), Positives = 195/362 (53%), Gaps = 11/362 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +++DLP IA P R A+LM++ L L + V D+ L D +V
Sbjct: 8 LLSSYNYDLPKDLIAQSPTRSRHDAKLMIIKDGLDDSLNLVHAKVWDIKDILKPADLLVV 67
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNT+V+ A+L +R + W RP++ ++ GD L +
Sbjct: 68 NNTRVVKARLK-IRLSG----GGAGELLIMEPRGDGRWLCLGRPARRMRGGDQLWLDTSR 122
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGI---ELERQISLVGTIPLPPYIARKRPIDARDYV 178
S + + TG ++ FS E+E + L G +PLPPYI + R +
Sbjct: 123 DNSLILKVIDKDEKTGGRIIQFSNEFTSWTEMENLLDLCGEVPLPPYIDKDR--SSGHEE 180
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
+YQT +A G++AAPTAGLH + L+ L GI++ +TLHVG GTF P++ ED
Sbjct: 181 NYQTRFASKPGAIAAPTAGLHLSDELIENLKIRGIRIAQITLHVGLGTFRPLEKEDLSQL 240
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFI 297
+HSE + T +A+ + K GG++ +VGTTS+R LE A G + P+ G N+ I
Sbjct: 241 HLHSEWIEVTEETIKAITTCKEEGGKVFAVGTTSVRALEAAYLSGRGALKPYEGKVNLVI 300
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PG++F +D L++NFHLPKS+LL+LVSA G K+Y+HAIS+ YRF+SYGD L+
Sbjct: 301 KPGFKFSVIDGLLTNFHLPKSSLLLLVSALIGRNRMLKLYKHAISNKYRFFSYGDAMLIT 360
Query: 358 QK 359
+
Sbjct: 361 PE 362
>gi|257457753|ref|ZP_05622914.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Treponema
vincentii ATCC 35580]
gi|257444803|gb|EEV19885.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Treponema
vincentii ATCC 35580]
Length = 354
Score = 359 bits (922), Expect = 4e-97, Method: Composition-based stats.
Identities = 131/346 (37%), Positives = 173/346 (50%), Gaps = 15/346 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M K+FDFDLP IA P R + RL+V++ ++D + SDLP FL + +V
Sbjct: 1 MFTKDFDFDLPKELIAQYPSAERGNDRLLVLNRRTGA---LTDAVFSDLPDFLPPDCLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN-SWSVYARPSKVIKKGDILHFFS 119
FNNTKV A+L E L + W + +K ++G F
Sbjct: 58 FNNTKVRHARLYAR------TGSGEAEFLLIEPLDEGFVWKTIVKRAKRQREGKEYIFDD 111
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ + + F + R + G IPLPPYI KR D
Sbjct: 112 GTRAVLIPPPSPNAAEADCKYIRFDRCIDD--RWLEANGHIPLPPYI--KRGDTDEDAER 167
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT YAK GSVAAPTAGLHFT +L L I VTLHVG GTF+PV+ E ++H
Sbjct: 168 YQTVYAKNTGSVAAPTAGLHFTEPILQELDKRHIARTAVTLHVGLGTFLPVRTEVVEEHT 227
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFIT 298
MHSE FI TA A+ I++VGTTS+R LE+A D ++ T+IFI
Sbjct: 228 MHSEKFFISDETAAAVEEAHRTEKTILAVGTTSVRTLESAWKSDTQQLSRGMHATDIFIY 287
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHA 344
PG+RF L++NFH P+S+L+MLVSAF G + Y+HAI
Sbjct: 288 PGFRFGLTGALLTNFHTPQSSLVMLVSAFAGRDNIFAAYRHAIEKN 333
>gi|301166843|emb|CBW26420.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteriovorax marinus SJ]
Length = 348
Score = 358 bits (920), Expect = 6e-97, Method: Composition-based stats.
Identities = 131/364 (35%), Positives = 192/364 (52%), Gaps = 25/364 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +DFDLP +A RP+ R +++L+V I +L +L + +V
Sbjct: 6 LTLSNYDFDLPKELVASRPIAGRHNSKLLVYKVKSG---EIIHEHFYNLANYLPEDSLLV 62
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHM--RVSPNSWSVYARPSKVIKKGDILHFF 118
N +KV +L G + + L S + + S GD F
Sbjct: 63 LNQSKVFPCRLIGKKP-----TGGKCEVFLLESYPNSNGEYKSLIKTSSKKSVGDEFFF- 116
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ L A I++ + G + S + L ++ IP+PPYI R D D
Sbjct: 117 ----EDELVAK-IERIDEGNFYI--SFNRENLAEYLNEYAKIPIPPYI-RNGESDELDKS 168
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +AK GSVAAPTAGLHFT ++ L I+ +VTLHVG GTF PVK ++ DH
Sbjct: 169 DYQTVFAKNIGSVAAPTAGLHFTEDVFKSLQEKNIERAYVTLHVGLGTFAPVKTDNLQDH 228
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWS-GFTNIF 296
MHSE FID + + S K I +VGTTSLR+LE++ E+ I T+IF
Sbjct: 229 KMHSENYFIDTENKEKILSKKE----IFAVGTTSLRVLESSHNGENFDIEANEIKETDIF 284
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ PG +++ L++NFHLPKSTLLMLVS+ G E+T ++Y+ AI++ YRF+SYGD+ L+
Sbjct: 285 LHPGVDVHSINGLITNFHLPKSTLLMLVSSLIGREKTLELYKEAIANEYRFFSYGDSMLI 344
Query: 357 FQKR 360
+ +
Sbjct: 345 LRDQ 348
>gi|254432744|ref|ZP_05046447.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cyanobium
sp. PCC 7001]
gi|197627197|gb|EDY39756.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Cyanobium
sp. PCC 7001]
Length = 392
Score = 358 bits (919), Expect = 7e-97, Method: Composition-based stats.
Identities = 140/364 (38%), Positives = 194/364 (53%), Gaps = 13/364 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +DF LP RIA RPV PR +ARL+VV P C V DL L D +V
Sbjct: 20 LKLSSYDFPLPQERIAQRPVEPRHAARLLVVDPEPDC----RHRQVWDLQQELRPGDLLV 75
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L R + + W ARP K + GD L ++
Sbjct: 76 VNDTRVLRARLQARRPSGGAVELLVLEPWTGPGAAAGQWLCLARPGKRLHPGDGLEVVAE 135
Query: 121 DGQSRLEATVIDK-WNTGEILLVFSISGI---ELERQISLVGTIPLPPYIARKRPIDARD 176
GQ L TV+ + +TG ++ F LE + G IPLPPYI P D
Sbjct: 136 -GQPPLTVTVVARDGDTGGRVIQFPPDCDHAATLEPLLVRYGAIPLPPYIHEHHP---SD 191
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YA G+VAAPTAGLH + LL+ + G+++ TLHVG GTF PV+ ED
Sbjct: 192 SDRYQTRYASRPGAVAAPTAGLHLSDELLAAIRRRGVEIATTTLHVGLGTFRPVETEDLR 251
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNI 295
+HSE + A+ + ++RGGR++++GTTS+R LE A G + P +G N+
Sbjct: 252 GLELHSEWVEVSHELVAAVQACRARGGRVIAIGTTSVRSLEGVAALHGGELKPHTGPVNL 311
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
I PG+RF V L++NFHLPKS+LL+LVSA G + +Y AI+ YRF+SYGD
Sbjct: 312 VIQPGFRFAVVQGLLTNFHLPKSSLLLLVSALLGRQRLLALYAEAIAREYRFFSYGDAMW 371
Query: 356 LFQK 359
+ +
Sbjct: 372 IAPE 375
>gi|255321392|ref|ZP_05362552.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter showae RM3277]
gi|255301545|gb|EET80802.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter showae RM3277]
Length = 342
Score = 358 bits (919), Expect = 8e-97, Method: Composition-based stats.
Identities = 128/359 (35%), Positives = 192/359 (53%), Gaps = 32/359 (8%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +D+DLPP IA P FP+++ARL+V IS DLP L D I+FN
Sbjct: 10 LDAYDYDLPPELIANFPTFPKENARLLVYER---ASEKISHLKFGDLPKILPPCD-IIFN 65
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKV+ A++ G + E L+ ++ +SVY + ++ G IL+F
Sbjct: 66 DTKVVKARIFGKKDS-----GGETELLLNSPLADAKFSVYIK--GKVRAGSILNFGEN-- 116
Query: 123 QSRLEATVIDKWNTGEILLVFSISGI-----ELERQISLVGTIPLPPYIARKRPIDARDY 177
L A V + + G + FS +G L + +S +G +PLPPYI R D D
Sbjct: 117 ---LTAEVCELFEDGSRTVKFSQNGELLDTAALYKILSHIGHVPLPPYIKRSDTKD--DE 171
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQ+ +AK +G+VAAPTA LHF+ +++RL + ++ ++TLHVGAGTF V+ ED
Sbjct: 172 SWYQSVFAKNEGAVAAPTASLHFSDEMIARL-AKDREIAYLTLHVGAGTFKGVESEDITQ 230
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+E I T + S I+ VGTT R +E SG +F+
Sbjct: 231 HKMHAEFYDIPQDTQNLIRS----NRPILGVGTTVTRCVEEFARSGKS----SGECRLFL 282
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ + L++NFHLPKSTL+MLV++F G+ +T ++Y+ A+ Y+FYSYGD L+
Sbjct: 283 NLNNKPIRQNYLLTNFHLPKSTLIMLVTSFVGLRQTMRIYKTAVEQKYKFYSYGDAMLV 341
>gi|78189254|ref|YP_379592.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Chlorobium
chlorochromatii CaD3]
gi|91207418|sp|Q3AR26|QUEA_CHLCH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|78171453|gb|ABB28549.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Chlorobium
chlorochromatii CaD3]
Length = 341
Score = 358 bits (919), Expect = 9e-97, Method: Composition-based stats.
Identities = 130/359 (36%), Positives = 190/359 (52%), Gaps = 22/359 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD+ LP RIA P R S RL+V++ ++ L + L FL + D ++
Sbjct: 1 MQVADFDYHLPEERIAKYPPLERGSTRLLVLNRQSGA---LTHSLYAHLDTFLQAGDLLL 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L R I L R V R +K G++L
Sbjct: 58 LNNTRVVPARLFATRA-----TGATIELMLLERHHHREQLVLYR--GQLKAGEMLQ---- 106
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
V + G L + G +L + + G++P+PPY+ KR +A D Y
Sbjct: 107 --SHGHTLLVEEVLPQGLARLALA-DGGDLHQFFTQFGSVPIPPYL--KRNAEAVDRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A GSVAAPTA L+ T LL RL + G+++ +TLHVG GTF+P++ E ++H+M
Sbjct: 162 QTVFAAHSGSVAAPTASLNMTPELLQRLKNNGVEIAHITLHVGLGTFLPIRTESLEEHVM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT---TEDGIINPWSGFTNIFI 297
H E + A + AL VK+ GGR+V+VGTT R LE + + G +IFI
Sbjct: 222 HRESYLLPAESVAALQRVKADGGRVVAVGTTVTRALEHSAPRILQSSAHAEIEGEADIFI 281
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGYRF+ VD+L++NFH P+ST+LML +A G + + Y A+ Y F SYGD+ L+
Sbjct: 282 YPGYRFQMVDLLLTNFHAPRSTVLMLTAACAGTDNLRAAYSEAVLQGYNFLSYGDSMLI 340
>gi|254672411|emb|CBA05734.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis alpha275]
Length = 312
Score = 358 bits (918), Expect = 1e-96, Method: Composition-based stats.
Identities = 127/313 (40%), Positives = 177/313 (56%), Gaps = 18/313 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IA P R S+RL+V P+ + + D + DLP ++ + D +V
Sbjct: 11 MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPD----MPLQDRVFGDLPDYVEAGDVLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNTKV+ A+L G + I + + ++ + R SK K G L F
Sbjct: 67 FNNTKVMKARLFGQKDS-----GGRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF--- 118
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + A ++ + GE+ + G + + G +PLPPYI +R DA D Y
Sbjct: 119 --EGGIRAVMVGR--EGELFCLRFEGGETVYELLEQNGHLPLPPYI--ERAADADDDSRY 172
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK QG+VAAPTAGLHFT LL RL G VTLHVGAGTF PV+V+ ++H M
Sbjct: 173 QTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVDKIEEHKM 232
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + + TA A+ + K+RG ++ +VGTTS+R LE+A G + G T+IFITPG
Sbjct: 233 HSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTDIFITPG 292
Query: 301 YRFRAVDILMSNF 313
YRF VD L++NF
Sbjct: 293 YRFNVVDRLVTNF 305
>gi|78777854|ref|YP_394169.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sulfurimonas denitrificans DSM 1251]
gi|91207333|sp|Q30PZ7|QUEA_SULDN RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|78498394|gb|ABB44934.1| Queuosine biosynthesis protein [Sulfurimonas denitrificans DSM
1251]
Length = 342
Score = 358 bits (918), Expect = 1e-96, Method: Composition-based stats.
Identities = 126/362 (34%), Positives = 189/362 (52%), Gaps = 30/362 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
++ +DF LP IA +P PRDSA+L+V IS D F+ N A++
Sbjct: 6 LLTSSYDFTLPEELIATQPANPRDSAKLLVYDR---ASDEISHVHFYDFEKFIPKNCALI 62
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI A+L G + +I ++ + ++ ++ +K G + F +
Sbjct: 63 FNDTKVIKARLFGQKES-----GGKIELLINRALDAHN--IHVFTRGKVKIGTKISFGLE 115
Query: 121 DGQSRLEATVIDKWNTGEIL--LVFSISGIELERQI---SLVGTIPLPPYIARKRPIDAR 175
L A +I+ G + + S + E + +G IPLPPYI R+ D
Sbjct: 116 -----LFAKIIELLEDGSRVVNFYKNDSILRFEEILPIIDKIGHIPLPPYIQREDNKD-- 168
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D ++YQ+ +AK +G+VAAPTA LHFT R+ + ++TLHVG+GTF PV+ E
Sbjct: 169 DEIEYQSVFAKEEGAVAAPTASLHFTKEQHERVCTKFTH-AYITLHVGSGTFKPVECEKI 227
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+H MHSE I + L I+SVGTTS R +E G N+
Sbjct: 228 LEHTMHSEYYDISDRAKELL----DSKVSILSVGTTSTRTIEFYARNKEH---QRGEANL 280
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
F+ P + VD +++NFHLPKSTLLMLV++F G+++ +++Y+ AI YRFYSYGD L
Sbjct: 281 FLHPKNKPLRVDHILTNFHLPKSTLLMLVASFVGVDKAQELYKIAIEKEYRFYSYGDAML 340
Query: 356 LF 357
+
Sbjct: 341 IL 342
>gi|113954197|ref|YP_729837.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus sp. CC9311]
gi|123132691|sp|Q0ICI5|QUEA_SYNS3 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|113881548|gb|ABI46506.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase(Queuosine
biosynthesis protein queA) [Synechococcus sp. CC9311]
Length = 369
Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats.
Identities = 136/362 (37%), Positives = 195/362 (53%), Gaps = 11/362 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +D+ LP RIA PV PR ARL+VV P + V D L D +V
Sbjct: 7 LQLSSYDYVLPEDRIAQAPVEPRHDARLLVVPPAERSLSELRHQRVWDWQQELQPGDLLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L R W ARP+K ++ GD L +
Sbjct: 67 VNDTRVLKARLRVRRSGGGLGELLV-----LEPRGEGRWLCLARPAKRMRPGDQLWLEAL 121
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE---LERQISLVGTIPLPPYIARKRPIDARDY 177
+ + A + + +G ++ F ++ LE + G +PLPPYI R D+ D
Sbjct: 122 EQEPLSLAVLANDAASGGRIVQFPPDCVDALSLEGLLERYGEVPLPPYITRH---DSSDQ 178
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YA G+VAAPTAGLH + LL+ + G+ + VTLHVG GTF PV+ ED D
Sbjct: 179 ERYQTRYATRPGAVAAPTAGLHLSDALLAAIAERGVALAHVTLHVGLGTFRPVETEDLSD 238
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
+HSE + A +A+ + ++RGGR+++VGTTS+R LE A G + P G ++ I
Sbjct: 239 LTLHSEWVEVRAEVVEAVLACRARGGRVIAVGTTSVRALEAAAAGGGGLQPLKGPVDLVI 298
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGYRF+ V L++NFHLPKS+LL+LVSA G ++ ++Y AI YRFYSYGD +
Sbjct: 299 QPGYRFQVVQGLLTNFHLPKSSLLLLVSALIGRDQLLQIYNAAIEEMYRFYSYGDAMWIA 358
Query: 358 QK 359
+
Sbjct: 359 PE 360
>gi|145219412|ref|YP_001130121.1| queuosine biosynthesis protein [Prosthecochloris vibrioformis DSM
265]
gi|189038873|sp|A4SDR0|QUEA_PROVI RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|145205576|gb|ABP36619.1| Queuosine biosynthesis protein [Chlorobium phaeovibrioides DSM 265]
Length = 341
Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats.
Identities = 129/360 (35%), Positives = 189/360 (52%), Gaps = 24/360 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD+ LP RIA P R + RL+V++ + + S+L AFL D +V
Sbjct: 1 MKVSDFDYSLPEERIAKYPPDNRGATRLLVLNRHTGS---VQHARYSNLEAFLGYGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKV+ A+L V+ + I L + R +KKGD L
Sbjct: 58 INTTKVVRARLFAVK-----QTGAAIELMLLEKHEGPQNLALYR--GRLKKGDRLLAHGH 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVD 179
+I + G+ + S+ GIE + +P+PPY+ KR +A D
Sbjct: 111 --------ELIVEELAGQGVARLSVEGIESVHALFQNHAEVPIPPYL--KRDAEAVDRER 160
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A+ GSVAAPTA L+ T LL +L G+ +TLHVG GTF+P++ E ++H+
Sbjct: 161 YQTVFAEHPGSVAAPTASLNMTPELLLKLEKGGVATAVMTLHVGLGTFLPIRTETMEEHV 220
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN---PWSGFTNIF 296
MH E I A T + ++ + GGR+V++GTT R LE A T + P G +IF
Sbjct: 221 MHREFYSIPARTIEQIHETRRSGGRVVALGTTVTRALEHAATRISAFSGSDPLVGEADIF 280
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY F+ +D L++NFH P+ST+LML +AF G + + Y+ A+ Y F SYGD+ L+
Sbjct: 281 IHPGYSFQTIDALLTNFHAPRSTVLMLTAAFAGADHLRAAYREAVEKRYDFLSYGDSMLI 340
>gi|83815574|ref|YP_445772.1| queuosine biosynthesis protein [Salinibacter ruber DSM 13855]
gi|294507669|ref|YP_003571727.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Salinibacter ruber M8]
gi|83756968|gb|ABC45081.1| Queuosine biosynthesis protein [Salinibacter ruber DSM 13855]
gi|294343997|emb|CBH24775.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Salinibacter ruber M8]
Length = 349
Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats.
Identities = 122/361 (33%), Positives = 188/361 (52%), Gaps = 18/361 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M EF +D+P +A P P DS+R+MV+ D DLP + + D +V
Sbjct: 1 MKRSEFSYDVPEELVAEYPADPPDSSRMMVLDRESHDIN--HDKHFHDLPEYFSEGDVLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS--WSVYARPSKVIKKGDILHFF 118
N+TKV A+L G + + +I L ++P S W V P++ I+ G+ L+F
Sbjct: 59 VNDTKVYPARLYGQK----KKTGADIQVFLLRELNPESRLWDVVVDPARKIRIGNKLYF- 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISG--IELERQISLVGTIPLPPYIARKRPIDARD 176
L A VID + + FS L ++I +G PLPPYI R ++ D
Sbjct: 114 ----DDDLIAEVIDNTTSRGRTIRFSFDDVNEALYQKIRDIGETPLPPYI--DREVEEED 167
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT +A+ +G+VAAP + LHFT ++L RL G+ V +TLH+G G PV VED
Sbjct: 168 RDRYQTIFAENRGAVAAPKSTLHFTEDVLERLKEKGVHVVPITLHIGRGKSKPVDVEDLS 227
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIV-SVGTTSLRLLETATTEDGIINPWSGFTNI 295
H SE I TA+A+N + V + GTT R LE++ + D + P +T++
Sbjct: 228 KHRTDSEEYDIPEETAEAVNRALASDENTVTACGTTVARALESSLSADETVKPDHSWTDL 287
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
F+ P Y F+ V+ +++NFH P+S L+M+ +AF G + + Y+ A YR +++GD
Sbjct: 288 FVYPEYEFKIVERMITNFHRPESMLMMMGAAFAGYDFLFEAYEEAFEEEYRLFAFGDAIF 347
Query: 356 L 356
+
Sbjct: 348 I 348
>gi|152990890|ref|YP_001356612.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Nitratiruptor sp. SB155-2]
gi|166216732|sp|A6Q446|QUEA_NITSB RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|151422751|dbj|BAF70255.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Nitratiruptor sp. SB155-2]
Length = 340
Score = 356 bits (915), Expect = 3e-96, Method: Composition-based stats.
Identities = 132/362 (36%), Positives = 191/362 (52%), Gaps = 31/362 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ V +D+ LPP IA PV P D A+L++ I+ + +LP FL IV
Sbjct: 5 LKVDSYDYHLPPHLIAKEPVQPADRAKLLIYDRKTDT---ITHTIFKNLPQFLPQKTHIV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI A++ G + +I ++ + ++V+ R +K G LHF
Sbjct: 62 FNDTKVIKARIFGHKSS-----GGKIELLINRPLENERFNVFIR--GKVKVGTTLHFSQG 114
Query: 121 DGQSRLEATVIDKWNTGEILL-----VFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
L+A V + G ++ +S EL + +G+IPLPPYI R
Sbjct: 115 -----LQAIVEELIEDGTRIVTFYHDEKRLSFHELLPILDTIGSIPLPPYI--DRAAKKE 167
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D +YQ +AK G+VAAPTA LHFT +L+ + + +FVTLHVGAGTF PV+
Sbjct: 168 DETNYQPIFAKKAGAVAAPTASLHFTEQMLNSM-AKEFPFHFVTLHVGAGTFKPVEANLI 226
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+H MHSE I T + + S ++++VGTT R +E G ++
Sbjct: 227 TEHAMHSEYYEIPKDTIEVIES----DEKVLAVGTTVTRTIEYYVRT----KKSFGECDL 278
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
F+ P + VD L++NFHLPKSTL+MLV++F G+E TK++YQ AI YRFYSYGD L
Sbjct: 279 FLNPLNPPKRVDHLLTNFHLPKSTLIMLVASFIGLETTKRVYQEAIEKEYRFYSYGDAML 338
Query: 356 LF 357
+
Sbjct: 339 IL 340
>gi|33860963|ref|NP_892524.1| queuosine biosynthesis protein [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
gi|46576939|sp|Q7V2R3|QUEA_PROMP RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|33639695|emb|CAE18865.1| Queuosine biosynthesis protein [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
Length = 374
Score = 356 bits (914), Expect = 3e-96, Method: Composition-based stats.
Identities = 120/359 (33%), Positives = 187/359 (52%), Gaps = 10/359 (2%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D+ L + IA +P R +RLM+V + ++ +L L D +V
Sbjct: 13 KLEAYDYILDETLIANKPSKVRHESRLMIVRDSSLEEDFTTNKYTKNLLDELRKGDLVVV 72
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKV+ A+L K + + + ++W ARP+K +K L+ S
Sbjct: 73 NDTKVMKARLK-----VELENGKLVELLVLEKADQSTWLCLARPAKKLKINSQLNLKSSL 127
Query: 122 GQS-RLEATVIDKWNTGEILLVFSI--SGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ +L + DK G + I + + + G PLPPYI ++
Sbjct: 128 AKDIKLHISGTDKETGGRFIKFPENINDLISMNNLLDIYGETPLPPYIKSAEE-ESFHEN 186
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YA G+VAAPTAGLH + +L+S L GI V +TLHVG GTF P+ ED +
Sbjct: 187 SYQTEYASNPGAVAAPTAGLHLSKSLISNLKKKGILVMPITLHVGYGTFKPIDQEDLSNL 246
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-EDGIINPWSGFTNIFI 297
+H E + + + + VK R++++GTTS+R LE+ + E G + P + ++ I
Sbjct: 247 KLHKEWVRVSSEVVEEIKRVKKTDRRVIAIGTTSVRALESCYSYEMGDLIPIDKYVDLVI 306
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+F+ VD L++NFHLPKS+LL+LVSA G E +Y+ AI +RF+SYGD +
Sbjct: 307 KPGYKFKVVDGLLTNFHLPKSSLLLLVSAMIGRERLLNLYKKAIREKFRFFSYGDAMYI 365
>gi|126642933|ref|YP_001085917.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acinetobacter baumannii ATCC 17978]
Length = 305
Score = 356 bits (913), Expect = 4e-96, Method: Composition-based stats.
Identities = 120/314 (38%), Positives = 166/314 (52%), Gaps = 18/314 (5%)
Query: 46 VSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARP 105
+D+ D +V N+TKV+ A+L G R I + ++ + + +
Sbjct: 2 FTDIIDLFEEGDLLVLNDTKVMKARLKGKRA-----TGGAIEILVERMLNHTTAYCHIKA 56
Query: 106 SKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPY 165
S K G L G + V + L V S L + G +P+PPY
Sbjct: 57 SNSPKAGAELFV----GADNIPVIVRGRHEN---LFVVEFSQPIL-PVLEQYGQLPIPPY 108
Query: 166 IARKRPIDARDYVDYQTTYAKIQ--GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVG 223
R+ + D YQT + + SVAAPTA LHF LL++L G+K FVTLHVG
Sbjct: 109 FNRE--AEEIDTERYQTVFHNPEKIASVAAPTASLHFDEELLAKLDQKGVKKTFVTLHVG 166
Query: 224 AGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TE 282
AGTFMPV+ +D +H+MHSE + T + + K+RG ++++VGTT+ R LE+A
Sbjct: 167 AGTFMPVRTDDITNHVMHSEWCDVPQETIDLILATKARGNKVIAVGTTATRALESAAQAH 226
Query: 283 DGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAIS 342
G I W+G T IFI PGY F VD L++NFHLP+STLLMLVSA E Y+HA+
Sbjct: 227 GGKIAAWTGDTQIFIYPGYEFCIVDRLITNFHLPESTLLMLVSALSNRENILAAYEHAVK 286
Query: 343 HAYRFYSYGDTSLL 356
YRF+SYGD L+
Sbjct: 287 DRYRFFSYGDAMLI 300
>gi|253827261|ref|ZP_04870146.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase
[Helicobacter canadensis MIT 98-5491]
gi|253510667|gb|EES89326.1| S-adenosylmethionine:tRNA ribosyltransferase- isomerase
[Helicobacter canadensis MIT 98-5491]
Length = 351
Score = 356 bits (913), Expect = 4e-96, Method: Composition-based stats.
Identities = 120/359 (33%), Positives = 183/359 (50%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
++++ +D+DLP IAL P+ P+++ARL+V I+ D FL +V
Sbjct: 9 LLLESYDYDLPKELIALNPIMPQENARLLVYDRKD---HSITHTTFRDFAKFLPKETLLV 65
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI A++ G + +I H + N + + +K G+I+ F
Sbjct: 66 FNDTKVIPARIYGKKLQKEALGGGKIEALFHKEIMENLY--LMQLKGRLKIGNIVEFVGV 123
Query: 121 DGQSRLEATVIDKWNTGEILLVF--SISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ + + K + +S E + G IPLPPYI KR + D V
Sbjct: 124 FAKILKDCGMGFKEVSFFRDEKCLLPLSRQEFFDFLEQFGHIPLPPYI--KREDNQEDRV 181
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
+Y + +AK G++AAPTA LHF L + FVTLHVGAGTF+ V E+ +H
Sbjct: 182 NYNSVFAKNVGAIAAPTASLHFNQEAFKAL-QRDFESAFVTLHVGAGTFIGVSTENILEH 240
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH E I + + + V I ++GTT+ R++E G ++F+
Sbjct: 241 KMHQETFVIPKESVEKIKKV----SHITAIGTTATRVVEYFART----KQTQGECDLFLH 292
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
P + + L++NFHLPK+TLLMLV++F G+EETK++Y+ AI YRFYSYGD L+
Sbjct: 293 PQNKPIITNALLTNFHLPKTTLLMLVASFVGLEETKRIYKQAIEEKYRFYSYGDGMLVL 351
>gi|224417922|ref|ZP_03655928.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter canadensis MIT 98-5491]
Length = 346
Score = 356 bits (913), Expect = 4e-96, Method: Composition-based stats.
Identities = 120/359 (33%), Positives = 183/359 (50%), Gaps = 18/359 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
++++ +D+DLP IAL P+ P+++ARL+V I+ D FL +V
Sbjct: 4 LLLESYDYDLPKELIALNPIMPQENARLLVYDRKD---HSITHTTFRDFAKFLPKETLLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI A++ G + +I H + N + + +K G+I+ F
Sbjct: 61 FNDTKVIPARIYGKKLQKEALGGGKIEALFHKEIMENLY--LMQLKGRLKIGNIVEFVGV 118
Query: 121 DGQSRLEATVIDKWNTGEILLVF--SISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ + + K + +S E + G IPLPPYI KR + D V
Sbjct: 119 FAKILKDCGMGFKEVSFFRDEKCLLPLSRQEFFDFLEQFGHIPLPPYI--KREDNQEDRV 176
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
+Y + +AK G++AAPTA LHF L + FVTLHVGAGTF+ V E+ +H
Sbjct: 177 NYNSVFAKNVGAIAAPTASLHFNQEAFKAL-QRDFESAFVTLHVGAGTFIGVSTENILEH 235
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH E I + + + V I ++GTT+ R++E G ++F+
Sbjct: 236 KMHQETFVIPKESVEKIKKV----SHITAIGTTATRVVEYFART----KQTQGECDLFLH 287
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
P + + L++NFHLPK+TLLMLV++F G+EETK++Y+ AI YRFYSYGD L+
Sbjct: 288 PQNKPIITNALLTNFHLPKTTLLMLVASFVGLEETKRIYKQAIEEKYRFYSYGDGMLVL 346
>gi|162447237|ref|YP_001620369.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acholeplasma laidlawii PG-8A]
gi|161985344|gb|ABX80993.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Acholeplasma laidlawii PG-8A]
Length = 282
Score = 355 bits (912), Expect = 6e-96, Method: Composition-based stats.
Identities = 123/296 (41%), Positives = 173/296 (58%), Gaps = 15/296 (5%)
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L G + I L + N+W +P+K IK G ++ F
Sbjct: 1 MNNTKVIPARLIGEKI----DTHAVIEVLLLKELEKNTWEALTKPAKKIKIGTVVSF--- 53
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+ I + G + GI LE + +GT+PLPPYI K D Y
Sbjct: 54 -GDGALKMECIGIKDEGIRIFKAIYEGIFLE-VLDALGTMPLPPYITEK----LEDKSRY 107
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL ++ + G++V +TLHVG GTF PV+V+D +H M
Sbjct: 108 QTVYAKYAGSAAAPTAGLHFTKELLEKIKAKGVQVLEITLHVGLGTFRPVQVDDVLEHQM 167
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I+ TA+ LN K G RI++VGTT++R LE+ + + + TNIFI PG
Sbjct: 168 HYESYEINEETARLLNQYKKEGKRIIAVGTTTVRTLESNYNDG--FHAGNYSTNIFIYPG 225
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y+F+ + +++NFHLPKSTL+ML+SAF E+ ++Y+ A+ YRF+S+GD+ +
Sbjct: 226 YQFKIIGAIITNFHLPKSTLIMLISAFYNREKVLEVYEDAVKKNYRFFSFGDSMFI 281
>gi|88809266|ref|ZP_01124775.1| Queuosine biosynthesis protein [Synechococcus sp. WH 7805]
gi|88787208|gb|EAR18366.1| Queuosine biosynthesis protein [Synechococcus sp. WH 7805]
Length = 374
Score = 355 bits (911), Expect = 6e-96, Method: Composition-based stats.
Identities = 133/363 (36%), Positives = 189/363 (52%), Gaps = 12/363 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+++ +D+ LP IA RPV PR +ARL++V + V D + L D +V
Sbjct: 7 LLLSAYDYQLPAECIAQRPVEPRHAARLLMVPALEESSSQVRHATVWDWQSELQPGDLLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L R W ARP+K ++ GD + +
Sbjct: 67 VNDTRVLQARLRVRRSGGGLGELLV-----LEPRGEGRWLCLARPAKKLRPGDQVWLEAL 121
Query: 121 DGQSRLEATVIDKWNTGEILLVFS---ISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+ S + +G ++ F I +E + G +PLPPYI R D D
Sbjct: 122 EQDSLPLQVLASDSASGGRIVQFPPTYNDAIAIEALLQRYGEVPLPPYITRH---DDSDQ 178
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YA G+VAAPTAGLH + +LL + + G+ + VTLHVG GTF PV+ ED D
Sbjct: 179 ERYQTRYASRPGAVAAPTAGLHLSDDLLQAIRARGVTIASVTLHVGLGTFRPVETEDLRD 238
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIF 296
+HSE + + A+ + RGGR+++VGTTS+R LE A G + P G ++
Sbjct: 239 LSLHSEWVEVSSELVAAVEACHRRGGRVIAVGTTSVRALEGAAQAGGGKLQPLKGPVDLV 298
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGYRF V L++NFHLPKS+LL+LVSA G E +Y A+ + YRFYSYGD +
Sbjct: 299 IQPGYRFSVVQGLLTNFHLPKSSLLLLVSALIGRERLLSLYAQAVENHYRFYSYGDAMWI 358
Query: 357 FQK 359
K
Sbjct: 359 APK 361
>gi|223039644|ref|ZP_03609930.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter rectus RM3267]
gi|222879027|gb|EEF14122.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter rectus RM3267]
Length = 342
Score = 355 bits (911), Expect = 7e-96, Method: Composition-based stats.
Identities = 126/360 (35%), Positives = 191/360 (53%), Gaps = 32/360 (8%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +D++LP IA P P++ ARL+V IS DLP L D I+FN
Sbjct: 10 LDAYDYELPQGLIANFPTLPKEDARLLVYER---AGEKISHLKFGDLPEILPPCD-IIFN 65
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKV+ A++ G + + E L+ ++ +SVY + ++ G IL+F
Sbjct: 66 DTKVVKARIFGKK-----QSGGETELLLNSPLADGKFSVYIK--GKVRAGSILNF----- 113
Query: 123 QSRLEATVIDKWNTGEILLVFSISG-----IELERQISLVGTIPLPPYIARKRPIDARDY 177
L A V + + G + FS +G L + +S +G +PLPPYI R D D
Sbjct: 114 SENLTAEVCELFKDGSRTVKFSQNGRLLDAAALYKILSHIGHVPLPPYIKRSDTKD--DE 171
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQ+ +AK +G+VAAPTA LHF+ +++ L + ++ ++TLHVGAGTF V+ ED
Sbjct: 172 SWYQSVFAKNEGAVAAPTASLHFSDEMIAGL-AKDREIAYLTLHVGAGTFKGVESEDITR 230
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MH+E I T +NS K ++ VGTT R +E SG +F+
Sbjct: 231 HKMHAEFYDIPQDTQNLINSDK----PLLGVGTTVTRCVEEFARSGKA----SGECRLFL 282
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
R + L++NFHLPKSTL+MLV++F G+ +T ++Y+ A+ Y+FYSYGD L+
Sbjct: 283 NLNNRPIRQNYLLTNFHLPKSTLIMLVTSFVGLRQTMRIYKTAVEQKYKFYSYGDAMLVI 342
>gi|313141463|ref|ZP_07803656.1| ribosyltransferase-isomerase [Helicobacter canadensis MIT 98-5491]
gi|313130494|gb|EFR48111.1| ribosyltransferase-isomerase [Helicobacter canadensis MIT 98-5491]
Length = 342
Score = 355 bits (911), Expect = 8e-96, Method: Composition-based stats.
Identities = 120/357 (33%), Positives = 181/357 (50%), Gaps = 18/357 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D+DLP IAL P+ P+++ARL+V I+ D FL +VFN
Sbjct: 2 LESYDYDLPKELIALNPIMPQENARLLVYDRKD---HSITHTTFRDFAKFLPKETLLVFN 58
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKVI A++ G + +I H + N + + +K G+I+ F
Sbjct: 59 DTKVIPARIYGKKLQKEALGGGKIEALFHKEIMENLY--LMQLKGRLKIGNIVEFVGVFA 116
Query: 123 QSRLEATVIDKWNTGEILLVF--SISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + + K + +S E + G IPLPPYI KR + D V+Y
Sbjct: 117 KILKDCGMGFKEVSFFRDEKCLLPLSRQEFFDFLEQFGHIPLPPYI--KREDNQEDRVNY 174
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
+ +AK G++AAPTA LHF L + FVTLHVGAGTF+ V E+ +H M
Sbjct: 175 NSVFAKNVGAIAAPTASLHFNQEAFKAL-QRDFESAFVTLHVGAGTFIGVSTENILEHKM 233
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I + + + V I ++GTT+ R++E G ++F+ P
Sbjct: 234 HQETFVIPKESVEKIKKV----SHITAIGTTATRVVEYFART----KQTQGECDLFLHPQ 285
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ + L++NFHLPK+TLLMLV++F G+EETK++Y+ AI YRFYSYGD L+
Sbjct: 286 NKPIITNALLTNFHLPKTTLLMLVASFVGLEETKRIYKQAIEEKYRFYSYGDGMLVL 342
>gi|123967993|ref|YP_001008851.1| queuosine biosynthesis protein [Prochlorococcus marinus str.
AS9601]
gi|229619923|sp|A2BPN3|QUEA_PROMS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|123198103|gb|ABM69744.1| Queuosine biosynthesis protein [Prochlorococcus marinus str.
AS9601]
Length = 374
Score = 354 bits (910), Expect = 8e-96, Method: Composition-based stats.
Identities = 118/359 (32%), Positives = 186/359 (51%), Gaps = 10/359 (2%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D+ L PS IA +P R ++RLM+V + +++ ++L D +V
Sbjct: 13 KLEAYDYLLDPSLIASKPSAIRHASRLMIVRNSFLEEDCLTNKFTNNLLDEFREGDLVVV 72
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ- 120
NNTKV+ A+L +K + + R W A+P+K +K L S
Sbjct: 73 NNTKVMKARLK-----VELENKKLVELLVLERSHECVWLCLAKPAKKLKINRKLKLKSPL 127
Query: 121 DGQSRLEATVIDKWNTGEILLVFS--ISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ + L +D+ G + + + G IPLPPYI D+
Sbjct: 128 EQEINLIVDGVDEETGGRFIKFPENITCLNSMNELLDKYGEIPLPPYIKNSEE-DSFHEK 186
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YA G+VAAPTAGLH + +L+S L G+ + +TLHVG GTF P+ ED +
Sbjct: 187 SYQTEYATNPGAVAAPTAGLHLSKSLISNLKKKGVIILPITLHVGYGTFKPIDQEDLSNL 246
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFI 297
+H E ++ + +K +I+++GTTS+R LE+ + + P + + N+ I
Sbjct: 247 KLHKEWVSVNKEVVNEIKRIKKTDRKIIAIGTTSVRALESCYSHEINDFIPIAKYVNLVI 306
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+F+ VD L++NFHLPKS+LL+LVSA G E ++Y+ AI +RF+SYGD +
Sbjct: 307 KPGYKFKVVDGLLTNFHLPKSSLLLLVSAMIGRERLLELYKKAIKEKFRFFSYGDAMYI 365
>gi|315638562|ref|ZP_07893738.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter upsaliensis JV21]
gi|315481406|gb|EFU72034.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter upsaliensis JV21]
Length = 339
Score = 354 bits (910), Expect = 9e-96, Method: Composition-based stats.
Identities = 129/362 (35%), Positives = 196/362 (54%), Gaps = 32/362 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +D+ LP IA P P+++ARL++ I+ ++L FL + AI
Sbjct: 5 LKLSNYDYFLPKELIATHPAQPKEAARLLIYEREKDK---ITHSTFANLEQFL-PDCAIF 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI A++ G + +I LH VS ++ R +KKG+ILHF
Sbjct: 61 FNDTKVIKARIYGKKES-----GGKIELFLHSSVSECEFNAQIR--GRVKKGEILHF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILL-----VFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
+ L A +++ + G + ++ +L + +G IPLPPYI KR +
Sbjct: 111 --KEGLSAEILELYADGLRKVCFKQDENLLNTPKLYALLEKIGHIPLPPYI--KRADTLK 166
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D DYQ+ +AK G+VAAPTA LHF+ +L L +++ +TLH+GAGTF V+ ED
Sbjct: 167 DTQDYQSIFAKNLGAVAAPTASLHFSEAMLKSLKKRH-EIHTITLHIGAGTFKSVECEDI 225
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+H MHSE I+ ++S K+ I+ VGTT+ R +E SG ++
Sbjct: 226 REHQMHSEFFHINEAAKACIDSKKA----ILGVGTTATRSIEYYARTGL----CSGACDL 277
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
F+ P + + L++NFHLPKSTL+MLVS+F G E+T +Y+ A+S YRFYSYGD L
Sbjct: 278 FLHPFNKPLRQNFLLTNFHLPKSTLIMLVSSFIGREKTLALYKEAVSLRYRFYSYGDAML 337
Query: 356 LF 357
+
Sbjct: 338 IL 339
>gi|32395561|gb|AAP58353.1| QueA [Pseudomonas syringae]
Length = 299
Score = 354 bits (910), Expect = 9e-96, Method: Composition-based stats.
Identities = 124/319 (38%), Positives = 175/319 (54%), Gaps = 20/319 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S+RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTLDGPTGA---LAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRSSKSPKPGSSILI--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
EA ++ + + L E+ + VG +PLPPYI RP + D Y
Sbjct: 110 --DGGGEAEMVARHDALFELRFAE----EVLPLLERVGHMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDQPLLEAIAAKGVETAFVTLHVGAGTFQPVRVEQIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
HSE + A+ + ++RGGR+V+VGTTS+R LE+A DG + P+SG T+IFI PG
Sbjct: 222 HSEWLEVGQDVVDAVAACRARGGRVVAVGTTSVRSLESAAR-DGELKPFSGDTDIFIYPG 280
Query: 301 YRFRAVDILMSNFHLPKST 319
VD L++NFHLP+ST
Sbjct: 281 RPSHVVDALVTNFHLPEST 299
>gi|224534863|ref|ZP_03675432.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
spielmanii A14S]
gi|224513803|gb|EEF84128.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
spielmanii A14S]
Length = 346
Score = 354 bits (908), Expect = 2e-95, Method: Composition-based stats.
Identities = 131/361 (36%), Positives = 190/361 (52%), Gaps = 20/361 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF F+LP S IA P R S+RLMV+ P L + ++ V+++ ++NS+ IV
Sbjct: 1 MKTKEFHFNLPYSLIAQYPSEKRGSSRLMVLDPKLQE--IYHENSVNNILKYINSDTFIV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV +++ + ++ + ++ + ++ SK G + F
Sbjct: 59 FNNSKVRKSRIYAE-----SELGSDVEFLILDKIDTDLFTALISKSKKQIVGSVYKFPEG 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L N EI+L F E G +P+PPYI KR D D Y
Sbjct: 114 LIGKILS------KNGSEIVLKFDNDVG--EDYFEKHGFVPIPPYI--KRDYDKIDEDRY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS A+ TAGLHF+ +L + I+ F+TLHVG GTF+PV+ + ++H M
Sbjct: 164 QTIYSKYVGSAASATAGLHFSRDLFTFFEKNNIEYDFITLHVGLGTFLPVRSKKVEEHNM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFITP 299
H E I A L K G +I+S+GTT+LR LE++ ++ TN+FI P
Sbjct: 224 HFETFLIKDCVADRLEKAKFLGKKILSIGTTTLRALESSYDDELKKFKTGQQSTNLFIYP 283
Query: 300 G--YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
G Y F+ VD+L +NFH P+STLLMLVSAF G + Y+ AI Y+F+SYGD L+
Sbjct: 284 GKNYCFKFVDMLFTNFHTPQSTLLMLVSAFAGKDFVFSSYEEAIKKGYKFFSYGDAMLVL 343
Query: 358 Q 358
Sbjct: 344 N 344
>gi|213023923|ref|ZP_03338370.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 289
Score = 353 bits (906), Expect = 3e-95, Method: Composition-based stats.
Identities = 115/291 (39%), Positives = 167/291 (57%), Gaps = 14/291 (4%)
Query: 69 AQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEA 128
A+L G + +I + + + R SK K G L + + A
Sbjct: 1 ARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGTELLLGDDE---SIHA 52
Query: 129 TVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQ 188
T+ + G + V + ++ +G +PLPPYI RP + D YQT Y++
Sbjct: 53 TMTARH--GALFEVEFNDPRPVLDILNAIGHMPLPPYI--DRPDEDADRELYQTVYSEKP 108
Query: 189 GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFID 248
G+VAAPTAGLHF LL+ L G+++ FVTLHVGAGTF PV+V+ +DHIMHSE +
Sbjct: 109 GAVAAPTAGLHFDEPLLAALREKGVEMAFVTLHVGAGTFQPVRVDTIEDHIMHSEYAEVP 168
Query: 249 APTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFITPGYRFRAV 306
A+ + K+RG R+++VGTTS+R LE+A + +I P+ G T IFI PGY+++ +
Sbjct: 169 QEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKSDLIEPFFGDTQIFIYPGYQYKVI 228
Query: 307 DILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 229 DALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQKYRFFSYGDAMFIT 279
>gi|94987231|ref|YP_595164.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase (queuine
synthetase) [Lawsonia intracellularis PHE/MN1-00]
gi|94731480|emb|CAJ54843.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Lawsonia intracellularis PHE/MN1-00]
Length = 366
Score = 353 bits (906), Expect = 3e-95, Method: Composition-based stats.
Identities = 134/373 (35%), Positives = 192/373 (51%), Gaps = 33/373 (8%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ + F LP ++IA P + R +RL+V+ I S + +L +N ++
Sbjct: 10 LLSSYMFSLPKTQIAQYP-YERGKSRLLVL---TKKNSTIIHTDFSKIEHYLPNNSLLIA 65
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCT-----LHMRVSP-----NSW-----SVYARPS 106
NN++V A++ FC ++R E+ L ++ +W RP+
Sbjct: 66 NNSRVFPARI----FCSYDKRNIEVFLLTPISFLEIQAKSSDEHYGAWSTAIGECLIRPA 121
Query: 107 KVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYI 166
K + G L+ Q LE V+ K + G ++ G L G IP PPYI
Sbjct: 122 KRVNIGSKLYL-----QQELEIEVLKKEDFGRHIVKLCWKG-SLSNIFFSYGDIPHPPYI 175
Query: 167 ARKRPIDARDYVDYQTTYAK--IQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
+ + +D YQT Y++ GSVAAPTAGLHF+ + ++L GI +TLHVG
Sbjct: 176 HQSNKV--QDKERYQTVYSRLDKLGSVAAPTAGLHFSETIRNKLQKNGISWAEITLHVGY 233
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDG 284
GTF PV+ D HIMHSE + T QA+ + G I ++GTT +R LE +T G
Sbjct: 234 GTFSPVRCNDIRKHIMHSEFVEVPETTVQAIKKARFEGRPIFAIGTTVVRALEGVSTICG 293
Query: 285 IINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHA 344
+ P++GF NIFI+PGY+F VD L++NFHLP STLLMLVSAF Y AI
Sbjct: 294 SLQPYTGFINIFISPGYKFSYVDGLVTNFHLPGSTLLMLVSAFTKRSIMINTYNKAIELG 353
Query: 345 YRFYSYGDTSLLF 357
YRF+SYGD L+
Sbjct: 354 YRFFSYGDAMLII 366
>gi|126695763|ref|YP_001090649.1| queuosine biosynthesis protein [Prochlorococcus marinus str. MIT
9301]
gi|229892795|sp|A3PBC3|QUEA_PROM0 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|126542806|gb|ABO17048.1| Queuosine biosynthesis protein [Prochlorococcus marinus str. MIT
9301]
Length = 374
Score = 353 bits (905), Expect = 3e-95, Method: Composition-based stats.
Identities = 116/359 (32%), Positives = 183/359 (50%), Gaps = 10/359 (2%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D+ L PS IA +P R +RLM+V + +++ +L D ++
Sbjct: 13 KLEAYDYLLDPSLIASKPSAIRHESRLMIVRNSFLEEDCLTNKFTKNLLDEFREGDLVIV 72
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNTKV+ A+L + N+ + + R W A+P+K +K L S
Sbjct: 73 NNTKVMKARL---KVELENKT--LVELLVLERSHECIWLCLAKPAKKLKINRKLKLKSPL 127
Query: 122 GQS-RLEATVIDKWNTGEILLVFS--ISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
Q L +D+ G + + + G IPLPPYI ++
Sbjct: 128 AQDINLIVDGVDEETGGRFIKFPENITCLNSMNELLDKYGEIPLPPYIKNSEE-ESFHEK 186
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YA G+VAAPTAGLH + +L+S L G+ + +TLHVG GTF P+ ED +
Sbjct: 187 SYQTEYATNPGAVAAPTAGLHLSKSLISNLKKKGVIILPITLHVGYGTFKPIDQEDLSNL 246
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFI 297
+H E ++ + + +K +I+++GTTS+R LE+ + + P + + ++ I
Sbjct: 247 KLHKEWVSVNKEVVEEIKRIKKTDRKIIAIGTTSVRALESCYSHEINDFIPIAKYVDLVI 306
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY F+ VD L++NFHLPKS+LL+LVSA G E +Y+ AI +RF+SYGD +
Sbjct: 307 KPGYEFKVVDGLLTNFHLPKSSLLLLVSAMIGRERLLDLYKKAIKEKFRFFSYGDAMYI 365
>gi|219684851|ref|ZP_03539793.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
garinii PBr]
gi|219671796|gb|EED28851.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
garinii PBr]
Length = 346
Score = 353 bits (905), Expect = 3e-95, Method: Composition-based stats.
Identities = 133/361 (36%), Positives = 192/361 (53%), Gaps = 20/361 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF F+LP S IA P R S+RLMV+ P L + ++ V+++ ++NS+ I+
Sbjct: 1 MKTKEFHFNLPYSLIAQYPSEKRGSSRLMVLDPKLQK--IYHENSVNNILKYINSDTFII 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV +++ N I + R+ + ++ SK G++ F
Sbjct: 59 FNNSKVRKSRMYAESEMGNN-----IEFLILDRIGTDLFTALISKSKKQIVGNVYKFPEG 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L N EI+L F + E G +P+PPYI KR D D Y
Sbjct: 114 LMGEILS------KNNSEIVLKFDNNVD--EDYFEKHGFVPIPPYI--KRDYDKIDEDRY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS A+ TAGLHF+ +L S I+ F+TLHVG GTF+PV+ + ++H M
Sbjct: 164 QTVYSKYVGSAASATAGLHFSRDLFSAFEKNNIEYDFITLHVGLGTFLPVRSKKVEEHNM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFITP 299
H E I+ A L + K G +I+S+GTT+LR LE++ TN+FI P
Sbjct: 224 HFETFLIENSVAARLENAKFLGKKILSIGTTTLRALESSYDNKLKKFKTGQQSTNLFIYP 283
Query: 300 G--YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
G Y F+ VD+L +NFH P+STLLMLVS+F G + Y+ AI+ Y+F+SYGD L+
Sbjct: 284 GKNYCFKFVDMLFTNFHTPQSTLLMLVSSFAGKDFVFSSYEEAINKGYKFFSYGDAMLVL 343
Query: 358 Q 358
Sbjct: 344 N 344
>gi|319956387|ref|YP_004167650.1| s-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Nitratifractor salsuginis DSM 16511]
gi|319418791|gb|ADV45901.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Nitratifractor salsuginis DSM 16511]
Length = 343
Score = 352 bits (903), Expect = 6e-95, Method: Composition-based stats.
Identities = 130/361 (36%), Positives = 183/361 (50%), Gaps = 31/361 (8%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ + +D+ LPP +IA +PV P D+AR++V I DL FL S A+
Sbjct: 9 LTQSYDYTLPPKQIATQPVEPPDAARMLVFDRRDGS---IHHARFRDLERFLPSETALFL 65
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+VI A+L G + + L+ + N + R +++G L F
Sbjct: 66 NDTRVIKARLYGTKA-----TGGRVELLLNKPLPDNEYLAMIR--GRVREGTRLSF---- 114
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELE-----RQISLVGTIPLPPYIARKRPIDARD 176
L+A V G + F EL+ + +G +PLPPY+ R+ D
Sbjct: 115 -DEGLQAEVRALLPDGARRVRFYQEDKELDFSRLVEILERIGHVPLPPYMNRE--DTPED 171
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQ+ +A+ G+VAAPTA LHFT L RL S Y +TLHVGAGTF PV+ E
Sbjct: 172 TRHYQSLFAREAGAVAAPTASLHFTPEQLERLKSTHP-CYTLTLHVGAGTFKPVESEKIL 230
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+H MHSE I A+ L +++VGTT R +E G ++F
Sbjct: 231 EHPMHSEYFRIPPEAAEYLR----GDAPLLAVGTTVTRTVEYFARTSRT----EGECDLF 282
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ PG R V+ L++NFHLPKSTL+MLVSAF G E+T ++Y+ AI YRFYSYGD L+
Sbjct: 283 LHPGNPPRRVNHLLTNFHLPKSTLIMLVSAFIGREKTLELYREAIREGYRFYSYGDAMLI 342
Query: 357 F 357
Sbjct: 343 L 343
>gi|242309356|ref|ZP_04808511.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pullorum MIT 98-5489]
gi|239523927|gb|EEQ63793.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pullorum MIT 98-5489]
Length = 347
Score = 351 bits (902), Expect = 7e-95, Method: Composition-based stats.
Identities = 116/356 (32%), Positives = 176/356 (49%), Gaps = 19/356 (5%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+D++LP IA +P+ P++ A+L+V + I D FL +VFN+T
Sbjct: 8 SYDYELPKELIATQPITPKEDAKLLVYNRKDRS---IIHSTFRDFMQFLPKETLLVFNDT 64
Query: 65 KVITAQLNGVR-FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQ 123
KVI A++ GV+ F + + +I H + N + + +K+G + F
Sbjct: 65 KVIPARIYGVKIFQNTQQEGGKIEALFHKEIGENLY--LMQFRGRLKEGSRVKFEGGIFA 122
Query: 124 SRLEATVIDKWNTGEILL--VFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
++ + + + E + G PLPPYI KR +D +Y
Sbjct: 123 KIIKDCGMGFKEASFFRIDDESPLDKQEFFGFLDSCGHTPLPPYI--KREASQQDREEYN 180
Query: 182 TTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMH 241
+ +AK G++AAPTA LHF+ +L FVTLHVGAGTF+ V VE+ +H MH
Sbjct: 181 SVFAKNLGAIAAPTASLHFSQESFQQL-QREFNNAFVTLHVGAGTFLGVSVENILEHKMH 239
Query: 242 SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGY 301
E I + Q + I ++GTT+ R +E G ++F+
Sbjct: 240 KESFIIPQESIQKIQEA----THITAIGTTAARTIEYFART----KQAQGECDLFLHLQN 291
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ D L++NFHLPK+TLLMLV++F G+EETK++YQ AI YRFYSYGD L+
Sbjct: 292 KPILTDALLTNFHLPKTTLLMLVASFVGLEETKRIYQEAIKKKYRFYSYGDGMLVL 347
>gi|296273412|ref|YP_003656043.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase [Arcobacter
nitrofigilis DSM 7299]
gi|296097586|gb|ADG93536.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase [Arcobacter
nitrofigilis DSM 7299]
Length = 345
Score = 351 bits (902), Expect = 7e-95, Method: Composition-based stats.
Identities = 124/363 (34%), Positives = 190/363 (52%), Gaps = 32/363 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ +D+ LP IA +P++P DSARL+V + N I+ L FL N I
Sbjct: 9 LKTSSYDYFLPKELIASKPLYPADSARLLVYNRNSDT---ITHTTYKYLLDFLPENLDIF 65
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A++ G + + + + + + V + ++KG L F
Sbjct: 66 LNDTKVIKARIYGKKDS-----GGKTELLFNKPLFMDRYQVMIK--GKVQKGTKLFF--- 115
Query: 121 DGQSRLEATVID-KWNTGEILLVFSISGIELE-----RQISLVGTIPLPPYIARKRPIDA 174
L A V++ G + F +L+ ++ +G +PLP Y+ R+ +
Sbjct: 116 --DENLSAEVLELNNEDGTRTVKFFKDEKQLDFLSLIDILNKIGHLPLPHYMNRE--DEK 171
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D DYQT +AK G+VAAPTA LHFT LL +L + + ++TLHVGAGTF PV ED
Sbjct: 172 EDEKDYQTLFAKNYGAVAAPTASLHFTDELLEKLHNKH-NINYLTLHVGAGTFKPVDAED 230
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
+H MHSE I + +AL + ++VGTT R +E + I G +
Sbjct: 231 ILNHPMHSEYFEISRESLEAL----KEKNKTLAVGTTVTRTIEYYARTNKI----QGECD 282
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
+F+ P + VD L++NFHLPKSTL+ML+++F G+E+T ++Y+ A+ YRF+SYGD
Sbjct: 283 LFLNPANKPIKVDHLLTNFHLPKSTLIMLIASFVGLEKTLEIYETAVKDKYRFFSYGDGM 342
Query: 355 LLF 357
L+
Sbjct: 343 LII 345
>gi|57242389|ref|ZP_00370328.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter upsaliensis RM3195]
gi|57017069|gb|EAL53851.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter upsaliensis RM3195]
Length = 339
Score = 351 bits (902), Expect = 8e-95, Method: Composition-based stats.
Identities = 126/362 (34%), Positives = 195/362 (53%), Gaps = 32/362 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +D+ LP IA P P+++ARL++ ++ ++L FL + AI
Sbjct: 5 LQLSNYDYTLPKELIATHPAQPKEAARLLIYEREKD---RVTHSTFANLEQFL-PDCAIF 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI A++ G + +I LH VS ++ R +KKG+ILHF
Sbjct: 61 FNDTKVIKARIYGTKES-----GGKIELFLHSSVSECEFNAQIR--GKVKKGEILHF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILL-----VFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
+ L A +++ + G + ++ L + +G IPLPPYI KR +
Sbjct: 111 --KEGLSAKILELYADGLRKVCFKQDENLLNTPTLYALLEKIGHIPLPPYI--KRADTLK 166
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D DYQ+ +AK G+VAAPTA LHF+ +L L +++ +TLH+GAGTF V+ ED
Sbjct: 167 DTQDYQSIFAKNLGAVAAPTASLHFSEAMLESLKKRH-EIHTITLHIGAGTFKSVECEDI 225
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
+H MHSE I+ ++S K+ I+ VGTT+ R +E SG ++
Sbjct: 226 REHQMHSEFFHINQVAKACIDSKKA----ILGVGTTATRSIEYYARTGL----CSGACDL 277
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
F+ P + + L++NFHLPKSTL+MLVS+F G ++T +Y+ A++ YRFYSYGD L
Sbjct: 278 FLHPFNKPLRQNFLLTNFHLPKSTLIMLVSSFIGRKKTLALYKEAVTLRYRFYSYGDAML 337
Query: 356 LF 357
+
Sbjct: 338 IL 339
>gi|203283951|ref|YP_002221691.1| S-adenosylmethionine-tRNA ribosyltransferase-isomerase (queuine
synthetase) [Borrelia duttonii Ly]
gi|201083394|gb|ACH92985.1| S-adenosylmethionine-tRNA ribosyltransferase-isomerase (queuine
synthetase) [Borrelia duttonii Ly]
Length = 352
Score = 351 bits (901), Expect = 9e-95, Method: Composition-based stats.
Identities = 131/360 (36%), Positives = 189/360 (52%), Gaps = 20/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF FDLP IA P R A+LMV+ C + V+D+ ++ SN +V
Sbjct: 7 METKEFYFDLPHHLIAQYPSERRGLAKLMVLD--SICQKIYHTDSVNDILKYIGSNTFLV 64
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+++V +++ + + + R++ ++++ +K K G + F
Sbjct: 65 FNDSRVRKSRIYAK-----TDYDGNVEFLILNRLTGDTFTSLISKAKRQKVGKVYRFPQD 119
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A +I K + + E G IPLPPYI KR D D Y
Sbjct: 120 -----LSAQIISKLDNEFTIKFNRYVD---ESYFEQYGFIPLPPYI--KRDYDKEDEDRY 169
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS A+ TAGLHF+ L S+ I+ F+TLHVG GTF+PV+ + + H M
Sbjct: 170 QTIYSKYIGSSASATAGLHFSEELFSKFAQNNIEYDFITLHVGLGTFLPVRTKTIEKHKM 229
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-EDGIINPWSGFTNIFITP 299
H E I A L KS G +I++VGTT+LR LE+A + G TN+FI P
Sbjct: 230 HFESFSIRDSVACRLERAKSLGKKILAVGTTTLRALESAYDKQKGRFTRGEQKTNLFIYP 289
Query: 300 G--YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
G Y+F++VD+L +NFH P+STLLMLVS+F G + Y+ A++ YRF+SYGD +L
Sbjct: 290 GKNYKFKSVDMLFTNFHTPESTLLMLVSSFGGKDFVFNAYREAVTMNYRFFSYGDATLFL 349
>gi|83309697|ref|YP_419961.1| S-adenosylmethionine tRNA-ribosyltransferase-isomerase
[Magnetospirillum magneticum AMB-1]
gi|82944538|dbj|BAE49402.1| S-adenosylmethionine tRNA-ribosyltransferase-isomerase
[Magnetospirillum magneticum AMB-1]
Length = 291
Score = 351 bits (901), Expect = 1e-94, Method: Composition-based stats.
Identities = 153/300 (51%), Positives = 199/300 (66%), Gaps = 12/300 (4%)
Query: 59 IVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
+VFN+TKVI A+L G R + TLH R + W +ARP+K +K GD + F
Sbjct: 1 MVFNDTKVIPARLLGRR------GLAGVELTLHQRTGLSQWKAFARPAKKLKPGDRVDFA 54
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
A V +K GE+ L F SG +L + G +PLPPYI R+ D RD
Sbjct: 55 EG-----FSAVVAEKGEMGEVTLDFDRSGEDLMVALETHGHLPLPPYI-RQGTADERDKG 108
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
DYQT +A+ +G+VAAPTAGLHFT LL+ L + G+K VTLHVGAGTF+PVKV+DTDDH
Sbjct: 109 DYQTVFAREKGAVAAPTAGLHFTPELLAALDARGVKRVTVTLHVGAGTFLPVKVDDTDDH 168
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
MH EIG + TA A+N+ ++ GGR+V+VGTTS RLLE+A G ++P+ G T+IFIT
Sbjct: 169 RMHQEIGVVTPETAAAVNAARAAGGRVVAVGTTSARLLESAADPLGTLHPFDGATDIFIT 228
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PG+ FR VD+L++NFHLP+STL ML+SAF G+E K Y+HA + YRFYSYGD LL +
Sbjct: 229 PGHVFRQVDVLLTNFHLPRSTLFMLISAFAGLERMKAAYEHAKAAGYRFYSYGDCCLLER 288
>gi|91070343|gb|ABE11260.1| queuosine biosynthesis protein [uncultured Prochlorococcus marinus
clone HF10-88F10]
Length = 374
Score = 351 bits (900), Expect = 1e-94, Method: Composition-based stats.
Identities = 116/359 (32%), Positives = 183/359 (50%), Gaps = 10/359 (2%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D+ L PS IA +P R +RLM+V + +++ +L D ++
Sbjct: 13 KLEAYDYLLDPSLIASKPSAIRHESRLMIVRNSFLEEDCLTNKFTKNLLDEFREGDLVIV 72
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNTKV+ A+L + N+ + + R W A+P+K +K L S
Sbjct: 73 NNTKVMKARL---KVELENKT--LVELLVLERSHECVWLCLAKPAKKLKINRKLKLKSPL 127
Query: 122 GQS-RLEATVIDKWNTGEILLVFS--ISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
Q L +D+ G + + + G IPLPPYI ++
Sbjct: 128 AQDINLIVDGVDEETGGRFIKFPENITCLNSMNELLDKYGEIPLPPYIKNSEE-ESFHEK 186
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YA G+VAAPTAGLH + +L+ L G+ + +TLHVG GTF P+ ED +
Sbjct: 187 SYQTEYATNPGAVAAPTAGLHLSKSLIFNLKKKGVIILPITLHVGYGTFKPIDQEDLSNL 246
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-EDGIINPWSGFTNIFI 297
+H E ++ + + +K +I+++GTTS+R LE+ + E P + + ++ I
Sbjct: 247 KLHKEWVSVNKEVVEEIKRIKKTDRKIIAIGTTSVRALESCYSYEIDDFIPIAKYVDLVI 306
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+F+ VD L++NFHLPKS+LL+LVSA G E +Y+ AI +RF+SYGD +
Sbjct: 307 KPGYKFKVVDGLLTNFHLPKSSLLLLVSAMIGRERLLNLYKKAIKEKFRFFSYGDAMYI 365
>gi|51598284|ref|YP_072472.1| S-adenosylmethionine: tRNA ribosyltransferase-isomerase [Borrelia
garinii PBi]
gi|81610282|sp|Q662Z1|QUEA_BORGA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|51572855|gb|AAU06880.1| S-adenosylmethionine: tRNA ribosyltransferase-isomerase [Borrelia
garinii PBi]
Length = 346
Score = 351 bits (900), Expect = 1e-94, Method: Composition-based stats.
Identities = 133/361 (36%), Positives = 192/361 (53%), Gaps = 20/361 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF F+LP S IA P R S+RLMV+ P L + ++ V+++ ++NS+ I+
Sbjct: 1 MKTKEFHFNLPYSLIAQYPSEKRGSSRLMVLDPKLQK--IYHENSVNNILKYINSDTFII 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV +++ N I + R+ + ++ SK G++ F
Sbjct: 59 FNNSKVRKSRMYAESELGNN-----IEFLILDRIGTDLFTALISKSKKQIVGNVYKFPEG 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L N EI+L F + E G +P+PPYI KR D D Y
Sbjct: 114 LMGEILS------KNNSEIVLKFDNNVD--EDYFEKHGFVPIPPYI--KRDYDKIDEDRY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS A+ TAGLHF+ +L S I+ F+TLHVG GTF+PV+ + ++H M
Sbjct: 164 QTVYSKYVGSAASATAGLHFSRDLFSTFEKNNIEYDFITLHVGLGTFLPVRSKKVEEHNM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFITP 299
H E I+ A L + K G +I+S+GTT+LR LE++ TN+FI P
Sbjct: 224 HFETFLIEDCVATRLENAKFLGKKILSIGTTTLRALESSYDNKLKKFKTGQQSTNLFIYP 283
Query: 300 G--YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
G Y F+ VD+L +NFH P+STLLMLVS+F G + Y+ AI+ Y+F+SYGD L+
Sbjct: 284 GKNYCFKFVDMLFTNFHTPQSTLLMLVSSFAGKDFVFSSYEEAINKGYKFFSYGDAMLVL 343
Query: 358 Q 358
Sbjct: 344 N 344
>gi|194477169|ref|YP_002049348.1| Queuosine biosynthesis protein [Paulinella chromatophora]
gi|171192176|gb|ACB43138.1| Queuosine biosynthesis protein [Paulinella chromatophora]
Length = 373
Score = 350 bits (899), Expect = 2e-94, Method: Composition-based stats.
Identities = 128/363 (35%), Positives = 198/363 (54%), Gaps = 17/363 (4%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ + F LP IA P PR +AR+++V V DL L +ND ++
Sbjct: 9 QLSSYSFQLPKEHIAQIPAEPRHNARMLMVPLLGQKSN---HGRVWDLINQLQTNDLLIV 65
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNTKV+ A+L + + L + +W A+PSK+ + G ++ +
Sbjct: 66 NNTKVLRAKL-----IVKSESGPKGELLLLESLGRGTWLCLAKPSKIFQPGKQVNIEAL- 119
Query: 122 GQSRLEATVIDKWN-TGEILLVFSISGIELER---QISLVGTIPLPPYIARKRPIDARDY 177
G+ L ++D TG L++F + + G IP+PPYI ++ ID
Sbjct: 120 GKPPLAIKILDIDKSTGGRLVLFPTHFDNFNSIAPLLEIYGNIPMPPYITKQNCIDD--- 176
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YA G+VAAPTAGLHF+ +LS L I + VTLH+G GTF P++ E+ ++
Sbjct: 177 ERYQTRYADKVGAVAAPTAGLHFSDEMLSALYKKNIHIAKVTLHIGLGTFRPIRQENLEE 236
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-EDGIINPWSGFTNIF 296
+H+E I T A+ S +++GGR++++GTT++R LE ++ +G + P+ G NI
Sbjct: 237 LKLHTEWVEISRETVNAVKSCQTKGGRVIAIGTTTVRALEGSSQLNNGELKPFIGPVNIV 296
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+F+ VD L +NFH P S+LL +VSAF G + ++YQ AI YRF+SYGD+ +
Sbjct: 297 IKPGYQFKVVDALFTNFHFPDSSLLFMVSAFIGRVQLLQLYQEAIGLGYRFFSYGDSMWI 356
Query: 357 FQK 359
+
Sbjct: 357 SPQ 359
>gi|203287494|ref|YP_002222509.1| S-adenosylmethionine-tRNA ribosyltransferase-isomerase (queuine
synthetase) [Borrelia recurrentis A1]
gi|201084714|gb|ACH94288.1| S-adenosylmethionine-tRNA ribosyltransferase-isomerase (queuine
synthetase) [Borrelia recurrentis A1]
Length = 352
Score = 350 bits (899), Expect = 2e-94, Method: Composition-based stats.
Identities = 131/360 (36%), Positives = 189/360 (52%), Gaps = 20/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF FDLP IA P R A+LMV+ C + V+D+ ++ SN +V
Sbjct: 7 METKEFYFDLPHHLIAQYPSERRGLAKLMVLD--SICQKIYHTDSVNDILKYIGSNTFLV 64
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+++V +++ + + + R++ ++++ +K K G + F
Sbjct: 65 FNDSRVRKSRIYAK-----TDYDGNVEFLILNRLTGDTFTSLISKAKRQKVGKVYRFPQD 119
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A +I K + + E G IPLPPYI KR D D Y
Sbjct: 120 -----LSAQIISKLDNEFTIKFNRYVD---ESYFEQYGFIPLPPYI--KRDYDKEDEDRY 169
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS A+ TAGLHF+ L S+ I+ F+TLHVG GTF+PV+ + + H M
Sbjct: 170 QTIYSKYIGSSASATAGLHFSEELFSKFAQNNIEYDFITLHVGLGTFLPVRTKTIEKHKM 229
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-EDGIINPWSGFTNIFITP 299
H E I A L KS G +I++VGTT+LR LE+A + G TN+FI P
Sbjct: 230 HFESFSIRDSVACRLERAKSLGKKILAVGTTTLRALESAYDKQKGRFTRGEQKTNLFIYP 289
Query: 300 G--YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
G Y+F++VD+L +NFH P+STLLMLVS+F G + Y+ A++ YRF+SYGD +L
Sbjct: 290 GKNYKFKSVDMLFTNFHTPESTLLMLVSSFGGKDFVFDAYREAVTMNYRFFSYGDATLFL 349
>gi|89099002|ref|ZP_01171882.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
sp. NRRL B-14911]
gi|89086406|gb|EAR65527.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
sp. NRRL B-14911]
Length = 269
Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats.
Identities = 110/283 (38%), Positives = 149/283 (52%), Gaps = 16/283 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V+ FDF LP IA P+ R S+RLMV+ + +LP +LN D +V
Sbjct: 1 MKVEMFDFHLPEELIAQTPLEDRTSSRLMVLDKEDGA---LQHETFKNLPEYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + +I L + + W +P+K +K+G + F
Sbjct: 58 LNDTRVLPARLFGAK----EGTGAKIEVLLLKQQEGDVWETLIKPAKRVKEGTRIEF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L A G LL F+ GI + +G +PLPPYI + D Y
Sbjct: 111 -GDGLLSAVCTGTEEQGGRLLKFNYEGI-FYEVLEQLGEMPLPPYIKEQLD----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK +GS AAPTAGLHFT LL + G+ + F+TLHVG GTF PV VED +H M
Sbjct: 165 QTVYAKERGSAAAPTAGLHFTEELLDEIREKGVHIAFITLHVGLGTFRPVSVEDIHEHSM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED 283
H+E + TA+ LN V+ GGRI++VGTTS R LET +
Sbjct: 225 HAEYYQVTEGTARLLNEVRENGGRIITVGTTSTRTLETIADAN 267
>gi|313681725|ref|YP_004059463.1| s-adenosylmethionine/ tRNA-ribosyltransferase-isomerase
[Sulfuricurvum kujiense DSM 16994]
gi|313154585|gb|ADR33263.1| S-adenosylmethionine/ tRNA-ribosyltransferase-isomerase
[Sulfuricurvum kujiense DSM 16994]
Length = 340
Score = 349 bits (897), Expect = 3e-94, Method: Composition-based stats.
Identities = 126/362 (34%), Positives = 182/362 (50%), Gaps = 31/362 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
++ +++ LP IA P+ PRD ARL+V + + I+ L +FL N I+
Sbjct: 5 LLTSSYEYTLPEELIATHPIHPRDHARLLVYNRSDKT---ITHARFDALESFLPENCGII 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI A+L G + L + +++++ +K G IL F
Sbjct: 62 FNDTKVIKARLYGKKESGGA-------IELLINRPHDAYAINVYIKGRVKTGTILLF--- 111
Query: 121 DGQSRLEATVIDKWNTGEIL--LVFSISGIELERQI---SLVGTIPLPPYIARKRPIDAR 175
L A VI + G + I E + +G IPLPPY+ R D+
Sbjct: 112 --DDTLHAKVIQLHDDGSREVNFYHHENLIRFEELLPILEKIGHIPLPPYL--GREDDSE 167
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
D +YQ+ +A +G+VAAPTA LHFT L + S FVTLHVG+GTF PV+ E
Sbjct: 168 DEREYQSVFAHHEGAVAAPTASLHFTDELFDAVCSSHPH-AFVTLHVGSGTFKPVEAEVI 226
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
DH MHSE I + S ++ +GTTS R +E G N+
Sbjct: 227 TDHPMHSEYFHISTDAQNLIRS----DLPLLCIGTTSTRTVEYHVRA----KETQGEANL 278
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
F+ P ++ L++NFHLP+STLLMLV++F G+EET ++Y+ AI YRF+SYGD L
Sbjct: 279 FLHPNNPPLRINHLLTNFHLPQSTLLMLVASFVGLEETHRIYREAIDQNYRFFSYGDAML 338
Query: 356 LF 357
+
Sbjct: 339 IL 340
>gi|297181292|gb|ADI17484.1| s-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [uncultured beta proteobacterium
HF0130_04F21]
Length = 364
Score = 349 bits (896), Expect = 3e-94, Method: Composition-based stats.
Identities = 127/366 (34%), Positives = 191/366 (52%), Gaps = 24/366 (6%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+++FD++LP + IA P R +RL+ V + L + DL + L +D ++F
Sbjct: 6 RLEDFDYELPDNLIAQYPAKTRSESRLLNVDLSDKKNLNFEELSFVDLASKLKKDDLLIF 65
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS-----WSVYARPSKVIKKGDILH 116
NN++VI A+LN V+ + + ++ + +PSK I G L
Sbjct: 66 NNSRVIPAKLNCVK-----STGGSVEILITNKLQTEKENIFLCNAMLKPSKKIFLGQKLK 120
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
+ + N I I I + G +PLPPYI R + +D
Sbjct: 121 IKGSSETLTIIENNLKSENNFVIEFKNPIDHI-----LKNFGIVPLPPYIKRH--PEKQD 173
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
Y DYQ +A GS+A PTAGLHF + + +L G+K FVTLHVG GTF P++V D
Sbjct: 174 YTDYQNIFATTPGSIAVPTAGLHFDNLVFKKLAEKGVKYEFVTLHVGIGTFQPIRVVDIS 233
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-------TEDGIINPW 289
H MHSE + A+A+N RI++VGTTSLR+LE+ + ++P
Sbjct: 234 RHEMHSEFCSVSNNCAKAINKATRENRRIIAVGTTSLRVLESLASIEIQEKSHIKSVSPR 293
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
S TN+F+ PG++F+ V L++NFHLPKSTLL+LVS F G E ++Y+ AI ++F+S
Sbjct: 294 SWRTNLFVKPGFKFQMVSGLITNFHLPKSTLLILVSTFLGHETCMRVYKEAIKKEFKFFS 353
Query: 350 YGDTSL 355
+GD +
Sbjct: 354 FGDAMM 359
>gi|193214235|ref|YP_001995434.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Chloroherpeton thalassium ATCC 35110]
gi|193087712|gb|ACF12987.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Chloroherpeton thalassium ATCC 35110]
Length = 339
Score = 349 bits (896), Expect = 4e-94, Method: Composition-based stats.
Identities = 128/360 (35%), Positives = 181/360 (50%), Gaps = 24/360 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +FD+ LP +IA P R + +L+ ++ + L L AFL D +V
Sbjct: 1 MNVSDFDYTLPDEQIAKYPPKERGTTKLLALNRKTG---EVQHSLYRSLDAFLEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L + + L + V IK G+ L
Sbjct: 58 LNNTKVIKARLQANKP-----TGASVELLLLEKHEGPQQIVM--YGGKIKAGNTLLVGED 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
E V + G L + + L + G +P+PPY+ RK + D + Y
Sbjct: 111 ------EVLVEEILGNG---LAKVSAAVPLLSLVEKYGNVPIPPYLNRK--AEKSDEMRY 159
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +AK QGSVAAPTA L+FT +L +L G+++ F+TLHVG GTFMP++ E H M
Sbjct: 160 QTVFAKEQGSVAAPTASLNFTESLEKKLKEKGVQLAFLTLHVGLGTFMPIRTETLSAHEM 219
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWS--GFTNIFIT 298
H E I TA A+ K+ R+V++GTT R +E A+ P G +IFI
Sbjct: 220 HREFYHISHETAAAIRLAKAEKRRVVALGTTVTRAIEHASARLLAHEPAELAGEADIFIY 279
Query: 299 P-GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
P GY F+ VD L++NFH P+ST+LML +AF G K Y+ A+ + Y F SYGD+ +F
Sbjct: 280 PGGYEFQIVDALLTNFHAPRSTVLMLAAAFAGAAHLKAAYEAALQNDYHFLSYGDSMFIF 339
>gi|187917904|ref|YP_001883467.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
hermsii DAH]
gi|119860752|gb|AAX16547.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
hermsii DAH]
Length = 348
Score = 349 bits (896), Expect = 4e-94, Method: Composition-based stats.
Identities = 124/360 (34%), Positives = 190/360 (52%), Gaps = 19/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF FDLP + IA P R +RLMV+ + + ++D+ +++SN +V
Sbjct: 4 MDTKEFYFDLPHNLIAQYPSEKRGLSRLMVLD--SGKQKIYHNDSINDIFKYIDSNTFLV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+++V +++ + + R++ ++++ +K G +
Sbjct: 62 FNDSRVRKSRIYAK-----TDHGGSVEVLILDRLTGDTFTSLISKAKKQSIGRVYTLPQG 116
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A +I K +G + ++ E G IPLPPYI KR D D Y
Sbjct: 117 -----LLAQIISK--SGNEFTLKFNKCVD-ESYFEQHGLIPLPPYI--KRNYDREDEDRY 166
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
+T Y+K GS A+ TAGLHF+ L S+L I+ F+TLHVG GTF+PV+ + ++H M
Sbjct: 167 RTIYSKYIGSSASATAGLHFSEELFSKLDEKNIEYDFITLHVGLGTFLPVRTKTIEEHKM 226
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP- 299
H E I A L K+ G +I++VGTT+LR LE+A + + TN+FI P
Sbjct: 227 HFESFSIKDSVALRLEEAKALGKKILAVGTTTLRALESAYYKQRGLIRGDQKTNLFIYPG 286
Query: 300 -GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
GY F+ +D+L +NFH P+STLLMLVS+F G + Y+ A+ Y+F+SYGD +L
Sbjct: 287 KGYEFKFIDMLFTNFHTPESTLLMLVSSFGGKDFVFTAYREAVKMNYKFFSYGDATLFLN 346
>gi|111114843|ref|YP_709461.1| S-adenosylmethionine: tRNA ribosyltransferase- isomerase [Borrelia
afzelii PKo]
gi|216264010|ref|ZP_03436004.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein QueA) [Borrelia afzelii ACA-1]
gi|123145808|sp|Q0SPE3|QUEA_BORAP RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|110890117|gb|ABH01285.1| S-adenosylmethionine: tRNA ribosyltransferase- isomerase [Borrelia
afzelii PKo]
gi|215980054|gb|EEC20876.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein QueA) [Borrelia afzelii ACA-1]
Length = 346
Score = 349 bits (895), Expect = 6e-94, Method: Composition-based stats.
Identities = 132/361 (36%), Positives = 191/361 (52%), Gaps = 20/361 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF F+LP S IA P R S+RLMV+ P L + ++ V+++ ++NS+ IV
Sbjct: 1 MKTKEFHFNLPYSLIAQYPSEKRGSSRLMVLDPKLQK--IYHENSVNNILKYINSDTFIV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV +++ N + + R+ + ++ SK G++ F
Sbjct: 59 FNNSKVRKSRMYAESEMGSN-----VEFLILDRIGTDLFTALISKSKKQIVGNVYKFPEG 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L N+ EI+L F+ E G +P+PPYI KR D D Y
Sbjct: 114 LMGKILS------KNSSEIVLKFNDDVR--EDYFEKHGFVPIPPYI--KRDYDKIDEDRY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS A+ TAGLHF+ +L S I+ F+TLHVG GTF+PV+ + ++H M
Sbjct: 164 QTIYSKYVGSAASATAGLHFSRDLFSAFEKNNIEYDFITLHVGLGTFLPVRSKKVEEHNM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFITP 299
H E I A L + K G +++S+GTT+LR LE++ TN+FI P
Sbjct: 224 HFETFLIKDCVANRLENAKFLGKKVLSIGTTTLRALESSYDNKLKKFKTGQQSTNLFIYP 283
Query: 300 G--YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
G Y F+ VD+L +NFH P+STLLMLVSAF G + Y+ I+ Y+F+SYGD L+
Sbjct: 284 GKNYCFKFVDMLFTNFHTPQSTLLMLVSAFAGKDFVFSSYEEGINKGYKFFSYGDAMLVL 343
Query: 358 Q 358
Sbjct: 344 N 344
>gi|226736734|sp|A8Z6M6|QUEA_CAMC1 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|158604995|gb|ABW74807.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter concisus 13826]
Length = 340
Score = 348 bits (893), Expect = 8e-94, Method: Composition-based stats.
Identities = 123/360 (34%), Positives = 193/360 (53%), Gaps = 31/360 (8%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +D+ LP IA PV P++ ARL+V I + DL + + + A++FN
Sbjct: 7 ISSYDYFLPEMLIAKEPVLPKEEARLLVYLKKT---KEIKHYKFKDLASLIPDDAAVIFN 63
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NTKVI A++ G + + L+ + N +SVY R + G +L+F
Sbjct: 64 NTKVIKARILGHK-----QSGGACEVMLNQPLGDNKFSVYVR--GRVSVGSVLNFADD-- 114
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQ-----ISLVGTIPLPPYIARKRPIDARDY 177
++ V++ + G ++ F+ +G+ L+ + +G +PLPPYI KR D
Sbjct: 115 ---IKVNVLELNDDGSRVVNFTKNGVILDTAQLFSELEKIGHVPLPPYI--KRADTKDDE 169
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQ+ +AK G+VAAPTA LHF+ +L R+ + + ++TLHVGAGTF V+ ++ +D
Sbjct: 170 SWYQSIFAKNSGAVAAPTASLHFSEQMLERIKAKH-DIAYITLHVGAGTFKGVECQNIND 228
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MHSE + + + S I+ VGTT R +E SGF +F+
Sbjct: 229 HKMHSEFYELSEKAQEII----SSNKPILGVGTTVTRCVEEFARS----KQSSGFCKLFL 280
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ + L++NFHLPKSTL+MLV++F G+EET ++Y+ A+S YRFYSYGD L+
Sbjct: 281 NLNNKPIRQNYLLTNFHLPKSTLIMLVTSFIGLEETMRIYETAVSEKYRFYSYGDGMLVI 340
>gi|116075044|ref|ZP_01472304.1| Queuosine biosynthesis protein [Synechococcus sp. RS9916]
gi|116067241|gb|EAU72995.1| Queuosine biosynthesis protein [Synechococcus sp. RS9916]
Length = 371
Score = 348 bits (893), Expect = 8e-94, Method: Composition-based stats.
Identities = 135/363 (37%), Positives = 190/363 (52%), Gaps = 12/363 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +D+ LP RIA PV PR +ARL++V P + + V D L + D +V
Sbjct: 7 LQLGSYDYVLPEERIAQSPVEPRHAARLLMVPPADAPLEQVRHQQVWDWQQELRAGDLLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T ++ R + + W ARP+K ++ GD +
Sbjct: 67 VNDT-----RVLRARLRVRRSGGGQAELLVLEPRGEGQWLCLARPAKKLRPGDQVWLEGL 121
Query: 121 DGQS-RLEATVIDKWNTGEILLVFS--ISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+ +S L+ +D+ G ++ S + +E + G +PLPPYIAR DA D
Sbjct: 122 EQESVALQVVAVDQATGGRVMQFPSGCDDAVAIEGLLQRYGEVPLPPYIARH---DADDQ 178
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YA G+VAAPTAGLH + LL L G+ + VTLHVG GTF PV+ ED
Sbjct: 179 TRYQTRYASKPGAVAAPTAGLHLSDALLDCLREKGVTIAHVTLHVGLGTFRPVETEDLTQ 238
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-TEDGIINPWSGFTNIF 296
+HSE + +A+ + RGGR+++VGTTS+R LE A G + P G ++
Sbjct: 239 LTLHSEWVEVTPEVVRAVEECRQRGGRVMAVGTTSVRALEGAAQAGGGQLQPLKGSVDLV 298
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGYRF V L++NFHLPKS+LL+LVSA G E +Y AI AYRFYSYGD +
Sbjct: 299 IQPGYRFAVVQGLLTNFHLPKSSLLLLVSALIGRERLLALYGVAIEEAYRFYSYGDAMWI 358
Query: 357 FQK 359
+
Sbjct: 359 APE 361
>gi|119952827|ref|YP_945036.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Borrelia turicatae 91E135]
gi|119861598|gb|AAX17366.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Borrelia turicatae 91E135]
Length = 345
Score = 348 bits (893), Expect = 9e-94, Method: Composition-based stats.
Identities = 127/360 (35%), Positives = 186/360 (51%), Gaps = 19/360 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF FDLP IA P R +RLMV+ + + ++D+ ++NSN +V
Sbjct: 1 MDTKEFYFDLPCKLIAQYPSEKRGLSRLMVLD--SGNQKIYHNDSINDIFKYINSNTFLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+++V +++ I + R++ + ++ +K G + F
Sbjct: 59 FNDSRVRKSRIYAK-----TEHGGSIEFLILDRLAGDEFTSLISKAKKQNIGKVYMFPQG 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L A +I K + I+ E G IPLPPYI KR D D Y
Sbjct: 114 -----LLAQIISKTDNEFIIKFNKCVS---ESYFEQHGLIPLPPYI--KRNYDRADEERY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
+T Y+K GS A+ TAGLHF+ L S+L I+ F+TLHVG GTF+PV+ + ++H M
Sbjct: 164 RTIYSKYIGSSASATAGLHFSEELFSKLDENNIEYDFITLHVGLGTFLPVRTKTIEEHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP- 299
H E I A L K+ G +I+++GTT+LR LE+A + TN+FI P
Sbjct: 224 HFESFSIKNSVALRLEESKALGKKILAIGTTTLRALESAYDKQKGFVRGEQKTNLFIYPG 283
Query: 300 -GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
GY F+ VD+L +NFH P+STLLMLVS+F G + Y+ A+ Y+F+SYGD +L
Sbjct: 284 KGYEFKFVDMLFTNFHTPESTLLMLVSSFGGKDFVFSAYREAVKMNYKFFSYGDATLFLN 343
>gi|159902945|ref|YP_001550289.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prochlorococcus marinus str. MIT 9211]
gi|238687195|sp|A9BE25|QUEA_PROM4 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|159888121|gb|ABX08335.1| Queuosine biosynthesis protein [Prochlorococcus marinus str. MIT
9211]
Length = 375
Score = 347 bits (891), Expect = 1e-93, Method: Composition-based stats.
Identities = 132/361 (36%), Positives = 191/361 (52%), Gaps = 12/361 (3%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +D++L IA +P+ PR ARLMVV + L +S V +L L + D +V N
Sbjct: 10 LSSYDYELDSKLIAQKPLNPRHDARLMVVSKDNGPNLCVSHLKVWNLLDELRAGDLLVIN 69
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NT+V+ A+L + L W A+P+K GD + + +
Sbjct: 70 NTRVLKARLRVR-----LKSGAMAELLLLEPHGDGRWLCLAKPAKKFLPGDYVWMEALEQ 124
Query: 123 QSRLEATVIDKWNTGEILLVFSISG---IELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+S + TG ++ F +E + G +PLPPYI R D D
Sbjct: 125 ESLKLQVLTKDLETGGRIVQFPQEFSNRKSIENLLERYGEVPLPPYI---RQHDPSDADR 181
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A GSVAAPTAGLH + +L+ LI GI+ VTLHVG GTF P++ ED +
Sbjct: 182 YQTRFASTPGSVAAPTAGLHLSDEILNALIQRGIEKASVTLHVGLGTFRPIEEEDLTNLK 241
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWSGFTNIFIT 298
+HSE + A+ + +SRGGRI +VGTT++R LE + G + + G ++ I
Sbjct: 242 LHSEWVEVGEEVVSAVQACRSRGGRIFAVGTTTVRSLEASFLLGGGSMKAFQGLVDLVIK 301
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGY+F V+ L++NFHLPKS+LL+LVSA G E ++YQ AI YRF+SYGD +
Sbjct: 302 PGYQFGVVNGLLTNFHLPKSSLLLLVSALIGRERLLELYQEAIERKYRFFSYGDAMFITP 361
Query: 359 K 359
+
Sbjct: 362 E 362
>gi|224531909|ref|ZP_03672541.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
valaisiana VS116]
gi|224511374|gb|EEF81780.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
valaisiana VS116]
Length = 346
Score = 347 bits (891), Expect = 2e-93, Method: Composition-based stats.
Identities = 131/361 (36%), Positives = 187/361 (51%), Gaps = 20/361 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF F+LP S IA P R S+RLMV+ P L + ++ V+++ ++NS+ I+
Sbjct: 1 MKTKEFHFNLPHSLIAQYPSEKRGSSRLMVLDPKLQK--IYHENSVNNILKYINSDTFII 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV +++ N + + R+ ++ SK ++ F
Sbjct: 59 FNNSKVRKSRMYAESEIGSN-----VEFLILDRIGTAMFTALISKSKKQIVDNVYKFPEG 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L N EI+L F E G +P+PPYI KR D D Y
Sbjct: 114 LIGKILS------KNGSEIVLKFDADVG--EDYFEKHGFVPIPPYI--KRDYDKIDEDRY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS AA TAGLHF +L S I+ FVTLHVG GTF+PV+ + ++H M
Sbjct: 164 QTVYSKYIGSAAAATAGLHFGKDLFSVFEKNNIEYDFVTLHVGLGTFLPVRSKRIEEHKM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFITP 299
H E I A L + K G +I+S+GTT+LR LE++ TN+FI P
Sbjct: 224 HFETFLIKDSVADRLENAKFLGKKILSIGTTTLRALESSYDHKLRKFKTGQQSTNLFIYP 283
Query: 300 G--YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y F+ VD+L +NFH P+STLLMLVS+F G + Y+ A++ +Y+F+SYGD L+
Sbjct: 284 DQNYCFKFVDMLFTNFHTPQSTLLMLVSSFAGKDFVFNSYKEAVNQSYKFFSYGDAMLVL 343
Query: 358 Q 358
Sbjct: 344 N 344
>gi|123965702|ref|YP_001010783.1| queuosine biosynthesis protein [Prochlorococcus marinus str. MIT
9515]
gi|229892796|sp|A2BV65|QUEA_PROM5 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|123200068|gb|ABM71676.1| Queuosine biosynthesis protein [Prochlorococcus marinus str. MIT
9515]
Length = 373
Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats.
Identities = 119/359 (33%), Positives = 188/359 (52%), Gaps = 10/359 (2%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D+ L S IA +P R +RLM+V + ++ DL A L D +V
Sbjct: 13 KLEAYDYCLDESLIAGKPSKVRHESRLMIVRDSSLKEDYSTNKYTKDLLAELREGDLVVI 72
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKV+ A+L + + + + ++W A+P+K +K L+ S
Sbjct: 73 NDTKVMKARLK-----VELENGQLVELLVLEKSDQSTWLCLAKPAKKLKINKQLNLKSPF 127
Query: 122 GQS-RLEATVIDKWNTGEILLVFSI--SGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
+ +L+ + ID G + I + + + + G IP+PPYI ++
Sbjct: 128 AKDIKLKISGIDDETGGRFIKFPENINDLISMNKLLDIFGEIPIPPYIKSSEE-ESFHEN 186
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YA G+VAAPTAGLH + +L+S L GI V +TLHVG GTF P+ ED D
Sbjct: 187 SYQTEYACNPGAVAAPTAGLHLSKSLISNLKKKGILVMPITLHVGYGTFKPIDQEDLSDL 246
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFI 297
+H E + + + +K R++++GTTS+R LE+ + P + + ++ I
Sbjct: 247 KLHKEWVSVSKKVVEEIKRIKKTDRRVIAIGTTSVRALESCYSYAMKDFIPIAKYVDLVI 306
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGY+F+AVD L++NFHLPKS+LL+LVSA G E +Y+ A +RF+SYGD +
Sbjct: 307 KPGYKFKAVDGLLTNFHLPKSSLLLLVSAMIGRERLLDLYKKATKEKFRFFSYGDAMYI 365
>gi|115379876|ref|ZP_01466938.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Stigmatella
aurantiaca DW4/3-1]
gi|115363113|gb|EAU62286.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Stigmatella
aurantiaca DW4/3-1]
Length = 331
Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats.
Identities = 121/330 (36%), Positives = 173/330 (52%), Gaps = 24/330 (7%)
Query: 42 SDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN---- 97
+DLP+ L D +V N+ +VI A+L G + + + +
Sbjct: 11 EHLRFADLPSLLRPGDVLVVNDARVIPARLLGAKV----GTGGRVELLVVRPAASTMTSA 66
Query: 98 ---------SWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGI 148
W + SK +K G + F LE ++ + + G
Sbjct: 67 ALSLAAEAMDWICLGQASKGLKPGAQVAFGGGLVGEVLEGLGGGEY----RVRFQAPPGG 122
Query: 149 ELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRL 208
L+ + G +PLPPYI R+ DA D YQT YA+ G+VAAPTAGLHF+ + L
Sbjct: 123 SLQALLEQAGRLPLPPYITRE--PDAADAERYQTLYARAPGAVAAPTAGLHFSEAIFEAL 180
Query: 209 ISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSV 268
+ G++ VTL VG GTF+PV+ E+ D H MH E + TA +N+ ++ G R+V+V
Sbjct: 181 DARGVRRVTVTLDVGPGTFLPVREEELDRHKMHPERYGVPEQTAAEVNAARAEGRRVVAV 240
Query: 269 GTTSLRLLETATTED-GIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAF 327
GTT +R LE AT G++ +G T +FI PGY FR VD++++NFHLP+STL+MLVSA
Sbjct: 241 GTTVVRTLEAATDPATGLLRAGTGETVLFIRPGYAFRQVDLMLTNFHLPRSTLVMLVSAL 300
Query: 328 CGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
G E T YQ A+ YRF+SYGD L+
Sbjct: 301 LGREHTLAAYQEAVREGYRFFSYGDAMLVT 330
>gi|251771668|gb|EES52243.1| Queuosine biosynthesis protein [Leptospirillum ferrodiazotrophum]
Length = 356
Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats.
Identities = 133/358 (37%), Positives = 186/358 (51%), Gaps = 16/358 (4%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVV-HPNLSCPLVISDHLVSDLPAFLNSNDAIVFNN 63
++D++LP RI L P RD +RL VV V+ LP+ L D +V N+
Sbjct: 10 DYDYELPEERIRLVPPPRRDLSRLAVVPRRGDGGRPPFLASSVAHLPSLLAPGDLLVAND 69
Query: 64 TKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQ 123
++V+ A+ R + I + + K +K L F G+
Sbjct: 70 SRVVPARTRAR-----TSRGRAIDLLVLGPFDSGTAGTVRFLGKGLKGEKRLALFG--GR 122
Query: 124 SRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
L+ D+ G E L + G +PLPPYIAR+R D D YQT
Sbjct: 123 GVLDGICYDEALE---CFSGEYRGEEALVALLEAQGEMPLPPYIARRRSADGSDRERYQT 179
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA++ GSVAAPTAGLH LL RL G++ VTLHVG GTF + +DH MH
Sbjct: 180 VYARVPGSVAAPTAGLHLGEELLDRLREKGVERASVTLHVGVGTFRGLSEGPVEDHRMHE 239
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINP--WSGFTNIFITPG 300
E + TA+A+ ++RGGR+V+VGTTSLR LE+A G I P +G+T +++ PG
Sbjct: 240 EWYVVPRETAEAIARTRARGGRVVAVGTTSLRALESAFAL-GEIPPEGRAGWTRLYVRPG 298
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIE-ETKKMYQHAISHAYRFYSYGDTSLLF 357
YRF A D L +NFH P+STLL+LV AF G + +++Y+ A+ + F SYGD L+
Sbjct: 299 YRFLAADALFTNFHTPRSTLLVLVDAFLGGDGRWREIYRRALEEGFFFLSYGDALLIL 356
>gi|332178598|gb|AEE14287.1| S-adenosylmethionine:tRNAribosyltransferase-isomerase
[Thermodesulfobium narugense DSM 14796]
Length = 335
Score = 346 bits (887), Expect = 4e-93, Method: Composition-based stats.
Identities = 128/354 (36%), Positives = 190/354 (53%), Gaps = 29/354 (8%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+ ++ LP +IA P+ PRD+A+L+VV L D +V DLP FLN D I+ NNT
Sbjct: 10 DLNYFLPNEKIAQNPIEPRDNAKLLVVDRKK---LSFEDCIVRDLPNFLNEGDLIILNNT 66
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQS 124
KVI A+L I ++ L ++ + +P K +KKG + S+
Sbjct: 67 KVIKARLYA-----ITDTSAKVEMLLIKKLDNKTGLFMTKPGKRLKKGKEIIINSKKMG- 120
Query: 125 RLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD-YVDYQTT 183
V D G ++ E+++ I G IP+PPY+ + ++D YQT
Sbjct: 121 ----IVRDIDLQGRRIIELY---DEIDKVIEEFGMIPIPPYVKKF----SKDFNEKYQTK 169
Query: 184 YAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSE 243
+A + GSVAAPTAGLHFT +LL L G+ + F+TLHVG GTF + E + ++ E
Sbjct: 170 FANVPGSVAAPTAGLHFTESLLESLREKGVLIKFITLHVGPGTFKSISNE--GEVLLEPE 227
Query: 244 IGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRF 303
I ++ K +I+ VGTT++R +E+ + P+SG+ + I PGY F
Sbjct: 228 WVDISQDVCDSIKKAKGN-NKILVVGTTTMRTVEST-----NLEPYSGYIDTVILPGYNF 281
Query: 304 RAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ D+ M+NFHLP ++LL L AF GIE KK Y++AI + YRFYS+GD L+
Sbjct: 282 KVPDMFMTNFHLPMTSLLALTMAFGGIELIKKAYKYAIENDYRFYSFGDAMLIL 335
>gi|302342503|ref|YP_003807032.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Desulfarculus baarsii DSM 2075]
gi|301639116|gb|ADK84438.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Desulfarculus baarsii DSM 2075]
Length = 365
Score = 346 bits (887), Expect = 4e-93, Method: Composition-based stats.
Identities = 126/360 (35%), Positives = 179/360 (49%), Gaps = 18/360 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+DLPP +A +P R ARLM + + V+ L L D +V N
Sbjct: 17 LADYDYDLPPELVAQKPAPRRVQARLMALGRDGGPA---RHLRVAHLCKLLRPGDILVLN 73
Query: 63 NTKVITAQLNGVRFCHINRREKEISCT-----LHMRVSPN-SWSVYARPSKVIKKGDILH 116
+TKV+ A+L + E+ L V R + ++ G L
Sbjct: 74 DTKVVPARLLVGKESGGR---AEVFLLNPALPLERLVDGRERHQALVRAHRPVRPGQRLS 130
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
DG V+++ G+ ++ + L + G PLPPYI R D
Sbjct: 131 LAGADGPWIF---VLERGQRGQAVVELPSGALGLAQ---RFGQAPLPPYIRRPNGPSDDD 184
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTD 236
YQT YA G+VAAPTAGLH + LL+ L G+ + +TLHVG GTF ED
Sbjct: 185 VRRYQTVYAAKAGAVAAPTAGLHLSHELLAALQRRGVNIARLTLHVGYGTFAEPAPEDLA 244
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
+H+E ID QA+ + ++ GGR+++VGTTS+R LE G P G+ +I
Sbjct: 245 RGRLHAEWVEIDEAACQAVATARAAGGRVIAVGTTSMRALEWLAGPGGAPRPRRGWCDIL 304
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PG+RFRA D L++NFHLP++TLLMLV+A G E Y A+ YRFYS+GD L+
Sbjct: 305 IQPGHRFRAADGLLTNFHLPRTTLLMLVAALIGRERVLAAYAEAVRQRYRFYSFGDGMLI 364
>gi|237752961|ref|ZP_04583441.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter winghamensis ATCC BAA-430]
gi|229375228|gb|EEO25319.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter winghamensis ATCC BAA-430]
Length = 361
Score = 345 bits (885), Expect = 7e-93, Method: Composition-based stats.
Identities = 121/368 (32%), Positives = 186/368 (50%), Gaps = 25/368 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +++ LP IA P+ P+++A+L+V + +I+ + FL + +VFN
Sbjct: 6 LSSYNYTLPKECIATEPITPKEAAKLLVFNRKD---CIITHSTFRNFANFLPKDTLLVFN 62
Query: 63 NTKVITAQLNGVRFCHINRR-----EKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
NTKV+ A++ G + + +I H +S N + + +K G I+ F
Sbjct: 63 NTKVLPARIYGKKILQNLKNDSNLCGAKIEALFHKEISENRY--LMQFKGRLKAGSIISF 120
Query: 118 FSQDGQSRL-EATVIDKWNTGEILLVFSISGIELERQ-----ISLVGTIPLPPYIARKRP 171
S + A + + E ++ I L R + G IPLPPYI KR
Sbjct: 121 GSVYARILGNLANIGIGFKEAEFFILKENKEIPLSRDAFFAFLEHSGHIPLPPYI--KRD 178
Query: 172 IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK 231
D DYQ+ +AK G++AAPTA LHF+ L +TLH GAGTF+ V
Sbjct: 179 DTQADKQDYQSVFAKHLGAIAAPTASLHFSKEAYKYLKE-HFSTTEITLHTGAGTFLGVN 237
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII--NPW 289
E+ +H MH+E FI +A+ + I ++GTT+ R +ET +
Sbjct: 238 TENILEHKMHTESFFIPQDSAKKMKVA----SHITAIGTTAARTIETYARSEAFKEGKAL 293
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
SG ++F+ P +A L++NFHLPK+TLLMLV++F G+E+T K+YQ AI+ YRFYS
Sbjct: 294 SGECDLFLHPQNPPKATSALLTNFHLPKTTLLMLVASFIGLEQTLKLYQEAIAKNYRFYS 353
Query: 350 YGDTSLLF 357
YGD L+
Sbjct: 354 YGDGMLIL 361
>gi|168699707|ref|ZP_02731984.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Gemmata
obscuriglobus UQM 2246]
Length = 341
Score = 344 bits (882), Expect = 2e-92, Method: Composition-based stats.
Identities = 133/353 (37%), Positives = 182/353 (51%), Gaps = 16/353 (4%)
Query: 6 FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK 65
FD+ LP IA P RD+ARL+VV + I H+ DLP L+ D +V N+T+
Sbjct: 4 FDYHLPEHLIAQHPAAERDAARLLVVRRDTQ---RIQHHIFRDLPELLSPGDLVVLNDTR 60
Query: 66 VITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSR 125
V+ A++ G R + W + A+ + G + F + G
Sbjct: 61 VLPARVVGRR----EATGGKWEGLFLRATETGLWEMLAQTRGYPEVGTV--FVTDTG--- 111
Query: 126 LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYA 185
L + + L+ G E +S G IPLPPYI + R DA D YQT YA
Sbjct: 112 LRLVLRGRTADRHWLMQPEAEGTPPE-ILSTYGHIPLPPYIRKGRE-DAGDRERYQTVYA 169
Query: 186 KIQGSVAA-PTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEI 244
A PTAGLHFT + RL + GI VTLHVG GTF PVK +D H +H E
Sbjct: 170 GAAAGSVAAPTAGLHFTPAVFDRLTARGIGTARVTLHVGLGTFAPVKEDDPTKHAIHHEW 229
Query: 245 GFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFR 304
+ T + K+RGGR+V++GTT+ R LE+A DG + + G T +FI + FR
Sbjct: 230 CAVPQGTVDTIRDTKARGGRVVAIGTTTTRTLESAARPDG-LRSFCGETGLFIHEPFEFR 288
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
AVD L++NFHLP++TLL+LV A G E + Y A++ YRF+SYGD L+
Sbjct: 289 AVDALVTNFHLPRTTLLLLVGALAGDELLARAYAEAVTCEYRFFSYGDAMLVL 341
>gi|254527222|ref|ZP_05139274.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prochlorococcus marinus str. MIT 9202]
gi|221538646|gb|EEE41099.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prochlorococcus marinus str. MIT 9202]
Length = 374
Score = 344 bits (882), Expect = 2e-92, Method: Composition-based stats.
Identities = 122/360 (33%), Positives = 191/360 (53%), Gaps = 12/360 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D+ L PS IA +P R +RLM+V ++ +++ +L D +V
Sbjct: 13 KLEAYDYFLDPSLIASKPCAIRHESRLMIVRNSVLEENCLTNKFTKNLLDEFRKGDLLVV 72
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNTKV+ A+L + NR + + R W A+P+K +K + S
Sbjct: 73 NNTKVMKARL---KVQLENRT--LVELLVLERSHECVWLCLAKPAKKLKINRKIILKSPS 127
Query: 122 GQS-RLEATVIDKWNTGEILLVFSISGIELE---RQISLVGTIPLPPYIARKRPIDARDY 177
Q L +D+ TG + F + +L ++ G IPLPPYI ++
Sbjct: 128 AQDINLMVDGVDE-ETGGRFIKFPENITDLNSMNDLLNKYGEIPLPPYIKNSEE-ESFHE 185
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YA G+VAAPTAGLH + +L+S L G+ + +TLHVG GTF P+ ED D
Sbjct: 186 NSYQTEYATNPGAVAAPTAGLHLSKSLISNLKKKGVIILPITLHVGYGTFKPIDQEDLSD 245
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIF 296
+H E ++ + + +K RI+++GTTS+R LE+ +++ P + + ++
Sbjct: 246 LKLHKEWVSVNEEVVEEIKKIKKTDRRIIAIGTTSVRALESCYSKEINDFIPIAKYVDLV 305
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+F+ VD L++NFHLPKS+LL+LVSA G E +Y+ AI +RF+SYGD +
Sbjct: 306 IKPGYKFKVVDGLLTNFHLPKSSLLLLVSAMIGRERLLDLYKKAIKEKFRFFSYGDAMYI 365
>gi|217033322|ref|ZP_03438753.1| hypothetical protein HP9810_9g75 [Helicobacter pylori 98-10]
gi|216944263|gb|EEC23688.1| hypothetical protein HP9810_9g75 [Helicobacter pylori 98-10]
Length = 345
Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats.
Identities = 123/365 (33%), Positives = 192/365 (52%), Gaps = 28/365 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D+DLP IA P+ P++ A+L+V I+ + F N
Sbjct: 1 MKEFDLESYDYDLPKELIANYPILPKEKAKLLVYERRSQK---ITHTTFKHVLDFFPKNA 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
IV N+TKVI A+L G + + + H N+ + IK GD + F
Sbjct: 58 LIVLNDTKVIKARLFGSKHAFLPSKTT--EVFFHRFFKDNT--ALTQIKGKIKVGDKIFF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILL-----VFSISGIELERQISLVGTIPLPPYIARKRPI 172
+ A V++ + G+ L+ ++ + + + G +PLPPYI KR
Sbjct: 114 -----DAHYYAEVLELLHNGQRLIAFYNNKTPLNQANILKLLEQYGHMPLPPYI--KRAD 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D +YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+
Sbjct: 167 ESLDAHEYQSVFAKHMGAVAAPTASLHFSQNTLEKLL-KDFKHAFLTLHVGAGTFLGVET 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H +H+E+ I + + L + ++ +GTT+LR +E + N +
Sbjct: 226 KDIREHQIHTEVLRIPKKSQEIL----QKSQEVLCIGTTALRSVEYFKRLENP-NQEAFE 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ V+ L++NFHLPKS+LLMLVSA G+E+TK++YQ AI YRFYSYGD
Sbjct: 281 CDIFLHLANPILHVNHLLTNFHLPKSSLLMLVSAMVGLEKTKEIYQIAIEKKYRFYSYGD 340
Query: 353 TSLLF 357
L+
Sbjct: 341 GMLIL 345
>gi|308182554|ref|YP_003926681.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori PeCan4]
gi|308064739|gb|ADO06631.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori PeCan4]
Length = 345
Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats.
Identities = 122/365 (33%), Positives = 192/365 (52%), Gaps = 28/365 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D+DLP IA P+ P++ A+L+V I+ + F N
Sbjct: 1 MKEFDLESYDYDLPKELIANYPILPKEKAKLLVYERRSQK---ITHTTFEHVLDFFPKNA 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+V N+TKVI A+L G + + + H N+ + IK GD + F
Sbjct: 58 LVVLNDTKVIKARLFGSKHAFLPSKTT--EVFFHRFFKDNT--ALTQIKGKIKVGDKIFF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILL-----VFSISGIELERQISLVGTIPLPPYIARKRPI 172
+ A V++ + G+ L+ ++ + + + G +PLPPYI KR
Sbjct: 114 -----DAHYHAEVLELLHNGQRLIAFYGNKTPLNQENILKLLEQYGHMPLPPYI--KRAD 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D +YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+
Sbjct: 167 ESLDTHEYQSVFAKHIGAVAAPTASLHFSQNTLEKLL-KDFKHAFLTLHVGAGTFLSVET 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H +H+E+ I + + L I+ +GTT+LR +E + N +
Sbjct: 226 KDIREHQIHTEVLRIPKKSQEIL----QESQEILCIGTTALRSVEYFKRLENP-NQEAFE 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ + V+ L++NFHLPKS+LLMLVSA G+E+TK++Y+ AI YRFYSYGD
Sbjct: 281 CDIFLHLANPIQHVNYLLTNFHLPKSSLLMLVSAMIGLEKTKEIYKIAIEKKYRFYSYGD 340
Query: 353 TSLLF 357
L+
Sbjct: 341 GMLIL 345
>gi|24217263|ref|NP_714746.1| queuosine biosynthesis protein [Leptospira interrogans serovar Lai
str. 56601]
gi|24202323|gb|AAN51761.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Leptospira
interrogans serovar Lai str. 56601]
Length = 352
Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats.
Identities = 130/356 (36%), Positives = 186/356 (52%), Gaps = 16/356 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+KEF+F L RIA PV RD +RLMV+ N S+ ++ ++L D +V N
Sbjct: 6 LKEFEFILSEERIARYPVANRDESRLMVLDVNTGTIS--SEPSFKNVISYLKEGDLLVAN 63
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKV ++ ++ + I + + + W R SK +K G+ L D
Sbjct: 64 HTKVSKRRVY-----LRSKTKARIHEAMFLEEKESLWKCKIRNSKKLKMGEQLC----DE 114
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+++ I++ + L S E +G IP+PPY+ KR D+ D + YQT
Sbjct: 115 KTKQILFTIERKEEEFVFLKPKHSLQ--EEDFQQIGEIPIPPYL--KRNADSEDEIRYQT 170
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
+AK GSVAAPTAGLHF+ N+ L I+ + L VG GTF P+ E+ + +H
Sbjct: 171 LFAKTPGSVAAPTAGLHFSENIFKTLKEKKIQFCTLELKVGYGTFQPLTEENFQNQKLHK 230
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E F++ +AQ LN K RI S+GTT+LR LE+A G T +FI P
Sbjct: 231 EEFFLEESSAQMLNLAKKERRRIFSIGTTTLRALESAYDPVTNTFCSGPGVTELFILPEN 290
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
R ++ L++NFHLP S+LL+LVSAF G E K YQ AI +RFYSYGD L+
Sbjct: 291 RLQSCQGLITNFHLPGSSLLLLVSAFAGKELILKAYQKAIQEKFRFYSYGDAMLIL 346
>gi|308061736|gb|ADO03624.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori Cuz20]
Length = 345
Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats.
Identities = 123/365 (33%), Positives = 192/365 (52%), Gaps = 28/365 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D+DLP IA P+ P++ A+L+V I+ + F N
Sbjct: 1 MKEFDLESYDYDLPKELIANYPILPKEKAKLLVYERRSQK---ITHTTFEHVLDFFPKNA 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+V N+TKVI A+L G + + + H N+ + IK GD + F
Sbjct: 58 LVVLNDTKVIKARLFGSKHAFLPSKTT--EVFFHRFFKDNT--ALTQIKGKIKVGDKIFF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILL-----VFSISGIELERQISLVGTIPLPPYIARKRPI 172
+ A V++ + G+ L+ ++ + + + G +PLPPYI KR
Sbjct: 114 -----DANYHAEVLELLHNGQRLIAFYGNKTPLNQANILKLLEQYGHMPLPPYI--KRAD 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D +YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+
Sbjct: 167 ESLDTHEYQSVFAKHMGAVAAPTASLHFSQNTLEKLL-KDFKHAFLTLHVGAGTFLGVET 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H +H+E+ I + + L + I+ +GTT+LR +E + N +
Sbjct: 226 KDIREHQIHTEVLRIPKKSQEILQKTQE----ILCIGTTALRSVEYFKRLENP-NQEAFE 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ V+ L++NFHLPKS+LLMLVSA G+E+TK++YQ AI YRFYSYGD
Sbjct: 281 CDIFLHLANPILHVNYLLTNFHLPKSSLLMLVSAMIGLEKTKEIYQIAIEKKYRFYSYGD 340
Query: 353 TSLLF 357
L+
Sbjct: 341 GMLIL 345
>gi|198276273|ref|ZP_03208804.1| hypothetical protein BACPLE_02465 [Bacteroides plebeius DSM 17135]
gi|198270715|gb|EDY94985.1| hypothetical protein BACPLE_02465 [Bacteroides plebeius DSM 17135]
Length = 422
Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats.
Identities = 128/422 (30%), Positives = 192/422 (45%), Gaps = 89/422 (21%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ ++++ LP RIA P+ RD ++L+V IS+ + LP +L ++F
Sbjct: 25 KISDYNYPLPDERIAKFPLPVRDQSKLLVYQHG-----QISETHFTSLPDYLEPGTLMIF 79
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------------WSVYARPSKVI 109
NNTKVI A+L+ + I + PN W K
Sbjct: 80 NNTKVIQARLHFRKE-----TGALIEIFCLEPIKPNDYVLNFQQTQHAAWLCMIGNLKKW 134
Query: 110 KKG----------DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGT 159
K+G L + G+ + ID + + + G
Sbjct: 135 KEGPLHKEMTVKGKTLTLTATRGECHGTSHWID--------FTWDNPEVTFADILEFFGE 186
Query: 160 IPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVT 219
+P+PPY+ R+ D YQT Y+KI+GSVAAPTAGLHFT +L+ L G+ + VT
Sbjct: 187 LPIPPYLNRE--TQESDKETYQTVYSKIKGSVAAPTAGLHFTERVLNALKEKGVDLEEVT 244
Query: 220 LHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET- 278
LHVGAGTF PVK E+ + H MH+E ++ T + + + GG V+VGTTS+R LE+
Sbjct: 245 LHVGAGTFKPVKSEEIEGHEMHTEYISVNRGT---IEKLLAHGGEAVAVGTTSVRTLESL 301
Query: 279 ------------ATTEDGIINPWSGF------------------------------TNIF 296
A+ ++ + W + T I
Sbjct: 302 YYIGVTLSQHPDASQQELHVQQWQPYETHPELSTTEALQQILDYMNRNQLDALHTSTQII 361
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY + V +++NFH P+STLL+LVSAF + +Y +A++H +RF SYGD+SLL
Sbjct: 362 IAPGYNYHIVKKMVTNFHQPQSTLLLLVSAFV-KGNWRPIYDYALAHDFRFLSYGDSSLL 420
Query: 357 FQ 358
Sbjct: 421 IP 422
>gi|148238920|ref|YP_001224307.1| S-adenosylmethionine:tRNA-ribosyltransferase-isom erase
[Synechococcus sp. WH 7803]
gi|166218751|sp|A5GJ95|QUEA_SYNPW RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|147847459|emb|CAK23010.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
[Synechococcus sp. WH 7803]
Length = 370
Score = 343 bits (880), Expect = 3e-92, Method: Composition-based stats.
Identities = 133/362 (36%), Positives = 196/362 (54%), Gaps = 12/362 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +D++LP +RIA RPV PR +A+L++V P + L V D L S D +V
Sbjct: 7 LQLSAYDYELPEARIAQRPVEPRHAAKLLMVPPLEASSLQGRHGTVWDWQNELRSGDLLV 66
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L R W ARP K ++ GD + +
Sbjct: 67 VNDTRVLQARLRVRRSGGGLGELLV-----LEPRGEGRWLCLARPGKKLRPGDQVWLEAL 121
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIE---LERQISLVGTIPLPPYIARKRPIDARDY 177
+ + +G ++ F + ++ +E + G +PLPPYI D D
Sbjct: 122 EQDPLPLQVLASDPASGGRIVQFPPAFVDAMAIEALLQRYGEVPLPPYITCH---DDSDQ 178
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YA G+VAAPTAGLH + +LL + + G+++ VTLHVG GTF PV+ ED +
Sbjct: 179 ERYQTRYASRPGAVAAPTAGLHLSDDLLQAIRARGVQMSSVTLHVGLGTFRPVETEDLSE 238
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-INPWSGFTNIF 296
+HSE + +A+ + + RGGR+++VGTTS+R LE A G + P G ++
Sbjct: 239 LSLHSEWVEVSTQLVEAVQACRQRGGRVIAVGTTSVRALEGAAAAGGGDLQPLKGPVDLV 298
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+FR VD L++NFHLPKS+LL+LVSA G E +Y AI++ YRFYSYGD +
Sbjct: 299 IQPGYQFRVVDGLLTNFHLPKSSLLLLVSALIGRERLLDLYALAIANDYRFYSYGDAMWI 358
Query: 357 FQ 358
Sbjct: 359 AP 360
>gi|15611431|ref|NP_223082.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori J99]
gi|7674181|sp|Q9ZM60|QUEA_HELPJ RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|4154891|gb|AAD05941.1| S-ADENOSYLMETHIONINE TRNA RIBOSYLTRANSFERASE-ISOMERASE
[Helicobacter pylori J99]
Length = 345
Score = 342 bits (879), Expect = 3e-92, Method: Composition-based stats.
Identities = 123/365 (33%), Positives = 191/365 (52%), Gaps = 28/365 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D+ LP IA PV P++ A+L+V I+ + F N
Sbjct: 1 MKEFDLESYDYHLPKELIANYPVLPKEKAKLLVYERRSQT---ITHTTFEHVLDFFPKNA 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+V N+TKVI A+L G + + + H N+ + IK GD + F
Sbjct: 58 LVVLNDTKVIKARLFGSKHAFLPSKTT--EVFFHRFFKGNT--ALTQIKGKIKVGDKIFF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVF-----SISGIELERQISLVGTIPLPPYIARKRPI 172
+ A V++ + G+ L+ F ++ + + + G +PLPPYI KR
Sbjct: 114 -----DANYYAEVLELLHNGQRLIAFYDNQTPLNQENILKLLEQYGHMPLPPYI--KRAD 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D +YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+
Sbjct: 167 ESLDAHEYQSVFAKHIGAVAAPTASLHFSQNALEKLL-KDFKHAFLTLHVGAGTFLSVET 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H +H+E+ I + + L ++ +GTT+LR +E N S
Sbjct: 226 KDIREHQIHTEVLHIPKKSQEIL----QESQEVLCIGTTALRSVEYFKRLKNP-NQESFE 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ + V+ L++NFHLPKS+LLMLVSA G+E+TK++Y+ AI YRFYSYGD
Sbjct: 281 CDIFLHLANPIQHVNHLLTNFHLPKSSLLMLVSAMIGLEKTKEIYKIAIEKKYRFYSYGD 340
Query: 353 TSLLF 357
L+
Sbjct: 341 GMLIL 345
>gi|317013828|gb|ADU81264.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori Gambia94/24]
Length = 345
Score = 342 bits (879), Expect = 3e-92, Method: Composition-based stats.
Identities = 124/365 (33%), Positives = 190/365 (52%), Gaps = 28/365 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D+ LP IA PV P++ A+L+V I+ + F N
Sbjct: 1 MKEFDLESYDYHLPKELIANYPVLPKEKAKLLVYERRSQK---ITHTTFEHVLDFFPKNA 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+V N+TKVI A+L G + + + H N+ + IK GD + F
Sbjct: 58 LVVLNDTKVIKARLFGSKHAFLPSKTT--EVFFHRFFKGNT--ALIQIKGKIKAGDKIFF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVF-----SISGIELERQISLVGTIPLPPYIARKRPI 172
A V++ + G+ L+ F ++ + + + G +PLPPYI KR
Sbjct: 114 -----DENYYAEVLELLHNGQRLIAFYDNQTPLNQENILKLLEQYGHMPLPPYI--KRAD 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D +YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+
Sbjct: 167 ESLDAHEYQSVFAKHIGAVAAPTASLHFSQNTLEKLL-KDFKHAFLTLHVGAGTFLGVET 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H +H+E+ I + + L I+ +GTT+LR +E N S
Sbjct: 226 KDIREHQIHTEVLHIPKKSQEIL----QESQEILCIGTTALRSVEYFKRLKNP-NQESFE 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ + V+ L++NFHLPKS+LLMLVSA G+E+TK++Y+ AI YRFYSYGD
Sbjct: 281 CDIFLHLANPIQHVNHLLTNFHLPKSSLLMLVSAMIGLEKTKEIYKIAIEKKYRFYSYGD 340
Query: 353 TSLLF 357
L+
Sbjct: 341 GMLIL 345
>gi|317180719|dbj|BAJ58505.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori F32]
Length = 345
Score = 342 bits (877), Expect = 5e-92, Method: Composition-based stats.
Identities = 124/365 (33%), Positives = 192/365 (52%), Gaps = 28/365 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D+DLP IA P+ P++ A+L+V I+ + F N
Sbjct: 1 MKEFDLESYDYDLPKELIANYPILPKEKAKLLVYERRSQK---ITHTTFEHVLDFFPKNA 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+V N+TKVI A+L G + + + H N+ + IK GD + F
Sbjct: 58 LVVLNDTKVIKARLFGSKHAFLPSKTT--EVFFHRFFKDNT--ALTQIKGKIKVGDKIFF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILL-----VFSISGIELERQISLVGTIPLPPYIARKRPI 172
+ A V++ + G+ L+ ++ + + + G +PLPPYI KR
Sbjct: 114 -----DAHYYAEVLELLHNGQRLIAFYGNKTPLNQANILKLLEQYGHMPLPPYI--KRAD 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D +YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+
Sbjct: 167 ESLDAHEYQSVFAKHMGAVAAPTASLHFSQNTLEKLL-KDFKHAFLTLHVGAGTFLGVET 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H +H+E+ I + + L + I+ VGTT+LR +E + N +
Sbjct: 226 KDIREHQIHTEVLRIPKKSQEIL----QKSQEILCVGTTALRSVEYFKRLENP-NQEAFE 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ V+ L++NFHLPKS+LLMLVSA G+E+TK++YQ AI YRFYSYGD
Sbjct: 281 CDIFLHLANPILHVNHLLTNFHLPKSSLLMLVSAMVGLEKTKEIYQIAIEKKYRFYSYGD 340
Query: 353 TSLLF 357
L+
Sbjct: 341 GMLIL 345
>gi|315586376|gb|ADU40757.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori 35A]
Length = 345
Score = 342 bits (877), Expect = 6e-92, Method: Composition-based stats.
Identities = 124/365 (33%), Positives = 192/365 (52%), Gaps = 28/365 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D+DLP IA P+ P++ A+L+V I+ + F N
Sbjct: 1 MKEFDLESYDYDLPKELIANYPILPKEKAKLLVYERRSQK---ITHTTFEHVLDFFPKNA 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+V N+TKVI A+L G + + + H N+ + IK GD + F
Sbjct: 58 LVVLNDTKVIKARLFGSKHAFLPSKTT--EVFFHRFFKNNT--ALTQIKGKIKVGDKIFF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILL-----VFSISGIELERQISLVGTIPLPPYIARKRPI 172
+ A V++ + G+ L+ ++ + + + G +PLPPYI KR
Sbjct: 114 -----DANYYAEVLELLHNGQRLIAFYNNKTPLNQASILKLLEQYGHMPLPPYI--KRAD 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D +YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+
Sbjct: 167 ESLDAHEYQSVFAKHMGAVAAPTASLHFSQNTLEKLL-KDFKHAFLTLHVGAGTFLGVET 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H +H+E+ I + + L + I+ VGTT+LR +E + N +
Sbjct: 226 KDIREHQIHTEVLRIPKKSQEIL----QKSQEILCVGTTALRSVEYFKRLENP-NQEAFE 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ V+ L++NFHLPKS+LLMLVSA G+E+TK++YQ AI YRFYSYGD
Sbjct: 281 CDIFLHLANPILHVNYLLTNFHLPKSSLLMLVSAMVGLEKTKEIYQIAIEKKYRFYSYGD 340
Query: 353 TSLLF 357
L+
Sbjct: 341 GMLIL 345
>gi|261837818|gb|ACX97584.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori 51]
Length = 345
Score = 342 bits (877), Expect = 6e-92, Method: Composition-based stats.
Identities = 124/365 (33%), Positives = 191/365 (52%), Gaps = 28/365 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D+DLP IA P+ P++ A+L+V I+ + F N
Sbjct: 1 MKEFDLESYDYDLPKELIANYPILPKEKAKLLVYERRSQK---ITHTTFEQVLDFFPKNA 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+V N+TKVI A+L G + + + H N+ + IK GD + F
Sbjct: 58 LVVLNDTKVIKARLFGSKHAFLPSKTT--EVFFHRFFKDNT--ALTQIKGKIKVGDKIFF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILL-----VFSISGIELERQISLVGTIPLPPYIARKRPI 172
+ A V++ + G+ L+ ++ + + + G +PLPPYI KR
Sbjct: 114 -----DANYHAEVLELLHNGQRLIAFYDNKTPLNQANILKLLEQHGHMPLPPYI--KRAD 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D +YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+
Sbjct: 167 ESLDTHEYQSVFAKHMGAVAAPTASLHFSQNTLEKLL-KDFKHAFLTLHVGAGTFLGVET 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H +H+EI I + + L + I+ +GTT+LR +E N +
Sbjct: 226 KDIREHQIHTEILRIPKKSQEIL----QKSQEILCIGTTALRSVEYFKRLKNP-NQEAFE 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ V+ L++NFHLPKS+LLMLVSA G+E+TK++YQ AI YRFYSYGD
Sbjct: 281 CDIFLHLANPILHVNYLLTNFHLPKSSLLMLVSAMIGLEKTKEIYQIAIEKKYRFYSYGD 340
Query: 353 TSLLF 357
L+
Sbjct: 341 GMLIL 345
>gi|308063247|gb|ADO05134.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori Sat464]
Length = 345
Score = 341 bits (876), Expect = 7e-92, Method: Composition-based stats.
Identities = 123/365 (33%), Positives = 192/365 (52%), Gaps = 28/365 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D+DLP IA P+ P++ A+L+V I+ + F N
Sbjct: 1 MKEFDLESYDYDLPKELIANYPILPKEKAKLLVYERRSQK---ITHTTFEHVLDFFPKNA 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+V N+TKVI A+L G + + + H N+ + IK GD + F
Sbjct: 58 LVVLNDTKVIKARLFGSKHAFLPSKTT--EVFFHRFFKDNT--ALTQIKGKIKVGDKIFF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILL-----VFSISGIELERQISLVGTIPLPPYIARKRPI 172
+ A V++ + G+ L+ ++ + + + G +PLPPYI KR
Sbjct: 114 -----DAHYHAEVLELLHNGQRLIAFYGNKTPLNQANILKLLEQYGHMPLPPYI--KRAD 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D +YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+
Sbjct: 167 ESLDAHEYQSVFAKHMGAVAAPTASLHFSQNTLEKLL-KDFKHAFLTLHVGAGTFLGVET 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H +H+E+ I + + L + I+ +GTT+LR +E + N +
Sbjct: 226 KDIREHQIHTEVLRIPKKSQEIL----QKSQEILCIGTTALRSVEYFKRLENP-NQEAFE 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ V+ L++NFHLPKS+LLMLVSA G+E+TK++YQ AI YRFYSYGD
Sbjct: 281 CDIFLHLANPILHVNYLLTNFHLPKSSLLMLVSAMVGLEKTKEIYQIAIEKKYRFYSYGD 340
Query: 353 TSLLF 357
L+
Sbjct: 341 GMLIL 345
>gi|297379606|gb|ADI34493.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori v225d]
Length = 345
Score = 341 bits (876), Expect = 7e-92, Method: Composition-based stats.
Identities = 122/365 (33%), Positives = 191/365 (52%), Gaps = 28/365 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D+DLP IA P+ P++ A+L+V I+ + F N
Sbjct: 1 MKEFDLESYDYDLPKKLIANYPILPKEKAKLLVYERRSQK---ITHTTFEHVLDFFPKNA 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+V N+TKVI A+L G + + + H N+ + IK GD + F
Sbjct: 58 LVVLNDTKVIKARLFGSKHAFLPSKTT--EVFFHRFFKDNT--ALTQIKGKIKVGDKIFF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILL-----VFSISGIELERQISLVGTIPLPPYIARKRPI 172
+ A V++ + G+ L+ ++ + + + G +PLPPYI KR
Sbjct: 114 -----DAHYHAEVLELLHNGQRLIAFYGNKNPLNQANILKLLEQYGHMPLPPYI--KRAD 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D +YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+
Sbjct: 167 ESLDTHEYQSVFAKHMGAVAAPTASLHFSQNTLEKLL-KDFKHAFLTLHVGAGTFLGVET 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H +H+E+ I + + L + I+ +GTT+LR +E + N +
Sbjct: 226 KDIREHQIHTEVLRIPKKSQEIL----QKSQEILCIGTTALRSVEYFKRLENP-NQEAFE 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ V+ L++NFHLPKS+LLMLVSA G+E+ K++YQ AI YRFYSYGD
Sbjct: 281 CDIFLHLANPILHVNYLLTNFHLPKSSLLMLVSAMVGLEKIKEIYQIAIEKKYRFYSYGD 340
Query: 353 TSLLF 357
L+
Sbjct: 341 GMLIL 345
>gi|45655741|ref|YP_003550.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
gi|45602712|gb|AAS72187.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
Length = 352
Score = 341 bits (876), Expect = 8e-92, Method: Composition-based stats.
Identities = 130/356 (36%), Positives = 186/356 (52%), Gaps = 16/356 (4%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+KEF+F L RIA PV RD +RLMV+ N S+ ++ ++L D +V N
Sbjct: 6 LKEFEFILSEERIARYPVANRDESRLMVLDVNTGTIS--SEPSFKNVISYLKEGDLLVAN 63
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKV ++ ++ + I + + + W R SK +K G+ L D
Sbjct: 64 HTKVSKRRVY-----LRSKTKARIHEAMFLEEKESLWKCKIRNSKKLKMGEQLC----DE 114
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+++ I++ + L S E +G IP+PPY+ KR D+ D + YQT
Sbjct: 115 KTKQILFTIERKEEEFVFLKPKHSLQ--EEDFQQIGEIPIPPYL--KRNADSEDEIRYQT 170
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
+AK GSVAAPTAGLHF+ N+ L I+ + L VG GTF P+ E+ + +H
Sbjct: 171 LFAKTPGSVAAPTAGLHFSENIFKTLKEKKIQFCTLELKVGYGTFQPLTEENFQNQKLHR 230
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGY 301
E F++ +AQ LN K RI S+GTT+LR LE+A G T +FI P
Sbjct: 231 EDFFLEESSAQMLNLAKKERRRIFSIGTTTLRALESAYDPVTNTFCSGPGVTELFILPEN 290
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
R ++ L++NFHLP S+LL+LVSAF G E K YQ AI +RFYSYGD L+
Sbjct: 291 RLQSCQGLITNFHLPGSSLLLLVSAFAGKELILKAYQKAIQEKFRFYSYGDAMLIL 346
>gi|224026756|ref|ZP_03645122.1| hypothetical protein BACCOPRO_03513 [Bacteroides coprophilus DSM
18228]
gi|224019992|gb|EEF77990.1| hypothetical protein BACCOPRO_03513 [Bacteroides coprophilus DSM
18228]
Length = 405
Score = 341 bits (875), Expect = 1e-91, Method: Composition-based stats.
Identities = 127/422 (30%), Positives = 195/422 (46%), Gaps = 89/422 (21%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ ++++ LP RIA P+ RD ++L+V +S+ + LP +L + + ++F
Sbjct: 8 KISDYNYPLPDERIAKFPLPVRDQSKLLVYRHG-----EVSETRFTSLPDYLEAGELMIF 62
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------------WSVYARPSKVI 109
NNTKVI A+L+ + I + PN W K
Sbjct: 63 NNTKVIQARLHFRKE-----TGALIEIFCLEPIQPNDYVLNFQQTSHAAWLCMIGNLKKW 117
Query: 110 KKGD----------ILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGT 159
K+G + + G+ R + +D + I + + G
Sbjct: 118 KEGSLHKEMNVKGHTITLTATRGECRGTSHWVD--------FTWDNPEITFADILEVFGE 169
Query: 160 IPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVT 219
+P+PPY+ R+ D YQT Y+KI+GSVAAPTAGLHFT +L L G+ + VT
Sbjct: 170 LPIPPYLNRE--TQESDKETYQTVYSKIKGSVAAPTAGLHFTERVLQALRDKGVDLEEVT 227
Query: 220 LHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET- 278
LHVGAGTF PVK E+ + H MH+E ++ T + + + GG+ ++VGTTS+R LE+
Sbjct: 228 LHVGAGTFKPVKSEEIEGHEMHTEYISVNRQT---IEKLIAHGGKAIAVGTTSVRTLESL 284
Query: 279 ------------ATTEDGIINPWSGF------------------------------TNIF 296
A E+ + W + T I
Sbjct: 285 YYIGVTIASHPDAGQEELHVRQWQPYETHPTMTTVESLQQILDYMKRHELEALHTSTQII 344
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY + V +++NFH P+STLL+LVSAF + +Y +A++H +RF SYGD+SLL
Sbjct: 345 IAPGYTYHIVQKMVTNFHQPQSTLLLLVSAFV-KGNWRTIYDYALAHDFRFLSYGDSSLL 403
Query: 357 FQ 358
Sbjct: 404 IP 405
>gi|217031611|ref|ZP_03437116.1| hypothetical protein HPB128_21g169 [Helicobacter pylori B128]
gi|298736674|ref|YP_003729202.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori B8]
gi|216946811|gb|EEC25407.1| hypothetical protein HPB128_21g169 [Helicobacter pylori B128]
gi|298355866|emb|CBI66738.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori B8]
Length = 345
Score = 341 bits (875), Expect = 1e-91, Method: Composition-based stats.
Identities = 122/365 (33%), Positives = 192/365 (52%), Gaps = 28/365 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D+DLP IA P+ P++ A+L+V I+ + F N
Sbjct: 1 MKEFDLESYDYDLPKELIANYPILPKEKAKLLVYERRSQK---ITHTTFEHVLDFFPKNA 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+V N+TKVI A+L G + + + H N+ + IK GD + F
Sbjct: 58 LVVLNDTKVIKARLFGSKHAFLPSKTT--EVFFHRFFKNNT--ALTQIKGKIKVGDKIFF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVF-----SISGIELERQISLVGTIPLPPYIARKRPI 172
+ A V++ + G+ L+ F ++ + + + G +PLPPYI KR
Sbjct: 114 -----DANYYAEVLELLHNGQRLIAFYDNQTPLNQENILKLLEQYGHMPLPPYI--KRAD 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D +YQ+ +AK G+VAAPTA LHF+ + L +L+ K F+TLHVGAGTF+ V+
Sbjct: 167 ESLDAHEYQSVFAKHIGAVAAPTASLHFSQHCLEKLL-KDFKHAFLTLHVGAGTFLGVET 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H +H+E+ I + + L + I+ +GTT+LR +E N S
Sbjct: 226 KDIREHQIHTEVLHIPKKSQEILRESQE----ILCIGTTALRSVEYFKRLKNP-NQESFE 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ V+ L++NFHLPKS+LLMLVSA G+++TK++Y+ AI YRFYSYGD
Sbjct: 281 CDIFLHLANPILHVNYLLTNFHLPKSSLLMLVSAMIGLDKTKEIYKIAIEKKYRFYSYGD 340
Query: 353 TSLLF 357
L+
Sbjct: 341 GMLIL 345
>gi|118475238|ref|YP_892279.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter fetus subsp. fetus 82-40]
gi|261885962|ref|ZP_06010001.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter fetus subsp. venerealis str. Azul-94]
gi|226736735|sp|A0RPZ6|QUEA_CAMFF RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|118414464|gb|ABK82884.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter fetus subsp. fetus 82-40]
Length = 339
Score = 341 bits (875), Expect = 1e-91, Method: Composition-based stats.
Identities = 120/360 (33%), Positives = 186/360 (51%), Gaps = 32/360 (8%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +D+ LP IA P P++ ARL+V + +L L AI+FN
Sbjct: 7 LSSYDYKLPQDLIATAPTMPKEEARLLVYDRQKDS---VFHLKFKNLSEILPE-CAIIFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKVI A++ G + EI L+ + + +S Y R +K G L F
Sbjct: 63 DTKVIKARIYGRKDS-----GAEIQMLLNQPLQNSLFSCYIR--GKVKVGTKLKF----- 110
Query: 123 QSRLEATVIDKWNTGEILLVFS-----ISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
+EA V++ + ++ F ++ E+ +S +G +PLPPYI R+ D D
Sbjct: 111 DLGVEAEVLELKDDSSRIVKFKKNEQILNTSEIYNILSHIGHVPLPPYIKREDTPD--DE 168
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
+ YQ+ +AK +G+VAAPTA LHF +L L + + ++TLHVGAGTF V+ D +
Sbjct: 169 IWYQSIFAKNEGAVAAPTASLHFNDQMLDDL-NKTHDISYITLHVGAGTFKGVEHCDIRE 227
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MHSE I + +++ VGTT R +E GF ++F+
Sbjct: 228 HKMHSEFYCISKKAKNII----DSDIKLLGVGTTVTRCIEYYYRT----KQPKGFCDLFL 279
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
P + D L++NFHLPKSTL+MLV++F G+E+T ++Y+ A+ + Y+FYSYGD L+
Sbjct: 280 HPDNKPLRQDFLLTNFHLPKSTLIMLVASFIGLEKTMEIYKQAVENRYKFYSYGDGMLII 339
>gi|188527195|ref|YP_001909882.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori Shi470]
gi|238691904|sp|B2USM0|QUEA_HELPS RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|188143435|gb|ACD47852.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori Shi470]
Length = 345
Score = 341 bits (874), Expect = 1e-91, Method: Composition-based stats.
Identities = 122/365 (33%), Positives = 192/365 (52%), Gaps = 28/365 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D+DLP IA P+ P++ A+L+V I+ + F N
Sbjct: 1 MKEFDLESYDYDLPKELIANYPILPKEKAKLLVYERRSQK---ITHTTFEHVLDFFPKNA 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+V N+TKVI A++ G + + + H N+ + IK GD + F
Sbjct: 58 LVVLNDTKVIKARIFGSKHAFLPSKTT--EVFFHRFFKDNT--ALTQIKGKIKVGDKIFF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILL-----VFSISGIELERQISLVGTIPLPPYIARKRPI 172
+ A V++ + G+ L+ ++ + + + G +PLPPYI KR
Sbjct: 114 -----DAHYHAEVLELLHNGQRLIAFYGNKTPLNQANILKLLEQYGHMPLPPYI--KRAD 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D +YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+
Sbjct: 167 ESLDAHEYQSVFAKHMGAVAAPTASLHFSQNTLEKLL-KDFKHAFLTLHVGAGTFLGVET 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H +H+E+ I + + L + I+ +GTT+LR +E + N +
Sbjct: 226 KDIREHQIHTEVLRIPKKSQEIL----QKSQEILCIGTTALRSVEYFKRLENP-NQEAFE 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ V+ L++NFHLPKS+LLMLVSA G+E+TK++YQ AI YRFYSYGD
Sbjct: 281 CDIFLHLANPILHVNYLLTNFHLPKSSLLMLVSAMVGLEKTKEIYQIAIEKKYRFYSYGD 340
Query: 353 TSLLF 357
L+
Sbjct: 341 GMLIL 345
>gi|294673506|ref|YP_003574122.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella ruminicola 23]
gi|294472055|gb|ADE81444.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella ruminicola 23]
Length = 405
Score = 341 bits (874), Expect = 1e-91, Method: Composition-based stats.
Identities = 130/413 (31%), Positives = 194/413 (46%), Gaps = 72/413 (17%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ ++++ LP RIA P+ RD ++L+V +S + +LP +L +VF
Sbjct: 9 RISDYNYPLPDERIAKFPIAQRDHSKLLVYRQG-----QVSHDVFYNLPEYLPKGALMVF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------------WSVYARPSKVI 109
NNTKVI A+++ + I L P+ W K
Sbjct: 64 NNTKVIQARMHFRK-----DTGALIEVFLLEPAQPSDYELIFQTSEKCAWYCLVGNLKKW 118
Query: 110 KKGDILHFFSQDGQSRL-EATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIAR 168
K+G + GQ + AT T + G I +G +P+PPY+ R
Sbjct: 119 KEGTLRREIEIKGQQVVVTATRGPIHGTSHRIDFEWTGGFSFAEIIDAMGELPIPPYLNR 178
Query: 169 KRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFM 228
+ D YQT Y+KI+GSVAAPTAGLHFT +L+ + + GI+ +TLHVGAGTF
Sbjct: 179 E--TQESDKTTYQTVYSKIKGSVAAPTAGLHFTPEVLAAVDAHGIEREELTLHVGAGTFK 236
Query: 229 PVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET---------- 278
PVK E+ H MH+E + T + + + G ++VGTTS+R LE+
Sbjct: 237 PVKSEEIQGHEMHTEYISVRRDT---IRKLLAHDGCAIAVGTTSVRTLESLYYMGLKVMQ 293
Query: 279 ---ATTEDGIINPWSGF------------------------------TNIFITPGYRFRA 305
A+ +D +N W + T I I PGY +
Sbjct: 294 NPEASEDDLHVNQWEPYDTDTQVSTVESLTALGAWMDAHGLEVLHSSTQIIIAPGYNYHI 353
Query: 306 VDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
V +L++NFH P+STLL+LVSAF + K+Y +A+++ +RF SYGD+SLL
Sbjct: 354 VKMLVTNFHQPQSTLLLLVSAFVKGD-WHKIYDYALANDFRFLSYGDSSLLIP 405
>gi|157412818|ref|YP_001483684.1| queuosine biosynthesis protein [Prochlorococcus marinus str. MIT
9215]
gi|238686829|sp|A8G3B7|QUEA_PROM2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|157387393|gb|ABV50098.1| Queuosine biosynthesis protein [Prochlorococcus marinus str. MIT
9215]
Length = 374
Score = 341 bits (874), Expect = 1e-91, Method: Composition-based stats.
Identities = 120/360 (33%), Positives = 190/360 (52%), Gaps = 12/360 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D+ L PS IA +P R +RLM+V ++ +++ +L D +V
Sbjct: 13 KLEAYDYFLDPSLIASKPCAIRHESRLMIVRNSVLEENCLTNKFTKNLLDEFRKGDLLVV 72
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
NNTKV+ A+L + NR + + R W A+P+K +K + S
Sbjct: 73 NNTKVMKARL---KVQLENRT--LVELLVLERSHECVWLCLAKPAKKLKINRKIILKSPY 127
Query: 122 GQS-RLEATVIDKWNTGEILLVFSISGIELE---RQISLVGTIPLPPYIARKRPIDARDY 177
Q L +D+ TG + F + +L ++ G IPLPPYI ++
Sbjct: 128 AQDINLMVDGVDE-ETGGRFIKFPENITDLNSMNDLLNKYGEIPLPPYIKNSEE-ESFHE 185
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT YA G+VAAPTAGLH + +L+S L G+ + +TLHVG GTF P+ ED +
Sbjct: 186 KSYQTEYATNPGAVAAPTAGLHLSKSLISNLKKKGVIILPITLHVGYGTFKPIDQEDLSN 245
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIF 296
+H E ++ + + +K +I+++GTTS+R LE+ + + P + + ++
Sbjct: 246 LKLHKEWVSVNEEVVEEIKRIKKTDRKIIAIGTTSVRALESCYSHEINDYVPIAKYVDLV 305
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+F+ VD L++NFHLPKS+LL+LVSA G E +Y+ AI +RF+SYGD +
Sbjct: 306 IKPGYKFKVVDGLLTNFHLPKSSLLLLVSAMIGRERLLDLYKKAIKEKFRFFSYGDAMYI 365
>gi|189463178|ref|ZP_03011963.1| hypothetical protein BACCOP_03889 [Bacteroides coprocola DSM 17136]
gi|189430157|gb|EDU99141.1| hypothetical protein BACCOP_03889 [Bacteroides coprocola DSM 17136]
Length = 405
Score = 340 bits (873), Expect = 2e-91, Method: Composition-based stats.
Identities = 126/422 (29%), Positives = 194/422 (45%), Gaps = 89/422 (21%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ ++++ LP RIA P+ RD ++L+V +S+ + + LP ++ +VF
Sbjct: 8 KISDYNYPLPDERIAKFPLPVRDQSKLLVYRHG-----EVSETVFTSLPDYMEPGMLMVF 62
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------------WSVYARPSKVI 109
NNTKVI A+L+ + I + PN W K
Sbjct: 63 NNTKVIQARLHFRKE-----TGALIEIFCLEPIQPNDYVLNFQQTHHAAWLCMIGNLKKW 117
Query: 110 KKG----------DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGT 159
K+G + + G+ + +D + + + + G
Sbjct: 118 KEGPLHKEMTVKGKTITLTATRGECHGTSHWVD--------FTWDNPEVTFADILEVFGE 169
Query: 160 IPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVT 219
+P+PPY+ R D YQT Y+KI+GSVAAPTAGLHFT +L+ L G+ + VT
Sbjct: 170 LPIPPYL--DRETQESDKETYQTVYSKIKGSVAAPTAGLHFTERVLASLKEKGVDLEEVT 227
Query: 220 LHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET- 278
LHVGAGTF PVK E+ + H MH+E ++ T + + + G V+VGTTS+R LE+
Sbjct: 228 LHVGAGTFKPVKSEEIEGHEMHTEYISVNKST---IEKLIAHRGEAVAVGTTSVRTLESL 284
Query: 279 ------------ATTEDGIINPWSGF------------------------------TNIF 296
A+ E+ + W + T I
Sbjct: 285 YYIGVTISQNPDASQEELHVKQWQPYESDVTLSTIESLQCILDYMNRHNLDALHTSTQII 344
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY ++ V +++NFH P+STLL+LVSAF + K+Y +A++H +RF SYGD+SLL
Sbjct: 345 IAPGYEYKIVKRMVTNFHQPQSTLLLLVSAFVKGD-WHKIYDYALAHDFRFLSYGDSSLL 403
Query: 357 FQ 358
Sbjct: 404 IP 405
>gi|313674814|ref|YP_004052810.1| s-adenosylmethionine/tRNA-ribosyltransferase isomerase [Marivirga
tractuosa DSM 4126]
gi|312941512|gb|ADR20702.1| S-adenosylmethionine/tRNA-ribosyltransferase isomerase [Marivirga
tractuosa DSM 4126]
Length = 406
Score = 340 bits (873), Expect = 2e-91, Method: Composition-based stats.
Identities = 132/413 (31%), Positives = 195/413 (47%), Gaps = 75/413 (18%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++ ++LP RIA P+ RD ++L+V I D+ + L N +++FN
Sbjct: 12 LNKYQYELPEERIAKFPLEKRDHSQLLVYQKGN-----IQHQHFYDIKSHLPENSSLIFN 66
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS-------------WSVYARPSKVI 109
NTKVI A+++ + + +I L + P W K
Sbjct: 67 NTKVIPARIHFQK-----QSGAKIEIFLLSPLEPTPEVAQAMLAKKKCIWHCMVGNRKRW 121
Query: 110 KKGDILH--FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIA 167
K D L F ++ G+ ++ AT D + I + + + L+GT PLPPY+
Sbjct: 122 KIQDQLERFFETEYGKIQVTATYAD-YEQNHIQFEWDNDAVPFVEIVELMGTTPLPPYLN 180
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R D YQT Y+K +G+VAAPTAGLHFT +L + ++ +TLHVGAGTF
Sbjct: 181 --RTATDEDKPRYQTVYSKNEGAVAAPTAGLHFTDTILKDI-QKSHSIHELTLHVGAGTF 237
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT------ 281
P+K E+ +H MH E ID T + L I +VGTTS+R LE+A
Sbjct: 238 QPIKAENVLEHDMHCEQIQIDKSTIEFLAQ---SENPITAVGTTSIRSLESAYWFGVQLI 294
Query: 282 ---------------EDGI---------------------INPWSGFTNIFITPGYRFRA 305
E G + G T IFI PGY F+
Sbjct: 295 NKEARTFHITKLYPYEKGFDELPRRKESFQAILNYMKAENVESLHGDTEIFIFPGYEFQV 354
Query: 306 VDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
V+ L++NFH P+STL++L++AF G E+ +K+Y A+ + YRF SYGD+SLL
Sbjct: 355 VNGLITNFHQPESTLILLIAAFIG-EKWQKVYDEALKNDYRFLSYGDSSLLLP 406
>gi|317177197|dbj|BAJ54986.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori F16]
Length = 345
Score = 340 bits (872), Expect = 2e-91, Method: Composition-based stats.
Identities = 121/365 (33%), Positives = 192/365 (52%), Gaps = 28/365 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D++LP IA P+ P++ A+L+V I+ + F N
Sbjct: 1 MKEFDLESYDYNLPKELIANYPILPKEKAKLLVYERRSQK---ITHTTFEHVLDFFPKNA 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+V N+TKVI A+L G + + + H N+ + IK GD + F
Sbjct: 58 LVVLNDTKVIKARLFGSKHALLPSKTT--EVFFHRFFKDNT--ALTQIKGKIKVGDKIFF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILL-----VFSISGIELERQISLVGTIPLPPYIARKRPI 172
+ A V++ + G+ L+ ++ + + + G +PLPPYI KR
Sbjct: 114 -----DAHYYAEVLELLHNGQRLIAFYGNKTPLNQANILKLLEQYGHMPLPPYI--KRAD 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D +YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+
Sbjct: 167 ESLDAHEYQSVFAKHMGAVAAPTASLHFSQNTLEKLL-KDFKHAFLTLHVGAGTFLGVET 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H +H+E+ I + + L + ++ +GTT+LR +E + N +
Sbjct: 226 KDIREHQIHTEVLRIPKKSQEIL----QKSQEVLCIGTTALRSVEYFKRLENP-NQEAFE 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ V+ L++NFHLPKS+LLMLVSA G+E+TK++YQ AI YRFYSYGD
Sbjct: 281 CDIFLHLANPILHVNHLLTNFHLPKSSLLMLVSAMIGLEKTKEIYQIAIEKKYRFYSYGD 340
Query: 353 TSLLF 357
L+
Sbjct: 341 GMLIL 345
>gi|212690635|ref|ZP_03298763.1| hypothetical protein BACDOR_00122 [Bacteroides dorei DSM 17855]
gi|237725170|ref|ZP_04555651.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. D4]
gi|265754309|ref|ZP_06089498.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 3_1_33FAA]
gi|212666735|gb|EEB27307.1| hypothetical protein BACDOR_00122 [Bacteroides dorei DSM 17855]
gi|229436436|gb|EEO46513.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
dorei 5_1_36/D4]
gi|263235018|gb|EEZ20573.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 3_1_33FAA]
Length = 405
Score = 340 bits (872), Expect = 2e-91, Method: Composition-based stats.
Identities = 133/414 (32%), Positives = 198/414 (47%), Gaps = 73/414 (17%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ EF++ LP RIA P+ RD ++L+V +++ + + LP +L S + ++F
Sbjct: 8 KISEFNYPLPDERIAKFPLATRDQSKLLVYRHG-----EVNEDVFTSLPQYLESGELMIF 62
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN------------SWSVYARPSKVI 109
NNTKVI A+L+ + I + PN SW K
Sbjct: 63 NNTKVIQARLHFRKE-----TGALIEVFCLEPIQPNDYVLSFQQTRRCSWLCMIGNLKKW 117
Query: 110 KKGDILHFFSQDG-QSRLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIA 167
KKG + G Q L AT + T + + I + ++G +P+PPY+
Sbjct: 118 KKGTLSRVVDVKGKQIVLSATRGECRGTSHWIDFSWDDDSITFADLLEVIGELPIPPYLN 177
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R+ D YQT Y+KI+GSVAAPTAGLHFT +L+ L GI +TLHVGAGTF
Sbjct: 178 RE--TQESDKETYQTVYSKIKGSVAAPTAGLHFTERVLAALDERGIDREELTLHVGAGTF 235
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK E+ + H MH+E + T + + + G+ ++VGTTS+R LE+
Sbjct: 236 KPVKSEEIEGHEMHTEYISVSKHT---IEKLIAHNGKAIAVGTTSVRTLESLYYIGVLIH 292
Query: 279 ----ATTEDGIINPWSGF------------------------------TNIFITPGYRFR 304
A + + W + T I I PGY+++
Sbjct: 293 HNPDAAQNELHVQQWMPYEDKNELTPVEALQQILDYLHRHEMEALHSSTQIIIAPGYQYK 352
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
V +++NFH P+STLL+LVSAF +K+Y +A+ H +RF SYGD+SLL
Sbjct: 353 IVRKMVTNFHQPQSTLLLLVSAFV-RGNWRKIYDYALEHDFRFLSYGDSSLLIP 405
>gi|108562810|ref|YP_627126.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori HPAG1]
gi|122386664|sp|Q1CUC0|QUEA_HELPH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|107836583|gb|ABF84452.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori HPAG1]
Length = 345
Score = 340 bits (872), Expect = 2e-91, Method: Composition-based stats.
Identities = 122/365 (33%), Positives = 191/365 (52%), Gaps = 28/365 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D+ LP IA PV P++ A+L+V I+ + F N
Sbjct: 1 MKEFDLESYDYYLPKELIANYPVLPKEKAKLLVYERRSQK---ITHTTFEHVLDFFPKNA 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+V N+TKV+ A+L G + + + H N+ + IK GD + F
Sbjct: 58 LVVLNDTKVMKARLFGSKHALLPSKTT--EVFFHRFFKDNT--ALTQIKGKIKAGDKIFF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILL-----VFSISGIELERQISLVGTIPLPPYIARKRPI 172
+ A V++ + G+ L+ ++ + + + G +PLPPYI KR
Sbjct: 114 -----DANYHAEVLELLHNGQRLIAFYNHKTPLNQENILKLLEQYGHMPLPPYI--KRTD 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D +YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+
Sbjct: 167 ESLDAHEYQSVFAKHIGAVAAPTASLHFSQNTLEKLL-KDFKHAFLTLHVGAGTFLGVET 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H +H+EI I + + L + ++ +GTT+LR +E N S
Sbjct: 226 KDIREHQIHTEILHIPKKSQEILRESQE----VLCIGTTALRSVEYFKRLKNS-NQESFE 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ + V+ L++NFHLPKS+LLMLVSA G+E+TK++Y+ AI YRFYSYGD
Sbjct: 281 CDIFLHLANPIQHVNYLLTNFHLPKSSLLMLVSAMIGLEKTKEIYKIAIEKKYRFYSYGD 340
Query: 353 TSLLF 357
L+
Sbjct: 341 GMLIL 345
>gi|206603316|gb|EDZ39796.1| Putative queuosine biosynthesis protein [Leptospirillum sp. Group
II '5-way CG']
Length = 385
Score = 339 bits (871), Expect = 3e-91, Method: Composition-based stats.
Identities = 117/359 (32%), Positives = 171/359 (47%), Gaps = 22/359 (6%)
Query: 4 KEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNN 63
E+D+DLP RI L P R +RL+V P + D FL D +V N+
Sbjct: 39 DEYDYDLPEDRIRLYPPPTRGESRLLVAGRESGVPYF---GTMEDFSRFLFPGDLLVLND 95
Query: 64 TKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQ 123
++V+ A++ ++I P+ + G G
Sbjct: 96 SRVLPARVF-----LRAPTGRKIELLFLNPQDPSPVRFLGKG-----IGSSSTLSLPGGG 145
Query: 124 SRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ + K E G E L + G +PLPPYI + R D YQT
Sbjct: 146 KVRDILYLPK----EGCFQGIYEGEEGLLSWLESHGEMPLPPYIRKARDHHPSDRDRYQT 201
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
+++ GSVAAPTAGLHFT LL +L G++ VTLHVG GTF P+ D H+MH+
Sbjct: 202 VFSRHPGSVAAPTAGLHFTETLLEKLKDKGVETATVTLHVGIGTFRPLGPGGIDQHVMHA 261
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSG-FTNIFITPGY 301
E + T+Q + + RG R+ +VGTT +R LET + +T +FI PG+
Sbjct: 262 ERFLVPEETSQKIEDARRRGNRVFAVGTTVMRTLETWGQH--PVRAAVPTWTRLFIRPGF 319
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAF-CGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
FR VD L++NFH P+STL++LV +F G + +Y+ A+ + F SYGD L+ +
Sbjct: 320 PFRVVDGLLTNFHQPRSTLVVLVDSFLGGRGRWRSLYRQALEEGFMFLSYGDAMLIVPE 378
>gi|261839233|gb|ACX98998.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori 52]
Length = 345
Score = 339 bits (871), Expect = 3e-91, Method: Composition-based stats.
Identities = 122/365 (33%), Positives = 191/365 (52%), Gaps = 28/365 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D+DLP IA P+ P++ A+L+V I+ + F N
Sbjct: 1 MKEFDLESYDYDLPKELIANYPILPKEKAKLLVYERRSQK---ITHTTFEHVLDFFPKNA 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+V N+TKVI A+L G + + + H N + IK GD + F
Sbjct: 58 LVVLNDTKVIKARLFGSKHAFLPSKTT--EVFFHRFFENNR--ALTQIKGKIKVGDKIFF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILL-----VFSISGIELERQISLVGTIPLPPYIARKRPI 172
+ A V++ + G+ L+ ++ + + + G +PLPPYI KR
Sbjct: 114 -----DTHYYAEVLELLHNGQRLIAFYDNKTPLNQANILKLLEQHGHMPLPPYI--KRAD 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D +YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+
Sbjct: 167 ESLDTHEYQSVFAKHMGAVAAPTASLHFSQNTLEKLL-KDFKHAFLTLHVGAGTFLGVET 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H +H+E+ I + + L + I+ +GTT+LR +E + N +
Sbjct: 226 KDIREHQIHTEMLRIPKKSQEIL----QKSQEILCIGTTALRSVEYFKRLENP-NQEAFE 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ V+ L++NFHLPKS+LLMLVSA G+E+TK++Y+ AI YRFYSYGD
Sbjct: 281 CDIFLHLANPILHVNYLLTNFHLPKSSLLMLVSAMVGLEKTKEIYKIAIEKKYRFYSYGD 340
Query: 353 TSLLF 357
L+
Sbjct: 341 GMLIL 345
>gi|254779075|ref|YP_003057180.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori B38]
gi|254000986|emb|CAX28930.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein queA) [Helicobacter pylori B38]
Length = 345
Score = 339 bits (871), Expect = 3e-91, Method: Composition-based stats.
Identities = 122/365 (33%), Positives = 189/365 (51%), Gaps = 28/365 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D+ LP IA PV P++ A+L+V I+ + F N
Sbjct: 1 MKEFDLESYDYYLPKELIANYPVLPKEKAKLLVYERRSQT---ITHTTFEHVLDFFPKNA 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
IV N+TKVI A+L G + + + H N+ + IK GD + F
Sbjct: 58 LIVLNDTKVIKARLFGSKHAFLPSKMT--EVFFHRFFKDNT--ALTQIKGKIKVGDKIFF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILL-----VFSISGIELERQISLVGTIPLPPYIARKRPI 172
+ A V++ + G+ L+ ++ + + + G +PLPPYI KR
Sbjct: 114 -----DANYYAEVLELLHNGQRLIAFYDHKTPLNQENILKLLEQYGHMPLPPYI--KRAD 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D +YQ+ +AK G+VAAPTA LHF+ + L +L+ K F+TLHVGAGTF+ V+
Sbjct: 167 ESLDAHEYQSVFAKHIGAVAAPTASLHFSQHGLEKLL-KDFKHAFLTLHVGAGTFLGVET 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H +H+E+ I + + L I+ +GTT+LR +E N S
Sbjct: 226 KDIREHQIHTEVLHIPKKSQEIL----QESQEILCIGTTALRSVEYFKRLKNP-NQESFE 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ + + L++NFHLPKS+LLMLVSA G+E+TK++Y+ AI YRFYSYGD
Sbjct: 281 CDIFLHLANPIQHANYLLTNFHLPKSSLLMLVSAMIGLEKTKEIYKIAIEKKYRFYSYGD 340
Query: 353 TSLLF 357
L+
Sbjct: 341 GMLIL 345
>gi|210134580|ref|YP_002301019.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori P12]
gi|226713841|sp|B6JKW1|QUEA_HELP2 RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|210132548|gb|ACJ07539.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori P12]
Length = 345
Score = 339 bits (871), Expect = 3e-91, Method: Composition-based stats.
Identities = 121/365 (33%), Positives = 191/365 (52%), Gaps = 28/365 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D+ LP IA PV P++ A+L+V I+ + F N
Sbjct: 1 MKEFDLESYDYYLPKELIANYPVLPKEKAKLLVYDRRSQT---ITHTTFEHVLDFFPKNA 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+V N+TKV+ A+L G + + + H N+ + IK GD + F
Sbjct: 58 LVVLNDTKVMKARLFGSKHAFLPSKTT--EVFFHRFFKDNT--ALTQIKGKIKAGDKIFF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVF-----SISGIELERQISLVGTIPLPPYIARKRPI 172
A V++ + G+ L+ F ++ + + + G +PLPPYI KR
Sbjct: 114 -----DENYCAEVLELLHNGQRLIAFYDNQTPLNQENILKLLEQYGHMPLPPYI--KRAD 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D +YQ+ +AK G+VAAPTA LHF+ + L +L+ K F+TLHVGAGTF+ V+
Sbjct: 167 ESLDAHEYQSVFAKHIGAVAAPTASLHFSQHTLEKLL-KDFKHAFLTLHVGAGTFLGVET 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H +H+E+ I + + L + I+ +GTT+LR +E + N +
Sbjct: 226 KDIREHQIHTEVLRIPKKSQEIL----QKSQEILCIGTTALRSVEYFKRLENP-NQEAFE 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ V+ L++NFHLPKS+LLMLVSA G+E+TK++Y+ AI YRFYSYGD
Sbjct: 281 CDIFLHLANPILHVNYLLTNFHLPKSSLLMLVSAMIGLEKTKEIYKIAIEKKYRFYSYGD 340
Query: 353 TSLLF 357
L+
Sbjct: 341 GMLIL 345
>gi|317012224|gb|ADU82832.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori Lithuania75]
Length = 345
Score = 339 bits (870), Expect = 4e-91, Method: Composition-based stats.
Identities = 122/365 (33%), Positives = 189/365 (51%), Gaps = 28/365 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D+ LP IA P+ P++ A+L+V I+ + F N
Sbjct: 1 MKEFDLESYDYYLPKELIANYPILPKEKAKLLVYERRSQK---ITHTTFEHVLDFFPKNA 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
IV N+TKVI A+L G + + + H N+ + IK GD + F
Sbjct: 58 LIVLNDTKVIKARLFGSKHAFLPSKTT--EVFFHRFFKNNT--ALTQIKGKIKVGDKIFF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILL-----VFSISGIELERQISLVGTIPLPPYIARKRPI 172
+ A V++ + G+ L+ ++ + + + G +PLPPYI KR
Sbjct: 114 -----DTNYHAEVLELLHNGQRLIAFYDHKTPLNQENILKLLEQYGHMPLPPYI--KRAD 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D +YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+
Sbjct: 167 ESLDAHEYQSVFAKHMGAVAAPTASLHFSQNTLEKLL-KDFKHAFLTLHVGAGTFLGVET 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H +H+E+ I + + L I+ +GTT+LR +E N S
Sbjct: 226 KDIREHQIHTEVLHIPKKSQEIL----QESQEILCIGTTALRSVEYFKRLKNP-NQESFE 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ V+ L++NFHLPKS+LLMLVSA G+++TK++Y+ AI YRFYSYGD
Sbjct: 281 CDIFLHLANPILHVNYLLTNFHLPKSSLLMLVSAMIGLDKTKEIYKIAIEKKYRFYSYGD 340
Query: 353 TSLLF 357
L+
Sbjct: 341 GMLIL 345
>gi|109947703|ref|YP_664931.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter acinonychis str. Sheeba]
gi|123362591|sp|Q17WP4|QUEA_HELAH RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|109714924|emb|CAJ99932.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter acinonychis str. Sheeba]
Length = 345
Score = 339 bits (869), Expect = 5e-91, Method: Composition-based stats.
Identities = 120/365 (32%), Positives = 189/365 (51%), Gaps = 28/365 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D+ LP IA P+ P++ A+L++ + I+ + F N
Sbjct: 1 MKEFDLESYDYHLPKELIANYPILPKEKAKLLIYERHSQK---ITHTTFEHVLDFFPKNT 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+V N+TKVI A+L G ++ + + H + N+ + IK GD + F
Sbjct: 58 LVVLNDTKVIKARLFGSKYAFLPSKTT--EVFFHRFLKNNT--ALTQIKGKIKVGDKIFF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILL-----VFSISGIELERQISLVGTIPLPPYIARKRPI 172
A V++ N G+ L+ + + + + G +PLPPYI KR
Sbjct: 114 -----DENHYAEVLELLNNGQRLIAFYDNKTPLDQASILKLLEQYGHMPLPPYI--KRAD 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D ++YQ+ +AK G+VAAPTA LHF+ N L L+ K F+TLHVGAGTF V+
Sbjct: 167 ESLDTLEYQSVFAKHIGAVAAPTASLHFSQNTLENLL-KDFKHTFLTLHVGAGTFASVET 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H +H+E+ I + + L + I+ +GTT+LR +E +
Sbjct: 226 KDIREHQIHTEVLHIPKKSQEIL----QKSQEILCIGTTALRSVEYFKRLK-TPKQEAFE 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ + + L++NFHLPKS+LLMLVSA G+E+TK++YQ AI YRFYSYGD
Sbjct: 281 CDIFLHLANPIQHANYLLTNFHLPKSSLLMLVSAMIGLEKTKEIYQIAIEKKYRFYSYGD 340
Query: 353 TSLLF 357
L+
Sbjct: 341 GMLIL 345
>gi|308184187|ref|YP_003928320.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori SJM180]
gi|308060107|gb|ADO02003.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori SJM180]
Length = 345
Score = 339 bits (869), Expect = 5e-91, Method: Composition-based stats.
Identities = 121/365 (33%), Positives = 192/365 (52%), Gaps = 28/365 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D+ LP IA PV P++ A+L+V I+ + F N
Sbjct: 1 MKEFDLESYDYYLPKELIANYPVLPKEKAKLLVYERRSQT---ITHTTFEHVLDFFPKNA 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+V N+TKV+ A+L G + + + H N+ + IK GD + F
Sbjct: 58 LVVLNDTKVMKARLFGSKHAFLPSKTT--EVFFHRFFKNNT--ALTQIKGKIKVGDKIFF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVF-----SISGIELERQISLVGTIPLPPYIARKRPI 172
+ A V++ + G+ L+ F ++ + + + G +PLPPYI KR
Sbjct: 114 -----DANYHAEVLELLHNGQRLIAFYDNQTPLNQENILKLLEQYGHMPLPPYI--KRAD 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D +YQ+ +AK G+VAAPTA LHF+ + L +L+ K F+TLHVGAGTF+ V+
Sbjct: 167 ESLDAHEYQSVFAKHIGAVAAPTASLHFSQHSLEKLL-KDFKHAFLTLHVGAGTFLSVET 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H +H+E+ I + + L + I+ +GTT+LR +E + N +
Sbjct: 226 KDIREHQIHTEVLRIPKKSQEIL----QKSQEILCIGTTALRSVEYFKRLENP-NQEAFE 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ V+ L++NFHLPKS+LLMLVSA G+E+TK++Y+ AI YRFYSYGD
Sbjct: 281 CDIFLHLANPILHVNYLLTNFHLPKSSLLMLVSAMIGLEKTKEIYKIAIEKKYRFYSYGD 340
Query: 353 TSLLF 357
L+
Sbjct: 341 GMLIL 345
>gi|317181727|dbj|BAJ59511.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori F57]
Length = 345
Score = 339 bits (869), Expect = 6e-91, Method: Composition-based stats.
Identities = 121/365 (33%), Positives = 191/365 (52%), Gaps = 28/365 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D+DLP IA P+ P++ A+L+V I+ + F N
Sbjct: 1 MKEFDLESYDYDLPKELIANYPILPKEKAKLLVYERRSQK---ITHTTFEHVLDFFPKNA 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+V N+TKVI A+L G + + + H N+ + IK GD + F
Sbjct: 58 LVVLNDTKVIKARLFGSKHAFLPSKTT--EVFFHRFFKNNT--ALTQIKGKIKVGDKIFF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILL-----VFSISGIELERQISLVGTIPLPPYIARKRPI 172
+ A V++ + G+ L+ ++ + + + G +PLPPYI KR
Sbjct: 114 -----DAHYYAEVLELLHNGQRLIAFYGNKTPLNQANILKLLEQYGHMPLPPYI--KRAD 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D +YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+
Sbjct: 167 ESLDAHEYQSVFAKHIGAVAAPTASLHFSQNTLEKLL-KDFKHAFLTLHVGAGTFLGVET 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H +H+E+ I + + L + ++ +GTT+LR +E + N +
Sbjct: 226 KDIREHQIHTEVLRIPKKSQEIL----QKSQEVLCIGTTALRSVEYFKRLENP-NQEAFE 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ V+ L++NFHLPKS+LLMLVS G+E+TK++YQ AI YRFYSYGD
Sbjct: 281 CDIFLHLANPILHVNHLLTNFHLPKSSLLMLVSTMVGLEKTKEIYQIAIEKKYRFYSYGD 340
Query: 353 TSLLF 357
L+
Sbjct: 341 GMLIL 345
>gi|208434332|ref|YP_002265998.1| S-adenosyl methionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori G27]
gi|226713842|sp|B5ZAF2|QUEA_HELPG RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|208432261|gb|ACI27132.1| S-adenosyl methionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori G27]
Length = 345
Score = 338 bits (868), Expect = 6e-91, Method: Composition-based stats.
Identities = 122/365 (33%), Positives = 191/365 (52%), Gaps = 28/365 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D+ LP IA PV P++ A+L+V I+ + F N
Sbjct: 1 MKEFDLESYDYYLPKELIANYPVLPKEKAKLLVYERRSQT---ITHTTFEHVLDFFPKNA 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
IV N+TKV+ A+L G + + + H N+ + IK GD + F
Sbjct: 58 LIVLNDTKVMKARLFGSKHAFLPSKTT--EVFFHRFFKDNT--ALTQIKGKIKVGDKIFF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVF-----SISGIELERQISLVGTIPLPPYIARKRPI 172
A V++ + G+ L+ F ++ + + + G +PLPPYI KR
Sbjct: 114 -----DENYYAEVLELLHNGQRLIAFYDNQTPLNQENILKLLEQYGHMPLPPYI--KRAD 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D +YQ+ +AK G+VAAPTA LHF+ + L +L+ K F+TLHVGAGTF+ V+
Sbjct: 167 ESLDAHEYQSVFAKHTGAVAAPTASLHFSQHGLEKLL-KDFKHAFLTLHVGAGTFLGVET 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H +H+E+ I + + L + I+ +GTT+LR +E + N +
Sbjct: 226 KDIREHQIHTEVLRIPKKSQEIL----QKSQEILCIGTTALRSVEYFKRLENP-NQEAFE 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ V+ L++NFHLPKS+LLMLVSA G+E+TK++Y+ AI YRFYSYGD
Sbjct: 281 CDIFLHLANPILHVNYLLTNFHLPKSSLLMLVSAMIGLEKTKEIYKIAIEKKYRFYSYGD 340
Query: 353 TSLLF 357
L+
Sbjct: 341 GMLIL 345
>gi|237709677|ref|ZP_04540158.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 9_1_42FAA]
gi|229456313|gb|EEO62034.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 9_1_42FAA]
Length = 405
Score = 338 bits (868), Expect = 7e-91, Method: Composition-based stats.
Identities = 133/414 (32%), Positives = 198/414 (47%), Gaps = 73/414 (17%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ EF++ LP RIA P+ RD ++L+V +++ + + LP +L S + ++F
Sbjct: 8 KISEFNYPLPDERIAKFPLATRDQSKLLVYRHG-----EVNEDVFTSLPQYLESGELMIF 62
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN------------SWSVYARPSKVI 109
NNTKVI A+L+ + I + PN SW K
Sbjct: 63 NNTKVIQARLHFRKE-----TGALIEVFCLEPIQPNDYVLSFQQTRRCSWLCMIGNLKKW 117
Query: 110 KKGDILHFFSQDG-QSRLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIA 167
KKG + G Q L AT + T + + I + ++G +P+PPY+
Sbjct: 118 KKGMLSRVVDVKGKQIVLSATRGECRGTSHWIDFSWDDDSITFADLLEVIGELPIPPYLN 177
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R+ D YQT Y+KI+GSVAAPTAGLHFT +L+ L GI +TLHVGAGTF
Sbjct: 178 RE--TQESDKETYQTVYSKIKGSVAAPTAGLHFTERVLAALDERGIDREELTLHVGAGTF 235
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK E+ + H MH+E + T + + + G+ ++VGTTS+R LE+
Sbjct: 236 KPVKSEEIEGHEMHTEYISVSKHT---IEKLIAHNGKAIAVGTTSVRTLESLYYIGVLIH 292
Query: 279 ----ATTEDGIINPWSGF------------------------------TNIFITPGYRFR 304
A + + W + T I I PGY+++
Sbjct: 293 HNPDAAQNELHVQQWMPYEDKNELTPVEALQQILDYLHRHEMEALHSNTQIIIAPGYQYK 352
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
V +++NFH P+STLL+LVSAF +K+Y +A+ H +RF SYGD+SLL
Sbjct: 353 IVRKMVTNFHQPQSTLLLLVSAFV-RGNWRKIYDYALEHDFRFLSYGDSSLLIP 405
>gi|317010661|gb|ADU84408.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori SouthAfrica7]
Length = 345
Score = 338 bits (868), Expect = 7e-91, Method: Composition-based stats.
Identities = 125/365 (34%), Positives = 189/365 (51%), Gaps = 28/365 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D+ LP IA P+ P++ A+L+V + I+ + F N
Sbjct: 1 MKEFDLESYDYHLPKELIANYPILPKEKAKLLVYERHSQT---ITHTTFEHVLDFFPKNA 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
IV N+TKV+ A+L G + + + H NS A+ IK GD + F
Sbjct: 58 LIVLNDTKVMKARLFGSKHAFLPSKTT--EVFFHRFFKDNS--ALAQIKGKIKVGDRIFF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELER-----QISLVGTIPLPPYIARKRPI 172
A V++ + G+ L+ F L++ + G +PLPPYI KR
Sbjct: 114 -----DGSHYAEVLELLHNGQRLIAFYDHKTPLDQASILKLLEQYGHMPLPPYI--KRAD 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D +YQ+ +AK G+VAAPTA LHF+ N L L+ K F+TLHVGAGTF V+
Sbjct: 167 ESLDAREYQSVFAKHIGAVAAPTASLHFSQNTLENLL-KDFKHTFLTLHVGAGTFASVET 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H +H+E+ I + + L + I+ +GTT+LR +E I +
Sbjct: 226 KDIREHQIHTEVLHIPKKSQEIL----QKSQEILCIGTTALRSVEYFKRLK-IPKQEAFE 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ + + L++NFHLPKS+LLMLVSA G+E+TK++YQ AI YRFYSYGD
Sbjct: 281 CDIFLHLANPIQHANYLLTNFHLPKSSLLMLVSAMIGLEKTKEIYQIAIEKKYRFYSYGD 340
Query: 353 TSLLF 357
L+
Sbjct: 341 GMLIL 345
>gi|15645676|ref|NP_207853.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori 26695]
gi|3914525|sp|O25702|QUEA_HELPY RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|2314205|gb|AAD08102.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queA)
[Helicobacter pylori 26695]
Length = 345
Score = 338 bits (868), Expect = 8e-91, Method: Composition-based stats.
Identities = 123/365 (33%), Positives = 190/365 (52%), Gaps = 28/365 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D+ LP IA PV P++ A+L+V I+ + F N
Sbjct: 1 MKEFDLESYDYYLPKELIASYPVLPKEKAKLLVYERRSQK---ITHTTFEHVLDFFPKNA 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
IV N+TKVI A+L G + + + H N+ + IK GD + F
Sbjct: 58 LIVLNDTKVIKARLFGSKHAFLPSKTT--EVFFHRFFKNNT--ALTQIKGKIKVGDKIFF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILL-----VFSISGIELERQISLVGTIPLPPYIARKRPI 172
+ A V++ + G+ L+ ++ + + + G +PLPPYI KR
Sbjct: 114 -----DANYHAEVLELLHNGQRLIAFYDNKTPLNQENILKLLEQYGHMPLPPYI--KRAD 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D +YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+
Sbjct: 167 ESLDAHEYQSVFAKHMGAVAAPTASLHFSQNTLEKLL-KDFKHAFLTLHVGAGTFLSVET 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H +H+E+ I + + L + I+ VGTT+LR +E + N +
Sbjct: 226 KDIREHQIHTEVLRIPKKSQEIL----QKSQEILCVGTTALRSVEYFKRLENP-NQEAFE 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ V+ L++NFHLPKS+LLMLVS G+E+TK++Y+ AI YRFYSYGD
Sbjct: 281 CDIFLHFANPILHVNYLLTNFHLPKSSLLMLVSTMIGLEKTKEIYKTAIEKKYRFYSYGD 340
Query: 353 TSLLF 357
L+
Sbjct: 341 GMLIL 345
>gi|294055283|ref|YP_003548941.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Coraliomargarita akajimensis DSM 45221]
gi|293614616|gb|ADE54771.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Coraliomargarita akajimensis DSM 45221]
Length = 361
Score = 338 bits (867), Expect = 8e-91, Method: Composition-based stats.
Identities = 137/377 (36%), Positives = 192/377 (50%), Gaps = 36/377 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M FDF LP IA P RD++RLMV++ + ++ +D+ FL +N
Sbjct: 1 MDASLFDFHLPNECIAQEPAATRDASRLMVINRSTR---EVNHVHFADIGGFLPTNARFF 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN-SWSVYARPSKVIKKGDILHFFS 119
NN V+ A++ G R ++ C L +W RP K + F
Sbjct: 58 RNNAAVLKARIYGQRPS-----GGKVECLLLQPAEDALTWWCLLRPGKKAAQ----TGFE 108
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSIS-GIELERQISLVGTIPLPPYIARK--RPIDARD 176
DG+ R A V++ + G + F + + +G +PLPPYIAR+ P A D
Sbjct: 109 MDGEYR--AEVLEAGSNGNYKVRFHLERNETVTDLSERLGIMPLPPYIAREQDDPRRAAD 166
Query: 177 YVDYQTTYAK--IQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
YQT YA + +VAAPTAGLHFT L+ +L G + + +TL VG GTF P++VE
Sbjct: 167 NERYQTVYADYAKRVAVAAPTAGLHFTPELIDQLSQAGAEFHDLTLQVGIGTFHPIQVEQ 226
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-----INPW 289
+DH +H E I + Q+L S G V+VGTTS+R +E A + + P
Sbjct: 227 IEDHNIHHEWYEIPSAAFQSLQD--SSSGPRVAVGTTSVRSIEDALSRTQQSPESCLTPT 284
Query: 290 ---SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFC------GIEETKKMYQHA 340
+IFI P +F AVD +++NFHLPKSTLL LVSAF GI+ K++Y A
Sbjct: 285 GSVQAEADIFIYPPAKFAAVDHMITNFHLPKSTLLCLVSAFLTPGSTDGIDWLKELYADA 344
Query: 341 ISHAYRFYSYGDTSLLF 357
I+ YRFYSYGD L+
Sbjct: 345 IARKYRFYSYGDAMLIL 361
>gi|317009031|gb|ADU79611.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori India7]
Length = 345
Score = 338 bits (867), Expect = 8e-91, Method: Composition-based stats.
Identities = 121/365 (33%), Positives = 191/365 (52%), Gaps = 28/365 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D+ LP IA P+ P++ A+L+V I+ + F N
Sbjct: 1 MKEFDLESYDYHLPKELIANYPILPKEKAKLLVYERRSQK---ITHTTFEHVLDFFPKNA 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+V N+TKV+ A+L G + + + H N+ + IK GD + F
Sbjct: 58 LVVLNDTKVMKAKLFGSKHAFLPSKTT--EVFFHRFFKNNT--ALTQIKGKIKVGDKIFF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVF-----SISGIELERQISLVGTIPLPPYIARKRPI 172
+ A V++ + G+ L+ F ++ + + + G +PLPPYI KR
Sbjct: 114 -----DANYYAEVLELLHNGQRLIAFYDNQTPLNQENILKLLEQYGHMPLPPYI--KRAD 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D +YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+
Sbjct: 167 ESLDAHEYQSVFAKHTGAVAAPTASLHFSQNTLEKLL-KDFKHAFLTLHVGAGTFLSVET 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H +H+E+ I + + L I+ +GTT+LR +E N +
Sbjct: 226 KDIREHQIHTEVLRIPKKSQKIL----QESQEILCIGTTALRSVEYFKRLKNP-NQEAFE 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ + V+ L++NFHLPKS+LLMLVSA G+E+TK++Y+ AI YRFYSYGD
Sbjct: 281 CDIFLHLANPIQHVNHLLTNFHLPKSSLLMLVSAMIGLEKTKEIYKIAIEKKYRFYSYGD 340
Query: 353 TSLLF 357
L+
Sbjct: 341 GMLIL 345
>gi|33239854|ref|NP_874796.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
[Prochlorococcus marinus subsp. marinus str. CCMP1375]
gi|46576945|sp|Q7VDH4|QUEA_PROMA RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|33237380|gb|AAP99448.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
[Prochlorococcus marinus subsp. marinus str. CCMP1375]
Length = 370
Score = 338 bits (867), Expect = 9e-91, Method: Composition-based stats.
Identities = 131/362 (36%), Positives = 192/362 (53%), Gaps = 12/362 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D++L S IA P+ PR +AR++ V L V DL A L + D +V
Sbjct: 9 LLSSYDYELNSSLIAQEPIEPRHNARMLHVSKRSGEGLKAFHLKVWDLLAELRAGDLLVM 68
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T+V+ A+L R + L W A+P+K ++ GD + S
Sbjct: 69 NDTRVLKARLKVR-----LRNGTFVELFLLEPKGQGRWLCLAKPAKKLRAGDCIWMESSG 123
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIE---LERQISLVGTIPLPPYIARKRPIDARDYV 178
+S + +TG ++ F + +E + G IPLPPYI R D +D
Sbjct: 124 EESIPLKIIDQDISTGGRIVQFPELFSDRRKIEPLLEKFGEIPLPPYINR---CDFKDVN 180
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YA G+VAAPTAGLH + L L GIK VTLHVG GTF P+ E+ +
Sbjct: 181 RYQTRYASTPGAVAAPTAGLHLSDQFLEALSQQGIKDAKVTLHVGLGTFRPLVEENLANL 240
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWSGFTNIFI 297
+HSE + A+ + RGGR++++GTT++R LE + DG + P+ G ++ I
Sbjct: 241 HLHSEWVEVKEEVVSAIKECRDRGGRVIAIGTTTVRSLEASFLAGDGCLKPFKGEVDLVI 300
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+F VD L++NFHLPKS+LL+LVSA G E ++Y+ AI YRF+SYGD +
Sbjct: 301 KPGYKFGIVDGLLTNFHLPKSSLLLLVSALIGRENLLELYKEAIDQKYRFFSYGDAMFIS 360
Query: 358 QK 359
+
Sbjct: 361 PE 362
>gi|307637081|gb|ADN79531.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori 908]
gi|325995672|gb|ADZ51077.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori 2018]
gi|325997268|gb|ADZ49476.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori 2017]
Length = 345
Score = 338 bits (867), Expect = 1e-90, Method: Composition-based stats.
Identities = 123/365 (33%), Positives = 190/365 (52%), Gaps = 28/365 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D+ LP IA PV P++ A+L+V I+ + F N
Sbjct: 1 MKEFDLESYDYHLPKELIANYPVLPKEKAKLLVYERRSQT---ITHTTFEHVLDFFPKNA 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+V N+TKVI A+L G + + + H N+ + IK GD + F
Sbjct: 58 LVVLNDTKVIKARLFGSKHAFLPSKTT--EVFFHRFFKGNT--ALTQIKGKIKAGDKIFF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVF-----SISGIELERQISLVGTIPLPPYIARKRPI 172
A V++ + G+ L+ F ++ + + + G +PLPPYI KR
Sbjct: 114 -----DENYYAEVLELLHNGQRLIAFYDNQTPLTQENILKLLEQYGHMPLPPYI--KRAD 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D +YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+
Sbjct: 167 ESLDVHEYQSVFAKHIGAVAAPTASLHFSQNTLEKLL-KDFKHAFLTLHVGAGTFLSVET 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D +H +H+E+ I + + L I+ +GTT+LR +E N S
Sbjct: 226 KDIREHQIHTEVLHIPKKSQEIL----QESQEILCIGTTALRSVEYFKRLKNP-NQESFE 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ + V+ L++NFHLPKS+LL+LVSA G+E+TK++Y+ AI YRFYSYGD
Sbjct: 281 CDIFLHLANPIQHVNHLLTNFHLPKSSLLILVSAMIGLEKTKEIYKIAIEKKYRFYSYGD 340
Query: 353 TSLLF 357
L+
Sbjct: 341 GMLIL 345
>gi|294775846|ref|ZP_06741346.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides vulgatus PC510]
gi|294450306|gb|EFG18806.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides vulgatus PC510]
Length = 405
Score = 337 bits (866), Expect = 1e-90, Method: Composition-based stats.
Identities = 134/414 (32%), Positives = 199/414 (48%), Gaps = 73/414 (17%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ EF++ LP RIA P+ RD ++L+V +S+ + + LP +L S + ++F
Sbjct: 8 KISEFNYPLPDERIAKFPLATRDQSKLLVYRHG-----EVSEDIFTSLPHYLESGELMIF 62
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN------------SWSVYARPSKVI 109
NNTKVI A+L+ + I V PN SW K
Sbjct: 63 NNTKVIQARLHFRKE-----TGALIEVFCLEPVQPNDYVLNFQQTRQCSWLCMIGNLKKW 117
Query: 110 KKGDILHFFSQDG-QSRLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIA 167
K+G + + G Q L AT + T + + I + + G +P+PPY+
Sbjct: 118 KEGTLSRIVNVKGKQIVLSATRGECKGTSHWIDFSWDDDTITFADLLEVAGELPIPPYLN 177
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R+ D YQT Y+KI+GSVAAPTAGLHFT +L+ L GI +TLHVGAGTF
Sbjct: 178 RE--TQESDKETYQTVYSKIKGSVAAPTAGLHFTERVLAALDERGIDREELTLHVGAGTF 235
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK E+ + H MH+E + T + + + G+ ++VGTTS+R LE+
Sbjct: 236 KPVKSEEIEGHEMHTEYISVSKHT---IEKLIAHNGKAIAVGTTSVRTLESLYYIGVLIS 292
Query: 279 ----ATTEDGIINPWSGF------------------------------TNIFITPGYRFR 304
AT ++ + W + T I I PGY ++
Sbjct: 293 HNPDATQDELHVQQWMPYEDKNDLTPVEALQQILDYLNRHEMEALHSSTQIIIAPGYTYK 352
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
V +++NFH P+STLL+LVSAF +++Y +A+ H +RF SYGD+SLL
Sbjct: 353 IVKKMVTNFHQPQSTLLLLVSAFV-KGNWRRIYDYALGHDFRFLSYGDSSLLIP 405
>gi|189463863|ref|ZP_03012648.1| hypothetical protein BACINT_00196 [Bacteroides intestinalis DSM
17393]
gi|189438813|gb|EDV07798.1| hypothetical protein BACINT_00196 [Bacteroides intestinalis DSM
17393]
Length = 409
Score = 337 bits (866), Expect = 1e-90, Method: Composition-based stats.
Identities = 133/417 (31%), Positives = 196/417 (47%), Gaps = 76/417 (18%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ EF++ LP RIA P+ RD ++L+V +S+ + LP++L + ++F
Sbjct: 9 RISEFNYPLPDERIAKFPLPVRDQSKLLVYRHG-----EVSEDRFTSLPSYLPAGSLMIF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------------WSVYARPSKVI 109
NNTKVI A+L+ + I + PN W K
Sbjct: 64 NNTKVIQARLHFRK-----DTGALIEVFCLEPIEPNDYVLNFQQTEHAAWLCMIGNLKKW 118
Query: 110 KKGDILHFFSQDGQS-RLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIA 167
K+G + + GQ L AT + T + ++ I + + G +P+PPY+
Sbjct: 119 KEGTLKREMTVKGQPITLTATRGECHGTSHWVDFRWNNPEITFADILEVFGELPIPPYLN 178
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R D YQT Y+KI+GSVAAPTAGLHFT +L L GI + +TLHVGAGTF
Sbjct: 179 RD--TQESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALKEKGIDLEELTLHVGAGTF 236
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK E+ + H MH+E + T + + + G+ ++VGTTS+R LE+
Sbjct: 237 KPVKSEEIEGHEMHTEYISVSRGT---IEKLIAHDGKAIAVGTTSVRTLESLYHIGVTLL 293
Query: 279 ----ATTEDGIINPWSGF---------------------------------TNIFITPGY 301
AT E+ + W + T I I PGY
Sbjct: 294 KNPDATEEELHVRQWQPYETAEEAANITSVKALQAILDYLNHHKMETLHTSTQIIIAPGY 353
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
++ V +++NFH P+STLL+LVSAF +K+Y A+ H +RF SYGD+SLL
Sbjct: 354 DYKIVCAMVTNFHQPQSTLLLLVSAFV-KGNWRKIYDFALGHDFRFLSYGDSSLLIP 409
>gi|124002643|ref|ZP_01687495.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Microscilla
marina ATCC 23134]
gi|123991871|gb|EAY31258.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Microscilla
marina ATCC 23134]
Length = 415
Score = 337 bits (865), Expect = 1e-90, Method: Composition-based stats.
Identities = 136/414 (32%), Positives = 200/414 (48%), Gaps = 77/414 (18%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++++ LP RIA P+ RD ++L+V I DLP L ++ +VFN
Sbjct: 14 LTDYNYTLPEERIAKSPLMQRDQSKLLVYQSGN-----IQHQHFYDLPQHLPADTMLVFN 68
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------------WSVYARPSKVIK 110
NTKVI A+L + I L +P+ W +
Sbjct: 69 NTKVIPARLYFQKP-----TGALIEVFLLKPEAPHEIAAAMHTGNGCIWHCMIGNKRKWN 123
Query: 111 KGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKR 170
KG IL +G L+A + D + ++ S + +++ G +PLPPY+ RK
Sbjct: 124 KGLILEQVLPNGL-VLKAELTDSEKQW-VRFEWNNSHVSFAEVLAMTGELPLPPYLKRK- 180
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
+D YQT Y+K +G+VAAPTAGLHFT ++S+L GI+ F+TLHV AGTF PV
Sbjct: 181 -ATQKDADQYQTVYSKFEGAVAAPTAGLHFTPEVISQLQDKGIQTEFLTLHVSAGTFQPV 239
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT-------TED 283
KVE+ +H MHSE I Q + + G IV+VGTTS+R+LE+ E+
Sbjct: 240 KVENVIEHDMHSEQLVIHK---QNIEHLLHHSGNIVAVGTTSMRVLESVYWLGVRLLKEN 296
Query: 284 GIINPWS----------------------------------------GFTNIFITPGYRF 303
+ P + G T IFI P Y F
Sbjct: 297 YELLPGTPFQIDKLLPYQWENNDLPTRQEALQAILNYMNRQELGKLWGATEIFIFPRYEF 356
Query: 304 RAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ L++N+HLPK+TL++LV+AF G + +K+Y A++ YRF SYGD+SLL+
Sbjct: 357 KMCKGLITNYHLPKTTLILLVAAFVGND-WEKIYNEALAKDYRFLSYGDSSLLW 409
>gi|317179221|dbj|BAJ57009.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori F30]
Length = 345
Score = 337 bits (865), Expect = 1e-90, Method: Composition-based stats.
Identities = 123/365 (33%), Positives = 189/365 (51%), Gaps = 28/365 (7%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D+DLP IA P+ P++ A+L+V I+ + F N
Sbjct: 1 MKEFDLESYDYDLPKELIANYPILPKEKAKLLVYERRSQK---ITHTTFEHVLDFFPKNA 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+V N+TKVI A+L G + + + H N+ + IK D + F
Sbjct: 58 LVVLNDTKVIKARLFGSKHAFLPSKTT--EVFFHRFFKDNT--ALTQIKGKIKVEDKIFF 113
Query: 118 FSQDGQSRLEATVIDKWNTGEILL-----VFSISGIELERQISLVGTIPLPPYIARKRPI 172
+ A V++ + G+ L+ ++ + + + G +PLPPYI KR
Sbjct: 114 -----DAHYYAEVLELLHNGQRLIAFYNNKTPLNQANILKLLEQYGHMPLPPYI--KRAD 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
++ D +YQ+ +AK G+VAAPTA LHF+ N L +L+ K F+TLHVGAGTF+ V+
Sbjct: 167 ESLDTHEYQSVFAKHMGAVAAPTASLHFSQNTLEKLL-KDFKHAFLTLHVGAGTFLGVET 225
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+D DH +H+E+ I + + L + I+ VGTT+LR +E +
Sbjct: 226 KDIRDHQIHTEVLCIPKKSQEIL----QKSQEILCVGTTALRSVEYFKRLENPNQETF-E 280
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ V+ L++NFHLPKS+LLMLVSA G+E+TK++YQ AI YRFYSYGD
Sbjct: 281 CDIFLHLANPILHVNHLLTNFHLPKSSLLMLVSAMIGLEKTKEIYQIAIEKKYRFYSYGD 340
Query: 353 TSLLF 357
L+
Sbjct: 341 GMLIL 345
>gi|254884703|ref|ZP_05257413.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 4_3_47FAA]
gi|319642373|ref|ZP_07997027.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 3_1_40A]
gi|254837496|gb|EET17805.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 4_3_47FAA]
gi|317385988|gb|EFV66913.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 3_1_40A]
Length = 405
Score = 336 bits (863), Expect = 2e-90, Method: Composition-based stats.
Identities = 134/414 (32%), Positives = 198/414 (47%), Gaps = 73/414 (17%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ EF++ LP RIA P+ RD ++L+V +S+ + + LP +L S + ++F
Sbjct: 8 KISEFNYPLPDERIAKFPLATRDQSKLLVYRHG-----EVSEDIFTSLPHYLESGELMIF 62
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN------------SWSVYARPSKVI 109
NNTKVI A+L+ + I V PN SW K
Sbjct: 63 NNTKVIQARLHFRKE-----TGALIEVFCLEPVQPNDYVLNFQQTRQCSWLCMIGNLKKW 117
Query: 110 KKGDILHFFSQDG-QSRLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIA 167
K+G + + G Q L AT + T + + I + + G +P+PPY+
Sbjct: 118 KEGTLSRIVNVKGKQIVLSATRGECKGTSHWIDFSWDDDTITFADLLEVAGELPIPPYLN 177
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R+ D YQT Y+KI+GSVAAPTAGLHFT +L+ L GI +TLHVGAGTF
Sbjct: 178 RE--TQESDKETYQTVYSKIKGSVAAPTAGLHFTERVLAALDERGIDREELTLHVGAGTF 235
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK E+ + H MH+E + T + + + G ++VGTTS+R LE+
Sbjct: 236 KPVKSEEIEGHEMHTEYISVSKHT---IEKLIAHNGEAIAVGTTSVRTLESLYYIGVLIS 292
Query: 279 ----ATTEDGIINPWSGF------------------------------TNIFITPGYRFR 304
AT ++ + W + T I I PGY ++
Sbjct: 293 HNPDATQDELHVQQWMPYEDKNDLTPVEALQQILDYLNRHEMEALHSSTQIIIAPGYTYK 352
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
V +++NFH P+STLL+LVSAF +++Y +A+ H +RF SYGD+SLL
Sbjct: 353 IVKKMVTNFHQPQSTLLLLVSAFV-KGNWRRIYDYALGHDFRFLSYGDSSLLIP 405
>gi|293418471|ref|ZP_06660906.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli B088]
gi|291324999|gb|EFE64414.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli B088]
Length = 286
Score = 336 bits (863), Expect = 2e-90, Method: Composition-based stats.
Identities = 111/301 (36%), Positives = 162/301 (53%), Gaps = 17/301 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SINATMTARH--GALFEVEFNDERSVLDILNSIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL +L + G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFIT 298
HSE + A+ + K+RG R+++VGTTS+R LE+A ++ +I P+ T IFI
Sbjct: 226 HSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIY 285
Query: 299 P 299
P
Sbjct: 286 P 286
>gi|29349381|ref|NP_812884.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
thetaiotaomicron VPI-5482]
gi|298384910|ref|ZP_06994469.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 1_1_14]
gi|29341290|gb|AAO79078.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
thetaiotaomicron VPI-5482]
gi|298262054|gb|EFI04919.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 1_1_14]
Length = 406
Score = 336 bits (863), Expect = 2e-90, Method: Composition-based stats.
Identities = 130/422 (30%), Positives = 194/422 (45%), Gaps = 89/422 (21%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ E+++ LP RIA P+ RD ++L+V +S+ + + LP +L +VF
Sbjct: 9 HISEYNYPLPDERIAKFPLAVRDQSKLLVYRHG-----EVSEDVFTSLPDYLPKGSLMVF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------------WSVYARPSKVI 109
NNTKVI A+L+ + I + PN W K
Sbjct: 64 NNTKVIQARLHFRKE-----TGALIEVFCLEPIQPNDYVLNFQQTEHAAWLCMIGNLKKW 118
Query: 110 KKGDI----------LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGT 159
K G + + + G+ R + ID + + + + G
Sbjct: 119 KDGALKREMTVKGFPITLTATRGECRGTSHWID--------FSWDNPEVTFADILEVFGE 170
Query: 160 IPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVT 219
+P+PPY+ R + D YQT Y+KI+GSVAAPTAGLHFT +L L GI + +T
Sbjct: 171 LPIPPYLNRD--TEESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLEALQEKGIDLEELT 228
Query: 220 LHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET- 278
LHVGAGTF PVK E+ + H MH+E ++ T + + G V+VGTTS+R LE+
Sbjct: 229 LHVGAGTFKPVKSEEIEGHEMHTEYISVNRAT---IKKLIDHDGCAVAVGTTSVRTLESL 285
Query: 279 ------------ATTEDGIINPWSGF------------------------------TNIF 296
AT E+ + W + T I
Sbjct: 286 YHIGVTLAENPDATEEELHVKQWQPYEKYDQIPPVVALQKILGYLDRNGLEALHSSTQII 345
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+++ V +++NFH P+STLL+LVSAF + +Y +A++H +RF SYGD+SLL
Sbjct: 346 IAPGYQYKIVKAMVTNFHQPQSTLLLLVSAFV-KGNWRTIYDYALAHDFRFLSYGDSSLL 404
Query: 357 FQ 358
Sbjct: 405 IP 406
>gi|260171863|ref|ZP_05758275.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. D2]
Length = 417
Score = 336 bits (863), Expect = 3e-90, Method: Composition-based stats.
Identities = 125/422 (29%), Positives = 195/422 (46%), Gaps = 89/422 (21%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ E+++ LP RIA P+ RD ++L++ +S+ + + LP +L ++F
Sbjct: 20 RISEYNYPLPDERIAKFPLPTRDQSKLLIYRRG-----EVSEDIFTSLPEYLPQGSLMIF 74
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------------WSVYARPSKVI 109
NNTKVI A+L+ + I + PN W K
Sbjct: 75 NNTKVIQARLHFRKE-----TGALIEVFCLEPIQPNDYALNFQQTEHAAWLCMIGNLKKW 129
Query: 110 KKGDI----------LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGT 159
K G++ + + G+ + + +D + + + + G
Sbjct: 130 KDGELKREMTVKGFPITLTAVRGECKGTSHWVD--------FSWDNPEVTFADILEVFGE 181
Query: 160 IPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVT 219
+P+PPY+ R + D YQT Y+KI+GSVAAPTAGLHFT +L L GI + +T
Sbjct: 182 LPIPPYLNRD--TEESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALQEKGIDLEELT 239
Query: 220 LHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET- 278
LHVGAGTF PVK E+ + H MH+E ++ T + + G ++VGTTS+R LE+
Sbjct: 240 LHVGAGTFKPVKSEEIEGHEMHTEYISVNRST---IKKLIDHDGCAIAVGTTSVRTLESL 296
Query: 279 ------------ATTEDGIINPWSGF------------------------------TNIF 296
AT E+ + W + T I
Sbjct: 297 YHIGVILADHPDATEEELHVKQWQPYEKYDQIPPVVALQKILGYLDRNGLEALHTSTQII 356
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+++ V +++NFH P+STLL+LVSAF + +Y +A++H +RF SYGD+SLL
Sbjct: 357 IAPGYQYKIVKAMVTNFHQPQSTLLLLVSAFV-KGNWRAIYDYALAHDFRFLSYGDSSLL 415
Query: 357 FQ 358
Sbjct: 416 MP 417
>gi|325300339|ref|YP_004260256.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
salanitronis DSM 18170]
gi|324319892|gb|ADY37783.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
salanitronis DSM 18170]
Length = 406
Score = 336 bits (862), Expect = 3e-90, Method: Composition-based stats.
Identities = 127/423 (30%), Positives = 198/423 (46%), Gaps = 89/423 (21%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +++++LP RIA P+ RD ++L+V IS+ + LP ++ ++F
Sbjct: 8 HISDYNYNLPDERIAKFPLPVRDQSKLLVYR-----NGDISETRFTSLPDYVEPGTLMIF 62
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------------WSVYARPSKVI 109
NNTKVI A+L+ + I + PN W K
Sbjct: 63 NNTKVIQARLHFRKE-----TGALIEIFCLEPIQPNDYALNFQQTEHAAWLCMIGNLKKW 117
Query: 110 KKGDI----------LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGT 159
K+G + + + G++R + +D + G+ + + G
Sbjct: 118 KEGTLTRRMTVKGQDITLAATRGEARGTSHWVD--------FTWDNPGVTFADILEMFGE 169
Query: 160 IPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVT 219
+P+PPY+ R+ D YQT Y+KI+GSVAAPTAGLHFT +L L + G + VT
Sbjct: 170 LPIPPYLNRE--TQESDKETYQTVYSKIKGSVAAPTAGLHFTQRVLDALRAKGADLEEVT 227
Query: 220 LHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET- 278
LHVGAGTF PVK E+ + H MH+E + + + + + G+ ++VGTTS+R LE+
Sbjct: 228 LHVGAGTFKPVKSEEIEGHEMHTEYISVSKGS---IEKLIAHEGKALAVGTTSVRTLESL 284
Query: 279 ------------ATTEDGIINPWSGF------------------------------TNIF 296
A D + W + T I
Sbjct: 285 YYIGVTLSQHPDAQEADLHVRQWQPYETHPTLSTTEALKHILHYMERHRLDALHTSTQII 344
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY ++ V +++NFH P+STLL+LVSAF + K++Y +A+SH +RF SYGD+SLL
Sbjct: 345 IAPGYEYKVVKRMITNFHQPQSTLLLLVSAFVKGD-WKRIYDYALSHDFRFLSYGDSSLL 403
Query: 357 FQK 359
+
Sbjct: 404 INE 406
>gi|291276348|ref|YP_003516120.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter mustelae 12198]
gi|290963542|emb|CBG39374.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter mustelae 12198]
Length = 342
Score = 336 bits (861), Expect = 4e-90, Method: Composition-based stats.
Identities = 115/365 (31%), Positives = 179/365 (49%), Gaps = 31/365 (8%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSND 57
M ++ +D+ LP IA P+ ++ ARL+V I+ L F+ +
Sbjct: 1 MREFSLQSYDYALPQELIAKYPLERKEDARLLVYDRKSGG---ITHTHFDALFDFIPRDF 57
Query: 58 AIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+VFN+TKVI A++ G + +I H + + +K G+ +HF
Sbjct: 58 TLVFNDTKVIKARIFGEK-----GSGGKIELLYHKSLPDG---ALVQIRGRVKVGEHIHF 109
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGI---ELERQISLVGTIPLPPYIARKRPIDA 174
A V + G ++ F G +L +G IPLPPY+ KR ++
Sbjct: 110 PHG-----YSAKVCALLDHGMRIVEFLYHGRPIRDLAPLFESIGHIPLPPYL--KRADES 162
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D +YQ+ +A G++AAPTA LHF+ + FVTLHVGAGTF+ V+ ED
Sbjct: 163 ADEQEYQSVFATHHGAIAAPTASLHFSPRMRD-FALQHYPHAFVTLHVGAGTFLGVESED 221
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWS--GF 292
H +HSE ++ A + K +I+ +GTT+LR +E + D + G
Sbjct: 222 IRGHEIHSEELWVSAANLSLIEGAK----KILCIGTTALRSVEFLSQRDLLRQEGDYVGD 277
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ G + L++NFHLPKS+L+MLV++ G++ K +Y AI+ YRFYSYGD
Sbjct: 278 CDIFLHCGNPPKKASALLTNFHLPKSSLIMLVASMVGLDTCKNLYAEAIAKKYRFYSYGD 337
Query: 353 TSLLF 357
L+
Sbjct: 338 GMLIL 342
>gi|315920175|ref|ZP_07916415.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. D2]
gi|313694050|gb|EFS30885.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. D2]
Length = 406
Score = 335 bits (860), Expect = 5e-90, Method: Composition-based stats.
Identities = 125/422 (29%), Positives = 195/422 (46%), Gaps = 89/422 (21%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ E+++ LP RIA P+ RD ++L++ +S+ + + LP +L ++F
Sbjct: 9 RISEYNYPLPDERIAKFPLPTRDQSKLLIYRRG-----EVSEDIFTSLPEYLPQGSLMIF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------------WSVYARPSKVI 109
NNTKVI A+L+ + I + PN W K
Sbjct: 64 NNTKVIQARLHFRKE-----TGALIEVFCLEPIQPNDYALNFQQTEHAAWLCMIGNLKKW 118
Query: 110 KKGDI----------LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGT 159
K G++ + + G+ + + +D + + + + G
Sbjct: 119 KDGELKREMTVKGFPITLTAVRGECKGTSHWVD--------FSWDNPEVTFADILEVFGE 170
Query: 160 IPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVT 219
+P+PPY+ R + D YQT Y+KI+GSVAAPTAGLHFT +L L GI + +T
Sbjct: 171 LPIPPYLNRD--TEESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALQEKGIDLEELT 228
Query: 220 LHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET- 278
LHVGAGTF PVK E+ + H MH+E ++ T + + G ++VGTTS+R LE+
Sbjct: 229 LHVGAGTFKPVKSEEIEGHEMHTEYISVNRST---IKKLIDHDGCAIAVGTTSVRTLESL 285
Query: 279 ------------ATTEDGIINPWSGF------------------------------TNIF 296
AT E+ + W + T I
Sbjct: 286 YHIGVILADHPDATEEELHVKQWQPYEKYDQIPPVVALQKILGYLDRNGLEALHTSTQII 345
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+++ V +++NFH P+STLL+LVSAF + +Y +A++H +RF SYGD+SLL
Sbjct: 346 IAPGYQYKIVKAMVTNFHQPQSTLLLLVSAFV-KGNWRAIYDYALAHDFRFLSYGDSSLL 404
Query: 357 FQ 358
Sbjct: 405 MP 406
>gi|150002930|ref|YP_001297674.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
vulgatus ATCC 8482]
gi|149931354|gb|ABR38052.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
vulgatus ATCC 8482]
Length = 405
Score = 335 bits (860), Expect = 6e-90, Method: Composition-based stats.
Identities = 134/414 (32%), Positives = 198/414 (47%), Gaps = 73/414 (17%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ EF++ LP RIA P+ RD ++L+V +S+ + + LP +L S + ++F
Sbjct: 8 KISEFNYPLPDERIAKFPLATRDQSKLLVYRHG-----EVSEDIFTSLPHYLESGELMIF 62
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN------------SWSVYARPSKVI 109
NNTKVI A+L+ + I V PN SW K
Sbjct: 63 NNTKVIQARLHFRKE-----TGALIEVFCLEPVQPNDYVLNFQQTRQCSWLCMIGNLKKW 117
Query: 110 KKGDILHFFSQDG-QSRLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIA 167
K+G + + G Q L AT + T + + I + + G +P+PPY+
Sbjct: 118 KEGTLSRIVNVKGKQIVLSATRGECKGTSHWIDFSWDDDTITFADLLEVAGELPIPPYLN 177
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R+ D YQT Y+KI+GSVAAPTAGLHFT +L+ L GI +TLHVGAGTF
Sbjct: 178 RE--TQESDKETYQTVYSKIKGSVAAPTAGLHFTERVLAALDERGIDREELTLHVGAGTF 235
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK E+ + H MH+E + T + + + G ++VGTTS+R LE+
Sbjct: 236 KPVKSEEIEGHEMHTEYISVSKHT---IEKLIAHHGEAIAVGTTSVRTLESLYYIGVLIS 292
Query: 279 ----ATTEDGIINPWSGF------------------------------TNIFITPGYRFR 304
AT ++ + W + T I I PGY ++
Sbjct: 293 HNPDATQDELHVQQWMPYEDKNDLTPVEALQQILDYLNRHEMEALHSSTQIIIAPGYTYK 352
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
V +++NFH P+STLL+LVSAF +++Y +A+ H +RF SYGD+SLL
Sbjct: 353 IVKKMVTNFHQPQSTLLLLVSAFV-KGNWRRIYDYALGHDFRFLSYGDSSLLIP 405
>gi|34557262|ref|NP_907077.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Wolinella
succinogenes DSM 1740]
gi|34482978|emb|CAE09977.1| RIBOSYLTRANSFERASE-ISOMERASE [Wolinella succinogenes]
Length = 343
Score = 334 bits (858), Expect = 9e-90, Method: Composition-based stats.
Identities = 119/369 (32%), Positives = 179/369 (48%), Gaps = 38/369 (10%)
Query: 1 MMVKE------FDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLN 54
M + +D++LP IA P+ P++ ARL+V + I S+ F+
Sbjct: 1 MKSNDPFSLLTYDYELPEELIASHPIHPKNQARLLVYNRKDGS---ILHTHFSEFERFIP 57
Query: 55 SNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
IVFN+TKVI A+ G + + H + + + + +K G
Sbjct: 58 QEALIVFNDTKVIKARFFGKKESGGG-----VELLYHKPLGVERF--WVQIKGRVKLGQT 110
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILL-VFSISGIELERQ-----ISLVGTIPLPPYIAR 168
L A ++ G + + G+++E + G +PLPPYI
Sbjct: 111 LLLAEG-----WRAQILALGEGGFREVSFWDERGVKVELAQLLLFLERQGHVPLPPYI-- 163
Query: 169 KRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFM 228
KR A D V+YQ+ +AK +G++AAPTA LHF + RL FVTLHVGAGTF+
Sbjct: 164 KRTDTALDEVEYQSVFAKHEGAIAAPTASLHFEETDMVRLKER-FDHAFVTLHVGAGTFL 222
Query: 229 PVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINP 288
V+ ED +H MH E FI +AQ + +I+++GTT+ R +E
Sbjct: 223 GVESEDIRNHSMHKERYFISESSAQKIKQA----SQILAIGTTAARTIEYYVRTSKK--- 275
Query: 289 WSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
G ++F+ PG L++NFHLP+STLLMLVSAF +E +++Y A+ YRF+
Sbjct: 276 -EGECDLFLHPGNPPLKTTALLTNFHLPQSTLLMLVSAFITPKECQRVYAQALKERYRFF 334
Query: 349 SYGDTSLLF 357
SYGD L+
Sbjct: 335 SYGDGMLIL 343
>gi|188994845|ref|YP_001929097.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas gingivalis ATCC 33277]
gi|188594525|dbj|BAG33500.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas gingivalis ATCC 33277]
Length = 405
Score = 334 bits (858), Expect = 1e-89, Method: Composition-based stats.
Identities = 144/413 (34%), Positives = 189/413 (45%), Gaps = 73/413 (17%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+ LP RIA + RD+ +L+V I D + S L L S +V N
Sbjct: 9 IADYDYPLPEERIAKHALPQRDACKLLVYDKG-----EIKDAVFSRLSEVLPSGSMLVRN 63
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------------WSVYARPSKVIK 110
NT+VI A+L + I VSP W +K +
Sbjct: 64 NTRVIRARLLFHK-----STGATIEVFCLEPVSPAQYELSLTARGSCVWHCMVGNAKRWR 118
Query: 111 KGD-ILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARK 169
GD + S G S L D G I + + + G +P+PPY+ R
Sbjct: 119 SGDLQMEIPSPQGGSILLTASHDPAADGCIRFSWENDHYTFGEILEMAGILPIPPYLNRD 178
Query: 170 RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
+ D YQT YAK QGSVAAPTAGLHFT RL + G V VTLHVGAGTF P
Sbjct: 179 --TEEEDLETYQTVYAKNQGSVAAPTAGLHFTEEEFERLRAQGTPVIDVTLHVGAGTFRP 236
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET----------- 278
VK E +H MH E+ I+ + +AL + GRIV+VGTTS+R LE+
Sbjct: 237 VKSETIGEHRMHRELIVIERSSLEAL---RDWQGRIVAVGTTSVRTLESLYWLGRSLSTA 293
Query: 279 --ATTEDGIINPWSGF-------------------------------TNIFITPGYRFRA 305
+ E +N W + T I I PGYR+R
Sbjct: 294 SHTSQESLKVNQWEAYENEDAALSRSEAIRIILAWMDEQGVETLIFPTKILIAPGYRYRM 353
Query: 306 VDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
VD +++NFH P+STLL+LVSAF G + K +Y HA+ YRF SYGD SLL
Sbjct: 354 VDAMITNFHQPRSTLLLLVSAFIGED-WKAVYHHALESGYRFLSYGDGSLLIP 405
>gi|153807380|ref|ZP_01960048.1| hypothetical protein BACCAC_01658 [Bacteroides caccae ATCC 43185]
gi|149129742|gb|EDM20954.1| hypothetical protein BACCAC_01658 [Bacteroides caccae ATCC 43185]
Length = 406
Score = 334 bits (856), Expect = 1e-89, Method: Composition-based stats.
Identities = 128/414 (30%), Positives = 195/414 (47%), Gaps = 73/414 (17%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ E+++ LP RIA P+ RD ++L+V +++ + + LP +L ++F
Sbjct: 9 HISEYNYPLPDERIAKFPLPVRDQSKLLVYRHG-----EVTEDIFTSLPEYLPKGSLMIF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------------WSVYARPSKVI 109
NNTKVI A+L+ + I + PN W K
Sbjct: 64 NNTKVIQARLHFRKE-----TGALIEVFCLEPIQPNDYVLNFQQTEHAAWLCMIGNLKKW 118
Query: 110 KKGDILHFFSQDG-QSRLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIA 167
K G + + G L AT + T + ++ + + + G +P+PPY+
Sbjct: 119 KDGTLKREMTVKGFPITLTATRGECKGTSHWVDFAWNNPEVTFADILEVFGELPIPPYLN 178
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R + D YQT Y+KI+GSVAAPTAGLHFT +L L GI + +TLHVGAGTF
Sbjct: 179 RN--TEESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLEALQEKGIDLEELTLHVGAGTF 236
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK E+ + H MH+E ++ T + + G ++VGTTS+R LE+
Sbjct: 237 KPVKSEEIEGHEMHTEYISVNRNT---IKKLIDHDGCAIAVGTTSVRTLESLYHIGVTLA 293
Query: 279 ----ATTEDGIINPWSGF------------------------------TNIFITPGYRFR 304
AT ++ + W + T I I PGY+++
Sbjct: 294 DHPDATEQELHVRQWQPYEKYDQIPPVVSLQKILGYLDRNGLEALHTSTQIIIAPGYQYK 353
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
V +++NFH P+STLL+LVSAF + +Y +A+SH +RF SYGD+SLL
Sbjct: 354 IVKAMVTNFHQPQSTLLLLVSAFV-KGNWRTIYDYALSHDFRFLSYGDSSLLIP 406
>gi|124516476|gb|EAY57984.1| putative queuosine biosynthesis protein [Leptospirillum rubarum]
Length = 385
Score = 334 bits (856), Expect = 2e-89, Method: Composition-based stats.
Identities = 119/358 (33%), Positives = 174/358 (48%), Gaps = 20/358 (5%)
Query: 4 KEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNN 63
E+D+DLP RI L P R +RL+VV + P + S FL D +V N+
Sbjct: 39 DEYDYDLPEDRIRLFPPKNRGESRLLVVGRDSGGPYFGTMEEFS---RFLFPGDLLVLND 95
Query: 64 TKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQ 123
++V+ A++ ++I P+ K I L G
Sbjct: 96 SRVLPARVFIR-----APTGRKIELLFLNPQDPSPVRFL---GKGIGSSSTLSL---PGG 144
Query: 124 SRLEATVIDKWNTGEILLVFSISGIE-LERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
R+ ++ E G E L + G +PLPPYI + R D YQT
Sbjct: 145 GRVR---DIRYLPEEGCFQGVYEGEETLLSWLESHGEMPLPPYIRKARDHHPSDRERYQT 201
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
+++ GSVAAPTAGLHFT LL L G++ VTLHVG GTF P+ H+MH+
Sbjct: 202 VFSRHAGSVAAPTAGLHFTEALLEHLKDKGVETATVTLHVGIGTFRPLGPGGVGQHVMHA 261
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E + T Q + + RG R+ +VGTT +R LET + + + +T +FI PG+
Sbjct: 262 ERFLVPDETVQKIEDARRRGSRVFAVGTTVMRTLET-WGQHPVRDAVPAWTRLFIRPGFP 320
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAF-CGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
FR VD L++NFH P+STL++LV +F G + +Y+ A+ + F SYGD L+ +
Sbjct: 321 FRVVDGLLTNFHQPRSTLVVLVDSFLGGNGRWRSLYRQALEEGFMFLSYGDAMLIVPE 378
>gi|34540718|ref|NP_905197.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas gingivalis W83]
gi|34397032|gb|AAQ66096.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase, putative
[Porphyromonas gingivalis W83]
Length = 405
Score = 334 bits (856), Expect = 2e-89, Method: Composition-based stats.
Identities = 143/413 (34%), Positives = 188/413 (45%), Gaps = 73/413 (17%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+ LP RIA + RD+ +L+V I D + S L L S +V N
Sbjct: 9 IADYDYPLPEERIAKHALPQRDACKLLVYDKG-----EIKDAVFSQLSEVLPSGSMLVRN 63
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSP------------NSWSVYARPSKVIK 110
NT+VI A+L + I VSP +W +K +
Sbjct: 64 NTRVIRARLLFRK-----STGATIEVFCLEPVSPAQYELSLTARGSCTWHCMVGNAKRWR 118
Query: 111 KGD-ILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARK 169
D + S G S L D G I L + + + G +P+PPY+ R
Sbjct: 119 SDDLQMEIPSPQGGSILLTASHDPAADGCIRLSWENDHYTFGEILEMAGILPIPPYLNRD 178
Query: 170 RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
+ D YQT YAK GSVAAPTAGLHFT RL + G V VTLHVGAGTF P
Sbjct: 179 --TEEEDLETYQTVYAKNLGSVAAPTAGLHFTEEEFERLRAQGTPVVDVTLHVGAGTFRP 236
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET----------- 278
VK E +H MH E+ I+ + +AL + G IV+VGTTS+R LE+
Sbjct: 237 VKSETIGEHRMHRELIVIERSSLEAL---RDWQGSIVAVGTTSVRTLESLYWLGRSLSSA 293
Query: 279 --ATTEDGIINPWSGF-------------------------------TNIFITPGYRFRA 305
+ E +N W + T I I PGYR+R
Sbjct: 294 SHTSQESLKVNQWEAYENEDVALSRSETIRIILDWMDEQGVETLIFPTEILIAPGYRYRM 353
Query: 306 VDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
VD +++NFH P+STLL+LVSAF G E K +Y HA+ YRF SYGD SLL
Sbjct: 354 VDAMITNFHQPRSTLLLLVSAFIG-ENWKAVYHHALESGYRFLSYGDGSLLIP 405
>gi|189219693|ref|YP_001940334.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Methylacidiphilum infernorum V4]
gi|189186551|gb|ACD83736.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Methylacidiphilum infernorum V4]
Length = 337
Score = 333 bits (855), Expect = 2e-89, Method: Composition-based stats.
Identities = 129/363 (35%), Positives = 184/363 (50%), Gaps = 37/363 (10%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ + FDLP IAL P+ RD +LMVV H +L FL+ D +V N
Sbjct: 4 IDHYSFDLPSELIALDPLPSRDGCKLMVVDRKTQ---RFYHHRFYELALFLSKEDLLVLN 60
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF--FSQ 120
N+KVI A +++ + + P W V A P K +K G I+ +Q
Sbjct: 61 NSKVIPAFFQS--------ADEKTTFLFVQSLDPLHWKVMASPGKHLKMGSIIPIKCPTQ 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKR------PIDA 174
+ S + A + K + +L F E ++ +G PLPPYI + R I+
Sbjct: 113 NPNSPITARLSSKLQSAYYVLEFDE-----EPKLEWLGLPPLPPYIRKLRKKKNRVEIEQ 167
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
+D YQT +A+ GS+AAPTAGLHF+ +L + F+TLHVG GTF P+ E
Sbjct: 168 KDREYYQTVFAQHPGSIAAPTAGLHFSKEMLEQ-----FSTAFITLHVGPGTFRPLSTEQ 222
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
+ +E ID+ L G RIV+VGTT +R+LET + P G+T+
Sbjct: 223 LATGRLEAEYYSIDSS----LKEKYKPGRRIVAVGTTVVRVLETIKN----LEPQQGWTD 274
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
+FI P + F+ + L++NFHLP+S+L +L AF G E KK Y AI +YRFYSYGD
Sbjct: 275 LFIFPPFTFKRTNALITNFHLPRSSLFLLTCAFAGTELLKKAYAEAIQKSYRFYSYGDAM 334
Query: 355 LLF 357
L+
Sbjct: 335 LII 337
>gi|110639383|ref|YP_679592.1| S-adenosylmethionine/tRNA ribosyltransferase-isomerase [Cytophaga
hutchinsonii ATCC 33406]
gi|110282064|gb|ABG60250.1| S-adenosylmethionine/tRNA ribosyltransferase-isomerase [Cytophaga
hutchinsonii ATCC 33406]
Length = 413
Score = 333 bits (854), Expect = 2e-89, Method: Composition-based stats.
Identities = 137/416 (32%), Positives = 197/416 (47%), Gaps = 73/416 (17%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +++DLP RIA P+ RD ++L+V ISD S + L N +VF
Sbjct: 7 NIETYNYDLPVERIAEYPLAERDQSKLLVY-----KDDHISDKTFSSIVDELPRNTLLVF 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS-------------WSVYARPSKV 108
NNT+V+ A+ F + + W + +K
Sbjct: 62 NNTRVVQAR-----FLFQTPTGATVEIFSLEPAEGHGGPAESMSARGKVIWKCFVGNAKR 116
Query: 109 IKKGDILHFFSQDGQSRLE--ATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPY 165
K+ +++ + S L A I++ ++ +++ I SL+G +PLPPY
Sbjct: 117 WKQPELIREVQLENGSMLSFHARQIEQKADYYLIGFSWNLEDITFSEIFSLLGDLPLPPY 176
Query: 166 IARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAG 225
+ RK +A D YQT YAK +GSVAAPTAGLHFT ++ RL GI+ VTLHVGAG
Sbjct: 177 MKRK--TEASDKERYQTVYAKHEGSVAAPTAGLHFTDAIMQRLAEKGIQKQEVTLHVGAG 234
Query: 226 TFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET------- 278
TF PVK + +H MHSE ++ T + L + ++ VGTTS+R LE+
Sbjct: 235 TFKPVKTDSIKEHTMHSEYIHVNRATVELLKNA--DNLQVTPVGTTSMRTLESLYWLGCK 292
Query: 279 ----ATTEDGII--------------------------------NPWSGFTNIFITPGYR 302
A ++ N S T + I PGY
Sbjct: 293 LCSKAALTGKLLELTQWDAYELPALSLREAMEELLKYINTSSDKNALSAKTALLIKPGYE 352
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
F+ D +++NFH PKSTLL LVSAF GIE K+Y A+ + YRF SYGD+SLLF+
Sbjct: 353 FKVCDAIITNFHQPKSTLLCLVSAFIGIESMNKVYHFALENDYRFLSYGDSSLLFK 408
>gi|282895700|ref|ZP_06303825.1| Queuosine biosynthesis protein [Raphidiopsis brookii D9]
gi|281199394|gb|EFA74259.1| Queuosine biosynthesis protein [Raphidiopsis brookii D9]
Length = 316
Score = 332 bits (853), Expect = 3e-89, Method: Composition-based stats.
Identities = 119/302 (39%), Positives = 163/302 (53%), Gaps = 18/302 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +D++LPP IA PV PRD++RLMV++P DH+ DLP L D +V N
Sbjct: 10 LSGYDYELPPELIAQNPVVPRDNSRLMVINPPAGTLTPPLDHIFRDLPELLKPGDLLVMN 69
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
NT+VI A+L G + + L N W +P K G + F Q
Sbjct: 70 NTRVIPARLYGRK-----STGARVEVLLLEEKQHNCWLALVKPGKYFNIGTEIIFDDQGL 124
Query: 123 QS------RLEATVIDKWN-TGEILLVFSIS-GIELERQISLVGTIPLPPYIARKRPIDA 174
S +L ATVI++ TG LL F + + L + +G IPLPPYI ++
Sbjct: 125 SSVNKLIPQLTATVIERDENTGGRLLRFDLPINVSLLHFLHKLGKIPLPPYINNSHALEE 184
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
+ YQT YAK G+VAAPTAGLHFT LL +L GI+ F+TLHVG GTF PV+VED
Sbjct: 185 Q----YQTVYAKHDGAVAAPTAGLHFTPELLVKLRESGIQQEFLTLHVGVGTFRPVEVED 240
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
H MH E + + + + K+ GGRI++VGTT +R LE A + G + P++G N
Sbjct: 241 VTTHQMHEEWIEVSGDLVEKIYATKNAGGRIIAVGTTVVRALEGAA-QSGSLQPYTGKVN 299
Query: 295 IF 296
+F
Sbjct: 300 LF 301
>gi|87125598|ref|ZP_01081443.1| Queuosine biosynthesis protein [Synechococcus sp. RS9917]
gi|86166898|gb|EAQ68160.1| Queuosine biosynthesis protein [Synechococcus sp. RS9917]
Length = 373
Score = 332 bits (853), Expect = 3e-89, Method: Composition-based stats.
Identities = 130/359 (36%), Positives = 182/359 (50%), Gaps = 12/359 (3%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D+ LP RIA PV PR +ARL++V P + V D L D +V
Sbjct: 8 LLSSYDYQLPEERIAQAPVEPRHAARLLMVPPVDAPVEEARHRQVWDWQNALQPKDLLVV 67
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+T ++ R + W A+P K + GD + +Q
Sbjct: 68 NDT-----RVLRARLRVRRSGGGMAELLVLEPRGEGQWLCLAKPGKKLNPGDQVWLEAQV 122
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIE---LERQISLVGTIPLPPYIARKRPIDARDYV 178
+ + +G ++ F + +E + G +PLPPYI R DA D
Sbjct: 123 QEPLPLQVLASDAASGGRIVQFPPGCEDAIAIEALLERYGEVPLPPYIDRH---DASDQE 179
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT YA G+VAAPTAGLH + LL L GI + VTLHVG GTF PV+ ED +
Sbjct: 180 RYQTRYAARPGAVAAPTAGLHLSDELLEALRGRGIALATVTLHVGLGTFRPVETEDLSEL 239
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI-INPWSGFTNIFI 297
+HSE + +A+ + ++RGGR+++VGTTS+R LE A G + P ++ I
Sbjct: 240 SLHSEWVEVSPALVEAVAACRARGGRVIAVGTTSVRALEGAAAAGGGSLIPIRQPVDLVI 299
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
PGYRF V L++NFHLPKS+LL+LVSA G E ++Y AI YRFYSYGD +
Sbjct: 300 QPGYRFAVVQGLLTNFHLPKSSLLLLVSALIGRERLLQLYDAAIEQRYRFYSYGDAMWI 358
>gi|237719212|ref|ZP_04549693.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 2_2_4]
gi|229451591|gb|EEO57382.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 2_2_4]
Length = 406
Score = 332 bits (853), Expect = 4e-89, Method: Composition-based stats.
Identities = 128/414 (30%), Positives = 192/414 (46%), Gaps = 73/414 (17%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ E+ + LP RIA P+ RD ++L++ +S+ + + LP +L ++F
Sbjct: 9 HISEYSYPLPDERIAKFPLPTRDQSKLLIYRRG-----EVSEDVFTSLPEYLPQGSLMIF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------------WSVYARPSKVI 109
NNTKVI A+L+ + I + PN W K
Sbjct: 64 NNTKVIQARLHFRKE-----TGALIEVFCLEPIQPNDYVLNFQQTVHAAWLCMIGNLKKW 118
Query: 110 KKGDILHFFSQDG-QSRLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIA 167
K G + + G L AT + T + + + + + G +P+PPY+
Sbjct: 119 KDGQLKREMTVKGFPITLTATRGECKGTSHWVDFAWDNPEVTFADILEVFGELPIPPYLN 178
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R + D YQT Y+KI+GSVAAPTAGLHFT +L L GI + +TLHVGAGTF
Sbjct: 179 RD--TEESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALQEKGIDLEELTLHVGAGTF 236
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK E+ + H MH+E ++ T + + G ++VGTTS+R LE+
Sbjct: 237 KPVKSEEIEGHEMHTEYISVNRST---IKKLIDHDGCAIAVGTTSVRTLESLYHIGVTLA 293
Query: 279 ----ATTEDGIINPWSGF------------------------------TNIFITPGYRFR 304
AT E+ + W + T I I PGY ++
Sbjct: 294 ENPYATEEELRVKQWQPYEKYDQIPPVVALQKILGYLDRNGLETLHTSTQIIIAPGYNYK 353
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
V +++NFH P+STLL+LVSAF + +Y +A++H +RF SYGD+SLL
Sbjct: 354 IVKAMVTNFHQPQSTLLLLVSAFV-KGNWRTIYDYALAHDFRFLSYGDSSLLIP 406
>gi|253570272|ref|ZP_04847681.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 1_1_6]
gi|251840653|gb|EES68735.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 1_1_6]
Length = 406
Score = 332 bits (852), Expect = 4e-89, Method: Composition-based stats.
Identities = 129/422 (30%), Positives = 193/422 (45%), Gaps = 89/422 (21%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ E+++ L RIA P+ RD ++L+V +S+ + + LP +L +VF
Sbjct: 9 HISEYNYPLSDERIAKFPLAVRDQSKLLVYRHG-----EVSEDVFTSLPDYLPKGSLMVF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------------WSVYARPSKVI 109
NNTKVI A+L+ + I + PN W K
Sbjct: 64 NNTKVIQARLHFRKE-----TGALIEVFCLEPIQPNDYVLNFQQTEHAAWLCMIGNLKKW 118
Query: 110 KKGDI----------LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGT 159
K G + + + G+ R + ID + + + + G
Sbjct: 119 KDGALKREMTVKGFPITLTATRGECRGTSHWID--------FSWDNPEVTFADILEVFGE 170
Query: 160 IPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVT 219
+P+PPY+ R + D YQT Y+KI+GSVAAPTAGLHFT +L L GI + +T
Sbjct: 171 LPIPPYLNRD--TEESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLEALQEKGIDLEELT 228
Query: 220 LHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET- 278
LHVGAGTF PVK E+ + H MH+E ++ T + + G V+VGTTS+R LE+
Sbjct: 229 LHVGAGTFKPVKSEEIEGHEMHTEYISVNRAT---IKKLIDHDGCAVAVGTTSVRTLESL 285
Query: 279 ------------ATTEDGIINPWSGF------------------------------TNIF 296
AT E+ + W + T I
Sbjct: 286 YHIGVTLAENPDATEEELHVKQWQPYEKYDQIPPVVALQKILGYLDRNGLEALHSSTQII 345
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY+++ V +++NFH P+STLL+LVSAF + +Y +A++H +RF SYGD+SLL
Sbjct: 346 IAPGYQYKIVKAMVTNFHQPQSTLLLLVSAFV-KGNWRTIYDYALAHDFRFLSYGDSSLL 404
Query: 357 FQ 358
Sbjct: 405 IP 406
>gi|255690464|ref|ZP_05414139.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides finegoldii DSM 17565]
gi|260623913|gb|EEX46784.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides finegoldii DSM 17565]
Length = 406
Score = 332 bits (852), Expect = 5e-89, Method: Composition-based stats.
Identities = 127/422 (30%), Positives = 197/422 (46%), Gaps = 89/422 (21%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ E+++ LP RIA P+ RD ++L++ +++ + + LP +L ++F
Sbjct: 9 RISEYNYPLPDERIAKFPLPVRDQSKLLIYRHG-----EVNEDIFTSLPDYLPKGSLMIF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------------WSVYARPSKVI 109
NNTKVI A+L+ + I + PN W K
Sbjct: 64 NNTKVIQARLHFRKE-----TGALIEVFCLEPIQPNDYVLNFQQTEHAAWLCMIGNLKKW 118
Query: 110 KKGDI----------LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGT 159
K G++ + + G+ R + +D ++ + + + + G
Sbjct: 119 KDGELKREMTVKGFPITLTATRGECRGTSHWVD--------FTWNNAEVTFADILEVFGE 170
Query: 160 IPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVT 219
+P+PPY+ R + D YQT Y+KI+GSVAAPTAGLHFT +L L GI++ +T
Sbjct: 171 LPIPPYLNRN--TEESDKETYQTVYSKIKGSVAAPTAGLHFTPQVLDALQEKGIELEELT 228
Query: 220 LHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET- 278
LHVGAGTF PVK E+ + H MH+E ++ T + + G V+VGTTS+R LE+
Sbjct: 229 LHVGAGTFKPVKSEEIEGHEMHTEYISVNRST---IKKLIDHDGCAVAVGTTSVRTLESL 285
Query: 279 ------------ATTEDGIINPWSGF------------------------------TNIF 296
AT E+ + W + T I
Sbjct: 286 YHIGVTLAENPDATEEELHVRQWQPYEKYDQIPPVVALQKILGYLDRHGMETLHTSTQII 345
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY ++ V +++NFH P+STLL+LVSAF + +Y +A+SH +RF SYGD+SLL
Sbjct: 346 IAPGYDYKIVKAMVTNFHQPQSTLLLLVSAFV-KGNWRTIYDYALSHDFRFLSYGDSSLL 404
Query: 357 FQ 358
Sbjct: 405 IP 406
>gi|224535925|ref|ZP_03676464.1| hypothetical protein BACCELL_00789 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522453|gb|EEF91558.1| hypothetical protein BACCELL_00789 [Bacteroides cellulosilyticus
DSM 14838]
Length = 409
Score = 332 bits (852), Expect = 5e-89, Method: Composition-based stats.
Identities = 128/417 (30%), Positives = 195/417 (46%), Gaps = 76/417 (18%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ EF++ LP RIA P+ RD ++L+V +S+ + LP++L + ++F
Sbjct: 9 RISEFNYPLPDERIAKFPLPVRDQSKLLVYRHG-----EVSEDRFTSLPSYLPTGSLMIF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------------WSVYARPSKVI 109
NNTKVI A+L+ + I + PN W K
Sbjct: 64 NNTKVIQARLHFRKE-----TGALIEVFCLEPIEPNDYVLNFQQTEHAAWLCMIGNLKKW 118
Query: 110 KKGD-ILHFFSQDGQSRLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIA 167
K+G ++ L AT + T + + I + + G +P+PPY+
Sbjct: 119 KEGTLKREMTVKEQPITLTATRGECHGTSHWVDFRWDNPEITFADILEVFGELPIPPYLN 178
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R D YQT Y+KI+GSVAAPTAGLHFT +L+ L G+ + +TLHVGAGTF
Sbjct: 179 RD--TQESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLNALKEKGVDLEELTLHVGAGTF 236
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK + + H MH+E + T + ++ G+ ++VGTTS+R LE+
Sbjct: 237 KPVKSAEIEGHEMHTEYISVSRGT---IENLIVHNGKAIAVGTTSVRTLESLYHIGVTLL 293
Query: 279 ----ATTEDGIINPWSGF---------------------------------TNIFITPGY 301
AT E+ ++ W + T I I PGY
Sbjct: 294 KNPNATEEELHVHQWQPYETAEETASITSVKALQAILDYLNRHDMEALHTSTQIIIAPGY 353
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
++ V+ +++NFH P+STLL+LVSAF + +Y A++H +RF SYGD+SLL
Sbjct: 354 DYKIVNTMVTNFHQPQSTLLLLVSAFV-KGNWRNIYDFALNHDFRFLSYGDSSLLIP 409
>gi|327389602|gb|EGE87947.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptococcus pneumoniae GA04375]
Length = 316
Score = 332 bits (851), Expect = 6e-89, Method: Composition-based stats.
Identities = 102/278 (36%), Positives = 145/278 (52%), Gaps = 20/278 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M +FDF LP IA P+ RD+++L++V+ + D + L DA+V
Sbjct: 1 MNTADFDFHLPEELIAQTPLEKRDASKLLIVNRETG---EMQDKHFHSIIDMLEPGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L G + + L S + W V A+P+K +K G + F
Sbjct: 58 MNDTRVLPARLYGQKV----ETGGHVELLLLKNTSGDEWEVLAKPAKRLKVGTRISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G RL A V ++ G ++ F GI LE + +G +PLPPYI K D Y
Sbjct: 111 -GDGRLSAVVTEELTHGGRIVRFEYQGIFLE-VLESLGEMPLPPYIHEKLD----DRERY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YAK GS AAPTAGLHFT LL+ + + G+ + ++TLHVG GTF PV V++ D+H M
Sbjct: 165 QTVYAKESGSAAAPTAGLHFTKELLAEIQAKGVHLVYLTLHVGLGTFRPVSVDNLDEHEM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET 278
HSE + A L SVK ++V V + S LL
Sbjct: 225 HSEFYQLSEEAAATLRSVK----KMVVVSSLSEPLLSA 258
>gi|295086575|emb|CBK68098.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Bacteroides xylanisolvens XB1A]
Length = 406
Score = 332 bits (851), Expect = 7e-89, Method: Composition-based stats.
Identities = 128/414 (30%), Positives = 191/414 (46%), Gaps = 73/414 (17%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ E+ + LP RIA P+ RD ++L++ +S+ + + LP +L ++F
Sbjct: 9 HISEYSYPLPDERIAKFPLPTRDQSKLLIYRRG-----EVSEDVFTSLPEYLPQGSLMIF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------------WSVYARPSKVI 109
NNTKVI A+L+ + I + PN W K
Sbjct: 64 NNTKVIQARLHFRKE-----TGALIEVFCLEPIQPNDYVLNFQQTAHAAWLCMIGNLKKW 118
Query: 110 KKGDILHFFSQDG-QSRLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIA 167
K G + + G L AT + T + + + + + G +P+PPY+
Sbjct: 119 KDGQLKREMTVKGFPITLTATRGECKGTSHWVDFAWDNPEVTFADILEVFGELPIPPYLN 178
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R + D YQT Y+KI+GSVAAPTAGLHFT +L L GI + +TLHVGAGTF
Sbjct: 179 RD--TEESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALQKKGIDLEELTLHVGAGTF 236
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK E+ + H MH+E ++ T + + G ++VGTTS+R LE+
Sbjct: 237 KPVKSEEIEGHEMHTEYISVNRST---IKKLIDHDGCAIAVGTTSVRTLESLYHIGVTLA 293
Query: 279 ----ATTEDGIINPWSGF------------------------------TNIFITPGYRFR 304
AT E+ + W + T I I PGY ++
Sbjct: 294 ENPYATEEELRVKQWQPYEKYDQIPPVVALQKILGYLDRNGLETLHTSTQIIIAPGYNYK 353
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
V +++NFH P+STLL+LVSAF +Y +A++H +RF SYGD+SLL
Sbjct: 354 IVKAIVTNFHQPQSTLLLLVSAFV-KGNWHTIYDYALAHDFRFLSYGDSSLLIP 406
>gi|304382535|ref|ZP_07365030.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
marshii DSM 16973]
gi|304336366|gb|EFM02607.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
marshii DSM 16973]
Length = 406
Score = 332 bits (851), Expect = 7e-89, Method: Composition-based stats.
Identities = 134/414 (32%), Positives = 201/414 (48%), Gaps = 73/414 (17%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ ++++ LP RIA PV PRD ++L+V I++ LP L +V+
Sbjct: 9 RIADYNYLLPEERIAKYPVTPRDHSKLLVYRHG-----AITEEKFYRLPQLLPQGALMVY 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP------------NSWSVYARPSKVI 109
NNTKVI A+++ + +I L ++P +W K
Sbjct: 64 NNTKVIQARIHFRK-----DTGAQIEVFLLEPLTPADYELMFQSRRRCTWLCLVGNLKKW 118
Query: 110 KKGDILHFFSQDGQS-RLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIA 167
K+G + S G+ L AT + +G + + + + VG +P+PPY+
Sbjct: 119 KEGTLTRTLSIQGEPFTLTATREEAMRSGHRITFEWDNPRVSFAEILEAVGELPIPPYLN 178
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R D YQT Y+KI+GSVAAPTAGLHFT+++L L + GI+ VTLHVGAGTF
Sbjct: 179 --RATQESDKQTYQTVYSKIKGSVAAPTAGLHFTNDVLQALDTAGIEREEVTLHVGAGTF 236
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK E+ + H MH+E + T + L K G ++VGTTS+R LE+
Sbjct: 237 KPVKAEEIEGHEMHTEYICVHQETLEKLIMHK---GHAIAVGTTSVRTLESLYYIGLKLK 293
Query: 279 ----ATTEDGIINPWSGF------------------------------TNIFITPGYRFR 304
+ E+ +N W + T I I PGY ++
Sbjct: 294 ANPQLSEEELHVNQWEPYEQEATLTPVEAIIRVLDYLYRNQLKTLHTSTQIIIAPGYEYK 353
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
V +L++NFH P+STLL+LVSAF + +++Y +A+ H +RF SYGD+SLL
Sbjct: 354 IVKMLITNFHQPQSTLLLLVSAFVKGD-WRRIYDYALDHDFRFLSYGDSSLLIP 406
>gi|298480286|ref|ZP_06998484.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. D22]
gi|298273567|gb|EFI15130.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. D22]
Length = 406
Score = 332 bits (851), Expect = 7e-89, Method: Composition-based stats.
Identities = 128/414 (30%), Positives = 192/414 (46%), Gaps = 73/414 (17%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ E+ + LP RIA P+ RD ++L++ +S+ + + LP +L ++F
Sbjct: 9 HISEYSYPLPDERIAKFPLPTRDQSKLLIYRRE-----EVSEDVFTSLPEYLPQGSLMIF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------------WSVYARPSKVI 109
NNTKVI A+L+ + I + PN W K
Sbjct: 64 NNTKVIQARLHFRKE-----TGALIEVFCLEPIQPNDYVLNFQQTAHAAWLCMIGNLKKW 118
Query: 110 KKGDILHFFSQDG-QSRLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIA 167
K G + + G L AT + T + + + + + G +P+PPY+
Sbjct: 119 KDGQLKREMTVKGFPITLTATRGECKGTSHWVDFAWDNPEVTFADILEVFGELPIPPYLN 178
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R + D YQT Y+KI+GSVAAPTAGLHFT +L L GI + +TLHVGAGTF
Sbjct: 179 RD--TEESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALQEKGIDLEELTLHVGAGTF 236
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK E+ + H MH+E ++ T + + G ++VGTTS+R LE+
Sbjct: 237 KPVKSEEIEGHEMHTEYISVNRST---IKKLIDHDGCAIAVGTTSVRTLESLYHIGVTLA 293
Query: 279 ----ATTEDGIINPWSGF------------------------------TNIFITPGYRFR 304
AT E+ + W + T I I PGY ++
Sbjct: 294 ENPYATEEELRVKQWQPYEKYDQIPPVVALQKILGYLDRNGLETLHTSTQIIIAPGYNYK 353
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
V +++NFH P+STLL+LVSAF + +Y +A++H +RF SYGD+SLL
Sbjct: 354 IVKAMVTNFHQPQSTLLLLVSAFV-KGNWRTIYDYALAHDFRFLSYGDSSLLIP 406
>gi|160890857|ref|ZP_02071860.1| hypothetical protein BACUNI_03302 [Bacteroides uniformis ATCC 8492]
gi|317479715|ref|ZP_07938837.1| queuosine biosynthesis protein [Bacteroides sp. 4_1_36]
gi|156859856|gb|EDO53287.1| hypothetical protein BACUNI_03302 [Bacteroides uniformis ATCC 8492]
gi|316904085|gb|EFV25917.1| queuosine biosynthesis protein [Bacteroides sp. 4_1_36]
Length = 409
Score = 331 bits (850), Expect = 9e-89, Method: Composition-based stats.
Identities = 134/417 (32%), Positives = 201/417 (48%), Gaps = 76/417 (18%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ EF++ LP RIA P+ RD ++L++ +S+ + LP +L S ++F
Sbjct: 9 RISEFNYPLPDERIAKFPLSVRDQSKLLLYRHG-----EVSEDRFTSLPEYLPSGSLMIF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------------WSVYARPSKVI 109
NNTKVI A+L+ + I + PN W K
Sbjct: 64 NNTKVIQARLHFRKE-----TGALIEVFCLEPIQPNDYALNFQQTEHAAWLCMVGNLKKW 118
Query: 110 KKGDILHFFSQDGQS-RLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIA 167
K+G + + G+S L A + T + ++ + + + G +P+PPY+
Sbjct: 119 KEGMLRREMTVKGKSLTLTAERGECHGTSHWINFRWNNPEVTFADILEVFGELPIPPYLN 178
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R+ D YQT Y+KI+GSVAAPTAGLHFT +L L + G+++ +TLHVGAGTF
Sbjct: 179 RE--TQESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALRNKGVELEELTLHVGAGTF 236
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK E+ + H MH+E + T L + GG+ V+VGTTS+R LE+
Sbjct: 237 KPVKSEEIEGHEMHTEYISVSRNT---LEKLIVHGGKAVAVGTTSVRTLESLYHIGVTLL 293
Query: 279 ----ATTEDGIINPWSGF---------------------------------TNIFITPGY 301
AT ED ++ W + T I I PGY
Sbjct: 294 NNPEATEEDLHVHQWQPYEMSAKATATSAVEALQAIAAYLDRHSMEALHTSTQIIIAPGY 353
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
++ V +++NFH P+STLL+LVSAF + K+Y +A++H +RF SYGD+SLL
Sbjct: 354 EYKIVKAMVTNFHQPQSTLLLLVSAFV-HGDWPKIYNYALAHDFRFLSYGDSSLLIP 409
>gi|319899927|ref|YP_004159655.1| Queuosine biosynthesis protein [Bacteroides helcogenes P 36-108]
gi|319414958|gb|ADV42069.1| Queuosine biosynthesis protein [Bacteroides helcogenes P 36-108]
Length = 409
Score = 331 bits (849), Expect = 1e-88, Method: Composition-based stats.
Identities = 128/425 (30%), Positives = 194/425 (45%), Gaps = 92/425 (21%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ EF++ LP RIA P+ RD ++L++ +S+ + LP +L + ++F
Sbjct: 9 HISEFNYPLPDERIAKFPLSVRDQSKLLIYRHGN-----VSEDTFTSLPEYLTAGSLMIF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------------WSVYARPSKVI 109
NNTKVI A+L+ + I + PN W K
Sbjct: 64 NNTKVIQARLHFRK-----DTGALIEVFCLEPIEPNDYALNFQQTEHAAWLCMIGNLKKW 118
Query: 110 KKG----------DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGT 159
K+G ++ ++ G+ + +D + + + + G
Sbjct: 119 KEGVLKREMEVKGKMITLTAERGECHGTSHWVD--------FRWDNPEVTFADILEVFGE 170
Query: 160 IPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVT 219
+P+PPY+ R+ D YQT Y+KI+GSVAAPTAGLHFT +L L GI+ +T
Sbjct: 171 LPIPPYLNRE--TQESDKETYQTVYSKIKGSVAAPTAGLHFTPQVLDALRDKGIETEELT 228
Query: 220 LHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET- 278
LHVGAGTF PVK E+ + H MH+E + T L + + G+ ++VGTTS+R LE+
Sbjct: 229 LHVGAGTFKPVKSEEIEGHEMHTEYISVSRNT---LKRLIAHEGKAIAVGTTSVRTLESL 285
Query: 279 ------------ATTEDGIINPWSGF---------------------------------T 293
A D + W + T
Sbjct: 286 YHIGVTLLNNPDAKETDLHVKQWQPYEIPAEATPILATDALQAIIRYLDRHDMETLHTST 345
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
I I PGY +R V +++NFH P+STLL+LVSAF + +K+Y +A+ H +RF SYGD+
Sbjct: 346 QIIIAPGYEYRIVKAMVTNFHQPQSTLLLLVSAFV-HGDWRKVYNYALEHNFRFLSYGDS 404
Query: 354 SLLFQ 358
SLL
Sbjct: 405 SLLIP 409
>gi|253566303|ref|ZP_04843757.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 3_2_5]
gi|251945407|gb|EES85845.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 3_2_5]
Length = 406
Score = 331 bits (849), Expect = 1e-88, Method: Composition-based stats.
Identities = 126/414 (30%), Positives = 188/414 (45%), Gaps = 73/414 (17%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ E+++ LP RIA P+ RD ++L++ +S+ + + LP +L + ++F
Sbjct: 9 RISEYNYPLPDERIAKFPLPVRDQSKLLIYRHG-----EVSEDVFTSLPEYLPAGSLMIF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------------WSVYARPSKVI 109
NNTKVI A+L+ + I + PN W K
Sbjct: 64 NNTKVIQARLHFRKE-----TGALIEVFCLEPIQPNDYVLNFQQTEHAAWLCMVGNLKKW 118
Query: 110 KKGDILHFFSQDG-QSRLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIA 167
K G + + G L AT + T + + + + + G +P+PPY+
Sbjct: 119 KDGPLCREMTVKGFPITLTATRGECRGTSHWIDFRWDNPEVTFADILEVFGELPIPPYLN 178
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R + D YQT Y+KI+GSVAAPTAGLHFT +L L GI + +TLHVGAGTF
Sbjct: 179 RD--TEESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALTEKGIDLEELTLHVGAGTF 236
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK E+ + H MH+E + + + ++VGTTS+R LE+
Sbjct: 237 KPVKSEEIEGHEMHTEYISVSRS---IIKKLIDHDACAIAVGTTSVRTLESLYHIGVTLA 293
Query: 279 ----ATTEDGIINPWSGF------------------------------TNIFITPGYRFR 304
AT E + W + T I I PGY ++
Sbjct: 294 NNPEATEEQLHVKQWQPYETECDVRPVVALQKILGYLDRHGMEALHTSTQIIIAPGYDYK 353
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
V +++NFH P+STLL+LVSAF +Y +A+ H +RF SYGD+SLL
Sbjct: 354 IVKAMVTNFHQPQSTLLLLVSAFV-KGNWHTIYDYALGHDFRFLSYGDSSLLIP 406
>gi|60683103|ref|YP_213247.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides fragilis NCTC 9343]
gi|60494537|emb|CAH09336.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides fragilis NCTC 9343]
gi|301164615|emb|CBW24174.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides fragilis 638R]
Length = 407
Score = 331 bits (849), Expect = 1e-88, Method: Composition-based stats.
Identities = 126/414 (30%), Positives = 188/414 (45%), Gaps = 73/414 (17%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ E+++ LP RIA P+ RD ++L++ +S+ + + LP +L + ++F
Sbjct: 10 RISEYNYPLPDERIAKFPLPVRDQSKLLIYRHG-----EVSEDVFTSLPEYLPAGSLMIF 64
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------------WSVYARPSKVI 109
NNTKVI A+L+ + I + PN W K
Sbjct: 65 NNTKVIQARLHFRKE-----TGALIEVFCLEPIQPNDYVLNFQQTEHAAWLCMVGNLKKW 119
Query: 110 KKGDILHFFSQDG-QSRLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIA 167
K G + + G L AT + T + + + + + G +P+PPY+
Sbjct: 120 KDGPLCREMTVKGFPITLTATRGECRGTSHWIDFRWDNPEVTFADILEVFGELPIPPYLN 179
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R + D YQT Y+KI+GSVAAPTAGLHFT +L L GI + +TLHVGAGTF
Sbjct: 180 RD--TEESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALTEKGIDLEELTLHVGAGTF 237
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK E+ + H MH+E + + + ++VGTTS+R LE+
Sbjct: 238 KPVKSEEIEGHEMHTEYISVSRS---IIKKLIDHDACAIAVGTTSVRTLESLYHIGVTLA 294
Query: 279 ----ATTEDGIINPWSGF------------------------------TNIFITPGYRFR 304
AT E + W + T I I PGY ++
Sbjct: 295 NNPEATEEQLHVKQWQPYETECDVRPVVALQKILGYLDRHGMEALHTSTQIIIAPGYDYK 354
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
V +++NFH P+STLL+LVSAF +Y +A+ H +RF SYGD+SLL
Sbjct: 355 IVKAMVTNFHQPQSTLLLLVSAFV-KGNWHTIYDYALGHDFRFLSYGDSSLLIP 407
>gi|311746512|ref|ZP_07720297.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Algoriphagus sp. PR1]
gi|311302533|gb|EFQ79227.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Algoriphagus sp. PR1]
Length = 405
Score = 331 bits (848), Expect = 1e-88, Method: Composition-based stats.
Identities = 132/411 (32%), Positives = 199/411 (48%), Gaps = 73/411 (17%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+K +++ LP RIA P+ RDS++L++ I ++P + S +V+N
Sbjct: 10 LKAYEYTLPEDRIAKFPLEKRDSSKLLLY-----KNKSIQHLQFYNIPELIPSESLLVYN 64
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS-------------WSVYARPSKVI 109
+TKVI A+L R I L V+P + W +K
Sbjct: 65 DTKVIPARLIFQRV-----TGARIEIFLLQPVAPTTVIPEIMLAKHPVTWETMIGNAKKW 119
Query: 110 KKGDILH--FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIA 167
K+G+ LH D +L A ++DK N + + I + G +PLPPY+
Sbjct: 120 KEGETLHGLVTLGDKNIKLSAQLVDK-NQRRVTFSWDDPEISFVDVVEGSGEVPLPPYLN 178
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
RK D D YQT Y++ +G+VAAPTAGLHFT+ +LS+L G++ VTLHV AGTF
Sbjct: 179 RKPVED--DKNRYQTVYSEKEGAVAAPTAGLHFTNEILSKLKEKGVQTEQVTLHVSAGTF 236
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED---- 283
P+K E +H MHSE I A+ + G+I++VGTTS+R LE+
Sbjct: 237 QPIKAEKITEHPMHSEQVHIPIG---AIKNFIKHAGQIIAVGTTSVRTLESLYWFGVRLI 293
Query: 284 ----------------------GIINPWS---------------GFTNIFITPGYRFRAV 306
+ + G T IFI PGY+++ V
Sbjct: 294 RKETLEFFIPKLYPYENIENLPSSVEAFQSILEHMEKHNLDTLVGSTEIFIFPGYQYKVV 353
Query: 307 DILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
L++NFH P STL++L++ G ++ KK+Y+ A+++ YRF SYGD+SLL+
Sbjct: 354 KGLITNFHQPGSTLILLIATILG-DDWKKVYEEALNNNYRFLSYGDSSLLW 403
>gi|270295861|ref|ZP_06202061.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. D20]
gi|270273265|gb|EFA19127.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. D20]
Length = 409
Score = 331 bits (848), Expect = 1e-88, Method: Composition-based stats.
Identities = 133/417 (31%), Positives = 200/417 (47%), Gaps = 76/417 (18%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ EF++ LP RIA P+ RD ++L++ +S+ + LP +L S ++F
Sbjct: 9 RISEFNYPLPDERIAKFPLSVRDQSKLLLYRHG-----EVSEDRFTSLPEYLPSGSLMIF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------------WSVYARPSKVI 109
NNTKVI A+L+ + I + PN W K
Sbjct: 64 NNTKVIQARLHFRKE-----TGALIEVFCLEPIQPNDYALNFQQTEHTAWLCMVGNLKKW 118
Query: 110 KKGDILHFFSQDGQS-RLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIA 167
K+G + + G+ L A + T + ++ + + + G +P+PPY+
Sbjct: 119 KEGMLRREMTVKGKPLTLTAERGECHGTSHWVNFRWNNPEVTFADILEVFGELPIPPYLN 178
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R+ D YQT Y+KI+GSVAAPTAGLHFT +L L + G+++ +TLHVGAGTF
Sbjct: 179 RE--TQESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALRNKGVELEELTLHVGAGTF 236
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK E+ + H MH+E + T L + GG+ V+VGTTS+R LE+
Sbjct: 237 KPVKSEEIEGHEMHTEYISVSRNT---LEKLIVHGGKAVAVGTTSVRTLESLYHIGVTLL 293
Query: 279 ----ATTEDGIINPWSGF---------------------------------TNIFITPGY 301
AT ED ++ W + T I I PGY
Sbjct: 294 NNPEATEEDLHVHQWQPYEMSAKATATSAVEALQAIVAYLDRHSMEALHTSTQIIIAPGY 353
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
++ V +++NFH P+STLL+LVSAF + K+Y +A++H +RF SYGD+SLL
Sbjct: 354 EYKIVKAMVTNFHQPQSTLLLLVSAFV-HGDWPKIYNYALAHDFRFLSYGDSSLLIP 409
>gi|237714439|ref|ZP_04544920.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. D1]
gi|262408269|ref|ZP_06084816.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 2_1_22]
gi|294645388|ref|ZP_06723097.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides ovatus SD CC 2a]
gi|294806152|ref|ZP_06765004.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides xylanisolvens SD CC 1b]
gi|229445603|gb|EEO51394.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. D1]
gi|262353821|gb|EEZ02914.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 2_1_22]
gi|292639280|gb|EFF57589.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides ovatus SD CC 2a]
gi|294446666|gb|EFG15281.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides xylanisolvens SD CC 1b]
Length = 406
Score = 331 bits (848), Expect = 1e-88, Method: Composition-based stats.
Identities = 129/414 (31%), Positives = 192/414 (46%), Gaps = 73/414 (17%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ E+ + LP RIA P+ RD ++L++ IS+ + + LP +L ++F
Sbjct: 9 HISEYSYPLPDERIAKFPLPTRDQSKLLIYRRG-----EISEDVFTSLPEYLLQGSLMIF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------------WSVYARPSKVI 109
NNTKVI A+L+ + I + PN W K
Sbjct: 64 NNTKVIQARLHFRKE-----TGALIEVFCLEPIQPNDYVLNFQQTAHAAWLCMIGNLKKW 118
Query: 110 KKGDILHFFSQDG-QSRLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIA 167
K G + + G L AT + T + + + + + G +P+PPY+
Sbjct: 119 KDGQLKREMTVKGFPITLTATRGECKGTSHWVDFAWDNPEVTFADILEVFGELPIPPYLN 178
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R + D YQT Y+KI+GSVAAPTAGLHFT +L L GI + +TLHVGAGTF
Sbjct: 179 RD--TEESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALQEKGIDLEELTLHVGAGTF 236
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK E+ + H MH+E ++ T + + G ++VGTTS+R LE+
Sbjct: 237 KPVKSEEIEGHEMHTEYISVNRST---IKKLIDHDGCAIAVGTTSVRTLESLYHIGVTLA 293
Query: 279 ----ATTEDGIINPWSGF------------------------------TNIFITPGYRFR 304
AT E+ + W + T I I PGY ++
Sbjct: 294 ENPYATEEELRVKQWQPYEKYDQIPPVVALQKILGYLDRNGLETLHTSTQIIIAPGYNYK 353
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
V +++NFH P+STLL+LVSAF + +Y +A++H +RF SYGD+SLL
Sbjct: 354 IVKAMVTNFHQPQSTLLLLVSAFV-KGNWRTIYDYALAHDFRFLSYGDSSLLIP 406
>gi|323345330|ref|ZP_08085553.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
oralis ATCC 33269]
gi|323093444|gb|EFZ36022.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
oralis ATCC 33269]
Length = 404
Score = 331 bits (848), Expect = 1e-88, Method: Composition-based stats.
Identities = 135/414 (32%), Positives = 203/414 (49%), Gaps = 73/414 (17%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ ++++ LP RIA P+ RD ++L+V +SD L +LP +L +VF
Sbjct: 7 HISDYNYQLPDERIAKFPISQRDHSKLLVY-----KHGEVSDDLFYNLPEYLPKGALMVF 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP------------NSWSVYARPSKVI 109
NNTKVI A+++ + +I L V P SW K
Sbjct: 62 NNTKVIQARIHFRKE-----TGAQIEVFLLEPVDPTDYELMFQTSEHCSWLCMIGNLKKW 116
Query: 110 KKGDILHFFSQDGQS-RLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIA 167
K+G + F +G L A +++ TG + ++ + + + VG +P+PPY+
Sbjct: 117 KEGILKRDFEINGHRLTLIAARKEEYGTGHWVDFSWNNNKVSFAEILETVGELPIPPYLN 176
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R D YQT Y+KI+GSVAAPTAGLHFT ++L L + GI +TLHVGAGTF
Sbjct: 177 RD--TQESDKTTYQTVYSKIKGSVAAPTAGLHFTDSVLKDLDTHGIDREELTLHVGAGTF 234
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK ++ + H MH+E + T L + + ++VGTTS+R LE+
Sbjct: 235 KPVKSDEIEGHKMHTEYICVHRQT---LEKLLKHDCQAIAVGTTSVRTLESLYYMGVYLA 291
Query: 279 ----ATTEDGIINPWSGF------------------------------TNIFITPGYRFR 304
AT E+ + W+ + T I I PGY ++
Sbjct: 292 AHPDATEEELHVGQWTPYETKAMLTPMEAIKNVLSYLDRNGLSALHSSTQIIIAPGYEYK 351
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
V +L++NFH P+STLL+LVSAF + + +Y +A+SH +RF SYGD+SLL
Sbjct: 352 IVKMLVTNFHQPQSTLLLLVSAFV-YGDWRTIYNYALSHDFRFLSYGDSSLLIP 404
>gi|293372292|ref|ZP_06618677.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides ovatus SD CMC 3f]
gi|292632734|gb|EFF51327.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides ovatus SD CMC 3f]
Length = 406
Score = 330 bits (847), Expect = 2e-88, Method: Composition-based stats.
Identities = 126/422 (29%), Positives = 192/422 (45%), Gaps = 89/422 (21%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ E+ + LP RIA P+ RD ++L++ +S+ + + LP +L ++F
Sbjct: 9 HISEYSYPLPDERIAKFPLPTRDQSKLLIYRRG-----EVSEDVFTSLPEYLPQGSLMIF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------------WSVYARPSKVI 109
NNTKVI A+L+ + I + PN W K
Sbjct: 64 NNTKVIQARLHFRKE-----TGALIEVFCLEPIQPNDYVLNFQQTAHAAWLCMIGNLKKW 118
Query: 110 K----------KGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGT 159
K KG + + G+ + + +D + + + + G
Sbjct: 119 KDRQLKREMTVKGFPITLTATRGECKGTSHWVD--------FAWDNPEVTFADILEVFGE 170
Query: 160 IPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVT 219
+P+PPY+ R + D YQT Y+KI+GSVAAPTAGLHFT +L L GI + +T
Sbjct: 171 LPIPPYLNRD--TEESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALQEKGINLEELT 228
Query: 220 LHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET- 278
LHVGAGTF PVK E+ + H MH+E ++ T + + G ++VGTTS+R LE+
Sbjct: 229 LHVGAGTFKPVKSEEIEGHEMHTEYISVNRST---IKKLIDHDGCAIAVGTTSVRTLESL 285
Query: 279 ------------ATTEDGIINPWSGF------------------------------TNIF 296
AT E+ + W + T I
Sbjct: 286 YHIGVTLAENPYATEEELRVKQWQPYEKYDQIPPVVALQKILGYLDRNGLETLHTSTQII 345
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY ++ V +++NFH P+STLL+LVSAF + +Y +A++H +RF SYGD+SLL
Sbjct: 346 IAPGYNYKIVKAMVTNFHQPQSTLLLLVSAFV-KGNWRTIYDYALAHDFRFLSYGDSSLL 404
Query: 357 FQ 358
Sbjct: 405 IP 406
>gi|148925938|ref|ZP_01809625.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni CG8486]
gi|145844924|gb|EDK22028.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni CG8486]
Length = 339
Score = 330 bits (847), Expect = 2e-88, Method: Composition-based stats.
Identities = 123/353 (34%), Positives = 183/353 (51%), Gaps = 31/353 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+++ +D+ L IA P P++ ARL+V I +L FL N AI
Sbjct: 5 LLLSSYDYTLANELIANYPTNPKEDARLLVFDRK---NKEIFHTTFKNLHDFL-PNCAIF 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMR-VSPNSWSVYARPSKVIKKGDILHFFS 119
FN+TKVI A++ G + +I LH ++ ++ A+ +KK +IL+F
Sbjct: 61 FNDTKVIKARIYGNKAS-----GGKIELFLHQPFLNSHNPLFLAQIKGRVKKDEILYFKE 115
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELE-----RQISLVGTIPLPPYIARKRPIDA 174
L+A V++ N G + F + L+ + +G IPLPPYI KR +
Sbjct: 116 D-----LKARVVELLNDGLRKVHFFQNDKTLDTSNLYNLLDKIGHIPLPPYI--KREDEK 168
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D DYQ+ +AK G+VAAPTA LHF+ +L L ++Y +TLHVGAGTF V+ E+
Sbjct: 169 SDLKDYQSIFAKNLGAVAAPTASLHFSETMLENLRKKH-EIYHLTLHVGAGTFKSVECEN 227
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
+H MHSE I + ++S ++ I+ VGTT R +E T +GF +
Sbjct: 228 IQEHKMHSEFFNIPQQACEIIDSKQA----ILGVGTTVTRTIEYYTRT----KTKNGFCD 279
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
+F+ P + L++NFHLPKSTL+MLVSAF G E+ K+Y+ AI F
Sbjct: 280 LFLHPQNPPIRQNHLLTNFHLPKSTLIMLVSAFIGREQCLKLYELAIKENIAF 332
>gi|317502932|ref|ZP_07961027.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
salivae DSM 15606]
gi|315665966|gb|EFV05538.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
salivae DSM 15606]
Length = 422
Score = 330 bits (847), Expect = 2e-88, Method: Composition-based stats.
Identities = 137/426 (32%), Positives = 208/426 (48%), Gaps = 85/426 (19%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ ++D++LP RIA P+ RD ++L++ IS+ L +LP +L +VF
Sbjct: 13 KINDYDYNLPEERIAKFPLANRDHSKLLIY-----KHGDISEDLFYNLPNYLPKQSLMVF 67
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN------------SWSVYARPSKVI 109
NNTKVI A+++ + I L SP+ SW K
Sbjct: 68 NNTKVIQARIHFRKE-----TGALIEIFLMEPASPSDYELMFQTKGHCSWLCMVGNLKKW 122
Query: 110 KKGDILHFFSQDGQSR-LEATVIDKWNTGE-------ILLVFSISGIELERQISLVGTIP 161
K+G + +F G+S+ L A++ + + + + + +VG +P
Sbjct: 123 KEGSLKRYFVIAGKSQTLSASLHKEKTNQSSTGTNYWVDFDWDNDNVNFAEILEVVGELP 182
Query: 162 LPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLH 221
+PPY+ R+ D YQT Y+KI+GSVAAPTAGLHFT+ +L + GI+ +TLH
Sbjct: 183 IPPYLNRE--TQDSDKKTYQTVYSKIKGSVAAPTAGLHFTNEVLHAIDEHGIEREELTLH 240
Query: 222 VGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--- 278
VGAGTF PVK E+ D H MH+E + T +N +K G ++VGTTS+R LE+
Sbjct: 241 VGAGTFKPVKSEEIDQHEMHTEYIVVHRHT--LINLLK-YGCNAIAVGTTSVRTLESLYY 297
Query: 279 ----------ATTEDGIINPWS------------------------------------GF 292
A+ ++ +N W G
Sbjct: 298 IGVKLEQNPDASEDELHVNQWEPYEQSHDGGLVKDITAERSLQNIIDWLDKSDVKVLHGS 357
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T I I PGY+++ V +L++NFH P+STLL+LVSAF + K +Y +A++H +RF SYGD
Sbjct: 358 TQIIIAPGYKYKIVKMLITNFHQPQSTLLLLVSAFVNGD-WKCIYDYALTHDFRFLSYGD 416
Query: 353 TSLLFQ 358
+SLL
Sbjct: 417 SSLLIP 422
>gi|32266986|ref|NP_861018.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter hepaticus ATCC 51449]
gi|46576948|sp|Q7VG37|QUEA_HELHP RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
gi|32263038|gb|AAP78084.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Helicobacter hepaticus ATCC 51449]
Length = 365
Score = 330 bits (847), Expect = 2e-88, Method: Composition-based stats.
Identities = 113/365 (30%), Positives = 183/365 (50%), Gaps = 24/365 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ +D+ LP S IA P PR+ A+L++ + I F+ + +VFN
Sbjct: 15 LSSYDYTLPFSAIAQNPANPRERAKLLIYQRDSG---RIIHSDFYHFCDFVPKDTLLVFN 71
Query: 63 NTKVITAQLNGVRFCHINRR--EKEISCTLHMRVSPNSWSV---YARPSKVIKKGDILHF 117
+T+VI A++ + ++ +K H + S ++ + +K GD L
Sbjct: 72 DTRVIKARIYAHKLDCNTQKLSDKTFEIFYHKPLQSTSSAIPLFLVQIKGRVKCGDKLLI 131
Query: 118 FSQDGQSRLEATVIDKWNTGEILL-----VFSISGIELERQISLVGTIPLPPYIARKRPI 172
+ L A V + + G ++ ++ I++ + G PLPPYI KR
Sbjct: 132 NTDSTNPFLIAQVQECLDNGLRVVSFMQNEHALEYIQVLDMLEKYGHTPLPPYI--KRED 189
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+D YQ+ ++K GS+AAPTA LHF+ + + + + F+TLH+GAGTFM V+
Sbjct: 190 SCQDAHFYQSVFSKQLGSIAAPTASLHFSKESIESIKAQ-FETCFLTLHIGAGTFMNVES 248
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
D H++H E + +A A+ + +++ +GTTS R +E G
Sbjct: 249 ADIRHHLIHKEFFSLSPQSAAAIQNA----HKVLCIGTTSARCVEYYAR----YKILQGE 300
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
+IF+ P F+ VD L++NFHLPKSTL+MLVSA G E+ ++Y+ A+ YRFYSYGD
Sbjct: 301 CDIFLYPSKSFKRVDYLLTNFHLPKSTLMMLVSAMVGREKCLELYKLALEKGYRFYSYGD 360
Query: 353 TSLLF 357
L+
Sbjct: 361 GMLIL 365
>gi|301308401|ref|ZP_07214355.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 20_3]
gi|300833871|gb|EFK64487.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 20_3]
Length = 404
Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats.
Identities = 132/414 (31%), Positives = 198/414 (47%), Gaps = 74/414 (17%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++++++ LP RIA P+ RD ++L++ IS+ + + +L N +VF
Sbjct: 7 RIEDYNYSLPDERIAKFPLPKRDESKLLLYR-----NGEISESIFKHITDYLPQNTLMVF 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN------------SWSVYARPSKVI 109
NNT+VI A+L + I + P+ SW+ K
Sbjct: 62 NNTRVIQARLLFQKE-----TGARIEIFCLEPIEPHDYALIFQETRRCSWTCLVGNLKKW 116
Query: 110 KKGDI-LHFFSQDGQSRLEA-TVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIA 167
K+G + F +D L A +T I + + G +P+PPY+
Sbjct: 117 KEGTLSKTIFIKDQPVVLTADKKKSHGDTHLIEFTWDNETYTFADILDAAGVLPIPPYLH 176
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R+ + D YQT Y+KI+GSVAAPTAGLHFT +L+ + + GI VTLHVGAGTF
Sbjct: 177 RE--TEKSDLQTYQTVYSKIKGSVAAPTAGLHFTPEVLADIDARGIGREEVTLHVGAGTF 234
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK + + H MH+E + + + +KS G I++VGTTS+R LE+
Sbjct: 235 KPVKSDTIEGHEMHTEFISVRRSS---IERIKSNLGNIIAVGTTSVRTLESLYYMGVILD 291
Query: 279 ----ATTEDGIINPWSGF-------------------------------TNIFITPGYRF 303
AT+ED ++ W + T I I PGY F
Sbjct: 292 NNPEATSEDLVVKQWMPYDTNNNRLTAERSLQNILNYLDKHDADTLVTATQIIIAPGYEF 351
Query: 304 RAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ V +++NFH PKSTLL+L+SAF K +Y++A+ H +RF SYGD+SLL
Sbjct: 352 KIVKGIVTNFHQPKSTLLLLISAFV-KGNWKSIYEYALEHDFRFLSYGDSSLLL 404
>gi|154493611|ref|ZP_02032931.1| hypothetical protein PARMER_02951 [Parabacteroides merdae ATCC
43184]
gi|154086821|gb|EDN85866.1| hypothetical protein PARMER_02951 [Parabacteroides merdae ATCC
43184]
Length = 427
Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats.
Identities = 129/414 (31%), Positives = 200/414 (48%), Gaps = 74/414 (17%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+++FD+ LP RIA P+ RD ++L++ +S+ + + +L +VF
Sbjct: 30 RIEDFDYPLPDERIAKFPLPKRDESKLLLY-----KEGKVSESIFKHITDYLPEGSLMVF 84
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN------------SWSVYARPSKVI 109
NNT+VI A+L + +I V P+ W+ K
Sbjct: 85 NNTRVIQARLLFQKE-----TGAKIEIFCLEPVEPHDYALVFQQTECCRWTCLVGNLKKW 139
Query: 110 KKGDILHFFSQDGQS-RLEATVIDK-WNTGEILLVFSISGIELERQISLVGTIPLPPYIA 167
K+G + DG++ L+A + ++ I + + G +P+PPY+
Sbjct: 140 KEGLLKKEVQLDGETVILKAEKLQTCGDSYLIEFTWDHPTCTFADLLDAAGVLPIPPYLN 199
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R+ + D YQT Y+KI+GSVAAPTAGLHFT +L+ + ++GI +TLHVGAGTF
Sbjct: 200 RE--TEKSDLQTYQTVYSKIKGSVAAPTAGLHFTPEVLAAIDALGIGREELTLHVGAGTF 257
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK E + H MH+E + + + +K+ G+I++VGTTS+R LE+
Sbjct: 258 KPVKSETIEGHEMHTEFISVRRSS---IERIKNNLGKIIAVGTTSVRTLESLYYMGVTLA 314
Query: 279 ----ATTEDGIINPWSGF-------------------------------TNIFITPGYRF 303
AT ++ I+ W + T I I PGY F
Sbjct: 315 SNPDATADELIVKQWMPYEETNNRLTADEALQNILDYLDRHQADKLVTATRIIIAPGYEF 374
Query: 304 RAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ V +++NFH PKSTLL+L+SAF K +Y +A+ H +RF SYGD+SLL
Sbjct: 375 KIVRGIVTNFHQPKSTLLLLISAFV-KGNWKNIYDYALRHDFRFLSYGDSSLLL 427
>gi|265766996|ref|ZP_06094825.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 2_1_16]
gi|263253373|gb|EEZ24849.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 2_1_16]
Length = 406
Score = 329 bits (844), Expect = 4e-88, Method: Composition-based stats.
Identities = 126/414 (30%), Positives = 187/414 (45%), Gaps = 73/414 (17%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ E+++ LP RIA P+ RD ++L++ +S+ + + LP +L + ++F
Sbjct: 9 RISEYNYPLPDERIAKFPLPVRDQSKLLIYRHG-----EVSEDVFTSLPEYLPAGSLMIF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------------WSVYARPSKVI 109
NNTKVI A+L+ + I + PN W K
Sbjct: 64 NNTKVIQARLHFRKE-----TGALIEVFCLEPIQPNDYVLNFQQMEHAAWLCMVGNLKKW 118
Query: 110 KKGDILHFFSQDG-QSRLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIA 167
K G + + G L AT + T + + + + + G +P+PPY+
Sbjct: 119 KDGPLCREMTVKGFPITLTATRGECRGTSHWIDFRWDNPEVTFADILEVFGELPIPPYLN 178
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R + D YQT Y+KI+GSVAAPTAGLHFT +L L GI + +TLHVGAGTF
Sbjct: 179 RD--TEESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALTEKGIDLEELTLHVGAGTF 236
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK E+ + H MH+E + + + +VGTTS+R LE+
Sbjct: 237 KPVKSEEIEGHEMHTEYISVSRS---IIKKLIDHDACATAVGTTSVRTLESLYHIGVTLA 293
Query: 279 ----ATTEDGIINPWSGF------------------------------TNIFITPGYRFR 304
AT E + W + T I I PGY ++
Sbjct: 294 NNPEATEEQLHVKQWQPYETECDVRPVVALQKILGYLDRHGMEALHTSTQIIIAPGYDYK 353
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
V +++NFH P+STLL+LVSAF +Y +A+ H +RF SYGD+SLL
Sbjct: 354 IVKAMVTNFHQPQSTLLLLVSAFV-KGNWHTIYDYALGHDFRFLSYGDSSLLIP 406
>gi|255037056|ref|YP_003087677.1| Queuosine biosynthesis protein [Dyadobacter fermentans DSM 18053]
gi|254949812|gb|ACT94512.1| Queuosine biosynthesis protein [Dyadobacter fermentans DSM 18053]
Length = 410
Score = 329 bits (844), Expect = 4e-88, Method: Composition-based stats.
Identities = 131/405 (32%), Positives = 183/405 (45%), Gaps = 61/405 (15%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ + +DLP RIA P+ RD ++LMV + +D+ + L +VFN
Sbjct: 11 LQSYTYDLPDDRIAKYPMEVRDQSKLMVYRGG-----ELGHLRFTDISSELPEKTLLVFN 65
Query: 63 NTKVITAQLNGVRFCH--------INRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
+TKVI A+ + + + + W K K GD
Sbjct: 66 DTKVIPARAHFKKETGAIIELLLLHPELPTRVINDAMLVTHACVWECMIGNKKRWKAGDS 125
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
L Q + V ++ + +G+ + +G IPLPPY+ R +
Sbjct: 126 LSNVIQVNGFEVHLQVSYHDYERNLVRLTWDAGVTFLDLVKALGEIPLPPYLNRD--TEE 183
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D YQT YA G+VAAPTAGLHFT + L GI F+TLHVGAGTF P+KVE
Sbjct: 184 PDKETYQTVYANHDGAVAAPTAGLHFTPRVFDELEKKGIGKAFLTLHVGAGTFQPIKVEK 243
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET---------------- 278
+H MHSE T + +N + IV VGTTSLR LE+
Sbjct: 244 VTEHRMHSEQVVF---TRELINDLVQSVDHIVPVGTTSLRSLESLYWYGVKLFAGETTDF 300
Query: 279 -----------------ATTE---------DGIINPWSGFTNIFITPGYRFRAVDILMSN 312
A G ++ G T IFI PGYRFR +++N
Sbjct: 301 HIEKLYPYPWRETELPTAAQSLQAIADHMDAGGLHEIVGETEIFIFPGYRFRLCRGIITN 360
Query: 313 FHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+H P STL++LV+AF G + KK+Y A+S+ YRF SYGD+SLL+
Sbjct: 361 YHQPGSTLILLVAAFVGND-WKKIYSEALSNDYRFLSYGDSSLLW 404
>gi|160886607|ref|ZP_02067610.1| hypothetical protein BACOVA_04618 [Bacteroides ovatus ATCC 8483]
gi|156107018|gb|EDO08763.1| hypothetical protein BACOVA_04618 [Bacteroides ovatus ATCC 8483]
Length = 406
Score = 329 bits (843), Expect = 5e-88, Method: Composition-based stats.
Identities = 127/422 (30%), Positives = 193/422 (45%), Gaps = 89/422 (21%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ E+ + LP RIA P+ RD ++L++ +S+ + + LP +L ++F
Sbjct: 9 HISEYSYPLPDERIAKFPLPTRDQSKLLIYRRG-----EVSEDVFTSLPEYLPQGSLMIF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------------WSVYARPSKVI 109
NNTKVI A+L+ + I + PN W K
Sbjct: 64 NNTKVIQARLHFRKE-----TGALIEVFCLEPIQPNDYVLNFQQTAHAAWLCMIGNLKKW 118
Query: 110 K----------KGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGT 159
K KG + + G+ + + +D + + + + G
Sbjct: 119 KDRQLKREMTVKGFPITLTATRGECKGTSHWVD--------FAWDNPEVTFADILEVFGE 170
Query: 160 IPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVT 219
+P+PPY+ R + D YQT Y+KI+GSVAAPTAGLHFTS +L L GI + +T
Sbjct: 171 LPIPPYLNRD--TEESDKETYQTVYSKIKGSVAAPTAGLHFTSRVLDALQEKGIDLEELT 228
Query: 220 LHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET- 278
LHVGAGTF PVK E+ + H MH+E ++ T + + G ++VGTTS+R LE+
Sbjct: 229 LHVGAGTFKPVKSEEIEGHEMHTEYISVNRST---IKKLIDHDGCAIAVGTTSVRTLESL 285
Query: 279 ------------ATTEDGIINPWSGF------------------------------TNIF 296
AT E+ + W + T I
Sbjct: 286 YHIGVTLAENPYATEEELRVKQWQPYEKYDQIPPVVALQKILGYLDRNGLETLHTSTQII 345
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY ++ V +++NFH P+STLL+LVSAF + +Y +A++H +RF SYGD+SLL
Sbjct: 346 IAPGYNYKIVKAMVTNFHQPQSTLLLLVSAFV-KGNWRTIYDYALAHDFRFLSYGDSSLL 404
Query: 357 FQ 358
Sbjct: 405 IP 406
>gi|262382395|ref|ZP_06075532.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 2_1_33B]
gi|262295273|gb|EEY83204.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 2_1_33B]
Length = 413
Score = 329 bits (843), Expect = 6e-88, Method: Composition-based stats.
Identities = 132/414 (31%), Positives = 198/414 (47%), Gaps = 74/414 (17%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++++++ LP RIA P+ RD ++L++ IS+ + + +L N +VF
Sbjct: 16 RIEDYNYSLPDERIAKFPLPKRDESKLLLYR-----NEEISESIFKHITDYLPQNTLMVF 70
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN------------SWSVYARPSKVI 109
NNT+VI A+L + I + P+ SW+ K
Sbjct: 71 NNTRVIQARLLFQKE-----TGARIEIFCLEPIEPHDYALIFQETRRCSWTCLVGNLKKW 125
Query: 110 KKGDI-LHFFSQDGQSRLEA-TVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIA 167
K+G + F +D L A +T I + + G +P+PPY+
Sbjct: 126 KEGTLSKTIFIKDQPVVLTADKKKSHGDTHLIEFTWDNETYTFADILDAAGVLPIPPYLH 185
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R+ + D YQT Y+KI+GSVAAPTAGLHFT +L+ + + GI VTLHVGAGTF
Sbjct: 186 RE--TEKSDLQTYQTVYSKIKGSVAAPTAGLHFTPEVLADIDARGIGREEVTLHVGAGTF 243
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK + + H MH+E + + + +KS G I++VGTTS+R LE+
Sbjct: 244 KPVKSDTIEGHEMHTEFISVRRSS---IERIKSNLGNIIAVGTTSVRTLESLYYMGVILD 300
Query: 279 ----ATTEDGIINPWSGF-------------------------------TNIFITPGYRF 303
AT+ED ++ W + T I I PGY F
Sbjct: 301 NNPEATSEDLVVKQWMPYDTNNNRLTAERSLQNILDYLDKHDADTLVTATQIIIAPGYEF 360
Query: 304 RAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ V +++NFH PKSTLL+L+SAF K +Y++A+ H +RF SYGD+SLL
Sbjct: 361 KIVKGIVTNFHQPKSTLLLLISAFV-KGNWKSIYEYALEHDFRFLSYGDSSLLL 413
>gi|167765254|ref|ZP_02437367.1| hypothetical protein BACSTE_03642 [Bacteroides stercoris ATCC
43183]
gi|167696882|gb|EDS13461.1| hypothetical protein BACSTE_03642 [Bacteroides stercoris ATCC
43183]
Length = 409
Score = 328 bits (841), Expect = 8e-88, Method: Composition-based stats.
Identities = 132/417 (31%), Positives = 200/417 (47%), Gaps = 76/417 (18%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ EF++ LP RIA P+ RD ++L++ +++ + + LP +L +N ++F
Sbjct: 9 RISEFNYPLPDERIAKFPLPVRDQSKLLLYRHG-----EVTEDIFTSLPDYLPANSLMIF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------------WSVYARPSKVI 109
NNTKVI A+L+ + I + PN W K
Sbjct: 64 NNTKVIQARLHFHKE-----TGALIEVFCLEPIQPNDYALNFQQTEHAAWLCMIGNLKKW 118
Query: 110 KKGDILHFFSQDGQS-RLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIA 167
K+G + + G+ L A T + ++ I + + G +P+PPY+
Sbjct: 119 KEGALKREITVKGKPLTLTAERGACHGTSHWVDFRWNNPEITFADILEVFGELPIPPYLN 178
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R+ D YQT Y+KI+GSVAAPTAGLHFT +L L G+ + +TLHVGAGTF
Sbjct: 179 RE--TQESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALREKGVALEELTLHVGAGTF 236
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK E+ + H MH+E ++ T L + + G+ ++VGTTS+R LE+
Sbjct: 237 KPVKSEEIEGHEMHTEYISVNRST---LEKLVAHEGKAIAVGTTSVRTLESLYHIGVTLL 293
Query: 279 ----ATTEDGIINPWSGF---------------------------------TNIFITPGY 301
AT ED + W + T I I PGY
Sbjct: 294 HNPNATEEDLHVKQWQPYETALETAATPAVDALQAIIAYLDRHHMETLHSSTQIIIAPGY 353
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+R V +++NFH P+STLL+LVSAF + +K+Y +A++H +RF SYGD+SLL
Sbjct: 354 EYRIVKAMVTNFHQPQSTLLLLVSAFL-HGDWRKIYDYALAHDFRFLSYGDSSLLIP 409
>gi|218262646|ref|ZP_03477020.1| hypothetical protein PRABACTJOHN_02699 [Parabacteroides johnsonii
DSM 18315]
gi|218223259|gb|EEC95909.1| hypothetical protein PRABACTJOHN_02699 [Parabacteroides johnsonii
DSM 18315]
Length = 406
Score = 328 bits (841), Expect = 9e-88, Method: Composition-based stats.
Identities = 129/416 (31%), Positives = 198/416 (47%), Gaps = 78/416 (18%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+++FD+ LP RIA P+ RD ++L++ +S+ + + +L +VF
Sbjct: 9 RIEDFDYPLPDERIAKFPLSKRDESKLLLY-----KEGKVSESIFKHITDYLPDGSLMVF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN------------SWSVYARPSKVI 109
NNT+VI A+L + +I V P+ W+ K
Sbjct: 64 NNTRVIQARLLFQKE-----TGAKIEIFCLEPVEPHDYALVFQQTECCRWTCLVGNLKKW 118
Query: 110 KKG---DILHFFSQDGQSRLEATVIDK-WNTGEILLVFSISGIELERQISLVGTIPLPPY 165
K+G + F + L+A + ++ I + + G +P+PPY
Sbjct: 119 KEGVLKKEVQFGDE--TVILKAEKLQTCGDSHLIEFTWDHPTCTFADLLDAAGVLPIPPY 176
Query: 166 IARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAG 225
+ R+ + D YQT Y+KI+GSVAAPTAGLHFT +L+ + + GI +TLHVGAG
Sbjct: 177 LNRE--TEKSDLQTYQTVYSKIKGSVAAPTAGLHFTPEVLAAIDARGIGREELTLHVGAG 234
Query: 226 TFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET------- 278
TF PVK E + H MH+E + + + +K+ G+I++VGTTS+R LE+
Sbjct: 235 TFKPVKSETIEGHEMHTEFISVRRSS---IERIKNNLGKIIAVGTTSVRTLESLYYMGGT 291
Query: 279 ------ATTEDGIINPWSGF-------------------------------TNIFITPGY 301
AT E+ I+ W + T I I PGY
Sbjct: 292 LASNPDATAEELIVKQWMPYDEMNNKLTAGEALQNILDYLDRHQADKLVTATRIIIAPGY 351
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
F+ V +++NFH PKSTLL+L+SAF + K +Y +A+ H +RF SYGD+SLL
Sbjct: 352 EFKIVRGIVTNFHQPKSTLLLLISAFVKGD-WKNIYDYALGHEFRFLSYGDSSLLL 406
>gi|255012412|ref|ZP_05284538.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides sp. 2_1_7]
Length = 404
Score = 328 bits (841), Expect = 9e-88, Method: Composition-based stats.
Identities = 133/414 (32%), Positives = 199/414 (48%), Gaps = 74/414 (17%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++++++ LP RIA P+ RD ++L++ IS+ + + +L N +VF
Sbjct: 7 RIEDYNYSLPDERIAKFPLPKRDESKLLLYR-----NGEISESIFKHITDYLPQNSLMVF 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN------------SWSVYARPSKVI 109
NNT+VI A+L + I + P+ SW+ K
Sbjct: 62 NNTRVIQARLLFQKE-----TGARIEIFCLEPIEPHDYALIFQETRRCSWTCLVGNLKKW 116
Query: 110 KKGDI-LHFFSQDGQSRLEA-TVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIA 167
K+G + F +D L A +T I + + G +P+PPY+
Sbjct: 117 KEGTLSKTIFIKDQPVVLTADKKKSHGDTHLIEFTWDNETYTFADILDAAGVLPIPPYLH 176
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R+ + D YQT Y+KI+GSVAAPTAGLHFTS +L+ + + GI VTLHVGAGTF
Sbjct: 177 RE--TEKSDLQTYQTVYSKIKGSVAAPTAGLHFTSEVLADIDARGIGREEVTLHVGAGTF 234
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK + + H MH+E + + + +KS G I++VGTTS+R LE+
Sbjct: 235 KPVKSDTIEGHEMHTEFISVRRSS---IERIKSNLGNIIAVGTTSVRTLESLYYMGVILD 291
Query: 279 ----ATTEDGIINPWSGF-------------------------------TNIFITPGYRF 303
AT+ED ++ W + T I I PGY F
Sbjct: 292 NNPEATSEDLVVKQWMPYDMNNNRLTAERSLQNILDYLDKHDADTLVTATQIIIAPGYEF 351
Query: 304 RAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ V +++NFH PKSTLL+L+SAF K +Y++A+ H +RF SYGD+SLL
Sbjct: 352 KIVKGIVTNFHQPKSTLLLLISAFV-KGNWKSIYEYALEHDFRFLSYGDSSLLL 404
>gi|53715168|ref|YP_101160.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
fragilis YCH46]
gi|52218033|dbj|BAD50626.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
fragilis YCH46]
Length = 406
Score = 327 bits (840), Expect = 1e-87, Method: Composition-based stats.
Identities = 126/414 (30%), Positives = 186/414 (44%), Gaps = 73/414 (17%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ E+++ LP RIA P+ RD ++L++ S+ + + LP +L + ++F
Sbjct: 9 RISEYNYPLPDERIAKFPLPVRDQSKLLIYRHG-----EASEDVFTSLPEYLPAGSLMIF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------------WSVYARPSKVI 109
NNTKVI A+L+ + I + PN W K
Sbjct: 64 NNTKVIQARLHFRKE-----TGALIEVFCLEPIQPNDYVLNFQQTEHAAWLCMVGNLKKW 118
Query: 110 KKGDILHFFSQDG-QSRLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIA 167
K G + + G L AT + T + + + + + G +P+PPY+
Sbjct: 119 KDGPLCREMTVKGFPITLTATRGECRGTSHWIDFRWDNPEVTFADILEVFGELPIPPYLN 178
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R + D YQT Y+KI+GSVAAPTAGLHFT +L L GI + +TLHVGAGTF
Sbjct: 179 RD--TEESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALTEKGIDLEELTLHVGAGTF 236
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK E+ + H MH+E + + + +VGTTS+R LE+
Sbjct: 237 KPVKSEEIEGHEMHTEYISVSRS---IIKKLIDHDACATAVGTTSVRTLESLYHIGVTLA 293
Query: 279 ----ATTEDGIINPWSGF------------------------------TNIFITPGYRFR 304
AT E + W + T I I PGY ++
Sbjct: 294 NNPEATEEQLHVKQWQPYETECDVRPVVALQKILGYLDRHGMEALHTSTQIIIAPGYDYK 353
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
V +++NFH P+STLL+LVSAF +Y +A+ H +RF SYGD+SLL
Sbjct: 354 IVKAMVTNFHQPQSTLLLLVSAFV-KGNWHTIYDYALGHDFRFLSYGDSSLLIP 406
>gi|150010325|ref|YP_001305068.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Parabacteroides distasonis ATCC 8503]
gi|149938749|gb|ABR45446.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Parabacteroides distasonis ATCC 8503]
Length = 404
Score = 327 bits (840), Expect = 1e-87, Method: Composition-based stats.
Identities = 132/414 (31%), Positives = 199/414 (48%), Gaps = 74/414 (17%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++++++ LP RIA P+ RD ++L++ IS+ + + +L N +VF
Sbjct: 7 RIEDYNYSLPDERIAKFPLPKRDESKLLLYR-----NGEISESIFKHITDYLPQNSLMVF 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN------------SWSVYARPSKVI 109
NNT+VI A+L + I + P+ SW+ K
Sbjct: 62 NNTRVIQARLLFQKE-----TGARIEIFCLEPIEPHDYALIFQETRRCSWTCLVGNLKKW 116
Query: 110 KKGDI-LHFFSQDGQSRLEA-TVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIA 167
K+G + F +D L A +T I ++ + G +P+PPY+
Sbjct: 117 KEGTLSKTIFIKDEPVVLTADKKKSHGDTHLIEFIWDNEAYTFADILDAAGVLPIPPYLH 176
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R+ + D YQT Y+KI+GSVAAPTAGLHFT +L+ + + GI VTLHVGAGTF
Sbjct: 177 RE--TEKSDLQTYQTVYSKIKGSVAAPTAGLHFTPEVLADIDARGIGREEVTLHVGAGTF 234
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK + + H MH+E + + + +KS G I++VGTTS+R LE+
Sbjct: 235 KPVKSDTIEGHEMHTEFISVRRSS---IERIKSNLGNIIAVGTTSVRTLESLYYMGVILD 291
Query: 279 ----ATTEDGIINPWSGF-------------------------------TNIFITPGYRF 303
AT+ED ++ W + T I I PGY F
Sbjct: 292 NNPEATSEDLVVKQWMPYDMNNNRLTAERSLQNILDYLDKHDADTLVTATQIIIAPGYEF 351
Query: 304 RAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ V +++NFH PKSTLL+L+SAF K +Y++A+ H +RF SYGD+SLL
Sbjct: 352 KIVKGIVTNFHQPKSTLLLLISAFV-KGNWKSIYEYALEHDFRFLSYGDSSLLI 404
>gi|313204024|ref|YP_004042681.1| s-adenosylmethionine/tRNA-ribosyltransferase isomerase
[Paludibacter propionicigenes WB4]
gi|312443340|gb|ADQ79696.1| S-adenosylmethionine/tRNA-ribosyltransferase isomerase
[Paludibacter propionicigenes WB4]
Length = 410
Score = 327 bits (840), Expect = 1e-87, Method: Composition-based stats.
Identities = 133/415 (32%), Positives = 197/415 (47%), Gaps = 75/415 (18%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ E+D+ LP RIA P+ RDS++L++ I + S + FL N +V+N
Sbjct: 12 IDEYDYSLPDERIAKYPLAQRDSSKLLLY-----KNGNIGESQFSKIADFLPENALLVYN 66
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSP------------NSWSVYARPSKVIK 110
NT+VI A+L + I ++P W K K
Sbjct: 67 NTRVIQARLIFHK-----NTGARIEVFCLEPLNPADYAQSLGATSECVWKCMVGNLKKWK 121
Query: 111 KGDILHFFSQDGQ-SRLEATVID-KWNTGEILLVFSISGIELERQISLVGTIPLPPYIAR 168
+G + + DG+ EA ++ + NT I + + I + G +P+PPY+ R
Sbjct: 122 EGLLSKTIAFDGKTCTFEAELLHTEGNTHSIHFRWDNADIHFADILEKAGELPIPPYLHR 181
Query: 169 KRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFM 228
K + D YQT Y+KI+GSVAAPTAGLHFT + L I+ +TLHVGAGTF
Sbjct: 182 K--TEESDLTSYQTVYSKIKGSVAAPTAGLHFTPEVFESLKPKLIETEELTLHVGAGTFQ 239
Query: 229 PVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN- 287
PVK D +H MH+EI + T + ++ + G I++VGTTS+R LE+ ++
Sbjct: 240 PVKTRDIAEHHMHTEIISVKRST---IVHLQQKLGNIIAVGTTSVRTLESLYFIGAMLQQ 296
Query: 288 -----------------PWSG---------------------------FTNIFITPGYRF 303
P+ G T I I PGY F
Sbjct: 297 DAVSEIAEKGFHVPQWAPYEGKMEISTYDALQNILDYLDKNKLTTLHADTQIMIKPGYEF 356
Query: 304 RAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+D +++NFH PKSTLL+LVSAF +++Y +A+S+ +RF SYGD+SLL +
Sbjct: 357 HLIDGMVTNFHQPKSTLLLLVSAFVN-GNWREIYHYALSNNFRFLSYGDSSLLMK 410
>gi|218128584|ref|ZP_03457388.1| hypothetical protein BACEGG_00154 [Bacteroides eggerthii DSM 20697]
gi|217989308|gb|EEC55622.1| hypothetical protein BACEGG_00154 [Bacteroides eggerthii DSM 20697]
Length = 409
Score = 327 bits (838), Expect = 2e-87, Method: Composition-based stats.
Identities = 131/417 (31%), Positives = 199/417 (47%), Gaps = 76/417 (18%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ EF++ LP RIA P+ RD ++L++ +S+ + + LP +L ++ ++F
Sbjct: 9 RISEFNYPLPDERIAKFPLPVRDQSKLLLYRHG-----EVSEDVFTSLPDYLPADSLMIF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------------WSVYARPSKVI 109
NNTKVI A+L+ + I + PN W K
Sbjct: 64 NNTKVIQARLHFHKE-----TGALIEVFCLEPIRPNDYALNFQQTEHAAWLCMIGNLKKW 118
Query: 110 KKGDILHFFSQDGQS-RLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIA 167
K+G + G+ L A T + ++ I + + G +P+PPY+
Sbjct: 119 KEGVLKREMVVKGKPLTLTAERGACHGTSHWVDFRWNNPEITFADILEVFGELPIPPYLN 178
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R+ D YQT Y+KI+GSVAAPTAGLHFT +L L G+++ +TLHVGAGTF
Sbjct: 179 RE--TQESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALRKKGVELEELTLHVGAGTF 236
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK E+ + H MH+E + T L + + G+ V+VGTTS+R LE+
Sbjct: 237 KPVKSEEIEGHEMHTEYISVSRNT---LEKLIAHEGKAVAVGTTSVRTLESLYHIGVTLL 293
Query: 279 ----ATTEDGIINPWSGF---------------------------------TNIFITPGY 301
AT E+ + W + T I I PGY
Sbjct: 294 NSPDATEEELHVKQWQPYELTPEMASVSPVDALQAIVAYLNRHNMETLHTSTQIIIAPGY 353
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
++ V +++NFH P+STLL+LVSAF + +K+Y +A++H +RF SYGD+SLL
Sbjct: 354 EYKIVKAIVTNFHQPQSTLLLLVSAFL-RGDWRKIYDYALAHDFRFLSYGDSSLLIP 409
>gi|256839172|ref|ZP_05544682.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Parabacteroides sp. D13]
gi|298374718|ref|ZP_06984676.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 3_1_19]
gi|256740091|gb|EEU53415.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Parabacteroides sp. D13]
gi|298269086|gb|EFI10741.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
sp. 3_1_19]
Length = 404
Score = 327 bits (838), Expect = 2e-87, Method: Composition-based stats.
Identities = 133/414 (32%), Positives = 199/414 (48%), Gaps = 74/414 (17%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++++++ LP RIA P+ RD ++L++ IS+ + + +L N +VF
Sbjct: 7 RIEDYNYSLPDERIAKFPLPKRDESKLLLYR-----NGEISESIFKHITDYLPQNSLMVF 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN------------SWSVYARPSKVI 109
NNT+VI A+L + I + P+ SW+ K
Sbjct: 62 NNTRVIQARLLFQKE-----TGARIEIFCLEPIEPHDYALIFQETRRCSWTCLVGNLKKW 116
Query: 110 KKGDI-LHFFSQDGQSRLEA-TVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIA 167
K+G + F +D L A +T I + + G +P+PPY+
Sbjct: 117 KEGTLSKTIFIKDQPVVLTADKKKSHGDTHLIEFTWDNETYTFADILDAAGVLPIPPYLH 176
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R+ + D YQT Y+KI+GSVAAPTAGLHFTS +L+ + + GI VTLHVGAGTF
Sbjct: 177 RE--TEKSDLQTYQTVYSKIKGSVAAPTAGLHFTSEVLADIDARGIGREEVTLHVGAGTF 234
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK + + H MH+E + + + +KS G I++VGTTS+R LE+
Sbjct: 235 KPVKSDTIEGHEMHTEFISVRRSS---IERIKSNLGNIIAVGTTSVRTLESLYYMGVILD 291
Query: 279 ----ATTEDGIINPWSGF-------------------------------TNIFITPGYRF 303
AT+ED ++ W + T I I PGY F
Sbjct: 292 NNPEATSEDLVVKQWMPYDMNNNRLTAERSLQNILDYLDKHDADTLVTATQIIIAPGYEF 351
Query: 304 RAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ V +++NFH PKSTLL+L+SAF K +Y++A+ H +RF SYGD+SLL
Sbjct: 352 KIVKGIVTNFHQPKSTLLLLISAFV-KGNWKSIYEYALEHDFRFLSYGDSSLLI 404
>gi|260592515|ref|ZP_05857973.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
veroralis F0319]
gi|260535561|gb|EEX18178.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
veroralis F0319]
Length = 423
Score = 326 bits (837), Expect = 3e-87, Method: Composition-based stats.
Identities = 133/430 (30%), Positives = 194/430 (45%), Gaps = 90/430 (20%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++++ LP RIA P+ RD ++L++ +S+ + +LP +L +VFN
Sbjct: 10 ISDYNYPLPDERIAKFPLTERDHSKLLLY-----KHGDVSEDIFYNLPEYLPKGALMVFN 64
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------------WSVYARPSKVIK 110
NTKVI A+++ + I L P W K K
Sbjct: 65 NTKVIQARMHFRKE-----TGALIEVFLMEPAQPTDYELMFQTNHECAWLCMVGNLKKWK 119
Query: 111 KGDILHFFSQDGQSRLEATVIDKWNTGE--------ILLVFSISGIELERQISLVGTIPL 162
+G + F GQ +D+ E I + + I + VG +P+
Sbjct: 120 EGALKRAFEIKGQKLTLTATMDRSKVQEQAGGTNHWIQFEWDNTNISFAEILEAVGELPI 179
Query: 163 PPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHV 222
PPY+ R + D YQT Y+KI+GSVAAPTAGLHFT +L L G+ +TLHV
Sbjct: 180 PPYLN--RATEESDKETYQTVYSKIKGSVAAPTAGLHFTDKVLKALDEHGVDREELTLHV 237
Query: 223 GAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET---- 278
GAGTF PVK + + H MH+E + T L + R ++VGTTS+R LE+
Sbjct: 238 GAGTFKPVKSHEIEGHNMHTEFIIVRRQT---LIKLLKHKCRAIAVGTTSVRTLESLYYM 294
Query: 279 ---------ATTEDGIINPWSGF------------------------------------- 292
AT +D +N W +
Sbjct: 295 GVKLVSNNNATEDDLHVNQWEPYDLPHNSDGLVKVNGKVISVEESIQNLLDYLDRDGLNA 354
Query: 293 ----TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
T I I PGY ++ V L++NFH P+STLL+LVSAF + +K+Y +A+SH +RF
Sbjct: 355 LHSSTQIIIAPGYTYKIVKALITNFHQPQSTLLLLVSAFVKGD-WRKIYDYALSHDFRFL 413
Query: 349 SYGDTSLLFQ 358
SYGD+SLL
Sbjct: 414 SYGDSSLLIP 423
>gi|224438516|ref|ZP_03659436.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter cinaedi CCUG 18818]
gi|313144943|ref|ZP_07807136.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter cinaedi CCUG 18818]
gi|313129974|gb|EFR47591.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter cinaedi CCUG 18818]
Length = 373
Score = 326 bits (837), Expect = 3e-87, Method: Composition-based stats.
Identities = 128/373 (34%), Positives = 187/373 (50%), Gaps = 31/373 (8%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++ +D+ LP S IA P PR+SA+L+V I+ F+ + +VF
Sbjct: 15 LLSSYDYALPQSAIAQSPSIPRESAKLLVYERKSDK---ITHSDFYHFSDFIPKDTLLVF 71
Query: 62 NNTKVITAQLNGVRF-CHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A++ + K + H + +S+ + +K GD L S
Sbjct: 72 NNTKVINARIYAHKLNSQAKPNPKRMEIFFHKAL--DSFRFLVQIKGRVKSGDRLILESH 129
Query: 121 DGQSR-LEATVIDKWNTGEILLVFS-------------ISGIELERQISLVGTIPLPPYI 166
+R + A V++ G ++ F ++ E+ + G IPLPPYI
Sbjct: 130 KAFTRPIIAQVLECCEDGMRIVEFMESTKTHSSQENRILNDKEVFELFNNHGYIPLPPYI 189
Query: 167 ARKRPID--ARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
R D V YQ+ +AK GSVAAPTA LHF+ L L + FVTLH+GA
Sbjct: 190 KRDEANQNLQEDSVFYQSVFAKELGSVAAPTASLHFSKQSLESL-QKSFQTCFVTLHIGA 248
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDG 284
GTF+ V+ ED +H +H E I + +A+A+ K +++ VGTTS R +E
Sbjct: 249 GTFINVESEDIRNHAIHKEYFSISSSSAKAITHAK----KVLCVGTTSARCVEYMMR--- 301
Query: 285 IINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHA 344
G +IF+ PG F+ VD L++NFHLPKSTL+MLVSA G E+ ++Y A+
Sbjct: 302 -YKVLCGECDIFLYPGVEFKRVDYLLTNFHLPKSTLIMLVSAMVGREKCLELYNIALEKG 360
Query: 345 YRFYSYGDTSLLF 357
Y+FYSYGD L+
Sbjct: 361 YKFYSYGDGILIL 373
>gi|299148283|ref|ZP_07041345.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides sp. 3_1_23]
gi|298513044|gb|EFI36931.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides sp. 3_1_23]
Length = 406
Score = 326 bits (837), Expect = 3e-87, Method: Composition-based stats.
Identities = 127/414 (30%), Positives = 191/414 (46%), Gaps = 73/414 (17%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ E+ + L RIA P+ RD ++L++ +S+ + + LP +L ++F
Sbjct: 9 HISEYSYPLLDERIAKFPLPTRDQSKLLIYRRG-----EVSEDVFTSLPEYLPQGSLMIF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------------WSVYARPSKVI 109
NNTKVI A+L+ + I + PN W K
Sbjct: 64 NNTKVIQARLHFRKE-----TGALIEVFCLEPIQPNDYVLNFQQTAHAAWLCMIGNLKKW 118
Query: 110 KKGDILHFFSQDG-QSRLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIA 167
K G + + G L AT + T + + + + + G +P+PPY+
Sbjct: 119 KDGQLKREMTVKGFPITLTATRGECKGTSHWVDFAWDNPEVTFADILEVFGELPIPPYLN 178
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R + D YQT Y+KI+GSVAAPTAGLHFT +L L GI + +TLHVGAGTF
Sbjct: 179 RD--TEESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALQEKGIDLEELTLHVGAGTF 236
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK E+ + H MH+E ++ T + + G ++VGTTS+R LE+
Sbjct: 237 KPVKSEEIEGHEMHTEYISVNRST---IKKLIDHDGCAIAVGTTSVRTLESLYHIGVTLA 293
Query: 279 ----ATTEDGIINPWSGF------------------------------TNIFITPGYRFR 304
AT E+ + W + T I I PGY ++
Sbjct: 294 ENPYATEEELRVKQWQPYEKYDQIPPVVALQKILGYLDRNGLETLHTSTQIIIAPGYNYK 353
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
V +++NFH P+STLL+LVSAF + +Y +A++H +RF SYGD+SLL
Sbjct: 354 IVKAMVTNFHQPQSTLLLLVSAFV-KGNWRTIYDYALAHDFRFLSYGDSSLLIP 406
>gi|329960192|ref|ZP_08298634.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides fluxus YIT 12057]
gi|328532865|gb|EGF59642.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides fluxus YIT 12057]
Length = 409
Score = 326 bits (837), Expect = 3e-87, Method: Composition-based stats.
Identities = 133/417 (31%), Positives = 200/417 (47%), Gaps = 76/417 (18%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ EF++ LP RIA P+ RD ++L++ +S+ + + LP +L+S ++F
Sbjct: 9 HISEFNYPLPDKRIAKFPLPLRDQSKLLIYRHG-----EVSEDVFTSLPGYLSSGSLMIF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------------WSVYARPSKVI 109
NNTKVI A+L+ + I + PN W K
Sbjct: 64 NNTKVIQARLHFRKE-----TGALIEVFCLEPIQPNDYVLNFQQTEHAAWLCMIGNLKKW 118
Query: 110 KKGDILHFFSQDGQS-RLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIA 167
K+G ++ + G+ L A + T + ++ I + + G +P+PPY+
Sbjct: 119 KEGVLIREMTVKGKPLTLTAERGECRGTSHWVDFRWNNPEITFADILEVFGELPIPPYLN 178
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R+ D YQT Y+KI+GSVAAPTAGLHFT +L L G+ + +TLHVGAGTF
Sbjct: 179 RE--TQESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALKEKGVDLEELTLHVGAGTF 236
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK E+ + H MH+E + T L + + G+ ++VGTTS+R LE+
Sbjct: 237 KPVKSEEIEGHEMHTEYISVTRNT---LKKLIAHEGKAIAVGTTSVRTLESLYHIGVTLY 293
Query: 279 ----ATTEDGIINPWSGF---------------------------------TNIFITPGY 301
AT E+ + W + T I I PGY
Sbjct: 294 NTPDATEEELHVRQWQPYEMTGESTAIPATDALQAILRYLDRHGMETLHTSTQIIIAPGY 353
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+R V +++NFH P+STLL+LVSAF + KK+Y +A+ H +RF SYGD+SLL
Sbjct: 354 EYRIVKAMVTNFHQPQSTLLLLVSAFV-HGDWKKIYDYALGHDFRFLSYGDSSLLIP 409
>gi|330996657|ref|ZP_08320535.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Paraprevotella xylaniphila YIT 11841]
gi|329572729|gb|EGG54362.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Paraprevotella xylaniphila YIT 11841]
Length = 431
Score = 326 bits (836), Expect = 3e-87, Method: Composition-based stats.
Identities = 134/428 (31%), Positives = 197/428 (46%), Gaps = 87/428 (20%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+K+F+++LP RIA P+ RD ++L+V + + + LP +L +VF
Sbjct: 20 QIKDFNYNLPEERIAKFPLTERDQSKLLVYRHGT-----VGEDTFTSLPDYLPQGALMVF 74
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN------------SWSVYARPSKVI 109
NNTKVI A+L+ + I V P+ SW K
Sbjct: 75 NNTKVIQARLHFHK-----DTGALIEVFCLEPVRPHDYALMFQQTGRCSWLCLVGNLKKW 129
Query: 110 KKGDILHFFSQDGQS-RLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIA 167
K G + G+S L+AT + T + + + VG +P+PPY+
Sbjct: 130 KSGSLSCPVEIGGRSITLKATRGENRGTSHWIDFEWDDEQTTWAEILEAVGELPIPPYLN 189
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R+ D YQT Y+KI+GSVAAPTAGLHFT +L+ L + GI VTLHVGAGTF
Sbjct: 190 RE--TQESDKTTYQTVYSKIKGSVAAPTAGLHFTERVLADLDAHGIDREEVTLHVGAGTF 247
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK E+ H MH+E + T + + + GG ++VGTTS+R LE+
Sbjct: 248 KPVKSEEIAGHEMHTEYICVHRST---IEKLLAHGGACIAVGTTSVRTLESLYYIGVALN 304
Query: 279 ----ATTEDGIINPWSGF------------------------------------------ 292
A+ E+ + W +
Sbjct: 305 GNPDASEEELHVPQWMPYEYAARTRPVGSPDNGHPEALTTLQALQNVLDYLDRHGLTALH 364
Query: 293 --TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
T I I PGY + V ++++NFH P+STLL+LVSAF + + +Y +A++H +RF SY
Sbjct: 365 TSTQIIIAPGYEYHIVRMMVTNFHQPQSTLLLLVSAFV-HGDWRTIYDYALAHDFRFLSY 423
Query: 351 GDTSLLFQ 358
GD+SLL
Sbjct: 424 GDSSLLIP 431
>gi|325282154|ref|YP_004254696.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Odoribacter
splanchnicus DSM 20712]
gi|324313963|gb|ADY34516.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Odoribacter
splanchnicus DSM 20712]
Length = 408
Score = 326 bits (836), Expect = 4e-87, Method: Composition-based stats.
Identities = 137/412 (33%), Positives = 197/412 (47%), Gaps = 69/412 (16%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
++++ ++LP RIA P+ R++++L++ I + S++ L + +VF
Sbjct: 12 RIEDYTYNLPDERIAKFPLAEREASKLLIYRGER-----IEESRFSEVRHLLRAGQMLVF 66
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMR------------VSPNSWSVYARPSKVI 109
NNTKVI A+L + I WS K
Sbjct: 67 NNTKVIHARLFFRKA-----TGAVIEVFCLEPYLPVDYAQNFAARDSCEWSCMVGNLKKW 121
Query: 110 KKGDI-LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIAR 168
K+G I F + RL A + + I+ G+ + G IP+PPY+ R
Sbjct: 122 KEGSIACDFTYGEATYRLTAEKVRQQEGELIIRFSWTGGLSFSEVLEGCGRIPIPPYLNR 181
Query: 169 KRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFM 228
+ +A D V YQT Y+K +GSVAAPTAGLHFT +L+ L G+ V +TLHVGAGTF
Sbjct: 182 E--SEASDEVRYQTVYSKEEGSVAAPTAGLHFTRAILNDLKEKGVHVRELTLHVGAGTFR 239
Query: 229 PVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET---------A 279
PVK E DH MH+E I + +K + G IV+VGTTS+R LE+ A
Sbjct: 240 PVKAETIGDHDMHTEHLVISRE---LVEQLKEKTGDIVAVGTTSVRTLESLYWMGVKRLA 296
Query: 280 TTED----GIINPW---------------SGF------------TNIFITPGYRFRAVDI 308
ED G + G+ T I I PGYR+R +D
Sbjct: 297 GQEDFFTLGQWEAYTLPQDYSLREAMEALCGWFDTACQELLKARTTIIIVPGYRYRVIDA 356
Query: 309 LMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
+ +NFH P+STLL+LV A G + K+Y +A++H +RF SYGD+SLL K+
Sbjct: 357 MFTNFHQPQSTLLLLVGAAVGED-WHKIYDYALTHDFRFLSYGDSSLLEVKK 407
>gi|116329699|ref|YP_799418.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase (queuosine
synthetase) [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116332583|ref|YP_802300.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase (queuosine
synthetase) [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116122592|gb|ABJ80485.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase (queuosine
synthetase) [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116127450|gb|ABJ77542.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase (queuosine
synthetase) [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 347
Score = 326 bits (835), Expect = 4e-87, Method: Composition-based stats.
Identities = 132/359 (36%), Positives = 189/359 (52%), Gaps = 18/359 (5%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+KEF+F L RIA P RD +RLMV+ N+ + S+ +L ++L D +V N
Sbjct: 6 LKEFEFTLSEERIARYPAANRDESRLMVLDVNVGN--IFSESSFKNLVSYLKEGDVLVAN 63
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKV ++ + + T+ + W R SK +K G L S +
Sbjct: 64 HTKVSKRRVY-------LKTQIRTHETMFLEEKELLWKCKIRNSKKLKVGTKL---SDEK 113
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
R+ TV K GE + + ++ E +G IP+PPY KR D +D + YQT
Sbjct: 114 TQRISFTVEKK--EGEFVFLKPEQTLQ-EEDFQQIGEIPIPPYF--KRNPDPKDEIRYQT 168
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
+AK GSVAAPTAGLHF+ ++ L I+ + L VG GTF P+ E+ + +H
Sbjct: 169 LFAKTPGSVAAPTAGLHFSESIFQTLKEKKIRFCTLELKVGYGTFQPLTEENFQNQKLHR 228
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-EDGIINPWSGFTNIFITPGY 301
E F++ + + LN K G RI S+GTT+LR LE+A G T +FI P
Sbjct: 229 EEFFLEKSSTEILNLAKKEGRRIFSIGTTTLRALESAYDYATNSFRSGRGATELFIQPED 288
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
R ++ + L++NFHLP S+LL+LVSAF G E K YQ AI +RF+SYGD L+ KR
Sbjct: 289 RLKSCECLITNFHLPSSSLLLLVSAFAGKELVLKAYQKAIQEKFRFHSYGDAMLILGKR 347
>gi|288800160|ref|ZP_06405619.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
sp. oral taxon 299 str. F0039]
gi|288333408|gb|EFC71887.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
sp. oral taxon 299 str. F0039]
Length = 404
Score = 326 bits (835), Expect = 5e-87, Method: Composition-based stats.
Identities = 126/414 (30%), Positives = 195/414 (47%), Gaps = 75/414 (18%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+K+++++LP RIA P RD +++++ + I + + ++ FL +VFN
Sbjct: 8 IKDYNYELPDERIAKFPKSERDHSKILIYNKGD-----IVEDIFYNIVNFLPEKALMVFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSP------------NSWSVYARPSKVIK 110
NTKVI A+L+ + + I L P W K K
Sbjct: 63 NTKVIQARLHFQK-----QSGAHIEIFLLEPAEPFDYELMFQRKEQCVWVCMIGNLKKWK 117
Query: 111 KG---DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIA 167
+G + ++E + + ++ L + + + I ++G +P+PPY+
Sbjct: 118 EGVLTKEIEINGHSVTIKVE-RLEQVGASHKVCLSWDDTSLSFAELIDVIGELPIPPYLN 176
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R D YQT Y+KI+GSVAAPTAGLHFT ++LS + GI +TLHVGAGTF
Sbjct: 177 RD--TQESDKTTYQTVYSKIKGSVAAPTAGLHFTKDVLSEIDKKGIVREELTLHVGAGTF 234
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT------- 280
PVK E +H MH+E + T L +++ ++VGTTS+R LE+
Sbjct: 235 KPVKSELISEHDMHTEYISVSKST---LETLRKFNASAIAVGTTSVRTLESLYYIGLKLH 291
Query: 281 ------TEDGIINPWSGF------------------------------TNIFITPGYRFR 304
E+ + W + T I I PGY ++
Sbjct: 292 KNPHLIDEELAVKQWEPYEQTTNVTALEAINAIIKYLDENDLDTLHSSTQIMIAPGYEYK 351
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
V +L++NFH P+STLL+LVSAF G + K+Y +A+ H +RF SYGD+SLL
Sbjct: 352 IVKMLVTNFHQPQSTLLLLVSAFIG-DNWHKVYNYALEHDFRFLSYGDSSLLIP 404
>gi|42523695|ref|NP_969075.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bdellovibrio bacteriovorus HD100]
gi|39575902|emb|CAE80068.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bdellovibrio bacteriovorus HD100]
Length = 346
Score = 325 bits (834), Expect = 6e-87, Method: Composition-based stats.
Identities = 128/360 (35%), Positives = 182/360 (50%), Gaps = 37/360 (10%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + + DF P IA PV P +R+M V L + + DL + + + D +V
Sbjct: 1 MKLTDLDFSYPEELIATSPVRP---SRVMWVEGELEPQEI----SLQDLLSRIPAGDVLV 53
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ ++ ++ +++ W V PSK K G +L
Sbjct: 54 VNNTRVLKRRVFS----------GDVEILFLKQINATDWEVL-FPSKKFKIGSVLELPLG 102
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPID---ARDY 177
++ T+ K + L +S E V +PLPPYI + R D
Sbjct: 103 -----VQMTLQQKGRPQTVRLSQEVS----EDYFQKVAELPLPPYIQKAREQRHTVDADE 153
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
YQT + K GS AAPTA LHF++ + L S G+KV VTLHVG GTF+PV ED +D
Sbjct: 154 SWYQTAWNKNPGSFAAPTASLHFSAEDIEGLKSRGVKVLEVTLHVGLGTFLPVTAEDLND 213
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINP-----WSGF 292
H MH E I A T A+ K+ G +I S+GTT+ R LE+A G++ +SGF
Sbjct: 214 HDMHEEYVEISAATWSAVQKAKAEGRKIWSLGTTTSRSLESAA--QGLLGAMSETGFSGF 271
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T + I PGY+++ VD LM+NFH P+STL+ LV+ F + K YQ AI +R +SYGD
Sbjct: 272 TKLLIQPGYQYKVVDCLMTNFHQPQSTLVALVAGFSSLNRVKACYQWAIERKFRLFSYGD 331
>gi|329957188|ref|ZP_08297755.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides clarus YIT 12056]
gi|328523456|gb|EGF50555.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides clarus YIT 12056]
Length = 409
Score = 325 bits (834), Expect = 6e-87, Method: Composition-based stats.
Identities = 133/417 (31%), Positives = 199/417 (47%), Gaps = 76/417 (18%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ EF++ LP RIA P+ RD ++L++ +S+ + + LP +L +N ++F
Sbjct: 9 RISEFNYPLPDERIAKFPLPVRDQSKLLLYRHG-----EVSEDVFTSLPDYLPANSLMIF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------------WSVYARPSKVI 109
NNTKVI A+L+ + I + PN W K
Sbjct: 64 NNTKVIQARLHFHKE-----TGALIEVFCLEPIRPNDYALNFQQTEHAAWLCMIGNLKKW 118
Query: 110 KKGDILHFFSQDGQS-RLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIA 167
K+G + G+ L A T + ++ I + + G +P+PPY+
Sbjct: 119 KEGTLKREMVVKGKPLTLTAERGACHGTSHWVDFRWNNPEITFADILEVFGELPIPPYLN 178
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R+ D YQT Y+KI+GSVAAPTAGLHFT +L L G++ +TLHVGAGTF
Sbjct: 179 RE--TQESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALRGKGVEPEELTLHVGAGTF 236
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK E+ + H MH+E ++ T L + + G+ ++VGTTS+R LE+
Sbjct: 237 KPVKSEEIEGHEMHTEYISVNRST---LEKLVAHEGKAIAVGTTSVRTLESLYHIGVTLL 293
Query: 279 ----ATTEDGIINPWSGF---------------------------------TNIFITPGY 301
AT ED + W + T I I PGY
Sbjct: 294 NNPDATEEDLHVKQWQPYEMTPETAATPAVDALRAIIAYLDRHHMETLHTSTQIIIAPGY 353
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+R V +++NFH P+STLL+LVSAF + +K+Y +A++H +RF SYGD+SLL
Sbjct: 354 EYRIVKAMVTNFHQPQSTLLLLVSAFL-HGDWRKIYDYALAHDFRFLSYGDSSLLIP 409
>gi|313149103|ref|ZP_07811296.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
fragilis 3_1_12]
gi|313137870|gb|EFR55230.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacteroides
fragilis 3_1_12]
Length = 406
Score = 325 bits (833), Expect = 8e-87, Method: Composition-based stats.
Identities = 126/422 (29%), Positives = 189/422 (44%), Gaps = 89/422 (21%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ E+++ LP RIA P+ RD ++L++ +S+ + + LP L + ++F
Sbjct: 9 RISEYNYSLPDERIAKFPLPMRDQSKLLIYRHG-----EVSEDVFTSLPEHLPAGSLMIF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------------WSVYARPSKVI 109
NNTKVI A+L+ + I + PN W K
Sbjct: 64 NNTKVIQARLHFRKE-----TGALIEVFCLEPIQPNDYVLNFQQTEHAAWLCMIGNLKKW 118
Query: 110 KKGDI----------LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGT 159
K G + + + G+ R + ID + + + + G
Sbjct: 119 KDGPLRREMTVKGFPITLTATRGECRGTSHWID--------FNWDNPEVTFADILEVFGE 170
Query: 160 IPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVT 219
+P+PPY+ R + D YQT Y+KI+GSVAAPTAGLHFT +L L GI + +T
Sbjct: 171 LPIPPYLNRD--TEESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALTEKGIDLEELT 228
Query: 220 LHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET- 278
LHVGAGTF PVK E+ + H MH+E + + + ++VGTTS+R LE+
Sbjct: 229 LHVGAGTFKPVKSEEIEGHEMHTEYISVSRS---IIKKLIDHDACAIAVGTTSVRTLESL 285
Query: 279 ------------ATTEDGIINPWSGF------------------------------TNIF 296
AT E + W + T I
Sbjct: 286 YHIGVTLANNPEATEEQLRVKQWQPYETECDVRPVVALQKILGYLDRHGMEALHTSTQII 345
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY ++ V +++NFH P+STLL+LVSAF + +Y +A+SH +RF SYGD+SLL
Sbjct: 346 IAPGYEYKIVKAMVTNFHQPQSTLLLLVSAFV-KGNWRTIYDYALSHDFRFLSYGDSSLL 404
Query: 357 FQ 358
Sbjct: 405 IP 406
>gi|255011292|ref|ZP_05283418.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Bacteroides fragilis 3_1_12]
Length = 407
Score = 325 bits (833), Expect = 8e-87, Method: Composition-based stats.
Identities = 126/422 (29%), Positives = 189/422 (44%), Gaps = 89/422 (21%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ E+++ LP RIA P+ RD ++L++ +S+ + + LP L + ++F
Sbjct: 10 RISEYNYSLPDERIAKFPLPMRDQSKLLIYRHG-----EVSEDVFTSLPEHLPAGSLMIF 64
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------------WSVYARPSKVI 109
NNTKVI A+L+ + I + PN W K
Sbjct: 65 NNTKVIQARLHFRKE-----TGALIEVFCLEPIQPNDYVLNFQQTEHAAWLCMIGNLKKW 119
Query: 110 KKGDI----------LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGT 159
K G + + + G+ R + ID + + + + G
Sbjct: 120 KDGPLRREMTVKGFPITLTATRGECRGTSHWID--------FNWDNPEVTFADILEVFGE 171
Query: 160 IPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVT 219
+P+PPY+ R + D YQT Y+KI+GSVAAPTAGLHFT +L L GI + +T
Sbjct: 172 LPIPPYLNRD--TEESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALTEKGIDLEELT 229
Query: 220 LHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET- 278
LHVGAGTF PVK E+ + H MH+E + + + ++VGTTS+R LE+
Sbjct: 230 LHVGAGTFKPVKSEEIEGHEMHTEYISVSRS---IIKKLIDHDACAIAVGTTSVRTLESL 286
Query: 279 ------------ATTEDGIINPWSGF------------------------------TNIF 296
AT E + W + T I
Sbjct: 287 YHIGVTLANNPEATEEQLRVKQWQPYETECDVRPVVALQKILGYLDRHGMEALHTSTQII 346
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I PGY ++ V +++NFH P+STLL+LVSAF + +Y +A+SH +RF SYGD+SLL
Sbjct: 347 IAPGYEYKIVKAMVTNFHQPQSTLLLLVSAFV-KGNWRTIYDYALSHDFRFLSYGDSSLL 405
Query: 357 FQ 358
Sbjct: 406 IP 407
>gi|254442307|ref|ZP_05055783.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Verrucomicrobiae bacterium DG1235]
gi|198256615|gb|EDY80923.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Verrucomicrobiae bacterium DG1235]
Length = 357
Score = 325 bits (833), Expect = 8e-87, Method: Composition-based stats.
Identities = 140/372 (37%), Positives = 188/372 (50%), Gaps = 30/372 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M F + LP RIA P RD++RL+VVH I SDLP FL + D+I
Sbjct: 1 MDSSLFAYHLPDERIAQEPASARDASRLLVVHR---SERRIEHRRFSDLPEFLGARDSIF 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN--SWSVYARPSKVIKKGDILHFF 118
NN +V+ A+L R + + C L S + W RP K + G F
Sbjct: 58 RNNARVLPARLYAQR-----QTGGAVECLLLRPASNDGLEWWTLIRPGKKLPVGST---F 109
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSIS-GIELERQISLVGTIPLPPYIARKRPIDARDY 177
++DG A+V++K E + FS+ + +G +PLPPYIAR + D D
Sbjct: 110 ARDG--FFSASVVEKNEKAEYRVRFSLERHASVPALADELGKMPLPPYIARDKSDDRDDS 167
Query: 178 --VDYQTTYAKIQGSVAA--PTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
YQT YA SVAA PTAGLHFT ++ +L + G + + LHVG GTF P++ E
Sbjct: 168 DKERYQTVYAAADKSVAAAAPTAGLHFTPAIVEKLAAQGATFHDLALHVGMGTFKPIQCE 227
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWS--G 291
+DH +H EI I T A+ + R V VGTTS+R +E + I + G
Sbjct: 228 RVEDHQIHREIYEIPESTQNAIRTP--NSRRRVCVGTTSVRSIEDYLAKSTTIQTGNFVG 285
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFC------GIEETKKMYQHAISHAY 345
+IFI P FR VD L++NFH P STLL LVS+F GI K++Y AI+ Y
Sbjct: 286 EADIFIYPPRDFRGVDALITNFHQPHSTLLCLVSSFLDPNGTDGIAWLKEIYAEAINMKY 345
Query: 346 RFYSYGDTSLLF 357
RF SYGD L+
Sbjct: 346 RFLSYGDAMLIL 357
>gi|317475610|ref|ZP_07934871.1| queuosine biosynthesis protein [Bacteroides eggerthii 1_2_48FAA]
gi|316908180|gb|EFV29873.1| queuosine biosynthesis protein [Bacteroides eggerthii 1_2_48FAA]
Length = 409
Score = 325 bits (833), Expect = 8e-87, Method: Composition-based stats.
Identities = 130/417 (31%), Positives = 198/417 (47%), Gaps = 76/417 (18%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ EF++ LP RIA P+ RD ++L++ + + + + LP +L ++ ++F
Sbjct: 9 RISEFNYLLPDERIAKFPLPVRDQSKLLLYRHG-----EVFEDVFTSLPDYLPADSLMIF 63
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------------WSVYARPSKVI 109
NNTKVI A+L+ + I + PN W K
Sbjct: 64 NNTKVIQARLHFHKE-----TGALIEVFCLEPIRPNDYALNFQQTEHAAWLCMIGNLKKW 118
Query: 110 KKGDILHFFSQDGQS-RLEATVIDKWNTGEIL-LVFSISGIELERQISLVGTIPLPPYIA 167
K+G + G+ L A T + ++ I + + G +P+PPY+
Sbjct: 119 KEGVLKREMVVKGKPLTLTAERGACHGTSHWVDFRWNNPEITFADILEVFGELPIPPYLN 178
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R+ D YQT Y+KI+GSVAAPTAGLHFT +L L G+++ +TLHVGAGTF
Sbjct: 179 RE--TQESDKETYQTVYSKIKGSVAAPTAGLHFTPRVLDALRKKGVELEELTLHVGAGTF 236
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK E+ + H MH+E + T L + + G+ V+VGTTS+R LE+
Sbjct: 237 KPVKSEEIEGHEMHTEYISVSRNT---LEKLIAHEGKAVAVGTTSVRTLESLYHIGVTLL 293
Query: 279 ----ATTEDGIINPWSGF---------------------------------TNIFITPGY 301
AT E+ + W + T I I PGY
Sbjct: 294 NSPDATEEELHVKQWQPYELTPEMASVSPVDALQAIVAYLNRHNMETLHTSTQIIIAPGY 353
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
++ V +++NFH P+STLL+LVSAF + +K+Y +A++H +RF SYGD+SLL
Sbjct: 354 EYKIVKAIVTNFHQPQSTLLLLVSAFL-RGDWRKIYDYALAHDFRFLSYGDSSLLIP 409
>gi|281420090|ref|ZP_06251089.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
copri DSM 18205]
gi|281405890|gb|EFB36570.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
copri DSM 18205]
Length = 424
Score = 324 bits (832), Expect = 1e-86, Method: Composition-based stats.
Identities = 133/434 (30%), Positives = 198/434 (45%), Gaps = 93/434 (21%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ ++++DLP RIA P+ RD ++L+V +SD + LP +L ++F
Sbjct: 7 KISDYNYDLPDERIAKFPIAQRDHSKLLVY-----KHGEVSDDVFHHLPTYLPQGALMIF 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP------------NSWSVYARPSKVI 109
NNTKVI A+L+ + I L P SW K
Sbjct: 62 NNTKVIQARLHFRKE-----TGALIEVFLMEPAEPTDYELMFQTTGHCSWLCMIGNLKKW 116
Query: 110 KKGDILHFFSQDGQSRLEATVIDKWNTGE----------------ILLVFSISGIELERQ 153
K+G + F G + + + + + + +
Sbjct: 117 KEGSLKRDFEIKGHKLTLSATMRRGDALGSEAQKMVAKGGGTNYWVDFDWDNDKVSFAEI 176
Query: 154 ISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGI 213
+ VG +P+PPY+ RK + D YQT Y+K++GSVAAPTAGLHFT +L L + GI
Sbjct: 177 LEAVGELPIPPYLNRK--TEESDKTTYQTVYSKVKGSVAAPTAGLHFTDAVLKDLDAHGI 234
Query: 214 KVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSL 273
VTLHVGAGTF PVK + + H MH+E + ++L + R+++VGTTS+
Sbjct: 235 DREEVTLHVGAGTFKPVKSLEIEGHQMHTEYIVVHR---RSLEKLIKHECRVIAVGTTSV 291
Query: 274 RLLET-------------ATTEDGIINPWSGF---------------------------- 292
R +E+ A ED +N W +
Sbjct: 292 RTIESLYYMGVHLLKHPEANEEDLHVNQWDPYELSEDGNLVDGITPMQAIQAIIDYLDRN 351
Query: 293 --------TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHA 344
T I I PGY+++ V +L++NFH P+STLL+LVSAF + KK+Y +A+SH
Sbjct: 352 GLEALHSSTQIIIAPGYQYKIVKMLVTNFHQPQSTLLLLVSAFLKGD-WKKVYDYALSHD 410
Query: 345 YRFYSYGDTSLLFQ 358
+RF SYGD+SLL
Sbjct: 411 FRFLSYGDSSLLIP 424
>gi|288928463|ref|ZP_06422310.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella sp. oral taxon 317 str. F0108]
gi|288331297|gb|EFC69881.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella sp. oral taxon 317 str. F0108]
Length = 407
Score = 324 bits (832), Expect = 1e-86, Method: Composition-based stats.
Identities = 131/417 (31%), Positives = 194/417 (46%), Gaps = 76/417 (18%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+K++++DLP RIA P+ RD ++L+V + +S S++ +L +VF
Sbjct: 7 RIKDYNYDLPDERIAKFPLPQRDKSKLLVYNHG-----EVSQDEFSNITRYLPQGALMVF 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP------------NSWSVYARPSKVI 109
NNTKVI A+L+ + I L P SW K
Sbjct: 62 NNTKVIQARLHFRKE-----TGSLIEIFLLEPALPADYEQMFQTTDACSWYCMVGNLKKW 116
Query: 110 KKG---DILHFFSQDGQSRLEATVIDKWNTG-EILLVFSISGIELERQISLVGTIPLPPY 165
K G + Q +L A T +I ++ + + + G +P+PPY
Sbjct: 117 KGGPLTTTVEIAGQPAAVQLTAERDMSCETALKIDFKWTGNKLSFAELLDKAGELPIPPY 176
Query: 166 IARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAG 225
+ R D YQT Y+KI+GSVAAPTAGLHFT +L+ + GI +TLHVGAG
Sbjct: 177 LNRN--TQESDKTTYQTVYSKIKGSVAAPTAGLHFTQRVLADIDQHGIDREELTLHVGAG 234
Query: 226 TFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET------- 278
TF PVK E+ + H MH+E I T L + + ++VGTTS+R LE+
Sbjct: 235 TFKPVKSEEIEGHSMHTEYVCIRRTT---LEKLLQHNCQAIAVGTTSVRTLESLYYMGCK 291
Query: 279 ------ATTEDGIINPWSGF-------------------------------TNIFITPGY 301
+ E +N W + T I I PGY
Sbjct: 292 VKANPNVSLEQLHVNQWEPYEPTPTNITPTEAIGELIAYMDRNNLPSLHSSTQIIIAPGY 351
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+++ V L++NFH P+STLL+LVSAF G + K +Y++A+ + +RF SYGD+S+L
Sbjct: 352 QYKIVKRLVTNFHQPQSTLLLLVSAFVGGD-WKSIYRYALDNDFRFLSYGDSSILIP 407
>gi|307565267|ref|ZP_07627760.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella amnii CRIS 21A-A]
gi|307345936|gb|EFN91280.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella amnii CRIS 21A-A]
Length = 423
Score = 324 bits (830), Expect = 1e-86, Method: Composition-based stats.
Identities = 130/430 (30%), Positives = 193/430 (44%), Gaps = 90/430 (20%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++++ LP SRIA P+ RD+++L++ I++ + +LP +L S +V N
Sbjct: 10 ISDYNYHLPDSRIAKYPLAKRDNSKLLLY-----KQGKITEDVFYNLPKYLPSGGLMVCN 64
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSP------------NSWSVYARPSKVIK 110
NTKVI A+++ + I L P SW K K
Sbjct: 65 NTKVIQARIHFRKE-----TGALIEIFLLEPADPVDYELMFQTTHNCSWLCMVGNLKKWK 119
Query: 111 KGDILHFFSQDGQSRLEATVIDKWNTGEIL--------LVFSISGIELERQISLVGTIPL 162
G + F G+ ++K T L + + + +VG +P+
Sbjct: 120 DGKLKRKFDIKGEKLTLIASLNKEKTLNTLGGTNHWIDFTWDNENVSFAEILEIVGELPI 179
Query: 163 PPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHV 222
PPY+ R + D YQT Y+KI+GSVAAPTAGLHFT +L + GI +TLHV
Sbjct: 180 PPYLNRD--TEESDKETYQTVYSKIKGSVAAPTAGLHFTPEVLKAIDECGIVRDELTLHV 237
Query: 223 GAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET---- 278
GAGTF PVK E+ + H MHSE + T L + ++VGTTS+R LE+
Sbjct: 238 GAGTFKPVKSEEIEGHNMHSEYVVVQRHT---LEQLLLHDCSAIAVGTTSVRTLESLYYM 294
Query: 279 ---------ATTEDGIINPWSGF------------------------------------- 292
A+ D I W +
Sbjct: 295 GIHLEENPNASEADLHIKQWEPYDLPHNEEGLVIIKGVAITVRKAIENILFYLKKDNLQA 354
Query: 293 ----TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
T I I PGY ++ V L++NFH P+STL++LVSAF + + +Y +A++H +RF
Sbjct: 355 LHSSTQIIIAPGYTYKIVKALITNFHQPQSTLILLVSAFVKGD-WRNIYDYALNHDFRFL 413
Query: 349 SYGDTSLLFQ 358
SYGD+SLL
Sbjct: 414 SYGDSSLLIP 423
>gi|303235656|ref|ZP_07322263.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella disiens FB035-09AN]
gi|302484103|gb|EFL47091.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella disiens FB035-09AN]
Length = 430
Score = 324 bits (830), Expect = 2e-86, Method: Composition-based stats.
Identities = 130/431 (30%), Positives = 200/431 (46%), Gaps = 90/431 (20%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ ++D+ LP RIA P+ RD ++L++ +S+ + +LP +L + +VF
Sbjct: 16 KISDYDYPLPDERIAKFPLNQRDQSKLLLY-----KHGEVSEDVFCNLPKYLPNGALMVF 70
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP------------NSWSVYARPSKVI 109
NNTKVI A+++ + I L P SW K
Sbjct: 71 NNTKVIQARMHFRKE-----TGALIEIFLMEPAQPTDYELMFQTNSECSWLCMIGNLKKW 125
Query: 110 KKGDILHFFSQDGQSRLEATVIDKWNTGE--------ILLVFSISGIELERQISLVGTIP 161
K+G++ F +G + +D+ + + + + + + VG +P
Sbjct: 126 KEGELRRSFEINGNKLVLTVSVDRSKASDLAGGTNHWVDFKWDNAKVSFAEILEAVGELP 185
Query: 162 LPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLH 221
+PPY+ R+ D YQT Y+KI+GSVAAPTAGLHFT +L +L GI +TLH
Sbjct: 186 IPPYLNRE--TQESDKETYQTVYSKIKGSVAAPTAGLHFTDAVLEQLDKAGILRDELTLH 243
Query: 222 VGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--- 278
VGAGTF PVK + + H MH+E + T L ++ S ++VGTTS+R LE+
Sbjct: 244 VGAGTFKPVKSSEIEGHNMHTEYIVVHRHT---LENLLSHDCSAIAVGTTSVRTLESLYY 300
Query: 279 ----------ATTEDGIINPWSGF------------------------------------ 292
AT +D +N W +
Sbjct: 301 MGVKLERNANATEDDLHVNQWEPYDENVTEEGFIKVNGQVVTAQKAIQNLLDYLKKDDLE 360
Query: 293 -----TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
T I I PG++++ V +L++NFH P+STLL+LVSAF + K+Y +A+ H +RF
Sbjct: 361 ALHSSTQIIIAPGFQYKIVKMLVTNFHQPQSTLLLLVSAFL-HGDWHKVYDYALQHDFRF 419
Query: 348 YSYGDTSLLFQ 358
SYGD+SLL
Sbjct: 420 LSYGDSSLLIP 430
>gi|182413854|ref|YP_001818920.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Opitutus
terrae PB90-1]
gi|177841068|gb|ACB75320.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase [Opitutus
terrae PB90-1]
Length = 398
Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats.
Identities = 127/401 (31%), Positives = 184/401 (45%), Gaps = 60/401 (14%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
FD++LPP IA P RD +RL+V+ ++ H ++LP FL + D + N
Sbjct: 12 TDLFDYELPPRLIAQTPAERRDRSRLLVIDRATRK---LAHHTFAELPKFLRAGDTLFRN 68
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVS--------------------------- 95
N V+ A+L+ R E+ C L +
Sbjct: 69 NAAVLPARLHARRP-----TGGEVECFLLQQEPTAGSGTGVPPVIQPAEAIQSSRAGRPC 123
Query: 96 PNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSI-SGIELERQI 154
W +P + + G S+ +++K G + F+ +
Sbjct: 124 HEIWRCLIKPGRRLAVGATFAHPSK----AFTGEILEKHADGTAQVRFTTSDHRPITAVA 179
Query: 155 SLVGTIPLPPYIARKRPIDARDYVD------YQTTYAK--IQGSVAAPTAGLHFTSNLLS 206
+ +G +PLPPYI R D YQT YA Q +VAAPTAGLHFT LL+
Sbjct: 180 NELGDVPLPPYIERDPHAPDHDRQRQLDLSRYQTVYANAARQVAVAAPTAGLHFTPELLA 239
Query: 207 RLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIV 266
L ++G++ VTLHVG GTF P+ ++H +H E+ I A T +AL + GR +
Sbjct: 240 ALTAMGVRTADVTLHVGLGTFQPISTATIEEHRIHRELYEIPASTQRALFPPLT--GRRI 297
Query: 267 SVGTTSLRLLETATTEDGIINPWS----GFTNIFITPGYRFRAVDILMSNFHLPKSTLLM 322
+VGTTS+R +E ++ P IFI P F VD L++NFH P+STLL
Sbjct: 298 AVGTTSVRTIEDFLSQHSTPRPEEAAHVAEAGIFIYPPREFCGVDALITNFHQPRSTLLC 357
Query: 323 LVSAFC------GIEETKKMYQHAISHAYRFYSYGDTSLLF 357
LVSAF GI +++Y AI+ YRF+SYGD L+
Sbjct: 358 LVSAFLTPGSTDGIAWIREIYAEAIAREYRFFSYGDAMLIL 398
>gi|302346566|ref|YP_003814864.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella melaninogenica ATCC 25845]
gi|302150780|gb|ADK97041.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella melaninogenica ATCC 25845]
Length = 423
Score = 322 bits (826), Expect = 5e-86, Method: Composition-based stats.
Identities = 131/430 (30%), Positives = 192/430 (44%), Gaps = 90/430 (20%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++++ LP RIA P+ RD ++L++ +S+ + +LP +L +VFN
Sbjct: 10 ISDYNYPLPDERIAKFPLTERDHSKLLLY-----KHGDVSEDIFYNLPEYLPKGALMVFN 64
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------------WSVYARPSKVIK 110
NTKVI A+++ + I L P W K K
Sbjct: 65 NTKVIQARMHFRKE-----TGALIEVFLMEPAQPTDYELMFQTNHECAWLCMVGNLKKWK 119
Query: 111 KGDILHFFSQDGQSRLEATVIDKWNTGE--------ILLVFSISGIELERQISLVGTIPL 162
+G + F GQ +D+ E I + + I + VG +P+
Sbjct: 120 EGALKRAFEIKGQKLTLTATMDRSKVQEQAGGTNHWIQFEWDNTNISFAEILEAVGELPI 179
Query: 163 PPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHV 222
PPY+ R + D YQT Y+KI+GSVAAPTAGLHFT +L L G+ +TLHV
Sbjct: 180 PPYLN--RATEESDKETYQTVYSKIKGSVAAPTAGLHFTDKVLKALDEHGVDREELTLHV 237
Query: 223 GAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET---- 278
GAGTF PVK ++ + H MH+E + T L + V+VGTTS+R LE+
Sbjct: 238 GAGTFKPVKSQEIEGHNMHTEFVVVRRQT---LEKLLKHNCHAVAVGTTSVRTLESLYYM 294
Query: 279 ---------ATTEDGIINPWSGF------------------------------------- 292
+D +N W +
Sbjct: 295 GVKLVLSPETAEKDLHVNQWEPYDLPHNEEGLVVVNGKVITAEDSIRHLLAYLDKDGLNV 354
Query: 293 ----TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
T I I PGY ++ V L++NFH P+STLL+LVSAF + +K+Y +A+SH +RF
Sbjct: 355 LHSSTQIIIAPGYTYKIVKALVTNFHQPQSTLLLLVSAFLKGD-WRKVYDYALSHDFRFL 413
Query: 349 SYGDTSLLFQ 358
SYGD+SLL
Sbjct: 414 SYGDSSLLIP 423
>gi|189913086|ref|YP_001964975.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase (queuosine
synthetase) [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|189913420|ref|YP_001964649.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Leptospira
biflexa serovar Patoc strain 'Patoc 1 (Paris)']
gi|167777762|gb|ABZ96062.1| S-adenosylmethionine:tRNA-ribosyltransferase- isomerase (queuosine
synthetase) [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167781488|gb|ABZ99785.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase [Leptospira
biflexa serovar Patoc strain 'Patoc 1 (Paris)']
Length = 346
Score = 322 bits (826), Expect = 5e-86, Method: Composition-based stats.
Identities = 130/356 (36%), Positives = 180/356 (50%), Gaps = 14/356 (3%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ EFDF LP +IA P RD +RL++V D+ +L D +V+N
Sbjct: 4 LNEFDFHLPEEQIARFPAKNRDESRLLLVDRANETFKEA--PFFRDIRNWLKPGDVLVYN 61
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
TKV ++ E + + N WS + ++ G+ L
Sbjct: 62 ETKVSYRRVYLQVESGRIH---EAIFLDTLEDNANIWSCILKNRAKLRLGENLWPVGFKE 118
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
V + + LL + +L+ + GTIP+PPY+ RK D D YQT
Sbjct: 119 FP----FVYESKDNELSLLRSERTITDLD--FEVFGTIPIPPYLKRKAIED--DKFRYQT 170
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
+AK GSVAAPTAGLHFT +L LI +GI+ V L VG GTF P+ E +H
Sbjct: 171 IFAKKSGSVAAPTAGLHFTDSLKLELIQLGIQFVPVNLQVGYGTFRPLTTEQWQTKTLHK 230
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITPGY 301
E I +A LNS K G RI++VGTTSLR+LET ++ G T+IF++PG
Sbjct: 231 ERYEITDESASQLNSAKKEGRRIIAVGTTSLRVLETVFDSQQQKFKVGLGQTDIFLSPGD 290
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+V L++NFHLPKS+LL+LVSAF YQ+A+ + +RFYSYGD+ LF
Sbjct: 291 NIESVHGLITNFHLPKSSLLLLVSAFANSRLVMNAYQYALQNQFRFYSYGDSMFLF 346
>gi|261880535|ref|ZP_06006962.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
bergensis DSM 17361]
gi|270332758|gb|EFA43544.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
bergensis DSM 17361]
Length = 421
Score = 322 bits (826), Expect = 6e-86, Method: Composition-based stats.
Identities = 134/431 (31%), Positives = 196/431 (45%), Gaps = 90/431 (20%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +++++L RIA P+ RD ++L++ + +SD + +LP +L +V
Sbjct: 7 HISDYNYELADERIAKFPLTQRDHSKLLLYNKGK-----VSDDVFYNLPNYLPEGALLVC 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP------------NSWSVYARPSKVI 109
NNT+VI A+++ + I L P SW K
Sbjct: 62 NNTRVIQARMHFRKE-----TGALIEVFLMEPALPADYEQMFQSTGRCSWLCMVGNLKKW 116
Query: 110 KKGDILHFFSQDGQSRLEATVIDKWNTGE--------ILLVFSISGIELERQISLVGTIP 161
K+G + F G +D+ T E I V+ S + + VG +P
Sbjct: 117 KEGTLERDFQIKGHRLTLTASMDRDRTQEQSGGTNYWIDFVWDNSEVNFADILETVGELP 176
Query: 162 LPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLH 221
+PPY+ R+ D YQT Y+KI GSVAAPTAGLHFT +L + + GI VTLH
Sbjct: 177 IPPYLNRE--AQESDKTTYQTVYSKINGSVAAPTAGLHFTDEVLQAIDAKGITRDEVTLH 234
Query: 222 VGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT- 280
VGAGTF PVK E D H MH+E I T L + + ++VGTTS+R LE+
Sbjct: 235 VGAGTFRPVKSETIDGHSMHTEYVVIHRHT---LQRLLEHDCQAIAVGTTSVRTLESLYY 291
Query: 281 -----------TEDG-IINPWSGF------------------------------------ 292
TED +N W +
Sbjct: 292 MGVKLSQCSDLTEDQLHVNQWEPYDLPHDAEGLVLVEDKAVTVRSAIQNLLDYLDRDNLD 351
Query: 293 -----TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
T I I PGY ++ V +L++NFH P+STLL+LVSAF + +K+Y +A+++ +RF
Sbjct: 352 TLHSSTQIIIAPGYTYKIVKMLITNFHQPQSTLLLLVSAFLKGD-WRKVYDYALANDFRF 410
Query: 348 YSYGDTSLLFQ 358
SYGD+SLL
Sbjct: 411 LSYGDSSLLIP 421
>gi|114778172|ref|ZP_01453059.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Mariprofundus ferrooxydans PV-1]
gi|114551590|gb|EAU54144.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Mariprofundus ferrooxydans PV-1]
Length = 342
Score = 322 bits (826), Expect = 6e-86, Method: Composition-based stats.
Identities = 113/314 (35%), Positives = 167/314 (53%), Gaps = 20/314 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V ++DFDLP IA +P+ RD++RL+ + ++D + DLP + D V
Sbjct: 1 MRVSDYDFDLPEKSIASQPLRQRDASRLLTL---SGEDGQLTDRWIRDLPQLVEPGDVWV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP-NSWSVYARPSKVIKKGDILHFFS 119
N+T+VI A+L G + ++ L + W + + +K +K G ++ F
Sbjct: 58 VNDTRVIPARLIGQKSS-----GGKVEVLLLEPSDKTDVWRAWGKSNKPLKAGTVITFT- 111
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ A V+ + G+ +LV ++ ++ I G +PLPPYI RP D
Sbjct: 112 ----NTFSALVLSR--DGKDILVHLLA-DDVPAAIEAHGHMPLPPYIN--RPDSEEDKQR 162
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A+ G+VAAPTAGLH T+ L++ + G VTLHVG GTF PV+VE+ D+H+
Sbjct: 163 YQTVFARHAGAVAAPTAGLHLTTELMAAMEEAGAVFAHVTLHVGPGTFQPVQVENLDEHV 222
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MH E + TA +N +S+G RIV+VGTTSLR LE A G + S T+IFITP
Sbjct: 223 MHEEGYIVPEETATLVNMARSQGRRIVAVGTTSLRTLEAAGAS-GELLAGSDRTSIFITP 281
Query: 300 GYRFRAVDILMSNF 313
GY F +
Sbjct: 282 GYHFSYGRCAVDQL 295
>gi|218249453|ref|YP_002374555.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein QueA) [Borrelia burgdorferi ZS7]
gi|226322064|ref|ZP_03797589.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi Bol26]
gi|218164641|gb|ACK74702.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein QueA) [Borrelia burgdorferi ZS7]
gi|226232654|gb|EEH31408.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi Bol26]
Length = 343
Score = 322 bits (825), Expect = 6e-86, Method: Composition-based stats.
Identities = 127/361 (35%), Positives = 186/361 (51%), Gaps = 23/361 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF F+LP S I P R S+RL+V+ P L + + V+++ ++NSN +
Sbjct: 1 MKTKEFHFNLPHSLIEQYPSEKRGSSRLIVLDPQLQK--IYHKNSVNNILKYINSN---I 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+K +++ N + + R+ N ++ SK G+ F
Sbjct: 56 FNNSKARKSRIYAESEMSSN-----VEFLILDRIGTNLFTALVSKSKKQIIGNFYKFPEG 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L N+ E++L F+ E +PLP YI KR D D Y
Sbjct: 111 LMGEILS------KNSSEVVLKFNNDVG--EDYFEKHCFVPLPSYI--KRDYDKIDEDRY 160
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS A+ TAGLHF+ +L S + I+ F+TLHVG GTF+PV+ + ++H M
Sbjct: 161 QTIYSKYVGSAASATAGLHFSIDLFSVFENNNIEYDFITLHVGLGTFLPVRSKKVEEHNM 220
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFITP 299
H E I A L + K G +I+S+ TT+LR LE++ + TN+FI P
Sbjct: 221 HFETFLIKDFVAVRLQNAKLLGKKILSIVTTTLRALESSYDNNLKKFKTGQQSTNLFIYP 280
Query: 300 G--YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
G Y F+ VD+L +NFH P+STLLMLVS+F G + Y+ AI+ Y+F+SYGD L+
Sbjct: 281 GKNYCFKFVDMLFTNFHTPQSTLLMLVSSFAGKDFVFSFYEEAINKGYKFFSYGDAMLIL 340
Query: 358 Q 358
Sbjct: 341 N 341
>gi|268680076|ref|YP_003304507.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Sulfurospirillum deleyianum DSM 6946]
gi|268618107|gb|ACZ12472.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Sulfurospirillum deleyianum DSM 6946]
Length = 308
Score = 322 bits (825), Expect = 6e-86, Method: Composition-based stats.
Identities = 123/334 (36%), Positives = 182/334 (54%), Gaps = 31/334 (9%)
Query: 29 MVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISC 88
MV + + I+ L FL + ++ N+T+V+ A++ G + EI
Sbjct: 1 MVFNRSSG---QITHTFFKHLFDFLPEDIGVLLNDTRVVKARIFGKKES-----GGEIEL 52
Query: 89 TLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFS---- 144
L+ + N +SVY + +KKG L F + LEA +I+ G L+ F
Sbjct: 53 LLNAPLQENLYSVYIK--GRVKKGMRLFF-----DADLEAELIELKEDGTRLVAFFRKNE 105
Query: 145 -ISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSN 203
+ L + ++G IPLPPYI KR D VDYQT +AK QG+VAAPTA LHFT +
Sbjct: 106 ALHTKALFDILEIIGHIPLPPYI--KREDQEEDSVDYQTVFAKEQGAVAAPTASLHFTDS 163
Query: 204 LLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGG 263
+ L + +F+TLHVGAGTF PV+ E +H+MHSEI I T + + S K
Sbjct: 164 MFEALKKR-YETHFLTLHVGAGTFKPVEAEHILEHVMHSEIYTIPELTCKLIESKK---- 218
Query: 264 RIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLML 323
+++VGTT R +E + + G ++F+ P V+ L++NFHLPKSTL+ML
Sbjct: 219 PLLAVGTTVTRTVEYYARTNIPV----GKCDLFLHPNNPPLRVNHLLTNFHLPKSTLIML 274
Query: 324 VSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
V++F GIE+T ++Y+ A+ YRF+SYGD L+
Sbjct: 275 VASFIGIEKTLELYEEAVKEKYRFFSYGDAMLII 308
>gi|317969076|ref|ZP_07970466.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Synechococcus sp. CB0205]
Length = 340
Score = 321 bits (824), Expect = 9e-86, Method: Composition-based stats.
Identities = 126/344 (36%), Positives = 179/344 (52%), Gaps = 16/344 (4%)
Query: 20 VFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHI 79
+ PR +ARL+ + C S V +L L D +V NNT+V+ A+L R
Sbjct: 1 MEPRHAARLLALEGPEGC----SHQTVWELQQLLKPGDLLVVNNTRVLKARLQARRPS-- 54
Query: 80 NRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEI 139
+ + V + W A+P+K +K G+IL + V TG
Sbjct: 55 ---GGAVELLVLEPVEGSDWLCLAKPAKRLKPGEILQMEHPGQPLQPLEIVAIDAETGGR 111
Query: 140 LLVFSISG---IELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTA 196
++ F +E ++ G IPLPPYI + + D YQT YA G+VAAPTA
Sbjct: 112 VVRFPAECTTPEAIEALLARYGEIPLPPYIHQH---SSEDDSRYQTRYASRPGAVAAPTA 168
Query: 197 GLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALN 256
GLH + LL L + G++ VTLHVG GTF PV+ ED +HSE + A +A+
Sbjct: 169 GLHLSDALLEALEARGVQRTTVTLHVGLGTFRPVETEDLTQLELHSEWVEVSAAAVEAVA 228
Query: 257 SVKSRGGRIVSVGTTSLRLLETATT-EDGIINPWSGFTNIFITPGYRFRAVDILMSNFHL 315
++RGGR+++VGTTS+R LE G + P +G N+ I PGYRF V L++NFHL
Sbjct: 229 QCRARGGRVIAVGTTSVRSLEAVAQLHGGELQPHAGPVNLVIQPGYRFAVVQGLLTNFHL 288
Query: 316 PKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
PKS+LL+LVSA G +Y+ A + YRF+SYGD + +
Sbjct: 289 PKSSLLLLVSALVGRRRLLDLYEEAKAEGYRFFSYGDAMWIAPE 332
>gi|291515347|emb|CBK64557.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Alistipes shahii WAL 8301]
Length = 403
Score = 321 bits (824), Expect = 9e-86, Method: Composition-based stats.
Identities = 131/413 (31%), Positives = 196/413 (47%), Gaps = 72/413 (17%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ FD+DLP RIA P+ R +++L+V I++ +D+ L + + +VFN
Sbjct: 7 ISRFDYDLPDERIAKFPLAERSASKLLVWRGG-----EIAEKRFADIGDVLPAGELLVFN 61
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSP------------NSWSVYARPSKVIK 110
NTKVI A++ + I P +WS K K
Sbjct: 62 NTKVIRARIVMHKPS-----GARIEVFCLEPHDPADYERAFAVTGGCTWSCIVGNRKKWK 116
Query: 111 KG-DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARK 169
+G ++F L A +++ ++ + + + + +G IP+PPY+ R+
Sbjct: 117 EGYVEINFERGGCAEHLRAWIVEDHGRECVVRFEWTAPMTFGQLLEYLGRIPIPPYLNRE 176
Query: 170 RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
+ D YQT Y+K +GSVAAPTAGLHFT L+ + + G VTLHVGAGTF+P
Sbjct: 177 --SEEIDNTRYQTVYSKFEGSVAAPTAGLHFTPELIGEMKARGFAFEEVTLHVGAGTFLP 234
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-------- 281
VK ED H MH+E + T L + G I +VGTTS+R LE+
Sbjct: 235 VKDEDAARHPMHTEHFEVRRATVVRL---LEKWGHITAVGTTSVRTLESLAALAWRIRTA 291
Query: 282 ----EDGIINPW------------------SGF------------TNIFITP-GYRFRAV 306
++ W SG+ T I ITP Y FR V
Sbjct: 292 GTPDAGRVVGQWELYDIPAEFSGREALQELSGYMEREGLDRLKASTQIMITPLDYEFRIV 351
Query: 307 DILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
+++NFH PKSTLL+LVSAF G + +++Y +A+ H +RF SYGD+S+L ++
Sbjct: 352 HNIVTNFHQPKSTLLLLVSAFVG-DGWRRIYDYALGHGFRFLSYGDSSVLLRE 403
>gi|260912482|ref|ZP_05919018.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
sp. oral taxon 472 str. F0295]
gi|260633401|gb|EEX51555.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
sp. oral taxon 472 str. F0295]
Length = 407
Score = 321 bits (823), Expect = 1e-85, Method: Composition-based stats.
Identities = 134/417 (32%), Positives = 195/417 (46%), Gaps = 76/417 (18%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+K++++DLP RIA P+ RD ++L+V + +S + S++ +L +VF
Sbjct: 7 RIKDYNYDLPDERIAKFPLPERDKSKLLVYNHG-----EVSQDVFSNITRYLPQGALMVF 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP------------NSWSVYARPSKVI 109
NNTKVI A+L+ + I L P SW K
Sbjct: 62 NNTKVIQARLHFRKE-----TGSLIEIFLLEPALPADYEQMFQTTGACSWYCLVGNLKKW 116
Query: 110 KKGDILHFFSQDGQS--RLEATVIDKWNTG-EILLVFSISG-IELERQISLVGTIPLPPY 165
K G + GQ +L A T +I ++ + I VG +P+PPY
Sbjct: 117 KSGPLTTTVEMPGQPSVQLSAERDMSCETALKIDFKWTGDDKLSFAELIDKVGELPIPPY 176
Query: 166 IARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAG 225
+ R D YQT Y+KI+GSVAAPTAGLHFT +L+ + GI +TLHVGAG
Sbjct: 177 LNRN--TQESDKTTYQTVYSKIKGSVAAPTAGLHFTQKVLADIDQHGIDREELTLHVGAG 234
Query: 226 TFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET------- 278
TF PVK E+ + H MH+E I T L + V+VGTTS+R LE+
Sbjct: 235 TFKPVKSEEIEGHAMHTEYVCIRRST---LEKLLQHNCEAVAVGTTSVRTLESLYYMGCK 291
Query: 279 ------ATTEDGIINPWSGF-------------------------------TNIFITPGY 301
+ + +N W + T I I PGY
Sbjct: 292 VKANPNVSLDQLHVNQWEPYASTTTTITPAEAIGELIAYMDRNNLPSLHSSTQIIIAPGY 351
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+++ V L++NFH P+STLL+LVSAF G + K +Y++A+ + +RF SYGD+S+L
Sbjct: 352 QYKIVKRLITNFHQPQSTLLLLVSAFVGGD-WKSIYRYALDNDFRFLSYGDSSILIP 407
>gi|258647281|ref|ZP_05734750.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
tannerae ATCC 51259]
gi|260852936|gb|EEX72805.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
tannerae ATCC 51259]
Length = 409
Score = 321 bits (822), Expect = 1e-85, Method: Composition-based stats.
Identities = 132/416 (31%), Positives = 196/416 (47%), Gaps = 77/416 (18%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+K++++ LP RIA PV PRD ++L++ +S+ +LP +L +VF
Sbjct: 8 QIKDYNYTLPEDRIAKYPVAPRDHSKLLLYRDGR-----VSEDSFYNLPTYLKPGALMVF 62
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN------------SWSVYARPSKVI 109
NNTKVI A+L+ + I +P +W+ K
Sbjct: 63 NNTKVIFARLHFQKA-----TGALIEIFCLEPHTPADYQQSFAATRRVTWTCLVGNMKKW 117
Query: 110 KKGD-ILHFFSQDGQSRLEATVIDKWNTG-EILLVFSISGIELERQISLVGTIPLPPYIA 167
K+G D + L A TG EI + + + +G +P+PPY+
Sbjct: 118 KEGRLERTVKVGDRELLLTAEHKGPAGTGFEIAFDWGDDAVSFSEVLDAIGELPIPPYLN 177
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
R+ + D +YQT Y+KI+GSVAAPTAGLHFT ++L RL GI +TLHVGAGTF
Sbjct: 178 RQ--TEQSDLNNYQTVYSKIEGSVAAPTAGLHFTDDVLRRLDEAGIVREEITLHVGAGTF 235
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------- 278
PVK E+ + H MH+E + Q + + + ++VGTTS+R LE+
Sbjct: 236 KPVKSEEIEGHTMHAEWIAVSR---QNIEHLLAHDCSCIAVGTTSVRTLESLYYIGVLIH 292
Query: 279 ----ATTEDGIINPWSGF----------------------------------TNIFITPG 300
ED + W + T I I PG
Sbjct: 293 RNPHVAPEDLHVPQWLPYEYETSTEEKLTPEAALREILAYLDRNRMSVLHTATQIIIAPG 352
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
Y ++ V +++NFH P+STLL+LVSAF G + +Y +A++H +RF SYGD+SLL
Sbjct: 353 YTYKIVKTMVTNFHQPQSTLLLLVSAFVG-GNWRTIYDYALAHDFRFLSYGDSSLL 407
>gi|213420137|ref|ZP_03353203.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
Length = 272
Score = 319 bits (819), Expect = 3e-85, Method: Composition-based stats.
Identities = 103/280 (36%), Positives = 148/280 (52%), Gaps = 15/280 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLLSLEGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ + AT+ + G + V + ++ +G +PLPPYI RP + D Y
Sbjct: 113 E---SIHATMTARH--GALFEVEFNDPRPVLDILNAIGHMPLPPYI--DRPDEDADRELY 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y++ G+VAAPTAGLHF LL+ L G+++ FVTLHVGAGTF PV+V+ +DHIM
Sbjct: 166 QTVYSEKPGAVAAPTAGLHFDEPLLAALREKGVEMAFVTLHVGAGTFQPVRVDTIEDHIM 225
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT 280
HSE + A+ + K+RG R+++VGTTS+R LE+A
Sbjct: 226 HSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAA 265
>gi|288802174|ref|ZP_06407614.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella melaninogenica D18]
gi|288335141|gb|EFC73576.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella melaninogenica D18]
Length = 423
Score = 319 bits (819), Expect = 3e-85, Method: Composition-based stats.
Identities = 129/430 (30%), Positives = 191/430 (44%), Gaps = 90/430 (20%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++++ LP RIA P+ RD ++L++ +S+ + +LP +L ++FN
Sbjct: 10 ISDYNYPLPDERIAKFPLTERDHSKLLLY-----KHGEVSEDIFYNLPEYLPKGALMIFN 64
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------------WSVYARPSKVIK 110
NTKVI A+++ + I L P W K K
Sbjct: 65 NTKVIQARMHFRKE-----TGALIEVFLMEPAQPTDYELMFQTNHECAWLCMVGNLKKWK 119
Query: 111 KGDILHFFSQDGQSRLEATVIDKWNTGE--------ILLVFSISGIELERQISLVGTIPL 162
+G + F G +D+ E I + + I + VG +P+
Sbjct: 120 EGALKRAFEIKGHKLTLTATMDRSKVQEQAGGTNHWIQFEWDNTNISFAEILEAVGELPI 179
Query: 163 PPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHV 222
PPY+ R + D YQT Y+KI+GSVAAPTAGLHFT +L L G+ +TLHV
Sbjct: 180 PPYLN--RATEESDKETYQTVYSKIKGSVAAPTAGLHFTDKVLKALDEHGVDREELTLHV 237
Query: 223 GAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET---- 278
GAGTF PVK ++ + H MH+E + T L + V+VGTTS+R LE+
Sbjct: 238 GAGTFKPVKSQEIEGHNMHTEFVVVRRQT---LEKLLKHKCHAVAVGTTSVRTLESLYYM 294
Query: 279 ---------ATTEDGIINPWSGF------------------------------------- 292
+D +N W +
Sbjct: 295 GVKLVLSPETAEKDLHVNQWEPYDLPHNEEGLVVVNGKVITAEESIRHLLAYLDKDGLNV 354
Query: 293 ----TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
T I I PGY ++ V L++NFH P+STLL+LVSAF + +K+Y +A+SH +RF
Sbjct: 355 LHSSTQIIIAPGYTYKIVKALVTNFHQPQSTLLLLVSAFLKGD-WRKVYDYALSHDFRFL 413
Query: 349 SYGDTSLLFQ 358
SYGD+SLL
Sbjct: 414 SYGDSSLLIP 423
>gi|226321149|ref|ZP_03796690.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi 29805]
gi|226233441|gb|EEH32181.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi 29805]
Length = 343
Score = 319 bits (817), Expect = 5e-85, Method: Composition-based stats.
Identities = 124/361 (34%), Positives = 185/361 (51%), Gaps = 23/361 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF F+LP S I P R S+RL+V+ P L + + V+++ ++NSN +
Sbjct: 1 MKTKEFHFNLPHSLIEQYPSEKRGSSRLIVLDPQLQK--IYHKNSVNNILKYINSN---I 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+K +++ N + + R+ N ++ SK G+ F
Sbjct: 56 FNNSKARKSRIYAESEMSSN-----VEFLILDRIGTNLFTALVSKSKKQIIGNFYKFPEG 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L N+ E++L F+ E +PLP YI KR D D Y
Sbjct: 111 LMGEILS------KNSSEVVLKFNNDVG--EDYFEKHCFVPLPSYI--KRDYDKIDEDRY 160
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS A+ TA LHF+ +L S + I+ F+TLHVG GTF+PV+ + ++H M
Sbjct: 161 QTIYSKYVGSAASATAELHFSIDLFSVFENNNIEYDFITLHVGLGTFLPVRSKKVEEHNM 220
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFITP 299
H E I A L + K G +I+S+ TT+LR LE++ + TN+FI P
Sbjct: 221 HFETFLIKDFVAVRLQNAKLLGKKILSIVTTTLRALESSYDNNLKKFKTGKQSTNLFIYP 280
Query: 300 G--YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
G Y F+ D+L +NFH+P+STLLMLVS+F G + Y+ A++ Y+F+SYGD L+
Sbjct: 281 GKNYCFKFFDMLFTNFHIPQSTLLMLVSSFAGKDFVFSSYEEAVNKGYKFFSYGDAMLIL 340
Query: 358 Q 358
Sbjct: 341 N 341
>gi|195941761|ref|ZP_03087143.1| S-adenosylmethionine: tRNA ribosyltransferase- isomerase [Borrelia
burgdorferi 80a]
Length = 343
Score = 318 bits (816), Expect = 7e-85, Method: Composition-based stats.
Identities = 128/361 (35%), Positives = 186/361 (51%), Gaps = 23/361 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF F+L S I P R S+RL+V+ P L + + V+++ ++NSN V
Sbjct: 1 MKTKEFHFNLSYSLIEQYPSEKRGSSRLIVLDPQLQK--IYHKNSVNNILKYINSN---V 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+K +++ N + + R+ N ++ SK G+ F
Sbjct: 56 FNNSKARKSRIYAESEMSSN-----VEFLILDRIDTNLFTALVSKSKKQIIGNFYKFPEG 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L N+ E++L F+ + E +PLP YI KR D D Y
Sbjct: 111 LMDEILS------KNSSEVVLKFNNNVG--EDYFEKHCFVPLPSYI--KRDYDKIDEDRY 160
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS A+ TAGLHF+ +L S + I+ F+TLHVG GTF+PV+ + ++H M
Sbjct: 161 QTIYSKYVGSTASATAGLHFSRDLFSAFENNNIEYDFITLHVGLGTFLPVRSKKVEEHNM 220
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFITP 299
H E I A L + K G RI+S+ TT+LR LE++ + TN+FI P
Sbjct: 221 HFETFLIKDFVAVRLQNAKLLGKRILSIVTTTLRALESSYDNNLKKFKTGQQSTNLFIYP 280
Query: 300 G--YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
G Y F+ VD+L +NFH P+STLLMLVS+F G + Y+ AI+ Y+F+SYGD L+
Sbjct: 281 GKNYCFKFVDMLFTNFHTPQSTLLMLVSSFAGKDFVFSFYEEAINKGYKFFSYGDAMLIL 340
Query: 358 Q 358
Sbjct: 341 N 341
>gi|8247949|sp|O51053|QUEA_BORBU RecName: Full=S-adenosylmethionine:tRNA
ribosyltransferase-isomerase; AltName: Full=Queuosine
biosynthesis protein queA
Length = 343
Score = 318 bits (816), Expect = 7e-85, Method: Composition-based stats.
Identities = 128/361 (35%), Positives = 187/361 (51%), Gaps = 23/361 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF F+L S I P R S+RL+V+ P L + + V+++ ++NSN +
Sbjct: 1 MKTKEFHFNLSHSLIEQYPSEKRGSSRLIVLDPQLQK--IYHKNSVNNILKYINSN---I 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+K +++ N + + R+ N ++ SK G+ F
Sbjct: 56 FNNSKARKSRIYAESEMSSN-----VEFLILDRIDTNLFTALVSKSKKQIIGNFYKFPEG 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L N+ E++L F+ + E +PLP YI KR D D Y
Sbjct: 111 LMDEILS------KNSSEVVLKFNNNVG--EDYFEKHCFVPLPSYI--KRDYDKIDEDRY 160
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS A+ TAGLHF+ +L S + I+ F+TLHVGAGTF+PV+ + ++H M
Sbjct: 161 QTIYSKYVGSTASATAGLHFSRDLFSAFENNNIEYDFITLHVGAGTFLPVRSKKVEEHNM 220
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFITP 299
H E I A L + K G RI+S+ TT+LR LE++ + TN+FI P
Sbjct: 221 HFETFLIKDFVAVRLQNAKLLGKRILSIVTTTLRALESSYDNNLKKFKTGQQSTNLFIYP 280
Query: 300 G--YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
G Y F+ VD+L +NFH P+STLLMLVS+F G + Y+ AI+ Y+F+SYGD L+
Sbjct: 281 GKNYCFKFVDMLFTNFHTPQSTLLMLVSSFAGKDFVFSFYEEAINKGYKFFSYGDAMLIL 340
Query: 358 Q 358
Sbjct: 341 N 341
>gi|299140490|ref|ZP_07033628.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
oris C735]
gi|298577456|gb|EFI49324.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
oris C735]
Length = 416
Score = 318 bits (815), Expect = 9e-85, Method: Composition-based stats.
Identities = 131/427 (30%), Positives = 207/427 (48%), Gaps = 87/427 (20%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ E+D+ LP RIA P+ RD ++L++ +SD + +LP +L + +V+
Sbjct: 7 KISEYDYVLPDERIAKFPLPQRDHSKLLIYEHGK-----VSDDVFFNLPKYLPQHALMVY 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP------------NSWSVYARPSKVI 109
NNT+VI A+++ + I L +P SW K
Sbjct: 62 NNTRVIQARMHFRKE-----TGALIEVFLMEPAAPTDYELMFQTKGQCSWLCMIGNLKKW 116
Query: 110 KKGDILHFFSQDGQSRLEATVIDKWNTGE---------ILLVFSISGIELERQISLVGTI 160
K+G + F G+ L +V+ + + + + I + +VG +
Sbjct: 117 KEGSLKRDFDIKGE-HLTLSVLLNYEKSAHGATGTNYWVDFSWDNANINFAEILEVVGEL 175
Query: 161 PLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTL 220
P+PPY+ R+ + D + YQT Y+KI+GSVAAPTAGLHFT ++L + + GI+ VTL
Sbjct: 176 PIPPYLNRE--TEESDKLTYQTVYSKIKGSVAAPTAGLHFTDDVLRAIEARGIEREEVTL 233
Query: 221 HVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-- 278
HVGAGTF PVK ++ H MH+E + T +N +K + ++VGTTS+R LE+
Sbjct: 234 HVGAGTFKPVKSKEIYGHEMHTEYIVVHRHT--LVNLIKYE-CKAIAVGTTSVRTLESLY 290
Query: 279 -----------ATTEDGIINPWSGF----------------------------------- 292
AT E+ ++ W +
Sbjct: 291 YMGVKLENNPDATEEELHVSQWEPYEREREGGLINGITPVHAIQNLIDWLDKAGVEVLHS 350
Query: 293 -TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T I I PGY ++ V +L++NFH P+STLL+LVSAF + +K+Y +A+++ +RF SYG
Sbjct: 351 STQILIAPGYEYKIVKMLVTNFHQPQSTLLLLVSAFVKGD-WRKIYDYALANNFRFLSYG 409
Query: 352 DTSLLFQ 358
D+SLL
Sbjct: 410 DSSLLIP 416
>gi|255027786|ref|ZP_05299772.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL J2-003]
Length = 225
Score = 317 bits (814), Expect = 1e-84, Method: Composition-based stats.
Identities = 112/229 (48%), Positives = 152/229 (66%), Gaps = 6/229 (2%)
Query: 129 TVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQ 188
T +++ G +L FS GI + +G +PLPPYI + D YQT YAK
Sbjct: 1 TCLEELEHGGRILEFSYEGI-FYEVLEQLGEMPLPPYIKEQLA----DQDRYQTVYAKEN 55
Query: 189 GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFID 248
GS AAPTAGLHFT +LL ++ + G+++ FVTLHVG GTF PV VEDT +H MHSE +
Sbjct: 56 GSAAAPTAGLHFTEDLLEQISAKGVEIIFVTLHVGLGTFRPVDVEDTTNHKMHSEFYRLT 115
Query: 249 APTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITPGYRFRAVD 307
+A+ +N +K++GG++V+VGTTS+R LET A+ DG + SG+T IFI+PGY F+AVD
Sbjct: 116 EESAERINKIKAQGGKVVAVGTTSIRTLETIASRHDGKLVAESGWTEIFISPGYTFQAVD 175
Query: 308 ILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
L++NFHLPKSTL+MLVSA + Y HA+ YRF+S+GD +
Sbjct: 176 ALITNFHLPKSTLIMLVSALSDRTKILAAYNHAVEEQYRFFSFGDAMFI 224
>gi|284036021|ref|YP_003385951.1| Queuosine biosynthesis protein [Spirosoma linguale DSM 74]
gi|283815314|gb|ADB37152.1| Queuosine biosynthesis protein [Spirosoma linguale DSM 74]
Length = 409
Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats.
Identities = 130/420 (30%), Positives = 199/420 (47%), Gaps = 79/420 (18%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+++ EF +DLP RIA P+ RD+++L++ V+S + +DLP+ L N +V
Sbjct: 7 LLLSEFQYDLPDDRIARFPLPQRDASKLLLYKGG-----VVSHNRFTDLPSLLLPNSFLV 61
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLH------------------MRVSPNSWSVY 102
FN+TKVI A+L+ + I L W
Sbjct: 62 FNDTKVIPARLHFTKP-----TGALIELFLLNPFPIEPGGEPAPISLAMEETGTAIWQGM 116
Query: 103 ARPSKVIKKGDIL--HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTI 160
K K+ + L F + +G+ L A+ D ++ + L + + + + + +G I
Sbjct: 117 IGNRKRWKQDEPLVTTFPTPEGEVILTASWHD-YDQSAVRLSWQPAELTFAQLVQYIGEI 175
Query: 161 PLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTL 220
PLPPY+ KR A D YQT Y+K +G+VAAPTAGLHFT+ + L + I ++TL
Sbjct: 176 PLPPYL--KREATATDRETYQTVYSKQEGAVAAPTAGLHFTAAVFEALANNNINHDYLTL 233
Query: 221 HVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT 280
HVGAGTF P+K +D H MH+E T + ++ + +V+VGTTS+R LE+
Sbjct: 234 HVGAGTFQPIKTDDVRQHHMHTEQVVY---TQANVRNLLAHLDTVVAVGTTSMRALESLY 290
Query: 281 TEDGII-----NPWS-------------------------------------GFTNIFIT 298
+ NP+ T I+IT
Sbjct: 291 WIGTKLVRKEPNPFQLDQQYAYQLPDDQQPSVADALNAVLDYLVTANKESVVAHTGIYIT 350
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
PGYR R L++NFH P STL++L++ G + K +Y+ A+ + YRF SYGD+SLL
Sbjct: 351 PGYRIRLCKGLVTNFHQPGSTLILLIATLIG-DSWKNVYKEALENDYRFLSYGDSSLLIP 409
>gi|327313510|ref|YP_004328947.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella denticola F0289]
gi|326944593|gb|AEA20478.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella denticola F0289]
Length = 436
Score = 317 bits (813), Expect = 1e-84, Method: Composition-based stats.
Identities = 129/430 (30%), Positives = 190/430 (44%), Gaps = 90/430 (20%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++++ LP +RIA P+ RD ++L++ +S+ LP +L +VFN
Sbjct: 23 ISDYNYPLPDARIAKFPLSERDHSKLLLY-----KHGEVSEDKFYQLPEYLPKGALMVFN 77
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------------WSVYARPSKVIK 110
NTKVI A+++ + I L P W K K
Sbjct: 78 NTKVIQARMHFRKE-----TGALIEVFLMEPAQPTDYELMFQTNHACAWLCMVGNLKKWK 132
Query: 111 KGDILHFFSQDGQSRLEATVIDKWNTGE--------ILLVFSISGIELERQISLVGTIPL 162
+G + F G +D+ E + + + + + VG +P+
Sbjct: 133 EGALRRTFEIKGHKLTLTATMDRSKVQEQAGGTNHWVNFEWDNTNVSFAEILEAVGELPI 192
Query: 163 PPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHV 222
PPY+ R + D YQT Y+KI+GSVAAPTAGLHFT +L L GI +TLHV
Sbjct: 193 PPYLN--RATEESDKETYQTVYSKIKGSVAAPTAGLHFTDKVLEALDEHGIDREELTLHV 250
Query: 223 GAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET---- 278
GAGTF PVK + + H MH+E + T L + G R ++VGTTS+R LE+
Sbjct: 251 GAGTFKPVKSHEIEGHSMHTEFIVVRRQT---LEKLLKHGCRAIAVGTTSVRTLESLYYM 307
Query: 279 ---------ATTEDGIINPWSGF------------------------------------- 292
+D +N W +
Sbjct: 308 GVKLVSDPETAEKDLHVNQWEPYDLPHNAEGLVETDGKVITVEDAVRHLLAYLDRDGLNA 367
Query: 293 ----TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
T I I PGY ++ V L++NFH P+STLL+LVSAF + +K+Y +A+ H +RF
Sbjct: 368 LHSSTQIIIAPGYTYKLVKALVTNFHQPQSTLLLLVSAFVKGD-WRKIYDYALGHDFRFL 426
Query: 349 SYGDTSLLFQ 358
SYGD+SLL
Sbjct: 427 SYGDSSLLIP 436
>gi|325860315|ref|ZP_08173437.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella denticola CRIS 18C-A]
gi|325482194|gb|EGC85205.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella denticola CRIS 18C-A]
Length = 423
Score = 317 bits (813), Expect = 2e-84, Method: Composition-based stats.
Identities = 129/430 (30%), Positives = 190/430 (44%), Gaps = 90/430 (20%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++++ LP +RIA P+ RD ++L++ +S+ LP +L +VFN
Sbjct: 10 ISDYNYPLPDARIAKFPLSERDHSKLLLY-----KHGEVSEDKFYQLPEYLPKGALMVFN 64
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------------WSVYARPSKVIK 110
NTKVI A+++ + I L P W K K
Sbjct: 65 NTKVIQARMHFRKE-----TGALIEVFLMEPAQPTDYELMFQTNHACAWLCMVGNLKKWK 119
Query: 111 KGDILHFFSQDGQSRLEATVIDKWNTGE--------ILLVFSISGIELERQISLVGTIPL 162
+G + F G +D+ E + + + + + VG +P+
Sbjct: 120 EGALRRAFEIKGHKLTLTATMDRSKVQEQAGGTNHWVNFEWDNTNVSFAEILEAVGELPI 179
Query: 163 PPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHV 222
PPY+ R + D YQT Y+KI+GSVAAPTAGLHFT +L L GI +TLHV
Sbjct: 180 PPYLN--RATEESDKETYQTVYSKIKGSVAAPTAGLHFTDKVLEALDEHGIDREELTLHV 237
Query: 223 GAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET---- 278
GAGTF PVK + + H MH+E + T L + G R ++VGTTS+R LE+
Sbjct: 238 GAGTFKPVKSHEIEGHSMHTEFIVVRRQT---LEKLLKHGCRAIAVGTTSVRTLESLYYM 294
Query: 279 ---------ATTEDGIINPWSGF------------------------------------- 292
+D +N W +
Sbjct: 295 GVKLVSDPETAEKDLHVNQWEPYDLPHNAEGLVETDGKVITVEDAVRHLLAYLDRDGLNA 354
Query: 293 ----TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
T I I PGY ++ V L++NFH P+STLL+LVSAF + +K+Y +A+ H +RF
Sbjct: 355 LHSSTQIIIAPGYTYKIVKALVTNFHQPQSTLLLLVSAFVKGD-WRKIYDYALGHNFRFL 413
Query: 349 SYGDTSLLFQ 358
SYGD+SLL
Sbjct: 414 SYGDSSLLIP 423
>gi|332177835|gb|AEE13525.1| Queuosine biosynthesis protein [Porphyromonas asaccharolytica DSM
20707]
Length = 425
Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats.
Identities = 129/423 (30%), Positives = 190/423 (44%), Gaps = 80/423 (18%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+ LP RIA P+ RD RL++ + DH ++LP L + ++ N
Sbjct: 15 INDYDYPLPDERIAEHPLAERDQCRLLM----SDATGRLEDHTFAELPQLLPPHALLIRN 70
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMR------------VSPNSWSVYARPSKVIK 110
NT+VI A++ V+ I + SW SK +
Sbjct: 71 NTRVIKARIFFVKA-----TGARIEILCLDPYRPVSYEESLSSLGSCSWHCLVGNSKKWR 125
Query: 111 KGDIL--HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIAR 168
+ GQ+ + +S + L G +P+PPY+ R
Sbjct: 126 PEQTISCTLPLAGGQTITLQASRAVETPDVVTFSWSDETKSFGEILELCGQLPIPPYLNR 185
Query: 169 KRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFM 228
+ ++ D DYQT YA+I+GSVAAPTAGLHFT L RL++ G ++ +TLHVGAGTF+
Sbjct: 186 E--TESSDLTDYQTVYARIEGSVAAPTAGLHFTPELDDRLLAEGHRITELTLHVGAGTFL 243
Query: 229 PVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET---------- 278
PVK +H MHSE + T + L ++ V +GTTS+R LE+
Sbjct: 244 PVKGRQVAEHQMHSEYCSVPTATLETL--LEHIDSPFVPIGTTSVRTLESLYWYAVALQQ 301
Query: 279 ATTEDGII--------------NPWSG---------------------------FTNIFI 297
A E G + G T + I
Sbjct: 302 AAQEGGDVAEPFHLDQWYSYRMRQSCGAALPSRREALEILLCYARHRGLGRLTFSTALLI 361
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISH-AYRFYSYGDTSLL 356
PGY++ VDIL++NFH PKSTLL+LVSA G + +Y+HA++ YRF SYGD LL
Sbjct: 362 APGYQYHMVDILVTNFHQPKSTLLLLVSALIG-PRWRTLYEHALADVQYRFLSYGDACLL 420
Query: 357 FQK 359
+++
Sbjct: 421 YRQ 423
>gi|325268978|ref|ZP_08135599.1| queuine tRNA-ribosyltransferase [Prevotella multiformis DSM 16608]
gi|324988599|gb|EGC20561.1| queuine tRNA-ribosyltransferase [Prevotella multiformis DSM 16608]
Length = 423
Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats.
Identities = 131/430 (30%), Positives = 191/430 (44%), Gaps = 90/430 (20%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++ + LP SRIA P+ RD ++L++ +S+ LP +L +VFN
Sbjct: 10 ISDYSYPLPDSRIAKFPLAERDHSKLLLYRHG-----EVSEDTFYRLPEYLPEGALMVFN 64
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------------WSVYARPSKVIK 110
NTKVI A+++ + I L P W K K
Sbjct: 65 NTKVIQARMHFRKE-----TGALIEVFLMEPARPTDYELMFQTNHACAWLCMVGNLKKWK 119
Query: 111 KGDILHFFSQDGQSRLEATVIDKWNTGE--------ILLVFSISGIELERQISLVGTIPL 162
+G + F G +D+ E I + + + + VG +P+
Sbjct: 120 EGSLKRVFEIKGHRLTLTAAMDRSREQELAGGTHHWISFEWDNTNVSFAEILEAVGELPI 179
Query: 163 PPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHV 222
PPY+ R + D YQT Y+K++GSVAAPTAGLHFT +L L GI +TLHV
Sbjct: 180 PPYLN--RATEESDKETYQTVYSKVKGSVAAPTAGLHFTDKVLKSLDGHGIDREELTLHV 237
Query: 223 GAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET---- 278
GAGTF PVK + + H MH+E + T L + G ++VGTTS+R LE+
Sbjct: 238 GAGTFKPVKSREIEGHSMHTEFVVVRRQT---LEKLLKHGCCAIAVGTTSVRTLESLYYM 294
Query: 279 ---------ATTEDGIINPWSGF------------------------------------- 292
A +D ++ W +
Sbjct: 295 GVKLVSDPDAAEKDLHVDQWEPYDLPHNAEGLVEVDGRAVTVEDAVRQLLAYLDRDGLDV 354
Query: 293 ----TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
T I I PGY ++ V IL++NFH P+STLL+LVSAF + +K+Y +A+SH +RF
Sbjct: 355 LHSSTQIIIAPGYDYKIVKILVTNFHQPQSTLLLLVSAFVKGD-WRKIYDYALSHEFRFL 413
Query: 349 SYGDTSLLFQ 358
SYGD+SLL
Sbjct: 414 SYGDSSLLIP 423
>gi|282858829|ref|ZP_06267974.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella bivia JCVIHMP010]
gi|282588398|gb|EFB93558.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella bivia JCVIHMP010]
Length = 423
Score = 316 bits (811), Expect = 2e-84, Method: Composition-based stats.
Identities = 129/430 (30%), Positives = 198/430 (46%), Gaps = 90/430 (20%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++++ LP RIA P+ RD+++L++ + + + +LP +L +VFN
Sbjct: 10 ISDYNYLLPDERIAKFPLAKRDNSKLLLY-----KHGDVVEDIFYNLPKYLPKGGLMVFN 64
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSP------------NSWSVYARPSKVIK 110
NTKVI A+++ + I L +P SW K K
Sbjct: 65 NTKVIQARIHFRKE-----TGALIEVFLLEPTAPTDYELMFQTTHTCSWLCMVGNLKKWK 119
Query: 111 KGDILHFFSQDGQSRLEATVIDKWNTGE--------ILLVFSISGIELERQISLVGTIPL 162
G + F G +++ T I + + + + +VG +P+
Sbjct: 120 DGVLKREFEIKGHKLTLIASLNRDKTANTPGGTNHWIDFSWDNANVSFAEILEMVGELPI 179
Query: 163 PPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHV 222
PPY+ R+ + D YQT Y+KI+GSVAAPTAGLHFT +L L + GI +TLHV
Sbjct: 180 PPYLNRE--TEESDKETYQTVYSKIKGSVAAPTAGLHFTPEVLQALDASGIVRDELTLHV 237
Query: 223 GAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET---- 278
GAGTF PVK E+ + H MH+E + T L ++ + ++VGTTS+R LE+
Sbjct: 238 GAGTFKPVKSEEIEGHNMHTEYVVVHRHT---LENLLAHDCSAIAVGTTSVRTLESLYYM 294
Query: 279 ---------ATTEDGIINPWSGF------------------------------------- 292
AT + +N W +
Sbjct: 295 GVHLAINPDATEAELHVNQWEPYDLEHNEAGLVIINGKVITVASAIENILNYLKKDNLQA 354
Query: 293 ----TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
T I I PG+ ++ V L++NFH P+STLL+LVSAF + +K+Y +A+SH +RF
Sbjct: 355 LHSSTQIIIAPGFTYKIVKALVTNFHQPQSTLLLLVSAFVKGD-WRKIYDYALSHDFRFL 413
Query: 349 SYGDTSLLFQ 358
SYGD+SLL
Sbjct: 414 SYGDSSLLIP 423
>gi|315453597|ref|YP_004073867.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter felis ATCC 49179]
gi|315132649|emb|CBY83277.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter felis ATCC 49179]
Length = 341
Score = 316 bits (811), Expect = 3e-84, Method: Composition-based stats.
Identities = 115/355 (32%), Positives = 181/355 (50%), Gaps = 23/355 (6%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ + +DLP IA P+ P + A+L+V I+ + + F + +V N
Sbjct: 10 LSSYHYDLPAEYIASTPLLPPERAKLLVYKRATG---RITHSTFAHVFDFFPQDALVVLN 66
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+TKVI A+L G + ++ +H S + ++ +V + G L Q
Sbjct: 67 DTKVIKARLYGRKAS-----GGKVELLIHNPHSLHHFNAQI-KGRVPQGG--LIELDQGY 118
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ + + E+ + L+G +P+PPY+ KR D YQ+
Sbjct: 119 SCEVLTPPANLRQVCFYHHQHPLKWEEVLDMLELLGHMPIPPYL--KRADTPTDTQTYQS 176
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
+AK G++AAPTA LHF+ + L++ + F+TLHVGAGTF+ V+ ED H MHS
Sbjct: 177 VFAKHAGAIAAPTASLHFSESAKEHLLA-HFQHAFLTLHVGAGTFVGVECEDIRQHPMHS 235
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E FI T +AL+ I+ VGTT+LR +E + ++ P ++F+ PG
Sbjct: 236 EALFIPEETQRALDHA----PYILCVGTTALRGVEHYKRGN-VLKP----CDLFLHPGNP 286
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
V L++NFHLPKSTL+MLV++ G+E+ ++Y+ AI H YRFYSYGD L+
Sbjct: 287 VSHVQALLTNFHLPKSTLIMLVASMVGLEKCLELYKIAIEHHYRFYSYGDGMLIL 341
>gi|167752859|ref|ZP_02424986.1| hypothetical protein ALIPUT_01120 [Alistipes putredinis DSM 17216]
gi|167659928|gb|EDS04058.1| hypothetical protein ALIPUT_01120 [Alistipes putredinis DSM 17216]
Length = 405
Score = 316 bits (811), Expect = 3e-84, Method: Composition-based stats.
Identities = 133/412 (32%), Positives = 192/412 (46%), Gaps = 72/412 (17%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ FD+DLP RIA P+ R +++L+V IS+ D+ L +VFN
Sbjct: 10 IDRFDYDLPDERIAKYPLEERSASKLLVYERG-----EISERRFRDIGDILPEGTLLVFN 64
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSP------------NSWSVYARPSKVIK 110
NTKVI A++ + I P WS K K
Sbjct: 65 NTKVIRARIIMHKPS-----GARIEVFCLEPHDPADYERAFAVKGSCRWSCIVGNLKKWK 119
Query: 111 KGD-ILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARK 169
+G ++ F + R+ A + +I+ + + + + +G IP+PPY+ R+
Sbjct: 120 EGPLVIDFEYEGRAERMLAWREGEGGREQIVRFEWTADLTFGQLLEHLGRIPIPPYLNRE 179
Query: 170 RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
D YQT Y+K +GSVAAPTAGLHFT L+ R+ + G VTLHVGAGTF+P
Sbjct: 180 --SQEIDNTRYQTVYSKFEGSVAAPTAGLHFTPELIERMRTQGFSFEEVTLHVGAGTFLP 237
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET----------- 278
VK D H MH+E I + + L + I +VGTTS+R LE+
Sbjct: 238 VKDRDAAAHPMHTEHFEIRRSSVERL---LEKWDNITAVGTTSVRTLESLTALAWRIRTS 294
Query: 279 -ATTEDGIINPWS------------------------------GFTNIFITP-GYRFRAV 306
A +I W T I ITP GYRFR V
Sbjct: 295 GAPDASRVIGQWELYDLPEVFTGREALQVLSDYMVREGIEKLKAATQIMITPLGYRFRIV 354
Query: 307 DILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+++NFH PKSTLL+LVSA+ G ++ ++Y +A++H +RF SYGD+S+L +
Sbjct: 355 RNIVTNFHQPKSTLLLLVSAYVG-DDWHRIYDYALTHDFRFLSYGDSSVLMR 405
>gi|281423270|ref|ZP_06254183.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
oris F0302]
gi|281402606|gb|EFB33437.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
oris F0302]
Length = 416
Score = 316 bits (810), Expect = 4e-84, Method: Composition-based stats.
Identities = 127/426 (29%), Positives = 205/426 (48%), Gaps = 85/426 (19%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ E+D+ LP RIA P+ RD ++L++ +SD + +LP +L + +V+
Sbjct: 7 KISEYDYVLPDERIAKFPLPQRDHSKLLMYEHGK-----VSDDVFFNLPKYLPQHALMVY 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP------------NSWSVYARPSKVI 109
NNT+VI A+++ + I L +P SW K
Sbjct: 62 NNTRVIQARMHFRKE-----TGALIEVFLMEPAAPTDYELMFQTKGQCSWLCMIGNLKKW 116
Query: 110 KKGDILHFFSQDGQSRLEATVIDKWNTGEI--------LLVFSISGIELERQISLVGTIP 161
K+G + F G+ + +++ + + + I + + G +P
Sbjct: 117 KEGSLKRDFDIKGEHLTLSVLLNYEKSAHRATGTNYWVDFSWDNANINFAEILEVAGELP 176
Query: 162 LPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLH 221
+PPY+ R+ + D + YQT Y+KI+GSVAAPTAGLHFT ++L + + GI+ VTLH
Sbjct: 177 IPPYLNRE--TEESDKLTYQTVYSKIKGSVAAPTAGLHFTDDVLRAIEARGIEREEVTLH 234
Query: 222 VGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--- 278
+GAGTF PVK ++ H MH+E + T +N +K + ++VGTTS+R LE+
Sbjct: 235 IGAGTFKPVKSKEIYGHEMHTEYIVVHRHT--LVNLIKYE-CKAIAVGTTSVRTLESLYY 291
Query: 279 ----------ATTEDGIINPWSGF------------------------------------ 292
AT E+ ++ W +
Sbjct: 292 MGVKLENNPDATEEELHVSQWEPYEKAREGGLINGITPVHAIQNLIDWLDKAGVEVLHSS 351
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T I I PGY ++ V +L++NFH P+STLL+LVSAF + +K+Y +A+++ +RF SYGD
Sbjct: 352 TQILIAPGYEYKIVKMLVTNFHQPQSTLLLLVSAFVKGD-WRKIYDYALANNFRFLSYGD 410
Query: 353 TSLLFQ 358
+SLL
Sbjct: 411 SSLLIP 416
>gi|298372269|ref|ZP_06982259.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein QueA) [Bacteroidetes oral taxon 274
str. F0058]
gi|298275173|gb|EFI16724.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein QueA) [Bacteroidetes oral taxon 274
str. F0058]
Length = 411
Score = 315 bits (808), Expect = 5e-84, Method: Composition-based stats.
Identities = 138/413 (33%), Positives = 202/413 (48%), Gaps = 72/413 (17%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+ LP RIA P+ RD++ L+ I +DLP L+S D +VFN
Sbjct: 10 INDYDYPLPSERIARYPLPERDASMLLFFDGKD-----IEKKGFADLPELLDSKDFLVFN 64
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------------WSVYARPSKVIK 110
NTKVI A+L V+ EI + P+ W V + K
Sbjct: 65 NTKVIHARLRFVK-----STGAEIEIFCLEPLLPSDYQLSLSSVNSCVWKVMVGNLRRWK 119
Query: 111 KGDILHFFSQDG-QSRLEATVIDKWN--TGEILLVFSISGIELERQISLVGTIPLPPYIA 167
+ DG + +E + N E+ + S I + ++ +G +P+PPY+
Sbjct: 120 SETLHQTADIDGKRCNIEVRYRNPLNNMAHEVEFAWDNSDITFAQILAHLGELPIPPYLN 179
Query: 168 RKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
RK ++ D + YQTTY+K+ GSVAAPTAGLHFT +L RL S GI +TLH+GAGTF
Sbjct: 180 RK--TESADSLTYQTTYSKVLGSVAAPTAGLHFTDRILQRLTSKGIDSTEITLHIGAGTF 237
Query: 228 MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET--------A 279
PVK ++ +H MH+E+ + + + + IV+VGTTS+R LE+ A
Sbjct: 238 QPVKTDNIAEHQMHTEVFAVGLSSLELIA---DNIDSIVAVGTTSVRTLESLYYIGCHIA 294
Query: 280 TTEDGIINPWSGF----------------------------------TNIFITPGYRFRA 305
E + S + T I I PG++FR
Sbjct: 295 KNEPSPVFEVSQWEAYENNGCEMSPRKSIETIIEYMRDNKLDFIVAKTQIMIVPGFKFRI 354
Query: 306 VDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
V+ L++NFH P+STLL+LVSAF G + +K+Y A+ H +RF SYGD+SLL
Sbjct: 355 VNKLITNFHQPRSTLLLLVSAFVGDDNRRKIYDFALGHNFRFLSYGDSSLLTN 407
>gi|213609615|ref|ZP_03369441.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhi str. E98-2068]
Length = 244
Score = 315 bits (808), Expect = 7e-84, Method: Composition-based stats.
Identities = 105/237 (44%), Positives = 150/237 (63%), Gaps = 6/237 (2%)
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ AT+ + G + V + ++ +G +PLPPYI RP + D YQT
Sbjct: 2 DESIHATMTARH--GALFEVEFNDPRPVLDILNAIGHMPLPPYI--DRPDEDADRELYQT 57
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
Y++ G+VAAPTAGLHF LL+ L G+++ FVTLHVGAGTF PV+V+ +DHIMHS
Sbjct: 58 VYSEKPGAVAAPTAGLHFDEPLLAALREKGVEMAFVTLHVGAGTFQPVRVDTIEDHIMHS 117
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--TTEDGIINPWSGFTNIFITPG 300
E + A+ + K+RG R+++VGTTS+R LE+A + +I P+ G T IFI PG
Sbjct: 118 EYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKSDLIEPFFGDTQIFIYPG 177
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
Y+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 178 YQYKVIDALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQKYRFFSYGDAMFIT 234
>gi|313886934|ref|ZP_07820637.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas asaccharolytica PR426713P-I]
gi|312923631|gb|EFR34437.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas asaccharolytica PR426713P-I]
Length = 425
Score = 315 bits (807), Expect = 8e-84, Method: Composition-based stats.
Identities = 129/423 (30%), Positives = 190/423 (44%), Gaps = 80/423 (18%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+ LP RIA P+ RD RL++ + DH ++LP L + ++ N
Sbjct: 15 INDYDYPLPDERIAEHPLAERDQCRLLL----SDATGRLEDHTFAELPQLLPPHALLIRN 70
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMR------------VSPNSWSVYARPSKVIK 110
NT+VI A++ V+ I + SW SK +
Sbjct: 71 NTRVIKARIFFVKA-----TGARIEILCLDPYRPVSYEESLSSLGSCSWHCLVGNSKKWR 125
Query: 111 KGDIL--HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIAR 168
+ GQ+ + +S + L G +P+PPY+ R
Sbjct: 126 PEQTISCTLPLAGGQTITLQASRAVETPDVVTFSWSDETKSFGEILELCGQLPIPPYLNR 185
Query: 169 KRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFM 228
+ ++ D DYQT YA+I+GSVAAPTAGLHFT L RL++ G ++ +TLHVGAGTF+
Sbjct: 186 E--TESSDLTDYQTVYARIEGSVAAPTAGLHFTPELDDRLLAEGHRITELTLHVGAGTFL 243
Query: 229 PVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET---------- 278
PVK +H MHSE + T + L ++ V +GTTS+R LE+
Sbjct: 244 PVKGRQVAEHQMHSEYCSVPTVTLETL--LEHIDSPFVPIGTTSVRTLESLYWYAVALQQ 301
Query: 279 ATTEDGII--------------NPWSG---------------------------FTNIFI 297
A E G + G T + I
Sbjct: 302 AAQEGGDVAEPFHLDQWYSYRMRQSCGAALPSRREALEILLRYARHRGLDRLTFSTALLI 361
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISH-AYRFYSYGDTSLL 356
PGY++ VDIL++NFH PKSTLL+LVSA G + +Y+HA++ YRF SYGD LL
Sbjct: 362 APGYQYHMVDILVTNFHQPKSTLLLLVSALIG-PRWRTLYEHALADVQYRFLSYGDACLL 420
Query: 357 FQK 359
+++
Sbjct: 421 YRQ 423
>gi|145631080|ref|ZP_01786855.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae R3021]
gi|144983365|gb|EDJ90847.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae R3021]
Length = 267
Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats.
Identities = 92/270 (34%), Positives = 137/270 (50%), Gaps = 11/270 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R S RL+ ++ I SD+ ++ D ++
Sbjct: 1 MRVSDFNFDLPDELIARYPKTDRVSCRLLQLNGENG---EIFHRTFSDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKIEVLVERMLDEHRFLAHIRSSKSPKEGAELFLGED 112
Query: 121 D-GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G++ V+ ++ + S L + +G +PLPPYI RP + D
Sbjct: 113 KLGENNGIKAVMKARHSSLFEVELSDKSTALLDVLQTIGHMPLPPYI--DRPDEEADKEC 170
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT Y+K+ G+VAAPTAGLHF NLL +L + G+ FVTLHVGAGTF PV+VE+ +DH+
Sbjct: 171 YQTVYSKVPGAVAAPTAGLHFDENLLEKLKAKGVNFEFVTLHVGAGTFQPVRVENIEDHV 230
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVG 269
MH+E + A+ + K G G
Sbjct: 231 MHAEYVEVSQEVCNAIIATKKSGQTCNCSG 260
>gi|313158857|gb|EFR58237.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Alistipes sp. HGB5]
Length = 403
Score = 313 bits (802), Expect = 3e-83, Method: Composition-based stats.
Identities = 133/412 (32%), Positives = 194/412 (47%), Gaps = 72/412 (17%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ EFD+DLP RIA P+ R +++L+V I + +D+ L +VFN
Sbjct: 8 INEFDYDLPDGRIAKFPLAERSASKLLVYRGG-----EIGEAHFADIGDVLPEGQLLVFN 62
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSP------------NSWSVYARPSKVIK 110
NTKVI A++ + I P WS K K
Sbjct: 63 NTKVIRARIIMHKPS-----GARIEVFCLEPHDPADYERAFAVVGRCEWSCIVGNLKKWK 117
Query: 111 KG-DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARK 169
+G ++F + L A +++ + + + + + +G IP+PPY+ R+
Sbjct: 118 EGYVEINFEHEGRPEHLRAWLVENRGREHTVRFEWSAAMTFGQLLEYLGRIPIPPYLNRE 177
Query: 170 RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
+ DY YQT Y+K +GSVAAPTAGLHFT L+ + + G VTLHVGAGTF+P
Sbjct: 178 --SEEIDYTRYQTVYSKFEGSVAAPTAGLHFTPELIEGMKARGFGFEEVTLHVGAGTFLP 235
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-------- 281
VK +D H MH+E + L + GRI +VGTTS+R LE+ T
Sbjct: 236 VKDDDAARHPMHTEHFEVRRAAVARL---LEKWGRITAVGTTSVRTLESLTALAWRIRTA 292
Query: 282 ----EDGIINPWS------------------------------GFTNIFITP-GYRFRAV 306
+ ++ W T I ITP GY FR V
Sbjct: 293 GTPDAERVVGQWELYDVPAEFSGREALETLLKYMDEKGLERIKAATQIMITPLGYEFRIV 352
Query: 307 DILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+++NFH PKSTLL+LVSAF G + K++Y++A+ H +RF SYGD+S+L +
Sbjct: 353 RNIVTNFHQPKSTLLLLVSAFVGGD-WKRIYEYALGHGFRFLSYGDSSVLMR 403
>gi|227874424|ref|ZP_03992605.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Oribacterium sinus F0268]
gi|227839740|gb|EEJ50189.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Oribacterium sinus F0268]
Length = 207
Score = 312 bits (801), Expect = 4e-83, Method: Composition-based stats.
Identities = 97/207 (46%), Positives = 132/207 (63%), Gaps = 4/207 (1%)
Query: 150 LERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLI 209
E + +G +PLPPYI K D Y T YAK +GS AAPTAGLH+T LL +
Sbjct: 4 FEEVLDQLGEMPLPPYITHK----LEDRTRYNTVYAKEEGSAAAPTAGLHWTKELLEQCE 59
Query: 210 SIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVG 269
+ G+++ +TLHVG GTF PVK+E+ + H MHSE + A+ + + K RGGR++ G
Sbjct: 60 AKGVEILRITLHVGLGTFRPVKMEEVEKHHMHSEYYSVSQEVAEKIEASKKRGGRVICTG 119
Query: 270 TTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCG 329
TTS R LE+A E G I SG+T+IFI PG+ F+ +D L++NFHLP+STLLMLVSA
Sbjct: 120 TTSCRALESAARESGKIEAKSGWTDIFIYPGFSFKVMDALITNFHLPESTLLMLVSALSS 179
Query: 330 IEETKKMYQHAISHAYRFYSYGDTSLL 356
E+ Y+ A+ YRF+S+GD +
Sbjct: 180 REKILHAYEEAVKEKYRFFSFGDAMFI 206
>gi|153853722|ref|ZP_01995078.1| hypothetical protein DORLON_01069 [Dorea longicatena DSM 13814]
gi|149753472|gb|EDM63403.1| hypothetical protein DORLON_01069 [Dorea longicatena DSM 13814]
Length = 194
Score = 312 bits (801), Expect = 4e-83, Method: Composition-based stats.
Identities = 97/197 (49%), Positives = 126/197 (63%), Gaps = 4/197 (2%)
Query: 160 IPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVT 219
+PLPPYI + D YQT YA GS AAPTAGLHFT LL + G+ + VT
Sbjct: 1 MPLPPYITHQ----LEDKNRYQTVYATHTGSAAAPTAGLHFTPELLEEIKEKGVDIARVT 56
Query: 220 LHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA 279
LHVG GTF PVKV++ +H MHSE ID A+ +N K G R++ VGTTS R +E+A
Sbjct: 57 LHVGLGTFRPVKVDEITEHHMHSEFFMIDEEAAEKINRAKETGHRVICVGTTSCRTVESA 116
Query: 280 TTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQH 339
E+G + SG+T IFI PGY+F+ +D L++NFHLP+STL+MLVSA G E Y+
Sbjct: 117 ADENGHLEAKSGWTQIFIYPGYKFKVLDCLITNFHLPESTLIMLVSALAGREHVLAAYEE 176
Query: 340 AISHAYRFYSYGDTSLL 356
A+ YRF+S+GD +
Sbjct: 177 AVKERYRFFSFGDAMFI 193
>gi|228470155|ref|ZP_04055064.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas uenonis 60-3]
gi|228308293|gb|EEK17148.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas uenonis 60-3]
Length = 425
Score = 312 bits (800), Expect = 5e-83, Method: Composition-based stats.
Identities = 127/424 (29%), Positives = 192/424 (45%), Gaps = 80/424 (18%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+ LP RIA P+ RD RL++ + DH ++LP L + ++ N
Sbjct: 15 INDYDYPLPDERIAAHPLAERDQCRLLL----SDATGRLEDHTFAELPKLLPPHALLIRN 70
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMR------------VSPNSWSVYARPSKVIK 110
NT+VI A++ V+ I + SW SK +
Sbjct: 71 NTRVIKARIFFVKA-----TGARIEILCLDPYKPVSYEESLSSLGSCSWHCLVGNSKKWR 125
Query: 111 KGDIL--HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIAR 168
+ GQ+ + + +S + L G +P+PPY+ R
Sbjct: 126 PEQTISCTLPLAGGQTITLQANREADTPDVVTFSWSDETKSFGEILELCGQLPIPPYLNR 185
Query: 169 KRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFM 228
+ ++ D DYQT YA+I+GSVAAPTAGLHFT L +L++ G ++ +TLHVGAGTF+
Sbjct: 186 E--TESSDLTDYQTVYARIEGSVAAPTAGLHFTPELDDQLLAEGHRITELTLHVGAGTFL 243
Query: 229 PVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA--------- 279
PVK DH MHSE + T + L ++ V +GTTS+R LE+
Sbjct: 244 PVKGRQVADHQMHSEYCSVPTATLETL--LEHIDSPFVPIGTTSVRTLESLYWFAVALQQ 301
Query: 280 -------TTEDGIINPWSGF-----------------------------------TNIFI 297
E ++ W + T + I
Sbjct: 302 AEQEGRDVAEPFHLDQWYSYRMHQSCGASLPSRREALEILLRYVRHKGLDRLTFSTALLI 361
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAIS-HAYRFYSYGDTSLL 356
PGY+++ VDIL++NFH PKSTLL+LVSA G + +Y+HA++ YRF SYGD LL
Sbjct: 362 APGYQYQMVDILVTNFHQPKSTLLLLVSALIG-PHWRTLYEHALADAHYRFLSYGDACLL 420
Query: 357 FQKR 360
+++
Sbjct: 421 YRRE 424
>gi|322379073|ref|ZP_08053476.1| tRNA ribosyltransferase [Helicobacter suis HS1]
gi|322379937|ref|ZP_08054214.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter suis HS5]
gi|321147635|gb|EFX42258.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter suis HS5]
gi|321148565|gb|EFX43062.1| tRNA ribosyltransferase [Helicobacter suis HS1]
Length = 349
Score = 312 bits (799), Expect = 6e-83, Method: Composition-based stats.
Identities = 116/360 (32%), Positives = 183/360 (50%), Gaps = 34/360 (9%)
Query: 4 KEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNN 63
+ + LP IA P+ P++ A+LM+ ++ + + F N IV N+
Sbjct: 18 ASYTYHLPKHLIASHPIKPKEEAKLMIYER---ARNRLTHTTFAHIFEFFPKNALIVLND 74
Query: 64 TKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQ 123
TKVI A+L G + + + +H + + G IL
Sbjct: 75 TKVIKARLFGRK-----KSGHLVEILIHHPKDN---FCLVQIRGKVHVGLILQL-----D 121
Query: 124 SRLEATVIDKWNTGEILLV------FSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
V++ + G L+ + +E+ + ++G +P+PPY+ KR + +D
Sbjct: 122 HGYFCQVLEVLSNGMRLVGFFKESGHFLEWVEVLDMLEILGHMPIPPYL--KRADEIKDL 179
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
DYQ+ +AK G++AAPTA LHF+ + + L+S K F+TLHVGAGTF+ V+ ED +
Sbjct: 180 QDYQSVFAKNLGAIAAPTASLHFSESTKAYLLS-HFKHAFLTLHVGAGTFLGVECEDIRE 238
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
H MHSE I T QAL+ I+ +GTT+LR +E G P N+F+
Sbjct: 239 HGMHSEFVDIPLITQQALDHA----PCILCIGTTALRAVEHYKR--GFKTPH---CNLFL 289
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
G + V L++NFHLP+STL+MLV++ G+++ ++Y+ AI H YRFYSYGD L+
Sbjct: 290 HAGNPVKHVQALLTNFHLPQSTLIMLVASMLGLDKCLELYKQAIKHHYRFYSYGDGMLIL 349
>gi|149921269|ref|ZP_01909725.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Plesiocystis pacifica SIR-1]
gi|149817929|gb|EDM77391.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Plesiocystis pacifica SIR-1]
Length = 365
Score = 311 bits (797), Expect = 1e-82, Method: Composition-based stats.
Identities = 135/371 (36%), Positives = 197/371 (53%), Gaps = 28/371 (7%)
Query: 4 KEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLN-------SN 56
++DF+LP +IA P R +AR+ V+ + V + V L A L+
Sbjct: 5 DDYDFELPTEQIAQAPASERSAARMFVL--AEAGAAVSTHSRVGALEAVLDGVAEARGQR 62
Query: 57 DAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN---SWSVYARPSKVIKKGD 113
IV N+++V+ A+++ R + + + +AR ++ +++G+
Sbjct: 63 PLIVVNDSRVVPARIHVFRA-----TGGRVELLVVDPAALGPGARVRAWARGARRLREGE 117
Query: 114 ILHFFSQDGQ-SRLEATVIDKWNTGE----ILLVFSISGIELERQISLVGTIPLPPYIAR 168
+L G+ + LE + GE VF I +L + VG +PLPPYIAR
Sbjct: 118 VLRLPGAHGETALLELRYLGAEGEGEAADSRARVFEIVRGQLLDALEAVGELPLPPYIAR 177
Query: 169 KRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFM 228
DA D YQT YA+ +GSVAAPTAGLHF + +L RL +V +TLHVG GTF+
Sbjct: 178 PEGPDAADRERYQTLYARHRGSVAAPTAGLHFDAAMLERL-----EVAPITLHVGPGTFL 232
Query: 229 PVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIIN 287
P+ ED H + SE I +A + + ++ G I++VGTT+ R LE+ A G I
Sbjct: 233 PMDTEDVRAHRVGSERYSISEASAARIEAARAEGRPILAVGTTATRTLESVALANGGAIV 292
Query: 288 PWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
P SG T + ITPGYRF VD+L++NFHLP+S+LLMLV G E Y A++ YRF
Sbjct: 293 PGSGRTELVITPGYRFSVVDLLLTNFHLPRSSLLMLVCCLGGRERVLAAYAEAVAAGYRF 352
Query: 348 YSYGDTSLLFQ 358
YSYGD L+ +
Sbjct: 353 YSYGDCMLVER 363
>gi|229495188|ref|ZP_04388923.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas endodontalis ATCC 35406]
gi|229317631|gb|EEN83529.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Porphyromonas endodontalis ATCC 35406]
Length = 445
Score = 309 bits (793), Expect = 3e-82, Method: Composition-based stats.
Identities = 126/415 (30%), Positives = 189/415 (45%), Gaps = 77/415 (18%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
++ +D+ LP RIA P+ R + RL+V I + F+ + ++ N
Sbjct: 49 IESYDYPLPDERIARYPLEDRAACRLLVYRSG-----EIISSQFRQITDFIPEHSLLIRN 103
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSP------------NSWSVYARPSKVIK 110
NT+VI A+++ + +I SP SW ++ K
Sbjct: 104 NTRVIRARIHVQKPS-----GAQIEIMCLEPASPAQYERALSATSGCSWHCLVGNARRWK 158
Query: 111 KGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKR 170
+G + + G++ I++ I ++ +S+VG +P+PPY+ R+
Sbjct: 159 EGALETLVTLPGETDPILFRIERGEGDVIHFSWNSDHCTFGELLSVVGILPIPPYLRRE- 217
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
+ D ++YQT YA+ GSVAAPTAGLHFT L L G+ + +TLHVGAGTFMPV
Sbjct: 218 -TEESDNINYQTVYAQCDGSVAAPTAGLHFTPELFEALKEKGVSLGEITLHVGAGTFMPV 276
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGG---RIVSVGTTSLRLLET--------- 278
K DH MH E+ ++ L GG I++VGTTS+R LE+
Sbjct: 277 KTSKIGDHRMHQEVCRVERGIVAQL-----AGGSYSPIIAVGTTSVRTLESLYLLALNHI 331
Query: 279 ----ATTEDGIINPWSGF-------------------------------TNIFITPGYRF 303
+ W + T + I PGY F
Sbjct: 332 DELGQEDHLPFVTQWEPYETDYPEASMPQVMAALLSKMDSLSLEEVVFSTALLIAPGYTF 391
Query: 304 RAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
R V +++NFH PKSTLL+++SAF G E +++Y +A+SH YRF SYGD SLL
Sbjct: 392 RVVGGMVTNFHQPKSTLLLMISAFLGEE-WERIYDYALSHDYRFLSYGDGSLLLP 445
>gi|256371731|ref|YP_003109555.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Acidimicrobium ferrooxidans DSM 10331]
gi|256008315|gb|ACU53882.1| S-adenosylmethionine/tRNA-ribosyltransferase-iso merase
[Acidimicrobium ferrooxidans DSM 10331]
Length = 349
Score = 309 bits (791), Expect = 5e-82, Method: Composition-based stats.
Identities = 114/354 (32%), Positives = 178/354 (50%), Gaps = 28/354 (7%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
V FD+DLP IA P+ PR +ARL+V ++ V+DL L D +V N
Sbjct: 18 VDAFDYDLPAEAIAHDPIEPRRAARLLVARRG----APVAHARVADLARLLEPGDLVVVN 73
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
+ V+ A+L+ R + L ++ + RP++ ++ G+ L
Sbjct: 74 ESAVVPARLHLQRSS-----GGAVEVLLLRQLPDGTAEALVRPNRRVRAGERLL-----A 123
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
V E + + ++ ++ ER + +G PLPPY+ R+ YQT
Sbjct: 124 DGVEVVEVGGALEAVEGMTIRAVRVLDPERV-ASIGVAPLPPYLGRQDIP----LERYQT 178
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
+A+ GSVAAPTAGLH +L+ L + GI V + LHVG GTF PV H MH+
Sbjct: 179 VFARRPGSVAAPTAGLHLDEVVLADLAARGIDVVRIVLHVGLGTFWPVTAATLAGHPMHA 238
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E +D T + K R+V++GTT +R LET + +G + + I PG+R
Sbjct: 239 ESYEVDPATWARIEGAK----RVVAIGTTVVRTLETVA----LTGELAGESRLLIAPGFR 290
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ VD +++NFH P+STL+ LV+A G + +++Y A++ YRF S+GD L+
Sbjct: 291 LQVVDTVLTNFHQPRSTLIALVAAMVG-DRWRELYSVALAEGYRFLSFGDAMLV 343
>gi|257487220|ref|ZP_05641261.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. tabaci ATCC 11528]
Length = 213
Score = 308 bits (790), Expect = 7e-82, Method: Composition-based stats.
Identities = 107/200 (53%), Positives = 136/200 (68%), Gaps = 3/200 (1%)
Query: 159 TIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFV 218
+PLPPYI RP + D YQT YA+ G+VAAPTAGLHF LL + + G++ FV
Sbjct: 1 KMPLPPYI--DRPDEGADRERYQTVYAQRAGAVAAPTAGLHFDQPLLEAIAAKGVETAFV 58
Query: 219 TLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET 278
TLHVGAGTF PV+VE +DH MHSE + A+ + ++RGGR+++VGTTS+R LE+
Sbjct: 59 TLHVGAGTFQPVRVEQIEDHHMHSEWLEVGQDVVDAVAACRARGGRVIAVGTTSVRSLES 118
Query: 279 ATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQ 338
A DG + P+SG T+IFI PG F VD L++NFHLP+STLLMLVSAF G ET Y
Sbjct: 119 AAR-DGELKPFSGDTDIFIYPGRPFHVVDALVTNFHLPESTLLMLVSAFAGYPETMAAYA 177
Query: 339 HAISHAYRFYSYGDTSLLFQ 358
AI H YRF+SYGD + +
Sbjct: 178 AAIEHGYRFFSYGDAMFITR 197
>gi|255589610|ref|XP_002535022.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase, putative
[Ricinus communis]
gi|223524180|gb|EEF27363.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase, putative
[Ricinus communis]
Length = 266
Score = 308 bits (790), Expect = 8e-82, Method: Composition-based stats.
Identities = 119/268 (44%), Positives = 161/268 (60%), Gaps = 12/268 (4%)
Query: 92 MRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDK-WNTGEILLVFSISGIEL 150
+S + S+ K G +LH +A V+ + + I L+ + S +
Sbjct: 4 RVLSEQEAYAQIKSSRSPKAGSLLHL-----SGDYQAEVLGRQADMFHIRLLGNESWYDF 58
Query: 151 ERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLIS 210
+ G +PLPPYI K DA D YQT +AK G+VAAPTAGLHF LL LI+
Sbjct: 59 ---LEQYGQLPLPPYIEHK--ADAADDTRYQTVFAKHAGAVAAPTAGLHFDEALLQALIN 113
Query: 211 IGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGT 270
G+ V +VTLHVGAGTF PVKV++ +H MHSE+ + T + + ++ G R+ +VGT
Sbjct: 114 KGVHVRYVTLHVGAGTFQPVKVDNIAEHHMHSEVYHLPEETISTILNARANGKRVTAVGT 173
Query: 271 TSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGI 330
TSLR LE+A G + G TNIFITPG+ F+ VD L++NFHLPKSTL+MLVSAF G
Sbjct: 174 TSLRTLESAA-HVGKLFAHHGDTNIFITPGFEFKLVDRLITNFHLPKSTLMMLVSAFGGY 232
Query: 331 EETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+ +K Y HAI +YRF+SYGD L+ +
Sbjct: 233 DLMRKAYAHAIDQSYRFFSYGDAMLITR 260
>gi|237750185|ref|ZP_04580665.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter bilis ATCC 43879]
gi|229374079|gb|EEO24470.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter bilis ATCC 43879]
Length = 376
Score = 308 bits (789), Expect = 9e-82, Method: Composition-based stats.
Identities = 128/388 (32%), Positives = 196/388 (50%), Gaps = 47/388 (12%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +DF LP IA P+ P+++A+L++ H I+ +L ++ + IV
Sbjct: 5 LDLSSYDFTLPNDLIATEPIKPKENAKLLIYHNGK-----ITHTTFYELFNYIPKDYLIV 59
Query: 61 FNNTKVITAQLNGVRFCHINRREKEI----------SCTLHMRVSPNSWSVYARPSKVIK 110
N+T+VI A+L + + + +I H +S N V + K
Sbjct: 60 LNDTRVINARLFANKLSLESLHKTQILNDSILPTKREIFYHKHLSNNLHLVQIK--GKAK 117
Query: 111 KGDILHFFSQDGQSRLEATVIDKWNTG----------------EILLVFSISGIELERQI 154
DI F Q + + V+D + G + LL + E+ +
Sbjct: 118 LHDI--FTLQYNNTNVFIQVVDIKDDGYKIVSFFTLKDISALKQNLLQNHAEKLSQEKVL 175
Query: 155 SLVGT---IPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISI 211
SL+ T IPLPPY+ KR +D DYQ+ +A+ +GSVAAPTA LHF+ ++ L
Sbjct: 176 SLLQTCGNIPLPPYM--KRESTEKDSKDYQSIFARNEGSVAAPTASLHFSESMFKYLKE- 232
Query: 212 GIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTT 271
FVTLHVGAGTF P+ E+ +H +H+E I AQ + K +I+ VGTT
Sbjct: 233 NYNHAFVTLHVGAGTFKPITCENILNHKIHTESCIIAKKEAQKILESK----KILCVGTT 288
Query: 272 SLRLLETATTED--GIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCG 329
++R +E E+ I + G IF+ P + V L++NFHLPKS+LLMLVS+ G
Sbjct: 289 AMRSVEWLIRENVAQIESDIMGENAIFLNPFNPPKKVKALLTNFHLPKSSLLMLVSSIIG 348
Query: 330 IEETKKMYQHAISHAYRFYSYGDTSLLF 357
+ET ++Y+ AI++ YRFYSYGD L+
Sbjct: 349 RKETLRIYEEAIANKYRFYSYGDGMLII 376
>gi|300727139|ref|ZP_07060558.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
bryantii B14]
gi|299775683|gb|EFI72274.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Prevotella
bryantii B14]
Length = 424
Score = 308 bits (789), Expect = 1e-81, Method: Composition-based stats.
Identities = 131/434 (30%), Positives = 201/434 (46%), Gaps = 93/434 (21%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ ++ +DLP RIA P+ RD ++L++ +S+ + ++P L +V
Sbjct: 7 KISDYSYDLPDERIAKFPLSQRDHSKLLLY-----KHGEVSEDVFYNIPNHLPKGALMVC 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------------WSVYARPSKVI 109
NNT+VI A+++ + I L +P W K
Sbjct: 62 NNTRVIQARMHFRKA-----TGALIEVFLMEPAAPTDYELMFQTTGHCAWLCMIGNLKKW 116
Query: 110 KKGDILHFFSQDGQS--------RLEATVIDK----WNTGE----ILLVFSISGIELERQ 153
K+G + FS +G R EA ++ ++G + ++ +
Sbjct: 117 KEGSLKRDFSINGHEFTLVASLRRGEALTPEQEKLTTHSGGTNYWVDFEWNTEKVNFAEI 176
Query: 154 ISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGI 213
+ VG +P+PPY+ R+ D YQT Y+KI+GSVAAPTAGLHFT ++LS L GI
Sbjct: 177 LEAVGELPIPPYLNRE--TQESDKTTYQTVYSKIKGSVAAPTAGLHFTDSVLSDLDKHGI 234
Query: 214 KVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSL 273
VTLHVGAGTF PVK + D H MH+E + T + L ++VGTTS+
Sbjct: 235 VRDEVTLHVGAGTFKPVKSVEIDGHEMHTEYIVVHRHTFERL---LEHDCSAIAVGTTSV 291
Query: 274 RLLET-------------ATTEDGIINPWSGF---------------------------- 292
R LE+ A+ ++ ++ W+ +
Sbjct: 292 RTLESLYYMGVYLEHHPDASEDELHVHQWTPYDDGRDGKLVDGITAVKAMQNILDYLDRN 351
Query: 293 --------TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHA 344
T I I PGY ++ V +L++NFH P+STLL+LVSAF + +K+Y +A+SH
Sbjct: 352 NLEALHSSTQIIIAPGYEYKIVKMLITNFHQPQSTLLLLVSAFLKGD-WRKVYDYALSHE 410
Query: 345 YRFYSYGDTSLLFQ 358
+RF SYGD+SLL
Sbjct: 411 FRFLSYGDSSLLIP 424
>gi|285808237|gb|ADC35771.1| queuosine biosynthesis protein [uncultured bacterium 293]
Length = 310
Score = 307 bits (788), Expect = 1e-81, Method: Composition-based stats.
Identities = 123/317 (38%), Positives = 170/317 (53%), Gaps = 18/317 (5%)
Query: 48 DLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPN--------SW 99
DLPA L D +V N ++VI A+L+G R L SW
Sbjct: 3 DLPALLQPGDLLVLNRSRVIPARLHGRRASGQPA-----EVLLLQPADGEKARGGPRESW 57
Query: 100 SVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGT 159
RP K ++ GD + L G + + +E+ I G
Sbjct: 58 HALLRPGKRLRAGDSISIGD---DLTLHVEDAPAQADGRRRVTLVAARGTVEQAIERDGH 114
Query: 160 IPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVT 219
+PLPPYI +R D + YQT YA+ +GSVAAPTAGLH + + + L + G++ V
Sbjct: 115 VPLPPYI--RRGDTPADRLRYQTIYARERGSVAAPTAGLHLSERVFTALRARGVEWTEVL 172
Query: 220 LHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA 279
LHVG GTF PV+ E +DH + E I A A+ + ++RGGR+V+VGTT++R LE+A
Sbjct: 173 LHVGPGTFQPVRAEQVEDHRLPPEPAVIPEEAAAAVAAARARGGRVVAVGTTAVRALESA 232
Query: 280 TTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQH 339
+DG + P + T++ I PGYRFR VD L++NFHLP+S+LL+LV+AF E Y H
Sbjct: 233 AGDDGRLRPGARETDLVIVPGYRFRVVDALLTNFHLPRSSLLLLVAAFTSRERVLDAYAH 292
Query: 340 AISHAYRFYSYGDTSLL 356
A+ YRFYSYGD LL
Sbjct: 293 AVRAGYRFYSYGDAMLL 309
>gi|282877518|ref|ZP_06286336.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella buccalis ATCC 35310]
gi|281300342|gb|EFA92693.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella buccalis ATCC 35310]
Length = 432
Score = 304 bits (780), Expect = 1e-80, Method: Composition-based stats.
Identities = 128/446 (28%), Positives = 196/446 (43%), Gaps = 109/446 (24%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ ++ +DLP RIA P+ RD ++L++ + + + + L L ++F
Sbjct: 7 HISDYQYDLPDDRIAKFPIAQRDHSKLLLYNQGK-----VGEDVFYHLKDHLPQGALMIF 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS------------WSVYARPSKVI 109
NNTKVI A++ ++ I L +P W K
Sbjct: 62 NNTKVIQARMYFMK-----STGARIEAFLMEPAAPTDYEQIFQTRGHCAWYCMIGNLKKW 116
Query: 110 KKGDILHFFSQDGQS--------------------RLEATVIDKWNTGEILLVFSISGIE 149
K+G + + G+S +L A W I + I
Sbjct: 117 KEGSLARSYEIKGRSLTLTITRKSQQKEDQAEGNLQLSAPATHHW----IEFDWDAEDIS 172
Query: 150 LERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLI 209
+ +G +P+PPY+ R+ D YQT Y+KI+GSVAAPTAGLHFT+++L L
Sbjct: 173 FSEILEDMGELPIPPYLNRE--TQESDKTTYQTVYSKIKGSVAAPTAGLHFTNDVLKSLD 230
Query: 210 SIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVG 269
GI VTLHVGAGTF PVK ++ +DH MH+E + T L + ++VG
Sbjct: 231 EHGIDREEVTLHVGAGTFKPVKSQEIEDHDMHTEYICVHQQT---LEKLLRHDASAIAVG 287
Query: 270 TTSLRLLET-------------ATTEDGIINPWSGF------------------------ 292
TTS+R LE+ A+ + ++ W+ +
Sbjct: 288 TTSVRTLESLYYMGVYLSEHPDASEAELHVSQWAPYERMREDGTTEQLDGGLIDGITSMQ 347
Query: 293 --------------------TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEE 332
T I I PGY ++ V +L++NFH P+STLL+LVSAF +
Sbjct: 348 AIQNVLDYLKRNQLGALHSSTQIIIAPGYEYKIVKMLITNFHQPQSTLLLLVSAFV-HGD 406
Query: 333 TKKMYQHAISHAYRFYSYGDTSLLFQ 358
+K+Y +A++H +RF SYGD+SLL
Sbjct: 407 WRKIYDYALAHDFRFLSYGDSSLLIP 432
>gi|258615069|ref|ZP_05712839.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium DO]
Length = 216
Score = 304 bits (779), Expect = 1e-80, Method: Composition-based stats.
Identities = 111/220 (50%), Positives = 144/220 (65%), Gaps = 6/220 (2%)
Query: 138 EILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAG 197
++ F GI LE + +G +PLPPYI + D YQT YAK GS AAPTAG
Sbjct: 1 GRIIDFEYEGIFLE-ILESLGEMPLPPYIKER----LEDPDRYQTVYAKENGSAAAPTAG 55
Query: 198 LHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNS 257
LHFT LL + + G+++ ++TLHVG GTF PV V+ ++H MHSE + A+ LN
Sbjct: 56 LHFTKELLDEIEAKGVELVYLTLHVGLGTFRPVSVDKIEEHHMHSEFYRLTEEAAERLNQ 115
Query: 258 VKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGYRFRAVDILMSNFHLP 316
V+ GG+IV+VGTTS+R LET T+ +G I SG+T+IFITPGY F+ V+ +NFHLP
Sbjct: 116 VRKNGGKIVAVGTTSIRTLETIGTKFNGEIKADSGWTDIFITPGYEFKVVEAFSTNFHLP 175
Query: 317 KSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
KSTL+MLVSAF G E T YQHAI YRF+S+GD +
Sbjct: 176 KSTLVMLVSAFAGRELTLSAYQHAIEERYRFFSFGDAMFV 215
>gi|312132235|ref|YP_003999575.1| s-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Leadbetterella byssophila DSM 17132]
gi|311908781|gb|ADQ19222.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Leadbetterella byssophila DSM 17132]
Length = 394
Score = 303 bits (777), Expect = 3e-80, Method: Composition-based stats.
Identities = 136/413 (32%), Positives = 186/413 (45%), Gaps = 74/413 (17%)
Query: 1 MMV--KEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDA 58
M + KE+ + L +IA P PRD ++L+V IS + + FL
Sbjct: 1 MKIDIKEYTYPLIEEQIARFPHSPRDESKLLVY-----KDGQISHQIFKQIGDFLPDGAH 55
Query: 59 IVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS-------------WSVYARP 105
+V N+TKVI A+L R + I L + P++ W
Sbjct: 56 LVLNDTKVIPARLYFTR-----QTGALIEIFLLNPLQPSTVLPIVMDETREVVWHCVIGN 110
Query: 106 SKVIKKGDILH--FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLP 163
K K ++L F + +L A + + L + + + G IPLP
Sbjct: 111 KKKWKADEVLEGKFTLEGRSYKLWAK---QGEDNAVALTWEGDW-AFSKVVEAYGNIPLP 166
Query: 164 PYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVG 223
PY+ KR D DYQT Y++ +G+VAAPTAGLHFT + L G+K FVTLHVG
Sbjct: 167 PYL--KRESQESDLTDYQTVYSEHEGAVAAPTAGLHFTDAVFQDLEGRGVKKSFVTLHVG 224
Query: 224 AGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT-- 281
AGTFMPVK E+ +H MHSE + Q LN + ++ I+ VGTTS+R LE+
Sbjct: 225 AGTFMPVKEENALNHPMHSEQIIVSR---QFLNEILAQEDFIIPVGTTSMRSLESMYWWG 281
Query: 282 ---EDGIINPWS---------------------------------GFTNIFITPGYRFRA 305
G P+S G T I I P Y FR
Sbjct: 282 VKLIKGEDQPFSIEKLYPYQDHPPITARESFEALLKEMGDEGQLVGNTEIMIFPSYTFRV 341
Query: 306 VDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
L++NFH P STLL+LV+A G E +K+Y A YRF S+GD+SLL
Sbjct: 342 CKGLITNFHQPTSTLLLLVAALVGEETWRKIYAEAGQQGYRFLSFGDSSLLLP 394
>gi|282879642|ref|ZP_06288373.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella timonensis CRIS 5C-B1]
gi|281306590|gb|EFA98619.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella timonensis CRIS 5C-B1]
Length = 432
Score = 302 bits (775), Expect = 4e-80, Method: Composition-based stats.
Identities = 123/442 (27%), Positives = 195/442 (44%), Gaps = 101/442 (22%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ ++ ++LP RIA P+ RD ++L++ + + + + +L +L ++F
Sbjct: 7 HISDYQYELPDERIAKFPIAQRDHSKLLIYNHGK-----VGEDVFYNLYEYLPQGALMIF 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP------------NSWSVYARPSKVI 109
NNTKVI A+++ + I L P +W K
Sbjct: 62 NNTKVIQARMHFKK-----DTGALIEVFLMEPAMPADYEQIFQSKRHCAWYCMIGNLKKW 116
Query: 110 KKGDILHFFSQDGQS-RLEATVIDKWNTGE---------------ILLVFSISGIELERQ 153
K G + + + +S L+ T + I + +
Sbjct: 117 KSGSLTRIYHINQKSVTLQVTRREPATDEHQPAQGLHATPSTHHWIDFDWDAEDVSFAEI 176
Query: 154 ISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGI 213
+ +G +P+PPY+ R+ D YQT Y+KI+GSVAAPTAGLHFT+++L L GI
Sbjct: 177 LESIGELPIPPYLNRE--TQESDKTTYQTVYSKIKGSVAAPTAGLHFTNSVLQSLDEHGI 234
Query: 214 KVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSL 273
+TLHVGAGTF PVK E+ H MH+E + T L + ++VGTTS+
Sbjct: 235 DREELTLHVGAGTFKPVKSEEIKGHAMHTEYICVHRQT---LEKLLRHNVEAIAVGTTSV 291
Query: 274 RLLET-------------ATTEDGIINPWSGF---------------------------- 292
R LE+ AT ++ + W+ +
Sbjct: 292 RTLESLYYMGVFLETHPDATEDELHVKQWAPYERLHTDGQVEHLDGGLIDNISPKQAIQN 351
Query: 293 ----------------TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKM 336
T I I PGY+++ V +L++NFH P+STLL+LVSAF + + +
Sbjct: 352 VLDYLVRNELESLHSSTQIIIAPGYQYKIVKMLITNFHQPQSTLLLLVSAFVNGD-WRTI 410
Query: 337 YQHAISHAYRFYSYGDTSLLFQ 358
Y +A++H +RF SYGD+SLL
Sbjct: 411 YDYALAHQFRFLSYGDSSLLIP 432
>gi|239994274|ref|ZP_04714798.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Alteromonas
macleodii ATCC 27126]
Length = 227
Score = 302 bits (774), Expect = 5e-80, Method: Composition-based stats.
Identities = 97/226 (42%), Positives = 138/226 (61%), Gaps = 8/226 (3%)
Query: 139 ILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGL 198
+ ++ + + G +PLPPYI RP ++ D YQT Y + G+VAAPTAGL
Sbjct: 3 LFILQFDHDETVLTLLEAHGHMPLPPYI--DRPDESSDKERYQTVYNQKPGAVAAPTAGL 60
Query: 199 HFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSV 258
HF +L+ L G+ + FVTLHVGAGTF PV+V++ +H MH+E + A+ +
Sbjct: 61 HFDDAILAALKEKGVNLAFVTLHVGAGTFQPVRVDNIQEHKMHAEFAEVPQDVVDAVLTT 120
Query: 259 KSRGGRIVSVGTTSLRLLETATTEDGI------INPWSGFTNIFITPGYRFRAVDILMSN 312
K+ G R+++VGTTS+R LE+A I P++ T IFI PG+ F+ VD + +N
Sbjct: 121 KANGKRVIAVGTTSVRSLESAAKASAERGDEEVIAPFNEDTEIFIYPGFEFKVVDAMFTN 180
Query: 313 FHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
FHLP+STL+ML+SAF G E K YQ AI YRF+SYGD+ + +
Sbjct: 181 FHLPESTLMMLISAFAGKENVMKAYQEAIEKEYRFFSYGDSMFIER 226
>gi|288925762|ref|ZP_06419693.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella buccae D17]
gi|315608288|ref|ZP_07883278.1| possible queuine tRNA-ribosyltransferase [Prevotella buccae ATCC
33574]
gi|288337417|gb|EFC75772.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Prevotella buccae D17]
gi|315250069|gb|EFU30068.1| possible queuine tRNA-ribosyltransferase [Prevotella buccae ATCC
33574]
Length = 424
Score = 299 bits (767), Expect = 4e-79, Method: Composition-based stats.
Identities = 128/434 (29%), Positives = 190/434 (43%), Gaps = 93/434 (21%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +++++L RIA P+ PRD ++L++ + + + L L + +VF
Sbjct: 7 RISDYNYELLEERIAKFPIVPRDHSKLLLY-----KHGEVGEDVFYHLTDHLPNRALMVF 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRV------------SPNSWSVYARPSKVI 109
NNT+VI A+++ + I L SW K
Sbjct: 62 NNTRVIQARMHFRKE-----TGALIEVFLMEPAMPTDYELMFQTSGHCSWLCMIGNLKKW 116
Query: 110 KKGDILHFFSQDGQS-RLEATVIDKWNTGEIL---------------LVFSISGIELERQ 153
K+G + F G L AT++ + + +
Sbjct: 117 KEGMLRRNFDIKGNRLTLTATMLRDEQLDDRQKNMTVHGGGTNYWVDFDWDNQQVSFAEI 176
Query: 154 ISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGI 213
+ VG +P+PPY+ R D YQT Y+KI+GSVAAPTAGLHFT ++L+ + GI
Sbjct: 177 LEAVGELPIPPYLN--RATQESDKTTYQTVYSKIKGSVAAPTAGLHFTDDVLADVDRHGI 234
Query: 214 KVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSL 273
VTLHVGAGTF PVK + H MH+E + T + L G ++VGTTS+
Sbjct: 235 VRDEVTLHVGAGTFKPVKSMEIAGHKMHAEYIVVHRHTFERL---LEYGCSAIAVGTTSV 291
Query: 274 RLLET-------------ATTEDGIINPWSGF---------------------------- 292
R LE+ A+ ED + W +
Sbjct: 292 RTLESLYYIGLYLEHHPEASEEDLHVGQWDPYDNGRNGKTVEGITPEQAIRNILSYLDRN 351
Query: 293 --------TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHA 344
T I I PGY ++ V +L++NFH P+STLL+LVSAF + KK+Y +A+ H
Sbjct: 352 GLEALHSSTQIIIAPGYEYKIVKMLITNFHQPQSTLLLLVSAFLKGD-WKKVYDYALKHD 410
Query: 345 YRFYSYGDTSLLFQ 358
+RF SYGD+SLL
Sbjct: 411 FRFLSYGDSSLLIP 424
>gi|149181032|ref|ZP_01859533.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase, queuosine
biosynthesis protein QueA [Bacillus sp. SG-1]
gi|148851316|gb|EDL65465.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase, queuosine
biosynthesis protein QueA [Bacillus sp. SG-1]
Length = 343
Score = 298 bits (763), Expect = 9e-79, Method: Composition-based stats.
Identities = 104/358 (29%), Positives = 171/358 (47%), Gaps = 30/358 (8%)
Query: 8 FDLPPSRIALRPVFPR----DSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNN 63
F++P S A P R D RLMV++ I S LP F+ D +VFNN
Sbjct: 8 FEIPQSLNAKVPAEQRGAGRDDVRLMVMNGE-----EIHHERFSSLPDFMEEGDLLVFNN 62
Query: 64 TKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQ 123
++ I A L G + C+ +E+ L ++ W + GD L +
Sbjct: 63 SRTIPAVLKG-KACN-----REMEIRLSRQLDDQRWEALIW-GGLFSAGDELEL-----K 110
Query: 124 SRLEATVIDKWNT-GEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+ ++A + N + + FSI G++L I G YI +D YQT
Sbjct: 111 NGVKAVITGTGNEKPLVTIDFSIGGVDLIDYIYSYGEPIRYEYIDSPWTLDV-----YQT 165
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
YA + GSV +AG F+ + +L G++ F+TLH G + + + H
Sbjct: 166 AYASVPGSVEMASAGRAFSWRMFEKLKEKGVRTAFLTLHTGLSYYGNDRWPNPQKH---P 222
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I TA+ +N+V+ + GR+++VGTT +R LETA E G ++ G TN++I Y+
Sbjct: 223 EAFHIPEETAKLINAVREKKGRVIAVGTTVVRALETAVDEKGYVSASKGITNLYIQKDYQ 282
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
+A+D L++ H P++T L +++AF Y+ A+ Y ++ +GD +L+F +R
Sbjct: 283 LKAIDGLVTGLHEPEATHLEMLAAFTYEHHLFDAYRQALKKGYLWHEFGDMNLIFAER 340
>gi|167721138|ref|ZP_02404374.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei DM98]
Length = 301
Score = 293 bits (751), Expect = 2e-77, Method: Composition-based stats.
Identities = 98/286 (34%), Positives = 144/286 (50%), Gaps = 17/286 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVH-PNLSCPLVISDHLVSDLPAFLNSNDAI 59
+ + +FDFDLPP IA + R ++RL+ V N S P + D ++LPA + D +
Sbjct: 2 LTLSDFDFDLPPELIAQTALPERSASRLLEVDNTNPSAPPRLVDRRFAELPACVAPGDLL 61
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFN+TKV+ A+ G + +I + + R SK G L
Sbjct: 62 VFNDTKVLKARFFGRKAS-----GGKIEVLIERVTGERTALAQIRASKSPPPGTTLTLAD 116
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ TV ++ L + I G +PLPPYI DA D
Sbjct: 117 A-----FDVTVGERVEPFFTLHFPD----DCLVLIERHGRLPLPPYIEH--APDAADETR 165
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H
Sbjct: 166 YQTVFAANPGAVAAPTAGLHFDDAVLTALEARGVERATLTLHVGAGTFQPVRVENLAEHR 225
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI 285
MHSE + + + + ++RGGR+++VGTTS+R LE A +
Sbjct: 226 MHSESYELTDALVEKIAATRARGGRVIAVGTTSMRALEAAARDAQH 271
>gi|167895801|ref|ZP_02483203.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 7894]
Length = 267
Score = 292 bits (749), Expect = 5e-77, Method: Composition-based stats.
Identities = 98/282 (34%), Positives = 143/282 (50%), Gaps = 17/282 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVH-PNLSCPLVISDHLVSDLPAFLNSNDAI 59
+ + +FDFDLPP IA + R ++RL+ V N S P + D ++LPA + D +
Sbjct: 2 LTLSDFDFDLPPELIAQTALPERSASRLLEVDNTNPSAPPRLVDRRFAELPACVAPGDLL 61
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFN+TKV+ A+ G + +I + + R SK G L
Sbjct: 62 VFNDTKVLKARFFGRKAS-----GGKIEVLIERVTGERTALAQIRASKSPPPGTTLTLAD 116
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ TV ++ L + I G +PLPPYI DA D
Sbjct: 117 A-----FDVTVGERVEPFFTLHFPD----DCLVLIERHGRLPLPPYIEH--APDAADETR 165
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H
Sbjct: 166 YQTVFAANPGAVAAPTAGLHFDDAVLAALEARGVERATLTLHVGAGTFQPVRVENLAEHR 225
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT 281
MHSE + + + + ++RGGR+++VGTTS+R LE A
Sbjct: 226 MHSESYELTDALVEKIAATRARGGRVIAVGTTSMRALEAAAR 267
>gi|167817319|ref|ZP_02448999.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 91]
Length = 266
Score = 292 bits (747), Expect = 8e-77, Method: Composition-based stats.
Identities = 98/281 (34%), Positives = 143/281 (50%), Gaps = 17/281 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVH-PNLSCPLVISDHLVSDLPAFLNSNDAI 59
+ + +FDFDLPP IA + R ++RL+ V N S P + D ++LPA + D +
Sbjct: 2 LTLSDFDFDLPPELIAQTALPERSASRLLEVDNTNPSAPPRLVDRRFAELPACVAPGDLL 61
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFN+TKV+ A+ G + +I + + R SK G L
Sbjct: 62 VFNDTKVLKARFFGRKAS-----GGKIEVLIERVTGERTALAQIRASKSPPPGTTLTLAD 116
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ TV ++ L + I G +PLPPYI DA D
Sbjct: 117 A-----FDVTVGERVEPFFTLHFPD----DCLVLIERHGRLPLPPYIEH--APDAADETR 165
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H
Sbjct: 166 YQTVFAANPGAVAAPTAGLHFDDAVLTALEARGVERATLTLHVGAGTFQPVRVENLAEHR 225
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT 280
MHSE + + + + ++RGGR+++VGTTS+R LE A
Sbjct: 226 MHSESYELTDALVEKIAATRARGGRVIAVGTTSMRALEAAA 266
>gi|167904189|ref|ZP_02491394.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei NCTC 13177]
Length = 267
Score = 291 bits (746), Expect = 9e-77, Method: Composition-based stats.
Identities = 98/281 (34%), Positives = 142/281 (50%), Gaps = 17/281 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVH-PNLSCPLVISDHLVSDLPAFLNSNDAI 59
+ + +FDFDLPP IA + R ++RL+ V N S P + D ++LPA + D +
Sbjct: 2 LTLSDFDFDLPPELIAQTALPERSASRLLEVDNTNPSAPPRLVDRRFAELPACVAPGDLL 61
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFN+TKV+ A+ G + +I + + R SK G L
Sbjct: 62 VFNDTKVLKARFFGRKAS-----GGKIEVLIERVTGERTALAQIRASKSPPPGTTLTLAD 116
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ TV ++ L I G +PLPPYI DA D
Sbjct: 117 A-----FDVTVGERVEPFFTLHFPDNC----LVLIERHGRLPLPPYIEH--APDAADETR 165
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H
Sbjct: 166 YQTVFAANPGAVAAPTAGLHFDDAVLTALEARGVERATLTLHVGAGTFQPVRVENLAEHR 225
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT 280
MHSE + + + + ++RGGR+++VGTTS+R LE A
Sbjct: 226 MHSESYELTDALVEKIAATRARGGRVIAVGTTSMRALEAAA 266
>gi|27462194|gb|AAO15370.1| tRNA ribosyltransferase [Helicobacter bizzozeronii]
Length = 308
Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats.
Identities = 109/335 (32%), Positives = 168/335 (50%), Gaps = 32/335 (9%)
Query: 28 LMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEIS 87
LMV ++ ++ F + +V N+TKVI A+L +++ +
Sbjct: 1 LMVYER---ASNKLTHSTFKEIFDFFPPHALVVLNDTKVIKARLFAH-----TAQKRPVE 52
Query: 88 CTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISG 147
LH SP + A+ ++ G +L + V++ + G +L F G
Sbjct: 53 ILLHHATSPT--ACLAQMRGKVRPGLVLGL-----EGGYSCEVLEVLDNGLRVLSFKHGG 105
Query: 148 IELE-----RQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTS 202
LE + L+G +PLPPY+ KRP +A+D DYQ+ +AK G++AAPTA LHF+
Sbjct: 106 ELLEWAGVLEMLELLGHVPLPPYL--KRPDEAQDLQDYQSVFAKYPGAIAAPTASLHFSQ 163
Query: 203 NLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRG 262
+ L+ K F+TLHVGAGTF+ V+ ED +H MH+E
Sbjct: 164 SAKDHLL-KNFKHVFITLHVGAGTFLSVQSEDIREHPMHAEFCRSLPQAG----LTLDEA 218
Query: 263 GRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLM 322
I+ VGTT+LR E G + P +F+ G + L++NFHLP+STL+M
Sbjct: 219 PYILCVGTTALRATEHYKRGFG-LKP----CELFLHLGNPVKHAQALLTNFHLPESTLIM 273
Query: 323 LVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
LV++ G+++ ++Y+ AI H YRFYSYGD L+
Sbjct: 274 LVASMVGLDKCLELYKIAIEHHYRFYSYGDGMLIL 308
>gi|167920403|ref|ZP_02507494.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei BCC215]
Length = 273
Score = 288 bits (738), Expect = 9e-76, Method: Composition-based stats.
Identities = 97/278 (34%), Positives = 142/278 (51%), Gaps = 17/278 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVH-PNLSCPLVISDHLVSDLPAFLNSNDAI 59
+ + +FDFDLPP IA + R ++RL+ V N S P + D ++LPA + D +
Sbjct: 2 LTLSDFDFDLPPELIAQTALPERSASRLLEVDNTNPSAPPRLVDRRFAELPACVAPGDLL 61
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFN+TKV+ A+ G + +I + + R SK G L
Sbjct: 62 VFNDTKVLKARFFGRKAS-----GGKIEVLIERVTGERTALAQIRASKSPPPGTTLTLAD 116
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ TV ++ L + I G +PLPPYI DA D
Sbjct: 117 A-----FDVTVGERVEPFFTLHFPD----DCLVLIERHGRLPLPPYIEH--APDAADETR 165
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H
Sbjct: 166 YQTVFAANPGAVAAPTAGLHFDDAVLTALEARGVERATLTLHVGAGTFQPVRVENLAEHR 225
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE 277
MHSE + + + + ++RGGR+++VGTTS+R LE
Sbjct: 226 MHSESYELTDALVEKIAATRARGGRVIAVGTTSMRALE 263
>gi|167822431|ref|ZP_02453902.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 9]
Length = 262
Score = 287 bits (735), Expect = 2e-75, Method: Composition-based stats.
Identities = 96/277 (34%), Positives = 141/277 (50%), Gaps = 17/277 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVH-PNLSCPLVISDHLVSDLPAFLNSNDAI 59
+ + +FDFDLPP IA + R ++RL+ V N S P + D ++LPA + D +
Sbjct: 2 LTLSDFDFDLPPELIAQTALPERSASRLLEVDNTNPSAPPRLVDRRFAELPACVAPGDLL 61
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFN+TKV+ A+ G + +I + + R SK G L
Sbjct: 62 VFNDTKVLKARFFGRKAS-----GGKIEVLIERVTGERTALAQIRASKSPPPGTTLTLAD 116
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ TV ++ L + I G +PLPPYI DA D
Sbjct: 117 A-----FDVTVGERVEPFFTLHFPD----DCLVLIERHGRLPLPPYIEH--APDAADETR 165
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H
Sbjct: 166 YQTVFAANPGAVAAPTAGLHFDDAVLAALEARGVERATLTLHVGAGTFQPVRVENLAEHR 225
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLL 276
MHSE + + + + ++RGGR+++VGTTS+R L
Sbjct: 226 MHSESYELTDALVEKIAATRARGGRVIAVGTTSMRAL 262
>gi|167912448|ref|ZP_02499539.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 112]
Length = 262
Score = 286 bits (733), Expect = 3e-75, Method: Composition-based stats.
Identities = 96/277 (34%), Positives = 141/277 (50%), Gaps = 17/277 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVH-PNLSCPLVISDHLVSDLPAFLNSNDAI 59
+ + +FDFDLPP IA + R ++RL+ V N S P + D ++LPA + D +
Sbjct: 2 LTLSDFDFDLPPELIAQTALPERSASRLLEVDNTNPSAPPRLVDRRFAELPACVAPGDLL 61
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFN+TKV+ A+ G + +I + + R SK G L
Sbjct: 62 VFNDTKVLKARFFGRKAS-----GGKIEVLIERVTGERTALAQIRASKSPPPGTTLTLAD 116
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ TV ++ L + I G +PLPPYI DA D
Sbjct: 117 A-----FDVTVGERVEPFFTLHFPD----DCLVLIERHGRLPLPPYIEH--APDAADETR 165
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H
Sbjct: 166 YQTVFAANPGAVAAPTAGLHFDDAVLTALEARGVERATLTLHVGAGTFQPVRVENLAEHR 225
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLL 276
MHSE + + + + ++RGGR+++VGTTS+R L
Sbjct: 226 MHSESYELTDALVEKIAATRARGGRVIAVGTTSMRAL 262
>gi|310814918|ref|YP_003962882.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Ketogulonicigenium vulgare Y25]
gi|308753653|gb|ADO41582.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Ketogulonicigenium vulgare Y25]
Length = 255
Score = 282 bits (722), Expect = 5e-74, Method: Composition-based stats.
Identities = 123/259 (47%), Positives = 173/259 (66%), Gaps = 6/259 (2%)
Query: 101 VYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTI 160
+P + + +G+ + F S RL AT+I + + + L F+++G + + ++ G +
Sbjct: 2 ALIKPLRKLHEGEDIVFTS-----RLSATLIGR-DGDQAKLRFNLTGDDFDAALAEAGQM 55
Query: 161 PLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTL 220
PLPPYIA +R DA+D DYQT +A G+VAAPTA LHF + +++ L + G+ + VTL
Sbjct: 56 PLPPYIAARRAADAQDLQDYQTIWADRPGAVAAPTASLHFDAAVMAALAARGVTLTRVTL 115
Query: 221 HVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT 280
HVGAGTF+PVKV+D H MH+E G + A A + + K+ GGR++ VGTT+LRLLETA
Sbjct: 116 HVGAGTFLPVKVDDIAQHKMHAEWGEVTATAAAEIAATKAAGGRVIPVGTTALRLLETAA 175
Query: 281 TEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHA 340
+ G I PW G T+IFITPG+ FR D L++NFHLPKSTL+MLVS G + + +Y HA
Sbjct: 176 RDTGAIAPWVGETDIFITPGFNFRVADGLVTNFHLPKSTLMMLVSGLMGADRIRAIYDHA 235
Query: 341 ISHAYRFYSYGDTSLLFQK 359
I+ YRF+SYGD SLL K
Sbjct: 236 IAQRYRFFSYGDASLLLPK 254
>gi|289809483|ref|ZP_06540112.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
Length = 195
Score = 279 bits (715), Expect = 3e-73, Method: Composition-based stats.
Identities = 94/195 (48%), Positives = 132/195 (67%), Gaps = 4/195 (2%)
Query: 152 RQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISI 211
++ +G +PLPPYI RP + D YQT Y++ G+VAAPTAGLHF LL+ L
Sbjct: 3 DILNAIGHMPLPPYI--DRPDEDADRELYQTVYSEKPGAVAAPTAGLHFDEPLLAALREK 60
Query: 212 GIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTT 271
G+++ FVTLHVGAGTF PV+V+ +DHIMHSE + A+ + K+RG R+++VGTT
Sbjct: 61 GVEMAFVTLHVGAGTFQPVRVDTIEDHIMHSEYAEVPQEVVDAVLAAKARGNRVIAVGTT 120
Query: 272 SLRLLETA--TTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCG 329
S+R LE+A + +I P+ G T IFI PGY+++ +D L++NFHLP+STL+MLVSAF G
Sbjct: 121 SVRSLESAAQAAKSDLIEPFFGDTQIFIYPGYQYKVIDALITNFHLPESTLIMLVSAFAG 180
Query: 330 IEETKKMYQHAISHA 344
+ T Y+ A+
Sbjct: 181 YQHTMNAYKTAVEQK 195
>gi|167837801|ref|ZP_02464684.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia thailandensis MSMB43]
Length = 253
Score = 278 bits (712), Expect = 9e-73, Method: Composition-based stats.
Identities = 92/269 (34%), Positives = 136/269 (50%), Gaps = 17/269 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ + +FDFDLPP IA + R ++RL+ V N S P + D ++LPA + D +V
Sbjct: 2 LTLSDFDFDLPPELIAQTALPERSASRLLEVD-NTSAPPRLVDRRFAELPACVAPGDLLV 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKV+ A+ G + +I + P + R SK G L
Sbjct: 61 FNDTKVLKARFFGHKAS-----GGKIEVLIERVTGPRTALAQIRASKSPAPGTTLTLADA 115
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ TV ++ L + I G +PLPPYI DA D Y
Sbjct: 116 -----FDVTVGERAEPFFTLHFPD----DCLALIERHGRLPLPPYIEH--TPDATDETRY 164
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT +A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H M
Sbjct: 165 QTVFAANPGAVAAPTAGLHFDDAVLAALDARGVERATLTLHVGAGTFQPVRVENIAEHRM 224
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVG 269
HSE + + + + ++RGGR+++VG
Sbjct: 225 HSESYELTGALVEKIAATRARGGRVIAVG 253
>gi|87301163|ref|ZP_01084004.1| Queuosine biosynthesis protein [Synechococcus sp. WH 5701]
gi|87284131|gb|EAQ76084.1| Queuosine biosynthesis protein [Synechococcus sp. WH 5701]
Length = 316
Score = 276 bits (706), Expect = 4e-72, Method: Composition-based stats.
Identities = 107/316 (33%), Positives = 160/316 (50%), Gaps = 26/316 (8%)
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVS------------PNSWSVYARPSKV 108
N+T+V+ A+L R + + + W RP K
Sbjct: 2 VNDTRVLKARLQARRAS-----GGAVELLVLQPYDSAAPREAAVASSDSCWICLVRPGKR 56
Query: 109 IKKGDILHFFSQDGQSRLEATVIDKWN-TGEILLVFSISGIE---LERQISLVGTIPLPP 164
++ G++L + GQ L V+ +G ++ F I+ +E + G +PLPP
Sbjct: 57 VRPGEVLQLEAA-GQPPLPLEVVALDEASGGRVIRFPPGCIDASSIEALLQRYGAMPLPP 115
Query: 165 YIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
YI D YQT YA G+VAAPTAGLH + LL + + G+ + TLHVG
Sbjct: 116 YIQH---PDPEQESRYQTRYAARPGAVAAPTAGLHLSDELLEAIRARGVAIATATLHVGI 172
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTED 283
GTF P++ ED +HSE I ++ + + RGGR++++GTTS+R LE A
Sbjct: 173 GTFRPLEEEDLSSLDLHSEWVEISQELVDSVAACRRRGGRVIAIGTTSVRSLEGVAALHG 232
Query: 284 GIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISH 343
G + P+ G N+ I PG+RF+ V L++NFHLP+S+LL+LVSA G +Y+ A S
Sbjct: 233 GSLVPFRGPVNLVIQPGFRFQLVQGLLTNFHLPRSSLLLLVSALIGRPRLLDLYEEAKSQ 292
Query: 344 AYRFYSYGDTSLLFQK 359
YRF+SYGD + +
Sbjct: 293 GYRFFSYGDAMWIAPE 308
>gi|297564544|ref|YP_003683516.1| Queuosine biosynthesis protein [Meiothermus silvanus DSM 9946]
gi|296848993|gb|ADH62008.1| Queuosine biosynthesis protein [Meiothermus silvanus DSM 9946]
Length = 362
Score = 275 bits (705), Expect = 5e-72, Method: Composition-based stats.
Identities = 106/378 (28%), Positives = 165/378 (43%), Gaps = 36/378 (9%)
Query: 1 MMVKE--FDFDLPPSRIALRPVF----PRDSARLMVVHPNLSCPLVISDHLVSDLPAFLN 54
M +KE DF LP A P RD RLMV + + + ++P L
Sbjct: 1 MTLKEPSLDFVLPAELEAREPPEARGLERDQVRLMVSYRSSD---RLVHTQFREIPQHLR 57
Query: 55 SNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYAR-----PSKVI 109
+ D +V N + + A L R KE+ L R+ W+V R SK
Sbjct: 58 AGDVLVINTSGTLPAALPATRED-----GKELRLHLSSRLPGGLWTVELRRVEEGASKPF 112
Query: 110 KKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLP-PY--- 165
+G G++ + K E + G L R + P P PY
Sbjct: 113 SEGQAGETLRLPGRASVRLLTRYKLQPSETQVPTPSQGKTLSRLWIATFSFPDPIPYLLE 172
Query: 166 ----IARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLH 221
I + YQ+ Y GS P+AG FT+ +++RL++ G++V + LH
Sbjct: 173 HGQPIRYGYVPRSWPLEFYQSVYTTEMGSAEMPSAGRAFTAEIITRLVAQGVQVAPLLLH 232
Query: 222 VGAGTFMPVKVEDTDDHIMHSE-IGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT 280
G V +DH E + TA+A+N ++ G R+++VGTT +R LET T
Sbjct: 233 TG--------VASLEDHEPPYEEFYRVPPETARAVNQARADGRRVIAVGTTVVRALETVT 284
Query: 281 TEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHA 340
G+++P G+T + ITP RAVD +++ +H PK+T LM++ A G E Y+ A
Sbjct: 285 DVYGVVHPGEGWTQLVITPQRGVRAVDGILTGWHEPKATHLMMLEAIAGREPLAVAYRAA 344
Query: 341 ISHAYRFYSYGDTSLLFQ 358
+ Y ++ +GD L+
Sbjct: 345 LERRYLWHEFGDLHLILP 362
>gi|229814959|ref|ZP_04445297.1| hypothetical protein COLINT_02002 [Collinsella intestinalis DSM
13280]
gi|229809446|gb|EEP45210.1| hypothetical protein COLINT_02002 [Collinsella intestinalis DSM
13280]
Length = 298
Score = 275 bits (703), Expect = 8e-72, Method: Composition-based stats.
Identities = 99/300 (33%), Positives = 145/300 (48%), Gaps = 46/300 (15%)
Query: 99 WSVYARPSKVIKKGDILH------FFSQDGQSRLEATVIDKWNT--GEILLVFSISGI-- 148
W P K +K G+++ + L A ++D + G L+ F G
Sbjct: 2 WECLVNPGKRLKPGNVVEYRAGGLLAPEGAPVVLTAEILDFIDDSKGGRLVRFEPVGENE 61
Query: 149 -----ELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYA-KIQGSVAAPTAGLHFTS 202
L+ I G +PLPPYI D YQT YA + S AAPTAGLHFT
Sbjct: 62 GGVPRTLDEAIHAAGHVPLPPYITGYEG----DPEKYQTVYAMSEEHSAAAPTAGLHFTP 117
Query: 203 NLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRG 262
L+ R+ G V L VG TF V+ +D +H+MH+E + A +A+++ K+ G
Sbjct: 118 ELIQRIKDKGCGWATVELEVGIDTFRLVEEDDPTEHVMHTERYHVPAEVVEAVHATKAAG 177
Query: 263 GRIVSVGTTSLRLLETAT------------------TEDGIINPWSGF--------TNIF 296
R+++VGTT++R LE+A EDG G TN++
Sbjct: 178 HRVIAVGTTAVRSLESAWDAAAPASDPAVTARGFEGREDGADVRGEGDITVREDATTNLY 237
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+ PG F VD L++NFH+P+STL+MLVSA ++ Y+ A+ YRF+S+GD L+
Sbjct: 238 LMPGSTFHVVDALITNFHVPRSTLMMLVSALATRDQIIDAYEEAVREKYRFFSFGDAMLI 297
>gi|330937012|gb|EGH41104.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. pisi str. 1704B]
Length = 243
Score = 272 bits (697), Expect = 4e-71, Method: Composition-based stats.
Identities = 91/262 (34%), Positives = 132/262 (50%), Gaps = 19/262 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S+RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTLDGPTGA---LAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRSSKSPKPGSSILI--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
EA ++ + + L E+ + VG +PLPPYI RP + D Y
Sbjct: 110 --DGGGEAEMVARHDALFELRFAE----EVLPLLERVGHMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA+ G+VAAPTAGLHF LL + + G++ FVTLHVGAGTF PV+VE +DH M
Sbjct: 162 QTVYAQRAGAVAAPTAGLHFDQPLLEAIAAKGVETAFVTLHVGAGTFQPVRVEQIEDHHM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRG 262
HSE + A+ + ++RG
Sbjct: 222 HSEWLEVGQDVVDAVAACRARG 243
>gi|145240771|ref|XP_001393032.1| hypothetical protein ANI_1_2304074 [Aspergillus niger CBS 513.88]
gi|134077556|emb|CAK96700.1| unnamed protein product [Aspergillus niger]
Length = 356
Score = 272 bits (697), Expect = 5e-71, Method: Composition-based stats.
Identities = 105/372 (28%), Positives = 186/372 (50%), Gaps = 31/372 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVF----PRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSN 56
M EF+FDL + PV RDS +++V+ S I + S + +
Sbjct: 1 MKTAEFEFDLDYKVMPHDPVELRGKTRDSGKMIVLDRESSK---IDHAIFSSIGEYFRPG 57
Query: 57 DAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
D +V N++ +++ L F H N+ +++ H + +P K+ L
Sbjct: 58 DLLVLNDSYMLSNTLW---FEHGNKDSLQLTVYGHEP-DGTTIVELKKPEVTFKRAQTLT 113
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISG---IELERQISLVGT-IPLPPYIARKRPI 172
+ +L+ T++D+ + F+ + L++ + + I L P +++P
Sbjct: 114 SLD---EEKLKCTLLDQQPDKLWKVQFTPTELLLPTLDQYGARLDENIHLNPTYWKEKPD 170
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK- 231
Y++ YAK GS+ P+AGLHF+ LL+ + + G+++ ++TLHVGA + V+
Sbjct: 171 A------YRSVYAKKPGSLEIPSAGLHFSHELLAEISAKGVEIAYITLHVGATEILSVRH 224
Query: 232 --VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE---DGII 286
VE+ + H + SE + T+ LN +S G R+++VGTT +R LET T E G I
Sbjct: 225 ISVEEIEKHKVRSEYYEVSERTSAQLNRARSEGRRVIAVGTTVMRTLETITRETGRKGTI 284
Query: 287 NPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHA-Y 345
P G+T+++I PG+ F AVD+L++N H P+S+ ++L +AF G + + Y+ Y
Sbjct: 285 KPQHGWTDLYIYPGFEFNAVDVLLTNLHRPRSSHIVLTAAFAGTDFVMRSYKEIQEKGDY 344
Query: 346 RFYSYGDTSLLF 357
F +GD L+
Sbjct: 345 EFDMFGDCMLIT 356
>gi|256394335|ref|YP_003115899.1| Queuosine biosynthesis protein [Catenulispora acidiphila DSM 44928]
gi|256360561|gb|ACU74058.1| Queuosine biosynthesis protein [Catenulispora acidiphila DSM 44928]
Length = 385
Score = 270 bits (691), Expect = 2e-70, Method: Composition-based stats.
Identities = 104/372 (27%), Positives = 179/372 (48%), Gaps = 37/372 (9%)
Query: 8 FDLPPSRIALRPVF----PRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNN 63
F + +A +P RD RL+V + ++ ++ SDLP L D +V NN
Sbjct: 31 FRVSSDLLARKPAEARGLDRDGVRLLVARGRGADDPEVAHYVFSDLPDVLEPGDLLVVNN 90
Query: 64 TKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF----S 119
+ + A L+ V R +S P++W V R + + G F S
Sbjct: 91 SGTLPAALDAVDPDSGTRVVLHVST--GTPQDPDAWIVELR--RPMADGSTRPFALGPDS 146
Query: 120 QDGQSRLE----------ATVIDKWNTGEILLVFSIS-GIELERQISLVGTIPLPPYIAR 168
QD S ATV L V + G+ + ++ G Y+ R
Sbjct: 147 QDPDSPATPGLRLRVTGGATVTLLRPYTRRLWVARLDLGMSVADYLTRHGRAIRYDYVDR 206
Query: 169 KRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFM 228
PI A YQT +A I GS P+A F++++++RL++ G+ + +TLH G
Sbjct: 207 DWPITA-----YQTVFAAIPGSAEMPSAARPFSTDVVARLVAKGVYIAPITLHTG----- 256
Query: 229 PVKVEDTDDH-IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN 287
V + H ++E + TA+ +N V++RGGR++++GTT++R LE+ E+G ++
Sbjct: 257 ---VASPEAHEKPYAEWYSVPEATAELVNHVRARGGRVIAIGTTAVRALESVADEEGTVH 313
Query: 288 PWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
P G+T + ITP RAVD L++ FH P+++ L++++A G + Y A++ Y +
Sbjct: 314 PGQGWTELIITPQRGVRAVDGLLTGFHEPEASHLLMLTAIAGPRLIRASYDAALAARYLW 373
Query: 348 YSYGDTSLLFQK 359
+ +GD +LL ++
Sbjct: 374 HEFGDVNLLLRR 385
>gi|115399122|ref|XP_001215150.1| predicted protein [Aspergillus terreus NIH2624]
gi|114192033|gb|EAU33733.1| predicted protein [Aspergillus terreus NIH2624]
Length = 375
Score = 269 bits (688), Expect = 4e-70, Method: Composition-based stats.
Identities = 100/374 (26%), Positives = 175/374 (46%), Gaps = 34/374 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVF----PRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSN 56
M EF+FDL + P RDS R++V+ I + S + +
Sbjct: 1 MKTAEFEFDLDSQIMPHDPAEVRGKSRDSGRMIVLDR---SAAKIEHSVFSSIVDYFRPG 57
Query: 57 DAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVI-KKGDIL 115
D +V N++ +++ L + + T++ + V R + K G L
Sbjct: 58 DVLVLNDSYMLSNTLW------FEHGNESVQVTVYGHEPDGTTIVDIRSDQQWVKSGLTL 111
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISG---IELERQISLVGT-IPLPPYIARKRP 171
+ D +L T++++ FS L++ + I L P + P
Sbjct: 112 AAMNND---QLTCTLLEQQPDRLWKAKFSPPELLVPTLDQHGQRLDETIHLNPTTWKSMP 168
Query: 172 IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK 231
Y++ YAK GS+ P+AGLHF+ LL+++ S G+++ ++TLHVGA + V+
Sbjct: 169 ------EAYRSVYAKKAGSLEIPSAGLHFSDALLAQIQSKGVEIAYITLHVGATEVLSVR 222
Query: 232 ---VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI--- 285
E+ ++H + SE + TA +N + G R+++VGTT +R LE+ G
Sbjct: 223 HISEEEIENHKVRSEYFEVADRTAAQINRARVEGRRVIAVGTTVMRTLESLALGKGRKAA 282
Query: 286 INPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQH-AISHA 344
I P G+T+++I PG++F VD+L++N H P+S+ ++L +AF G + + Y A
Sbjct: 283 IQPQDGWTDLYIYPGFKFNVVDVLLTNLHRPRSSHIVLTAAFAGKDLVMRSYDEIAEHGG 342
Query: 345 YRFYSYGDTSLLFQ 358
Y F +GD L +
Sbjct: 343 YEFDMFGDYVYLIR 356
>gi|108805409|ref|YP_645346.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rubrobacter xylanophilus DSM 9941]
gi|108766652|gb|ABG05534.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Rubrobacter xylanophilus DSM 9941]
Length = 365
Score = 267 bits (684), Expect = 2e-69, Method: Composition-based stats.
Identities = 100/366 (27%), Positives = 158/366 (43%), Gaps = 36/366 (9%)
Query: 7 DFDLPPSRIALRPVF----PRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
DF LPP A P RD+ RLMV P ++ DLP FL D +V N
Sbjct: 21 DFRLPPELEASEPPEARGLERDAVRLMVSRPGGG----VAHARFRDLPRFLEPGDLLVVN 76
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYAR--------PSKVIKKGDI 114
+ + A L+ R + L R+ W+V R P G++
Sbjct: 77 TSGTMKAALDARRED-----GAPLELRLSTRLPAGLWTVELRRPAGGATEPFGGASAGEV 131
Query: 115 LHFFSQDGQSRLEATVIDKW--NTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
L G++ L A + + + L + G Y+ + PI
Sbjct: 132 LRL-PGSGRAALHARYRHAGGAESPRLWVATLDLPAPLGEYLERHGRPIRYGYVGEEWPI 190
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
Y+T YA GS P+AG FT +++RL++ G++V + LH G +
Sbjct: 191 -----GYYRTAYATEDGSAEMPSAGRAFTPEVITRLVARGVQVAPLVLHTGVSSLE---- 241
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
D + E + TA+ N + GGR+V+VGTT +R LET + G+++P G+
Sbjct: 242 ---SDEPPYEEFYRVPPETARLANMAREAGGRVVAVGTTVVRALETVSDGRGVVHPGEGW 298
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T + +TP RAVD L++ H P+S+ L ++ A G E + Y A+ Y ++ +GD
Sbjct: 299 TGLVVTPERGVRAVDALVTGLHEPRSSHLAMLEAVAGREHLRLAYDEALKERYLWHEFGD 358
Query: 353 TSLLFQ 358
L+ +
Sbjct: 359 LHLILR 364
>gi|167567923|ref|ZP_02360839.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Burkholderia oklahomensis EO147]
Length = 354
Score = 262 bits (671), Expect = 5e-68, Method: Composition-based stats.
Identities = 93/372 (25%), Positives = 168/372 (45%), Gaps = 33/372 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVF----PRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSN 56
M +FDF L + P RDS R++V+ I + + + L
Sbjct: 1 MKTDDFDFGLDWKAMPTDPAELRGKRRDSGRMIVLDR---AAATIEHTIFATISDRLRPG 57
Query: 57 DAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
D +VFN++ +++ L ++ + + V R S+ + G L
Sbjct: 58 DLLVFNDSYMLSNTLPFRHGNESAH------VIVYGQEPDGTSIVELRSSQSPRPGLTLT 111
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIEL----ERQISLVGTIPLPPYIARKRPI 172
S+L T++ F +G + R TIPL P R RP
Sbjct: 112 ---ATDDSQLSCTLLSPEPNQLWRARFEPAGKLVGVLDRRGWRSDETIPLNPVYWRTRPD 168
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK- 231
Y++ YA+ GS+ P+AGLHF++++L RL G++ ++TLHVGA + V+
Sbjct: 169 A------YRSVYARKPGSLEIPSAGLHFSTDVLRRLADKGVEFAYITLHVGATEILAVRH 222
Query: 232 --VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED---GII 286
++ + H + E + A A +N ++ RI+++GTT++R LE+ +
Sbjct: 223 IDEDEVEQHKVRPEYFEVGAEAAGQINRARAERRRIIAIGTTAMRTLESLAAHGEPGAAL 282
Query: 287 NPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAIS-HAY 345
+G+T ++I PG+ F+ + L++N H P+S+ ++L +AF G + + Y + Y
Sbjct: 283 RAQAGWTQLYIYPGFEFKIANGLLTNLHRPRSSHIVLTAAFAGKDLVMRGYAEILEMGGY 342
Query: 346 RFYSYGDTSLLF 357
F +GD+ L+
Sbjct: 343 EFDMFGDSMLIL 354
>gi|312198818|ref|YP_004018879.1| queuosine biosynthesis protein [Frankia sp. EuI1c]
gi|311230154|gb|ADP83009.1| Queuosine biosynthesis protein [Frankia sp. EuI1c]
Length = 368
Score = 262 bits (669), Expect = 7e-68, Method: Composition-based stats.
Identities = 97/361 (26%), Positives = 159/361 (44%), Gaps = 37/361 (10%)
Query: 8 FDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVI 67
FDLP A P RD RL+V P + SDL L D +V N + +
Sbjct: 35 FDLPAGLEAAAPPPSRDGVRLLVARPGD-----LRHARFSDLGDQLAPGDLVVVNTSGTL 89
Query: 68 TAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKV--------IKKGDILHFFS 119
A + GVR ++ + W V RP+ ++ G+ L +
Sbjct: 90 PAAVAGVRAGGET-----VAVHFATALDDGDWVVEVRPAGEAVTGPVADLRPGEQLALPA 144
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIE--LERQISLVGTIPLPPYIARKRPIDARDY 177
+ TV G+ L + ++ + ++ VG Y+ +PI+A
Sbjct: 145 G-----VRLTVRGPHPAGQRRLWRAYVPVDGGVVAYLAHVGRPIRYSYVPDPQPIEA--- 196
Query: 178 VDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
Y+T + + GS P+AG F++ L++ L+S GI V V LH G + P +
Sbjct: 197 --YRTVFGRDPGSAEMPSAGRPFSTELVTDLVSRGIGVTPVLLHTGVSSQEPGE------ 248
Query: 238 HIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
E + TA+ +N+ + GGR+V+VGTT R LE+A DG + P +G+T++ +
Sbjct: 249 -PPQPERFRVGPQTARLVNATRRWGGRVVAVGTTVTRALESAAAPDGTVRPTAGWTDLVL 307
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
P RAV L++ +H P ++ L L+ A G Y+ A+ Y ++ +GD+ LL
Sbjct: 308 GPDRPARAVTGLVTGWHAPGASHLDLLVAVAGPSLVADAYREAVRARYLWHEFGDSCLLL 367
Query: 358 Q 358
Sbjct: 368 P 368
>gi|167573201|ref|ZP_02366075.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Burkholderia oklahomensis C6786]
Length = 354
Score = 261 bits (667), Expect = 1e-67, Method: Composition-based stats.
Identities = 93/372 (25%), Positives = 168/372 (45%), Gaps = 33/372 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVF----PRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSN 56
M +FDF L + P RDS R++V+ I + + + L
Sbjct: 1 MKTDDFDFGLDWKAMPTDPAELRGKRRDSGRMIVLDR---AAATIEHTIFATISDRLRPG 57
Query: 57 DAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
D +VFN++ +++ L ++ + + V R S+ + G L
Sbjct: 58 DLLVFNDSYMLSNTLPFRHGNESAH------VIVYGQEPDGTSIVELRSSQSPRPGLTLT 111
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIEL----ERQISLVGTIPLPPYIARKRPI 172
S+L T++ F +G + R TIPL P R RP
Sbjct: 112 ---ATDDSQLSCTLLSPEPNQLWRARFEPAGKLVGVLDRRGWRSDETIPLNPVYWRTRPD 168
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK- 231
Y++ YA+ GS+ P+AGLHF++++L RL G++ ++TLHVGA + V+
Sbjct: 169 A------YRSVYARKPGSLEIPSAGLHFSTDVLRRLADKGVEFAYITLHVGATEILAVRH 222
Query: 232 --VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED---GII 286
++ + H + E + A A +N ++ RI+++GTT++R LE+ +
Sbjct: 223 IDEDEVEQHKVRPEYFEVGAKAAGQINRARAERRRIIAIGTTAMRTLESLAAHGEPGAAL 282
Query: 287 NPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAIS-HAY 345
+G+T ++I PG+ F+ + L++N H P+S+ ++L +AF G + + Y + Y
Sbjct: 283 RAQAGWTQLYIYPGFEFKIANGLLTNLHRPRSSHIVLTAAFAGKDLVMRGYAEILEMGGY 342
Query: 346 RFYSYGDTSLLF 357
F +GD+ L+
Sbjct: 343 EFDMFGDSMLIL 354
>gi|167847215|ref|ZP_02472723.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei B7210]
Length = 242
Score = 260 bits (664), Expect = 3e-67, Method: Composition-based stats.
Identities = 85/256 (33%), Positives = 123/256 (48%), Gaps = 17/256 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVH-PNLSCPLVISDHLVSDLPAFLNSNDAI 59
+ + +FDFDLPP IA + R ++RL+ V N S P + D ++LPA + D +
Sbjct: 2 LTLSDFDFDLPPELIAQTALPERSASRLLEVDNTNPSAPPRLVDRRFAELPACVAPGDLL 61
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFN+TKV+ A+ G + +I + + R SK G L
Sbjct: 62 VFNDTKVLKARFFGRKAS-----GGKIEVLIERVTGERTALAQIRASKSPPPGTTLTLAD 116
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ TV ++ L + I G +PLPPYI DA D
Sbjct: 117 A-----FDVTVGERVEPFFTLHFPD----DCLVLIERHGRLPLPPYIEH--APDAADETR 165
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A G+VAAPTAGLHF +L+ L + G++ +TLHVGAGTF PV+VE+ +H
Sbjct: 166 YQTVFAANPGAVAAPTAGLHFDDAVLAALEARGVERATLTLHVGAGTFQPVRVENLAEHR 225
Query: 240 MHSEIGFIDAPTAQAL 255
MHSE + + +
Sbjct: 226 MHSESYELTDALVEKI 241
>gi|218133477|ref|ZP_03462281.1| hypothetical protein BACPEC_01343 [Bacteroides pectinophilus ATCC
43243]
gi|217990852|gb|EEC56858.1| hypothetical protein BACPEC_01343 [Bacteroides pectinophilus ATCC
43243]
Length = 200
Score = 259 bits (662), Expect = 5e-67, Method: Composition-based stats.
Identities = 81/215 (37%), Positives = 106/215 (49%), Gaps = 18/215 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F +DLP IA P+ R ++RLM++ N I + D+ +LN D +V
Sbjct: 2 MELHDFYYDLPQELIAQDPLSDRSASRLMLLDKNTG---EIEHKIFKDIIDYLNPGDCLV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP--NSWSVYARPSKVIKKGDILHFF 118
N+TKVI A+L G R I L R + W V +P K K G + F
Sbjct: 59 INDTKVIPARLIGERV----GTGATIEVLLLKRKEDMKDVWEVLVKPGKKAKIGTKISF- 113
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
G RL A VID G L+ F+ GI E + +G +PLPPYI K +D
Sbjct: 114 ---GDGRLVAEVIDIVEEGNRLIQFTYEGI-FEEILDELGQMPLPPYITHK----LQDKN 165
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGI 213
YQT YAK +GS AAPTAGLHFT LL R+
Sbjct: 166 RYQTVYAKHEGSAAAPTAGLHFTKELLERIQEKRC 200
>gi|297195176|ref|ZP_06912574.1| tRNA ribosyltransferase-isomerase [Streptomyces pristinaespiralis
ATCC 25486]
gi|297152670|gb|EDY66072.2| tRNA ribosyltransferase-isomerase [Streptomyces pristinaespiralis
ATCC 25486]
Length = 415
Score = 259 bits (662), Expect = 6e-67, Method: Composition-based stats.
Identities = 98/362 (27%), Positives = 168/362 (46%), Gaps = 39/362 (10%)
Query: 11 PPSRIALRPVFPR----DSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKV 66
P A P R D RL+V S +S H DLP L + D +V N +
Sbjct: 73 PEELSARVPAEERGSGRDDVRLLV-----SRGTEVSHHGFRDLPGRLRAGDVLVVNTSAT 127
Query: 67 ITAQLNGV-----RFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
+ A ++G H + R + +R + S RP G ++
Sbjct: 128 LAAAVDGRLGGDAVVVHFSTRGDLGRWAVELRRPDGAGSTLPRPGGP--AGAVVRVPGG- 184
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G+ LEA ++ G L ++ + +++ + G Y R +P+ A YQ
Sbjct: 185 GELVLEAPLV----AGGERLWWARASVDVPTLLRRYGRPIRYRYTQRDQPLSA-----YQ 235
Query: 182 TTYA----KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
T +A GS P+A FT+ +++ L+S G++ + LH G V +
Sbjct: 236 TVFALPSPDGSGSAEMPSAARPFTAGVVADLVSRGVQFAPLVLHTG--------VASAEA 287
Query: 238 H-IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H + E + A TA +N+ ++ GGRIV+VGTT++R LE+A +G++ P SG+T++
Sbjct: 288 HEPPYPERFEVPATTAWLVNAARAAGGRIVAVGTTAVRALESAADGEGVVRPVSGWTDLV 347
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+TP RAVD L++ H P+++ L++++A G + Y+ A+ H Y ++ +GD L+
Sbjct: 348 VTPRRGVRAVDGLLTGLHEPEASHLLMLAAVAGRDALTCAYEEALRHRYLWHEFGDVHLI 407
Query: 357 FQ 358
Sbjct: 408 LP 409
>gi|15614774|ref|NP_243077.1| S-adenosylmethionine tRNA ribosyltransferase [Bacillus halodurans
C-125]
gi|10174830|dbj|BAB05930.1| S-adenosylmethionine tRNA ribosyltransferase [Bacillus halodurans
C-125]
Length = 336
Score = 257 bits (657), Expect = 2e-66, Method: Composition-based stats.
Identities = 91/356 (25%), Positives = 147/356 (41%), Gaps = 35/356 (9%)
Query: 8 FDLPPSRIALRPVF----PRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNN 63
F +P A P+ R R++V+ + + + +L D +V N
Sbjct: 7 FSIPDHLNASEPIERQGKQRSDVRMLVLDRDS---HRTFHEPFTAIANYLQQGDVLVLNR 63
Query: 64 TKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQ 123
++ I ++L G + I L W S + GD +
Sbjct: 64 SRTIPSRLIGSLH------GETIELRLSHERRDGLWDGLILSSSELHAGDRIFL-----S 112
Query: 124 SRLEATVIDKWNT-GEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
S L AT+I+K + FS G +L + G YI I DYQT
Sbjct: 113 SSLSATLIEKDEHTPLWRVAFSKRGAQLLEYVYRYGEPIGYEYIKSSLSI-----QDYQT 167
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHS 242
Y+ GSV +AG FT LL+RL G+++ F+ LH G + D H
Sbjct: 168 VYSSAPGSVEMCSAGRPFTWQLLARLKQKGVRIAFLELHTGLSYYENDVWPDPAHH---P 224
Query: 243 EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYR 302
E I T + L +G RI++VGTT +R LET + G T + I GY
Sbjct: 225 EHYHIPKETIEEL----KKGKRIIAVGTTVVRALETYAQTNRS----QGTTTLSIDAGYE 276
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+ L++ FH P+++ L +++AF +E ++Y+ AI Y+++ +GD + +
Sbjct: 277 LQLATGLLTGFHEPQASHLHMLAAFVQEQELFRVYEQAIRQGYQWHEFGDVNFILP 332
>gi|56964908|ref|YP_176639.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase, queuosine
biosynthesis protein QueA [Bacillus clausii KSM-K16]
gi|56911151|dbj|BAD65678.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase, queuosine
biosynthesis protein QueA [Bacillus clausii KSM-K16]
Length = 332
Score = 256 bits (655), Expect = 3e-66, Method: Composition-based stats.
Identities = 109/360 (30%), Positives = 169/360 (46%), Gaps = 39/360 (10%)
Query: 4 KEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNN 63
K D D PP + RD RL+ + I S L L + D +VFNN
Sbjct: 7 KRLDADTPPEKRGQM----RDGVRLLTYWSDSG---RIVHGGFSQLAHQLEAGDVLVFNN 59
Query: 64 TKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSW--SVYARPSKVIKKGDILHFFSQD 121
++ I A+L + I L V +W + SK L F
Sbjct: 60 SRTIPAEL---------KTVDGIRVRLSREVEDGTWDGLILGESSKK------LEFMHG- 103
Query: 122 GQSRLEATVIDKW-NTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L+A V + LVFS S L R++ G + ++AR P+ DY
Sbjct: 104 ----LKALVTGPGTEPPLVRLVFSCSSSRLLRELYRQGDVIRYEHVARSWPL-----QDY 154
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA I GSV P+AG FT +L+ L GI++ FVTLH G + K + +
Sbjct: 155 QTVYASIPGSVEMPSAGRAFTWRMLAHLQKHGIRLAFVTLHAGLSYYGDDKWPNPA---L 211
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG 300
H E I+ A +N K+ GGR+++VGTT +R LETA+ + I P +G T+++++
Sbjct: 212 HPEAFSIEDEQAAIINDAKANGGRVIAVGTTVVRALETASDGN-TIIPQAGVTSLYLSRT 270
Query: 301 YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
+ AVD L++ FH +++ + L+ F G E K +Y+ A++ Y ++ +GD +LL ++
Sbjct: 271 SKLTAVDGLLTGFHEQEASHIDLLQTFAGEEGVKAIYKEAVAKRYLWHEFGDMNLLMRQE 330
>gi|315048551|ref|XP_003173650.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Arthroderma
gypseum CBS 118893]
gi|311341617|gb|EFR00820.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Arthroderma
gypseum CBS 118893]
Length = 354
Score = 254 bits (648), Expect = 2e-65, Method: Composition-based stats.
Identities = 90/378 (23%), Positives = 169/378 (44%), Gaps = 47/378 (12%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSAR----LMVVHPNLSCPLVISDHLVSDLPAFLNSN 56
M +FDFD+ + PV R +R ++V+ ++ I + + +
Sbjct: 1 MKTVDFDFDVTARVMPDDPVELRGKSREDGKMIVLDRSVDA---IIHSGFASICEYFRPG 57
Query: 57 DAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPS--KVIKKGDI 114
D +V N++ V+ L + H + ++ P+ K +K
Sbjct: 58 DLLVLNDSYVLANVLWFK----HGDETTHVGLCGHEPDNTTVVDMFGWPAAAKGLK---- 109
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
+ +L T++++ ++ + I + +R D
Sbjct: 110 ---LTSKNNDKLTCTLLEQLPDQ----LWRAKFEPFDLVIPTLVEF-------GQRIDDI 155
Query: 175 RDYV---------DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAG 225
D Y++ YA GS P+AGLHF+ L++ +++ G++V ++TLHVGA
Sbjct: 156 TDPSVTLWRSTPLAYRSVYANKPGSFNVPSAGLHFSDRLMAEVVAKGVEVAYLTLHVGAT 215
Query: 226 -TF--MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE 282
TF + E+ ++H + SE ++ TA +N + RI++VGTT +R LE+ +
Sbjct: 216 ETFAVRHISEEEIENHTVRSEYFEVEEKTAAQINRAITENRRIIAVGTTVMRTLESLAVK 275
Query: 283 DGI---INPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQH 339
I SG+T+++I PG+ FR VD+L++N H P+S+ ++L +AF G + + Y
Sbjct: 276 QEPKTPIKAQSGWTDLYIFPGFTFRLVDVLLTNLHQPRSSHIVLTAAFAGKDLVMRSYAE 335
Query: 340 AISH-AYRFYSYGDTSLL 356
+ Y F +GD+ L+
Sbjct: 336 ILERGGYEFDMFGDSMLI 353
>gi|300783463|ref|YP_003763754.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Amycolatopsis mediterranei U32]
gi|299792977|gb|ADJ43352.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Amycolatopsis mediterranei U32]
Length = 335
Score = 253 bits (647), Expect = 3e-65, Method: Composition-based stats.
Identities = 93/360 (25%), Positives = 156/360 (43%), Gaps = 37/360 (10%)
Query: 8 FDLPPSRIALRPVF----PRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNN 63
FDLP A P RD RL+V + P + + L L D +V N
Sbjct: 5 FDLPAELSASAPPEARGLSRDEVRLLV-----ASPAGVHHTAFTGLGEHLRPGDLLVVNT 59
Query: 64 TKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVI----KKGDILHFFS 119
+ + A ++ R + + R+ SW V R + G+ L
Sbjct: 60 SGTLPAAVDARR------NGRPVVVHFATRLDDGSWVVELRAPDGPLLDGRPGERLALAG 113
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ L V G L + + IE+ ++ G Y+ R P+ D
Sbjct: 114 DASLTLLAPAV-----PGTARLWRATASIEVRALLAAAGRPIRYGYVPRAWPL-----SD 163
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A+ GS P+A FT L++ L++ G+ + LH G + +
Sbjct: 164 YQTVFAREPGSAEMPSAARPFTPELVTGLVTDGVLFAPLLLHTGVSSPEAAE-------P 216
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
+E + TA ++ V+ RGGR+V+VGTT+ R LE+A + G + G+T + + P
Sbjct: 217 PQAERYRVPPTTAALVSWVRERGGRVVAVGTTAARALESAASA-GRVRAAEGWTELVLGP 275
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
R VD +++ H P+++ L+L+ A G E +K Y+ A+ Y ++ +GD SLL ++
Sbjct: 276 DRPARVVDGIVTGLHAPEASHLLLLEAVAGAEVVQKAYEAAVEERYLWHEFGDVSLLLRR 335
>gi|328471546|gb|EGF42428.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Lactobacillus rhamnosus MTCC 5462]
Length = 167
Score = 252 bits (645), Expect = 5e-65, Method: Composition-based stats.
Identities = 84/167 (50%), Positives = 114/167 (68%), Gaps = 1/167 (0%)
Query: 192 AAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPT 251
AAPTAGLH+T LL ++ G+K+ ++TLHVG GTF PV E+ + H MHSE +
Sbjct: 1 AAPTAGLHWTKELLQKVQDKGVKLVYLTLHVGLGTFRPVVEENIEAHKMHSEFYRLTPEA 60
Query: 252 AQALNSVKSRGGRIVSVGTTSLRLLETATTE-DGIINPWSGFTNIFITPGYRFRAVDILM 310
A LN V+ GGRI++ GTTS+R LE T+ DG I SG+T+IFI PGY+++ VD +
Sbjct: 61 AATLNEVRDNGGRIIATGTTSIRTLEAIGTKFDGAIKADSGWTDIFIKPGYQWKVVDAFI 120
Query: 311 SNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
+NFHLPKSTL+MLV+AF G + Y+HAI YRF+S+GD ++
Sbjct: 121 TNFHLPKSTLVMLVAAFTGRDTILNAYKHAIEEKYRFFSFGDAMFIY 167
>gi|323454146|gb|EGB10016.1| hypothetical protein AURANDRAFT_12238 [Aureococcus anophagefferens]
Length = 328
Score = 252 bits (644), Expect = 6e-65, Method: Composition-based stats.
Identities = 120/356 (33%), Positives = 174/356 (48%), Gaps = 37/356 (10%)
Query: 8 FDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVI 67
+ LP S IA P PR S+RL+V + ++D L + L + ++ N+++V+
Sbjct: 1 YHLPQSSIAKYPASPRGSSRLLV-----AADGELTDSRFEALTSHLPRDALVIVNDSRVV 55
Query: 68 TAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLE 127
A+L + L + A PS + + +
Sbjct: 56 RARLRC------AGPDGAFEVLLLAPADAD-----ADPS---------PLVAARAEGQAW 95
Query: 128 ATVIDKWNTGEILLVFSISG---IELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTY 184
++ + + + + G L + GT P+PPY+ R D YQT Y
Sbjct: 96 RAMLRRSDADGVEADVAFGGCGARTLASLLDAHGTTPVPPYLDRPDDDGDDDA--YQTAY 153
Query: 185 AKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEI 244
A GSVAAPTAGLHFT + + + + + VTLHVGAGTF PV V +DH MH+E
Sbjct: 154 AADAGSVAAPTAGLHFTDGHFAAVAAA-FETHAVTLHVGAGTFRPV-VGRVEDHAMHAER 211
Query: 245 GFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPG--YR 302
+ +AL + G +V+VGTTS R LE+ T+ +S T++ ITP +R
Sbjct: 212 FAVSRACVEALAAAARDGRPVVAVGTTSARALESLATDA---TTFSASTSLCITPDGRWR 268
Query: 303 FRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
FRAVD L++NFH P STLL LV+AF G E K +Y HA++ YRF SYGD L +
Sbjct: 269 FRAVDHLVTNFHHPDSTLLSLVAAFVGEEPAKDLYAHALAGGYRFLSYGDACYLSR 324
>gi|116204341|ref|XP_001227981.1| hypothetical protein CHGG_10054 [Chaetomium globosum CBS 148.51]
gi|88176182|gb|EAQ83650.1| hypothetical protein CHGG_10054 [Chaetomium globosum CBS 148.51]
Length = 346
Score = 252 bits (644), Expect = 7e-65, Method: Composition-based stats.
Identities = 90/363 (24%), Positives = 164/363 (45%), Gaps = 36/363 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSAR----LMVVHPNLSCPLVISDHLVSDLPAFLNSN 56
M +EFDF+ P + PV R +R ++V+ + + S + F
Sbjct: 1 MRTEEFDFEWDPKAMPQDPVSLRGKSRESGKMLVLDRSTEASK---HTVFSTICDFFRPG 57
Query: 57 DAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVI-KKGDIL 115
D +V N++ +++ L ++ T++ N+ V P + G
Sbjct: 58 DLLVLNDSYMLSNTLKFH------ANGTDVHVTVYGHEQDNTAIVSIEPDQPWIAPGAT- 110
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIEL-ERQISLVGT-----IPLPPYIARK 169
+ + L +++ + L IEL + L G +PL P +
Sbjct: 111 --MTSTDEPALSCHLLEPQQGEDGLWRAQYEPIELLMPTLELYGHRLDETVPLNPGHWKN 168
Query: 170 RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
DY+ YAK GS+ P+AGLHF+ +L + + G+++ ++TLHVGA +
Sbjct: 169 S------RKDYRAVYAKTPGSLEIPSAGLHFSKAILDQAVDKGVEIAYITLHVGATETLA 222
Query: 230 VK---VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGI- 285
++ E+ ++H + SE + A ++ ++ G R+++VGTT +R LET
Sbjct: 223 IRHISEEEIENHKVRSEYFEVGETAAAQISKARAEGRRVIAVGTTVMRTLETLAQGKNKR 282
Query: 286 --INPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQH-AIS 342
+ G+T ++I PG+ FRAVD+L++N H P+S+ ++L +AF G + + Y A
Sbjct: 283 APLPAQKGWTGLYIYPGFDFRAVDVLLTNLHRPRSSHIVLTAAFAGKDFVMRCYDEIAER 342
Query: 343 HAY 345
Y
Sbjct: 343 GDY 345
>gi|271962077|ref|YP_003336273.1| S-adenosylmethionine tRNA ribosyltransferase [Streptosporangium
roseum DSM 43021]
gi|270505252|gb|ACZ83530.1| S-adenosylmethionine tRNA ribosyltransferase [Streptosporangium
roseum DSM 43021]
Length = 371
Score = 252 bits (644), Expect = 7e-65, Method: Composition-based stats.
Identities = 101/377 (26%), Positives = 151/377 (40%), Gaps = 44/377 (11%)
Query: 8 FDLPPSRIALRPVF----PRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNN 63
F LP A P RD RL+V H I+ H ++LP L+ D +V NN
Sbjct: 13 FVLPHDLEAHEPPEARGLTRDGVRLLVSHGATG---EITHHGFAELPGLLHPGDLLVVNN 69
Query: 64 TKVITAQLNGVR---FCHINRREKEISCTLHMRVSPNSWSVYA----------RPSKVIK 110
+ + A + R R + L R+ S RP
Sbjct: 70 SATLPAAVRLDRLAVHFSTEREDGTWLVELRRRMERRSGPGGGGAGQDARDRRRPGTAPA 129
Query: 111 KGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQ---------ISLVGTIP 161
G + G + E G L + L R + G
Sbjct: 130 AGTEMASEPYPGGAAGEWL---PLPGGATLRLLDRETPRLWRARLDREVPAYLRRYGVPI 186
Query: 162 LPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLH 221
Y+ R P+ DYQT + GS P+AG FT+ L++ L+S GI V +TLH
Sbjct: 187 RYSYVERDWPL-----EDYQTVFGIRPGSAEMPSAGRPFTAELVTGLVSRGIGVAPITLH 241
Query: 222 VGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT 281
G + TD+ E + TA+ + GGR+++VGTT +R LETA
Sbjct: 242 TGVTS------PSTDEPPC-PEWFEVSEATARQAELTRESGGRVIAVGTTVVRALETAAL 294
Query: 282 EDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAI 341
G + G+T+ +TP RAV+ L++ H P+S+ L ++SA G E + Y A+
Sbjct: 295 ACGRVRAARGWTSHLVTPSAGVRAVNGLITGLHGPRSSHLPMLSAIAGGELLSRSYAEAL 354
Query: 342 SHAYRFYSYGDTSLLFQ 358
Y ++ +GD L+ Q
Sbjct: 355 GEGYLWHEFGDVHLILQ 371
>gi|297198724|ref|ZP_06916121.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces sviceus ATCC 29083]
gi|197715395|gb|EDY59429.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces sviceus ATCC 29083]
Length = 358
Score = 252 bits (643), Expect = 9e-65, Method: Composition-based stats.
Identities = 93/368 (25%), Positives = 160/368 (43%), Gaps = 43/368 (11%)
Query: 9 DLPPSRIALRPVF------PRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+P A P RD+ RL+V S +S H +LP L + D +V N
Sbjct: 6 HVPEELSARVPAEQRGPGLDRDAVRLLV-----SRSTEVSHHAFGELPRLLRAGDLLVVN 60
Query: 63 NTKVITAQLNGV-----RFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+ + A ++G H + R + + +R + AR G +
Sbjct: 61 TSPTLAAAVDGRIRHARVVVHFSTRGDDGRWAVELRDPDGRGTTRARAGGP--AGTEVRL 118
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDY 177
G RL I + L + G E+ + G Y R +P+
Sbjct: 119 ---PGGGRL----ILEEAVSGRLWWARVCGGEVLGLLREHGRPIRYSYTERDQPLSV--- 168
Query: 178 VDYQTTYA----KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVE 233
YQT +A GS P+A FT+ L++ L+S G++ VTLH G V
Sbjct: 169 --YQTVFALPSPDGAGSAEMPSAARPFTARLVAELVSRGVQFAPVTLHTG--------VA 218
Query: 234 DTDDH-IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+ H + E + +A+ +N+ K+ GR+V+VGTT++R +E+A DG++ +G+
Sbjct: 219 SAEAHEPPYPERFSVPEASARLINAAKAGDGRVVAVGTTAVRAVESAAGADGVVRARAGW 278
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T++ +TP R VD L++ H P+++ L+++ A G + Y+ A+ Y ++ +GD
Sbjct: 279 TDLVVTPERGVRVVDGLLTGLHEPEASHLLMLEAVAGRAAIDRGYEEALRRNYLWHEFGD 338
Query: 353 TSLLFQKR 360
LL +
Sbjct: 339 VHLLLPQE 346
>gi|322701657|gb|EFY93406.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Metarhizium acridum CQMa 102]
Length = 324
Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats.
Identities = 94/367 (25%), Positives = 162/367 (44%), Gaps = 55/367 (14%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSAR----LMVVHPNLSCPLVISDHLVSDLPAFLNSN 56
M +EFD+++ + PV R +R ++V+ + +I+ + S + +
Sbjct: 1 MRTEEFDYNVDSRFVPDDPVELRGKSRESGKMVVLDRSTG---MIAHTVFSTICQYFRPG 57
Query: 57 DAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
D +V N++ V+ L + H V+ P L
Sbjct: 58 DLLVLNDSYVLANVLWFR----YGDESTHVGLCGHEPDGTTIVDVFGWPLATP----ALT 109
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
S++ RL T+++ L Q+ + PL
Sbjct: 110 LTSKN-NDRLTCTLLE----------------ALPDQLWRARSAPLA------------- 139
Query: 177 YVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAG-TF--MPVKVE 233
Y++ YA GS P+AGLHF+ LL+ ++ G++V +TLHVGA TF +
Sbjct: 140 ---YRSVYANTPGSFNIPSAGLHFSEALLAEAVAKGVEVAHITLHVGATETFAVRHITER 196
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED---GIINPWS 290
+ ++H + SE + A +N S G R+V+VGTT +R LET + I S
Sbjct: 197 EIENHKVRSEYFQVGDKAAAQINRAVSEGRRVVAVGTTVMRTLETLAAKQEPKAPIQAQS 256
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAIS-HAYRFYS 349
G+T+++I PG+ F+ VD+L++N H P+S+ ++L +AF G E + Y + Y F
Sbjct: 257 GWTDLYIYPGFNFKLVDVLLTNLHQPRSSHIVLTAAFAGKELVMRSYAEILEGGGYEFDM 316
Query: 350 YGDTSLL 356
+GD+ L+
Sbjct: 317 FGDSMLI 323
>gi|200389557|ref|ZP_03216168.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|199602002|gb|EDZ00548.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
Length = 359
Score = 251 bits (641), Expect = 2e-64, Method: Composition-based stats.
Identities = 93/383 (24%), Positives = 168/383 (43%), Gaps = 50/383 (13%)
Query: 1 MMVKEFDFDLPPSR-IALRPVFP-----RDSARLMVVHPNLSCPLVISDHLVSDLPAFLN 54
M+ +++DF + I LRP + R+ +++V++ + I S L ++
Sbjct: 1 MLTEKYDFRITDQMTIPLRPHWIANDSYREKCKMLVLNRSKG---EIHKVDFSKLTDYIK 57
Query: 55 SNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
D I FN++ +I F R+ + I L + N + + + D+
Sbjct: 58 EGDVICFNDSTII-----NHMFICKTRQNRLIKIVLEGFLPNNRVIISGLLKERLNANDV 112
Query: 115 LHFFSQDG-----------QSRLEATVIDKWNTGEILLVFSISGIELERQIS--LVGTIP 161
+ +S+ A V N ++ + G L+ + L P
Sbjct: 113 FYLVDNPEISIKIEQRFSEESQYRAVVE---NHEALICYLASHGERLDEYVDSSLFYKYP 169
Query: 162 LPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLH 221
Y++ ++K GS+ P+AG+HFT +L+ R+ G + F+TLH
Sbjct: 170 ----------------DAYRSVFSKKYGSLEIPSAGIHFTWDLIQRIKDKGGLISFITLH 213
Query: 222 VGAGTF---MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET 278
V + ++ + ++ +H E + TA +N+ K GGRI +VGTT R LE+
Sbjct: 214 VASTEMLSNRKIQTKCVEEVTIHEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLES 273
Query: 279 A-TTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMY 337
A + E + SG+T ++I PGY+ + VD L++N H PK+T ++L F G++ K Y
Sbjct: 274 AYSREHNCLKASSGWTALYIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLMKAY 333
Query: 338 QHAISHAYRFYSYGDTSLLFQKR 360
+ +F +GD L+ Q
Sbjct: 334 ASEDIQSCQFDMFGDCMLIIQDE 356
>gi|111017236|ref|YP_700208.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhodococcus
jostii RHA1]
gi|110816766|gb|ABG92050.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhodococcus
jostii RHA1]
Length = 352
Score = 250 bits (640), Expect = 2e-64, Method: Composition-based stats.
Identities = 91/370 (24%), Positives = 160/370 (43%), Gaps = 41/370 (11%)
Query: 4 KEFDFDLPPSRIALRPVFPR----DSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAI 59
EF F LP A P R DS R++V + DLP FL D +
Sbjct: 10 AEFRFVLPQRLEASGPPESRGLLRDSVRMLVSDRGR-----VEHSRFHDLPRFLRPGDVV 64
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSK-------VIKKG 112
V N + + A ++G + ++ W+V R I G
Sbjct: 65 VVNASSTLAAAVDGTVDAV-----GPVVVHFSTDLADGDWAVEVRAPGPVSGALDTIAAG 119
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGE-ILLVFSISGIEL--ERQISLVGTIPLPPYIARK 169
+ + AT++ W G L SI G+ ++ G Y+ +
Sbjct: 120 TRIILPRG-----VVATLVKPWPLGSTRLWRASIDGVADVAAELLATSGRPITYAYVHER 174
Query: 170 RPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMP 229
P+ + YQT + + GS +A FT ++++ L + G+ V + LH G + P
Sbjct: 175 WPLSS-----YQTIFGRTGGSAEMASAARPFTHSMVTDLATSGVVVAPILLHTGVSS--P 227
Query: 230 VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPW 289
+ E E + TA+ +N ++ GGR+++VGTT R LETA T G+
Sbjct: 228 ERGEPPI-----PERFEVPEQTARLVNDRRAAGGRVIAVGTTVTRALETAATSGGMAVAG 282
Query: 290 SGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYS 349
+G+T++ ++ G VD L++ +H P ++ LML+ + G + ++ Y A++ Y ++
Sbjct: 283 AGWTDLVLSAGRPTLVVDGLITGWHAPGASHLMLLESVVGEKAVRRAYDEALARGYLWHE 342
Query: 350 YGDTSLLFQK 359
+GD++LL ++
Sbjct: 343 FGDSALLLRR 352
>gi|238911778|ref|ZP_04655615.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Tennessee str. CDC07-0191]
Length = 359
Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats.
Identities = 93/383 (24%), Positives = 170/383 (44%), Gaps = 50/383 (13%)
Query: 1 MMVKEFDFDLPPSR-IALRPVFP-----RDSARLMVVHPNLSCPLVISDHLVSDLPAFLN 54
M+ +++DF + I LRP + R+ +++V++ + I S + ++
Sbjct: 1 MLTEKYDFRITDQMTIPLRPHWIANDSYREKCKMLVLNRSKG---EIHKVDFSKVTDYIK 57
Query: 55 SNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
D I FN++ +I F RR + I L + N + + + D+
Sbjct: 58 EGDVICFNDSTII-----NHMFICKTRRNRLIKIVLEGFLPNNRVIISGLLKERLNANDV 112
Query: 115 LHFFSQD-----------GQSRLEATVIDKWNTGEILLVFSISGIELERQIS--LVGTIP 161
+ G+S+ A V N ++ + G L+ + L P
Sbjct: 113 FYLVDNPEISIKIEQRFSGESQYRAVVE---NHEALICYLASHGERLDEYVDSSLFYKYP 169
Query: 162 LPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLH 221
Y++ ++K GS+ P+AG+HFT +L+ + G + F+TLH
Sbjct: 170 ----------------DAYRSVFSKKYGSLEIPSAGIHFTWDLIQTIKDKGGLISFITLH 213
Query: 222 VGAGTFMP---VKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET 278
V + +P ++ + ++ ++ E + TA +N+ K GGRI +VGTT R LE+
Sbjct: 214 VASTEMLPNRKIQTKCVEEVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLES 273
Query: 279 A-TTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMY 337
A + E + SG+T ++I PGY+ + VD L++N H PK+T ++L F G++ K Y
Sbjct: 274 AYSREHNCLKASSGWTALYIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLMKAY 333
Query: 338 QHAISHAYRFYSYGDTSLLFQKR 360
+ +F +GD L+ Q
Sbjct: 334 ASEDIQSCQFDMFGDCMLIIQDE 356
>gi|204927616|ref|ZP_03218817.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|204322958|gb|EDZ08154.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
Length = 357
Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats.
Identities = 93/383 (24%), Positives = 169/383 (44%), Gaps = 50/383 (13%)
Query: 1 MMVKEFDFDLPPSR-IALRPVFP-----RDSARLMVVHPNLSCPLVISDHLVSDLPAFLN 54
M+ +++DF + I LRP + R+ +++V++ + I S + ++
Sbjct: 1 MLTEKYDFRITDQMTIPLRPHWIANDSYREKCKMLVLNRSKG---EIHKVDFSKVTDYIK 57
Query: 55 SNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
D I FN++ +I F RR + I L + N + + + D+
Sbjct: 58 EGDVICFNDSTII-----NHMFICKTRRNRLIKIVLEGFLPNNRVIISGLLKERLNANDV 112
Query: 115 LHFFSQDG-----------QSRLEATVIDKWNTGEILLVFSISGIELERQIS--LVGTIP 161
+ G +S+ A V N ++ + G L+ + L P
Sbjct: 113 FYLVDNPGISIKIEQKFSEESQYRAVVE---NHEALICYLASHGERLDEYVDSSLFYKYP 169
Query: 162 LPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLH 221
Y++ ++K GS+ P+AG+HFT +L+ R+ G + F+TLH
Sbjct: 170 ----------------DAYRSVFSKKYGSLEIPSAGIHFTWDLIQRIKDKGGLISFITLH 213
Query: 222 VGAGTF---MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET 278
V + ++ + ++ ++ E + TA +N+ K GGRI +VGTT R LE+
Sbjct: 214 VASTEMLSNRKIQTKCVEEVTINEEYYEVSQATADIINTAKQNGGRIFAVGTTVTRCLES 273
Query: 279 A-TTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMY 337
A + E + SG+T ++I PGY+ + VD L++N H PK+T ++L F G++ K Y
Sbjct: 274 AYSREHNCLKASSGWTALYIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLMKAY 333
Query: 338 QHAISHAYRFYSYGDTSLLFQKR 360
+ +F +GD L+ Q
Sbjct: 334 ASEHIQSCKFDMFGDCMLIIQDE 356
>gi|302561407|ref|ZP_07313749.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces griseoflavus Tu4000]
gi|302479025|gb|EFL42118.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces griseoflavus Tu4000]
Length = 347
Score = 250 bits (638), Expect = 3e-64, Method: Composition-based stats.
Identities = 88/364 (24%), Positives = 161/364 (44%), Gaps = 41/364 (11%)
Query: 11 PPSRIALRPVF------PRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
P A PV RDS RL+V S +S H +LP L + D +V N +
Sbjct: 8 PEELSARVPVEQRGPGLDRDSVRLLV-----SRGTAVSHHAFMELPRLLRAGDLLVVNTS 62
Query: 65 KVITAQL-----NGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
+ A + +G H + R + + +R + AR G +
Sbjct: 63 PTLAAAVGGWIGHGRVVVHFSTRGDDGRWAVELRDPDGHGTTRARAG--APAGTEVRL-- 118
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ + + + L ++ + ++ + G Y R +P+ A
Sbjct: 119 ---AGGVRLVLEEPLSARGERLWWARASGDVRGALREYGRPIRYAYTERDQPLSA----- 170
Query: 180 YQTTYA----KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
YQT +A GS P+AG FT+ +++ L+S G++ VTLH G V
Sbjct: 171 YQTVFALPSPDGAGSAEMPSAGRPFTARMVTELVSRGVQFAPVTLHCG--------VASQ 222
Query: 236 DDHIMHS-EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
+ H E + +A+ + +V++ GGR+++VGTT++R +E+A DG++ +G+T+
Sbjct: 223 EAHEPPYAERFVVPEASARLIGAVRAGGGRVIAVGTTAVRAVESAAGADGVVRARAGWTD 282
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
+ +TP R VD L++ H P+++ L+++ A G + Y+ A+ Y ++ +GD
Sbjct: 283 LVVTPERGVRVVDGLLTGLHEPEASHLLMLEAVAGRAAVGRGYEEALGGRYLWHEFGDVH 342
Query: 355 LLFQ 358
L+
Sbjct: 343 LVLP 346
>gi|322707256|gb|EFY98835.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Metarhizium anisopliae ARSEF 23]
Length = 354
Score = 250 bits (638), Expect = 4e-64, Method: Composition-based stats.
Identities = 93/376 (24%), Positives = 162/376 (43%), Gaps = 43/376 (11%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSAR----LMVVHPNLSCPLVISDHLVSDLPAFLNSN 56
M +EFD+++ + PV R +R ++V+ + I+ + S + +
Sbjct: 1 MRTEEFDYNVDSRIVPDDPVELRGKSREDGKMVVLDRSTDK---ITHTVFSTICQYFRPG 57
Query: 57 DAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILH 116
D +V N++ V+ L + H V+ P L
Sbjct: 58 DLLVLNDSYVLANVLWFR----YGDETTHVGLCGHEPDGTTIVDVFGWPLAAP----ALT 109
Query: 117 FFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARD 176
S++ RL T+++ + + +R D D
Sbjct: 110 LTSKN-NDRLTCTLLEALPDQLWRARLE----PFDLVTPTLVEF-------GQRVDDITD 157
Query: 177 YVD---------YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAG-T 226
Y++ YA GS P+AGLHF+ LL+ ++ G++V +TLHVGA T
Sbjct: 158 PNLTLWRSAPLAYRSVYANTPGSFNIPSAGLHFSEALLAEAVAKGVEVAHITLHVGATET 217
Query: 227 F--MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE-- 282
F + ++ ++H + SE + A +N S G R+V+VGTT +R LET +
Sbjct: 218 FAVRHITEKEVENHKVRSEYFQVGDRAAAQINRAVSGGRRVVAVGTTVMRTLETLAAKLE 277
Query: 283 -DGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAI 341
I SG+T+++I PG+ F+ VD+L++N H P+S+ ++L +AF G E + Y +
Sbjct: 278 PKAPIQAQSGWTDLYIYPGFNFKLVDVLLTNLHQPRSSHIVLTAAFAGKELVMRSYAEIL 337
Query: 342 S-HAYRFYSYGDTSLL 356
Y F +GD+ L+
Sbjct: 338 EGGGYEFDMFGDSMLI 353
>gi|289677976|ref|ZP_06498866.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. syringae FF5]
Length = 179
Score = 249 bits (637), Expect = 4e-64, Method: Composition-based stats.
Identities = 86/163 (52%), Positives = 111/163 (68%), Gaps = 1/163 (0%)
Query: 196 AGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQAL 255
AG HF LL + + G++ FVTLHVGAGTF PV+VE +DH MHSE + A+
Sbjct: 2 AGRHFDQPLLEAIAAKGVETAFVTLHVGAGTFQPVRVEQIEDHHMHSEWLEVGQDVVDAV 61
Query: 256 NSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHL 315
+ ++RGGR+++VGTTS+R LE+A DG + P+SG T+IFI PG F VD L++NFHL
Sbjct: 62 AACRARGGRVIAVGTTSVRSLESAAR-DGELKPFSGDTDIFIYPGRPFHVVDALVTNFHL 120
Query: 316 PKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
P+STLLMLVSAF G ET Y AI H YRF+SYGD + +
Sbjct: 121 PESTLLMLVSAFAGYPETMAAYAAAIEHGYRFFSYGDAMFITR 163
>gi|167549997|ref|ZP_02343755.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
gi|205325017|gb|EDZ12856.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA29]
Length = 359
Score = 249 bits (636), Expect = 6e-64, Method: Composition-based stats.
Identities = 91/383 (23%), Positives = 168/383 (43%), Gaps = 50/383 (13%)
Query: 1 MMVKEFDFDLPPSR-IALRPVFP-----RDSARLMVVHPNLSCPLVISDHLVSDLPAFLN 54
M+ +++DF + I LRP + R+ +++V++ + + S L ++
Sbjct: 1 MLTEKYDFRITDQMTIPLRPHWIANDSYREKCKMLVLNRSKGEIHKVE---FSKLTDYIK 57
Query: 55 SNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
D I FN++ +I F R+ + I L + N + + + D+
Sbjct: 58 EGDVICFNDSTII-----NHMFICKTRQNRLIKIVLEGFLPNNRVIISGLLKERLNANDV 112
Query: 115 LHFFSQDG-----------QSRLEATVIDKWNTGEILLVFSISGIELERQIS--LVGTIP 161
+ +S+ A V N ++ + G L+ + L P
Sbjct: 113 FYLVDNPEISIKIEQRFSEESQYRAVVE---NHEALICYLASHGERLDEYVDSSLFYKYP 169
Query: 162 LPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLH 221
Y++ ++K GS+ P+AG+HFT +L+ R+ G + F+TLH
Sbjct: 170 ----------------DAYRSVFSKKYGSLEIPSAGIHFTWDLIQRIKDKGGLISFITLH 213
Query: 222 VGAGTF---MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET 278
V + ++ + ++ ++ E + TA +N+ K GGRI +VGTT R LE+
Sbjct: 214 VASTEMLSNRKIQTKCVEEVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLES 273
Query: 279 A-TTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMY 337
A + E + SG+T ++I PGY+ + VD L++N H PK+T ++L F G++ K Y
Sbjct: 274 AYSREHNCLKASSGWTALYIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLMKAY 333
Query: 338 QHAISHAYRFYSYGDTSLLFQKR 360
+ +F +GD L+ Q
Sbjct: 334 ASEDIQSCQFDMFGDCMLIIQDE 356
>gi|284028027|ref|YP_003377958.1| Queuosine biosynthesis protein [Kribbella flavida DSM 17836]
gi|283807320|gb|ADB29159.1| Queuosine biosynthesis protein [Kribbella flavida DSM 17836]
Length = 344
Score = 248 bits (634), Expect = 9e-64, Method: Composition-based stats.
Identities = 86/360 (23%), Positives = 153/360 (42%), Gaps = 34/360 (9%)
Query: 8 FDLPPSRIALRPVFPRDSAR----LMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNN 63
F LP A+ P R +R L+V + ++ L L + D ++ N
Sbjct: 9 FTLPDELNAVEPPEARGLSRDQVKLLVAEGST-----VTHTRFDRLGEHLRAGDLLLVNT 63
Query: 64 TKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVI----KKGDILHFFS 119
+ + A + G + + +W V R + + GD +
Sbjct: 64 SGTLAAAVEGSWISSSGVTP--VVVHFSTELDDGTWVVELRSNGLPMLAGSTGDQVEL-- 119
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+G +L A L E+ + G Y+ ++ P+
Sbjct: 120 PEGVLKLLAPYQAGST---RLWRAQPPVAEVVDYLRRHGRPITYQYVDQQWPL-----AL 171
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
YQT +A GS P+AG F+ L+S+L + G+ + + LH G + + H
Sbjct: 172 YQTVFANQPGSAEMPSAGRPFSFELVSQLAAAGVLIAPILLHCGVSS--------LESHE 223
Query: 240 MH-SEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
+E + TA+ +N VKS GGR+++VGTT++R +ETA G + SG+T++ ++
Sbjct: 224 PPLAERYAVPEHTARLVNWVKSTGGRVIAVGTTAVRAIETAALPSGSVVASSGWTDLVLS 283
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
P VD L++ H P+++ L+L+ + G E + Y A+ Y ++ +GDT LL +
Sbjct: 284 PERPTAVVDGLITGMHAPEASHLLLLESVVGGEAVQHAYDAALDRGYLWHEFGDTCLLLR 343
>gi|168819315|ref|ZP_02831315.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Weltevreden
str. HI_N05-537]
gi|205343622|gb|EDZ30386.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Weltevreden
str. HI_N05-537]
Length = 359
Score = 248 bits (634), Expect = 9e-64, Method: Composition-based stats.
Identities = 91/370 (24%), Positives = 167/370 (45%), Gaps = 24/370 (6%)
Query: 1 MMVKEFDFDLPPSR-IALRPVFP-----RDSARLMVVHPNLSCPLVISDHLVSDLPAFLN 54
M+ +++DF + I LRP + R+ +++V++ + I S L ++
Sbjct: 1 MLTEKYDFRITDQMTIPLRPHWIANDSYREKCKMLVLNRSKG---EIHKVDFSKLTDYIK 57
Query: 55 SNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
D I FN++ +I F R+ + I L + N + + + D+
Sbjct: 58 EGDVICFNDSTII-----NHMFICKTRQNRLIKIVLEGFLPNNRVIISGLLKERLNANDV 112
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
+ + V K++ + L ++ G L Y+
Sbjct: 113 FYLVD---NPEISIKVEQKFSEESQYRAVVENHEALICYLASHGER-LDEYVDSSLFYKY 168
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF---MPVK 231
D Y++ ++K GS+ P+AG+HFT +L+ R+ G + F+TLHV + ++
Sbjct: 169 PDA--YRSVFSKKYGSLEIPSAGIHFTWDLIQRIKDKGGLISFITLHVASTEMLSNRKIQ 226
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWS 290
+ ++ ++ E + TA +N+ K GGRI +VGTT R LE+A + E + S
Sbjct: 227 TKCVEEVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLESAYSREHNCLKASS 286
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G+T ++I PGY+ + VD L++N H PK+T ++L F G++ K Y + +F +
Sbjct: 287 GWTALYIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLMKAYASEDIQSCQFDMF 346
Query: 351 GDTSLLFQKR 360
GD L+ Q
Sbjct: 347 GDCMLIIQDE 356
>gi|16760321|ref|NP_455938.1| isomerase [Salmonella enterica subsp. enterica serovar Typhi str.
CT18]
gi|29141915|ref|NP_805257.1| isomerase [Salmonella enterica subsp. enterica serovar Typhi str.
Ty2]
gi|213160920|ref|ZP_03346630.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Typhi str. E00-7866]
gi|213426452|ref|ZP_03359202.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Typhi str. E02-1180]
gi|213613345|ref|ZP_03371171.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Typhi str. E98-2068]
gi|213648021|ref|ZP_03378074.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Typhi str. J185]
gi|289826334|ref|ZP_06545446.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Typhi str. E98-3139]
gi|25318249|pir||AG0674 probable isomerase STY1513 [imported] - Salmonella enterica subsp.
enterica serovar Typhi (strain CT18)
gi|16502616|emb|CAD01768.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Typhi]
gi|29137544|gb|AAO69106.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
Length = 359
Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats.
Identities = 89/382 (23%), Positives = 167/382 (43%), Gaps = 48/382 (12%)
Query: 1 MMVKEFDFDLPPSR-IALRPVFP-----RDSARLMVVHPNLSCPLVISDHLVSDLPAFLN 54
M+ +++DF + I LRP + R+ +++V++ + I S + ++
Sbjct: 1 MLTEKYDFRITDQMTIPLRPHWIANDSYREKCKMLVLNRSKG---EIHKVDFSKVTDYIK 57
Query: 55 SNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
D I FN++ +I F RR + I L + N + + + D+
Sbjct: 58 EGDVICFNDSTII-----NHMFICKTRRNRLIKIVLEGFLLNNRVIISGLLKERLNANDV 112
Query: 115 LHFFSQD----------GQSRLEATVIDKWNTGEILLVFSISGIELERQIS--LVGTIPL 162
+ G+ V++ ++ + G L+ + L P
Sbjct: 113 FYLVDNPEISIKIEQRFGEESQYRAVVENHEA--LICYLASHGERLDEYVDSSLFYKYP- 169
Query: 163 PPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHV 222
Y++ ++K GS+ P+AG+HFT +L+ ++ G + F+TLHV
Sbjct: 170 ---------------DAYRSVFSKKYGSLEIPSAGIHFTWDLIQKIKDKGGLISFITLHV 214
Query: 223 GAGTF---MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA 279
+ ++ + ++ ++ E + TA +N+ K GGRI +VGTT R LE+A
Sbjct: 215 ASTEMLSNRKIQTKCVEEVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLESA 274
Query: 280 -TTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQ 338
+ E + SG+T ++I PGY+ + VD L++N H PK+T ++L F G++ K Y
Sbjct: 275 YSREHNCLKASSGWTALYIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLMKAYA 334
Query: 339 HAISHAYRFYSYGDTSLLFQKR 360
+ +F +GD L+ Q
Sbjct: 335 SEDIQSCQFDMFGDCMLIIQDE 356
>gi|168241078|ref|ZP_02666010.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Heidelberg
str. SL486]
gi|194450885|ref|YP_002045586.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Heidelberg
str. SL476]
gi|207856952|ref|YP_002243603.1| isomerase [Salmonella enterica subsp. enterica serovar Enteritidis
str. P125109]
gi|194409189|gb|ACF69408.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Heidelberg
str. SL476]
gi|205339445|gb|EDZ26209.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Heidelberg
str. SL486]
gi|206708755|emb|CAR33083.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
Length = 357
Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats.
Identities = 91/383 (23%), Positives = 168/383 (43%), Gaps = 50/383 (13%)
Query: 1 MMVKEFDFDLPPSR-IALRPVFP-----RDSARLMVVHPNLSCPLVISDHLVSDLPAFLN 54
M+ +++DF + I LRP + R+ +++V++ + I S L ++
Sbjct: 1 MLTEKYDFRITDQMTIPLRPHWIANDSYREKCKMLVLNRSKG---EIHKVDFSKLTDYIK 57
Query: 55 SNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
D I FN++ +I F R+ + I L + N + + + D+
Sbjct: 58 EGDVICFNDSTII-----NHMFICKTRQNRLIKIVLEGFLPNNRVIISGLLKERLNANDV 112
Query: 115 LHFFSQDG-----------QSRLEATVIDKWNTGEILLVFSISGIELERQIS--LVGTIP 161
+ +S+ A V N ++ + G L+ + L P
Sbjct: 113 FYLVDNPEISIKIEQRFSEESQYRAVVE---NHEALICYLASHGERLDEYVDSSLFYKYP 169
Query: 162 LPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLH 221
Y++ ++K GS+ P+AG+HFT +L+ ++ G + F+TLH
Sbjct: 170 ----------------DAYRSVFSKKYGSLEIPSAGIHFTWDLIQKIKDKGGLISFITLH 213
Query: 222 VGAGTF---MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET 278
V + ++ + ++ ++ E + TA +N+ K GGRI +VGTT R LE+
Sbjct: 214 VASTEMLSNRKIQTKCVEEVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLES 273
Query: 279 A-TTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMY 337
A + E + SG+T ++I PGY+ + VD L++N H PK+T ++L F G++ K Y
Sbjct: 274 AYSREHNCLKASSGWTALYIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLMKAY 333
Query: 338 QHAISHAYRFYSYGDTSLLFQKR 360
+ +F +GD L+ Q
Sbjct: 334 ASEDIQSCQFDMFGDCMLIIQDE 356
>gi|168235640|ref|ZP_02660698.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|194737330|ref|YP_002114566.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|194712832|gb|ACF92053.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197291067|gb|EDY30420.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
Length = 359
Score = 247 bits (632), Expect = 1e-63, Method: Composition-based stats.
Identities = 92/383 (24%), Positives = 169/383 (44%), Gaps = 50/383 (13%)
Query: 1 MMVKEFDFDLPPSR-IALRPVFP-----RDSARLMVVHPNLSCPLVISDHLVSDLPAFLN 54
M+ ++++F + I LRP + R+ +++V++ + I S + ++
Sbjct: 1 MLTEKYNFRITDQMTIPLRPHWIANDSYREKCKMLVLNRSKG---EIHKVDFSKVTDYIK 57
Query: 55 SNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
D I FN++ +I F RR + I L + N + + + D+
Sbjct: 58 EGDVICFNDSTII-----NHMFICKTRRNRLIKIVLEGFLPNNRVIISGLLKERLNANDV 112
Query: 115 LHFFSQDG-----------QSRLEATVIDKWNTGEILLVFSISGIELERQIS--LVGTIP 161
+ G +S+ A V N ++ + G L+ + L P
Sbjct: 113 FYLVDNPGISIKIEQKFSEESQYRAVVE---NHEALICYLASHGERLDEYVDSSLFYKYP 169
Query: 162 LPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLH 221
Y++ ++K GS+ P+AG+HFT +L+ R+ G + F+TLH
Sbjct: 170 ----------------DAYRSVFSKKYGSLEIPSAGIHFTWDLIQRIKDKGGLISFITLH 213
Query: 222 VGAGTF---MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET 278
V + ++ + ++ ++ E + TA +N+ K GGRI +VGTT R LE+
Sbjct: 214 VASTEMLSNRKIQTKCVEEVTINEEYYEVSQATADIINTAKQNGGRIFAVGTTVTRCLES 273
Query: 279 A-TTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMY 337
A + E + SG+T ++I PGY+ + VD L++N H PK+T ++L F G++ K Y
Sbjct: 274 AYSREHNCLKASSGWTALYIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLMKAY 333
Query: 338 QHAISHAYRFYSYGDTSLLFQKR 360
+ +F +GD L+ Q
Sbjct: 334 ASEDIQSCQFDMFGDCMLIIQDE 356
>gi|197248887|ref|YP_002146493.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|197212590|gb|ACH49987.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
Length = 359
Score = 247 bits (632), Expect = 2e-63, Method: Composition-based stats.
Identities = 91/370 (24%), Positives = 166/370 (44%), Gaps = 24/370 (6%)
Query: 1 MMVKEFDFDLPPSR-IALRPVFP-----RDSARLMVVHPNLSCPLVISDHLVSDLPAFLN 54
M+ +++DF + I LRP + R+ +++V++ + I S + ++
Sbjct: 1 MLTEKYDFRITDQMTIPLRPHWIANDSYREKCKMLVLNRSKG---EIHKVDFSKVTDYIK 57
Query: 55 SNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
D I FN++ +I F RR + I L + N + + + D+
Sbjct: 58 EGDVICFNDSTII-----NHMFICKTRRNRLIKVVLEGFLPNNRVIISGLLKERLNANDV 112
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
+ V K++ + L ++ G L Y+
Sbjct: 113 FSLVD---NPEISIKVEQKFSEESQYRAVVENHEALICYLASHGER-LDEYVDSSLFYKY 168
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF---MPVK 231
D Y++ ++K GS+ P+AG+HFT +L+ R+ G + F+TLHV + ++
Sbjct: 169 PDA--YRSVFSKKYGSLEIPSAGIHFTWDLIQRIKDKGGLISFITLHVASTEMLSNRKIQ 226
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWS 290
+ ++ ++ E + TA +N+ K GGRI +VGTT R LE+A + E + S
Sbjct: 227 TKCVEEVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLESAYSREHNCLKASS 286
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G+T ++I PGY+ + VD L++N H PK+T ++L F G++ K Y + +F +
Sbjct: 287 GWTALYIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLMKAYASEDIQSCQFDMF 346
Query: 351 GDTSLLFQKR 360
GD L+ Q
Sbjct: 347 GDCMLIIQDE 356
>gi|168260278|ref|ZP_02682251.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Hadar str.
RI_05P066]
gi|197262986|ref|ZP_03163060.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|197241241|gb|EDY23861.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|205351111|gb|EDZ37742.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Hadar str.
RI_05P066]
Length = 359
Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats.
Identities = 92/383 (24%), Positives = 168/383 (43%), Gaps = 50/383 (13%)
Query: 1 MMVKEFDFDLPPSR-IALRPVFP-----RDSARLMVVHPNLSCPLVISDHLVSDLPAFLN 54
M+ +++DF + I LRP + R+ +++V++ + I S L ++
Sbjct: 1 MLTEKYDFRITDQMTIPLRPHWIANDSYREKCKMLVLNRSKG---EIHKVDFSKLTDYIK 57
Query: 55 SNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
D I FN++ +I F R+ + I L + N + + + D+
Sbjct: 58 EGDVICFNDSTII-----NHMFICKTRQNRLIKIVLEGFLPNNRVIISGLLKERLNANDV 112
Query: 115 LHFFSQDG-----------QSRLEATVIDKWNTGEILLVFSISGIELERQIS--LVGTIP 161
+ +S+ A V N ++ + G L+ + L P
Sbjct: 113 FYLVDNPEISIKIEQRFSEESQYRAVVE---NHEALIFYLASHGERLDEYVDSSLFYKYP 169
Query: 162 LPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLH 221
Y++ ++K GS+ P+AG+HFT +L+ R+ G + F+TLH
Sbjct: 170 ----------------DAYRSVFSKKYGSLEIPSAGIHFTWDLIQRIKDKGGLISFITLH 213
Query: 222 VGAGTF---MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET 278
V + ++ + ++ ++ E + TA +N+ K GGRI +VGTT R LE+
Sbjct: 214 VASTEMLSNRKIQTKCVEEVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLES 273
Query: 279 A-TTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMY 337
A + E + SG+T ++I PGY+ + VD L++N H PK+T ++L F G++ K Y
Sbjct: 274 AYSREHNCLKASSGWTALYIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLIKAY 333
Query: 338 QHAISHAYRFYSYGDTSLLFQKR 360
+ +F +GD L+ Q
Sbjct: 334 TSEHIQSCQFDMFGDCMLIIQDE 356
>gi|326440409|ref|ZP_08215143.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces clavuligerus ATCC 27064]
Length = 364
Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats.
Identities = 92/362 (25%), Positives = 154/362 (42%), Gaps = 39/362 (10%)
Query: 11 PPSRIALRPVFPR----DSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKV 66
P A P R D RL+V +S + +LP L + D +V N ++
Sbjct: 14 PDELSAGVPAEVRGAGRDDVRLLVSRGER-----VSHRVFGELPGLLRAGDVLVVNTSRT 68
Query: 67 ITAQLNGVR-----FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
+ A +NG H + R + + +R S R G ++
Sbjct: 69 LPAAVNGRVQGEPVVVHFSTRGDDGRWAVELRTPDGRGSSLPRAGGP--VGAVVRL---P 123
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G RL +G L ++ + + G Y A +P+ A YQ
Sbjct: 124 GGERLVQEAPLSPGSGR--LWWAWVSTPVPELLGRCGRPIRYGYTAGDQPLSA-----YQ 176
Query: 182 TTYAKIQ----GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
T +A+ GS P+A FT ++ L+ G++ V LH G V +
Sbjct: 177 TVFARRSPDGSGSAEMPSAARPFTERTVAALVRRGVQFAPVVLHTG--------VASAEA 228
Query: 238 H-IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H + E + A +A +N+ ++ GGRI++VGTT++R LE+AT DG++ SG+T++
Sbjct: 229 HEPPYPERFAVPAASAWLVNAARAGGGRILAVGTTAVRALESATGADGVVREASGWTDLV 288
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P RAVD L++ H P ++ L+++ A G + Y A+ Y ++ +GD L+
Sbjct: 289 IGPKRGVRAVDGLLTGLHEPAASHLLMLEAIAGRPALSRAYDEALRGLYLWHEFGDVHLV 348
Query: 357 FQ 358
Sbjct: 349 LP 350
>gi|302524810|ref|ZP_07277152.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces sp. AA4]
gi|302433705|gb|EFL05521.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces sp. AA4]
Length = 341
Score = 246 bits (629), Expect = 3e-63, Method: Composition-based stats.
Identities = 95/367 (25%), Positives = 164/367 (44%), Gaps = 34/367 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPR----DSARLMVVHPNLSCPLVISDHLVSDLPAFLNSN 56
M FDL R A P R D RL+ + P + + DL AFL
Sbjct: 1 MTAPRTRFDLAEDRSASAPPEARGLARDEVRLL-----AAGPNGVQHAVFRDLAAFLQPG 55
Query: 57 DAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYAR-PSKVI---KKG 112
D +V N + + A ++ VR H+ ++ + +W V R P + + G
Sbjct: 56 DLLVVNTSGTLPAAVDAVRDDHV------VTVHFSTELDDGTWVVELRTPGGPLLDGRAG 109
Query: 113 DILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPI 172
+ L+ + G + G L + ++ VG Y+ R P+
Sbjct: 110 ERLNLPA--GAVVTLCEPHVAGAQRLWRAKIEVEGK-LPQYLAKVGRPIRYGYVPRAWPL 166
Query: 173 DARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
+YQT +A GS P+A FT+ L+++L+S G+ + LH G + +
Sbjct: 167 -----PNYQTVFALDPGSAEMPSAARPFTAELVTQLVSRGVLFAPILLHTGVSSPEAGE- 220
Query: 233 EDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGF 292
+ E + A TA +N V+ +GGR+++VGTT++R +E+A G++ +G+
Sbjct: 221 ------PPYGERFRVPATTAALVNWVRDQGGRVIAVGTTAVRAIESAANPGGLVTAAAGW 274
Query: 293 TNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
T + + P RAVD L++ H P+++ L+L+ A G E ++ Y A+ Y ++ +GD
Sbjct: 275 TELVLGPDRPARAVDGLITGLHAPEASHLLLLEAVVGAELVQRAYDAAVRREYLWHEFGD 334
Query: 353 TSLLFQK 359
SLL +
Sbjct: 335 VSLLTSR 341
>gi|254392740|ref|ZP_05007913.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces clavuligerus ATCC 27064]
gi|294811852|ref|ZP_06770495.1| tRNA ribosyltransferase-isomerase [Streptomyces clavuligerus ATCC
27064]
gi|197706400|gb|EDY52212.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces clavuligerus ATCC 27064]
gi|294324451|gb|EFG06094.1| tRNA ribosyltransferase-isomerase [Streptomyces clavuligerus ATCC
27064]
Length = 369
Score = 246 bits (629), Expect = 3e-63, Method: Composition-based stats.
Identities = 92/362 (25%), Positives = 154/362 (42%), Gaps = 39/362 (10%)
Query: 11 PPSRIALRPVFPR----DSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKV 66
P A P R D RL+V +S + +LP L + D +V N ++
Sbjct: 19 PDELSAGVPAEVRGAGRDDVRLLVSRGER-----VSHRVFGELPGLLRAGDVLVVNTSRT 73
Query: 67 ITAQLNGVR-----FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
+ A +NG H + R + + +R S R G ++
Sbjct: 74 LPAAVNGRVQGEPVVVHFSTRGDDGRWAVELRTPDGRGSSLPRAGGP--VGAVVRL---P 128
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
G RL +G L ++ + + G Y A +P+ A YQ
Sbjct: 129 GGERLVQEAPLSPGSGR--LWWAWVSTPVPELLGRCGRPIRYGYTAGDQPLSA-----YQ 181
Query: 182 TTYAKIQ----GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDD 237
T +A+ GS P+A FT ++ L+ G++ V LH G V +
Sbjct: 182 TVFARRSPDGSGSAEMPSAARPFTERTVAALVRRGVQFAPVVLHTG--------VASAEA 233
Query: 238 H-IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIF 296
H + E + A +A +N+ ++ GGRI++VGTT++R LE+AT DG++ SG+T++
Sbjct: 234 HEPPYPERFAVPAASAWLVNAARAGGGRILAVGTTAVRALESATGADGVVREASGWTDLV 293
Query: 297 ITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
I P RAVD L++ H P ++ L+++ A G + Y A+ Y ++ +GD L+
Sbjct: 294 IGPKRGVRAVDGLLTGLHEPAASHLLMLEAIAGRPALSRAYDEALRGLYLWHEFGDVHLV 353
Query: 357 FQ 358
Sbjct: 354 LP 355
>gi|168229939|ref|ZP_02654997.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|194470161|ref|ZP_03076145.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|194456525|gb|EDX45364.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|205335353|gb|EDZ22117.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
Length = 357
Score = 246 bits (629), Expect = 4e-63, Method: Composition-based stats.
Identities = 91/381 (23%), Positives = 167/381 (43%), Gaps = 50/381 (13%)
Query: 1 MMVKEFDFDLPPSR-IALRPVFP-----RDSARLMVVHPNLSCPLVISDHLVSDLPAFLN 54
M+ +++DF + I LRP + R+ +++V++ + I S + ++
Sbjct: 1 MLTEKYDFRITDQMTIPLRPHWIANDLYREKCKMLVLNRSKG---EIHKVDFSKVTDYIK 57
Query: 55 SNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
D I FN++ +I F R+ + I L + N + + + D+
Sbjct: 58 EGDVICFNDSTII-----NHMFICKTRQNRLIKIVLEGFLPNNRVIISGLLKERLNANDV 112
Query: 115 LHFFSQDG-----------QSRLEATVIDKWNTGEILLVFSISGIELERQIS--LVGTIP 161
+S+ A V N ++ + G L+ + L P
Sbjct: 113 FSLIDNPEISIKIEQRFSEESQYRAVVE---NHEALICYLASHGERLDEYVDSSLFYKYP 169
Query: 162 LPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLH 221
Y++ ++K GS+ P+AG+HFT +L+ R+ G + F+TLH
Sbjct: 170 ----------------DAYRSVFSKKYGSLEIPSAGIHFTWDLIQRIKDKGGLISFITLH 213
Query: 222 VGAGTF---MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET 278
V + ++ + ++ ++ E + TA +N+ K GGRI +VGTT R LE+
Sbjct: 214 VASTEMLSNRKIQTKCVEEVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLES 273
Query: 279 A-TTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMY 337
A + E + SG+T ++I PGY+ + VD L++N H PK+T ++L F G++ K Y
Sbjct: 274 AYSREHNCLKASSGWTALYIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLMKAY 333
Query: 338 QHAISHAYRFYSYGDTSLLFQ 358
+ +F +GD L+ Q
Sbjct: 334 ASEDIQSCQFDMFGDCMLIIQ 354
>gi|219685368|ref|ZP_03540187.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
garinii Far04]
gi|219673141|gb|EED30161.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
garinii Far04]
Length = 258
Score = 246 bits (629), Expect = 4e-63, Method: Composition-based stats.
Identities = 96/274 (35%), Positives = 141/274 (51%), Gaps = 17/274 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF F+LP S IA P R S+RLMV+ P L + ++ V+++ ++NS+ I+
Sbjct: 1 MKTKEFHFNLPCSLIAQYPSEKRGSSRLMVLDPKLQK--IYHENSVNNILKYINSDTFII 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV +++ N I + R+ + ++ SK G++ F
Sbjct: 59 FNNSKVRKSRMYAESEMGNN-----IEFLILDRIGTDLFTALISKSKKQIVGNVYKFPEG 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L N EI+L F + E G +P+PPYI KR D D Y
Sbjct: 114 LMGEILS------KNNSEIVLKFDNNVD--EDYFEKHGFVPIPPYI--KRDYDKIDEDRY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS A+ TAGLHF+ +L S I+ F+TLHVG GTF+PV+ + ++H M
Sbjct: 164 QTVYSKYVGSAASATAGLHFSRDLFSAFEKNNIEYDFITLHVGLGTFLPVRSKKVEEHNM 223
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLR 274
H E I+ A L + K G +I+S+GTT+LR
Sbjct: 224 HFETFLIENSVAARLENAKFLGKKILSIGTTTLR 257
>gi|213864765|ref|ZP_03386884.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Typhi str. M223]
Length = 358
Score = 246 bits (629), Expect = 4e-63, Method: Composition-based stats.
Identities = 87/370 (23%), Positives = 166/370 (44%), Gaps = 25/370 (6%)
Query: 1 MMVKEFDFDLPPSR-IALRPVFP-----RDSARLMVVHPNLSCPLVISDHLVSDLPAFLN 54
M+ +++DF + I LRP + R+ +++V++ + I S + ++
Sbjct: 1 MLTEKYDFRITDQMTIPLRPHWIANDSYREKCKMLVLNRSKG---EIHKVDFSKVTDYIK 57
Query: 55 SNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
D I FN++ +I F RR + I L + N + + + D+
Sbjct: 58 EGDVICFNDSTII-----NHMFICKTRRNRLIKIVLEGFLLNNRVIISGLLKERLNANDV 112
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
+ + + ++ + L ++ G L Y+ +
Sbjct: 113 FYLVD---NPEISIKIEQRFGEESQYRAVVENHEALICYLASHGER-LDEYVDSSLFYNP 168
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF---MPVK 231
Y++ ++K GS+ P+AG+HFT +L+ ++ G + F+TLHV + ++
Sbjct: 169 ---DAYRSVFSKKYGSLEIPSAGIHFTWDLIQKIKDKGGLISFITLHVASTEMLSNRKIQ 225
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWS 290
+ ++ ++ E + TA +N+ K GGRI +VGTT R LE+A + E + S
Sbjct: 226 TKCVEEVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLESAYSREHNCLKASS 285
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G+T ++I PGY+ + VD L++N H PK+T ++L F G++ K Y + +F +
Sbjct: 286 GWTALYIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLMKAYASEDIQSCQFDMF 345
Query: 351 GDTSLLFQKR 360
GD L+ Q
Sbjct: 346 GDCMLIIQDE 355
>gi|159899299|ref|YP_001545546.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Herpetosiphon aurantiacus ATCC 23779]
gi|159892338|gb|ABX05418.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Herpetosiphon aurantiacus ATCC 23779]
Length = 349
Score = 246 bits (628), Expect = 5e-63, Method: Composition-based stats.
Identities = 95/371 (25%), Positives = 158/371 (42%), Gaps = 46/371 (12%)
Query: 7 DFDLPPSRIALRPVF----PRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
DF+LP A P RD RLMV H I + L L + D + N
Sbjct: 6 DFELPAVLEAGEPPEARGLERDQVRLMVSHSRS---NTIEHYRFDQLSMILQAGDVLAIN 62
Query: 63 NTKVITAQL-----NGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
+ + A + +G RF + L P+ S ++P + G+ L+
Sbjct: 63 TSGTLNAAIPATDASGQRFMVHLSTQLLAELWLVEVRLPHGTS--SQPYRAALAGNSLNL 120
Query: 118 FSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIP--LPPY-------IAR 168
S ++ G + R +P LP Y I
Sbjct: 121 PSGGQIDIHRG--------------YANDGSAINRLWIASLRLPQPLPHYLAEHAKPIHY 166
Query: 169 KRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFM 228
+ YQT YA GS P+AG F+ LL+RL++ GI++ + LH G
Sbjct: 167 QYVAADWPNSYYQTVYATELGSAEMPSAGRAFSERLLTRLVAQGIQIAPLLLHTG----- 221
Query: 229 PVKVEDTDDHIMHS-EIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIIN 287
V +DH E + A +A +N ++ R+++VGTTS+R +E+ + G+++
Sbjct: 222 ---VASLEDHEPPYAEWYRVPATSADLINRARADHRRVIAVGTTSVRAIESTVDQRGLVH 278
Query: 288 PWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
P +G+T + ITP + +AVD +++ H PK+T L +++A G + + YQ A+ Y +
Sbjct: 279 PQAGWTELVITPEHGLQAVDGILTGLHEPKATHLAMLAALAGYQHLELCYQAALEQHYLW 338
Query: 348 YSYGDTSLLFQ 358
+ +GD L+
Sbjct: 339 HEFGDLHLILP 349
>gi|295093023|emb|CBK82114.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [Coprococcus sp. ART55/1]
Length = 209
Score = 245 bits (627), Expect = 7e-63, Method: Composition-based stats.
Identities = 68/220 (30%), Positives = 95/220 (43%), Gaps = 21/220 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F +DLP IA P+ R +RLMV+ I D+ +LN D +V
Sbjct: 1 MKLTDFYYDLPQELIAQDPLLKRSESRLMVLDRKD---NTIEHKHFYDVIDYLNPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L GV+ I L R +W +P K K G + F S+
Sbjct: 58 INDTRVLPARLMGVK----EDTGASIEVLLLKRKDDCTWETLVKPGKKCKVGARIVFGSE 113
Query: 121 DGQ---------SRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRP 171
+ +L V+D G L+ F GI E + +G +PLPPYI K
Sbjct: 114 SNEPDPETGLIKGKLVGEVVDIVEEGNRLIRFEFDGI-FEEILDELGQMPLPPYITHK-- 170
Query: 172 IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISI 211
D YQT YA+ GS AAPT + LSR
Sbjct: 171 --LEDKNRYQTVYAEHDGSAAAPTPDCILQQSFLSRSRQR 208
>gi|322616167|gb|EFY13083.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 315996572]
gi|322620892|gb|EFY17751.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 495297-1]
gi|322623017|gb|EFY19859.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 495297-3]
gi|322628307|gb|EFY25095.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 495297-4]
gi|322634712|gb|EFY31443.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 515920-1]
gi|322638721|gb|EFY35416.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 515920-2]
gi|322641114|gb|EFY37758.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 531954]
gi|322646522|gb|EFY43030.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. NC_MB110209-0054]
gi|322649113|gb|EFY45554.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. OH_2009072675]
gi|322654510|gb|EFY50832.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. CASC_09SCPH15965]
gi|322660771|gb|EFY57004.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 19N]
gi|322665127|gb|EFY61315.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 81038-01]
gi|322667871|gb|EFY64031.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. MD_MDA09249507]
gi|322671717|gb|EFY67838.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 414877]
gi|322677237|gb|EFY73301.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 366867]
gi|322680100|gb|EFY76139.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 413180]
gi|322685471|gb|EFY81467.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 446600]
gi|323193680|gb|EFZ78884.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 609458-1]
gi|323199987|gb|EFZ85075.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 556150-1]
gi|323204718|gb|EFZ89715.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 609460]
gi|323205716|gb|EFZ90679.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 507440-20]
gi|323214108|gb|EFZ98869.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 556152]
gi|323216779|gb|EGA01503.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. MB101509-0077]
gi|323223044|gb|EGA07388.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. MB102109-0047]
gi|323225192|gb|EGA09438.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. MB110209-0055]
gi|323231905|gb|EGA16012.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. MB111609-0052]
gi|323234432|gb|EGA18519.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 2009083312]
gi|323237883|gb|EGA21942.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 2009085258]
gi|323243516|gb|EGA27535.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. 315731156]
gi|323249513|gb|EGA33427.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2009159199]
gi|323254242|gb|EGA38060.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008282]
gi|323255068|gb|EGA38854.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008283]
gi|323261270|gb|EGA44858.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008284]
gi|323266635|gb|EGA50122.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Montevideo
str. IA_2010008285]
Length = 359
Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats.
Identities = 90/370 (24%), Positives = 166/370 (44%), Gaps = 24/370 (6%)
Query: 1 MMVKEFDFDLPPSR-IALRPVFP-----RDSARLMVVHPNLSCPLVISDHLVSDLPAFLN 54
M+ +++DF + I LRP + R+ +++V++ + I S + ++
Sbjct: 1 MLTEKYDFRITDQMTIPLRPHWIANDSYREKCKMLVLNRSKG---EIHKVDFSKVTDYIK 57
Query: 55 SNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
D I FN++ +I F R + I L + N + + + D+
Sbjct: 58 EGDVICFNDSTII-----NHMFICKTRWNRLIKIVLEGFLPNNRVIISGLLKERLNAYDV 112
Query: 115 LHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
+ + V K++ + L ++ G L Y+
Sbjct: 113 FYLVD---NPEISIKVEQKFSEESQYRAVVENHEALICYLASHGER-LDEYVDSSLFYKY 168
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF---MPVK 231
D Y++ ++K GS+ P+AG+HFT +L+ R+ G + F+TLHV + ++
Sbjct: 169 PDA--YRSVFSKKYGSLEIPSAGIHFTWDLIQRIKDKGGLISFITLHVASTEMLSNRKIQ 226
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWS 290
+ ++ ++ E + TA +N+ K GGRI +VGTT R LE+A + E + S
Sbjct: 227 TKCVEEVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLESAYSREHNCLKASS 286
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G+T ++I PGY+ + VD L++N H PK+T ++L F G++ K Y + +F +
Sbjct: 287 GWTALYIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLMKAYASEHIQSCKFDMF 346
Query: 351 GDTSLLFQKR 360
GD L+ Q
Sbjct: 347 GDCMLIIQDE 356
>gi|297624743|ref|YP_003706177.1| Queuosine biosynthesis protein [Truepera radiovictrix DSM 17093]
gi|297165923|gb|ADI15634.1| Queuosine biosynthesis protein [Truepera radiovictrix DSM 17093]
Length = 364
Score = 244 bits (624), Expect = 1e-62, Method: Composition-based stats.
Identities = 94/364 (25%), Positives = 156/364 (42%), Gaps = 22/364 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVF----PRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSN 56
+ + + F+ P A P PRD+ RL+V S P ++L FL
Sbjct: 3 LTLSDLTFERPEHLQATEPPEQRGVPRDAVRLLV-----STPEGHHGSCFANLANFLEPG 57
Query: 57 DAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI-L 115
D +V N + + A L ++ + +W R S + G + L
Sbjct: 58 DLLVVNRSATLPASLPA--EGGFGSFVLNLATRYGRGPNAETWLAEPRWS-FAEPGPLPL 114
Query: 116 HFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDAR 175
L AT++ + L G ++ + +G Y+AR P+
Sbjct: 115 ALGDVVTAGGLRATLVHPYPGLPRLWFVRFDG-DVGAAMQRLGAPIRYGYVARAYPL--- 170
Query: 176 DYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
YQT +A GS P+A F+ +L L + G+ V +TLH G + + V
Sbjct: 171 --ATYQTLFADAPGSAEMPSAARPFSKRVLRCLAARGVGVARITLHTGVSS-LEVTEYKA 227
Query: 236 DDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNI 295
H + E + TA A+ K+ GGR+++VGTT +R LE+A DG + P GFT +
Sbjct: 228 ARHPLPPEPFEVPPETADAVRETKAAGGRVIAVGTTVVRALESAW--DGTMKPARGFTRL 285
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
++ PG VD L++ FH PK++ L ++ A G + Y A+ Y ++ +GD+ L
Sbjct: 286 YLHPGRAVNVVDGLLTGFHDPKASHLAMLYAVAGQALVRGAYAEAVREGYLWHEFGDSHL 345
Query: 356 LFQK 359
+ +
Sbjct: 346 ILPR 349
>gi|39546320|ref|NP_460508.2| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|167992895|ref|ZP_02573990.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205328936|gb|EDZ15700.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|267993455|gb|ACY88340.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Typhimurium
str. 14028S]
gi|301158076|emb|CBW17572.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|312912533|dbj|BAJ36507.1| putative S-adenosylmethionine:tRNA- ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Typhimurium
str. T000240]
gi|321224168|gb|EFX49231.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhimurium str.
TN061786]
gi|323129817|gb|ADX17247.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Typhimurium
str. 4/74]
Length = 359
Score = 244 bits (624), Expect = 1e-62, Method: Composition-based stats.
Identities = 92/383 (24%), Positives = 168/383 (43%), Gaps = 50/383 (13%)
Query: 1 MMVKEFDFDLPPSR-IALRPVFP-----RDSARLMVVHPNLSCPLVISDHLVSDLPAFLN 54
M+ +++DF + I LRP + R+ +++V++ + I S L ++
Sbjct: 1 MLTEKYDFRITDQMTIPLRPHWIANDSYREKCKMLVLNRSKG---EIHKVDFSKLTDYIK 57
Query: 55 SNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
D I FN++ +I F R+ + I L + N + + + D+
Sbjct: 58 EGDVICFNDSTII-----NHMFICKTRQNRLIKIVLEGFLPNNRVIISGLLKERLNANDV 112
Query: 115 LHFFSQDG-----------QSRLEATVIDKWNTGEILLVFSISGIELERQIS--LVGTIP 161
+ +S+ A V N ++ + G L+ + L P
Sbjct: 113 FYLVDNPEISIKIEQRFSEESQYRAVVE---NHEALICYLASHGERLDEYVDSSLFYKYP 169
Query: 162 LPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLH 221
Y++ ++K GS+ P+AG+HFT +L+ R+ G + F+TLH
Sbjct: 170 ----------------DAYRSVFSKKYGSLEIPSAGIHFTWDLIQRIKDKGGLISFITLH 213
Query: 222 VGAGTF---MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET 278
V + ++ + ++ ++ E + TA +N+ K GGRI +VGTT R LE+
Sbjct: 214 VASTEMLSNRKIQTKCVEEVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLES 273
Query: 279 A-TTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMY 337
A + E + SG+T ++I PGY+ + VD L++N H PK+T ++L F G++ K Y
Sbjct: 274 AYSREHNCLKASSGWTALYIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLIKAY 333
Query: 338 QHAISHAYRFYSYGDTSLLFQKR 360
+ +F +GD L+ Q
Sbjct: 334 TSEHIQSCQFDMFGDCMLIIQDE 356
>gi|289772478|ref|ZP_06531856.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces lividans TK24]
gi|289702677|gb|EFD70106.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces lividans TK24]
Length = 359
Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats.
Identities = 96/372 (25%), Positives = 161/372 (43%), Gaps = 46/372 (12%)
Query: 11 PPSRIALRPVF------PRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
P A P RD RL+V S +S H ++LP L + D +V N +
Sbjct: 10 PEELSARVPAEQRGPGLDRDDVRLLV-----SRGTEVSHHGFAELPGLLRAGDLLVVNTS 64
Query: 65 KVITAQLNGVR-----FCHINRREKEISCTLHMRVSPNSWSVYARP--------SKVIKK 111
+ A ++G H + R + + +R + AR
Sbjct: 65 PTLAAAVDGRVGHARVVVHFSTRGDDDRWAVELREPDGRGATRARAEAEGVEGRGCGGLA 124
Query: 112 GDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRP 171
G + G +RL GE L +SG E+ + G Y R +P
Sbjct: 125 GTKVRL---PGGARLVLE-EPLSARGERLWWARVSGAEVPALLREHGRPIRYSYTERDQP 180
Query: 172 IDARDYVDYQTT----YAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
+ YQT YA GS P+A FT+ L++ L+S G++ VTLH G
Sbjct: 181 LSV-----YQTVFALPYADGTGSAEMPSAARPFTARLVAELVSRGVQFAPVTLHTG---- 231
Query: 228 MPVKVEDTDDH-IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII 286
V + H + E + +A+ +N+V++ GR+V+VGTT++R +E+A DG++
Sbjct: 232 ----VASAESHEPPYPERFAVPEASARLINAVRAGDGRVVAVGTTAVRAVESAAGADGVV 287
Query: 287 NPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYR 346
+G+T++ +TP R VD L++ H P+++ L+++ A G + Y+ A+ Y
Sbjct: 288 RARAGWTDLVVTPERGVRVVDGLLTGLHEPEASHLLMLEAVAGQAAIDRGYEAAVRRRYL 347
Query: 347 FYSYGDTSLLFQ 358
++ +GD LL
Sbjct: 348 WHEFGDVHLLLP 359
>gi|21220294|ref|NP_626073.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces coelicolor A3(2)]
gi|256788586|ref|ZP_05527017.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces lividans TK24]
gi|12718424|emb|CAC28544.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces coelicolor A3(2)]
Length = 358
Score = 243 bits (620), Expect = 3e-62, Method: Composition-based stats.
Identities = 96/372 (25%), Positives = 161/372 (43%), Gaps = 46/372 (12%)
Query: 11 PPSRIALRPVF------PRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
P A P RD RL+V S +S H ++LP L + D +V N +
Sbjct: 9 PEELSARVPAEQRGPGLDRDDVRLLV-----SRGTEVSHHGFAELPGLLRAGDLLVVNTS 63
Query: 65 KVITAQLNGVR-----FCHINRREKEISCTLHMRVSPNSWSVYARP--------SKVIKK 111
+ A ++G H + R + + +R + AR
Sbjct: 64 PTLAAAVDGRVGHARVVVHFSTRGDDDRWAVELREPDGRGATRARAEAEGVEGRGCGGLA 123
Query: 112 GDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRP 171
G + G +RL GE L +SG E+ + G Y R +P
Sbjct: 124 GTKVRL---PGGARLVLE-EPLSARGERLWWARVSGAEVPALLREHGRPIRYSYTERDQP 179
Query: 172 IDARDYVDYQTT----YAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF 227
+ YQT YA GS P+A FT+ L++ L+S G++ VTLH G
Sbjct: 180 LSV-----YQTVFALPYADGTGSAEMPSAARPFTARLVAELVSRGVQFAPVTLHTG---- 230
Query: 228 MPVKVEDTDDH-IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGII 286
V + H + E + +A+ +N+V++ GR+V+VGTT++R +E+A DG++
Sbjct: 231 ----VASAESHEPPYPERFAVPEASARLINAVRAGDGRVVAVGTTAVRAVESAAGADGVV 286
Query: 287 NPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYR 346
+G+T++ +TP R VD L++ H P+++ L+++ A G + Y+ A+ Y
Sbjct: 287 RARAGWTDLVVTPERGVRVVDGLLTGLHEPEASHLLMLEAVAGQAAIDRGYEAAVRRRYL 346
Query: 347 FYSYGDTSLLFQ 358
++ +GD LL
Sbjct: 347 WHEFGDVHLLLP 358
>gi|168463025|ref|ZP_02696956.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|195634554|gb|EDX52906.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Newport
str. SL317]
Length = 359
Score = 243 bits (620), Expect = 4e-62, Method: Composition-based stats.
Identities = 91/383 (23%), Positives = 167/383 (43%), Gaps = 50/383 (13%)
Query: 1 MMVKEFDFDLPPSR-IALRPVFP-----RDSARLMVVHPNLSCPLVISDHLVSDLPAFLN 54
M+ +++DF + I LRP + R+ +++V++ + I S + ++
Sbjct: 1 MLTEKYDFRITDQMTIPLRPHWIANDSYREKCKMLVLNRSKG---EIHKVDFSKVTDYIK 57
Query: 55 SNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
D I FN++ +I F R + I L + N + + + D+
Sbjct: 58 EGDVICFNDSTII-----NHMFICKTRWNRLIKIVLEGFLPNNRVIISGLLKERLNANDV 112
Query: 115 LHFFSQDG-----------QSRLEATVIDKWNTGEILLVFSISGIELERQIS--LVGTIP 161
+ +S+ A V N ++ + G L+ + L P
Sbjct: 113 FYLVDNPEISIKIEQRFSEESQYRAVVE---NHEALICYLASHGERLDEYVDSSLFYKYP 169
Query: 162 LPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLH 221
Y++ ++K GS+ P+AG+HFT +L+ R+ G + F+TLH
Sbjct: 170 ----------------DAYRSVFSKKYGSLEIPSAGIHFTWDLIQRIKDKGGLISFITLH 213
Query: 222 VGAGTF---MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET 278
V + ++ + ++ ++ E + TA +N+ K GGRI +VGTT R LE+
Sbjct: 214 VASTEMLSNRKIQTKCVEEVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLES 273
Query: 279 A-TTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMY 337
A + E + SG+T ++I PGY+ + VD L++N H PK+T ++L F G++ K Y
Sbjct: 274 AYSREHNCLKASSGWTALYIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLIKAY 333
Query: 338 QHAISHAYRFYSYGDTSLLFQKR 360
+ +F +GD L+ Q
Sbjct: 334 TSEHIQSCQFDMFGDCMLIIQDE 356
>gi|239940283|ref|ZP_04692220.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces roseosporus NRRL 15998]
gi|239986764|ref|ZP_04707428.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces roseosporus NRRL 11379]
gi|291443716|ref|ZP_06583106.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces roseosporus NRRL 15998]
gi|291346663|gb|EFE73567.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces roseosporus NRRL 15998]
Length = 391
Score = 242 bits (619), Expect = 5e-62, Method: Composition-based stats.
Identities = 88/367 (23%), Positives = 154/367 (41%), Gaps = 43/367 (11%)
Query: 11 PPSRIALRPVFPR----DSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKV 66
P A P R D RL+V ++ +LP L D +V N +
Sbjct: 39 PEELSARVPAEQRGAGRDDVRLLVSRGRS-----VAHQAFRELPEQLRGGDVLVVNTSMT 93
Query: 67 ITAQLNGVR-----FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
+ A +NG H + R + + +R + RP G ++
Sbjct: 94 LPAAVNGRVGGERVVVHFSTRGADGRWAVEVRAPAGAGVTGPRPGGP--AGAVVRLPGG- 150
Query: 122 GQSRLEATVIDK--WNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
A V++ + L ++ + + G Y R +P+ A
Sbjct: 151 -----RALVLEDPLGPSAGARLWWARVPEAVPELLRRYGRPIRYGYTDRDQPLSA----- 200
Query: 180 YQTTYA----KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
Y+T +A GS P+A FT L++ L+ G+ + LH G V
Sbjct: 201 YRTVFAVDSPDGGGSAEMPSAARPFTVPLVAELVRRGVLFAPLFLHTG--------VASA 252
Query: 236 DDH-IMHSEIGFIDAPTAQALNSVKSRG-GRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
+ H + E + A TA +N+V++ G GR+++VGTT++R LE+A DG++ P G+T
Sbjct: 253 ESHEPPYPERFAVPAATAWLVNAVRAAGSGRVIAVGTTAVRALESAAGADGVVRPAEGWT 312
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
++ +TP R VD L++ H P+++ L+++ A G E + Y+ A+ Y ++ +GD
Sbjct: 313 DLVVTPRRGVRVVDGLLTGLHEPRASHLLMLEAVAGREALRHGYEAALQERYLWHEFGDV 372
Query: 354 SLLFQKR 360
L+
Sbjct: 373 HLILPDE 379
>gi|194442935|ref|YP_002040797.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Newport
str. SL254]
gi|194401598|gb|ACF61820.1| putative S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Newport
str. SL254]
Length = 359
Score = 242 bits (619), Expect = 5e-62, Method: Composition-based stats.
Identities = 92/383 (24%), Positives = 168/383 (43%), Gaps = 50/383 (13%)
Query: 1 MMVKEFDFDLPPSR-IALRPVFP-----RDSARLMVVHPNLSCPLVISDHLVSDLPAFLN 54
M+ +++DF + I LRP + R+ +++V++ + I S L ++
Sbjct: 1 MLTEKYDFRITDQMTILLRPHWIANDSYREKCKMLVLNRSKG---EIHKVDFSKLTDYIK 57
Query: 55 SNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
D I FN++ +I F R+ + I L + N + + + D+
Sbjct: 58 EGDVICFNDSTII-----NHMFICKTRQNRLIKIVLEGFLPNNRVIISGLLKERLNANDV 112
Query: 115 LHFFSQDG-----------QSRLEATVIDKWNTGEILLVFSISGIELERQIS--LVGTIP 161
+ +S+ A V N ++ + G L+ + L P
Sbjct: 113 FYLVDNPEISIKIEQRFSEESQYRAVVE---NHEALICYLASHGERLDEYVDSSLFYKYP 169
Query: 162 LPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLH 221
Y++ ++K GS+ P+AG+HFT +L+ R+ G + F+TLH
Sbjct: 170 ----------------DAYRSVFSKKYGSLEIPSAGIHFTWDLIQRIKDKGGLISFITLH 213
Query: 222 VGAGTF---MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET 278
V + ++ + ++ ++ E + TA +N+ K GGRI +VGTT R LE+
Sbjct: 214 VASTEMLSNRKIQTKCVEEVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLES 273
Query: 279 A-TTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMY 337
A + E + SG+T ++I PGY+ + VD L++N H PK+T ++L F G++ K Y
Sbjct: 274 AYSREHNCLKASSGWTALYIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLIKAY 333
Query: 338 QHAISHAYRFYSYGDTSLLFQKR 360
+ +F +GD L+ Q
Sbjct: 334 TSEHIQSCQFDMFGDCMLIIQDE 356
>gi|302550473|ref|ZP_07302815.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces viridochromogenes DSM 40736]
gi|302468091|gb|EFL31184.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces viridochromogenes DSM 40736]
Length = 347
Score = 242 bits (619), Expect = 5e-62, Method: Composition-based stats.
Identities = 90/364 (24%), Positives = 163/364 (44%), Gaps = 40/364 (10%)
Query: 11 PPSRIALRPVF------PRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
P A PV RD+ R++V S ++ H ++LP L + D +V N +
Sbjct: 8 PEELSARVPVEQRGPGLDRDAVRMLV-----SRGTEVAHHTFTELPRVLRAWDLLVVNTS 62
Query: 65 KVITAQLNG-----VRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
+ A ++G H + R + + +R + R G +
Sbjct: 63 ATLAAAVDGWSGHTRVVVHFSTRGDDGRWAVELREPDGRGTTRPRAGGP--AGTEVCL-- 118
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
G RL + E L ++G + + G Y R +P+
Sbjct: 119 -PGGVRLVLEEPLSGRS-ERLWWARVAGPGVVGLLREHGRPIRYAYTERDQPLSV----- 171
Query: 180 YQTTYA----KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
YQT +A GS P+A FT+ +++ L+S G+++ VTLH G V
Sbjct: 172 YQTIFALPSADGAGSAEMPSAARPFTARVVAELVSRGVRLAPVTLHTG--------VASA 223
Query: 236 DDH-IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTN 294
+ H + E + +A+ +N+ K+ GGR+V+VGTT++R +E+A DG++ P +G+T
Sbjct: 224 EAHEPPYPERFAVPEASARLINATKAGGGRVVAVGTTAVRAVESAAGADGVVRPRAGWTG 283
Query: 295 IFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTS 354
+ +TP R VD L++ H P+++ L+++ A G ++ Y+ A+ Y ++ +GD
Sbjct: 284 LVVTPERGVRVVDGLLTGLHEPEASHLLMLEAVAGRVAVERGYEAALQGRYLWHEFGDVH 343
Query: 355 LLFQ 358
L+ +
Sbjct: 344 LVLR 347
>gi|226359753|ref|YP_002777531.1| S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Rhodococcus opacus B4]
gi|226238238|dbj|BAH48586.1| putative S-adenosylmethionine--tRNA ribosyltransferase-isomerase
[Rhodococcus opacus B4]
Length = 352
Score = 242 bits (618), Expect = 6e-62, Method: Composition-based stats.
Identities = 94/369 (25%), Positives = 157/369 (42%), Gaps = 37/369 (10%)
Query: 3 VKEFDFDLPPSRIALRPVFPR----DSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDA 58
V EF F LP A P R DS +L+V + DLP FL S D
Sbjct: 9 VTEFRFVLPQRLEASGPPEERGLLRDSVKLLVSDRGN-----LVHSTFHDLPHFLRSGDV 63
Query: 59 IVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARP----SKVIK-KGD 113
+V N + + A ++G + + W++ R S + G
Sbjct: 64 VVVNASATLAAAVDGTV-----DTVGPVVVHFSTELEGGEWALEVRAPGLVSGALDSVGA 118
Query: 114 ILHFFSQDGQSRLEATVIDKWNTGE-ILLVFSISGIEL--ERQISLVGTIPLPPYIARKR 170
+ G AT+ + W G L SI G+ ++ G YI +
Sbjct: 119 GVRIRLSRGA---VATLHEPWPRGSTRLWRASIDGVADVAAELLATAGRPITYAYIHDRW 175
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
P+ YQT + + GS +A FT +++ L + G+ + LH G + P
Sbjct: 176 PL-----GYYQTIFGRTGGSAEMASAARPFTHPIVTELATSGVVTAPILLHTGVSS--PE 228
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWS 290
+ E E + TA+ +N ++ GGR+++VGTT R LET T DG+
Sbjct: 229 RGEPPI-----PERYDVPEHTARLINDRRAEGGRVIAVGTTVTRALETRATPDGLAVAGG 283
Query: 291 GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSY 350
G+TN+ ++ R VD L++ +H P ++ LML+ + G ++ Y A++ Y ++ +
Sbjct: 284 GWTNLVLSARRPARVVDGLITGWHAPGASHLMLLESVVGAAAVRRAYDEALARGYLWHEF 343
Query: 351 GDTSLLFQK 359
GD++LL ++
Sbjct: 344 GDSALLLRR 352
>gi|326780149|ref|ZP_08239414.1| Queuosine biosynthesis protein [Streptomyces cf. griseus XylebKG-1]
gi|326660482|gb|EGE45328.1| Queuosine biosynthesis protein [Streptomyces cf. griseus XylebKG-1]
Length = 440
Score = 241 bits (616), Expect = 1e-61, Method: Composition-based stats.
Identities = 90/373 (24%), Positives = 162/373 (43%), Gaps = 49/373 (13%)
Query: 11 PPSRIALRPVFPR----DSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKV 66
P + A P R D RL+V S +S H +LP + + D +V N +
Sbjct: 82 PDALSARVPAEQRGSGRDDVRLLV-----SRGCAVSHHAFRELPGQVRAGDVLVVNTSMT 136
Query: 67 ITAQLNGVR-----FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
+ A +NG H + R + + +R + + RP G ++
Sbjct: 137 LPAAVNGRVGGERVVVHFSTRGADGRWAVELRAPGRAGATGPRPGGP--AGAVVRLPGG- 193
Query: 122 GQSRLEATVIDK--WNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
A V+++ L ++ + + + G Y R +P+ A
Sbjct: 194 -----RALVLEEPLGPVAGARLWWARTPERVPELLRRYGRPIRYGYTERDQPLSA----- 243
Query: 180 YQTTYA----KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
Y+T +A GS P+AG FT+ L++ L+ G+ ++LH G V
Sbjct: 244 YRTVFATPSPDGSGSAEMPSAGRPFTAALVAGLVRRGVLFAPLSLHTG--------VASA 295
Query: 236 DDH-IMHSEIGFIDAPTAQALNSVKSR-------GGRIVSVGTTSLRLLETATTEDGIIN 287
+ H + E + A TA +N+V++ GGR+++VGTT++R LE+A DG++
Sbjct: 296 EAHEPPYPERFAVPAATAWLVNAVRAARGGDRAAGGRVIAVGTTAVRALESAAGADGVVR 355
Query: 288 PWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
G+T++ +TP R VD L++ H P+++ L+++ A G E + Y+ A+ Y +
Sbjct: 356 QAEGWTDLVVTPRRGVRVVDGLLTGLHEPEASHLLMLEAVAGREALRLGYEAALQERYLW 415
Query: 348 YSYGDTSLLFQKR 360
+ +GD L+
Sbjct: 416 HEFGDVHLILPDE 428
>gi|182439485|ref|YP_001827204.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces griseus subsp. griseus NBRC 13350]
gi|178468001|dbj|BAG22521.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces griseus subsp. griseus NBRC 13350]
Length = 440
Score = 241 bits (616), Expect = 1e-61, Method: Composition-based stats.
Identities = 90/373 (24%), Positives = 162/373 (43%), Gaps = 49/373 (13%)
Query: 11 PPSRIALRPVFPR----DSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKV 66
P + A P R D RL+V S +S H +LP + + D +V N +
Sbjct: 82 PDALSARVPAEQRGSGRDDVRLLV-----SRGCAVSHHAFRELPGQVRAGDVLVVNTSMT 136
Query: 67 ITAQLNGVR-----FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
+ A +NG H + R + + +R + + RP G ++
Sbjct: 137 LPAAVNGRVGGERVVVHFSTRGADGRWAVELRAPGRAGATGPRPGGP--AGAVVRLPGG- 193
Query: 122 GQSRLEATVIDK--WNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
A V+++ L ++ + + + G Y R +P+ A
Sbjct: 194 -----RALVLEEPLGPVAGARLWWARTPERVPELLRRYGRPIRYGYTERDQPLSA----- 243
Query: 180 YQTTYA----KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDT 235
Y+T +A GS P+AG FT+ L++ L+ G+ ++LH G V
Sbjct: 244 YRTVFATPSQDGSGSAEMPSAGRPFTAALVAGLVRRGVLFAPLSLHTG--------VASA 295
Query: 236 DDH-IMHSEIGFIDAPTAQALNSVKSR-------GGRIVSVGTTSLRLLETATTEDGIIN 287
+ H + E + A TA +N+V++ GGR+++VGTT++R LE+A DG++
Sbjct: 296 EAHEPPYPERFAVPAATAWLVNAVRAARGGDRAAGGRVIAVGTTAVRALESAAGADGVVR 355
Query: 288 PWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRF 347
G+T++ +TP R VD L++ H P+++ L+++ A G E + Y+ A+ Y +
Sbjct: 356 QAEGWTDLVVTPRRGVRVVDGLLTGLHEPEASHLLMLEAVAGREALRLGYEAALQERYLW 415
Query: 348 YSYGDTSLLFQKR 360
+ +GD L+
Sbjct: 416 HEFGDVHLILPDE 428
>gi|298250612|ref|ZP_06974416.1| Queuosine biosynthesis protein [Ktedonobacter racemifer DSM 44963]
gi|297548616|gb|EFH82483.1| Queuosine biosynthesis protein [Ktedonobacter racemifer DSM 44963]
Length = 362
Score = 240 bits (614), Expect = 2e-61, Method: Composition-based stats.
Identities = 99/375 (26%), Positives = 158/375 (42%), Gaps = 44/375 (11%)
Query: 4 KEFDFDLPPSRIALRPVFPR----DSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAI 59
DF LP A RP R D RLMV + I ++ FL D +
Sbjct: 12 ASLDFVLPAELEATRPPEARGLARDEVRLMVSYR---ANDHILHDRFREIEHFLEPGDLL 68
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI-LHFF 118
V N + + A L+ R + L + N W V +K+G+ F
Sbjct: 69 VVNTSGTMNAALSATRADGTP-----LEVHLSTHLPANLWIVEV----RLKQGERTFPFS 119
Query: 119 SQDGQSRL------EATVIDKWNTGEILLVFSISGIELERQISLVGTI--PLPPY----- 165
R+ ++ ++ GE L + R + PL Y
Sbjct: 120 EMQAGERVPLPGGASLHLLTPYSAGEGRLQPARQ-----RLWIATIELASPLQEYLASYG 174
Query: 166 --IARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVG 223
I +A YQT YA GS P+AG FT L++RL++ GI++ + LH G
Sbjct: 175 FPIRYNYVPEAWPLEYYQTVYATEYGSAEMPSAGRAFTPELIARLVARGIQIVPLLLHTG 234
Query: 224 AGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTED 283
+ + + + + TA+++N+ + R+V+VGTT +R LET T D
Sbjct: 235 VSSLEEHEPPYEEYYR-------VPVETAKSINTAHANHKRVVAVGTTVVRALETVTDVD 287
Query: 284 GIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISH 343
G+ +P G+T + ITP RAV+ L++ H P+++ L+++ A G E +K Y A+
Sbjct: 288 GVTHPGEGWTRLVITPQRGLRAVNALLTGLHEPRASHLLMLEALAGREHLRKTYAAALQE 347
Query: 344 AYRFYSYGDTSLLFQ 358
Y ++ +GD LL
Sbjct: 348 QYLWHEFGDLHLLLP 362
>gi|290961493|ref|YP_003492675.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces scabiei 87.22]
gi|260651019|emb|CBG74137.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces scabiei 87.22]
Length = 384
Score = 239 bits (610), Expect = 5e-61, Method: Composition-based stats.
Identities = 87/378 (23%), Positives = 156/378 (41%), Gaps = 50/378 (13%)
Query: 11 PPSRIALRPVF------PRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
P A P RD RLMV S +S H+ ++LP L + D +V N +
Sbjct: 9 PEGLHARVPAEQRGPGLDRDGVRLMV-----SRGTEVSHHVFAELPRLLGAGDLLVVNTS 63
Query: 65 KVITAQLNG-----VRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF-- 117
+ A ++G H + R + + +R + R G +
Sbjct: 64 PTLAAAVDGTVGDARVVVHFSTRGDDGRWAVELRDPDGHGTTRVRAGGP--AGTRVRLPC 121
Query: 118 ---------FSQDGQSRLEATVI---DKWNTGEILLVFSISGIELERQISLVGTIPLPPY 165
S G+ A V ++ + + G Y
Sbjct: 122 EVRLVLEEPLSARGERLWWARVSLPSPEFPASPASSASPGPSEAVAEVLREHGRPIRYSY 181
Query: 166 IARKRPIDARDYVDYQTTYA----KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLH 221
R +P+ YQT +A GS P+AG FT+ +++ L+S G++ VTLH
Sbjct: 182 TERDQPLSV-----YQTVFALPSQDGAGSAEMPSAGRPFTARMVAELVSRGVQFAPVTLH 236
Query: 222 VGAGTFMPVKVEDTDDH-IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT 280
G V + H + E + +A+ +N+ ++ G R+++VGTT++R +E+A
Sbjct: 237 TG--------VASAEAHEPPYPERFSVPEASARLVNAARAGGRRVIAVGTTAVRAVESAA 288
Query: 281 TEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHA 340
DG++ G+T++ +TP R VD L++ H P+++ L+++ A G + Y+ A
Sbjct: 289 GPDGVVRARDGWTDLVVTPERGVRVVDGLLTGLHEPEASHLLMLEAVAGRAAIDRSYEAA 348
Query: 341 ISHAYRFYSYGDTSLLFQ 358
+ Y ++ +GD L+
Sbjct: 349 VEGRYLWHEFGDVHLVLP 366
>gi|329940706|ref|ZP_08289986.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces griseoaurantiacus M045]
gi|329300000|gb|EGG43898.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces griseoaurantiacus M045]
Length = 415
Score = 238 bits (608), Expect = 8e-61, Method: Composition-based stats.
Identities = 97/421 (23%), Positives = 170/421 (40%), Gaps = 91/421 (21%)
Query: 11 PPSRIALRPVFPR------DSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
P A P R D+ RL+V S ++ H +LP L + D ++ N +
Sbjct: 13 PEELSARVPAERRGPGLGRDAVRLLV-----SRGTEVTHHAFPELPGLLRAGDLLLVNTS 67
Query: 65 KVITAQLNGV-----RFCHINRREKEISCTLHMRVSPNSWSVYARPSK------------ 107
+ A +G H + R ++ + +R + R
Sbjct: 68 PTLAAAADGRLGSDRVVVHFSTRGEDGRWAVELRAPDGRGTTRPRAGGPAGAVVELAEGV 127
Query: 108 ----------------------------VIKKGDILHFFSQDGQSR-LEATVIDKWNTGE 138
++ G+ L DG +R EAT D T
Sbjct: 128 RLVLEEPLAAGSERLWWARAVAPWARDGRVRGGNALGGGPHDGGARDGEATGADATGTDA 187
Query: 139 I----------------LLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
+V ++ + G Y R +P+ A YQT
Sbjct: 188 RDGGTADAGTRDGGAAGRVVHPSGVADVPGLLRRHGRPIRYAYTERDQPLSA-----YQT 242
Query: 183 TYA----KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
+A GS P+A FT L++ L+S G++ +TLH G V + H
Sbjct: 243 VFALPGADGAGSAEMPSAARPFTPRLVAELVSRGVQFAPLTLHTG--------VASAEAH 294
Query: 239 -IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFI 297
+ E + +A+ +N+ ++ GGR+V+VGTT++R +E+A DGI+ +G+T++ +
Sbjct: 295 EPPYPERFAVPEASARLVNAARAGGGRVVAVGTTAVRAVESAAGADGIVRACAGWTDLVV 354
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
TPG R VD L++ H P+++ L+++ A G E ++ Y+ A++ Y ++ +GDT LL
Sbjct: 355 TPGRGVRVVDGLLTGLHEPEASHLLMLEAVAGREAVERGYEEALAGRYLWHEFGDTHLLL 414
Query: 358 Q 358
+
Sbjct: 415 R 415
>gi|225549313|ref|ZP_03770286.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi 94a]
gi|225370171|gb|EEG99611.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi 94a]
Length = 232
Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats.
Identities = 94/227 (41%), Positives = 131/227 (57%), Gaps = 7/227 (3%)
Query: 135 NTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAP 194
N+ E++L F+ E +PLP YI KR D D Y+T Y+K GS A+
Sbjct: 8 NSSEVVLKFNNDVG--EDYFEKHCFVPLPSYI--KRDYDKIDEDRYRTIYSKYVGSAASA 63
Query: 195 TAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQA 254
TAGLHF+ +L S + I+ F+TLHVG GTF+PV+ + ++H MH E I A
Sbjct: 64 TAGLHFSRDLFSVFENNNIEYDFITLHVGLGTFLPVRSKKVEEHNMHFETFLIKDFVAVR 123
Query: 255 LNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFITPG--YRFRAVDILMS 311
L + K G RI+S+ TT+LR LE++ + TN+FI PG Y F+ VD+L +
Sbjct: 124 LQNAKLLGKRILSIVTTTLRALESSYNNNLKEFKTGQQSTNLFIYPGKNYCFKFVDMLFT 183
Query: 312 NFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
NFH P+STLLMLVS+F G + Y+ AI+ Y+F+SYGD L+
Sbjct: 184 NFHTPQSTLLMLVSSFAGKDFVFSFYEEAINKGYKFFSYGDAMLILN 230
>gi|224533959|ref|ZP_03674544.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi CA-11.2a]
gi|224512962|gb|EEF83328.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi CA-11.2a]
Length = 232
Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats.
Identities = 94/227 (41%), Positives = 131/227 (57%), Gaps = 7/227 (3%)
Query: 135 NTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAP 194
N+ E++L F+ E +PLP YI KR D D Y+T Y+K GS A+
Sbjct: 8 NSSEVVLKFNNDVG--EDYFEKHCFVPLPSYI--KRDYDKIDEDRYRTIYSKYVGSAASA 63
Query: 195 TAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQA 254
TAGLHF+ +L S + I+ F+TLHVG GTF+PV+ + ++H MH E I A
Sbjct: 64 TAGLHFSRDLFSVFENNNIEYDFITLHVGLGTFLPVRSKKVEEHNMHFETFLIKDFVAVR 123
Query: 255 LNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFITPG--YRFRAVDILMS 311
L + K G RI+S+ TT+LR LE++ + TN+FI PG Y F+ VD+L +
Sbjct: 124 LQNAKLLGKRILSIVTTTLRALESSYNNNLKKFKTGQQSTNLFIYPGKNYCFKFVDMLFT 183
Query: 312 NFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
NFH P+STLLMLVS+F G + Y+ AI+ Y+F+SYGD L+
Sbjct: 184 NFHTPQSTLLMLVSSFAGKDFVFSFYEEAINKGYKFFSYGDAMLILN 230
>gi|16420070|gb|AAL20467.1| putative S-adenosylmethionine:tRNA-ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Typhimurium
str. LT2]
Length = 346
Score = 237 bits (605), Expect = 2e-60, Method: Composition-based stats.
Identities = 85/355 (23%), Positives = 155/355 (43%), Gaps = 44/355 (12%)
Query: 23 RDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRR 82
R+ +++V++ + I S L ++ D I FN++ +I F R+
Sbjct: 16 REKCKMLVLNRSKG---EIHKVDFSKLTDYIKEGDVICFNDSTII-----NHMFICKTRQ 67
Query: 83 EKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG-----------QSRLEATVI 131
+ I L + N + + + D+ + +S+ A V
Sbjct: 68 NRLIKIVLEGFLPNNRVIISGLLKERLNANDVFYLVDNPEISIKIEQRFSEESQYRAVVE 127
Query: 132 DKWNTGEILLVFSISGIELERQIS--LVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQG 189
N ++ + G L+ + L P Y++ ++K G
Sbjct: 128 ---NHEALICYLASHGERLDEYVDSSLFYKYP----------------DAYRSVFSKKYG 168
Query: 190 SVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF---MPVKVEDTDDHIMHSEIGF 246
S+ P+AG+HFT +L+ R+ G + F+TLHV + ++ + ++ ++ E
Sbjct: 169 SLEIPSAGIHFTWDLIQRIKDKGGLISFITLHVASTEMLSNRKIQTKCVEEVTINEEYYE 228
Query: 247 IDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWSGFTNIFITPGYRFRA 305
+ TA +N+ K GGRI +VGTT R LE+A + E + SG+T ++I PGY+ +
Sbjct: 229 VPQATADIINTAKQNGGRIFAVGTTVTRCLESAYSREHNCLKASSGWTALYIHPGYQLKV 288
Query: 306 VDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
VD L++N H PK+T ++L F G++ K Y + +F +GD L+ Q
Sbjct: 289 VDCLLTNLHQPKTTHMVLTGQFAGVDLLIKAYTSEHIQSCQFDMFGDCMLIIQDE 343
>gi|331695034|ref|YP_004331273.1| Queuosine biosynthesis protein [Pseudonocardia dioxanivorans
CB1190]
gi|326949723|gb|AEA23420.1| Queuosine biosynthesis protein [Pseudonocardia dioxanivorans
CB1190]
Length = 355
Score = 236 bits (603), Expect = 4e-60, Method: Composition-based stats.
Identities = 100/375 (26%), Positives = 163/375 (43%), Gaps = 39/375 (10%)
Query: 1 MMVKEFDFDLPPSRIALRPVF----PRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSN 56
M V F LP A P PRD RL+V + DL A L
Sbjct: 1 MTVS---FVLPDGLSATAPPESRGVPRDGVRLLVARAGR----PVRHRRFRDLAASLAPG 53
Query: 57 DAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYAR-PSK-VI---KK 111
D +V N + + A + G R + R + + + +P+ W V R P + + +
Sbjct: 54 DLVVVNTSTTVPAAVAGTR---GDGRPVVLHVSGPVPGAPDRWVVELRTPGRERVHDGRP 110
Query: 112 GDILHFFSQDGQSRLEATVIDKWNT----GEILLVFSISGIELERQISLVGTIPLPPYIA 167
G+++ + + L A D T ++ G L + L G PY+
Sbjct: 111 GEVVTLPAG-AHAVLVAAHPDLGATTSRLWRAIVETGTPGRGLADWLELHGRPITYPYLG 169
Query: 168 RKRPIDARDYVDYQTTYAKIQ---GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGA 224
PI+A ++T A+ S P+AG FT +L RL + G+ V + LH G
Sbjct: 170 TVPPIEA-----FRTVLARPVRGFASAEMPSAGRPFTGAVLDRLAARGVGVAELVLHTGV 224
Query: 225 GTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDG 284
+ + + + E + A TA A+N ++ GGR+V+VGTT R LET EDG
Sbjct: 225 SS------PEVGEPPL-PERFRVPARTADAVNRTRAVGGRVVAVGTTVTRALETVADEDG 277
Query: 285 IINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHA 344
+ SG+T++ + P R L++ +H P+++ L+L+ A G E Y A++
Sbjct: 278 TVRAGSGWTDLVLGPHRPARVTTGLVTGWHEPQASHLLLLEAVAGRELVAAAYGAALAEG 337
Query: 345 YRFYSYGDTSLLFQK 359
Y ++ +GD+ LL +
Sbjct: 338 YLWHEFGDSCLLLPR 352
>gi|291301223|ref|YP_003512501.1| Queuosine biosynthesis protein [Stackebrandtia nassauensis DSM
44728]
gi|290570443|gb|ADD43408.1| Queuosine biosynthesis protein [Stackebrandtia nassauensis DSM
44728]
Length = 338
Score = 235 bits (601), Expect = 6e-60, Method: Composition-based stats.
Identities = 101/358 (28%), Positives = 159/358 (44%), Gaps = 35/358 (9%)
Query: 6 FDFDLPPSRIALRPVFPR----DSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
F F L + A RP R D RL+ + LP L D +V
Sbjct: 8 FGFALDAALEAGRPPEDRGSGRDDVRLLYTDKATGRTVS---DGFRRLPGLLRPGDLLVV 64
Query: 62 NNTKVITAQLNGVR---FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFF 118
N++ + A + R +R + L RV + + + S I G++L
Sbjct: 65 NDSATLPAAVWMRRLVVHFSTDRGDGTWLVELRKRVGGH----HEQYSGGI-PGELLPLP 119
Query: 119 SQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYV 178
RLEA + + ++S R + G Y+ R P+D
Sbjct: 120 GG-ATLRLEARHTGRL----WIARMNVSVP---RYLGKHGVPIRYSYVDRDWPLD----- 166
Query: 179 DYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDH 238
YQT +A GS P+A FT+ ++ RL G+ + +TLH G V + D+
Sbjct: 167 RYQTVFATRPGSAEMPSAARPFTTAIVDRLRERGVTIAPITLHTG------VASPEVDE- 219
Query: 239 IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFIT 298
+ E I A TA+A+N+ ++ GGR+++VGTT++R LETA DG++ SGFT +T
Sbjct: 220 TPYPERFRIGASTARAVNAARAAGGRVIAVGTTAVRALETAVDGDGVVKAASGFTEHIVT 279
Query: 299 PGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
P RAVD +++ H P+ST L ++SA + Y AI+ Y ++ +GD L+
Sbjct: 280 PAVGVRAVDGILTGLHEPRSTHLSMLSAIVDNDVLASAYHKAIAERYLWHEFGDVHLI 337
>gi|161614013|ref|YP_001587978.1| hypothetical protein SPAB_01752 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|161363377|gb|ABX67145.1| hypothetical protein SPAB_01752 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 326
Score = 235 bits (600), Expect = 9e-60, Method: Composition-based stats.
Identities = 84/350 (24%), Positives = 152/350 (43%), Gaps = 44/350 (12%)
Query: 28 LMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEIS 87
++V++ + I S L ++ D I FN++ +I F R+ + I
Sbjct: 1 MLVLNRSKG---EIHKVDFSKLTDYIKEGDVICFNDSTII-----NHMFICKTRQNRLIK 52
Query: 88 CTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG-----------QSRLEATVIDKWNT 136
L + N + + + D+ + +S+ A V N
Sbjct: 53 IVLEGFLPNNRVIISGLLKERLNANDVFYLVDNPEISIKIEQRFSEESQYRAVVE---NH 109
Query: 137 GEILLVFSISGIELERQIS--LVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAP 194
++ + G L+ + L P Y++ ++K GS+ P
Sbjct: 110 EALICYLASHGERLDEYVDSSLFYKYP----------------DAYRSVFSKKYGSLEIP 153
Query: 195 TAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF---MPVKVEDTDDHIMHSEIGFIDAPT 251
+AG+HFT +L+ R+ G + F+TLHV + ++ + ++ ++ E + T
Sbjct: 154 SAGIHFTWDLIQRIKDKGGLISFITLHVASTEMLSNRKIQTKCVEEVTINEEYYEVPQAT 213
Query: 252 AQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWSGFTNIFITPGYRFRAVDILM 310
A +N+ K GGRI +VGTT R LE+A + E + SG+T ++I PGY+ + VD L+
Sbjct: 214 ADIINTAKQNGGRIFAVGTTVTRCLESAYSREYNCLKASSGWTALYIHPGYQLKVVDCLL 273
Query: 311 SNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
+N H PK+T ++L F G++ K Y + +F +GD L+ Q
Sbjct: 274 TNLHQPKTTHMVLTGQFAGVDLLMKAYASEDIQSCQFDMFGDCMLIIQDE 323
>gi|223889136|ref|ZP_03623725.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi 64b]
gi|223885385|gb|EEF56486.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi 64b]
Length = 232
Score = 235 bits (600), Expect = 9e-60, Method: Composition-based stats.
Identities = 91/227 (40%), Positives = 129/227 (56%), Gaps = 7/227 (3%)
Query: 135 NTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAP 194
N+ E++L F+ E +PLP YI KR D D YQT Y+K GS A+
Sbjct: 8 NSSEVVLKFNNDVG--EDYFEKHCFVPLPSYI--KRDYDKIDEDRYQTIYSKYVGSAASA 63
Query: 195 TAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQA 254
TAGLHF+ +L S + I+ F+TLHVG GTF+PV+ + ++ MH E I A
Sbjct: 64 TAGLHFSRDLFSAFENNNIEYDFITLHVGLGTFLPVRSKKVEERNMHFETFLIKDFVAVR 123
Query: 255 LNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFITPG--YRFRAVDILMS 311
L + K G RI+ + TT+LR LE++ + TN+FI PG Y F+ D+L +
Sbjct: 124 LQNAKLLGKRILPIVTTTLRALESSYDNNLKKFKTGQQSTNLFIYPGKNYCFKFFDMLFT 183
Query: 312 NFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
NFH+P+STLLMLVS+F G + Y+ A++ Y+F+SYGD L+
Sbjct: 184 NFHIPQSTLLMLVSSFAGKDFVFSSYKEAVNKGYKFFSYGDAMLILN 230
>gi|225549768|ref|ZP_03770733.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi 118a]
gi|225369728|gb|EEG99176.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi 118a]
Length = 232
Score = 234 bits (598), Expect = 1e-59, Method: Composition-based stats.
Identities = 93/227 (40%), Positives = 131/227 (57%), Gaps = 7/227 (3%)
Query: 135 NTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAP 194
N+ E++L F+ E +PLP YI KR D D Y+T Y+K GS A+
Sbjct: 8 NSSEVVLKFNNDVG--EDYFEKHCFVPLPSYI--KRDYDKIDEDRYRTIYSKYVGSAASA 63
Query: 195 TAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQA 254
TAGLHF+ +L S + I+ F+TL+VG GTF+PV+ + ++H MH E I A
Sbjct: 64 TAGLHFSRDLFSVFENNNIEYDFITLNVGLGTFLPVRSKKVEEHNMHFETFLIKDFVAVR 123
Query: 255 LNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFITPG--YRFRAVDILMS 311
L + K G RI+S+ TT+LR LE++ + TN+FI PG Y F+ VD+L +
Sbjct: 124 LQNAKLLGKRILSIVTTTLRALESSYNNNLKKFKTGQQSTNLFIYPGKNYCFKFVDMLFT 183
Query: 312 NFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
NFH P+STLLMLVS+F G + Y+ AI+ Y+F+SYGD L+
Sbjct: 184 NFHTPQSTLLMLVSSFAGKDFVFSFYEEAINKGYKFFSYGDAMLILN 230
>gi|221217423|ref|ZP_03588894.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi 72a]
gi|221192701|gb|EEE18917.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi 72a]
Length = 232
Score = 233 bits (596), Expect = 2e-59, Method: Composition-based stats.
Identities = 93/227 (40%), Positives = 130/227 (57%), Gaps = 7/227 (3%)
Query: 135 NTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAP 194
N+ E++L F+ E +PLP YI KR D Y+T Y+K GS A+
Sbjct: 8 NSSEVVLKFNNDVG--EDYFEKHCFVPLPSYI--KRDYYKIDEDRYRTIYSKYVGSAASA 63
Query: 195 TAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQA 254
TAGLHF+ +L S + I+ F+TLHVG GTF+PV+ + ++H MH E I A
Sbjct: 64 TAGLHFSRDLFSVFENNNIEYDFITLHVGLGTFLPVRSKKVEEHNMHFETFLIKDFVAVR 123
Query: 255 LNSVKSRGGRIVSVGTTSLRLLETATTED-GIINPWSGFTNIFITPG--YRFRAVDILMS 311
L + K G RI+S+ TT+LR LE++ + TN+FI PG Y F+ VD+L +
Sbjct: 124 LQNAKLLGKRILSIVTTTLRALESSYNNNLKKFKTGQQSTNLFIYPGKNYCFKFVDMLFT 183
Query: 312 NFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
NFH P+STLLMLVS+F G + Y+ AI+ Y+F+SYGD L+
Sbjct: 184 NFHTPQSTLLMLVSSFAGKDFVFSFYEEAINKGYKFFSYGDAMLILN 230
>gi|29833016|ref|NP_827650.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces avermitilis MA-4680]
gi|29610137|dbj|BAC74185.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces avermitilis MA-4680]
Length = 410
Score = 233 bits (595), Expect = 3e-59, Method: Composition-based stats.
Identities = 91/382 (23%), Positives = 162/382 (42%), Gaps = 56/382 (14%)
Query: 11 PPSRIALRPVF------PRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
P A P RDS RL+V S +S H +LP L + D +V N +
Sbjct: 16 PEELSARVPAEQRGPGLDRDSVRLLV-----SRGTEVSHHDFVELPRQLRAGDLLVVNTS 70
Query: 65 KVITAQLNGV-----RFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
+ A ++G H + R ++ + +R + AR G +
Sbjct: 71 PTLAAAVDGRIGHARVVVHFSTRGEDGRWAVELRDPDGRGTTRARTGGP--AGTEVRL-- 126
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGI-ELERQISLVGTIPLPPYIARKRPIDARDYV 178
DG + + + S G ++ + G Y R +P+
Sbjct: 127 PDGVRLVLEEPLAGRSERLWWARVSAPGDADVTVLLRGHGRPIRYSYTERDQPLSV---- 182
Query: 179 DYQTTYA----KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
YQT +A GS P+A FT+ L++ L+S G++ +TLH G V
Sbjct: 183 -YQTVFALPSADGAGSAEMPSAARPFTARLVAELVSRGVQFAPITLHTG--------VAS 233
Query: 235 TDDH-IMHSEIGFIDAPTAQALNSVKSR-----------------GGRIVSVGTTSLRLL 276
+ H + E + +A+ +N+ ++ GGR+++VGTT++R +
Sbjct: 234 AEAHEPPYPERFAVPEASARLINAARAHRTPREASSSRGGDGSREGGRVIAVGTTAVRAV 293
Query: 277 ETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKM 336
E+AT DG++ P G+T++ +TP RAVD L++ H P+++ L+++ A G +
Sbjct: 294 ESATGTDGVVRPAEGWTDLVVTPERGVRAVDGLLTGLHEPEASHLLMLEALAGRTAIDRS 353
Query: 337 YQHAISHAYRFYSYGDTSLLFQ 358
Y+ A++ Y ++ +GD L+
Sbjct: 354 YEEALAGLYLWHEFGDLHLILP 375
>gi|330895867|gb|EGH28153.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. japonica str. M301072PT]
Length = 161
Score = 231 bits (589), Expect = 1e-58, Method: Composition-based stats.
Identities = 79/146 (54%), Positives = 102/146 (69%), Gaps = 1/146 (0%)
Query: 213 IKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTS 272
++ FVTLHVGAGTF PV+VE +DH MHSE + A+ + ++RGGR+++VGTTS
Sbjct: 1 METAFVTLHVGAGTFQPVRVEQIEDHHMHSEWLEVGQDVVDAVTACRARGGRVIAVGTTS 60
Query: 273 LRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEE 332
+R LE+A DG + P+SG T+IFI PG F VD L++NFHLP+STLLMLVSAF G E
Sbjct: 61 VRSLESAAR-DGELKPFSGDTDIFIYPGRPFHVVDALVTNFHLPESTLLMLVSAFAGYPE 119
Query: 333 TKKMYQHAISHAYRFYSYGDTSLLFQ 358
T Y AI H YRF+SYGD + +
Sbjct: 120 TMAAYAAAIEHGYRFFSYGDAMFITR 145
>gi|239932119|ref|ZP_04689072.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces ghanaensis ATCC 14672]
gi|291440489|ref|ZP_06579879.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces ghanaensis ATCC 14672]
gi|291343384|gb|EFE70340.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces ghanaensis ATCC 14672]
Length = 377
Score = 229 bits (585), Expect = 4e-58, Method: Composition-based stats.
Identities = 90/378 (23%), Positives = 161/378 (42%), Gaps = 48/378 (12%)
Query: 11 PPSRIALRPVF------PRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
P A PV RDS RL+V S +S H +LP L + D +V N +
Sbjct: 8 PEELSARVPVEQRGPGLDRDSVRLLV-----SRGTAVSHHAFVELPWLLRAGDLLVVNTS 62
Query: 65 KVITAQLNG-----VRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
+ A ++G H + R + + +R + R +
Sbjct: 63 PTLAAAVDGWIGHTRVVVHFSTRGDDGRWAVELRDPDGRGTT--RARGRGGEPGAPRGGG 120
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISL------------VGTIPLPPYIA 167
G++ A + G L++ ER G Y
Sbjct: 121 GGGRAGGPAGTEVRLVGGARLVLEEPLSARGERLWWARVSRDVPGVLREHGRPIRYAYTE 180
Query: 168 RKRPIDARDYVDYQTTYA----KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVG 223
R +P+ A YQT +A + GS P+AG FT+ +++ L+S G++ V LH G
Sbjct: 181 RDQPLSA-----YQTVFALPSPEGTGSAEMPSAGRPFTARMVAELVSRGVQFAPVVLHAG 235
Query: 224 AGTFMPVKVEDTDDH-IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE 282
V + H + E + +A+ + +V++ GGR+++VGTT++R +E+A
Sbjct: 236 --------VASAEAHEPPYPERFVVPEASARLVGAVRAGGGRVIAVGTTAVRAVESAAGA 287
Query: 283 DGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAIS 342
DG++ +G+T++ +TP R VD L++ H P+++ L+++ A G + Y+ A+
Sbjct: 288 DGVVRARAGWTDLVVTPERGVRVVDGLLTGLHEPEASHLLMLEAVAGRAAVDRGYEEALH 347
Query: 343 HAYRFYSYGDTSLLFQKR 360
Y ++ +GD L+ +
Sbjct: 348 GRYLWHEFGDVHLVLPEE 365
>gi|167860510|gb|ACA05032.1| S-adenosylmethionine: tRNA ribosyltransferase-isomerase
[Flammeovirga yaeyamensis]
Length = 255
Score = 226 bits (576), Expect = 5e-57, Method: Composition-based stats.
Identities = 98/262 (37%), Positives = 136/262 (51%), Gaps = 51/262 (19%)
Query: 142 VFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFT 201
+ + IS G PLPPYI KR D YQT Y+K +G+VAAPTAGLHFT
Sbjct: 1 EWEEESLNFVDIISAAGNTPLPPYI--KRTATEDDKETYQTVYSKNEGAVAAPTAGLHFT 58
Query: 202 SNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSR 261
+ +L L + G+ VTLHV AGTF P+ + DH MH+E I +AL
Sbjct: 59 NEVLDVLKNQGVDEQEVTLHVSAGTFKPITADKVTDHDMHNEQIIITKENVKALIEA--- 115
Query: 262 GGRIVSVGTTSLRLLETA------------------------TTEDGIINPWS------- 290
++ VGTTS+R LE++ E G+ P
Sbjct: 116 -NKVACVGTTSMRTLESSYWYGVRLLLDNNSTFDIQKLEAYERMESGVTLPSRQESFGAI 174
Query: 291 -------------GFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMY 337
G T+IFI PGY+F+ +D L++NFHLP +TL++L++AF G + +K+Y
Sbjct: 175 LKHMEEHNLDTIHGETSIFIMPGYQFQVIDTLVTNFHLPSTTLVLLIAAFIGED-WRKVY 233
Query: 338 QHAISHAYRFYSYGDTSLLFQK 359
Q A+ + YRF SYGD+S+LF+K
Sbjct: 234 QAALDNDYRFLSYGDSSILFRK 255
>gi|255019226|ref|ZP_05291352.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL F2-515]
Length = 174
Score = 224 bits (572), Expect = 1e-56, Method: Composition-based stats.
Identities = 87/179 (48%), Positives = 119/179 (66%), Gaps = 6/179 (3%)
Query: 129 TVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQ 188
T +++ G +L FS GI + +G +PLPPYI + D YQT YAK
Sbjct: 1 TCLEELEHGGRILEFSYEGI-FYEVLEQLGEMPLPPYIKEQLA----DQDRYQTVYAKEN 55
Query: 189 GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFID 248
GS AAPTAGLHFT +LL ++ + G+++ FVTLHVG GTF PV VEDT +H MHSE +
Sbjct: 56 GSAAAPTAGLHFTEDLLEQISAKGVEIIFVTLHVGLGTFRPVDVEDTTNHKMHSEFYRLT 115
Query: 249 APTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITPGYRFRAV 306
+A+ +N +K++GG++V+VGTTS+R LET A+ DG + SG+T IFI+PGY F+AV
Sbjct: 116 EESAERINKIKAQGGKVVAVGTTSIRTLETIASRHDGKLVAESGWTEIFISPGYTFQAV 174
>gi|213581763|ref|ZP_03363589.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Typhi str. E98-0664]
Length = 332
Score = 224 bits (572), Expect = 2e-56, Method: Composition-based stats.
Identities = 83/358 (23%), Positives = 157/358 (43%), Gaps = 48/358 (13%)
Query: 1 MMVKEFDFDLPPSR-IALRPVFP-----RDSARLMVVHPNLSCPLVISDHLVSDLPAFLN 54
M+ +++DF + I LRP + R+ +++V++ + I S + ++
Sbjct: 1 MLTEKYDFRITDQMTIPLRPHWIANDSYREKCKMLVLNRSKG---EIHKVDFSKVTDYIK 57
Query: 55 SNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
D I FN++ +I F RR + I L + N + + + D+
Sbjct: 58 EGDVICFNDSTII-----NHMFICKTRRNRLIKIVLEGFLLNNRVIISGLLKERLNANDV 112
Query: 115 LHFFSQD----------GQSRLEATVIDKWNTGEILLVFSISGIELERQIS--LVGTIPL 162
+ G+ V++ ++ + G L+ + L P
Sbjct: 113 FYLVDNPEISIKIEQRFGEESQYRAVVENHEA--LICYLASHGERLDEYVDSSLFYKYP- 169
Query: 163 PPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHV 222
Y++ ++K GS+ P+AG+HFT +L+ ++ G + F+TLHV
Sbjct: 170 ---------------DAYRSVFSKKYGSLEIPSAGIHFTWDLIQKIKDKGGLISFITLHV 214
Query: 223 GAGTF---MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA 279
+ ++ + ++ ++ E + TA +N+ K GGRI +VGTT R LE+A
Sbjct: 215 ASTEMLSNRKIQTKCVEEVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLESA 274
Query: 280 -TTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKM 336
+ E + SG+T ++I PGY+ + VD L++N H PK+T ++L F G++ K
Sbjct: 275 YSREHNCLKASSGWTALYIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLMKA 332
>gi|237755939|ref|ZP_04584528.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sulfurihydrogenibium yellowstonense SS-5]
gi|237691888|gb|EEP60907.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sulfurihydrogenibium yellowstonense SS-5]
Length = 190
Score = 223 bits (570), Expect = 3e-56, Method: Composition-based stats.
Identities = 67/207 (32%), Positives = 98/207 (47%), Gaps = 17/207 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FD+ LP IA P PRDS RLMV+ I + D+ +L D +V
Sbjct: 1 MKLSDFDYHLPKELIAKYPAQPRDSCRLMVLDRKDKT---IEHRIFRDVIDYLKPGDTLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNTKVI A+L G + + I L + N W + + +KK +
Sbjct: 58 LNNTKVIPARLIGKK----EKTNANIEVFLLRPIEDNIWEALIKNVRRLKKNQKIIISDD 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
+ K + I+ I +++ + G IPLPPYI +R + +D Y
Sbjct: 114 -----FYVEFLSKDDEKAIV---KIHSKDIKSDLEKYGHIPLPPYI--EREDEEKDKDYY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSR 207
QT +A+ +GSVA+PTAGLHFT LL +
Sbjct: 164 QTVFAEKEGSVASPTAGLHFTKELLEK 190
>gi|224532557|ref|ZP_03673180.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi WI91-23]
gi|224512500|gb|EEF82878.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi WI91-23]
Length = 272
Score = 222 bits (565), Expect = 8e-56, Method: Composition-based stats.
Identities = 95/276 (34%), Positives = 138/276 (50%), Gaps = 19/276 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF F+LP S IA P R S+RLMV+ P L + ++ V+++ ++NSN I+
Sbjct: 1 MKTKEFHFNLPHSLIAQYPSEKRGSSRLMVLDPQLQK--IYHENSVNNILKYINSNIFII 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+KV +++ N + R+ N ++ SK G+ F
Sbjct: 59 FNNSKVRKSRIYVESEMSSN-------FLILDRIDTNLFTALVSKSKKQIIGNFYKFPEG 111
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L N+ E++L F+ E +PLP YI KR D D Y
Sbjct: 112 LMGEILS------KNSSEVVLKFNNDVG--EDYFEKHCFVPLPSYI--KRDYDKIDEDRY 161
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
+T Y+K GS A+ TAGLHF+ +L S + I+ F+TLHVG GTF+PV+ + ++H M
Sbjct: 162 RTIYSKYVGSAASATAGLHFSIDLFSVFENNNIEYDFITLHVGLGTFLPVRSKKVEEHDM 221
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLL 276
H E I A L + K G RI+S+ TT+LR L
Sbjct: 222 HFETFLIKDFVAVRLQNAKLLGKRILSIVTTTLRFL 257
>gi|47094637|ref|ZP_00232269.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes str. 4b H7858]
gi|47016987|gb|EAL07888.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes str. 4b H7858]
Length = 174
Score = 222 bits (565), Expect = 9e-56, Method: Composition-based stats.
Identities = 64/187 (34%), Positives = 97/187 (51%), Gaps = 16/187 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++LN DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKKSGD---IKDQHFTDIISYLNEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+T+V+ A+L+G++ + I L + N+W +P+K I+KG + F
Sbjct: 58 LNDTRVLPARLHGIK----DETGAHIEVLLLKQKEGNAWETLVKPAKRIRKGATITF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
G L+A +++ G +L FS GI + +G +PLPPYI + D Y
Sbjct: 111 -GDGALKAICLEELEHGGRILEFSYEGI-FYEVLEQLGEMPLPPYIKEQLA----DQDRY 164
Query: 181 QTTYAKI 187
QT YAK
Sbjct: 165 QTVYAKE 171
>gi|237756796|ref|ZP_04585286.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sulfurihydrogenibium yellowstonense SS-5]
gi|237691048|gb|EEP60166.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Sulfurihydrogenibium yellowstonense SS-5]
Length = 147
Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats.
Identities = 70/150 (46%), Positives = 89/150 (59%), Gaps = 4/150 (2%)
Query: 207 RLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIV 266
++ G+ + ++TLHVG GTF PVK ED H MH E I T + + K +V
Sbjct: 1 KIKEKGVNIAYITLHVGLGTFKPVKTEDITKHKMHEEYFTIPKETLEMIKKTKENKKSVV 60
Query: 267 SVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSA 326
+VGTT +R LET G GFT+IFI P Y F+ VD L++NFHLPKSTLLMLVSA
Sbjct: 61 AVGTTVVRALETY----GKFGKTEGFTDIFIYPPYEFKIVDKLITNFHLPKSTLLMLVSA 116
Query: 327 FCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
F + K Y A+ YRF+SYGD L+
Sbjct: 117 FADRDFILKAYNEAVKERYRFFSYGDAMLI 146
>gi|162453253|ref|YP_001615620.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Sorangium
cellulosum 'So ce 56']
gi|161163835|emb|CAN95140.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Sorangium
cellulosum 'So ce 56']
Length = 341
Score = 215 bits (549), Expect = 6e-54, Method: Composition-based stats.
Identities = 88/358 (24%), Positives = 133/358 (37%), Gaps = 37/358 (10%)
Query: 16 ALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVR 75
A P RL+ V P + D ++DLPA L D +V N+ + A L+G
Sbjct: 4 ATWPRENPLEERLLHVDPRAG---RLRDARIADLPALLEPGDLLVVNDGATMPASLHG-- 58
Query: 76 FCHINRREKEISCTLHMRVSPNSWSVYARPSK-------------VIKKGDILHFFSQDG 122
R + L +S +S + + GD + F
Sbjct: 59 ---ATERGAAVEVRLIGELSEGRYSALLFGAGDWHTRTEDRPAPPALGPGDAVTFGED-- 113
Query: 123 QSRLEATVIDKWNTGEILLVFSIS--GIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L ATV L+ + G L + G Y+A I
Sbjct: 114 ---LSATVERVSPASPRLVEIAFHERGAPLWSALYRRGRPIQYAYVAGPLEI-----WHA 165
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT YA P+AG LL LI G++V +T G + D +
Sbjct: 166 QTRYASRPLCAELPSAGRPLVWGLLLELIRRGVRVASLTHAAGISSTG---EPALDALLP 222
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE-TATTEDGIINPWSGFTNIFITP 299
E I T A+ K+RG R+++VGTT R LE A G + +G T++ + P
Sbjct: 223 LPERFDIPEETVAAVREAKARGRRVIAVGTTVTRALEGCAAQHGGELRAGAGVTDLMLHP 282
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
G+R R VD L++ H P + L+ AF + +A Y + +GD+ L+
Sbjct: 283 GFRPRVVDGLLTGVHDPTESHFRLLEAFAPASLLHRANSYAEEAGYLCHEFGDSYLVL 340
>gi|34763570|ref|ZP_00144505.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium nucleatum subsp. vincentii ATCC 49256]
gi|27886759|gb|EAA23897.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium nucleatum subsp. vincentii ATCC 49256]
Length = 222
Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats.
Identities = 68/214 (31%), Positives = 105/214 (49%), Gaps = 16/214 (7%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFN 62
+ ++D+ LP I +P PRDSA+LM++ I ++ +L D +V N
Sbjct: 13 LSDYDYFLPEELIGQKPREPRDSAKLMLIDRKTGS---IEHKHFYNIVDYLQKGDVLVRN 69
Query: 63 NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDG 122
TKVI A++ G + + L R+S ++W +P+K +K G L+
Sbjct: 70 ATKVIPARIFGHK-----DTGGVLEILLIKRISLDTWECLLKPAKKLKLGQKLYIGENK- 123
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
L A +++ G +L F G E + +G++PLPPYI RK YQT
Sbjct: 124 --ELIAELLEIKEDGNRILKFYYEG-SFEEILDKLGSMPLPPYITRKLEN----KDRYQT 176
Query: 183 TYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVY 216
YA+ SVAAPTAGLHFT LL +++ G+ +
Sbjct: 177 VYAQRGESVAAPTAGLHFTEELLKKILDKGVVIV 210
>gi|312147903|gb|ADQ30562.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi JD1]
Length = 271
Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats.
Identities = 92/276 (33%), Positives = 136/276 (49%), Gaps = 20/276 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF F+LP S I P R S+RL+V+ P L + + V+++ ++NSN +
Sbjct: 1 MKTKEFHFNLPHSLIEQYPSEKRGSSRLIVLDPQLQK--IYHKNSVNNILKYINSN---I 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+K +++ N + + R+ N ++ SK G+ F
Sbjct: 56 FNNSKARKSRIYAESEMSSN-----VEFLILDRIGTNLFTALVSKSKKQIIGNFYKFPEG 110
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L N+ E++L F+ + E +PLP YI KR D D Y
Sbjct: 111 LMGEILS------KNSSEVVLKFNNNVG--EDYFEKHCFVPLPSYI--KRDYDKIDEDRY 160
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
QT Y+K GS A+ TAGLHF+ +L S + I+ F+TLHVG GTF+PV+ + ++H M
Sbjct: 161 QTIYSKYVGSTASATAGLHFSRDLFSAFENNNIEYDFITLHVGLGTFLPVRSKKVEEHDM 220
Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLL 276
H E I A L + K G RI+S+ TT+LR L
Sbjct: 221 HFETFLIKDFVAVRLQNAKLLGKRILSIVTTTLRFL 256
>gi|108761264|ref|YP_634449.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Myxococcus xanthus DK 1622]
gi|108465144|gb|ABF90329.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Myxococcus xanthus DK 1622]
Length = 364
Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats.
Identities = 86/352 (24%), Positives = 138/352 (39%), Gaps = 26/352 (7%)
Query: 16 ALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVR 75
A P + RL+ V P D V+DLP+ L + D +V N+ + A L G
Sbjct: 27 ARWPADRPEEGRLLHVEPRAR---RYRDTRVADLPSLLRAGDLLVVNDAATLPASLVGR- 82
Query: 76 FCHINRREKEISCTLHMRVSPNSWSVYARPSKVIK-------KGDILHFFSQDGQSRLEA 128
+ I L R +W+ + + +L + L+A
Sbjct: 83 ----TESGERIELRLLSREPDGTWTGVLFGAGDWRRRTEDRPPPPVLAVGAGLVVGGLKA 138
Query: 129 TVIDKWNTGEILLVFSIS--GIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAK 186
V+ LL + G L + G Y+ + QT Y
Sbjct: 139 LVVAVLPPSPRLLRVAFDATGAALWSGLYRSGRPVQYAYLEAPLSL-----WHVQTAYGA 193
Query: 187 IQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGF 246
SV AP+AGL T ++L L G+++ +T G + D + E
Sbjct: 194 RPWSVEAPSAGLPLTWSVLLTLRKQGVRLASLTHAAGLSSTGDAA---LDAALPWPERSD 250
Query: 247 IDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITPGYRFRA 305
I A T +A+ ++ GGR+V+VGTT +R LE A G + T++ + PG+ R
Sbjct: 251 IPAATVEAVLHTRASGGRVVAVGTTVVRALEGRAARHGGWLVAGEEVTDLLLGPGFVPRL 310
Query: 306 VDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
V L + H P S L+ AF + +++ HA + Y + +GD+ LL
Sbjct: 311 VHGLFTGVHEPGSRHHALLQAFAPLPLLQEVAAHAEARGYLGHEFGDSCLLL 362
>gi|323271361|gb|EGA54787.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
Length = 203
Score = 209 bits (532), Expect = 7e-52, Method: Composition-based stats.
Identities = 61/185 (32%), Positives = 104/185 (56%), Gaps = 4/185 (2%)
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF---MPVKVEDTD 236
Y++ ++K GS+ P+AG+HFT +L+ R+ G + F+TLHV + ++ + +
Sbjct: 16 YRSVFSKKYGSLEIPSAGIHFTWDLIQRIKDKGGLISFITLHVASTEMLSNRKIQTKCVE 75
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWSGFTNI 295
+ ++ E + TA +N+ K GGRI +VGTT R LE+A + E + SG+T +
Sbjct: 76 EVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLESAYSREHNCLKASSGWTAL 135
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
+I PGY+ + VD L++N H PK+T ++L F G++ K Y + +F +GD L
Sbjct: 136 YIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLMKAYASEHIQSCKFDMFGDCML 195
Query: 356 LFQKR 360
+ Q
Sbjct: 196 IIQDE 200
>gi|213417400|ref|ZP_03350542.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Typhi str. E01-6750]
Length = 196
Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats.
Identities = 60/185 (32%), Positives = 104/185 (56%), Gaps = 4/185 (2%)
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTF---MPVKVEDTD 236
Y++ ++K GS+ P+AG+HFT +L+ ++ G + F+TLHV + ++ + +
Sbjct: 9 YRSVFSKKYGSLEIPSAGIHFTWDLIQKIKDKGGLISFITLHVASTEMLSNRKIQTKCVE 68
Query: 237 DHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA-TTEDGIINPWSGFTNI 295
+ ++ E + TA +N+ K GGRI +VGTT R LE+A + E + SG+T +
Sbjct: 69 EVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLESAYSREHNCLKASSGWTAL 128
Query: 296 FITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSL 355
+I PGY+ + VD L++N H PK+T ++L F G++ K Y + +F +GD L
Sbjct: 129 YIHPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLMKAYASEDIQSCQFDMFGDCML 188
Query: 356 LFQKR 360
+ Q
Sbjct: 189 IIQDE 193
>gi|284989128|ref|YP_003407682.1| Queuosine biosynthesis protein [Geodermatophilus obscurus DSM
43160]
gi|284062373|gb|ADB73311.1| Queuosine biosynthesis protein [Geodermatophilus obscurus DSM
43160]
Length = 339
Score = 208 bits (529), Expect = 2e-51, Method: Composition-based stats.
Identities = 93/353 (26%), Positives = 149/353 (42%), Gaps = 33/353 (9%)
Query: 16 ALRPVFPR----DSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQL 71
A P R D RLM V P + ++ DLP L D +V N + + A+L
Sbjct: 10 ASAPPERRGLARDGVRLMAVRPGGT-----TETTFRDLPELLEPGDLVVVNTSATLPARL 64
Query: 72 NGVRFCHINRREKEISCTLHMRVSPNSWSVYAR------PSKVIKKGDILHFFSQDGQSR 125
+ R + R +S L W V R P + ++ G +L +
Sbjct: 65 DARRADGV-RAPLHVSTAL----DDGDWVVELRRPDNDGPDRGVEPGTVLDLPGRVRLRL 119
Query: 126 LEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYA 185
LE + + + + GT +++ P+ Q YA
Sbjct: 120 LEGFPAPARASRLWRARPDPD-VAVAELLRRHGTPIRYGHLSAAVPLAEA-----QNVYA 173
Query: 186 KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIG 245
GS +AG FT +L RL++ G+ V V LH G + + + M E
Sbjct: 174 TEPGSAENASAGRPFTDRVLVRLMARGVPVVPVVLHAGVSS------PELHEPPM-PERY 226
Query: 246 FIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRA 305
+ TA+ +N+ ++ G R+V+VGTT R LETAT EDG+ +G+T++ + P RA
Sbjct: 227 RVPEVTARLVNATRAAGSRVVAVGTTVTRALETATGEDGVTRAAAGWTDLVLGPDRPARA 286
Query: 306 VDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
V L++ H P ++ L+L+ A G E + Y A + Y ++ +GDT L
Sbjct: 287 VSGLLTGLHAPDASHLLLLEAVAGRELVDEAYARAAAGGYLWHEFGDTMLFLP 339
>gi|255031026|ref|ZP_05302977.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes LO28]
Length = 149
Score = 203 bits (518), Expect = 2e-50, Method: Composition-based stats.
Identities = 74/150 (49%), Positives = 100/150 (66%), Gaps = 5/150 (3%)
Query: 149 ELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRL 208
+ +G +PLPPYI + D YQT YAK GS AAPTAGLHFT +LL ++
Sbjct: 4 FFYEVLEQLGEMPLPPYIKEQLA----DQDRYQTVYAKENGSAAAPTAGLHFTEDLLEQI 59
Query: 209 ISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSV 268
+ G+++ FVTLHVG GTF PV VEDT +H MHSE + +A+ +N +K++GG++V+V
Sbjct: 60 SAKGVEIIFVTLHVGLGTFRPVDVEDTTNHKMHSEFYRLTEESAERINKIKAQGGKVVAV 119
Query: 269 GTTSLRLLET-ATTEDGIINPWSGFTNIFI 297
GTTS+R LET A+ DG + SG+T IFI
Sbjct: 120 GTTSIRTLETIASRHDGKLVAESGWTEIFI 149
>gi|34763571|ref|ZP_00144506.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium nucleatum subsp. vincentii ATCC 49256]
gi|27886760|gb|EAA23898.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium nucleatum subsp. vincentii ATCC 49256]
Length = 143
Score = 202 bits (513), Expect = 9e-50, Method: Composition-based stats.
Identities = 63/136 (46%), Positives = 90/136 (66%)
Query: 222 VGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATT 281
VG GTF PV+ E+ +H MH E I A+ +N K+ G RI+SVGTT+ R LE++
Sbjct: 8 VGLGTFRPVQTENVLEHKMHEESFEISEKAAKIINEAKTEGRRIISVGTTATRALESSVD 67
Query: 282 EDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAI 341
++G + T+IFI PGY+F+ VD L++NFHLPKSTLLMLVSAF E+ ++Y A+
Sbjct: 68 KNGKLIVQKKDTDIFIYPGYKFKIVDALITNFHLPKSTLLMLVSAFYDREKMLEIYNLAV 127
Query: 342 SHAYRFYSYGDTSLLF 357
Y F+S+GD+ ++
Sbjct: 128 KEKYHFFSFGDSMFIY 143
>gi|218133478|ref|ZP_03462282.1| hypothetical protein BACPEC_01344 [Bacteroides pectinophilus ATCC
43243]
gi|217990853|gb|EEC56859.1| hypothetical protein BACPEC_01344 [Bacteroides pectinophilus ATCC
43243]
Length = 118
Score = 201 bits (512), Expect = 1e-49, Method: Composition-based stats.
Identities = 56/117 (47%), Positives = 79/117 (67%)
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE + A +N+ K+ GGR++ VGTTS R +E+A+ +DG + SG+T IFI P
Sbjct: 1 MHSEYYVVTQEAADKINNAKADGGRVICVGTTSCRTIESASDDDGRVKACSGWTEIFIYP 60
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ +D L++NFHLP+STLLMLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 61 GYKFKVLDALITNFHLPESTLLMLVSALAGREHILAAYKTAVEEKYRFFSFGDAMFI 117
>gi|167740108|ref|ZP_02412882.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 14]
Length = 191
Score = 198 bits (503), Expect = 1e-48, Method: Composition-based stats.
Identities = 65/206 (31%), Positives = 92/206 (44%), Gaps = 17/206 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVH-PNLSCPLVISDHLVSDLPAFLNSNDAI 59
+ + +FDFDLPP IA + R ++RL+ V N S P + D ++LPA + D +
Sbjct: 2 LTLSDFDFDLPPELIAQTALPERSASRLLEVDNTNPSAPPRLVDRRFAELPACVAPGDLL 61
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
VFN+TKV+ A+ G + +I + + R SK G L
Sbjct: 62 VFNDTKVLKARFFGRKAS-----GGKIEVLIERVTGERTALAQIRASKSPPPGTTLTLAD 116
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVD 179
+ TV ++ L + I G +PLPPYI DA D
Sbjct: 117 A-----FDVTVGERVEPFFTLHFPD----DCLVLIERHGRLPLPPYIEH--APDAADETR 165
Query: 180 YQTTYAKIQGSVAAPTAGLHFTSNLL 205
YQT +A G+VAAPTAGLHF +L
Sbjct: 166 YQTVFAANPGAVAAPTAGLHFDDAVL 191
>gi|167564026|ref|ZP_02356942.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia oklahomensis EO147]
Length = 188
Score = 198 bits (503), Expect = 2e-48, Method: Composition-based stats.
Identities = 65/203 (32%), Positives = 90/203 (44%), Gaps = 17/203 (8%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDFDLPP IA + R ++RL+ V N S P + D ++LPA + D +VF
Sbjct: 3 TLSDFDFDLPPELIAQTALPERSASRLLEVD-NTSEPPRLVDRRFAELPACVAPGDLLVF 61
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQD 121
N+TKV+ A+ G + I + + R SK G L
Sbjct: 62 NDTKVLKARFFGHKAS-----GGRIEVLIERVTGARTALAQIRASKRPAPGTTLTLADA- 115
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQ 181
+ATV ++ L + I G +PLPPYI DA D YQ
Sbjct: 116 ----FDATVGERVEPFFTLHFPE----DCLELIERYGRLPLPPYIEH--TPDATDETRYQ 165
Query: 182 TTYAKIQGSVAAPTAGLHFTSNL 204
T +A G+VAAPTAGLHF +
Sbjct: 166 TVFAANPGAVAAPTAGLHFDDAV 188
>gi|218515259|ref|ZP_03512099.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhizobium
etli 8C-3]
Length = 128
Score = 190 bits (482), Expect = 3e-46, Method: Composition-based stats.
Identities = 86/126 (68%), Positives = 100/126 (79%)
Query: 234 DTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFT 293
DTDDH MH E G++ A A LN+VK+RGGRIV VGTTSLRL+E+A EDG I W+G T
Sbjct: 1 DTDDHKMHLESGYVSAEIAARLNAVKARGGRIVCVGTTSLRLIESAAGEDGKIKHWAGAT 60
Query: 294 NIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDT 353
IFITPGYRF+AVD+LM+NFHLP+STL MLVSAF G E + Y+HAIS YRFYSYGD
Sbjct: 61 GIFITPGYRFKAVDMLMTNFHLPRSTLFMLVSAFSGFETMRAAYEHAISTGYRFYSYGDA 120
Query: 354 SLLFQK 359
SLLF+K
Sbjct: 121 SLLFRK 126
>gi|218509644|ref|ZP_03507522.1| putative S-adenosylmethionine tRNA ribosyltransferase protein
[Rhizobium etli Brasil 5]
Length = 348
Score = 189 bits (480), Expect = 6e-46, Method: Composition-based stats.
Identities = 73/351 (20%), Positives = 120/351 (34%), Gaps = 31/351 (8%)
Query: 22 PRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINR 81
R SARL+VV P+ + D ++L + D IV N+ + A L+G
Sbjct: 8 DRQSARLLVVEPD----GTMRDLPRANLGTLFDPGDLIVANDAATLPASLHGTHLQCGKT 63
Query: 82 REKEISCTLHMRVSPNSWSVYARPSK-------------VIKKGDILHFFSQDGQSRLEA 128
E ++ L +P + S + GD L LEA
Sbjct: 64 IEVRLAGWL-SPSAPVRFLAIVFGSGDHRTRTEDRLQPPALSSGDRLQL------GPLEA 116
Query: 129 TVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQ 188
V + + + G + + P I + D T A
Sbjct: 117 RVERILDHP-RFVELNFEGTR-AAMFAGLAQHGRP--IQYAHVPEPLALWDVWTRIAARP 172
Query: 189 GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFID 248
+ AP+A +++ I +T G + D + E I
Sbjct: 173 VAFEAPSASFALDWHIVQAWRRREIGFATLTHAAGISSTGD---PALDSRLPFDEPYHIP 229
Query: 249 APTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDI 308
T + + RG RI+++GT+ +R LE A DG + G I G R VD
Sbjct: 230 ECTVAQVARAQLRGSRIIAIGTSVVRALEAAANPDGSVRAGDGIATGRIACGTPLRVVDA 289
Query: 309 LMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
+++ H P + L+ AF + YR + +GD+ LL ++
Sbjct: 290 VLTGVHQPGESHFELLRAFADDSLLASASTALTACGYRAHEFGDSMLLNRQ 340
>gi|3341650|emb|CAA13168.1| z63f [Vibrio cholerae]
Length = 202
Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats.
Identities = 52/192 (27%), Positives = 88/192 (45%), Gaps = 15/192 (7%)
Query: 17 LRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRF 76
P R ++RL+ + N + D D+ + D +VFNNT+VI A++ G +
Sbjct: 26 SYPKAERTASRLLQLDGNSG---QLVDGTFKDVFELVEPGDLLVFNNTRVIPARMFGRKA 82
Query: 77 CHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNT 136
++ + + ++ + R SK K G L+ D A + + +
Sbjct: 83 S-----GGKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGEND---EFHAVMQARHDA 134
Query: 137 GEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTA 196
+ + + + ++ +G +PLPPYI RP + D YQT Y + G+VAAPTA
Sbjct: 135 --LFEIRFTAETVVLDILNQIGHMPLPPYI--DRPDEETDKERYQTVYNQKPGAVAAPTA 190
Query: 197 GLHFTSNLLSRL 208
GLHF LL ++
Sbjct: 191 GLHFDQALLEQI 202
>gi|295093022|emb|CBK82113.1| hypothetical protein [Coprococcus sp. ART55/1]
Length = 118
Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats.
Identities = 58/117 (49%), Positives = 81/117 (69%)
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITP 299
MHSE I+ A +N K+ GGR+VSVGTTS R LE+ + +DG ++ S +T+IFI P
Sbjct: 1 MHSEFCIIEQDAADMINETKAAGGRVVSVGTTSTRTLESMSDDDGTVHAGSKWTDIFIYP 60
Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
GY+F+ +D L++NFHLP+STLLMLVSA E + Y+ A+ YRF+S+GD L+
Sbjct: 61 GYKFKVIDALITNFHLPESTLLMLVSALYDREHILEAYKVAVEEKYRFFSFGDAMLI 117
>gi|149919287|ref|ZP_01907769.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Plesiocystis pacifica SIR-1]
gi|149819787|gb|EDM79211.1| putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Plesiocystis pacifica SIR-1]
Length = 304
Score = 184 bits (468), Expect = 2e-44, Method: Composition-based stats.
Identities = 71/310 (22%), Positives = 124/310 (40%), Gaps = 20/310 (6%)
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGD------- 113
N+ + A L G + E+ + V + W ++
Sbjct: 2 VNDAATLPASLPGHAWIEGRAEAIELRLLGPVGVDEDRWRAVVFGGGDWREDTDERPAPP 61
Query: 114 ILHFFSQDG-QSRLEATVIDKWNTGEILLV--FSISGIELERQISLVGTIPLPPYIARKR 170
L + L A V+++ + L+ F +G L + G I
Sbjct: 62 RLELGTNLVLAGGLGARVLERASASPRLIELAFDRAGASLYAALYSAGRP-----IQYSH 116
Query: 171 PIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPV 230
+ +QT +A + P+AG +++LL +L + G+ V +T G
Sbjct: 117 LEQPEELWSFQTVFAGRPWAAEMPSAGRALSASLLGKLRAKGVLVERLTHAAGLSATGD- 175
Query: 231 KVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTE--DGIINP 288
+ D + E I A T A+ + ++RG RI++VGTT +R LE A E DG++ P
Sbjct: 176 --PELDAQLPLPERYDIPARTVAAITAARARGARIIAVGTTVVRALEGAALEHGDGVLRP 233
Query: 289 WSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFY 348
G T + +T + R VD L++ H P + L+ AF ++ + A+ YR +
Sbjct: 234 GPGETALVVTAATQLRVVDALLTGMHAPSESHYRLLRAFLPEALLERAWDAALGAGYRSH 293
Query: 349 SYGDTSLLFQ 358
+GD +LL
Sbjct: 294 EFGDLALLVP 303
>gi|315931776|gb|EFV10731.1| queuosine biosynthesis family protein [Campylobacter jejuni subsp.
jejuni 327]
Length = 210
Score = 183 bits (465), Expect = 3e-44, Method: Composition-based stats.
Identities = 68/217 (31%), Positives = 104/217 (47%), Gaps = 22/217 (10%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+++ +D+ L IA P P++ ARL+V I +L FL N AI
Sbjct: 5 LLLSSYDYTLANELIANYPTNPKEDARLLVFDRK---NKEIFHTTFKNLQDFL-PNCAIF 60
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMR-VSPNSWSVYARPSKVIKKGDILHFFS 119
FN+TKVI A++ G + +I LH ++ ++ A+ +KK +IL+F
Sbjct: 61 FNDTKVIKARIYGNKVS-----GGKIELFLHQPFLNSHNPLFLAQIKGRVKKDEILYFKK 115
Query: 120 QDGQSRLEATVIDKWNTGEILLVFSISGIELE-----RQISLVGTIPLPPYIARKRPIDA 174
L+ V++ N G + F + L+ + +G IPLPPYI KR +
Sbjct: 116 D-----LKIRVVELLNDGLRKVQFFQNDKTLDTSNLYNLLDKIGHIPLPPYI--KREDEK 168
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISI 211
D DYQ+ +AK G+VAAPTA LHF+ +L L
Sbjct: 169 SDLKDYQSIFAKNLGAVAAPTASLHFSETMLENLRKN 205
>gi|315931775|gb|EFV10730.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Campylobacter jejuni subsp. jejuni 327]
Length = 130
Score = 183 bits (464), Expect = 5e-44, Method: Composition-based stats.
Identities = 59/138 (42%), Positives = 81/138 (58%), Gaps = 8/138 (5%)
Query: 220 LHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA 279
+HVGAGTF V+ E+ +H MHSE I + ++S ++ I+ VGTT R +E
Sbjct: 1 MHVGAGTFKSVECENIQEHKMHSEFFNIPQQACEIIDSKQA----ILGVGTTVTRTIEYY 56
Query: 280 TTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQH 339
SGF ++F+ P + L++NFHLPKSTL+MLVSAF G E+ K+Y+
Sbjct: 57 ART----KTKSGFCDLFLHPQNPPIRQNHLLTNFHLPKSTLIMLVSAFIGREQCLKLYEL 112
Query: 340 AISHAYRFYSYGDTSLLF 357
AI YRFYSYGD L+
Sbjct: 113 AIKEKYRFYSYGDAMLIL 130
>gi|86361286|ref|YP_473173.1| putative S-adenosylmethionine tRNA ribosyltransferase protein
[Rhizobium etli CFN 42]
gi|86285388|gb|ABC94446.1| putative S-adenosylmethionine tRNA ribosyltransferase protein
[Rhizobium etli CFN 42]
Length = 348
Score = 182 bits (463), Expect = 7e-44, Method: Composition-based stats.
Identities = 74/348 (21%), Positives = 116/348 (33%), Gaps = 31/348 (8%)
Query: 22 PRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINR 81
R SARL+VV + + D ++L + D +V N+ + A L+G
Sbjct: 8 DRQSARLLVVEAD----GRMRDLPRANLGMLFDPGDLVVANDAATLPASLHGTHLRCGKT 63
Query: 82 REKEISCTLHMRVSPNSWSVYARPSK-------------VIKKGDILHFFSQDGQSRLEA 128
E ++ L +P + S + GD L LEA
Sbjct: 64 IEIRLAGWLSA-SAPVRFLAIVFGSGDHRTRTEDRLPPPALSSGDRLQL------GPLEA 116
Query: 129 TVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQ 188
V + L+ S G + + P I + D T A
Sbjct: 117 RVERVLDHP-RLVELSFEGTR-AAMFAGLAQHGRP--IQYAHVPEPLALWDVWTRIAARP 172
Query: 189 GSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFID 248
+ AP+A L I +T G + D + E I
Sbjct: 173 VAFEAPSASFALDWRTLQAWRRREIGFATLTHAAGISSTGD---PALDSRLPFDEPYHIP 229
Query: 249 APTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDI 308
T + + RG RI+++GT+ +R LE A DG + G I G R VD
Sbjct: 230 ECTVAQVARAQLRGSRIIAIGTSVVRALEAAANPDGSVRAGDGIATGRIACGTPLRVVDA 289
Query: 309 LMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+++ H P + L+ AF + YR + +GD+ LL
Sbjct: 290 VLTGVHQPGESHFELLRAFADDGFLASASTALTACGYRAHEFGDSMLL 337
>gi|239978745|ref|ZP_04701269.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces albus J1074]
Length = 304
Score = 181 bits (461), Expect = 1e-43, Method: Composition-based stats.
Identities = 73/319 (22%), Positives = 126/319 (39%), Gaps = 37/319 (11%)
Query: 61 FNNTKVITAQLNGV--------RFCHINRREKEISCT-LHMRVSPNSWSVYARPSK---- 107
N + + A +G F + +R + RP
Sbjct: 2 VNTSATLPAAADGRLGGEPVVVHFSTRADGTGPGERWAVELRSPDGRGTTGPRPGGPAGA 61
Query: 108 --VIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPY 165
+ G L G SG + + G Y
Sbjct: 62 VVTLADGARLELVEPLAPGAERLWWARAGGFG----AADGSGSAVVAWLRRHGRPIRYAY 117
Query: 166 IARKRPIDARDYVDYQTTYA----KIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLH 221
R +P+ A Y+T +A GS P+AG FT+ ++ L+ G++ VTLH
Sbjct: 118 TERDQPLAA-----YRTVFAAAGEDGGGSAEMPSAGRPFTARTVTELVRAGVQFAPVTLH 172
Query: 222 VGAGTFMPVKVEDTDDH-IMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETAT 280
G V + H + E + A +N+V++ GGR+++VGTT++R LE+A
Sbjct: 173 TG--------VASVEAHEPPYPERYAVSPHAAWLVNAVRAGGGRVIAVGTTAVRALESAV 224
Query: 281 TEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHA 340
DG + SG+T + +TP R VD L++ H P+++ L+++ A G ++ Y A
Sbjct: 225 GPDGRLRAASGWTGLVVTPERGVRVVDGLLTGLHEPEASHLLMLEAVAGAAAVERGYAAA 284
Query: 341 ISHAYRFYSYGDTSLLFQK 359
+ ++ +GD LL ++
Sbjct: 285 VRARLLWHEFGDVHLLTRR 303
>gi|262197945|ref|YP_003269154.1| Queuosine biosynthesis protein [Haliangium ochraceum DSM 14365]
gi|262081292|gb|ACY17261.1| Queuosine biosynthesis protein [Haliangium ochraceum DSM 14365]
Length = 363
Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats.
Identities = 80/351 (22%), Positives = 130/351 (37%), Gaps = 25/351 (7%)
Query: 17 LRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRF 76
P P ++ RL+ + I+ H V L L D +V N+ + A L G
Sbjct: 31 RDPGRPLEATRLLSLRG-----ADIAHHRVGALVELLAPGDLLVLNDAATLPASLRG--H 83
Query: 77 CHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQ-------SRLEAT 129
E ++ L R P + + ++ AT
Sbjct: 84 VAGAEVELRLAGALGDRDFPAMFRAVLFGAGDWRQDTERRPPPPLLGPGARIELDGFSAT 143
Query: 130 VIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQG 189
V + LL + ++ V P + + QT YA
Sbjct: 144 VRARAALSPRLLTLEFDRAD-DQLAEAVYRAGRP--VQYRHLDAPLPLSAVQTPYAWRPW 200
Query: 190 SVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDA 249
+V P+ G + LL RL + GI+ F+T G D + E I A
Sbjct: 201 AVEMPSTGRPLSWALLDRLAAAGIEHAFLTHAAGLSATGD---PALDAALPLPERYAIPA 257
Query: 250 PTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDIL 309
TA+A ++RGGRIV+VGTT +R LE+A +G I+ +R RAVD +
Sbjct: 258 QTARACRVARARGGRIVAVGTTVVRALESARG-----VAGAGVATERISRRHRLRAVDGI 312
Query: 310 MSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
++ H P + L+ AF ++++ A++ Y + GD ++ R
Sbjct: 313 LTGIHAPGESHFELLEAFAAPAALRRVHAEAVAGDYLAHELGDLMMIMPAR 363
>gi|213025218|ref|ZP_03339665.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Typhi str. 404ty]
Length = 304
Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats.
Identities = 72/328 (21%), Positives = 139/328 (42%), Gaps = 48/328 (14%)
Query: 1 MMVKEFDFDLPPSR-IALRPVFP-----RDSARLMVVHPNLSCPLVISDHLVSDLPAFLN 54
M+ +++DF + I LRP + R+ +++V++ + I S + ++
Sbjct: 1 MLTEKYDFRITDQMTIPLRPHWIANDSYREKCKMLVLNRSKG---EIHKVDFSKVTDYIK 57
Query: 55 SNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
D I FN++ +I F RR + I L + N + + + D+
Sbjct: 58 EGDVICFNDSTII-----NHMFICKTRRNRLIKIVLEGFLLNNRVIISGLLKERLNANDV 112
Query: 115 LHFFSQD----------GQSRLEATVIDKWNTGEILLVFSISGIELERQIS--LVGTIPL 162
+ G+ V++ ++ + G L+ + L P
Sbjct: 113 FYLVDNPEISIKIEQRFGEESQYRAVVENHEA--LICYLASHGERLDEYVDSSLFYKYP- 169
Query: 163 PPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHV 222
Y++ ++K GS+ P+AG+HFT +L+ ++ G + F+TLHV
Sbjct: 170 ---------------DAYRSVFSKKYGSLEIPSAGIHFTWDLIQKIKDKGGLISFITLHV 214
Query: 223 GAGTF---MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETA 279
+ ++ + ++ ++ E + TA +N+ K GGRI +VGTT R LE+A
Sbjct: 215 ASTEMLSNRKIQTKCVEEVTINEEYYEVPQATADIINTAKQNGGRIFAVGTTVTRCLESA 274
Query: 280 -TTEDGIINPWSGFTNIFITPGYRFRAV 306
+ E + SG+T ++I PGY+ + V
Sbjct: 275 YSREHNCLKASSGWTALYIHPGYQLKVV 302
>gi|87304150|ref|ZP_01086686.1| queuosine biosynthesis protein [Synechococcus sp. WH 5701]
gi|87281443|gb|EAQ73511.1| queuosine biosynthesis protein [Synechococcus sp. WH 5701]
Length = 171
Score = 177 bits (450), Expect = 2e-42, Method: Composition-based stats.
Identities = 75/162 (46%), Positives = 105/162 (64%), Gaps = 4/162 (2%)
Query: 196 AGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQAL 255
AGLHF+ LL+ L G+ + +TLHVG GTF PV+ ED +HSE ++A +A+
Sbjct: 1 AGLHFSDELLAGLQRKGVGLARITLHVGLGTFRPVETEDLTQLELHSEWIEVNASVVEAI 60
Query: 256 NSVKSRGGRIVSVGTTSLRLLETATT-EDGIINPWSGFTNIFITPGYRFRAVDILMSNFH 314
+ GR+++VGTTS+R LE A + G++ P++G N+ I PGYRF V L++NFH
Sbjct: 61 QQCR---GRVIAVGTTSVRALEGAAQLQGGVLKPFTGPVNLVIQPGYRFAVVQGLLTNFH 117
Query: 315 LPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
LPKS+LL+LVSA G E+ +Y AI H YRF+SYGD +
Sbjct: 118 LPKSSLLLLVSALIGREKLLALYAEAIDHEYRFFSYGDAMWI 159
>gi|227874426|ref|ZP_03992606.1| possible S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Oribacterium sinus F0268]
gi|227839721|gb|EEJ50171.1| possible S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Oribacterium sinus F0268]
Length = 132
Score = 175 bits (445), Expect = 7e-42, Method: Composition-based stats.
Identities = 44/143 (30%), Positives = 66/143 (46%), Gaps = 11/143 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M K+F +DLP IA P+ R S+RLM+++ I D+ +L+ D +V
Sbjct: 1 MNTKDFYYDLPEELIAQDPLLNRSSSRLMLLNKETG---EIEHKHFYDILDYLHPGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N TKVI A+L GV+ ++ L R W +P K +K G + F
Sbjct: 58 LNETKVIPARLYGVK----EDTGAQVEVLLLHRKDKEHWECLVKPGKKLKPGARISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEILLVF 143
G RL+A ++D G L+ F
Sbjct: 111 -GDGRLKAEIVDILEEGNRLIRF 132
>gi|289810777|ref|ZP_06541406.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Typhi str. AG3]
Length = 272
Score = 175 bits (443), Expect = 1e-41, Method: Composition-based stats.
Identities = 66/294 (22%), Positives = 122/294 (41%), Gaps = 39/294 (13%)
Query: 36 SCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVS 95
I S + ++ D I FN++ +I F RR + I L +
Sbjct: 2 RSKGEIHKVDFSKVTDYIKEGDVICFNDSTII-----NHMFICKTRRNRLIKIVLEGFLL 56
Query: 96 PNSWSVYARPSKVIKKGDILHFFSQD----------GQSRLEATVIDKWNTGEILLVFSI 145
N + + + D+ + G+ V++ ++ +
Sbjct: 57 NNRVIISGLLKERLNANDVFYLVDNPEISIKIEQRFGEESQYRAVVENHEA--LICYLAS 114
Query: 146 SGIELERQIS--LVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSN 203
G L+ + L P Y++ ++K GS+ P+AG+HFT +
Sbjct: 115 HGERLDEYVDSSLFYKYP----------------DAYRSVFSKKYGSLEIPSAGIHFTWD 158
Query: 204 LLSRLISIGIKVYFVTLHVGAGTF---MPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKS 260
L+ ++ G + F+TLHV + ++ + ++ ++ E + TA +N+ K
Sbjct: 159 LIQKIKDKGGLISFITLHVASTEMLSNRKIQTKCVEEVTINEEYYEVPQATADIINTAKQ 218
Query: 261 RGGRIVSVGTTSLRLLETA-TTEDGIINPWSGFTNIFITPGYRFRAVDILMSNF 313
GGRI +VGTT R LE+A + E + SG+T ++I PGY+ + VD L++N
Sbjct: 219 NGGRIFAVGTTVTRCLESAYSREHNCLKASSGWTALYIHPGYQLKVVDCLLTNL 272
>gi|213580920|ref|ZP_03362746.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhi str. E98-0664]
Length = 120
Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats.
Identities = 51/110 (46%), Positives = 75/110 (68%), Gaps = 2/110 (1%)
Query: 250 PTAQALNSVKSRGGRIVSVGTTSLRLLETAT--TEDGIINPWSGFTNIFITPGYRFRAVD 307
A+ + K+RG R+++VGTTS+R LE+A + +I P+ G T IFI PGY+++ +D
Sbjct: 1 EVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKSDLIEPFFGDTQIFIYPGYQYKVID 60
Query: 308 ILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 61 ALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQKYRFFSYGDAMFIT 110
>gi|289677977|ref|ZP_06498867.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. syringae FF5]
Length = 170
Score = 170 bits (431), Expect = 3e-40, Method: Composition-based stats.
Identities = 54/189 (28%), Positives = 83/189 (43%), Gaps = 19/189 (10%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S+RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTLDGPTGA---LAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRSSKSPKPGSSILI--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
EA ++ + + L E+ + VG +PLPPYI RP + D Y
Sbjct: 110 --DGGGEAEMVARHDALFELRFAE----EVLPLLERVGHMPLPPYI--DRPDEGADRERY 161
Query: 181 QTTYAKIQG 189
QT YA+ G
Sbjct: 162 QTVYAQRAG 170
>gi|15594367|ref|NP_212155.1| S-adenosylmethionine: tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi B31]
gi|2687901|gb|AAC66411.1| S-adenosylmethionine: tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi B31]
Length = 215
Score = 168 bits (425), Expect = 2e-39, Method: Composition-based stats.
Identities = 72/232 (31%), Positives = 108/232 (46%), Gaps = 20/232 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF F+L S I P R S+RL+V+ P L + + V+++ ++NSN +
Sbjct: 4 MKTKEFHFNLSHSLIEQYPSEKRGSSRLIVLDPQLQK--IYHKNSVNNILKYINSN---I 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+K +++ N + + R+ N ++ SK G+ F
Sbjct: 59 FNNSKARKSRIYAESEMSSN-----VEFLILDRIDTNLFTALVSKSKKQIIGNFYKFPEG 113
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
L N+ E++L F+ + E +PLP YI KR D D Y
Sbjct: 114 LMDEILS------KNSSEVVLKFNNNVG--EDYFEKHCFVPLPSYI--KRDYDKIDEDRY 163
Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKV 232
QT Y+K GS A+ TAGLHF+ +L S + I+ F+TLHVGA F K+
Sbjct: 164 QTIYSKYVGSTASATAGLHFSRDLFSAFENNNIEYDFITLHVGAWDFSSCKI 215
>gi|270714907|ref|ZP_06223194.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae HK1212]
gi|270315620|gb|EFA27811.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae HK1212]
Length = 150
Score = 166 bits (422), Expect = 4e-39, Method: Composition-based stats.
Identities = 60/151 (39%), Positives = 86/151 (56%), Gaps = 4/151 (2%)
Query: 117 FFSQD--GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDA 174
F +D G++ V+ ++ + S L + +G +PLP YI RP +
Sbjct: 2 FLGEDKLGENNGIKAVMKARHSSLFEVELSDKSTALLDVLQTIGHMPLPLYI--DRPDEE 59
Query: 175 RDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVED 234
D YQT Y+K+ G+VAAPTAGLHF NLL +L + G+ FVTLHVGAGTF PV+VE+
Sbjct: 60 ADKECYQTVYSKVPGAVAAPTAGLHFDENLLEKLKAKGVNFEFVTLHVGAGTFQPVRVEN 119
Query: 235 TDDHIMHSEIGFIDAPTAQALNSVKSRGGRI 265
+DH+MH+E + A+ + K G R+
Sbjct: 120 IEDHVMHAEYVEVSQEVCNAIIATKKAGKRV 150
>gi|218512464|ref|ZP_03509304.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhizobium
etli 8C-3]
Length = 169
Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats.
Identities = 74/156 (47%), Positives = 96/156 (61%), Gaps = 4/156 (2%)
Query: 37 CPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP 96
+SDH V DLP+FL + DA+VFN+TKVI AQL G+R +++S TLHMR+ P
Sbjct: 11 AESALSDHHVYDLPSFLRAGDALVFNDTKVIPAQLEGIRHR-DGAGGQQVSATLHMRIGP 69
Query: 97 NSWSVYARPSKVIKKGDILHFFSQDGQ---SRLEATVIDKWNTGEILLVFSISGIELERQ 153
+ W +A+P K IK+GD + F L+ATV +K GE+ L F ++G L+
Sbjct: 70 SRWKAFAKPGKRIKEGDRIAFGHSGESCFLGALDATVEEKGEAGEVTLAFDLTGPALDEA 129
Query: 154 ISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQG 189
I+ VG IPLPPYIA KRP D RD DYQT YA G
Sbjct: 130 IAAVGHIPLPPYIAAKRPEDERDRADYQTIYAPRGG 165
>gi|153853723|ref|ZP_01995079.1| hypothetical protein DORLON_01070 [Dorea longicatena DSM 13814]
gi|149753473|gb|EDM63404.1| hypothetical protein DORLON_01070 [Dorea longicatena DSM 13814]
Length = 138
Score = 165 bits (417), Expect = 1e-38, Method: Composition-based stats.
Identities = 41/139 (29%), Positives = 61/139 (43%), Gaps = 11/139 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M ++F ++LP IA P+ R S+RL+V+ S H+ ++ +L+ D +V
Sbjct: 1 MKRQDFYYELPEELIAQDPLEDRSSSRLLVLDKETGA---FSHHVFKEITEYLHEGDCLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
N+TKVI A+L G + +I L R N W +P K K G + F
Sbjct: 58 INDTKVIPARLIGSKV----ETNAKIEVLLLKRKENNVWETLVKPGKKAKVGAKISF--- 110
Query: 121 DGQSRLEATVIDKWNTGEI 139
G L VID G
Sbjct: 111 -GDGLLMGEVIDVVEEGNR 128
>gi|258615070|ref|ZP_05712840.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Enterococcus faecium DO]
Length = 133
Score = 159 bits (403), Expect = 5e-37, Method: Composition-based stats.
Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 11/141 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
+ ++FDFDLP IA P+ RD +RL+V+ + D ++ L DA+V
Sbjct: 2 LTTEDFDFDLPEELIAQTPLKDRDHSRLLVLDRKTG---EMEDKHFHEIIEELQPGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
NNT+V+ A+L G + + L ++W +P+K K G + F
Sbjct: 59 MNNTRVLPARLYGEK----PDTGAHLEVLLLTNTQGDTWETLIKPAKRAKVGTRISF--- 111
Query: 121 DGQSRLEATVIDKWNTGEILL 141
G RL+A V ++ G ++
Sbjct: 112 -GDGRLQAVVKEELEHGGRII 131
>gi|330937010|gb|EGH41103.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. pisi str. 1704B]
Length = 111
Score = 159 bits (402), Expect = 7e-37, Method: Composition-based stats.
Identities = 55/96 (57%), Positives = 69/96 (71%), Gaps = 1/96 (1%)
Query: 263 GRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLM 322
GR+++VGTTS+R LE+A DG + P+SG T+IFI PG F VD L++NFHLP+STLLM
Sbjct: 1 GRVIAVGTTSVRSLESAAR-DGELKPFSGDTDIFIYPGRPFHVVDALVTNFHLPESTLLM 59
Query: 323 LVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
LVSAF G ET Y AI H YRF+SYGD + +
Sbjct: 60 LVSAFAGYPETMAAYAAAIEHGYRFFSYGDAMFITR 95
>gi|145631081|ref|ZP_01786856.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae R3021]
gi|144983366|gb|EDJ90848.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae R3021]
Length = 120
Score = 159 bits (402), Expect = 8e-37, Method: Composition-based stats.
Identities = 51/111 (45%), Positives = 71/111 (63%), Gaps = 6/111 (5%)
Query: 254 ALNSVKSRGGRIVSVGTTSLRLLETATTEDGI------INPWSGFTNIFITPGYRFRAVD 307
L+ K G R+++VGTTS+R +E+A I P+ T+IFI PG +FR VD
Sbjct: 2 RLSQQKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSDTSIFIYPGKKFRVVD 61
Query: 308 ILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
L++NFHLP+STL+MLVSAF G + T Y+HA+ YRF+SYGD + +
Sbjct: 62 CLITNFHLPESTLIMLVSAFAGYKNTMNAYKHAVQEKYRFFSYGDAMFINK 112
>gi|213583663|ref|ZP_03365489.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhi str. E98-0664]
Length = 150
Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats.
Identities = 43/163 (26%), Positives = 68/163 (41%), Gaps = 13/163 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLLSLEGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + +I + + + R SK K G L
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKIEVLVERMLDDKRILAHIRASKAPKPGTELLLGDD 112
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLP 163
+ + AT+ + G + V + ++ +G +PLP
Sbjct: 113 E---SIHATMTARH--GALFEVEFNDPRPVLDILNAIGHMPLP 150
>gi|218459304|ref|ZP_03499395.1| putative S-adenosylmethionine tRNA ribosyltransferase protein
[Rhizobium etli Kim 5]
Length = 251
Score = 153 bits (388), Expect = 3e-35, Method: Composition-based stats.
Identities = 55/248 (22%), Positives = 84/248 (33%), Gaps = 13/248 (5%)
Query: 112 GDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRP 171
GD L LEA V + L+ S G + + P I
Sbjct: 9 GDRLQL------GPLEARVERVLDHP-RLVELSFEGTR-AAMFAGLAQHGRP--IQYAHV 58
Query: 172 IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK 231
+ D T A + AP+A L I +T G +
Sbjct: 59 PEPLALWDVWTRIAARPVAFEAPSASFTLDWRTLQAWRRREIGFATLTHAAGISSTGD-- 116
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSG 291
D + E I T + + RG RI+++GT+ +R LE A DG + G
Sbjct: 117 -PALDSRLPFDEPYHIPECTVAQVARAQLRGSRIIAIGTSVVRALEAAANPDGSVRAGDG 175
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
I G R VD +++ H P + L+ AF + YR + +G
Sbjct: 176 IATGRIACGTPLRVVDAVLTGVHQPGGSHFELLRAFADNGLLDSASTALTACGYRAHEFG 235
Query: 352 DTSLLFQK 359
D+ LL ++
Sbjct: 236 DSMLLNRQ 243
>gi|218510812|ref|ZP_03508690.1| putative S-adenosylmethionine tRNA ribosyltransferase protein
[Rhizobium etli Brasil 5]
Length = 251
Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats.
Identities = 55/248 (22%), Positives = 85/248 (34%), Gaps = 13/248 (5%)
Query: 112 GDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRP 171
GD L LEA V + L+ S G + + P I
Sbjct: 9 GDRLRL------GPLEARVERVLDHP-RLVELSFEGTR-AAMFAGLAQHGRP--IQYAHV 58
Query: 172 IDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVK 231
+ D T A + AP+A L I +T G +
Sbjct: 59 PEPLALWDVWTRIAARPVAFEAPSASFALDWRTLQAWRRREIGFATLTHAAGISSTGD-- 116
Query: 232 VEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLETATTEDGIINPWSG 291
D + E I T + + RG RI+++GT+ +R LE A DG + G
Sbjct: 117 -PALDSRLPFDEPYHIPECTVAQVARAQLRGSRIIAIGTSVVRALEAAANPDGSVRAGDG 175
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
I G R VD +++ H P + L+ AF ++ YR + +G
Sbjct: 176 IATGRIACGTPLRVVDAVLTGVHQPGESHFELLRAFADDGFLASASTALTAYGYRAHEFG 235
Query: 352 DTSLLFQK 359
D+ LL ++
Sbjct: 236 DSMLLNRQ 243
>gi|218672577|ref|ZP_03522246.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhizobium
etli GR56]
Length = 134
Score = 151 bits (383), Expect = 1e-34, Method: Composition-based stats.
Identities = 69/137 (50%), Positives = 87/137 (63%), Gaps = 6/137 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V FDFDLP RIALRP PRDSARL+VV PN +SDH V DLP+FL + DA+V
Sbjct: 1 MRVDLFDFDLPDERIALRPAEPRDSARLLVVDPN--AESALSDHHVCDLPSFLRAGDALV 58
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FN+TKVI AQL G+R +++S TLHMR+ P+ W +A+P K IK+GD + F
Sbjct: 59 FNDTKVIPAQLEGIRHR-DGAGGQQMSATLHMRIGPSRWKAFAKPGKRIKEGDRIAFGHS 117
Query: 121 DGQ---SRLEATVIDKW 134
L+ATV +K
Sbjct: 118 GESCMIGSLDATVEEKG 134
>gi|239993599|ref|ZP_04714123.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Alteromonas
macleodii ATCC 27126]
Length = 127
Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 63/140 (45%), Gaps = 13/140 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +F F+LP IA P R ++RL+ + ++ + +D+ F+ D +V
Sbjct: 1 MKLSDFSFELPEKLIAKYPTQQRTASRLLHLDGKTGN---VAHTMFADMLKFVEPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + S N+ + R SK K G L
Sbjct: 58 FNNTRVIPARLLGKKE-----TGGQVEVLIERITSDNTALAHVRASKAPKPGTTLIL--- 109
Query: 121 DGQSRLEATVIDKWNTGEIL 140
+ ++ TV + + IL
Sbjct: 110 --EEKVNVTVTGRDDALFIL 127
>gi|270593971|ref|ZP_06221487.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae HK1212]
gi|270318375|gb|EFA29518.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Haemophilus
influenzae HK1212]
Length = 113
Score = 146 bits (370), Expect = 4e-33, Method: Composition-based stats.
Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 8/121 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F+FDLP IA P R S RL+ ++ I SD+ ++ D ++
Sbjct: 1 MRVSDFNFDLPDELIARYPKTDRVSCRLLQLNGENG---EIFHRTFSDVLDLIDEGDLLI 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A++ G + +I + + + + + R SK K+G L
Sbjct: 58 FNNTRVIPARMFGRKAS-----GGKIEVLVERMLDEHRFLAHIRSSKSPKEGAELFLGED 112
Query: 121 D 121
Sbjct: 113 K 113
>gi|225164099|ref|ZP_03726381.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Opitutaceae bacterium TAV2]
gi|224801305|gb|EEG19619.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Opitutaceae bacterium TAV2]
Length = 162
Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats.
Identities = 63/158 (39%), Positives = 87/158 (55%), Gaps = 13/158 (8%)
Query: 130 VIDKWNTGEILLV--FSISGIELERQISLVGTIPLPPYIARKRPID------ARDYVDYQ 181
V++K G L+ G + + +G +PLPPYIAR + ARD YQ
Sbjct: 2 VLEKDGEGAALVRFTMPGGGGSITEIANRLGDVPLPPYIARGGDAEGRAEERARDIERYQ 61
Query: 182 TTYAKI--QGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHI 239
T YA Q +VAAPTAGLHFT LL++L G+ +TLHVG GTF P+ ++H
Sbjct: 62 TVYADRTRQVAVAAPTAGLHFTPELLAQLAGQGVGTADITLHVGLGTFKPIATATIEEHP 121
Query: 240 MHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLE 277
+H EI I T +AL + GR ++VGTT++R +E
Sbjct: 122 IHREIYEIPPATQRAL---LAPAGRRIAVGTTTVRTVE 156
>gi|167837802|ref|ZP_02464685.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia thailandensis MSMB43]
Length = 123
Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats.
Identities = 58/109 (53%), Positives = 77/109 (70%), Gaps = 4/109 (3%)
Query: 255 LNSVKSRGGRIVSVGTTSLRLLETATTE----DGIINPWSGFTNIFITPGYRFRAVDILM 310
++ ++RGGR+++VGTTS+R LE A + + T+IFITPGYRFR VD L+
Sbjct: 5 VSQTRARGGRVIAVGTTSMRALEAAARDADAAGRPLAATRADTSIFITPGYRFRVVDRLV 64
Query: 311 SNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQK 359
+NFHLPKSTLLMLVSAF G+E + Y+HAI YRF+SYGD LL ++
Sbjct: 65 TNFHLPKSTLLMLVSAFAGVETIRAAYRHAIDARYRFFSYGDAMLLTRR 113
>gi|222870497|gb|EEF07628.1| predicted protein [Populus trichocarpa]
Length = 308
Score = 140 bits (354), Expect = 3e-31, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 59/132 (44%), Gaps = 8/132 (6%)
Query: 5 EFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNT 64
+FDF+LP + IA P R ++RL+ + + P +D + +LP L D +VFN+T
Sbjct: 101 DFDFELPENLIAQHPAAQRSASRLLDGRDDATPP---TDRIFHELPDLLQPGDLLVFNDT 157
Query: 65 KVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQS 124
+V+ A++ G + + + + N + R SK G +H +
Sbjct: 158 RVLKARIFGEKAS-----GGRLELLVERVLEGNDVVAHMRVSKKPLPGSRIHLCGGKNRG 212
Query: 125 RLEATVIDKWNT 136
+A + +W
Sbjct: 213 GFDAVLRGRWPD 224
>gi|255027598|ref|ZP_05299584.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes FSL J2-003]
Length = 97
Score = 140 bits (353), Expect = 4e-31, Method: Composition-based stats.
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 7/104 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V++FDFDLP IA P+ R S+RLMV+ I D +D+ ++LN DA+V
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKESGD---IKDQHFTDIISYLNEGDALV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYAR 104
N+T+V+ A+L+G++ + I L + N+W +
Sbjct: 58 LNDTRVLPARLHGIK----DETGAHIEVLLLKQKEGNAWETLVK 97
>gi|213417524|ref|ZP_03350666.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
Length = 83
Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats.
Identities = 37/73 (50%), Positives = 52/73 (71%)
Query: 285 IINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHA 344
+I P+ G T IFI PGY+++ +D L++NFHLP+STL+MLVSAF G + T Y+ A+
Sbjct: 1 MIEPFFGDTQIFIYPGYQYKVIDALITNFHLPESTLIMLVSAFAGYQHTMNAYKTAVEQK 60
Query: 345 YRFYSYGDTSLLF 357
YRF+SYGD +
Sbjct: 61 YRFFSYGDAMFIT 73
>gi|89100781|ref|ZP_01173634.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
sp. NRRL B-14911]
gi|89084484|gb|EAR63632.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
sp. NRRL B-14911]
Length = 74
Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats.
Identities = 37/74 (50%), Positives = 51/74 (68%)
Query: 284 GIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISH 343
G + SG+T+IFI PGY F+A+D +++NFHLPKSTL+ML+SA G E Y A+
Sbjct: 1 GRLEAGSGWTSIFIYPGYEFKAIDGMITNFHLPKSTLIMLISALAGRENVLNAYNEAVKE 60
Query: 344 AYRFYSYGDTSLLF 357
YRF+S+GD L+
Sbjct: 61 RYRFFSFGDAMLII 74
>gi|153877504|ref|ZP_02004263.1| S-adenosylmethionine [Beggiatoa sp. PS]
gi|152066032|gb|EDN65737.1| S-adenosylmethionine [Beggiatoa sp. PS]
Length = 95
Score = 134 bits (339), Expect = 2e-29, Method: Composition-based stats.
Identities = 46/84 (54%), Positives = 61/84 (72%), Gaps = 1/84 (1%)
Query: 273 LRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEE 332
+R LETA+T G+I P+ G T +FITPGY F+ VD L++NFHLP+STLLMLV AF G +
Sbjct: 1 MRALETASTS-GVIKPYEGETRLFITPGYHFQTVDALLTNFHLPESTLLMLVCAFAGQAQ 59
Query: 333 TKKMYQHAISHAYRFYSYGDTSLL 356
Y+HA++ YRF+SYGD +
Sbjct: 60 VLDAYRHAVAQHYRFFSYGDAMFV 83
>gi|325129853|gb|EGC52659.1| Queuosine biosynthesis family protein [Neisseria meningitidis
OX99.30304]
Length = 133
Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats.
Identities = 50/140 (35%), Positives = 67/140 (47%), Gaps = 9/140 (6%)
Query: 82 REKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILL 141
I + + ++ + R SK K G L F + + A ++ + GE+
Sbjct: 3 SGGRIEALIERVLDNHTALAHIRSSKSPKPGMGLVF-----EGGIRAVMVGR--EGELFC 55
Query: 142 VFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFT 201
+ G + + G +PLPPYI +R DA D YQT YAK QG+VAAPTAGLHFT
Sbjct: 56 LRFEGGQTVYELLEQNGHLPLPPYI--ERAADADDDSRYQTVYAKYQGAVAAPTAGLHFT 113
Query: 202 SNLLSRLISIGIKVYFVTLH 221
LL RL VTLH
Sbjct: 114 EELLRRLKDKRAVTAEVTLH 133
>gi|213585165|ref|ZP_03366991.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhi str. E98-0664]
Length = 86
Score = 133 bits (334), Expect = 6e-29, Method: Composition-based stats.
Identities = 50/87 (57%), Positives = 62/87 (71%), Gaps = 2/87 (2%)
Query: 158 GTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYF 217
G +PLPPYI RP + D YQT Y++ G+VAAPTAGLHF LL+ L G+++ F
Sbjct: 1 GHMPLPPYI--DRPDENADRELYQTVYSEKPGAVAAPTAGLHFDEPLLAALREKGVEMAF 58
Query: 218 VTLHVGAGTFMPVKVEDTDDHIMHSEI 244
VTLHVGAGTF PV+V+ +DHIMHSE
Sbjct: 59 VTLHVGAGTFQPVRVDTIEDHIMHSEY 85
>gi|284098483|ref|ZP_06385888.1| S-adenosylmethionine tRNA-ribosyltransferase-isomerase [Candidatus
Poribacteria sp. WGA-A3]
gi|283830538|gb|EFC34711.1| S-adenosylmethionine tRNA-ribosyltransferase-isomerase [Candidatus
Poribacteria sp. WGA-A3]
Length = 85
Score = 129 bits (326), Expect = 5e-28, Method: Composition-based stats.
Identities = 47/84 (55%), Positives = 61/84 (72%)
Query: 273 LRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEE 332
+R LE+A E G I P G T +FITPG+RF VD L++NFHLP++TLLMLVSAF G+++
Sbjct: 1 MRTLESAIDEAGKIRPGPGETRLFITPGFRFTMVDALLTNFHLPRTTLLMLVSAFGGLDQ 60
Query: 333 TKKMYQHAISHAYRFYSYGDTSLL 356
+ Y AI+ YRFYSYGD L+
Sbjct: 61 LRAAYAEAITARYRFYSYGDAMLI 84
>gi|47094202|ref|ZP_00231917.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
H7858]
gi|47017429|gb|EAL08247.1| conserved hypothetical protein [Listeria monocytogenes str. 4b
H7858]
Length = 91
Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 43/85 (50%), Positives = 55/85 (64%)
Query: 272 SLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIE 331
S L A+ DG + SG+T IFI+PGY FRAVD L++NFHLPKSTL+MLVSA
Sbjct: 6 SEHLETIASRHDGKLVAESGWTEIFISPGYTFRAVDALITNFHLPKSTLIMLVSALSDRT 65
Query: 332 ETKKMYQHAISHAYRFYSYGDTSLL 356
+ Y HA+ YRF+S+GD +
Sbjct: 66 KILAAYNHAVEEQYRFFSFGDAMFI 90
>gi|167469944|ref|ZP_02334648.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Yersinia
pestis FV-1]
Length = 98
Score = 126 bits (317), Expect = 5e-27, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 8/106 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP + IA P R RL+ + ++ + +DL L D +V
Sbjct: 1 MRVADFSFELPEALIAHYPQPQRSGCRLLSLDGPTGT---LTHGIFTDLLDKLAPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPS 106
FNNT+VI A+L G + ++ + + + + + S
Sbjct: 58 FNNTRVIPARLFGRKAS-----GGKLEVLVERVLDDHRVLAHVKAS 98
>gi|257487221|ref|ZP_05641262.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. tabaci ATCC 11528]
Length = 142
Score = 124 bits (311), Expect = 3e-26, Method: Composition-based stats.
Identities = 39/159 (24%), Positives = 65/159 (40%), Gaps = 17/159 (10%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S+RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTLDGPTGA---LAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVRSSKSPKPGSSILI--- 109
Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGT 159
EA ++ + + L E+ + VG
Sbjct: 110 --DGGGEAEMVARHDALFELRFAE----EVLPLLERVGH 142
>gi|30231093|gb|AAP23111.1|AF461554_3 QueA [Pseudomonas syringae pv. angulata]
gi|30231119|gb|AAP23131.1|AF461560_3 QueA [Pseudomonas syringae pv. tabaci]
Length = 136
Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 8/104 (7%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S+RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTLDGPTGA---LAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYAR 104
FNNT+VI A+L G + ++ + + + + R
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVLDSHRVLAHVR 96
>gi|167847216|ref|ZP_02472724.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei B7210]
Length = 92
Score = 123 bits (309), Expect = 4e-26, Method: Composition-based stats.
Identities = 47/81 (58%), Positives = 56/81 (69%)
Query: 279 ATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQ 338
A + T+IFITPGYRFR VD L++NFHLPKSTLLMLVSAF GIE + Y+
Sbjct: 1 AQAAGRPLAATRAETDIFITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGIETIRAAYR 60
Query: 339 HAISHAYRFYSYGDTSLLFQK 359
HAI YRF+SYGD LL ++
Sbjct: 61 HAIDARYRFFSYGDAMLLTRR 81
>gi|167564027|ref|ZP_02356943.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia oklahomensis EO147]
Length = 94
Score = 123 bits (308), Expect = 6e-26, Method: Composition-based stats.
Identities = 44/74 (59%), Positives = 57/74 (77%)
Query: 286 INPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAY 345
++ T+IFITPGYRFR VD L++NFHLPKSTLLMLVSAF G++ + Y+HAI+ Y
Sbjct: 17 LSATRAETDIFITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGVDTIRAAYRHAIAARY 76
Query: 346 RFYSYGDTSLLFQK 359
RF+SYGD LL ++
Sbjct: 77 RFFSYGDAMLLTRR 90
>gi|167904190|ref|ZP_02491395.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei NCTC 13177]
Length = 97
Score = 121 bits (305), Expect = 1e-25, Method: Composition-based stats.
Identities = 46/74 (62%), Positives = 55/74 (74%)
Query: 286 INPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAY 345
+ T+IFITPGYRFR VD L++NFHLPKSTLLMLVSAF GIE + Y+HAI Y
Sbjct: 13 LAATRAETDIFITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGIETIRAAYRHAIDARY 72
Query: 346 RFYSYGDTSLLFQK 359
RF+SYGD LL ++
Sbjct: 73 RFFSYGDAMLLTRR 86
>gi|167825728|ref|ZP_02457199.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 9]
Length = 88
Score = 121 bits (305), Expect = 1e-25, Method: Composition-based stats.
Identities = 46/74 (62%), Positives = 55/74 (74%)
Query: 286 INPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAY 345
+ T+IFITPGYRFR VD L++NFHLPKSTLLMLVSAF GIE + Y+HAI Y
Sbjct: 4 LAATRAETDIFITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGIETIRAAYRHAIDARY 63
Query: 346 RFYSYGDTSLLFQK 359
RF+SYGD LL ++
Sbjct: 64 RFFSYGDAMLLTRR 77
>gi|30231107|gb|AAP23122.1|AF461557_3 QueA [Pseudomonas syringae pv. glycinea]
Length = 136
Score = 121 bits (305), Expect = 1e-25, Method: Composition-based stats.
Identities = 36/135 (26%), Positives = 59/135 (43%), Gaps = 9/135 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA RP+ R S+RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFELPDSLIARRPLVERRSSRLLTLDGPTGA---LAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNNT+VI A+L G + ++ + + + R SK K G +
Sbjct: 58 FNNTRVIPARLFGQKAS-----GGKLEILVERVQDSHRVLAHVRSSKSPKPGSSI-LIDG 111
Query: 121 DGQSRLEATVIDKWN 135
G++ + A +
Sbjct: 112 GGEAEMVARHDALFE 126
>gi|167920404|ref|ZP_02507495.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei BCC215]
Length = 89
Score = 121 bits (305), Expect = 1e-25, Method: Composition-based stats.
Identities = 46/74 (62%), Positives = 55/74 (74%)
Query: 286 INPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAY 345
+ T+IFITPGYRFR VD L++NFHLPKSTLLMLVSAF GIE + Y+HAI Y
Sbjct: 5 LAATRAETDIFITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGIETIRAAYRHAIDARY 64
Query: 346 RFYSYGDTSLLFQK 359
RF+SYGD LL ++
Sbjct: 65 RFFSYGDAMLLTRR 78
>gi|167912449|ref|ZP_02499540.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 112]
Length = 87
Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats.
Identities = 46/74 (62%), Positives = 55/74 (74%)
Query: 286 INPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAY 345
+ T+IFITPGYRFR VD L++NFHLPKSTLLMLVSAF GIE + Y+HAI Y
Sbjct: 3 LAATRAETDIFITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGIETIRAAYRHAIDARY 62
Query: 346 RFYSYGDTSLLFQK 359
RF+SYGD LL ++
Sbjct: 63 RFFSYGDAMLLTRR 76
>gi|325518191|gb|EGC97961.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia sp. TJI49]
Length = 122
Score = 121 bits (303), Expect = 2e-25, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 6/108 (5%)
Query: 2 MVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
+ +FDF+LPP IA + R ++RL+ V + P + D +DLPA + D +VF
Sbjct: 20 TLSDFDFNLPPELIAQTALPDRTASRLLEVDG-AAEPARLVDRRFADLPACIAPGDLLVF 78
Query: 62 NNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVI 109
N+TKV+ A+ G + I + ++ R SK
Sbjct: 79 NDTKVLKARFFGQKAS-----GGRIEVLVERVTGTHTALAQIRASKSP 121
>gi|167895802|ref|ZP_02483204.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia pseudomallei 7894]
Length = 79
Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats.
Identities = 46/68 (67%), Positives = 54/68 (79%)
Query: 292 FTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYG 351
T+IFITPGYRFR VD L++NFHLPKSTLLMLVSAF GIE + Y+HAI YRF+SYG
Sbjct: 1 ETDIFITPGYRFRVVDRLVTNFHLPKSTLLMLVSAFAGIETIRAAYRHAIDARYRFFSYG 60
Query: 352 DTSLLFQK 359
D LL ++
Sbjct: 61 DAMLLTRR 68
>gi|330902171|gb|EGH33416.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Pseudomonas syringae pv. japonica str. M301072PT]
Length = 90
Score = 118 bits (297), Expect = 1e-24, Method: Composition-based stats.
Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S+RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTLDGPTGA---LAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNS 98
FNNT+V+ A+L G + ++ + + +
Sbjct: 58 FNNTRVLPARLFGQKAS-----GGKLEILVERVLDSHR 90
>gi|310814917|ref|YP_003962881.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Ketogulonicigenium vulgare Y25]
gi|308753652|gb|ADO41581.1| S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
[Ketogulonicigenium vulgare Y25]
Length = 106
Score = 116 bits (292), Expect = 4e-24, Method: Composition-based stats.
Identities = 40/105 (38%), Positives = 56/105 (53%), Gaps = 7/105 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + +FDF LP IALRP PR +A+L+V + ISD V++L A N D +V
Sbjct: 1 MKLSDFDFTLPEDLIALRPAVPRTAAKLLVARGDT-----ISDLTVAELAAQFNPGDRLV 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARP 105
N+TKVI A+L+G+R H I TL + +W + P
Sbjct: 56 LNDTKVIPARLSGLR--HRGEATARIEVTLLQPTADGAWMALSPP 98
>gi|257439750|ref|ZP_05615505.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Faecalibacterium prausnitzii A2-165]
gi|257197770|gb|EEU96054.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Faecalibacterium prausnitzii A2-165]
Length = 121
Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 4 KEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNN 63
K+F +DLP IA P PRDSARLMV+ I + DLP +L D +V NN
Sbjct: 14 KDFWYDLPKELIAQEPADPRDSARLMVL---SQKDDSIQHRIFRDLPEYLEPGDLLVVNN 70
Query: 64 TKVITAQLNGVRFC 77
+KV+ A+ G +
Sbjct: 71 SKVLPARHRGCQAA 84
>gi|213618788|ref|ZP_03372614.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Typhi str.
E98-2068]
gi|289812266|ref|ZP_06542895.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Typhi str.
AG3]
Length = 76
Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLLSLEGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQLNGVRFCHI 79
FNNT+VI A+L G +
Sbjct: 58 FNNTRVIPARLFGRKASGG 76
>gi|32419294|gb|AAN85165.1| QueA [Pseudomonas syringae pv. syringae]
Length = 70
Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P+ R S+RL+ + ++ +DL L D +V
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTLDGPTGA---LAHRQFTDLLEHLRPGDLMV 57
Query: 61 FNNTKVITAQLNG 73
FNNT+VI A+L G
Sbjct: 58 FNNTRVIPARLFG 70
>gi|293418472|ref|ZP_06660907.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli B088]
gi|291325000|gb|EFE64415.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Escherichia
coli B088]
Length = 65
Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats.
Identities = 28/53 (52%), Positives = 37/53 (69%)
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
VD L++NFHLP+STL+MLVSAF G + T Y+ A+ YRF+SYGD +
Sbjct: 1 MVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFIT 53
>gi|254387071|ref|ZP_05002347.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces sp. Mg1]
gi|194345892|gb|EDX26858.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Streptomyces sp. Mg1]
Length = 157
Score = 106 bits (265), Expect = 6e-21, Method: Composition-based stats.
Identities = 34/96 (35%), Positives = 58/96 (60%)
Query: 265 IVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLV 324
+++VGTT++R LE+AT DG++ G+T++ +TPG RAVD L++ H P ++ LM++
Sbjct: 59 VIAVGTTAVRALESATGPDGVVRTAGGWTDLVVTPGRGVRAVDGLLTGLHEPGASHLMML 118
Query: 325 SAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
A G E ++ Y A + ++ GD LL +
Sbjct: 119 EAVAGAEAVRRGYAAARAGLCLWHECGDVHLLLKDE 154
>gi|213028912|ref|ZP_03343359.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Salmonella enterica subsp. enterica serovar Typhi str.
404ty]
Length = 67
Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M V +F F+LP S IA P R RL+ + ++ +DL LN D +V
Sbjct: 1 MRVTDFSFELPESLIAHYPQPERSRCRLLSLEGPTGA---LTHGTFTDLLDKLNPGDLLV 57
Query: 61 FNNTKVITAQ 70
FNNT+VI A+
Sbjct: 58 FNNTRVIPAR 67
>gi|205374302|ref|ZP_03227101.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
coahuilensis m4-4]
Length = 57
Score = 104 bits (259), Expect = 3e-20, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 35/51 (68%)
Query: 306 VDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+D +++NFHLPKSTL+MLVSA G E Y+ A+ YRF+S+GD +
Sbjct: 6 IDAMITNFHLPKSTLIMLVSALAGKEHVLHAYETAVKEKYRFFSFGDAMFI 56
>gi|325518193|gb|EGC97962.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Burkholderia sp. TJI49]
Length = 86
Score = 103 bits (256), Expect = 7e-20, Method: Composition-based stats.
Identities = 30/72 (41%), Positives = 50/72 (69%)
Query: 202 SNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSR 261
LL++L ++G++ +TLHVGAGTF PV+VE+ +H MHSE + + + ++R
Sbjct: 2 EPLLAKLDAMGVERATLTLHVGAGTFQPVRVENIAEHKMHSEWYELPQSLVDKIAATRAR 61
Query: 262 GGRIVSVGTTSL 273
GG++++VGTTS+
Sbjct: 62 GGKVIAVGTTSM 73
>gi|225552299|ref|ZP_03773239.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
sp. SV1]
gi|225371297|gb|EEH00727.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
sp. SV1]
Length = 53
Score = 98.0 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 35/51 (68%)
Query: 308 ILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+L +NFH P+STLLMLVS+F G + Y+ AI+ Y+F+SYGD L+
Sbjct: 1 MLFTNFHTPQSTLLMLVSSFAGKDFVFSSYEEAINKGYKFFSYGDAMLILN 51
>gi|114778173|ref|ZP_01453060.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Mariprofundus ferrooxydans PV-1]
gi|114551591|gb|EAU54145.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Mariprofundus ferrooxydans PV-1]
Length = 65
Score = 97.6 bits (242), Expect = 3e-18, Method: Composition-based stats.
Identities = 30/52 (57%), Positives = 34/52 (65%)
Query: 305 AVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
VD L++NFHLPKSTL+MLVSA G E Y HA YRFYSYGD +
Sbjct: 1 MVDALLTNFHLPKSTLIMLVSALAGRERVLAAYTHAREEGYRFYSYGDAMFV 52
>gi|1620918|emb|CAA70098.1| S-adenosylmethionine: tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi]
Length = 108
Score = 96.8 bits (240), Expect = 5e-18, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 10/117 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF F+LP S I P R S+RL+V+ P L + ++ V+++ ++NSN +
Sbjct: 1 MKTKEFHFNLPHSLIEQYPSEKRGSSRLIVLDPQLQK--IYHENSVNNILKYINSN---I 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHF 117
FNN+KV +++ N + + R+ N ++ SK G+ F
Sbjct: 56 FNNSKVRKSRIYVESEMSSN-----VEFLILDRIGTNLFTALVSKSKKQIIGNFYKF 107
>gi|225166247|ref|ZP_03727949.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Opitutaceae bacterium TAV2]
gi|224799506|gb|EEG18033.1| S-adenosylmethionine--tRNA-ribosyltransferase-isomerase
[Opitutaceae bacterium TAV2]
Length = 86
Score = 96.5 bits (239), Expect = 6e-18, Method: Composition-based stats.
Identities = 33/76 (43%), Positives = 45/76 (59%), Gaps = 6/76 (7%)
Query: 288 PWSGFTNIFITPGYRFRAVDILMSNFHLPKSTLLMLVSAFC------GIEETKKMYQHAI 341
+ I+I P FR VD L++NFH P+STL+ LVSAF GI +++Y AI
Sbjct: 11 AYIAEAGIYIYPPRTFRGVDALVTNFHQPRSTLMCLVSAFLTPGSTDGIAWLRELYAEAI 70
Query: 342 SHAYRFYSYGDTSLLF 357
+ YRF+SYGD L+
Sbjct: 71 AREYRFFSYGDAMLIL 86
>gi|219685389|ref|ZP_03540208.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
garinii Far04]
gi|219673162|gb|EED30182.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
garinii Far04]
Length = 53
Score = 96.1 bits (238), Expect = 8e-18, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 35/51 (68%)
Query: 308 ILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQ 358
+L +NFH P+STLLMLVS+F G + Y+ AI+ Y+F+SYGD L+
Sbjct: 1 MLFTNFHTPQSTLLMLVSSFAGKDFVFSSYEEAINKGYKFFSYGDAMLVLN 51
>gi|218671499|ref|ZP_03521169.1| queuine tRNA-ribosyltransferase [Rhizobium etli GR56]
Length = 444
Score = 94.9 bits (235), Expect = 2e-17, Method: Composition-based stats.
Identities = 39/68 (57%), Positives = 43/68 (63%), Gaps = 5/68 (7%)
Query: 295 IFITPG--YRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGD 352
IFITP R D F LP+STL MLVSAF G E Y+HAIS YRFYSYGD
Sbjct: 2 IFITPATVQGGRHAD---DQFPLPRSTLFMLVSAFSGFETMHAAYEHAISTGYRFYSYGD 58
Query: 353 TSLLFQKR 360
SLLF++R
Sbjct: 59 ASLLFRER 66
>gi|225549199|ref|ZP_03770172.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi 94a]
gi|225370057|gb|EEG99497.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi 94a]
Length = 111
Score = 89.9 bits (222), Expect = 5e-16, Method: Composition-based stats.
Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF F+L S I P R S+RL+V+ P L + + V+++ ++NSN +
Sbjct: 1 MKTKEFHFNLSHSLIEQYPSEKRGSSRLIVLDPQLQK--IYHKNSVNNILKYINSN---I 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+K +++ N + + R+ N ++ SK G+ F
Sbjct: 56 FNNSKARKSRIYAESEMSSN-----VEFLILDRIGTNLFTALVSKSKKQIIGNFYKFPEG 110
>gi|223889170|ref|ZP_03623759.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein QueA) [Borrelia burgdorferi 64b]
gi|223885419|gb|EEF56520.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein QueA) [Borrelia burgdorferi 64b]
Length = 111
Score = 89.5 bits (221), Expect = 7e-16, Method: Composition-based stats.
Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF F+LP S I R S+RL+V+ P L + + V+++ ++NSN +
Sbjct: 1 MKTKEFHFNLPHSLIEQYSSEKRGSSRLIVLDPQLQK--IYHKNSVNNILKYINSN---I 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
FNN+K +++ N + + R+ N ++ SK G+ F
Sbjct: 56 FNNSKARKSRIYAESEMSSN-----VEFLILDRIGTNLFTALVSKSKKQIIGNFYKFPEG 110
>gi|229093490|ref|ZP_04224593.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock3-42]
gi|228689961|gb|EEL43765.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Bacillus
cereus Rock3-42]
Length = 59
Score = 81.8 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M + FDF LP IA P+ R+++RLMV+ I +D+ ++L+ +
Sbjct: 1 MDINLFDFHLPEELIAQVPLEERETSRLMVLDRETGD---IEHKHFTDILSYLHGGGLLS 57
Query: 61 F 61
F
Sbjct: 58 F 58
>gi|213026254|ref|ZP_03340701.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Typhi str. 404ty]
Length = 66
Score = 81.4 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%)
Query: 298 TPGYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
PGY+ + VD L++N H PK+T ++L F G++ K Y + +F +GD L+
Sbjct: 1 HPGYQLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLMKAYASEDIQSCQFDMFGDCMLII 60
Query: 358 QKR 360
Q
Sbjct: 61 QDE 63
>gi|221217457|ref|ZP_03588928.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein QueA) [Borrelia burgdorferi 72a]
gi|224533899|ref|ZP_03674484.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi CA-11.2a]
gi|225549698|ref|ZP_03770663.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi 118a]
gi|221192735|gb|EEE18951.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine
biosynthesis protein QueA) [Borrelia burgdorferi 72a]
gi|224512902|gb|EEF83268.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi CA-11.2a]
gi|225369658|gb|EEG99106.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
burgdorferi 118a]
Length = 95
Score = 80.3 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 10/105 (9%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
M KEF F+L S I P R S+RL+V+ P L + + V+++ ++NSN +
Sbjct: 1 MKTKEFHFNLSHSLIEQYPSEKRGSSRLIVLDPQLQK--IYHKNSVNNILKYINSN---I 55
Query: 61 FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARP 105
FNN+K +++ N + + R+ N ++
Sbjct: 56 FNNSKARKSRIYAESEMSSN-----VEFLILDRIGTNLFTALVSK 95
>gi|225552488|ref|ZP_03773428.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
sp. SV1]
gi|225371486|gb|EEH00916.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
sp. SV1]
Length = 102
Score = 79.1 bits (194), Expect = 1e-12, Method: Composition-based stats.
Identities = 36/83 (43%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 151 ERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLIS 210
E G +PLPPYI KR D D YQT Y+K GS A+ TAGLHF+ +L S L+
Sbjct: 22 EDYFEKHGFVPLPPYI--KRDYDKIDENRYQTIYSKYVGSAASATAGLHFSRDLFSALLK 79
Query: 211 IGIKVYFVTLHV-GAGTFMPVKV 232
I I ++L + GA F K+
Sbjct: 80 ITILNMILSLFMWGAWDFSSYKI 102
>gi|255030238|ref|ZP_05302189.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes LO28]
Length = 46
Score = 77.2 bits (189), Expect = 4e-12, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDL 49
M V++FDFDLP IA P+ R S+RLMV+ I D +D+
Sbjct: 1 MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKESGD---IKDQHFTDI 46
>gi|289806685|ref|ZP_06537314.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Typhi str. AG3]
Length = 62
Score = 75.3 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 31/59 (52%)
Query: 302 RFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
+ + VD L++N H PK+T ++L F G++ K Y + +F +GD L+ Q
Sbjct: 1 QLKVVDCLLTNLHQPKTTHMVLTGQFAGVDLLMKAYASEDIQSCQFDMFGDCMLIIQDE 59
>gi|255030599|ref|ZP_05302550.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Listeria
monocytogenes LO28]
Length = 43
Score = 74.5 bits (182), Expect = 3e-11, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 24/40 (60%)
Query: 317 KSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
+STL+MLVSA + Y HA+ YRF+S+GD +
Sbjct: 3 ESTLIMLVSALSDRTKILAAYNHAVEEQYRFFSFGDAMFI 42
>gi|330903857|gb|EGH34429.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. japonica str. M301072PT]
Length = 103
Score = 73.0 bits (178), Expect = 6e-11, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
Query: 123 QSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQT 182
EA ++ + + L E+ + VG +PLPPYI RP + D YQT
Sbjct: 33 DGGGEAEMVARHDALFELRFAE----EVLPLLERVGHMPLPPYI--DRPDEGADRERYQT 86
Query: 183 TYAKIQGSVAAPTAGLH 199
YA+ G+VAAPTA H
Sbjct: 87 VYAQRAGAVAAPTARPH 103
>gi|330904414|gb|EGH34986.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Pseudomonas
syringae pv. japonica str. M301072PT]
Length = 63
Score = 72.6 bits (177), Expect = 9e-11, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 26/65 (40%), Gaps = 5/65 (7%)
Query: 36 SCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVS 95
++ +DL L D +VFNNT+V+ A+L G + ++ + +
Sbjct: 4 GPTGALAHRQFTDLLEHLRPGDLMVFNNTRVLPARLFGQKAS-----GGKLEILVERVLD 58
Query: 96 PNSWS 100
+
Sbjct: 59 SHRVL 63
>gi|291532259|emb|CBL05372.1| hypothetical protein MHY_01750 [Megamonas hypermegale ART12/1]
Length = 36
Score = 71.8 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 322 MLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
ML+SAF G E Y+ A+ YRF+S+GD +
Sbjct: 1 MLISAFAGREYVLSAYEEAVKEKYRFFSFGDAMFI 35
>gi|291559931|emb|CBL38731.1| S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine
synthetase) [butyrate-producing bacterium SSC/2]
Length = 47
Score = 70.3 bits (171), Expect = 5e-10, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVI 41
M V +F FDLP IA P+ R S+RL+ + N +
Sbjct: 1 MKVSDFTFDLPEELIAQDPLEDRSSSRLLTLDKNTGERSDM 41
>gi|32419276|gb|AAN85157.1| QueA [Pseudomonas syringae pv. syringae]
Length = 51
Score = 68.3 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLN 54
M V +F F+LP S IA P+ R S+RL+ + ++ +DL L
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTLDGPTGA---LAHRQFTDLLEHLR 51
>gi|319651692|ref|ZP_08005819.1| hypothetical protein HMPREF1013_02431 [Bacillus sp. 2_A_57_CT2]
gi|317396759|gb|EFV77470.1| hypothetical protein HMPREF1013_02431 [Bacillus sp. 2_A_57_CT2]
Length = 57
Score = 67.2 bits (163), Expect = 4e-09, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 19/34 (55%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPN 34
M V FDF LP IA P+ R S+RLMV+
Sbjct: 1 MKVDWFDFHLPEELIAQTPLADRTSSRLMVLDKK 34
>gi|218658868|ref|ZP_03514798.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhizobium
etli IE4771]
Length = 90
Score = 66.8 bits (162), Expect = 5e-09, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 4/91 (4%)
Query: 71 LNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQ---SRLE 127
L G+R +++S TLHMR+ P+ W +A+P K IK+GD + F L+
Sbjct: 1 LEGIRHR-DGAGGQQVSATLHMRLGPSRWKAFAKPGKRIKEGDRIAFGHSGESCFLGSLD 59
Query: 128 ATVIDKWNTGEILLVFSISGIELERQISLVG 158
ATV +K GE+ L F ++G L+ I+ +G
Sbjct: 60 ATVEEKGEAGEVTLAFDLTGPALDEAIAAIG 90
>gi|254672412|emb|CBA05737.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Neisseria
meningitidis alpha275]
Length = 43
Score = 66.0 bits (160), Expect = 8e-09, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 322 MLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLFQKR 360
MLVSAF G+ + Y++A+ YRF+SYGD +L +
Sbjct: 1 MLVSAFSGMGHIRAAYRYAVEREYRFFSYGDAMVLGRNE 39
>gi|226329118|ref|ZP_03804636.1| hypothetical protein PROPEN_03021 [Proteus penneri ATCC 35198]
gi|225202304|gb|EEG84658.1| hypothetical protein PROPEN_03021 [Proteus penneri ATCC 35198]
Length = 49
Score = 63.3 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 11 PPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVF 61
P + IA P R S RL+ + +S + +D+ +N+ D +VF
Sbjct: 2 PEALIAHYPQPQRSSCRLLSLEGETGA---LSHGIFTDVLDKINAGDLLVF 49
>gi|297518384|ref|ZP_06936770.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Escherichia coli OP50]
Length = 43
Score = 62.2 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLV 46
M V +F F+LP S IA P+ R S RL+ + ++
Sbjct: 1 MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGA---LTHGTF 43
>gi|225420425|ref|ZP_03762728.1| hypothetical protein CLOSTASPAR_06770 [Clostridium asparagiforme
DSM 15981]
gi|225040935|gb|EEG51181.1| hypothetical protein CLOSTASPAR_06770 [Clostridium asparagiforme
DSM 15981]
Length = 32
Score = 61.4 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVH 32
M VK+F+FDLP IA P+ R S+RL+V+
Sbjct: 1 MDVKDFNFDLPQELIAQDPLDDRASSRLLVLD 32
>gi|218660412|ref|ZP_03516342.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Rhizobium
etli IE4771]
Length = 38
Score = 60.6 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/37 (64%), Positives = 26/37 (70%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSC 37
M V FDFDLP RIALRP PRDSARL+VV P+
Sbjct: 1 MRVDLFDFDLPDERIALRPAEPRDSARLLVVDPHAES 37
>gi|207093734|ref|ZP_03241521.1| hypothetical protein HpylHP_13450 [Helicobacter pylori
HPKX_438_AG0C1]
Length = 32
Score = 57.6 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 17/32 (53%), Positives = 23/32 (71%)
Query: 326 AFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
A G+E+TK++Y+ AI YRFYSYGD L+
Sbjct: 1 AMIGLEKTKEIYKIAIEKKYRFYSYGDGMLIL 32
>gi|207108532|ref|ZP_03242694.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Helicobacter pylori HPKX_438_CA4C1]
Length = 60
Score = 57.6 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
Query: 1 MM---VKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAF 52
M ++ +D+ LP IA PV P++ A+L+V I+ + F
Sbjct: 1 MKEFDLESYDYYLPKELIASYPVLPKEKAKLLVYERRSQK---ITHTTFEHVLDF 52
>gi|56413498|ref|YP_150573.1| hypothetical protein SPA1315 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197362423|ref|YP_002142060.1| hypothetical protein SSPA1221 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|56127755|gb|AAV77261.1| hypothetical protein SPA1315 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197093900|emb|CAR59389.1| hypothetical protein SSPA1221 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 297
Score = 56.8 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 36/220 (16%), Positives = 74/220 (33%), Gaps = 46/220 (20%)
Query: 1 MMVKEFDFDLPPSR-IALRPVFP-----RDSARLMVVHPNLSCPLVISDHLVSDLPAFLN 54
M+ +++DF + I LRP + R+ +++V++ + I S + ++
Sbjct: 1 MLTEKYDFRITDQMTIPLRPHWIANDSYREKCKMLVLNRSKG---EIHKVDFSKVTDYIK 57
Query: 55 SNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDI 114
D I FN++ +I F RR + I L + N + + + D+
Sbjct: 58 EGDVICFNDSTII-----NYMFICKTRRNRLIKIVLEGFLPNNRVIISGLLKERLNANDV 112
Query: 115 LHFFSQD-----------GQSRLEATVIDKWNTGEILLVFSISGIELERQIS--LVGTIP 161
+ +S+ A V N ++ + G L+ + L P
Sbjct: 113 FYLVDNPEISIKVEQKFSEESQYRAVVE---NHDALICYLASHGERLDEYVDSSLFYKYP 169
Query: 162 LPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFT 201
Y++ ++K GS+ T
Sbjct: 170 ----------------DAYRSVFSKKYGSLDVDKGNFSIT 193
>gi|32419303|gb|AAN85169.1| QueA [Pseudomonas syringae pv. syringae]
Length = 35
Score = 56.4 bits (135), Expect = 7e-06, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNL 35
M V +F F+LP S IA P+ R S+RL+ +
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTLDGPT 35
>gi|32419232|gb|AAN85140.1| QueA [Pseudomonas syringae pv. syringae]
gi|32419336|gb|AAN85179.1| QueA [Pseudomonas syringae pv. syringae]
Length = 33
Score = 55.6 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHP 33
M V +F F+LP S IA P+ R S+RL+ +
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTLDG 33
>gi|30231115|gb|AAP23128.1|AF461559_3 QueA [Pseudomonas syringae pv. phaseolicola]
Length = 31
Score = 52.9 bits (126), Expect = 7e-05, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARLMVV 31
M V +F F+LP S IA P+ R S+RL+ +
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRLLTL 31
>gi|323271599|gb|EGA55019.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
Length = 112
Score = 52.2 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 35/73 (47%), Gaps = 9/73 (12%)
Query: 1 MMVKEFDFDLPPSR-IALRPVFP-----RDSARLMVVHPNLSCPLVISDHLVSDLPAFLN 54
M+ +++DF + I LRP + R+ +++V++ + I S + ++
Sbjct: 1 MLTEKYDFRITDQMTIPLRPHWIANDSYREKCKMLVLNRSKG---EIHKVDFSKVTDYIK 57
Query: 55 SNDAIVFNNTKVI 67
D I FN++ +I
Sbjct: 58 EGDVICFNDSTII 70
>gi|256027762|ref|ZP_05441596.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase
[Fusobacterium sp. D11]
Length = 33
Score = 50.2 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 3 VKEFDFDLPPSRIALRPVFPRDSARLMVV 31
+ ++D+ LP I +P PRDSA+LM++
Sbjct: 5 LNDYDYFLPEELIGQKPREPRDSAKLMLI 33
>gi|32419362|gb|AAN85193.1| QueA [Pseudomonas syringae pv. syringae]
Length = 28
Score = 50.2 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 14/28 (50%), Positives = 18/28 (64%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSARL 28
M V +F F+LP S IA P+ R S+RL
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSSRL 28
>gi|213421160|ref|ZP_03354226.1| putative isomerase [Salmonella enterica subsp. enterica serovar
Typhi str. E01-6750]
Length = 122
Score = 50.2 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/125 (17%), Positives = 48/125 (38%), Gaps = 14/125 (11%)
Query: 2 MVKEFDFDLPPSR-IALRPVFP-----RDSARLMVVHPNLSCPLVISDHLVSDLPAFLNS 55
+ +++DF + I LRP + R+ +++V++ + I S + ++
Sbjct: 1 LTEKYDFRITDQMTIPLRPHWIANDSYREKCKMLVLNRSKG---EIHKVDFSKVTDYIKE 57
Query: 56 NDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDIL 115
D I FN++ +I F RR + I L + N + + + D+
Sbjct: 58 GDVICFNDSTII-----NHMFICKTRRNRLIKIVLEGFLLNNRVIISGLLKERLNANDVF 112
Query: 116 HFFSQ 120
+
Sbjct: 113 YLVDN 117
>gi|207110724|ref|ZP_03244886.1| hypothetical protein HpylH_16840 [Helicobacter pylori
HPKX_438_CA4C1]
Length = 39
Score = 45.6 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Query: 321 LMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLLF 357
L+L S F E + + AI YRFYSYGD L+
Sbjct: 6 LLLNSHFSKKE-IQN--KIAIEKKYRFYSYGDGMLIL 39
>gi|32419325|gb|AAN85177.1| QueA [Pseudomonas syringae pv. phaseolicola]
Length = 26
Score = 45.6 bits (107), Expect = 0.012, Method: Composition-based stats.
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDSA 26
M V +F F+LP S IA P+ R S+
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRSS 26
>gi|213621226|ref|ZP_03374009.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Salmonella
enterica subsp. enterica serovar Typhi str. E98-2068]
Length = 57
Score = 44.5 bits (104), Expect = 0.028, Method: Composition-based stats.
Identities = 9/59 (15%), Positives = 17/59 (28%), Gaps = 3/59 (5%)
Query: 78 HINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNT 136
+I + + + R SK K G L + + AT+ +
Sbjct: 2 GRKASGGKIEVLVERMLDDKRILAHIRASKAPKPGTELLLGDDE---SIHATMTARHGA 57
>gi|67517151|ref|XP_658458.1| hypothetical protein AN0854.2 [Aspergillus nidulans FGSC A4]
gi|40746528|gb|EAA65684.1| hypothetical protein AN0854.2 [Aspergillus nidulans FGSC A4]
gi|259488861|tpe|CBF88653.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4]
Length = 1698
Score = 43.7 bits (102), Expect = 0.043, Method: Composition-based stats.
Identities = 31/190 (16%), Positives = 63/190 (33%), Gaps = 24/190 (12%)
Query: 16 ALRPVFPRDSARLMVVHPNL-SCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGV 74
A+ P RD L + + +L + +S +VI + +
Sbjct: 768 AIDPSRARDPETLGALTGVTIDKTRRVRARDFFNLSLYHSSG--------QVIDCRSEIL 819
Query: 75 RFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKW 134
+ + + W ++ DI +++G + E V+ +
Sbjct: 820 FRDNAAEHGPGGDLLICEVDHADRWLLFPPI-------DIGCVSARNGDKKGEIVVMIRS 872
Query: 135 NTGEILLVFSISGIELER------QISLVGTIPLPPYIARKRP--IDARDYVDYQTTYAK 186
G + +E++ I ++G P+PP I+R + AR QT +
Sbjct: 873 PPGRERRFQELLSLEIDEEDVGMEWIQMLGRTPIPPAISRSQSFIERARQRQRAQTVSSP 932
Query: 187 IQGSVAAPTA 196
+ S+A T
Sbjct: 933 NEVSLAQRTP 942
>gi|32419266|gb|AAN85154.1| QueA [Pseudomonas syringae pv. syringae]
Length = 25
Score = 43.3 bits (101), Expect = 0.059, Method: Composition-based stats.
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPRDS 25
M V +F F+LP S IA P+ R S
Sbjct: 1 MRVADFTFELPDSLIARHPLAERRS 25
>gi|32419312|gb|AAN85173.1| QueA [Pseudomonas syringae pv. syringae]
gi|32419349|gb|AAN85187.1| QueA [Pseudomonas syringae pv. syringae]
Length = 24
Score = 42.5 bits (99), Expect = 0.098, Method: Composition-based stats.
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPR 23
M V +F F+LP S IA P+ R
Sbjct: 1 MRVADFTFELPDSLIARHPLAER 23
>gi|225551901|ref|ZP_03772841.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
sp. SV1]
gi|225370899|gb|EEH00329.1| S-adenosylmethionine:tRNA ribosyltransferase-isomerase [Borrelia
sp. SV1]
Length = 40
Score = 40.6 bits (94), Expect = 0.41, Method: Composition-based stats.
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 1 MMVKEFDFDLPPSRIALRPVFPR 23
M KEF F+L S IA P +
Sbjct: 1 MKTKEFHFNLSHSLIAQYPSEKK 23
>gi|32419245|gb|AAN85142.1| QueA [Pseudomonas syringae pv. persicae]
Length = 22
Score = 40.6 bits (94), Expect = 0.42, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 1 MMVKEFDFDLPPSRIALRPVFP 22
M V +F F+LP S IA P+
Sbjct: 1 MRVADFTFELPDSLIARHPLAE 22
>gi|300787826|ref|YP_003768117.1| 5-dehydro-4-deoxyglucarate dehydratase [Amycolatopsis mediterranei
U32]
gi|299797340|gb|ADJ47715.1| 5-dehydro-4-deoxyglucarate dehydratase [Amycolatopsis mediterranei
U32]
Length = 311
Score = 39.8 bits (92), Expect = 0.70, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 52/163 (31%), Gaps = 27/163 (16%)
Query: 162 LPPYIARKRPIDARDYVDYQT--------TYAKIQGSVAAPTAGLHFTSNLLSRLISIGI 213
LPPY+ D+V Y Y + G AP A + L
Sbjct: 108 LPPYLVTGPSSGLVDFVRYAVGHSSVPVIVYHRGTGVFTAPAAASLLDIPSVVGLKDGYG 167
Query: 214 KVYFVTLHVGAGTFMPVKVEDTDDHIMHSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSL 273
V +T V T + E + + F PTA+ S K+ V+ ++++
Sbjct: 168 DVECMTRIV--TTIRSLDTERARNFL-----FFNGLPTAEV--SAKAYAAIGVARYSSAV 218
Query: 274 RLLETATTEDGIINPWSGFTNIFITPGYRFRAVDILMSNFHLP 316
G T R +D L++ F+LP
Sbjct: 219 HCFAPEIAHRFHRALGEGDT----------RVMDALLTGFYLP 251
>gi|323699629|ref|ZP_08111541.1| ABC transporter related protein [Desulfovibrio sp. ND132]
gi|323459561|gb|EGB15426.1| ABC transporter related protein [Desulfovibrio desulfuricans ND132]
Length = 913
Score = 39.5 bits (91), Expect = 0.90, Method: Composition-based stats.
Identities = 14/123 (11%), Positives = 28/123 (22%), Gaps = 22/123 (17%)
Query: 28 LMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEIS 87
L+++ + +S +L + S I+
Sbjct: 170 LLILDEPTTGVDPLSRRQFWELIERIRSG----------------------RPSMSVLIA 207
Query: 88 CTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEILLVFSISG 147
W V K + +G + G S LE + ++
Sbjct: 208 TAYMEEAERFDWLVAVDDGKKLAEGSPAELRERTGASSLEGAFLALLPEDRRRGHHELTI 267
Query: 148 IEL 150
L
Sbjct: 268 PPL 270
>gi|94490330|gb|ABF29402.1| nonribosomal peptide synthetase [Xylaria sp. BCC 1067]
Length = 6744
Score = 39.1 bits (90), Expect = 1.1, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 22/53 (41%)
Query: 169 KRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLH 221
KR D +Y T + G+ P LHF L+SR S I V +T
Sbjct: 6414 KRLKCDEDLWEYSTKWCTEDGATPVPLGSLHFQPILISRSESDHILVVRMTHA 6466
>gi|302337775|ref|YP_003802981.1| proprionate catabolism activator, Fis family [Spirochaeta
smaragdinae DSM 11293]
gi|301634960|gb|ADK80387.1| proprionate catabolism activator, Fis family [Spirochaeta
smaragdinae DSM 11293]
Length = 635
Score = 37.9 bits (87), Expect = 2.6, Method: Composition-based stats.
Identities = 20/134 (14%), Positives = 40/134 (29%), Gaps = 12/134 (8%)
Query: 27 RLMVVHPNLSCPLV-ISDHLVSDLPAFLNSNDAIVFNNT--KVITAQLNGVRFCHINRRE 83
RLM S I D+ + + V NN KV A + +
Sbjct: 195 RLMRRERERSDRFKSIMDYSFEGILSIDREGAVAVANNHALKVFPALEKAKNPLAVEKLL 254
Query: 84 KEISCTLHMRVSPNSWSVYARPSKVI---------KKGDILHFFSQDGQSRLEATVIDKW 134
++ + +R K + G ++ F + +E + K
Sbjct: 255 PQVDLSEVLRSGKKILGELVLIGKRMYTLNCAPAGDAGAVITFSNVTEIQEMEGKIRTKL 314
Query: 135 NTGEILLVFSISGI 148
+ ++ +S + I
Sbjct: 315 HKKGLVAKYSFADI 328
>gi|281413167|ref|YP_003347246.1| alpha-2-macroglobulin domain protein [Thermotoga naphthophila
RKU-10]
gi|281374270|gb|ADA67832.1| alpha-2-macroglobulin domain protein [Thermotoga naphthophila
RKU-10]
Length = 1534
Score = 37.5 bits (86), Expect = 3.2, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 38/120 (31%), Gaps = 10/120 (8%)
Query: 48 DLPAFLNSNDAI-----VFN-NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSV 101
LP+FL D I VFN +K + QL +I E S M + +
Sbjct: 769 HLPSFLREGDVIKISATVFNRTSKTLPVQLMVELPENIELLEGSSSRRFLMEANSSHTET 828
Query: 102 YARPSKVIKKGDILHFFSQDGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLV 157
+ + +G + F + G + V E + + G E +
Sbjct: 829 WTVKAVFASEGSFVKFTAVGGDLSDAVSMRLPVERFAFEREFYRIMLLDGKETLKIPEQF 888
>gi|170289587|ref|YP_001739825.1| alpha-2-macroglobulin domain-containing protein [Thermotoga sp.
RQ2]
gi|170177090|gb|ACB10142.1| alpha-2-macroglobulin domain protein [Thermotoga sp. RQ2]
Length = 1534
Score = 37.5 bits (86), Expect = 3.2, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 38/120 (31%), Gaps = 10/120 (8%)
Query: 48 DLPAFLNSNDAI-----VFN-NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSV 101
LP+FL D I VFN +K + QL +I E S M + +
Sbjct: 769 HLPSFLREGDVIKISATVFNRTSKTLPVQLMVELPENIELLEGSSSRRFLMEANSSHTET 828
Query: 102 YARPSKVIKKGDILHFFSQDGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLV 157
+ + +G + F + G + V E + + G E +
Sbjct: 829 WTVKAVFASEGSFVKFTAVGGDLSDAVSMRLPVERFAFEREFYRIMLLDGKETLKIPEQF 888
>gi|148270874|ref|YP_001245334.1| alpha-2-macroglobulin domain-containing protein [Thermotoga
petrophila RKU-1]
gi|147736418|gb|ABQ47758.1| alpha-2-macroglobulin domain protein [Thermotoga petrophila RKU-1]
Length = 1534
Score = 37.5 bits (86), Expect = 3.3, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 38/120 (31%), Gaps = 10/120 (8%)
Query: 48 DLPAFLNSNDAI-----VFN-NTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSV 101
LP+FL D I VFN +K + QL +I E S M + +
Sbjct: 769 HLPSFLREGDVIKISATVFNRTSKTLPVQLMVELPENIELLEGSSSRRFLMEANSSHTET 828
Query: 102 YARPSKVIKKGDILHFFSQDGQ----SRLEATVIDKWNTGEILLVFSISGIELERQISLV 157
+ + +G + F + G + V E + + G E +
Sbjct: 829 WTVKAVFASEGSFVKFTAVGGDLSDAVSMRLPVERFAFEREFYRIMLLDGKETLKIPEQF 888
>gi|87309999|ref|ZP_01092132.1| hypothetical protein DSM3645_26024 [Blastopirellula marina DSM
3645]
gi|87287245|gb|EAQ79146.1| hypothetical protein DSM3645_26024 [Blastopirellula marina DSM
3645]
Length = 817
Score = 37.1 bits (85), Expect = 4.3, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 45/121 (37%), Gaps = 14/121 (11%)
Query: 99 WSVYARPSKVIKKGDILHFFSQDG-QSRLEATVIDKWNTGEILLVFSISGIELERQISLV 157
W A K+ G+ + Q +E+ V E L + + + V
Sbjct: 533 WGDSAAVGKIPPAGETIALTRQFQLDGPIESAVAAITCDNEFQLFVNRREVAASAVWTEV 592
Query: 158 GTIPLPPYIARKRPIDARDYVDYQTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYF 217
++ L PY+ K P + AK G+ A P AGL+F +++ IG +
Sbjct: 593 KSVALSPYLK-KGPNELV-------VIAKNAGAGANP-AGLYFQ----AKIDLIGGESAT 639
Query: 218 V 218
+
Sbjct: 640 I 640
>gi|320011477|gb|ADW06327.1| oxidoreductase domain protein [Streptomyces flavogriseus ATCC
33331]
Length = 390
Score = 37.1 bits (85), Expect = 4.4, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 31/81 (38%), Gaps = 6/81 (7%)
Query: 122 GQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIP----LPPYIARKRPIDARDY 177
G++ L ++D G LLV R + V T P LPP RP D D
Sbjct: 293 GRTDLLENLVDHLEHGTALLVPPERTGAFMRVLEAVRTAPEPAPLPPTAWHTRPADRGDG 352
Query: 178 VDYQTTYAKIQGSVAAPTAGL 198
V I G+VAA L
Sbjct: 353 VR--RVVHGIDGTVAAAADTL 371
>gi|227540244|ref|ZP_03970293.1| beta-lactamase family protein [Sphingobacterium spiritivorum ATCC
33300]
gi|227239888|gb|EEI89903.1| beta-lactamase family protein [Sphingobacterium spiritivorum ATCC
33300]
Length = 377
Score = 36.8 bits (84), Expect = 4.8, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 25/61 (40%), Gaps = 3/61 (4%)
Query: 145 ISGIELERQISLVGTIPLPPYIARKRPIDARDYVDYQTTYAKIQGS-VAAPTAGLHFTSN 203
++G ++ + PL Y +D+ D + T YA GS VA P A +
Sbjct: 185 VTGQRFDQYVEEHVLRPLQLY--GGYCVDSLDRSRFATLYAYENGSFVAQPAAYNPRSEE 242
Query: 204 L 204
+
Sbjct: 243 I 243
>gi|125539568|gb|EAY85963.1| hypothetical protein OsI_07329 [Oryza sativa Indica Group]
Length = 451
Score = 36.8 bits (84), Expect = 5.2, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 6/76 (7%)
Query: 258 VKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAV-----DILMSN 312
++RG VG + RLLE A + + P A D +++
Sbjct: 274 ARARGEIDACVGQPAARLLEAADLPKLHYLRCVVMETLRLYPPVPLLAPHESSADCVVAG 333
Query: 313 FHLPKSTLLMLVSAFC 328
FH+P+ T+L LV+ F
Sbjct: 334 FHVPQGTML-LVNTFA 348
>gi|296109825|ref|YP_003616774.1| aminotransferase class I and II [Methanocaldococcus infernus ME]
gi|295434639|gb|ADG13810.1| aminotransferase class I and II [Methanocaldococcus infernus ME]
Length = 417
Score = 36.8 bits (84), Expect = 5.6, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 54/141 (38%), Gaps = 15/141 (10%)
Query: 2 MVKEFDFDLPP-SRIALRPVFPRDSARLMVVH-PNLSCPLVISDHLVSDLPAFLNSNDAI 59
+++E DF LP I P R+ A+++ ++ PN + ++ F ND I
Sbjct: 159 LLEENDF-LPDLENI---PKEVREKAKMLYLNYPNNPTGAKATKKFFKEVVDFAFENDVI 214
Query: 60 VFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFS 119
V ++ A + + + + + ++++ G+ L +
Sbjct: 215 VVHDAA-YGALVYDDKPLSFLSVKDAKEVGVEIHSFSKAYNMTGWRL-AFLVGNELIIKA 272
Query: 120 QDGQSRLEATVIDKWNTGEIL 140
ATV D +++G+ +
Sbjct: 273 F-------ATVKDNFDSGQFI 286
>gi|125582222|gb|EAZ23153.1| hypothetical protein OsJ_06839 [Oryza sativa Japonica Group]
Length = 376
Score = 36.8 bits (84), Expect = 5.9, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 6/76 (7%)
Query: 258 VKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAV-----DILMSN 312
++RG VG + RLLE A + + P A D +++
Sbjct: 245 ARARGEIDACVGQPAARLLEAADLPKLHYLRCVVMETLRLYPPVPLLAPHESSADCVVAG 304
Query: 313 FHLPKSTLLMLVSAFC 328
FH+P+ T+L LV+ F
Sbjct: 305 FHVPQGTML-LVNTFA 319
>gi|149927694|ref|ZP_01915946.1| probable polynucleotide adenylyltransferase protein [Limnobacter
sp. MED105]
gi|149823520|gb|EDM82750.1| probable polynucleotide adenylyltransferase protein [Limnobacter
sp. MED105]
Length = 485
Score = 36.4 bits (83), Expect = 6.3, Method: Composition-based stats.
Identities = 29/153 (18%), Positives = 49/153 (32%), Gaps = 19/153 (12%)
Query: 44 HLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEI--SCTLHMRVSPNSWSV 101
L ++ L S A+ A L G+R ++ + + H R P
Sbjct: 254 RLFDEMLKLLMSGSAM---------ACLKGLRKAGLHHGVFPLLDAILEHERGEPFLTEA 304
Query: 102 YARPSKVIKKGDILH--FFSQDGQSRLEAT-VIDKWNTGEILLVFSISGIELERQISLVG 158
AR K +K+G L F L K GE+ + ++ +
Sbjct: 305 LARTDKRVKEGKPLSPGFLFACLLWHLVLENWEKKLEQGELKFPALFAAMD-DVLAEQAE 363
Query: 159 TIPLPPYIARKRPIDARDYVDYQTTYAKIQGSV 191
+P R+ D R+ +Q + K G
Sbjct: 364 RTAIP----RRLTGDMREIWAFQPRFEKRAGKA 392
>gi|115446257|ref|NP_001046908.1| Os02g0503900 [Oryza sativa Japonica Group]
gi|48716179|dbj|BAD23219.1| putative cytochrome P450 [Oryza sativa Japonica Group]
gi|113536439|dbj|BAF08822.1| Os02g0503900 [Oryza sativa Japonica Group]
gi|215712343|dbj|BAG94470.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 524
Score = 36.4 bits (83), Expect = 6.4, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 6/76 (7%)
Query: 258 VKSRGGRIVSVGTTSLRLLETATTEDGIINPWSGFTNIFITPGYRFRAV-----DILMSN 312
++RG VG + RLLE A + + P A D +++
Sbjct: 347 ARARGEIDACVGQPAARLLEAADLPKLHYLRCVVMETLRLYPPVPLLAPHESSADCVVAG 406
Query: 313 FHLPKSTLLMLVSAFC 328
FH+P+ T+L LV+ F
Sbjct: 407 FHVPQGTML-LVNTFA 421
>gi|170047066|ref|XP_001851059.1| tetratricopeptide repeat protein, tpr [Culex quinquefasciatus]
gi|167869616|gb|EDS32999.1| tetratricopeptide repeat protein, tpr [Culex quinquefasciatus]
Length = 2066
Score = 36.4 bits (83), Expect = 6.8, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 26/68 (38%), Gaps = 2/68 (2%)
Query: 28 LMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEIS 87
L+ H L + +D SD+ + + D + + TKVI ++ + E +
Sbjct: 1511 LLKYH-ELKQVMRQADKEFSDILTKIGNGDKLTADETKVIESRFFTAERLRQEQTEGAVR 1569
Query: 88 CTLHMRVS 95
H +
Sbjct: 1570 -LFHRNLD 1576
>gi|326445740|ref|ZP_08220474.1| hypothetical protein SclaA2_31967 [Streptomyces clavuligerus ATCC
27064]
Length = 366
Score = 36.4 bits (83), Expect = 7.1, Method: Composition-based stats.
Identities = 16/114 (14%), Positives = 40/114 (35%), Gaps = 13/114 (11%)
Query: 28 LMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK---------VITAQLNGVRFCH 78
L+ + + ++ V +L A ++D ++ + + A L+GV
Sbjct: 167 LLFLAGSGGGKSTLAHRAVRELGARFLADDLVLVRPGRPVIGWPTRIALPAALDGVDPAA 226
Query: 79 INRREKEISCTLHMRV----SPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEA 128
R ++ + RV + + ++ R + G ++ G + A
Sbjct: 227 GRREQRPMDGWFRDRVLFTPAGHRRALGVRTAGPTPPGALIVVEDPGGDGPVTA 280
>gi|194366770|ref|YP_002029380.1| FAD-binding 9 siderophore-interacting domain-containing protein
[Stenotrophomonas maltophilia R551-3]
gi|194349574|gb|ACF52697.1| FAD-binding 9 siderophore-interacting domain protein
[Stenotrophomonas maltophilia R551-3]
Length = 298
Score = 36.4 bits (83), Expect = 7.9, Method: Composition-based stats.
Identities = 16/125 (12%), Positives = 38/125 (30%), Gaps = 23/125 (18%)
Query: 45 LVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSP-NSWSVYA 103
LP L + +R + E ++ +H P + W+++A
Sbjct: 69 RYRALPDELRP------------PMRTYTIRQLRAEQGEVDVDFVIHGVTGPASRWAMHA 116
Query: 104 RPSKVIKKGDILHFFSQDGQSRLEATVIDKWNTGEI----LLVFSISGIELERQISLVGT 159
+ GD + + D + + + L+ + + + +
Sbjct: 117 ------RPGDRVVLLAPDADCADSSEGWEWKPPASVGQVLLVADETALPAVAGILEELAA 170
Query: 160 IPLPP 164
+P PP
Sbjct: 171 MPDPP 175
>gi|254392288|ref|ZP_05007473.1| hypothetical protein SSCG_04843 [Streptomyces clavuligerus ATCC
27064]
gi|294816925|ref|ZP_06775567.1| Hypothetical protein SCLAV_p0385 [Streptomyces clavuligerus ATCC
27064]
gi|197705960|gb|EDY51772.1| hypothetical protein SSCG_04843 [Streptomyces clavuligerus ATCC
27064]
gi|294321740|gb|EFG03875.1| Hypothetical protein SCLAV_p0385 [Streptomyces clavuligerus ATCC
27064]
Length = 414
Score = 36.0 bits (82), Expect = 8.2, Method: Composition-based stats.
Identities = 16/114 (14%), Positives = 40/114 (35%), Gaps = 13/114 (11%)
Query: 28 LMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTK---------VITAQLNGVRFCH 78
L+ + + ++ V +L A ++D ++ + + A L+GV
Sbjct: 215 LLFLAGSGGGKSTLAHRAVRELGARFLADDLVLVRPGRPVIGWPTRIALPAALDGVDPAA 274
Query: 79 INRREKEISCTLHMRV----SPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEA 128
R ++ + RV + + ++ R + G ++ G + A
Sbjct: 275 GRREQRPMDGWFRDRVLFTPAGHRRALGVRTAGPTPPGALIVVEDPGGDGPVTA 328
>gi|118764442|emb|CAL80821.1| sylD-like NRPS/PKS [[Polyangium] brachysporum]
Length = 4181
Score = 36.0 bits (82), Expect = 9.0, Method: Composition-based stats.
Identities = 25/154 (16%), Positives = 50/154 (32%), Gaps = 12/154 (7%)
Query: 20 VFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNN-TKVITAQ-----LNG 73
+ RD RL I D ++ ++ L S A+VF + +++ L
Sbjct: 1721 LAMRDEMRLTNTSRMAQYVSPIFDVVLGEIFPALASGAAVVFGDRQRLLPGPGLIEWLAS 1780
Query: 74 VRFCHINRREKEISCTLHMRVSPNSWSVYAR------PSKVIKKGDILHFFSQDGQSRLE 127
R H ++ + + A ++ G L + +
Sbjct: 1781 ERITHWWIVPSALAMVPAAPLPDLQVLIVAGEACPPEVARRWAGGRRLLNGYGPTECAIV 1840
Query: 128 ATVIDKWNTGEILLVFSISGIELERQISLVGTIP 161
++ D W GE L++ + G +L +P
Sbjct: 1841 VSLTDYWAEGERLVLRPMGGAQLYVLDEAFREVP 1874
>gi|84501372|ref|ZP_00999577.1| 63 kDa protein [Oceanicola batsensis HTCC2597]
gi|84390663|gb|EAQ03151.1| 63 kDa protein [Oceanicola batsensis HTCC2597]
Length = 906
Score = 36.0 bits (82), Expect = 9.7, Method: Composition-based stats.
Identities = 30/156 (19%), Positives = 49/156 (31%), Gaps = 15/156 (9%)
Query: 31 VHPNLSCPLVISDHLVSDLPAFLNSNDAIVFNNTKVITAQLNGVRFCHINRREKEISCTL 90
+ L + V DLP L D V V A+L G + +R
Sbjct: 676 LAGEDRIVLATAHQHVDDLPDLLVPADDRV----DVAVARLFGQVGAELVQR----LLLA 727
Query: 91 HMRVSPNSWSVYARPSKVIKKGDILHFFSQDGQSRLEATVIDK----WNTGEILLVFSIS 146
H+R SP AR G +L + G++ + I + + +
Sbjct: 728 HLRRSP-RARGLARFGPAAGDGPVLRLHAVLGRAVGDGVEIVRQVVGLDARQFRRDRRQD 786
Query: 147 GIELERQISLVGTIPLPPYIA--RKRPIDARDYVDY 180
+E+ R +P P + +RP D
Sbjct: 787 VLEVRRLEHAEDQVPRPHLVRGIEERPPDPGPLHRV 822
Database: nr
Posted date: May 13, 2011 4:10 AM
Number of letters in database: 999,999,932
Number of sequences in database: 2,987,209
Database: /data/usr2/db/fasta/nr.01
Posted date: May 13, 2011 4:17 AM
Number of letters in database: 999,998,956
Number of sequences in database: 2,896,973
Database: /data/usr2/db/fasta/nr.02
Posted date: May 13, 2011 4:23 AM
Number of letters in database: 999,999,979
Number of sequences in database: 2,907,862
Database: /data/usr2/db/fasta/nr.03
Posted date: May 13, 2011 4:29 AM
Number of letters in database: 999,999,513
Number of sequences in database: 2,932,190
Database: /data/usr2/db/fasta/nr.04
Posted date: May 13, 2011 4:33 AM
Number of letters in database: 792,586,372
Number of sequences in database: 2,260,650
Lambda K H
0.313 0.155 0.487
Lambda K H
0.267 0.0475 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,520,184,470
Number of Sequences: 13984884
Number of extensions: 339713289
Number of successful extensions: 869957
Number of sequences better than 10.0: 2142
Number of HSP's better than 10.0 without gapping: 4165
Number of HSP's successfully gapped in prelim test: 73
Number of HSP's that attempted gapping in prelim test: 848291
Number of HSP's gapped (non-prelim): 4753
length of query: 360
length of database: 4,792,584,752
effective HSP length: 140
effective length of query: 220
effective length of database: 2,834,700,992
effective search space: 623634218240
effective search space used: 623634218240
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.2 bits)
S2: 82 (36.0 bits)