RPSBLAST alignment of GI: 254780180 and protein with PDBid: 1yy3

>1yy3_A S-adenosylmethionine:tRNA ribosyltransferase- isomerase; beta-barrel, QUEA, quein queuosine, tRNA- modification; 2.88A {Bacillus subtilis} Length = 346
 Score =  343 bits (882), Expect = 3e-95
 Identities = 149/357 (41%), Positives = 210/357 (58%), Gaps = 17/357 (4%)

Query: 1   MMVKEFDFDLPPSRIALRPVFPRDSARLMVVHPNLSCPLVISDHLVSDLPAFLNSNDAIV 60
             V  FDF+LP   IA  P+  RD++RLMV+  +      ++D     + +F N  D +V
Sbjct: 5   SKVDLFDFELPERLIAQVPLEQRDASRLMVLDKHTG---ELTDSSFKHIISFFNEGDCLV 61

Query: 61  FNNTKVITAQLNGVRFCHINRREKEISCTLHMRVSPNSWSVYARPSKVIKKGDILHFFSQ 120
            NNT+V+ A+L G +     + E      L  + + + W   A+P+K +KKG ++ F   
Sbjct: 62  LNNTRVLPARLFGTKEDTGAKVE----LLLLKQETGDKWETLAKPAKRVKKGTVVTF--- 114

Query: 121 DGQSRLEATVIDKWNTGEILLVFSISGIELERQISLVGTIPLPPYIARKRPIDARDYVDY 180
            G  RL+A   ++   G   + F   GI  E  +  +G +PLPPYI  +      D   Y
Sbjct: 115 -GDGRLKAICTEELEHGGRKMEFQYDGIFYEV-LESLGEMPLPPYIKEQLD----DKERY 168

Query: 181 QTTYAKIQGSVAAPTAGLHFTSNLLSRLISIGIKVYFVTLHVGAGTFMPVKVEDTDDHIM 240
           QT Y+K  GS AAPTAGLHFT  +L +L   G+++ F+TLHVG GTF PV  ++ ++H M
Sbjct: 169 QTVYSKEIGSAAAPTAGLHFTEEILQQLKDKGVQIEFITLHVGLGTFRPVSADEVEEHNM 228

Query: 241 HSEIGFIDAPTAQALNSVKSRGGRIVSVGTTSLRLLET-ATTEDGIINPWSGFTNIFITP 299
           H+E   +   TA ALN V+  GGRI+SVGTTS R LET A   DG     SG+T+IFI P
Sbjct: 229 HAEFYQMSEETAAALNKVRENGGRIISVGTTSTRTLETIAGEHDGQFKASSGWTSIFIYP 288

Query: 300 GYRFRAVDILMSNFHLPKSTLLMLVSAFCGIEETKKMYQHAISHAYRFYSYGDTSLL 356
           GY F+A+D +++NFHLPKS+L+MLVSA  G E   + Y HA+   YRF+S+GD  L+
Sbjct: 289 GYEFKAIDGMITNFHLPKSSLIMLVSALAGRENILRAYNHAVEEEYRFFSFGDAMLI 345