HHsearch alignment for GI: 254780181 and conserved domain: COG0615
>COG0615 TagD Cytidylyltransferase [Cell envelope biogenesis, outer membrane / Lipid metabolism].
Probab=98.63 E-value=4.2e-07 Score=62.43 Aligned_cols=134 Identities=16% Similarity=0.175 Sum_probs=82.9
Q ss_pred CCEEEEECCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCC-----CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEC
Q ss_conf 9659996589987848999999999974897999645588-----87665789899999999976420133554412420
Q gi|254780181|r 1 MMRKAVYTGSFDPITNGHMDIIIQALSFVEDLVIAIGCNS-----VKTKGFLSIQERSELIKQSIFHFIPDSSNRVSVIS 75 (182)
Q Consensus 1 MmkigifgGsFdPiH~GHL~ia~~a~~~~D~vii~~~~~p-----~k~~~~~s~e~r~~m~~~a~~~~~~~~~~~~~~~~ 75 (182)
T Consensus 1 ~~r-V~~~GtFDilH~GHi~~L~~Ak~lGd~liVv~a~de~~~~~~k~~pi~~~~qR~evl~s~ryVD------~vi~~~ 73 (140)
T COG0615 1 MKR-VWADGTFDILHPGHIEFLRQAKKLGDELIVVVARDETVIKRKKRKPIMPEEQRAEVLESLRYVD------EVILGA 73 (140)
T ss_pred CCE-EEEEEEEEEECHHHHHHHHHHHHHCCEEEEEEECCHHHHHHCCCCCCCCHHHHHHHHHCCCCHH------EEEECC
T ss_conf 937-9980389985665999999999858969999964578888508999888899999997276254------042089
Q ss_pred CCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHC
Q ss_conf 333332210014970799943765201246779989876479986899706857211326999999985
Q gi|254780181|r 76 FEGLAVNLAKDISAQVIVRGLRDMTDFDYEMRMTSVNRCLCPEIATIALFAKESSRYVTSTLIRHLISI 144 (182)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~l~~~~~~~~ISST~IR~~i~~ 144 (182)
T Consensus 74 p~~~~~~~i~~~k~Div~lG~D~~~d~~~l~--~~~~k-~G~~~~v~R~~g~~~~~~~st~~i~~~i~~ 139 (140)
T COG0615 74 PWDIKFEDIEEYKPDIVVLGDDQKFDEDDLK--YELVK-RGLFVEVKRTEGVSTCELISTSDIIKRILE 139 (140)
T ss_pred CCCCCHHHHHHHCCCEEEECCCCCCCHHHHH--HHHHH-CCCEEEEEECCCCCCCCCCCHHHHHHHHHC
T ss_conf 6546768999959999997798767768999--99997-698258984157456764564889999860