HHsearch alignment for GI: 254780181 and conserved domain: COG2870

>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane].
Probab=95.29  E-value=0.24  Score=28.16  Aligned_cols=129  Identities=16%  Similarity=0.212  Sum_probs=71.7

Q ss_pred             CEEEEECCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCC-C-----CCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEC
Q ss_conf             6599965899878489999999999748979996455888-7-----665789899999999976420133554412420
Q gi|254780181|r    2 MRKAVYTGSFDPITNGHMDIIIQALSFVEDLVIAIGCNSV-K-----TKGFLSIQERSELIKQSIFHFIPDSSNRVSVIS   75 (182)
Q Consensus         2 mkigifgGsFdPiH~GHL~ia~~a~~~~D~vii~~~~~p~-k-----~~~~~s~e~r~~m~~~a~~~~~~~~~~~~~~~~   75 (182)
T Consensus       332 ~~vvfTNGcFDIlH~GHvsyL~~Ar~lgd~Livg~NsDaSvkrLKG~~RPin~~~~Ra~vL-a~L~~V------D~vV~F  404 (467)
T COG2870         332 KKVVFTNGCFDILHAGHVTYLAQARALGDRLIVGVNSDASVKRLKGESRPINSEEDRAAVL-AALESV------DLVVIF  404 (467)
T ss_pred             CEEEEECCHHHHCCCCHHHHHHHHHHHCCEEEEEECCCHHHHHHCCCCCCCCCHHHHHHHH-HHCCCC------EEEEEE
T ss_conf             7388733403323453788999998638859999537124455239998888278789998-631540------089982


Q ss_pred             CCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHCC
Q ss_conf             3333322100149707999437652012467799898764799868997068572113269999999859
Q gi|254780181|r   76 FEGLAVNLAKDISAQVIVRGLRDMTDFDYEMRMTSVNRCLCPEIATIALFAKESSRYVTSTLIRHLISID  145 (182)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~l~~~~~~~~ISST~IR~~i~~g  145 (182)
T Consensus       405 ~EdTP~~LI~~~~PdilVKGgDy~~~~i~g~---~~--v~~~GG~v~~i~f~~---g~STt~ii~ki~~~  466 (467)
T COG2870         405 DEDTPEELIEAVKPDILVKGGDYKIEKIVGA---DI--VEAYGGEVLLIPFEE---GKSTTKIIEKIRAK  466 (467)
T ss_pred             CCCCHHHHHHHHCCCEEECCCCCCHHHCCCH---HH--HHHCCCEEEEEECCC---CCCHHHHHHHHHCC
T ss_conf             7999899998738665870688872440323---66--553397599986446---87389999998615