HHsearch alignment for GI: 254780181 and conserved domain: COG2870
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane].
Probab=95.29 E-value=0.24 Score=28.16 Aligned_cols=129 Identities=16% Similarity=0.212 Sum_probs=71.7
Q ss_pred CEEEEECCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCC-C-----CCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEC
Q ss_conf 6599965899878489999999999748979996455888-7-----665789899999999976420133554412420
Q gi|254780181|r 2 MRKAVYTGSFDPITNGHMDIIIQALSFVEDLVIAIGCNSV-K-----TKGFLSIQERSELIKQSIFHFIPDSSNRVSVIS 75 (182)
Q Consensus 2 mkigifgGsFdPiH~GHL~ia~~a~~~~D~vii~~~~~p~-k-----~~~~~s~e~r~~m~~~a~~~~~~~~~~~~~~~~ 75 (182)
T Consensus 332 ~~vvfTNGcFDIlH~GHvsyL~~Ar~lgd~Livg~NsDaSvkrLKG~~RPin~~~~Ra~vL-a~L~~V------D~vV~F 404 (467)
T COG2870 332 KKVVFTNGCFDILHAGHVTYLAQARALGDRLIVGVNSDASVKRLKGESRPINSEEDRAAVL-AALESV------DLVVIF 404 (467)
T ss_pred CEEEEECCHHHHCCCCHHHHHHHHHHHCCEEEEEECCCHHHHHHCCCCCCCCCHHHHHHHH-HHCCCC------EEEEEE
T ss_conf 7388733403323453788999998638859999537124455239998888278789998-631540------089982
Q ss_pred CCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHCC
Q ss_conf 3333322100149707999437652012467799898764799868997068572113269999999859
Q gi|254780181|r 76 FEGLAVNLAKDISAQVIVRGLRDMTDFDYEMRMTSVNRCLCPEIATIALFAKESSRYVTSTLIRHLISID 145 (182)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~l~~~~~~~~ISST~IR~~i~~g 145 (182)
T Consensus 405 ~EdTP~~LI~~~~PdilVKGgDy~~~~i~g~---~~--v~~~GG~v~~i~f~~---g~STt~ii~ki~~~ 466 (467)
T COG2870 405 DEDTPEELIEAVKPDILVKGGDYKIEKIVGA---DI--VEAYGGEVLLIPFEE---GKSTTKIIEKIRAK 466 (467)
T ss_pred CCCCHHHHHHHHCCCEEECCCCCCHHHCCCH---HH--HHHCCCEEEEEECCC---CCCHHHHHHHHHCC
T ss_conf 7999899998738665870688872440323---66--553397599986446---87389999998615