HHsearch alignment for GI: 254780181 and conserved domain: TIGR01510

>TIGR01510 coaD_prev_kdtB pantetheine-phosphate adenylyltransferase; InterPro: IPR001980 Temperature-sensitive mutants of Escherichia coli, defective in the transfer of 3-deoxy-D-manno-octulosonic acid (KDO) from CMP-KDO to a tetraacyldisaccharide 1,4'-bisphosphate precursor of lipid A, have been used to map KDO transferase activity on the E. coli chromosome . The KDO transferase gene, designated kdtA, was shown to code for a 43kDa polypeptide. Overexpression of this single gene product greatly stimulates incorporation of two stereochemically distinct KDO residues during lipopolysaccharide biosynthesis in extracts of E. coli . From these experiments this protein was thought to play a role in lipopolysaccharide biosynthesis, however now it is annotated as phosphopantetheine adenylyltransferase (2.7.7.3 from EC), which catalyses the reversible transfer of an adenylyl group from ATP to 4'-phosphopantetheine to give dephospho-CoA (DPCOA) and pyrophosphate in the fourth (and penultimate) step of coenzyme A biosynthesis .; GO: 0004595 pantetheine-phosphate adenylyltransferase activity, 0015937 coenzyme A biosynthetic process.
Probab=100.00  E-value=5.7e-37  Score=240.38  Aligned_cols=158  Identities=42%  Similarity=0.693  Sum_probs=147.4

Q ss_pred             EEEECCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCC-CCCC
Q ss_conf             999658998784899999999997489799964558887665789899999999976420133554412420333-3322
Q gi|254780181|r    4 KAVYTGSFDPITNGHMDIIIQALSFVEDLVIAIGCNSVKTKGFLSIQERSELIKQSIFHFIPDSSNRVSVISFEG-LAVN   82 (182)
Q Consensus         4 igifgGsFdPiH~GHL~ia~~a~~~~D~vii~~~~~p~k~~~~~s~e~r~~m~~~a~~~~~~~~~~~~~~~~~~~-~~~~   82 (182)
T Consensus         1 ~A~YPGSFDP~T~GHLDiikRa~~lFDeV~Vav~~N~~K-~~~f~~eeR~~~~~~~tk~~l~~-~~NV~V~~f~~~L~Vd   78 (163)
T TIGR01510         1 IALYPGSFDPITNGHLDIIKRALKLFDEVIVAVAINPSK-KPLFSLEERVELIEDATKKHLKK-IPNVEVDVFDGRLLVD   78 (163)
T ss_pred             CEECCCCCCCCCCCHHHHHHHHHHHCCEEEEEEEECCCC-CCCCCHHHHHHHHHHHHHHHHCC-CCCEEEEECCCCEEEE
T ss_conf             955488899874363889999986221777888874889-85689899999999999997236-9814898406712121


Q ss_pred             CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHH---CCCCHHHCCCHHHHHH
Q ss_conf             1001497079994376520124677998987647998689970685721132699999998---5999558399999999
Q gi|254780181|r   83 LAKDISAQVIVRGLRDMTDFDYEMRMTSVNRCLCPEIATIALFAKESSRYVTSTLIRHLIS---IDADITSFVPDPVCVF  159 (182)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~l~~~~~~~~ISST~IR~~i~---~g~~i~~lVP~~V~~y  159 (182)
T Consensus        79 ~Ak~~~a~~ivRGlR~~~DFEYE~~~~~~N~~La~eieTVFL~~~~~~~~~SSs~Vke~~~PeG~ggDv~~~VP~~V~~~  158 (163)
T TIGR01510        79 YAKELGATFIVRGLRAVTDFEYELQMALMNQKLAPEIETVFLMASPEYAAVSSSLVKEIASPEGFGGDVSNLVPPAVAAK  158 (163)
T ss_pred             EHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHH
T ss_conf             01366870898601476607899999999997557986897278722366676788875077988788101278889999


Q ss_pred             HHHH
Q ss_conf             9999
Q gi|254780181|r  160 LKNI  163 (182)
Q Consensus       160 Ik~~  163 (182)
T Consensus       159 L~~k  162 (163)
T TIGR01510       159 LKAK  162 (163)
T ss_pred             HHHC
T ss_conf             9851