HHsearch alignment for GI: 254780181 and conserved domain: TIGR01510
>TIGR01510 coaD_prev_kdtB pantetheine-phosphate adenylyltransferase; InterPro: IPR001980 Temperature-sensitive mutants of Escherichia coli, defective in the transfer of 3-deoxy-D-manno-octulosonic acid (KDO) from CMP-KDO to a tetraacyldisaccharide 1,4'-bisphosphate precursor of lipid A, have been used to map KDO transferase activity on the E. coli chromosome . The KDO transferase gene, designated kdtA, was shown to code for a 43kDa polypeptide. Overexpression of this single gene product greatly stimulates incorporation of two stereochemically distinct KDO residues during lipopolysaccharide biosynthesis in extracts of E. coli . From these experiments this protein was thought to play a role in lipopolysaccharide biosynthesis, however now it is annotated as phosphopantetheine adenylyltransferase (2.7.7.3 from EC), which catalyses the reversible transfer of an adenylyl group from ATP to 4'-phosphopantetheine to give dephospho-CoA (DPCOA) and pyrophosphate in the fourth (and penultimate) step of coenzyme A biosynthesis .; GO: 0004595 pantetheine-phosphate adenylyltransferase activity, 0015937 coenzyme A biosynthetic process.
Probab=100.00 E-value=5.7e-37 Score=240.38 Aligned_cols=158 Identities=42% Similarity=0.693 Sum_probs=147.4
Q ss_pred EEEECCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCC-CCCC
Q ss_conf 999658998784899999999997489799964558887665789899999999976420133554412420333-3322
Q gi|254780181|r 4 KAVYTGSFDPITNGHMDIIIQALSFVEDLVIAIGCNSVKTKGFLSIQERSELIKQSIFHFIPDSSNRVSVISFEG-LAVN 82 (182)
Q Consensus 4 igifgGsFdPiH~GHL~ia~~a~~~~D~vii~~~~~p~k~~~~~s~e~r~~m~~~a~~~~~~~~~~~~~~~~~~~-~~~~ 82 (182)
T Consensus 1 ~A~YPGSFDP~T~GHLDiikRa~~lFDeV~Vav~~N~~K-~~~f~~eeR~~~~~~~tk~~l~~-~~NV~V~~f~~~L~Vd 78 (163)
T TIGR01510 1 IALYPGSFDPITNGHLDIIKRALKLFDEVIVAVAINPSK-KPLFSLEERVELIEDATKKHLKK-IPNVEVDVFDGRLLVD 78 (163)
T ss_pred CEECCCCCCCCCCCHHHHHHHHHHHCCEEEEEEEECCCC-CCCCCHHHHHHHHHHHHHHHHCC-CCCEEEEECCCCEEEE
T ss_conf 955488899874363889999986221777888874889-85689899999999999997236-9814898406712121
Q ss_pred CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHH---CCCCHHHCCCHHHHHH
Q ss_conf 1001497079994376520124677998987647998689970685721132699999998---5999558399999999
Q gi|254780181|r 83 LAKDISAQVIVRGLRDMTDFDYEMRMTSVNRCLCPEIATIALFAKESSRYVTSTLIRHLIS---IDADITSFVPDPVCVF 159 (182)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~l~~~~~~~~ISST~IR~~i~---~g~~i~~lVP~~V~~y 159 (182)
T Consensus 79 ~Ak~~~a~~ivRGlR~~~DFEYE~~~~~~N~~La~eieTVFL~~~~~~~~~SSs~Vke~~~PeG~ggDv~~~VP~~V~~~ 158 (163)
T TIGR01510 79 YAKELGATFIVRGLRAVTDFEYELQMALMNQKLAPEIETVFLMASPEYAAVSSSLVKEIASPEGFGGDVSNLVPPAVAAK 158 (163)
T ss_pred EHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHH
T ss_conf 01366870898601476607899999999997557986897278722366676788875077988788101278889999
Q ss_pred HHHH
Q ss_conf 9999
Q gi|254780181|r 160 LKNI 163 (182)
Q Consensus 160 Ik~~ 163 (182)
T Consensus 159 L~~k 162 (163)
T TIGR01510 159 LKAK 162 (163)
T ss_pred HHHC
T ss_conf 9851