HHsearch alignment for GI: 254780181 and conserved domain: cd02039
>cd02039 cytidylyltransferase_like Cytidylyltransferase-like domain.Many ofthese proteins are known to use CTP or ATP and release pyrophosphate. Protein families that contain at least one copy of this domain include citrate lyase ligase, pantoate-beta-alanine ligase, glycerol-3-phosphate cytidyltransferase, ADP-heptose synthase, phosphocholine cytidylyltransferase, lipopolysaccharide core biosynthesis protein KdtB, the bifunctional protein NadR, and a number whose function is unknown.
Probab=99.66 E-value=2e-16 Score=117.98 Aligned_cols=134 Identities=22% Similarity=0.234 Sum_probs=82.9
Q ss_pred EEECCCCCCCCHHHHHHHHHHHHHC-CEEEEECCCCCCCC--CCCCCHHHHHHHHHHHHHHHCCCCCCCC--EEECCCCC
Q ss_conf 9965899878489999999999748-97999645588876--6578989999999997642013355441--24203333
Q gi|254780181|r 5 AVYTGSFDPITNGHMDIIIQALSFV-EDLVIAIGCNSVKT--KGFLSIQERSELIKQSIFHFIPDSSNRV--SVISFEGL 79 (182)
Q Consensus 5 gifgGsFdPiH~GHL~ia~~a~~~~-D~vii~~~~~p~k~--~~~~s~e~r~~m~~~a~~~~~~~~~~~~--~~~~~~~~ 79 (182)
T Consensus 1 vi~~G~FDp~H~GH~~li~~a~~~~~~~~~v~~~~~~~~~~~~~~~~~~~R~~~l~~~~~~~~v~~~~~~~~~~~~~~~~ 80 (141)
T cd02039 1 VLAGGSFDPVHLGHLALIERAKELALDELIVGVFSDPPKKVPKPLFSLEERLEMLEAAGKVDEVVVLEFDRFSWSYTVDF 80 (141)
T ss_pred CEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEHHHCCCCCCHHHH
T ss_conf 98944648767999999999999789961799748984335888899999999999748986698513313377889999
Q ss_pred CCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCC--CCCCCCHHHHHHH
Q ss_conf 3221001497079994376520124677998987647998689970685--7211326999999
Q gi|254780181|r 80 AVNLAKDISAQVIVRGLRDMTDFDYEMRMTSVNRCLCPEIATIALFAKE--SSRYVTSTLIRHL 141 (182)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~l~~~~--~~~~ISST~IR~~ 141 (182)
T Consensus 81 ~~~~~~~~~~~~ivvG~D~~~g~~~~~~~~~--~~~~~~~~~~vi-~~~~~~~~~iSSt~IR~~ 141 (141)
T cd02039 81 LKKLLEKLNADVVVVGDDFLFGFDRWGNLRY--EELKSGGEVVVV-PRTGYDGEGISSTRIRER 141 (141)
T ss_pred HHHHHHHCCCCEEEECCCCCCCCCCCCCHHH--HHHHCCCEEEEE-CCCCCCCCEECCCHHHCC
T ss_conf 9999963787449987741458863069899--997769889997-886779967673463079