HHsearch alignment for GI: 254780181 and conserved domain: cd02166
>cd02166 NMNAT_Archaea This family of archaeal proteins exhibits nicotinamide-nucleotide adenylyltransferase (NMNAT) activity utilizing the salvage pathway to synthesize NAD. In some cases, the enzyme was tested and found also to have the activity of nicotinate-nucleotide adenylyltransferase an enzyme of NAD de novo biosynthesis, although with a higher Km. In some archaeal species, a number of proteins which are uncharacterized with respect to activity, are also present.
Probab=99.93 E-value=2.4e-25 Score=171.15 Aligned_cols=148 Identities=25% Similarity=0.281 Sum_probs=97.9
Q ss_pred EEECCCCCCCCHHHHHHHHHHHHHCCEEEEECCCC--CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEE----ECCCC
Q ss_conf 99658998784899999999997489799964558--8876657898999999999764201335544124----20333
Q gi|254780181|r 5 AVYTGSFDPITNGHMDIIIQALSFVEDLVIAIGCN--SVKTKGFLSIQERSELIKQSIFHFIPDSSNRVSV----ISFEG 78 (182)
Q Consensus 5 gifgGsFdPiH~GHL~ia~~a~~~~D~vii~~~~~--p~k~~~~~s~e~r~~m~~~a~~~~~~~~~~~~~~----~~~~~ 78 (182)
T Consensus 2 ~~~~GrFqP~h~GHl~~i~~a~~~~d~~ii~igs~~~~~~~~NPft~~ER~~Mi~~al~~~~~~~~~~~ivpi~Di~~~~ 81 (163)
T cd02166 2 ALFIGRFQPFHLGHLQVIKWILEEVDELIIGIGSAQESHTLRNPFTAGERVLMIRKALEEAGIDLSRYYIIPVPDIETNA 81 (163)
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHH
T ss_conf 45870459986789999999997489279997778667778899889999999999999669876518998566544077
Q ss_pred CCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH-CCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCHHHCCCHHHH
Q ss_conf 3322100149707999437652012467799898764-799868997068572113269999999859995583999999
Q gi|254780181|r 79 LAVNLAKDISAQVIVRGLRDMTDFDYEMRMTSVNRCL-CPEIATIALFAKESSRYVTSTLIRHLISIDADITSFVPDPVC 157 (182)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~i~l~~~~~~~~ISST~IR~~i~~g~~i~~lVP~~V~ 157 (182)
T Consensus 82 ~wv~~v~~~~p~~~~~~s~~~~----------v~~lf~~~g~~V~-~~p~~~r~~~SsT~IR~~~~~g~~w~~lVP~~Va 150 (163)
T cd02166 82 LWVGYVKSLTPPFDVVYSGNPL----------VARLFKEAGYEVR-RPPMFNRDEYSGTEIRRLMLGDEDWESLVPKSVA 150 (163)
T ss_pred HHHHHHHHHCCCEEEEEECCHH----------HHHHHHHCCCEEE-CCCCCCCCCCCHHHHHHHHHCCCCHHHHCCHHHH
T ss_conf 8999999738972799818789----------9998888199286-4675246755389999999869985683999999
Q ss_pred HHHHHH
Q ss_conf 999999
Q gi|254780181|r 158 VFLKNI 163 (182)
Q Consensus 158 ~yIk~~ 163 (182)
T Consensus 151 ~~i~ei 156 (163)
T cd02166 151 EVIDEI 156 (163)
T ss_pred HHHHHC
T ss_conf 999983