HHsearch results for GI: 254780181 and protein with PDBid: 1f9a_A

>1f9a_A Hypothetical protein MJ0541; alpha/beta, transferase, structural genomics; HET: ATP; 2.00A {Methanocaldococcus jannaschii} SCOP: c.26.1.3
Probab=99.94  E-value=1.2e-26  Score=177.53  Aligned_cols=152  Identities=18%  Similarity=0.211  Sum_probs=96.5

Q ss_pred             CEEEEECCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCC--CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC-EEECCCC
Q ss_conf             659996589987848999999999974897999645588--8766578989999999997642013355441-2420333
Q gi|254780181|r    2 MRKAVYTGSFDPITNGHMDIIIQALSFVEDLVIAIGCNS--VKTKGFLSIQERSELIKQSIFHFIPDSSNRV-SVISFEG   78 (182)
Q Consensus         2 mkigifgGsFdPiH~GHL~ia~~a~~~~D~vii~~~~~p--~k~~~~~s~e~r~~m~~~a~~~~~~~~~~~~-~~~~~~~   78 (182)
                      || |+|||||||+|+||+.++++|++.+|+++|+++.++  ++....++.++|.+|++.+............ .......
T Consensus         1 Mk-gi~~GsFdP~H~GH~~li~~a~~~~d~v~v~~~~~~~~~~~~~~~~~~~R~~mi~~~~~~~~~~~~~~~~~~~~~~~   79 (168)
T 1f9a_A            1 LR-GFIIGRFQPFHKGHLEVIKKIAEEVDEIIIGIGSAQKSHTLENPFTAGERILMITQSLKDYDLTYYPIPIKDIEFNS   79 (168)
T ss_dssp             CE-EEEEECCTTCCHHHHHHHHHHTTTCSEEEEEECSTTCCSSSSCCSCHHHHHHHHHHHHTTSSCEEEEEECCCCSCGG
T ss_pred             CE-EEEECCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHH
T ss_conf             96-89952459899999999999999789748980478601367888899999999999987679608984046642077


Q ss_pred             CCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCHHHCCCHHHHH
Q ss_conf             33221001497079994376520124677998987647998689970685721132699999998599955839999999
Q gi|254780181|r   79 LAVNLAKDISAQVIVRGLRDMTDFDYEMRMTSVNRCLCPEIATIALFAKESSRYVTSTLIRHLISIDADITSFVPDPVCV  158 (182)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~l~~~~~~~~ISST~IR~~i~~g~~i~~lVP~~V~~  158 (182)
                      .+..+.......+.+....       +.......+  ..+.+.. .........||||.||++++.|++|+++||++|++
T Consensus        80 ~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~--~~~~~v~-~~~~~~~~~ISST~IR~~i~~g~~~~~~vP~~V~~  149 (168)
T 1f9a_A           80 IWVSYVESLTPPFDIVYSG-------NPLVRVLFE--ERGYEVK-RPEMFNRKEYSGTEIRRRMLNGEKWEHLVPKAVVD  149 (168)
T ss_dssp             GHHHHHHHHSCCCSEEECC-------CHHHHHHHH--HTTCEEE-CCCCCSTTTSSHHHHHHHHHHTCCCGGGSCHHHHH
T ss_pred             HHHHHHHHHCCCEEEEECC-------CHHHHHHHH--CCCCEEE-EECCCCCCCCCHHHHHHHHHCCCCHHHHCCHHHHH
T ss_conf             8999998725867999877-------099998876--4898699-83244666766799999998599867957999999


Q ss_pred             HHHHHH
Q ss_conf             999999
Q gi|254780181|r  159 FLKNIV  164 (182)
Q Consensus       159 yIk~~~  164 (182)
                      ||++..
T Consensus       150 ~i~~~~  155 (168)
T 1f9a_A          150 VIKEIK  155 (168)
T ss_dssp             HHHHHT
T ss_pred             HHHHCC
T ss_conf             999869