HHsearch results for GI: 254780181 and protein with PDBid: 1k4m_A

>1k4m_A NAMN adenylyltransferase; nucleotidyltransferase; HET: NAD CIT; 1.90A {Escherichia coli} SCOP: c.26.1.3 PDB: 1k4k_A*
Probab=99.93  E-value=4e-26  Score=174.51  Aligned_cols=165  Identities=14%  Similarity=0.167  Sum_probs=94.5

Q ss_pred             CCEE-EEECCCCCCCCHHHHHHHHHHHHH--CCEEEEECCCCCCC-CCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEECC
Q ss_conf             9659-996589987848999999999974--89799964558887-6657898999999999764201335544124203
Q gi|254780181|r    1 MMRK-AVYTGSFDPITNGHMDIIIQALSF--VEDLVIAIGCNSVK-TKGFLSIQERSELIKQSIFHFIPDSSNRVSVISF   76 (182)
Q Consensus         1 Mmki-gifgGsFdPiH~GHL~ia~~a~~~--~D~vii~~~~~p~k-~~~~~s~e~r~~m~~~a~~~~~~~~~~~~~~~~~   76 (182)
                      |+++ |||||||||+|+||+.++++|++.  +|+|+++|+.++++ .........+..++..+.................
T Consensus         1 ~~~~~ai~gGSFNP~h~gHl~~~~~a~~~~~~d~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (213)
T 1k4m_A            1 MKSLQALFGGTFDPVHYGHLKPVETLANLIGLTRVTIIPNNVPPHRPQPEANSVQRKHMLELAIADKPLFTLDERELKRN   80 (213)
T ss_dssp             CCCCEEEEEECCTTCCHHHHHHHHHHHHHHTCSCEEEEECSSCTTSCCCSSCHHHHHHHHHHHHTTCTTEEECCHHHHCS
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHCCC
T ss_conf             99767997056082649999999999998099999999948885334556209999999866664234420110001146


Q ss_pred             C--------CCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHH---------------------------HHHCC----
Q ss_conf             3--------33322100149707999437652012467799898---------------------------76479----
Q gi|254780181|r   77 E--------GLAVNLAKDISAQVIVRGLRDMTDFDYEMRMTSVN---------------------------RCLCP----  117 (182)
Q Consensus        77 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~l~~----  117 (182)
                      .        .................+.+....+..|..+....                           .....    
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~R~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (213)
T 1k4m_A           81 APSYTAQTLKEWRQEQGPDVPLAFIIGQDSLLTFPTWYEYETILDNAHLIVCRRPGYPLEMAQPQYQQWLEDHLTHNPED  160 (213)
T ss_dssp             SCCCHHHHHHHHHHHHCTTSCEEEEEEHHHHHHGGGSTTHHHHHHHCEEEEECCTTCCSSCSSHHHHHHHHHHBCSCTTH
T ss_pred             CCCCEEEHHHHHHHHCCCCCEEEECCCCHHHHCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             77510001666663127774488415730010010155399983787399993799636667899999998630000234


Q ss_pred             ----CCCEEEEECCCCCCCCCHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHH
Q ss_conf             ----9868997068572113269999999859995583999999999999998
Q gi|254780181|r  118 ----EIATIALFAKESSRYVTSTLIRHLISIDADITSFVPDPVCVFLKNIVIS  166 (182)
Q Consensus       118 ----~~~~i~l~~~~~~~~ISST~IR~~i~~g~~i~~lVP~~V~~yIk~~~~~  166 (182)
                          ....+.. ...+..+||||.||++++.|++|+.|||++|.+||++.-+|
T Consensus       161 ~~~~~~~~~~~-~~~~~~~ISST~IR~~l~~~~~i~~lvp~~V~~yI~~~~LY  212 (213)
T 1k4m_A          161 LHLQPAGKIYL-AETPWFNISATIIRERLQNGESCEDLLPEPVLTYINQQGLY  212 (213)
T ss_dssp             HHHSSSCCEEE-ECCCCCCCCHHHHHHHHHTTCCCTTTSCHHHHHHHHHHTTT
T ss_pred             HHCCCCCEEEE-ECCCCCCCCHHHHHHHHHCCCCCHHHCCHHHHHHHHHCCCC
T ss_conf             31277864999-26987870999999999849992150899999999974999