HHsearch results for GI: 254780181 and protein with PDBid: 1k4m_A
>1k4m_A NAMN adenylyltransferase; nucleotidyltransferase; HET: NAD CIT; 1.90A {Escherichia coli} SCOP: c.26.1.3 PDB: 1k4k_A*
Probab=99.93 E-value=4e-26 Score=174.51 Aligned_cols=165 Identities=14% Similarity=0.167 Sum_probs=94.5
Q ss_pred CCEE-EEECCCCCCCCHHHHHHHHHHHHH--CCEEEEECCCCCCC-CCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEECC
Q ss_conf 9659-996589987848999999999974--89799964558887-6657898999999999764201335544124203
Q gi|254780181|r 1 MMRK-AVYTGSFDPITNGHMDIIIQALSF--VEDLVIAIGCNSVK-TKGFLSIQERSELIKQSIFHFIPDSSNRVSVISF 76 (182)
Q Consensus 1 Mmki-gifgGsFdPiH~GHL~ia~~a~~~--~D~vii~~~~~p~k-~~~~~s~e~r~~m~~~a~~~~~~~~~~~~~~~~~ 76 (182)
|+++ |||||||||+|+||+.++++|++. +|+|+++|+.++++ .........+..++..+.................
T Consensus 1 ~~~~~ai~gGSFNP~h~gHl~~~~~a~~~~~~d~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (213)
T 1k4m_A 1 MKSLQALFGGTFDPVHYGHLKPVETLANLIGLTRVTIIPNNVPPHRPQPEANSVQRKHMLELAIADKPLFTLDERELKRN 80 (213)
T ss_dssp CCCCEEEEEECCTTCCHHHHHHHHHHHHHHTCSCEEEEECSSCTTSCCCSSCHHHHHHHHHHHHTTCTTEEECCHHHHCS
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHCCC
T ss_conf 99767997056082649999999999998099999999948885334556209999999866664234420110001146
Q ss_pred C--------CCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHH---------------------------HHHCC----
Q ss_conf 3--------33322100149707999437652012467799898---------------------------76479----
Q gi|254780181|r 77 E--------GLAVNLAKDISAQVIVRGLRDMTDFDYEMRMTSVN---------------------------RCLCP---- 117 (182)
Q Consensus 77 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~l~~---- 117 (182)
. .................+.+....+..|..+.... .....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (213)
T 1k4m_A 81 APSYTAQTLKEWRQEQGPDVPLAFIIGQDSLLTFPTWYEYETILDNAHLIVCRRPGYPLEMAQPQYQQWLEDHLTHNPED 160 (213)
T ss_dssp SCCCHHHHHHHHHHHHCTTSCEEEEEEHHHHHHGGGSTTHHHHHHHCEEEEECCTTCCSSCSSHHHHHHHHHHBCSCTTH
T ss_pred CCCCEEEHHHHHHHHCCCCCEEEECCCCHHHHCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 77510001666663127774488415730010010155399983787399993799636667899999998630000234
Q ss_pred ----CCCEEEEECCCCCCCCCHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHH
Q ss_conf ----9868997068572113269999999859995583999999999999998
Q gi|254780181|r 118 ----EIATIALFAKESSRYVTSTLIRHLISIDADITSFVPDPVCVFLKNIVIS 166 (182)
Q Consensus 118 ----~~~~i~l~~~~~~~~ISST~IR~~i~~g~~i~~lVP~~V~~yIk~~~~~ 166 (182)
....+.. ...+..+||||.||++++.|++|+.|||++|.+||++.-+|
T Consensus 161 ~~~~~~~~~~~-~~~~~~~ISST~IR~~l~~~~~i~~lvp~~V~~yI~~~~LY 212 (213)
T 1k4m_A 161 LHLQPAGKIYL-AETPWFNISATIIRERLQNGESCEDLLPEPVLTYINQQGLY 212 (213)
T ss_dssp HHHSSSCCEEE-ECCCCCCCCHHHHHHHHHTTCCCTTTSCHHHHHHHHHHTTT
T ss_pred HHCCCCCEEEE-ECCCCCCCCHHHHHHHHHCCCCCHHHCCHHHHHHHHHCCCC
T ss_conf 31277864999-26987870999999999849992150899999999974999