HHsearch results for GI: 254780181 and protein with PDBid: 1kam_A
>1kam_A Deamido-NAD(+), nicotinate-nucleotide adenylyltransferase; rossman fold; 2.10A {Bacillus subtilis} SCOP: c.26.1.3 PDB: 1kaq_A*
Probab=99.93 E-value=5.2e-26 Score=173.81 Aligned_cols=165 Identities=16% Similarity=0.155 Sum_probs=94.5
Q ss_pred CEEEEECCCCCCCCHHHHHHHHHHHHHC--CEEEEECCCCCCCCCCC--CCHHHHHHHHHHHHHHHCCCCCCCCEEE---
Q ss_conf 6599965899878489999999999748--97999645588876657--8989999999997642013355441242---
Q gi|254780181|r 2 MRKAVYTGSFDPITNGHMDIIIQALSFV--EDLVIAIGCNSVKTKGF--LSIQERSELIKQSIFHFIPDSSNRVSVI--- 74 (182)
Q Consensus 2 mkigifgGsFdPiH~GHL~ia~~a~~~~--D~vii~~~~~p~k~~~~--~s~e~r~~m~~~a~~~~~~~~~~~~~~~--- 74 (182)
+|||||||||||+|+||+.+|++|++.+ |+|++.++.++...... .....+..++...............+..
T Consensus 7 kkIaifgGSFdP~H~GH~~ii~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 86 (194)
T 1kam_A 7 KKIGIFGGTFDPPHNGHLLMANEVLYQAGLDEIWFMPNQIPPHKQNEDYTDSFHRVEMLKLAIQSNPSFKLELVEMEREG 86 (194)
T ss_dssp CEEEEEEECCSSCCHHHHHHHHHHHHHTTCSEEEEEECCCC---------CHHHHHHHHHHHHTTCTTEEECCGGGSTTC
T ss_pred CEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCC
T ss_conf 77999564758487999999999999859978999963566633342057999999987664227764200047876468
Q ss_pred -CCCCCC---CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHC----------CCCCEEEEECCCCCCCCCHHHHHH
Q ss_conf -033333---221001497079994376520124677998987647----------998689970685721132699999
Q gi|254780181|r 75 -SFEGLA---VNLAKDISAQVIVRGLRDMTDFDYEMRMTSVNRCLC----------PEIATIALFAKESSRYVTSTLIRH 140 (182)
Q Consensus 75 -~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----------~~~~~i~l~~~~~~~~ISST~IR~ 140 (182)
..+... ............+.+.+....+..+..+........ ..........+....+||||+||+
T Consensus 87 ~~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ISST~IR~ 166 (194)
T 1kam_A 87 PSYTFDTVSLLKQRYPNDQLFFIIGADMIEYLPKWYKLDELLNLIQFIGVKRPGFHVETPYPLLFADVPEFEVSSTMIRE 166 (194)
T ss_dssp CCSHHHHHHHHHHHSTTSEEEEEEETTTTTTCCCCHHHHHHHHHSEEEEEECSSCCCCCSSCCEEEECCCBCCCHHHHHH
T ss_pred CEEEHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCHHHHHH
T ss_conf 63645567789986488640000116678887624049999997157754375433000101001456556566799999
Q ss_pred HHHCCCCHHHCCCHHHHHHHHHHHHH
Q ss_conf 99859995583999999999999998
Q gi|254780181|r 141 LISIDADITSFVPDPVCVFLKNIVIS 166 (182)
Q Consensus 141 ~i~~g~~i~~lVP~~V~~yIk~~~~~ 166 (182)
+++.|++|++|||++|.+||++..+|
T Consensus 167 ~i~~~~~~~~~vP~~V~~yI~~~~LY 192 (194)
T 1kam_A 167 RFKSKKPTDYLIPDKVKKYVEENGLY 192 (194)
T ss_dssp HHHHTCCCTTTSCHHHHHHHHHTTCS
T ss_pred HHHCCCCCHHHCCHHHHHHHHHCCCC
T ss_conf 99839990374899999999983898