HHsearch results for GI: 254780181 and protein with PDBid: 1kqn_A
>1kqn_A Nmnat, nicotinamide mononucleotide adenylyl transferase; nucleotidyltransferase superfamily; HET: NAD; 2.20A {Homo sapiens} SCOP: c.26.1.3 PDB: 1kqo_A* 1kr2_A* 1kku_A 1gzu_A*
Probab=99.96 E-value=6.9e-30 Score=196.92 Aligned_cols=169 Identities=18% Similarity=0.174 Sum_probs=116.5
Q ss_pred EEEEECCCCCCCCHHHHHHHHHHHHH--------CCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEE
Q ss_conf 59996589987848999999999974--------8979996455888766578989999999997642013355441242
Q gi|254780181|r 3 RKAVYTGSFDPITNGHMDIIIQALSF--------VEDLVIAIGCNSVKTKGFLSIQERSELIKQSIFHFIPDSSNRVSVI 74 (182)
Q Consensus 3 kigifgGsFdPiH~GHL~ia~~a~~~--------~D~vii~~~~~p~k~~~~~s~e~r~~m~~~a~~~~~~~~~~~~~~~ 74 (182)
.|+||||||||||+|||.+|+.|++. +|++++.|+++|++++...|.++|++|+++|+........+..+..
T Consensus 9 ~vll~~GSFdP~H~GHl~ia~~a~~~l~~~~~~~l~~~~~~P~~~~~~K~~~~s~~~Rl~Ml~lA~~~~~~~~v~~~E~~ 88 (279)
T 1kqn_A 9 VVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKKGLIPAYHRVIMAELATKNSKWVEVDTWESL 88 (279)
T ss_dssp EEEEEEECCTTCCHHHHHHHHHHHHHHHHTSSEEEEEEEEEECCGGGCCTTCCCHHHHHHHHHHHTTTCSSEEECCTGGG
T ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECHHHHH
T ss_conf 89996245373429999999999999734256041579980589987688899999999999999844686797216861
Q ss_pred CC----CCCCCCC-------------------------------------------CCCCCCEEEEEECCCCCCHHHHHH
Q ss_conf 03----3333221-------------------------------------------001497079994376520124677
Q gi|254780181|r 75 SF----EGLAVNL-------------------------------------------AKDISAQVIVRGLRDMTDFDYEMR 107 (182)
Q Consensus 75 ~~----~~~~~~~-------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~ 107 (182)
.. +..+... ......++++.|.|....|..|..
T Consensus 89 ~~~~syt~~tL~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~fiiG~D~l~~~~~~~~ 168 (279)
T 1kqn_A 89 QKEWKETLKVLRHHQEKLEASDCDHQQNSPTLERPGRKRKWTETQDSSQKKSLEPKTKAVPKVKLLCGADLLESFAVPNL 168 (279)
T ss_dssp CSSCCCHHHHHHHHHHHHTC--------------------------------------CCCEEEEEEEHHHHHHTTSTTT
T ss_pred CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEEEEECCHHHHCCCCCC
T ss_conf 78886189999999998421221001255422333322344322201211012334588841899986253645424466
Q ss_pred H-----HHHHH----------------------HHCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCHHHCCCHHHHHHH
Q ss_conf 9-----98987----------------------64799868997068572113269999999859995583999999999
Q gi|254780181|r 108 M-----TSVNR----------------------CLCPEIATIALFAKESSRYVTSTLIRHLISIDADITSFVPDPVCVFL 160 (182)
Q Consensus 108 ~-----~~~~~----------------------~l~~~~~~i~l~~~~~~~~ISST~IR~~i~~g~~i~~lVP~~V~~yI 160 (182)
| ..+.. .+......+.+....+..+||||+||+++++|++|++|||++|.+||
T Consensus 169 wk~~~~e~il~~~~liV~~R~g~~~~~~~~~~~~l~~~~~~i~~i~~~~~~dISST~IR~~l~~g~~i~~lvp~~V~~YI 248 (279)
T 1kqn_A 169 WKSEDITQIVANYGLICVTRAGNDAQKFIYESDVLWKHRSNIHVVNEWIANDISSTKIRRALRRGQSIRYLVPDLVQEYI 248 (279)
T ss_dssp SCHHHHHHHHHHTCEEEEESCHHHHHHHHHTCHHHHHTGGGEEEEECCSCCCCCHHHHHHHHHTTCCCBTTBCHHHHHHH
T ss_pred CCCCCHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCHHHCCHHHHHHH
T ss_conf 65217999970085899968999868742008888645498799768886671899999999869993263899999999
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999865457
Q gi|254780181|r 161 KNIVISLVKYD 171 (182)
Q Consensus 161 k~~~~~~~k~~ 171 (182)
++..+|.....
T Consensus 249 ~~~~LY~~~~~ 259 (279)
T 1kqn_A 249 EKHNLYSSESE 259 (279)
T ss_dssp HHHTCCSHHHH
T ss_pred HHCCCCCCCCC
T ss_conf 98399999999