HHsearch results for GI: 254780181 and protein with PDBid: 1vlh_A
>1vlh_A Phosphopantetheine adenylyltransferase; TM0741, structural genomics, JCSG, protein structure initiative, PSI; HET: PNS; 2.20A {Thermotoga maritima} SCOP: c.26.1.3
Probab=100.00 E-value=8.1e-33 Score=214.35 Aligned_cols=156 Identities=37% Similarity=0.615 Sum_probs=122.7
Q ss_pred CEEEEECCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCC
Q ss_conf 65999658998784899999999997489799964558887665789899999999976420133554412420333332
Q gi|254780181|r 2 MRKAVYTGSFDPITNGHMDIIIQALSFVEDLVIAIGCNSVKTKGFLSIQERSELIKQSIFHFIPDSSNRVSVISFEGLAV 81 (182)
Q Consensus 2 mkigifgGsFdPiH~GHL~ia~~a~~~~D~vii~~~~~p~k~~~~~s~e~r~~m~~~a~~~~~~~~~~~~~~~~~~~~~~ 81 (182)
|| |||||||||||+|||.+|++|++++|+|+|+++.++++ ....+.+.|.+|++.......... .........
T Consensus 13 Mk-aifgGsFdPiH~GHl~i~~~a~~~~D~viv~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~ 85 (173)
T 1vlh_A 13 MK-AVYPGSFDPITLGHVDIIKRALSIFDELVVLVTENPRK-KCMFTLEERKKLIEEVLSDLDGVK-----VDVHHGLLV 85 (173)
T ss_dssp CE-EEEEECCTTCCHHHHHHHHHHHTTCSEEEEEEECCTTC-CCSSCHHHHHHHHHHHTTTCTTEE-----EEEECSCHH
T ss_pred CE-EEEEECCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCC-CCCCCHHHHHHHHHHHHCCCCEEE-----ECCCCCCCH
T ss_conf 26-99623478777999999999998699999950355567-877878899999986310221011-----001112101
Q ss_pred CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCHHHCCCHHHHHHHH
Q ss_conf 21001497079994376520124677998987647998689970685721132699999998599955839999999999
Q gi|254780181|r 82 NLAKDISAQVIVRGLRDMTDFDYEMRMTSVNRCLCPEIATIALFAKESSRYVTSTLIRHLISIDADITSFVPDPVCVFLK 161 (182)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~l~~~~~~~~ISST~IR~~i~~g~~i~~lVP~~V~~yIk 161 (182)
....................+....+...+....+++.+++++..++++.+||||+||++++.|+||++|||++|++||+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~i~l~~~~~~~~ISST~IR~~i~~g~~i~~lvP~~V~~yI~ 165 (173)
T 1vlh_A 86 DYLKKHGIKVLVRGLRAVTDYEYELQMALANKKLYSDLETVFLIASEKFSFISSSLVKEVALYGGDVTEWVPPEVARALN 165 (173)
T ss_dssp HHHHHHTCCEEEEEECTTSCHHHHHHHHHHHHHHSTTCEEEEEECCGGGTTCCHHHHHHHHHTTCCCTTTSCHHHHHHHH
T ss_pred HHHHHHCHHHEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEECHHHHHHHHHCCCCHHHHCCHHHHHHHH
T ss_conf 47764045551551367304788877999999867999677300576764045999999998499956848999999999
Q ss_pred HHH
Q ss_conf 999
Q gi|254780181|r 162 NIV 164 (182)
Q Consensus 162 ~~~ 164 (182)
|++
T Consensus 166 ek~ 168 (173)
T 1vlh_A 166 EKL 168 (173)
T ss_dssp HHT
T ss_pred HHH
T ss_conf 998