HHsearch results for GI: 254780181 and protein with PDBid: 3hl4_A
>3hl4_A Choline-phosphate cytidylyltransferase A; rossmann fold, phospholipid synthesis, phosphatidylcholine, phosphocholine, CTP, CDP-choline; HET: CDC; 2.20A {Rattus norvegicus}
Probab=98.81 E-value=5.6e-09 Score=72.35 Aligned_cols=129 Identities=12% Similarity=0.102 Sum_probs=74.7
Q ss_pred EEECCCCCCCCHHHHHHHHHHHHHC--CEEEEECCCCC----CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCC
Q ss_conf 9965899878489999999999748--97999645588----87665789899999999976420133554412420333
Q gi|254780181|r 5 AVYTGSFDPITNGHMDIIIQALSFV--EDLVIAIGCNS----VKTKGFLSIQERSELIKQSIFHFIPDSSNRVSVISFEG 78 (182)
Q Consensus 5 gifgGsFdPiH~GHL~ia~~a~~~~--D~vii~~~~~p----~k~~~~~s~e~r~~m~~~a~~~~~~~~~~~~~~~~~~~ 78 (182)
..--|+||++|.||+.+.++|.+++ |.|+|+..+.. .|..+..+.++|.+++.....-+. ........
T Consensus 79 Vyv~G~FDLfH~GHi~lL~~AK~l~~gd~LIVGV~sDe~i~k~Kg~pi~~~~eR~~~l~~~r~VD~------VI~~~p~~ 152 (236)
T 3hl4_A 79 VYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNENERYDAVQHCRYVDE------VVRNAPWT 152 (236)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHTSSSSEEEEEEECCHHHHHHHTCCCSSCHHHHHHHHHTBTTCSE------EESSCCSS
T ss_pred EEEECEECCCCHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHCCCCCCCCHHHHHHHHHHCCCCCC------CCCCCCCC
T ss_conf 999451588898999999999605998989999777899985699999999999998652145535------22489855
Q ss_pred CCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHCCC
Q ss_conf 33221001497079994376520124677998987647998689970685721132699999998599
Q gi|254780181|r 79 LAVNLAKDISAQVIVRGLRDMTDFDYEMRMTSVNRCLCPEIATIALFAKESSRYVTSTLIRHLISIDA 146 (182)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~l~~~~~~~~ISST~IR~~i~~g~ 146 (182)
............+.+.+.+.............+.. ....+.+ ... ..||||.|.++|.++.
T Consensus 153 ~~~~~l~~~~~d~vv~gdd~~~~~~~~~~~~~~k~----~g~~~~i-~rt--~giSTT~II~RI~~~~ 213 (236)
T 3hl4_A 153 LTPEFLAEHRIDFVAHDDIPYSSAGSDDVYKHIKE----AGMFAPT-QRT--EGISTSDIITRIVRDY 213 (236)
T ss_dssp CCHHHHHHTTCCEEEEESSCCCCSSCSCTTHHHHH----TTCEEEE-CCC--TTCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHH----CCEEEEE-CCC--CCCCHHHHHHHHHHHH
T ss_conf 62999987299789868964427771559999873----8999997-899--8823999999999879