HHsearch alignment for GI: 254780182 and conserved domain: PRK05560

>PRK05560 DNA gyrase subunit A; Validated.
Probab=100.00  E-value=0  Score=2463.11  Aligned_cols=814  Identities=55%  Similarity=0.922  Sum_probs=798.2

Q ss_pred             CCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHCCCCCCCH
Q ss_conf             43235666009999987678777998863137540008973678999999987899999811340425566436688704
Q gi|254780182|r   11 EEEKGITSVSITDEMQNSYLTYAINVILGRAIPDLRDGLKPVHRRILFGMMQMGVEWNKKYVKCARISGEVMGKYHPHGN   90 (910)
Q Consensus        11 ~~~~~i~~~~~~~~m~~syl~Ya~svI~~RAlPd~rDGlKpv~Rrily~m~~~~~~~~~~~~K~a~ivg~v~gkyHPHGd   90 (910)
T Consensus         4 ~~~~~i~~~~~~~~~~~~yl~Ya~svi~~RAlPdvrDGlKPv~RRily~M~~l~l~~~~~~~K~ArivG~v~gkyHPHGd   83 (822)
T PRK05560          4 ELADRIIPVNIEEEMKRSYLDYAMSVIVGRALPDVRDGLKPVHRRILYAMYELGLTPDKPYKKSARIVGDVMGKYHPHGD   83 (822)
T ss_pred             HHHCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCC
T ss_conf             03344445348999998899888999985128864468850899999999872899999974420664100547789882


Q ss_pred             HHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCEECCCC
Q ss_conf             78999999712201115613147887088776972013578999789999998630768405330689885485034322
Q gi|254780182|r   91 AAIYDALARMAQDWSLRLLLIEGQGNFGSVDGDPPAAERYTECRLQKAAHFLLDDLGKDTVDFRPNYDGSFQEPVVLCAR  170 (910)
Q Consensus        91 ~siy~a~v~maq~~~~r~plidg~GnfGs~dgd~~AA~RYte~rl~~~~~~~l~~i~~~tv~~~~n~D~~~~EP~vlP~~  170 (910)
T Consensus        84 ~siY~alvrmaQ~~~~r~plidg~GNfGsidgd~~AAmRYTE~rl~~~~~~ll~di~~~tV~f~~NfD~s~~EP~vLPa~  163 (822)
T PRK05560         84 SAVYDALVRMAQDFSLRYPLVDGQGNFGSIDGDPAAAMRYTEARLAKIAHELLRDIDKETVDFVPNYDGSEQEPTVLPAR  163 (822)
T ss_pred             HHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             17999999970022304732715788889999800666678888799999998511306525504889876586525656


Q ss_pred             CCCCHHCCCCCEEEHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEE
Q ss_conf             73211016761010133178985478999999887618776888888634586688744344758899998701203899
Q gi|254780182|r  171 YPNVLVNGGGGIAVGMATNIPTHNLGEVVDGCVAVIDNPDIDLDALMEIIRGPDFPTGAVILGRTGIKNAYATGRGSIVI  250 (910)
Q Consensus       171 ~P~lL~nG~~GIAvGmaTnippHNl~Ev~~a~~~~i~~p~~~~~eL~~~i~GPDFPTGG~I~~~~~i~~~y~tGrG~i~i  250 (910)
T Consensus       164 ~PnlLvNGs~GIAVGmATniPpHNL~Evi~a~~~~i~np~~t~~~L~~~i~GPDFPTGG~I~~~~~i~~~y~tGrG~i~i  243 (822)
T PRK05560        164 FPNLLVNGSSGIAVGMATNIPPHNLGEVIDACLALIDNPDITIEELMEIIPGPDFPTGGIILGRSGIREAYRTGRGSIIM  243 (822)
T ss_pred             CCHHHCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHCCCEEEE
T ss_conf             64532057751002110588996889999999986359999999994669899799982897848799999837670999


Q ss_pred             EEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHH
Q ss_conf             99886543367845999924644352899999999998716650144587303746557999947988778999999976
Q gi|254780182|r  251 RGVSHIEKTSGDREQIVVTEIPYQVNKAAMLEKIAELVREKRIVDIADLRDESDRQGYRVVIELKRGASADVILNQLYRY  330 (910)
Q Consensus       251 R~k~~ie~~~~~k~~ivItEiPY~vnk~~lie~Ia~lv~~~ki~gI~dirDeSdr~giRivielKr~~~~~~vln~Lyk~  330 (910)
T Consensus       244 R~k~~iE~~~~~r~~IvItEIPY~vnk~~liekIa~lv~~kki~gI~dirDESdr~GiRIVIelKr~~~~~~vln~Lyk~  323 (822)
T PRK05560        244 RAKAEIEEIRKGREAIIVTEIPYQVNKARLIEKIAELVKEKKIEGISDIRDESDRDGMRIVIELKRDAVPEVVLNNLYKH  323 (822)
T ss_pred             EEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHH
T ss_conf             88999998579953899996898577999999999998557544510300356877627999967989979999999860


Q ss_pred             CCHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
Q ss_conf             10110000002455416630002999999999999999999999999999888778999999874069999998618997
Q gi|254780182|r  331 TSLQSLFSVNMVALNGYKPERFTLIGILKAFVAFREEVVVRRTKYLLNKARDRAHVLVGLAIAVANLDEVVRIIRFSPNP  410 (910)
Q Consensus       331 T~Lq~sf~~N~~aL~~g~P~~l~Lk~iL~~fi~hR~evi~rRt~~~L~ka~~R~HILeGL~~Al~nIDeVI~iIR~S~d~  410 (910)
T Consensus       324 T~Lq~sf~~N~~al~~g~P~~l~Lk~~L~~fi~hR~~vi~rr~~~~L~ka~~RlhIleGl~~a~~~iDeVI~iIR~S~~~  403 (822)
T PRK05560        324 TQLQTSFGINMLALVDGQPKLLNLKQILEAFVDHRKEVITRRTRFELRKARERAHILEGLLIALDNIDEVIALIRASPTP  403 (822)
T ss_pred             CCHHHCCCCEEEEEECCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCH
T ss_conf             84132036117998799877864999999999999999999999999999988999988999995879999999718987


Q ss_pred             HHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             89878776312697889999974022111222344523699999999987899998887999999899999999988753
Q gi|254780182|r  411 ETARRELMQRSWNASDIKDLIDLIDDSSYTIGSDGTMYLSEVQTRAILELRLARLTGLGRDDIRNELNSLGIEIKECLDI  490 (910)
Q Consensus       411 ~eAk~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~lSe~QA~AILdMrL~rLt~LE~~kl~~E~~eL~~~I~~l~~I  490 (910)
T Consensus       404 ~~Ak~~L~~~--------------------------f~lse~QA~AIL~mrL~rLt~Le~~kl~~E~~eL~~~I~~l~~I  457 (822)
T PRK05560        404 AEAREGLMER--------------------------YGLSEIQAQAILDMRLQRLTGLEREKIEDEYKELLAEIADLLDI  457 (822)
T ss_pred             HHHHHHHHHH--------------------------HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             8999989887--------------------------58899999999998999987678999999999999999999988


Q ss_pred             HCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEECCCEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             04989999999998999998405688331001343453010145678189990797052331000002334565211000
Q gi|254780182|r  491 LSSRSRLLGIIKQELLSVKDELDTPRRTRIVEGLLDMEDEDCIVREDMVVTVSHLGYVKRVPLSVYRAQRRGGKGRSGVV  570 (910)
Q Consensus       491 L~s~~~l~~iI~~EL~eik~kygd~RRT~I~~~~~~i~~EdlI~~E~vvV~lS~~GyIKr~~~~~yr~Q~RggkG~~~~~  570 (910)
T Consensus       458 L~s~~~l~~iI~~EL~eik~kygd~RRT~I~~~~~ei~~EDLI~~E~vvVtlS~~GYIKR~~~~~yr~Q~RGGkG~~g~~  537 (822)
T PRK05560        458 LASPERLMEIIREELEEIKEKFGDPRRTEIEAGEGDIDDEDLIANEDVVVTLTHGGYIKRVPLDEYRAQRRGGKGKSGAG  537 (822)
T ss_pred             HCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHCCCCCCEEEEEECCCEEEEECHHHHHHHCCCCCCCCCCC
T ss_conf             65999999999999999999829988604415656562544177764699994682688613266553126777743430


Q ss_pred             CCCCCHHEEEEEECCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCEEEE
Q ss_conf             14641010113323777399995489399982000432244456554124545365562002566301256668717999
Q gi|254780182|r  571 MRDEDFVTDLFIVSTHTSVLFFSSLGFVYKEKVWRLPIGSPQARGKALINILSLNQGERITTIMPFPEDESSWNNLYVVF  650 (910)
Q Consensus       571 ~ke~D~v~~~~~~~t~d~LLfFTs~Gkvy~l~v~~IP~~sr~skG~pi~nll~l~~~E~I~ail~~~~~~~~~~~~~Lvl  650 (910)
T Consensus       538 ~ke~D~v~~~~~~~Thd~LLfFTn~Grvy~lkv~eIPe~sr~skG~~i~nll~l~~~EkI~ail~v~~~~---~~~~Lv~  614 (822)
T PRK05560        538 TKEDDFVEHLFVANTHDTLLFFTNRGRVYRLKVYELPEGSRTAKGRPIVNLLPLEPGEKITAILPVREFD---DDLYLFF  614 (822)
T ss_pred             CCCCCHHHHEEEECCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCCHHHHCCCCCCCEEEEEEECCCCC---CCCEEEE
T ss_conf             4556534432682478879999369949998916745668777884899716899997367877125678---8856999


Q ss_pred             EECCCCEEEECHHHHHHCCCCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCEEEEEEHHHCCCCCCCCCCCEEEEECC
Q ss_conf             94799189842368620477722786615898578889618982699993698599975876235478665535767528
Q gi|254780182|r  651 ATKHGNVRRNKLSDFIQINRSGKIAMKLDSRDEILSVETCTQENDILLTTKLGQCVRFPISAIRVFAGRNSVGVRGISLA  730 (910)
Q Consensus       651 ~Tk~G~VKkt~l~ef~~~r~~G~~aikLkegD~Li~v~~~~~~~~Iil~T~~G~~lrF~~~evr~~~GR~a~GVkgIkL~  730 (910)
T Consensus       615 ~Tk~G~IKRt~L~df~~~r~~G~~AikLke~DeLv~v~l~~~~~dIil~T~~G~alRF~~~eVR~~-GR~a~GVkgIkL~  693 (822)
T PRK05560        615 ATKNGTVKKTALSEFSNIRSNGLIAINLDEGDELIGVRLTDGDDDVLLFSANGKAIRFPEEDVRPM-GRTARGVRGIKLR  693 (822)
T ss_pred             EECCCCEEEECHHHCCCCCCCCEEEEECCCCCEEEEEEECCCCCEEEEEECCCEEEEEEHHHCCCC-CCCCCCCCCEECC
T ss_conf             957972797136872255525519998589977999998489987999978973999506657777-8877684315519


Q ss_pred             CCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEECCCCEE
Q ss_conf             99869998973366654200000122233333334555444444443332222232001110125686799997599345
Q gi|254780182|r  731 KGDQVISMAIVLHADADYDERICYMKHMSAQRRLISGDTEEITSLKNDSSVEGNISEERCQELKLKEQFILTVSEKGFGK  810 (910)
Q Consensus       731 ~~D~Vv~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~IL~vTe~G~GK  810 (910)
T Consensus       694 ~gD~VV~~~vv~~-----------------------------------------------------~~~iL~vTe~G~GK  720 (822)
T PRK05560        694 EGDEVVSMSVLRD-----------------------------------------------------EQFVLTVTENGYGK  720 (822)
T ss_pred             CCCEEEEEEEECC-----------------------------------------------------CCEEEEEECCCEEE
T ss_conf             9998999998579-----------------------------------------------------98799991898053


Q ss_pred             EEEHHHCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCEEEEECCCCE
Q ss_conf             30178848667577414887606777768689999728996499994599899999010554451568738898089987
Q gi|254780182|r  811 RTSSYDFRISNRSGKGIRATDVSKINEIGALVAVFPVNDNDQIILVSDKGTLIRVPVNEIRIASRATKGVVIFSTAKDER  890 (910)
Q Consensus       811 Rt~~~eyr~q~RGgkGv~~ik~~~~n~~g~lv~~~~V~~~DeIlliT~~G~iiR~~v~~I~~~gR~a~GV~i~~L~~~D~  890 (910)
T Consensus       721 Rt~~~eyr~~~RGgkGv~~ik~~~k--~G~lv~~~~V~~~deI~liT~~G~~iRi~v~~I~~~gR~t~GVrl~~L~~~d~  798 (822)
T PRK05560        721 RTPAEEYRLQGRGGKGVIAIKITER--NGKLVGAVPVDDDDEIMLITDAGKLIRTRVSEIRITGRNTQGVTLIRLDEGEK  798 (822)
T ss_pred             ECCHHHCCCCCCCCCCEEEEEECCC--CCCEEEEEECCCCCEEEEEECCCEEEEEEHHHCCCCCCCCCCEEEEECCCCCE
T ss_conf             0528883755778777588996488--88489999917998699992798799987100475675788708998599998


Q ss_pred             EEEEEEECCCCCCCCCCCC
Q ss_conf             9999983566555665557
Q gi|254780182|r  891 VVSVERIRESEIVDEAEST  909 (910)
Q Consensus       891 Vv~va~i~~~e~~de~e~~  909 (910)
T Consensus       799 v~~va~v~~~~~~~~e~~~  817 (822)
T PRK05560        799 VVSVARVAEEEEEEEEEGE  817 (822)
T ss_pred             EEEEEEECCCCCCCCCCCC
T ss_conf             9999980787665445544