HHsearch alignment for GI: 254780182 and conserved domain: PRK05560
>PRK05560 DNA gyrase subunit A; Validated.
Probab=100.00 E-value=0 Score=2463.11 Aligned_cols=814 Identities=55% Similarity=0.922 Sum_probs=798.2
Q ss_pred CCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHCCCCCCCH
Q ss_conf 43235666009999987678777998863137540008973678999999987899999811340425566436688704
Q gi|254780182|r 11 EEEKGITSVSITDEMQNSYLTYAINVILGRAIPDLRDGLKPVHRRILFGMMQMGVEWNKKYVKCARISGEVMGKYHPHGN 90 (910)
Q Consensus 11 ~~~~~i~~~~~~~~m~~syl~Ya~svI~~RAlPd~rDGlKpv~Rrily~m~~~~~~~~~~~~K~a~ivg~v~gkyHPHGd 90 (910)
T Consensus 4 ~~~~~i~~~~~~~~~~~~yl~Ya~svi~~RAlPdvrDGlKPv~RRily~M~~l~l~~~~~~~K~ArivG~v~gkyHPHGd 83 (822)
T PRK05560 4 ELADRIIPVNIEEEMKRSYLDYAMSVIVGRALPDVRDGLKPVHRRILYAMYELGLTPDKPYKKSARIVGDVMGKYHPHGD 83 (822)
T ss_pred HHHCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCC
T ss_conf 03344445348999998899888999985128864468850899999999872899999974420664100547789882
Q ss_pred HHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCEECCCC
Q ss_conf 78999999712201115613147887088776972013578999789999998630768405330689885485034322
Q gi|254780182|r 91 AAIYDALARMAQDWSLRLLLIEGQGNFGSVDGDPPAAERYTECRLQKAAHFLLDDLGKDTVDFRPNYDGSFQEPVVLCAR 170 (910)
Q Consensus 91 ~siy~a~v~maq~~~~r~plidg~GnfGs~dgd~~AA~RYte~rl~~~~~~~l~~i~~~tv~~~~n~D~~~~EP~vlP~~ 170 (910)
T Consensus 84 ~siY~alvrmaQ~~~~r~plidg~GNfGsidgd~~AAmRYTE~rl~~~~~~ll~di~~~tV~f~~NfD~s~~EP~vLPa~ 163 (822)
T PRK05560 84 SAVYDALVRMAQDFSLRYPLVDGQGNFGSIDGDPAAAMRYTEARLAKIAHELLRDIDKETVDFVPNYDGSEQEPTVLPAR 163 (822)
T ss_pred HHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 17999999970022304732715788889999800666678888799999998511306525504889876586525656
Q ss_pred CCCCHHCCCCCEEEHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEE
Q ss_conf 73211016761010133178985478999999887618776888888634586688744344758899998701203899
Q gi|254780182|r 171 YPNVLVNGGGGIAVGMATNIPTHNLGEVVDGCVAVIDNPDIDLDALMEIIRGPDFPTGAVILGRTGIKNAYATGRGSIVI 250 (910)
Q Consensus 171 ~P~lL~nG~~GIAvGmaTnippHNl~Ev~~a~~~~i~~p~~~~~eL~~~i~GPDFPTGG~I~~~~~i~~~y~tGrG~i~i 250 (910)
T Consensus 164 ~PnlLvNGs~GIAVGmATniPpHNL~Evi~a~~~~i~np~~t~~~L~~~i~GPDFPTGG~I~~~~~i~~~y~tGrG~i~i 243 (822)
T PRK05560 164 FPNLLVNGSSGIAVGMATNIPPHNLGEVIDACLALIDNPDITIEELMEIIPGPDFPTGGIILGRSGIREAYRTGRGSIIM 243 (822)
T ss_pred CCHHHCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHCCCEEEE
T ss_conf 64532057751002110588996889999999986359999999994669899799982897848799999837670999
Q ss_pred EEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHH
Q ss_conf 99886543367845999924644352899999999998716650144587303746557999947988778999999976
Q gi|254780182|r 251 RGVSHIEKTSGDREQIVVTEIPYQVNKAAMLEKIAELVREKRIVDIADLRDESDRQGYRVVIELKRGASADVILNQLYRY 330 (910)
Q Consensus 251 R~k~~ie~~~~~k~~ivItEiPY~vnk~~lie~Ia~lv~~~ki~gI~dirDeSdr~giRivielKr~~~~~~vln~Lyk~ 330 (910)
T Consensus 244 R~k~~iE~~~~~r~~IvItEIPY~vnk~~liekIa~lv~~kki~gI~dirDESdr~GiRIVIelKr~~~~~~vln~Lyk~ 323 (822)
T PRK05560 244 RAKAEIEEIRKGREAIIVTEIPYQVNKARLIEKIAELVKEKKIEGISDIRDESDRDGMRIVIELKRDAVPEVVLNNLYKH 323 (822)
T ss_pred EEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHH
T ss_conf 88999998579953899996898577999999999998557544510300356877627999967989979999999860
Q ss_pred CCHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
Q ss_conf 10110000002455416630002999999999999999999999999999888778999999874069999998618997
Q gi|254780182|r 331 TSLQSLFSVNMVALNGYKPERFTLIGILKAFVAFREEVVVRRTKYLLNKARDRAHVLVGLAIAVANLDEVVRIIRFSPNP 410 (910)
Q Consensus 331 T~Lq~sf~~N~~aL~~g~P~~l~Lk~iL~~fi~hR~evi~rRt~~~L~ka~~R~HILeGL~~Al~nIDeVI~iIR~S~d~ 410 (910)
T Consensus 324 T~Lq~sf~~N~~al~~g~P~~l~Lk~~L~~fi~hR~~vi~rr~~~~L~ka~~RlhIleGl~~a~~~iDeVI~iIR~S~~~ 403 (822)
T PRK05560 324 TQLQTSFGINMLALVDGQPKLLNLKQILEAFVDHRKEVITRRTRFELRKARERAHILEGLLIALDNIDEVIALIRASPTP 403 (822)
T ss_pred CCHHHCCCCEEEEEECCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCH
T ss_conf 84132036117998799877864999999999999999999999999999988999988999995879999999718987
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89878776312697889999974022111222344523699999999987899998887999999899999999988753
Q gi|254780182|r 411 ETARRELMQRSWNASDIKDLIDLIDDSSYTIGSDGTMYLSEVQTRAILELRLARLTGLGRDDIRNELNSLGIEIKECLDI 490 (910)
Q Consensus 411 ~eAk~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~lSe~QA~AILdMrL~rLt~LE~~kl~~E~~eL~~~I~~l~~I 490 (910)
T Consensus 404 ~~Ak~~L~~~--------------------------f~lse~QA~AIL~mrL~rLt~Le~~kl~~E~~eL~~~I~~l~~I 457 (822)
T PRK05560 404 AEAREGLMER--------------------------YGLSEIQAQAILDMRLQRLTGLEREKIEDEYKELLAEIADLLDI 457 (822)
T ss_pred HHHHHHHHHH--------------------------HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8999989887--------------------------58899999999998999987678999999999999999999988
Q ss_pred HCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEECCCEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 04989999999998999998405688331001343453010145678189990797052331000002334565211000
Q gi|254780182|r 491 LSSRSRLLGIIKQELLSVKDELDTPRRTRIVEGLLDMEDEDCIVREDMVVTVSHLGYVKRVPLSVYRAQRRGGKGRSGVV 570 (910)
Q Consensus 491 L~s~~~l~~iI~~EL~eik~kygd~RRT~I~~~~~~i~~EdlI~~E~vvV~lS~~GyIKr~~~~~yr~Q~RggkG~~~~~ 570 (910)
T Consensus 458 L~s~~~l~~iI~~EL~eik~kygd~RRT~I~~~~~ei~~EDLI~~E~vvVtlS~~GYIKR~~~~~yr~Q~RGGkG~~g~~ 537 (822)
T PRK05560 458 LASPERLMEIIREELEEIKEKFGDPRRTEIEAGEGDIDDEDLIANEDVVVTLTHGGYIKRVPLDEYRAQRRGGKGKSGAG 537 (822)
T ss_pred HCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHCCCCCCEEEEEECCCEEEEECHHHHHHHCCCCCCCCCCC
T ss_conf 65999999999999999999829988604415656562544177764699994682688613266553126777743430
Q ss_pred CCCCCHHEEEEEECCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCEEEE
Q ss_conf 14641010113323777399995489399982000432244456554124545365562002566301256668717999
Q gi|254780182|r 571 MRDEDFVTDLFIVSTHTSVLFFSSLGFVYKEKVWRLPIGSPQARGKALINILSLNQGERITTIMPFPEDESSWNNLYVVF 650 (910)
Q Consensus 571 ~ke~D~v~~~~~~~t~d~LLfFTs~Gkvy~l~v~~IP~~sr~skG~pi~nll~l~~~E~I~ail~~~~~~~~~~~~~Lvl 650 (910)
T Consensus 538 ~ke~D~v~~~~~~~Thd~LLfFTn~Grvy~lkv~eIPe~sr~skG~~i~nll~l~~~EkI~ail~v~~~~---~~~~Lv~ 614 (822)
T PRK05560 538 TKEDDFVEHLFVANTHDTLLFFTNRGRVYRLKVYELPEGSRTAKGRPIVNLLPLEPGEKITAILPVREFD---DDLYLFF 614 (822)
T ss_pred CCCCCHHHHEEEECCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCCHHHHCCCCCCCEEEEEEECCCCC---CCCEEEE
T ss_conf 4556534432682478879999369949998916745668777884899716899997367877125678---8856999
Q ss_pred EECCCCEEEECHHHHHHCCCCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCEEEEEEHHHCCCCCCCCCCCEEEEECC
Q ss_conf 94799189842368620477722786615898578889618982699993698599975876235478665535767528
Q gi|254780182|r 651 ATKHGNVRRNKLSDFIQINRSGKIAMKLDSRDEILSVETCTQENDILLTTKLGQCVRFPISAIRVFAGRNSVGVRGISLA 730 (910)
Q Consensus 651 ~Tk~G~VKkt~l~ef~~~r~~G~~aikLkegD~Li~v~~~~~~~~Iil~T~~G~~lrF~~~evr~~~GR~a~GVkgIkL~ 730 (910)
T Consensus 615 ~Tk~G~IKRt~L~df~~~r~~G~~AikLke~DeLv~v~l~~~~~dIil~T~~G~alRF~~~eVR~~-GR~a~GVkgIkL~ 693 (822)
T PRK05560 615 ATKNGTVKKTALSEFSNIRSNGLIAINLDEGDELIGVRLTDGDDDVLLFSANGKAIRFPEEDVRPM-GRTARGVRGIKLR 693 (822)
T ss_pred EECCCCEEEECHHHCCCCCCCCEEEEECCCCCEEEEEEECCCCCEEEEEECCCEEEEEEHHHCCCC-CCCCCCCCCEECC
T ss_conf 957972797136872255525519998589977999998489987999978973999506657777-8877684315519
Q ss_pred CCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEECCCCEE
Q ss_conf 99869998973366654200000122233333334555444444443332222232001110125686799997599345
Q gi|254780182|r 731 KGDQVISMAIVLHADADYDERICYMKHMSAQRRLISGDTEEITSLKNDSSVEGNISEERCQELKLKEQFILTVSEKGFGK 810 (910)
Q Consensus 731 ~~D~Vv~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~IL~vTe~G~GK 810 (910)
T Consensus 694 ~gD~VV~~~vv~~-----------------------------------------------------~~~iL~vTe~G~GK 720 (822)
T PRK05560 694 EGDEVVSMSVLRD-----------------------------------------------------EQFVLTVTENGYGK 720 (822)
T ss_pred CCCEEEEEEEECC-----------------------------------------------------CCEEEEEECCCEEE
T ss_conf 9998999998579-----------------------------------------------------98799991898053
Q ss_pred EEEHHHCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCEEEEECCCCE
Q ss_conf 30178848667577414887606777768689999728996499994599899999010554451568738898089987
Q gi|254780182|r 811 RTSSYDFRISNRSGKGIRATDVSKINEIGALVAVFPVNDNDQIILVSDKGTLIRVPVNEIRIASRATKGVVIFSTAKDER 890 (910)
Q Consensus 811 Rt~~~eyr~q~RGgkGv~~ik~~~~n~~g~lv~~~~V~~~DeIlliT~~G~iiR~~v~~I~~~gR~a~GV~i~~L~~~D~ 890 (910)
T Consensus 721 Rt~~~eyr~~~RGgkGv~~ik~~~k--~G~lv~~~~V~~~deI~liT~~G~~iRi~v~~I~~~gR~t~GVrl~~L~~~d~ 798 (822)
T PRK05560 721 RTPAEEYRLQGRGGKGVIAIKITER--NGKLVGAVPVDDDDEIMLITDAGKLIRTRVSEIRITGRNTQGVTLIRLDEGEK 798 (822)
T ss_pred ECCHHHCCCCCCCCCCEEEEEECCC--CCCEEEEEECCCCCEEEEEECCCEEEEEEHHHCCCCCCCCCCEEEEECCCCCE
T ss_conf 0528883755778777588996488--88489999917998699992798799987100475675788708998599998
Q ss_pred EEEEEEECCCCCCCCCCCC
Q ss_conf 9999983566555665557
Q gi|254780182|r 891 VVSVERIRESEIVDEAEST 909 (910)
Q Consensus 891 Vv~va~i~~~e~~de~e~~ 909 (910)
T Consensus 799 v~~va~v~~~~~~~~e~~~ 817 (822)
T PRK05560 799 VVSVARVAEEEEEEEEEGE 817 (822)
T ss_pred EEEEEEECCCCCCCCCCCC
T ss_conf 9999980787665445544