HHsearch alignment for GI: 254780182 and conserved domain: PRK09631
>PRK09631 DNA topoisomerase IV subunit A; Provisional.
Probab=98.06 E-value=0.0034 Score=47.68 Aligned_cols=68 Identities=22% Similarity=0.173 Sum_probs=39.6
Q ss_pred CCCCEEEECHHHHHH--CCCCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCEEEEEEHHHCCCCCCCCCCCEE
Q ss_conf 799189842368620--4777227866158985788896189826999936985999758762354786655357
Q gi|254780182|r 653 KHGNVRRNKLSDFIQ--INRSGKIAMKLDSRDEILSVETCTQENDILLTTKLGQCVRFPISAIRVFAGRNSVGVR 725 (910)
Q Consensus 653 k~G~VKkt~l~ef~~--~r~~G~~aikLkegD~Li~v~~~~~~~~Iil~T~~G~~lrF~~~evr~~~GR~a~GVk 725 (910)
T Consensus 458 d~i~aKrVa~~n~Kly~nr~~GFiGtslKkdDfV~~---CSd~DdILvF~-dG~ykV~kV~~K-~Fvgk~i~~v~ 527 (626)
T PRK09631 458 KSKNVREIATKNMKVYLNLETGFVGTSLIDGEFIGN---ASYYDKILIFK-DGSYVLKNIEDK-TFIDKKNVCVL 527 (626)
T ss_pred CCEEEEEEECCCCEEEECCCCCEEEECCCCCCEEEE---CCCCCEEEEEE-CCEEEEEECCCC-CEECCCCEEEE
T ss_conf 444369957023325665888556103567845673---35665399998-985999985776-05468837999