HHsearch results for GI: 254780182 and protein with PDBid: 1zvt_A
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA binding, DNA topology; 1.70A {Escherichia coli}
Probab=100.00 E-value=2.3e-34 Score=324.68 Aligned_cols=189 Identities=19% Similarity=0.316 Sum_probs=161.3
Q ss_pred CCEEEEEECCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEEEECCCCEEEEEECCCCEEEEECCCCCCCCCCCCC
Q ss_conf 78189990797052331000002334565211000146410101133237773999954893999820004322444565
Q gi|254780182|r 536 EDMVVTVSHLGYVKRVPLSVYRAQRRGGKGRSGVVMRDEDFVTDLFIVSTHTSVLFFSSLGFVYKEKVWRLPIGSPQARG 615 (910)
Q Consensus 536 E~vvV~lS~~GyIKr~~~~~yr~Q~RggkG~~~~~~ke~D~v~~~~~~~t~d~LLfFTs~Gkvy~l~v~~IP~~sr~skG 615 (910)
|||+|+||++||||+. +..+...+++++|++|++.+++.|+|||+||||||.|++|++++|+||+++|++
T Consensus 2 E~vtV~lS~~G~Ir~~--------kg~~~~~~~~~~Ke~D~~~~~~~~~t~d~ll~FTn~G~~y~~~v~~ip~~~~~~-- 71 (256)
T 1zvt_A 2 EPVTIVLSQMGWVRSA--------KGHDIDAPGLNYKAGDSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQG-- 71 (256)
T ss_dssp CEEEEEEETTSEEEEE--------ESSCCCSTTSCCCTTCCEEEEEEEETTSCEEEEETTSEEEEECGGGSCCSSSCC--
T ss_pred CCEEEEECCCCEEEEE--------CCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCEEEEEECCCCCCCCCCC--
T ss_conf 8979999289738800--------488888121745788811699998589889999489879999760041112456--
Q ss_pred CCCEEEEECCCCCCEEEEEEECCCCCCCCCCEEEEEECCCCEEEECHHHHHHCCCCCEEEEEECCCCEEEEEEECC-CCC
Q ss_conf 5412454536556200256630125666871799994799189842368620477722786615898578889618-982
Q gi|254780182|r 616 KALINILSLNQGERITTIMPFPEDESSWNNLYVVFATKHGNVRRNKLSDFIQINRSGKIAMKLDSRDEILSVETCT-QEN 694 (910)
Q Consensus 616 ~pi~nll~l~~~E~I~ail~~~~~~~~~~~~~Lvl~Tk~G~VKkt~l~ef~~~r~~G~~aikLkegD~Li~v~~~~-~~~ 694 (910)
+|+.+++.++.++.++.+..+ .++.|++|+|++|++||+++++|.+.+++|+.+|+|+++|+++.+..+. +++
T Consensus 72 ~~~~~~~~~~~~~~~i~~~~~------~~~~~ll~~T~~G~ikr~~l~~~~~~~~~Gk~~~~l~~~d~~i~~~~v~~~~~ 145 (256)
T 1zvt_A 72 EPLTGKLTLPPGATVDHMLME------SDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPENAHVMPPVVIEDASD 145 (256)
T ss_dssp EEGGGTCCCCTTCCEEEEECC------CTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCTTCCBCCCEECCCTTC
T ss_pred CCCCCCCCCCCCCCEEEEEEE------CCCCEEEEEECCCEEEEEEHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCE
T ss_conf 784443434445531345540------68842999968977999872550050235750022577883255599648854
Q ss_pred EEEEEECCCEEEEEEHHHCCCCCCCCCCCEEEEECCC------CCEEEEEEEEC
Q ss_conf 6999936985999758762354786655357675289------98699989733
Q gi|254780182|r 695 DILLTTKLGQCVRFPISAIRVFAGRNSVGVRGISLAK------GDQVISMAIVL 742 (910)
Q Consensus 695 ~Iil~T~~G~~lrF~~~evr~~~GR~a~GVkgIkL~~------~D~Vv~~~vi~ 742 (910)
+|+++|++|++|||+.+++|.| +| ++||++|+|++ +|.|+++.++.
T Consensus 146 ~i~l~t~~G~~l~f~~~ev~~~-~r-g~Gv~~~~l~~~~~~~~dd~v~~~~v~~ 197 (256)
T 1zvt_A 146 MLLAITQAGRMLMFPVSDLPQL-SK-GKGNKIINIPSAEAARGEDGLAQLYVLP 197 (256)
T ss_dssp EEEEEETTSEEEEEEGGGSCBC-SS-BSCEESSCCCHHHHHTTSSCEEEEEEEC
T ss_pred EEEEECCCCCEEEEEHHHCCCC-CC-CCCCCCEEECCCCCCCCCCEEEEEEEEC
T ss_conf 9999868992898566884424-58-8884247106422456774799988858