HHsearch results for GI: 254780182 and protein with PDBid: 1zvt_A

>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA binding, DNA topology; 1.70A {Escherichia coli}
Probab=99.76  E-value=4.4e-17  Score=169.96  Aligned_cols=188  Identities=16%  Similarity=0.295  Sum_probs=147.5

Q ss_pred             EEEEECCCCEEEECHHHHHHCCCCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCEEEEEEHHHCCCCCCCCCCCEEE-
Q ss_conf             9999479918984236862047772278661589857888961898269999369859997587623547866553576-
Q gi|254780182|r  648 VVFATKHGNVRRNKLSDFIQINRSGKIAMKLDSRDEILSVETCTQENDILLTTKLGQCVRFPISAIRVFAGRNSVGVRG-  726 (910)
Q Consensus       648 Lvl~Tk~G~VKkt~l~ef~~~r~~G~~aikLkegD~Li~v~~~~~~~~Iil~T~~G~~lrF~~~evr~~~GR~a~GVkg-  726 (910)
                      .|++|++|+||+..-..   .   ....+++++||.+..+..|+..++++++|+.|++..++..+++.. .+.+.|+.. 
T Consensus         5 tV~lS~~G~Ir~~kg~~---~---~~~~~~~Ke~D~~~~~~~~~t~d~ll~FTn~G~~y~~~v~~ip~~-~~~~~~~~~~   77 (256)
T 1zvt_A            5 TIVLSQMGWVRSAKGHD---I---DAPGLNYKAGDSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSA-RGQGEPLTGK   77 (256)
T ss_dssp             EEEEETTSEEEEEESSC---C---CSTTSCCCTTCCEEEEEEEETTSCEEEEETTSEEEEECGGGSCCS-SSCCEEGGGT
T ss_pred             EEEECCCCEEEEECCCC---C---CCCCCCCCCCCEEEEEEEECCCCEEEEEECCCEEEEEECCCCCCC-CCCCCCCCCC
T ss_conf             99992897388004888---8---812174578881169999858988999948987999976004111-2456784443


Q ss_pred             EECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEECC
Q ss_conf             75289986999897336665420000012223333333455544444444333222223200111012568679999759
Q gi|254780182|r  727 ISLAKGDQVISMAIVLHADADYDERICYMKHMSAQRRLISGDTEEITSLKNDSSVEGNISEERCQELKLKEQFILTVSEK  806 (910)
Q Consensus       727 IkL~~~D~Vv~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~IL~vTe~  806 (910)
                      ..+..++.++++...                                                     .++.++|++|++
T Consensus        78 ~~~~~~~~~i~~~~~-----------------------------------------------------~~~~~ll~~T~~  104 (256)
T 1zvt_A           78 LTLPPGATVDHMLME-----------------------------------------------------SDDQKLLMASDA  104 (256)
T ss_dssp             CCCCTTCCEEEEECC-----------------------------------------------------CTTCEEEEEBTT
T ss_pred             CCCCCCCCEEEEEEE-----------------------------------------------------CCCCEEEEEECC
T ss_conf             434445531345540-----------------------------------------------------688429999689


Q ss_pred             CCEEEEEHHHCCCCCCCCCCEEEEECCCCCCCCCEEEEEEC-CCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCEEEEE
Q ss_conf             93453017884866757741488760677776868999972-89964999945998999990105544515687388980
Q gi|254780182|r  807 GFGKRTSSYDFRISNRSGKGIRATDVSKINEIGALVAVFPV-NDNDQIILVSDKGTLIRVPVNEIRIASRATKGVVIFST  885 (910)
Q Consensus       807 G~GKRt~~~eyr~q~RGgkGv~~ik~~~~n~~g~lv~~~~V-~~~DeIlliT~~G~iiR~~v~~I~~~gR~a~GV~i~~L  885 (910)
                      ||+|||++++|..++|+|+..  |++.+.   +.++.+..+ ..+++|+++|++|+++|++++++|+++| ++||++|++
T Consensus       105 G~ikr~~l~~~~~~~~~Gk~~--~~l~~~---d~~i~~~~v~~~~~~i~l~t~~G~~l~f~~~ev~~~~r-g~Gv~~~~l  178 (256)
T 1zvt_A          105 GYGFVCTFNDLVARNRAGKAL--ITLPEN---AHVMPPVVIEDASDMLLAITQAGRMLMFPVSDLPQLSK-GKGNKIINI  178 (256)
T ss_dssp             SEEEEEEGGGGCCCSTTCEEC--BCCCTT---CCBCCCEECCCTTCEEEEEETTSEEEEEEGGGSCBCSS-BSCEESSCC
T ss_pred             CEEEEEEHHHHCCCCCCCCCC--CCCCCC---CCEEEEEEECCCCEEEEEECCCCCEEEEEHHHCCCCCC-CCCCCCEEE
T ss_conf             779998725500502357500--225778---83255599648854999986899289856688442458-888424710


Q ss_pred             CC------CCEEEEEEEECCCC
Q ss_conf             89------98799999835665
Q gi|254780182|r  886 AK------DERVVSVERIRESE  901 (910)
Q Consensus       886 ~~------~D~Vv~va~i~~~e  901 (910)
                      .+      +|.|+.+..+++++
T Consensus       179 ~~~~~~~~dd~v~~~~v~~~~~  200 (256)
T 1zvt_A          179 PSAEAARGEDGLAQLYVLPPQS  200 (256)
T ss_dssp             CHHHHHTTSSCEEEEEEEC-CC
T ss_pred             CCCCCCCCCCEEEEEEEECCCC
T ss_conf             6422456774799988858997