HHsearch results for GI: 254780182 and protein with PDBid: 1zvt_A
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA binding, DNA topology; 1.70A {Escherichia coli}
Probab=99.76 E-value=4.4e-17 Score=169.96 Aligned_cols=188 Identities=16% Similarity=0.295 Sum_probs=147.5
Q ss_pred EEEEECCCCEEEECHHHHHHCCCCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCEEEEEEHHHCCCCCCCCCCCEEE-
Q ss_conf 9999479918984236862047772278661589857888961898269999369859997587623547866553576-
Q gi|254780182|r 648 VVFATKHGNVRRNKLSDFIQINRSGKIAMKLDSRDEILSVETCTQENDILLTTKLGQCVRFPISAIRVFAGRNSVGVRG- 726 (910)
Q Consensus 648 Lvl~Tk~G~VKkt~l~ef~~~r~~G~~aikLkegD~Li~v~~~~~~~~Iil~T~~G~~lrF~~~evr~~~GR~a~GVkg- 726 (910)
.|++|++|+||+..-.. . ....+++++||.+..+..|+..++++++|+.|++..++..+++.. .+.+.|+..
T Consensus 5 tV~lS~~G~Ir~~kg~~---~---~~~~~~~Ke~D~~~~~~~~~t~d~ll~FTn~G~~y~~~v~~ip~~-~~~~~~~~~~ 77 (256)
T 1zvt_A 5 TIVLSQMGWVRSAKGHD---I---DAPGLNYKAGDSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSA-RGQGEPLTGK 77 (256)
T ss_dssp EEEEETTSEEEEEESSC---C---CSTTSCCCTTCCEEEEEEEETTSCEEEEETTSEEEEECGGGSCCS-SSCCEEGGGT
T ss_pred EEEECCCCEEEEECCCC---C---CCCCCCCCCCCEEEEEEEECCCCEEEEEECCCEEEEEECCCCCCC-CCCCCCCCCC
T ss_conf 99992897388004888---8---812174578881169999858988999948987999976004111-2456784443
Q ss_pred EECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEECC
Q ss_conf 75289986999897336665420000012223333333455544444444333222223200111012568679999759
Q gi|254780182|r 727 ISLAKGDQVISMAIVLHADADYDERICYMKHMSAQRRLISGDTEEITSLKNDSSVEGNISEERCQELKLKEQFILTVSEK 806 (910)
Q Consensus 727 IkL~~~D~Vv~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~IL~vTe~ 806 (910)
..+..++.++++... .++.++|++|++
T Consensus 78 ~~~~~~~~~i~~~~~-----------------------------------------------------~~~~~ll~~T~~ 104 (256)
T 1zvt_A 78 LTLPPGATVDHMLME-----------------------------------------------------SDDQKLLMASDA 104 (256)
T ss_dssp CCCCTTCCEEEEECC-----------------------------------------------------CTTCEEEEEBTT
T ss_pred CCCCCCCCEEEEEEE-----------------------------------------------------CCCCEEEEEECC
T ss_conf 434445531345540-----------------------------------------------------688429999689
Q ss_pred CCEEEEEHHHCCCCCCCCCCEEEEECCCCCCCCCEEEEEEC-CCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCEEEEE
Q ss_conf 93453017884866757741488760677776868999972-89964999945998999990105544515687388980
Q gi|254780182|r 807 GFGKRTSSYDFRISNRSGKGIRATDVSKINEIGALVAVFPV-NDNDQIILVSDKGTLIRVPVNEIRIASRATKGVVIFST 885 (910)
Q Consensus 807 G~GKRt~~~eyr~q~RGgkGv~~ik~~~~n~~g~lv~~~~V-~~~DeIlliT~~G~iiR~~v~~I~~~gR~a~GV~i~~L 885 (910)
||+|||++++|..++|+|+.. |++.+. +.++.+..+ ..+++|+++|++|+++|++++++|+++| ++||++|++
T Consensus 105 G~ikr~~l~~~~~~~~~Gk~~--~~l~~~---d~~i~~~~v~~~~~~i~l~t~~G~~l~f~~~ev~~~~r-g~Gv~~~~l 178 (256)
T 1zvt_A 105 GYGFVCTFNDLVARNRAGKAL--ITLPEN---AHVMPPVVIEDASDMLLAITQAGRMLMFPVSDLPQLSK-GKGNKIINI 178 (256)
T ss_dssp SEEEEEEGGGGCCCSTTCEEC--BCCCTT---CCBCCCEECCCTTCEEEEEETTSEEEEEEGGGSCBCSS-BSCEESSCC
T ss_pred CEEEEEEHHHHCCCCCCCCCC--CCCCCC---CCEEEEEEECCCCEEEEEECCCCCEEEEEHHHCCCCCC-CCCCCCEEE
T ss_conf 779998725500502357500--225778---83255599648854999986899289856688442458-888424710
Q ss_pred CC------CCEEEEEEEECCCC
Q ss_conf 89------98799999835665
Q gi|254780182|r 886 AK------DERVVSVERIRESE 901 (910)
Q Consensus 886 ~~------~D~Vv~va~i~~~e 901 (910)
.+ +|.|+.+..+++++
T Consensus 179 ~~~~~~~~dd~v~~~~v~~~~~ 200 (256)
T 1zvt_A 179 PSAEAARGEDGLAQLYVLPPQS 200 (256)
T ss_dssp CHHHHHTTSSCEEEEEEEC-CC
T ss_pred CCCCCCCCCCEEEEEEEECCCC
T ss_conf 6422456774799988858997