HHsearch results for GI: 254780182 and protein with PDBid: 2wl2_A
>2wl2_A GYRA, DNA gyrase subunit A; isomerase, aminocoumarin antibiotic, drug target, protein-ligand complex; HET: DNA SM8; 2.62A {Escherichia coli} PDB: 1ab4_A 1x75_A*
Probab=100.00 E-value=0 Score=1319.96 Aligned_cols=510 Identities=53% Similarity=0.877 Sum_probs=493.6
Q ss_pred CCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHCCCCCCCHHH
Q ss_conf 23566600999998767877799886313754000897367899999998789999981134042556643668870478
Q gi|254780182|r 13 EKGITSVSITDEMQNSYLTYAINVILGRAIPDLRDGLKPVHRRILFGMMQMGVEWNKKYVKCARISGEVMGKYHPHGNAA 92 (910)
Q Consensus 13 ~~~i~~~~~~~~m~~syl~Ya~svI~~RAlPd~rDGlKpv~Rrily~m~~~~~~~~~~~~K~a~ivg~v~gkyHPHGd~s 92 (910)
.++|++++|+++|++|||+||||||++|||||+|||||||||||||||++++++++++|+|||++||+|||+||||||+|
T Consensus 4 ~~~~~~~~~~~~~~~~~l~Ya~~vi~~RaiP~~~DGlKP~qRkil~~~~~~~l~~~~~~~K~a~l~G~v~~~yHpHGe~s 83 (522)
T 2wl2_A 4 AREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDSA 83 (522)
T ss_dssp ------------------CHHHHHHHHHHCCBTTTCCCHHHHHHHHHHHHTTCCTTSCCEEHHHHHHHHHHHTCCSSCTH
T ss_pred CCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHCCCCCCHHH
T ss_conf 33454612899999999999999998513786224884889899999986278889884253102998874368886899
Q ss_pred HHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCEECCCCCC
Q ss_conf 99999971220111561314788708877697201357899978999999863076840533068988548503432273
Q gi|254780182|r 93 IYDALARMAQDWSLRLLLIEGQGNFGSVDGDPPAAERYTECRLQKAAHFLLDDLGKDTVDFRPNYDGSFQEPVVLCARYP 172 (910)
Q Consensus 93 iy~a~v~maq~~~~r~plidg~GnfGs~dgd~~AA~RYte~rl~~~~~~~l~~i~~~tv~~~~n~D~~~~EP~vlP~~~P 172 (910)
+|+|||||||+||+|+||++|||||||++||+||||||||||||++|..||.++|+++|+|+|||||+..||.|||+.||
T Consensus 84 l~~tiv~maQ~fs~n~~l~~~qg~fgs~~g~~~Aa~RYi~trLs~~~~~l~~~~d~~~l~~~~n~Dg~~~EP~~~pp~iP 163 (522)
T 2wl2_A 84 VYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIP 163 (522)
T ss_dssp HHHHHHHTTCTTTCSSCSEEEESCBCCTTCCCBCCTTTCEEEECHHHHHHTTTTTSSCSCEEECTTSSSEEESSCCCSSC
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCC
T ss_conf 99999999664020470315889999999986432306888887999999862322543767388986316704513574
Q ss_pred CCHHCCCCCEEEHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEE
Q ss_conf 21101676101013317898547899999988761877688888863458668874434475889999870120389999
Q gi|254780182|r 173 NVLVNGGGGIAVGMATNIPTHNLGEVVDGCVAVIDNPDIDLDALMEIIRGPDFPTGAVILGRTGIKNAYATGRGSIVIRG 252 (910)
Q Consensus 173 ~lL~nG~~GIAvGmaTnippHNl~Ev~~a~~~~i~~p~~~~~eL~~~i~GPDFPTGG~I~~~~~i~~~y~tGrG~i~iR~ 252 (910)
+||||||+||||||||||||||++|||+||+++|++|++++++||++||||||||||.+.|..|+.++|.||+|+|++||
T Consensus 164 ~vLvNGa~GIgtG~sT~IP~hNp~evi~~~~~~i~~~~~~~~~l~~~i~gPdfP~g~~~~g~~~~~~~~~~G~g~~~~r~ 243 (522)
T 2wl2_A 164 NLLVNGSSGIAVGMATNIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKVYIRA 243 (522)
T ss_dssp HHHHHCEECTTTTCCCEECCCCHHHHHHHHHHHHHCTTCCHHHHHHHCCSCCCTTCCEECCSHHHHHHHHHSEEEEEEEC
T ss_pred HHHHCCCCCEEHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCEECCCCHHHHHHHCCCEEEEEEE
T ss_conf 89865786321343316899998999999999852765217889851889988876620176107888637970799998
Q ss_pred EEEEEEC-CCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHC
Q ss_conf 8865433-678459999246443528999999999987166501445873037465579999479887789999999761
Q gi|254780182|r 253 VSHIEKT-SGDREQIVVTEIPYQVNKAAMLEKIAELVREKRIVDIADLRDESDRQGYRVVIELKRGASADVILNQLYRYT 331 (910)
Q Consensus 253 k~~ie~~-~~~k~~ivItEiPY~vnk~~lie~Ia~lv~~~ki~gI~dirDeSdr~giRivielKr~~~~~~vln~Lyk~T 331 (910)
+|++|.. +.|+++|+||||||++++++++|+|++++++||+++|+|+||+||++|+|+||++|++++++.++++|||+|
T Consensus 244 ~~~ie~~~~~~~~~i~ITELP~~~~t~~~~e~i~~lv~~kki~~i~d~~d~s~~~~vr~vI~lk~~~~~~~~~~~L~k~t 323 (522)
T 2wl2_A 244 RAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDGMRIVIEVKRDAVGEVVLNNLYSQT 323 (522)
T ss_dssp EEEEEECTTTCCEEEEEEECCTTCCHHHHHHHHHHHHHTTSSCSEEEEEECCCSSCCCEEEEECTTSCHHHHHHHHHTTS
T ss_pred EEEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 89998314588547999826985779999999999997599775410113578876089996787678899999998643
Q ss_pred CHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
Q ss_conf 01100000024554166300029999999999999999999999999998887789999998740699999986189978
Q gi|254780182|r 332 SLQSLFSVNMVALNGYKPERFTLIGILKAFVAFREEVVVRRTKYLLNKARDRAHVLVGLAIAVANLDEVVRIIRFSPNPE 411 (910)
Q Consensus 332 ~Lq~sf~~N~~aL~~g~P~~l~Lk~iL~~fi~hR~evi~rRt~~~L~ka~~R~HILeGL~~Al~nIDeVI~iIR~S~d~~ 411 (910)
+||+||++||+++++|+|++++|++||++|++||.++++||++|+|+|+++|+|+|+|+++|+.+||++|++||+|++++
T Consensus 324 kL~ts~s~n~~~l~d~~pk~~sl~eIL~~f~~~R~e~~~kR~~~~L~kl~~rl~il~~~~~~i~~Id~ii~iir~sk~~~ 403 (522)
T 2wl2_A 324 QLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRREVVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPA 403 (522)
T ss_dssp TTEEEEEEECEEEETTEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHCSSHH
T ss_pred HHHHCCCCEEEEEECCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
T ss_conf 27620230389986896258329999999999999999999999999999999887608999983478899987068769
Q ss_pred HHHHHHHHHCCCHHHHHHHHHHCCCCCCCCC--------CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9878776312697889999974022111222--------34452369999999998789999888799999989999999
Q gi|254780182|r 412 TARRELMQRSWNASDIKDLIDLIDDSSYTIG--------SDGTMYLSEVQTRAILELRLARLTGLGRDDIRNELNSLGIE 483 (910)
Q Consensus 412 eAk~~L~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~f~lSe~QA~AILdMrL~rLt~LE~~kl~~E~~eL~~~ 483 (910)
+|+..|+++.|.................... ....|.||+.||+|||+|||+|||++|++||++|+++|.++
T Consensus 404 ~ak~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LSe~QadyIL~M~L~~LT~~e~~KL~~E~~~l~~e 483 (522)
T 2wl2_A 404 EAKTALVANPWQLGNVAAMLERAGDDAARPEWLEPEFGVRDGLYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKELLDQ 483 (522)
T ss_dssp HHHHHHHHSCEECTTTHHHHC----CCCSCTTCCTTSEESSSEEECCHHHHHHHHHCBGGGGSTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99998764013430099999872242114310120005556765579999999996499997676599999999999999
Q ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEC
Q ss_conf 998875304989999999998999998405688331001
Q gi|254780182|r 484 IKECLDILSSRSRLLGIIKQELLSVKDELDTPRRTRIVE 522 (910)
Q Consensus 484 I~~l~~IL~s~~~l~~iI~~EL~eik~kygd~RRT~I~~ 522 (910)
+++|++||+|++.+|++|++||.+++++||++|||+|..
T Consensus 484 i~eL~~iL~s~~~l~~~i~~EL~elk~ky~~~RrT~I~a 522 (522)
T 2wl2_A 484 IAELLRILGSADRLMEVIREELELVREQFGDKRRTEITA 522 (522)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHHHHHCCCCCSEEC-
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 999999968999999999999999999828987886149