HHsearch results for GI: 254780182 and protein with PDBid: 2xcs_B
>2xcs_B DNA gyrase subunit B, DNA gyrase subunit A; isomerase, type IIA topoisomerase; HET: DNA 5UA RXV; 2.10A {Staphylococcus aureus} PDB: 2xcr_B* 2xcq_A* 2xco_A*
Probab=100.00 E-value=0 Score=1178.69 Aligned_cols=488 Identities=53% Similarity=0.843 Sum_probs=479.9
Q ss_pred CCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHCCCCCC
Q ss_conf 76432356660099999876787779988631375400089736789999999878999998113404255664366887
Q gi|254780182|r 9 DEEEEKGITSVSITDEMQNSYLTYAINVILGRAIPDLRDGLKPVHRRILFGMMQMGVEWNKKYVKCARISGEVMGKYHPH 88 (910)
Q Consensus 9 ~~~~~~~i~~~~~~~~m~~syl~Ya~svI~~RAlPd~rDGlKpv~Rrily~m~~~~~~~~~~~~K~a~ivg~v~gkyHPH 88 (910)
..-.+.++...+++++|.++|++||||||.+|||||++||||||||||||||+++++.++++|+|||++||+|+|+||||
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Raip~~~DGlKp~qRkil~~~~~~~~~~~~~~~k~a~~~g~v~~~~~~H 282 (692)
T 2xcs_B 203 AELPQSRINERNITSEMRESFLDYAMSVIVARALPDVRDGLKPVHRRILYGLNEQGMTPDKSYKKSARIVGDVMGKYHPH 282 (692)
T ss_dssp ---------EEEHHHHHHHHHHHHHHHHHHHTSSCBTTTCCCHHHHHHHHHHHHTTCCTTSCCEEHHHHHHHHHHHTCCS
T ss_pred HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCC
T ss_conf 53461035534189988899999999887740475142176578999999999856788887676316589888650888
Q ss_pred CHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCEECC
Q ss_conf 04789999997122011156131478870887769720135789997899999986307684053306898854850343
Q gi|254780182|r 89 GNAAIYDALARMAQDWSLRLLLIEGQGNFGSVDGDPPAAERYTECRLQKAAHFLLDDLGKDTVDFRPNYDGSFQEPVVLC 168 (910)
Q Consensus 89 Gd~siy~a~v~maq~~~~r~plidg~GnfGs~dgd~~AA~RYte~rl~~~~~~~l~~i~~~tv~~~~n~D~~~~EP~vlP 168 (910)
||+|+|+|+|+|||+|++|+||++|||||||++||+|||||||||||++++..|+.++++++|+|.+||||+..||+++|
T Consensus 283 Ge~sl~~tiv~maq~~~~n~~ll~~~G~fGs~~g~~~aa~RYi~~~l~~~~~~~~~~~~~~~~~~~~~~dg~~~EP~~~~ 362 (692)
T 2xcs_B 283 GDSSIYEAMVRMAQDFSYRYPLVDGQGNFGSMDGDGAAAMRFTEARMTKITLELLRDINKDTIDFIDNYDGNEREPSVLP 362 (692)
T ss_dssp CHHHHHHHHHHHHCTTTCSSCSEEEESCCCCTTCCCCCCTTTCEEEECHHHHHHHTTTTTTCSCEEECTTSSCEEESSCC
T ss_pred CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCC
T ss_conf 56778788999864352166530015887899999630021687751776887642236535655530255546874478
Q ss_pred CCCCCCHHCCCCCEEEHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCEE
Q ss_conf 22732110167610101331789854789999998876187768888886345866887443447588999987012038
Q gi|254780182|r 169 ARYPNVLVNGGGGIAVGMATNIPTHNLGEVVDGCVAVIDNPDIDLDALMEIIRGPDFPTGAVILGRTGIKNAYATGRGSI 248 (910)
Q Consensus 169 ~~~P~lL~nG~~GIAvGmaTnippHNl~Ev~~a~~~~i~~p~~~~~eL~~~i~GPDFPTGG~I~~~~~i~~~y~tGrG~i 248 (910)
+.+|++||||++||||||||||||||+.|||+|++++|++|+++.++||+++|||||||||.|.|.+|+.++|.||||++
T Consensus 363 p~iP~~LvNG~~GIgtG~sT~IP~hNp~eVi~~i~~~l~~~~~~~~el~~~i~gPdfPtgg~i~g~~g~~~~y~tGrg~~ 442 (692)
T 2xcs_B 363 ARFPNLLANGASGIAVGMATNIPPHNLTELINGVLSLSKNPDISIAELMEDIEGPDFPTAGLILGKSGIRRAYETGRGSI 442 (692)
T ss_dssp CSSCHHHHHCEEEECSSCEEEECCBCHHHHHHHHHHHHTCTTCCHHHHTTTCCSBCCTTCCEEECSHHHHHHHHHSEEEE
T ss_pred CCCCHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCEEECCCCEEEHHCCCCCCE
T ss_conf 65638887368752267631567889899999999985498535899984288898998765877754000221787515
Q ss_pred EEEEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCC-CCCEEEEEEECCCCCHHHHHHHH
Q ss_conf 99998865433678459999246443528999999999987166501445873037-46557999947988778999999
Q gi|254780182|r 249 VIRGVSHIEKTSGDREQIVVTEIPYQVNKAAMLEKIAELVREKRIVDIADLRDESD-RQGYRVVIELKRGASADVILNQL 327 (910)
Q Consensus 249 ~iR~k~~ie~~~~~k~~ivItEiPY~vnk~~lie~Ia~lv~~~ki~gI~dirDeSd-r~giRivielKr~~~~~~vln~L 327 (910)
++|+++++++.++|+++|+||||||++++++++|+|++++++||+++|+|++|||+ +.|+||||++|++.+++.++++|
T Consensus 443 ~~~~~~~~~~~~~~k~~I~ITELP~g~wt~~yke~L~~lv~~kki~~i~d~~des~~~~~vrivi~~k~~~~~~~~~~~L 522 (692)
T 2xcs_B 443 QMRSRAVIEERGGGRQRIVVTEIPFQVNKARMIEKIAELVRDKKIDGITDLRDETSLRTGVRVVIDVRKDANASVILNNL 522 (692)
T ss_dssp EEECEEEEEEEETTEEEEEEEECCTTCCHHHHHHHHHHHHHTTCSCCEEEEEECCBTTTBSCEEEEECTTSCHHHHHHHH
T ss_pred EEEEEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCEEEEEEEECCCCCHHHHHHHH
T ss_conf 89999999994499659999825887778999999999997599776055114566652179999826887889999878
Q ss_pred HHHCCHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 97610110000002455416630002999999999999999999999999999888778999999874069999998618
Q gi|254780182|r 328 YRYTSLQSLFSVNMVALNGYKPERFTLIGILKAFVAFREEVVVRRTKYLLNKARDRAHVLVGLAIAVANLDEVVRIIRFS 407 (910)
Q Consensus 328 yk~T~Lq~sf~~N~~aL~~g~P~~l~Lk~iL~~fi~hR~evi~rRt~~~L~ka~~R~HILeGL~~Al~nIDeVI~iIR~S 407 (910)
|++|+||+||++||++|++|+|+++++.+||++|++||.++++||.+|+|+++++|+|||+|+++|+++||+||++||+|
T Consensus 523 ~k~tkL~tsis~N~~~l~dg~pk~~~~~eIL~~f~~~Rle~y~KRkey~L~kle~rl~iLegl~~~i~~ID~vIkiIr~s 602 (692)
T 2xcs_B 523 YKQTPLQTSFGVNMIALVNGRPKLINLKEALVHYLEHQKTVVRRRTQYNLRKAKDRAHILEGLRIALDHIDEIISTIRES 602 (692)
T ss_dssp HHHSTTEEEEEEECEEEETTEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTC
T ss_pred HHHCCCEEEECCEEEEEECCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 87577322102069999889368932599999999999999999999999999999999980999998499999999829
Q ss_pred CCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99789878776312697889999974022111222344523699999999987899998887999999899999999988
Q gi|254780182|r 408 PNPETARRELMQRSWNASDIKDLIDLIDDSSYTIGSDGTMYLSEVQTRAILELRLARLTGLGRDDIRNELNSLGIEIKEC 487 (910)
Q Consensus 408 ~d~~eAk~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~lSe~QA~AILdMrL~rLt~LE~~kl~~E~~eL~~~I~~l 487 (910)
+++++|+..|+++ |++|+.||+|||+|||++||++|++||++|+++|.++|++|
T Consensus 603 k~~~~a~~~L~~~--------------------------f~lse~QadyLL~M~L~~LT~eeieKL~~E~~el~~ei~eL 656 (692)
T 2xcs_B 603 DTDKVAMESLQQR--------------------------FKLSEKQAQAILDMRLRRLTGLERDKIEAEYNELLNYISEL 656 (692)
T ss_dssp SSHHHHHHHHHHH--------------------------HTCCHHHHHHHHTCBGGGGSTTHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHH--------------------------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9989999999986--------------------------59999999999970999975779999999999999999999
Q ss_pred HHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEC
Q ss_conf 75304989999999998999998405688331001
Q gi|254780182|r 488 LDILSSRSRLLGIIKQELLSVKDELDTPRRTRIVE 522 (910)
Q Consensus 488 ~~IL~s~~~l~~iI~~EL~eik~kygd~RRT~I~~ 522 (910)
++||+|++.+|+++++||.+++++||++|||+|.+
T Consensus 657 ~~iL~s~~~l~~~i~~EL~~lkkky~~~RRT~Ie~ 691 (692)
T 2xcs_B 657 ETILADEEVLLQLVRDELTEIRDRFGDDRRTEIQL 691 (692)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHCCCCCSEEEC
T ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 99868999999999999999999828987862158