PSIBLAST alignment of GI: 254780182 and protein with PDB id: 1wp5
>gi|56554393|pdb|1WP5|A Chain A, Crystal Structure Of The C-Terminal Domain Of Dna Topoisomerase Iv Length = 323
Score = 177 bits (448), Expect = 9e-42, Method: Composition-based stats.
Identities = 77/372 (20%), Positives = 148/372 (39%), Gaps = 63/372 (16%)
Query: 534 VREDMVVTVSHLGYVKRVPLSVYRAQRRGGKGRSGVVMRDEDFVTDLFIVSTHTSVLFFS 593
ED++VTV+ GYVKR L Y A +D D + +T +L F+
Sbjct: 3 ASEDVIVTVTKDGYVKRTSLRSYAASNG-----QDFAXKDTDRLLAXLEXNTKDVLLLFT 57
Query: 594 SLGFVYKEKVWRLPIGSPQARGKALINILSLNQGERITTIMPFPEDESSWNNLYVVFATK 653
+ G V LP + G+ + NI+ +++ E I +P + E N Y +F T+
Sbjct: 58 NKGNYLYCPVHELPDIRWKDLGQHIANIIPIDRDEEIIKAIPINDFEL---NGYFLFVTR 114
Query: 654 HGNVRRNKLSDFIQINRSGKIA-MKLDSRDEILSVETCTQENDILLTTKLGQCVRFPISA 712
+G V++ +L + S + + L + D+++ V N++ L T G + F S
Sbjct: 115 NGXVKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHLTDGXNELFLVTHNGYALWFDESE 174
Query: 713 IRVFAGRNSVGVRGISLAKGDQVISMAIVLHADADYDERICYMKHMSAQRRLISGDTEEI 772
+ G + GV+G +L +GD ++S ++ D
Sbjct: 175 V-SIVGVRAAGVKGXNLKEGDYIVSGQLITSKD--------------------------- 206
Query: 773 TSLKNDSSVEGNISEERCQELKLKEQFILTVSEKGFGKRTSSYDFRISNRSGKGIRATDV 832
+ I+ +++G K+ +F + R+ +G+
Sbjct: 207 -------------------------ESIVVATQRGAVKKXKLTEFEKATRAKRGVVILRE 241
Query: 833 SKINEIGALVAVFPVNDNDQIILVSDKGTLIRVPVNEIRIASRATKGVVIFSTAKDERVV 892
K N + D+D I L ++K + + V +IR + R + G + ++ RV+
Sbjct: 242 LKANPH-RISGFVVAQDSDTIYLQTEKSFIETIKVGDIRFSDRYSNGSFVLDEEENGRVI 300
Query: 893 SVERIRESEIVD 904
SV ++ + +
Sbjct: 301 SVWKVEAEDKTE 312