PSIBLAST alignment of GI: 254780182 and protein with PDB id: 1wp5

>gi|56554393|pdb|1WP5|A Chain A, Crystal Structure Of The C-Terminal Domain Of Dna Topoisomerase Iv Length = 323
 Score =  177 bits (448), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 77/372 (20%), Positives = 148/372 (39%), Gaps = 63/372 (16%)

Query: 534 VREDMVVTVSHLGYVKRVPLSVYRAQRRGGKGRSGVVMRDEDFVTDLFIVSTHTSVLFFS 593
             ED++VTV+  GYVKR  L  Y A             +D D +      +T   +L F+
Sbjct: 3   ASEDVIVTVTKDGYVKRTSLRSYAASNG-----QDFAXKDTDRLLAXLEXNTKDVLLLFT 57

Query: 594 SLGFVYKEKVWRLPIGSPQARGKALINILSLNQGERITTIMPFPEDESSWNNLYVVFATK 653
           + G      V  LP    +  G+ + NI+ +++ E I   +P  + E    N Y +F T+
Sbjct: 58  NKGNYLYCPVHELPDIRWKDLGQHIANIIPIDRDEEIIKAIPINDFEL---NGYFLFVTR 114

Query: 654 HGNVRRNKLSDFIQINRSGKIA-MKLDSRDEILSVETCTQENDILLTTKLGQCVRFPISA 712
           +G V++ +L  +     S  +  + L + D+++ V      N++ L T  G  + F  S 
Sbjct: 115 NGXVKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHLTDGXNELFLVTHNGYALWFDESE 174

Query: 713 IRVFAGRNSVGVRGISLAKGDQVISMAIVLHADADYDERICYMKHMSAQRRLISGDTEEI 772
           +    G  + GV+G +L +GD ++S  ++   D                           
Sbjct: 175 V-SIVGVRAAGVKGXNLKEGDYIVSGQLITSKD--------------------------- 206

Query: 773 TSLKNDSSVEGNISEERCQELKLKEQFILTVSEKGFGKRTSSYDFRISNRSGKGIRATDV 832
                                    + I+  +++G  K+    +F  + R+ +G+     
Sbjct: 207 -------------------------ESIVVATQRGAVKKXKLTEFEKATRAKRGVVILRE 241

Query: 833 SKINEIGALVAVFPVNDNDQIILVSDKGTLIRVPVNEIRIASRATKGVVIFSTAKDERVV 892
            K N    +       D+D I L ++K  +  + V +IR + R + G  +    ++ RV+
Sbjct: 242 LKANPH-RISGFVVAQDSDTIYLQTEKSFIETIKVGDIRFSDRYSNGSFVLDEEENGRVI 300

Query: 893 SVERIRESEIVD 904
           SV ++   +  +
Sbjct: 301 SVWKVEAEDKTE 312