RPSBLAST alignment of GI: 254780182 and protein with PDBid: 1zvt

>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA binding, DNA topology; 1.70A {Escherichia coli} Length = 256

 Score =  115 bits (289), Expect = 4e-26
 Identities = 38/215 (17%), Positives = 79/215 (36%), Gaps = 20/215 (9%)

Query: 536 EDMVVTVSHLGYVKRVPLSVYRAQRRGGKGRSGVVMRDEDFVTDLFIVSTHTSVLFFSSL 595
           E + + +S +G+V        R+ +       G+  +  D         ++  V+F  S 
Sbjct: 2   EPVTIVLSQMGWV--------RSAKGHDIDAPGLNYKAGDSFKAAVKGKSNQPVVFVDST 53

Query: 596 GFVYKEKVWRLPIGSPQARGKALINILSLNQGERITTIMPFPEDESSWNNLYVVFATKHG 655
           G  Y      LP    Q         L+L  G  +  ++   +D+       ++ A+  G
Sbjct: 54  GRSYAIDPITLPSARGQGEPL--TGKLTLPPGATVDHMLMESDDQ------KLLMASDAG 105

Query: 656 NVRRNKLSDFIQINRSGKIAMKLDSRDEILSVETCT-QENDILLTTKLGQCVRFPISAIR 714
                  +D +  NR+GK  + L     ++         + +L  T+ G+ + FP+S + 
Sbjct: 106 YGFVCTFNDLVARNRAGKALITLPENAHVMPPVVIEDASDMLLAITQAGRMLMFPVSDLP 165

Query: 715 VF---AGRNSVGVRGISLAKGDQVISMAIVLHADA 746
                 G   + +     A+G+  ++   VL   +
Sbjct: 166 QLSKGKGNKIINIPSAEAARGEDGLAQLYVLPPQS 200