RPSBLAST alignment of GI: 254780182 and protein with PDBid: 2wl2
>2wl2_A GYRA, DNA gyrase subunit A; isomerase, aminocoumarin antibiotic, drug target, protein-ligand complex; HET: DNA SM8; 2.62A {Escherichia coli} PDB: 1ab4_A 1x75_A* Length = 522
Score = 634 bits (1637), Expect = 0.0
Identities = 271/523 (51%), Positives = 363/523 (69%), Gaps = 11/523 (2%)
Query: 8 SDEEEEKGITSVSITDEMQNSYLTYAINVILGRAIPDLRDGLKPVHRRILFGMMQMGVEW 67
SD E IT V+I +E+++SYL YA++VI+GRA+PD+RDGLKPVHRR+L+ M +G +W
Sbjct: 1 SDLARE--ITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDW 58
Query: 68 NKKYVKCARISGEVMGKYHPHGNAAIYDALARMAQDWSLRLLLIEGQGNFGSVDGDPPAA 127
NK Y K AR+ G+V+GKYHPHG++A+YD + RMAQ +SLR +L++GQGNFGS+DGD AA
Sbjct: 59 NKAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAA 118
Query: 128 ERYTECRLQKAAHFLLDDLGKDTVDFRPNYDGSFQEPVVLCARYPNVLVNGGGGIAVGMA 187
RYTE RL K AH L+ DL K+TVDF NYDG+ + P V+ + PN+LVNG GIAVGMA
Sbjct: 119 MRYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMA 178
Query: 188 TNIPTHNLGEVVDGCVAVIDNPDIDLDALMEIIRGPDFPTGAVILGRTGIKNAYATGRGS 247
TNIP HNL EV++GC+A ID+ DI ++ LME I GPDFPT A+I GR GI+ AY TGRG
Sbjct: 179 TNIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGK 238
Query: 248 IVIRGVSHIEK-TSGDREQIVVTEIPYQVNKAAMLEKIAELVREKRIVDIADLRDESDRQ 306
+ IR + +E RE I+V EIPYQVNKA ++EKIAELV+EKR+ I+ LRDESD+
Sbjct: 239 VYIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKD 298
Query: 307 GYRVVIELKRGASADVILNQLYRYTSLQSLFSVNMVALNGYKPERFTLIGILKAFVAFRE 366
G R+VIE+KR A +V+LN LY T LQ F +NMVAL+ +P+ L I+ AFV R
Sbjct: 299 GMRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRR 358
Query: 367 EVVVRRTKYLLNKARDRAHVLVGLAIAVANLDEVVRIIRFSPNPETARRELMQRSWNASD 426
EVV RRT + L KARDRAH+L LA+A+AN+D ++ +IR +P P A+ L+ W +
Sbjct: 359 EVVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGN 418
Query: 427 IKDLIDLIDDSSYTI--------GSDGTMYLSEVQTRAILELRLARLTGLGRDDIRNELN 478
+ +++ D + DG YL+E Q +AIL+LRL +LTGL + + +E
Sbjct: 419 VAAMLERAGDDAARPEWLEPEFGVRDGLYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYK 478
Query: 479 SLGIEIKECLDILSSRSRLLGIIKQELLSVKDELDTPRRTRIV 521
L +I E L IL S RL+ +I++EL V+++ RRT I
Sbjct: 479 ELLDQIAELLRILGSADRLMEVIREELELVREQFGDKRRTEIT 521