HHsearch alignment for GI: 254780183 and conserved domain: PRK05733
>PRK05733 single-stranded DNA-binding protein; Provisional.
Probab=100.00 E-value=1.4e-45 Score=290.88 Aligned_cols=114 Identities=47% Similarity=0.912 Sum_probs=109.0
Q ss_pred CCCCCCEEEEEEEECCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCEEECEEEECCCCCHHHHHHHHHHHCCCCCEEEE
Q ss_conf 98778379999642588667986999869999998345642026884530112430211015898772211047715999
Q gi|254780183|r 1 MVASLNKVILIGNLGADPDVRHTQDGRKIVNIRIATSDSWKDRVTNERREKTEWHSVIVFSEELCRIVEQYLRKGSKVYI 80 (159)
Q Consensus 1 mm~~mN~v~l~G~l~~dPelr~~~~g~~v~~f~va~~~~~~~~~~~~~~d~t~~~~v~~~g~~~Ae~~~~~l~KG~~V~V 80 (159)
T Consensus 1 ma~~~NkV~LiG~lg~DPElr~t~~G~~v~~fslAt~~~~~~~~~ge~~e~T~w~~v~~wgk-~AE~~~~yl~KG~~V~V 79 (172)
T PRK05733 1 MARGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQSGQKVERTEWHRVSLFGK-VAEIAGEYLRKGSQVYI 79 (172)
T ss_pred CCCCCCEEEEEEECCCCCEEEECCCCCEEEEEEEEEECCCCCCCCCCEECCCCEEEEEEECH-HHHHHHHHCCCCCEEEE
T ss_conf 98876289997555779638888999879999999725500167875831232289987345-78888865389998999
Q ss_pred EECCCCCCCCCCCCCEEEEEEEEEE---EEEECCCCCCC
Q ss_conf 8413333320468837688999997---76984667776
Q gi|254780183|r 81 EGSLQTRKWQDQSGNNRYTTEIIMR---SMVMLDGRRDS 116 (159)
Q Consensus 81 ~Grl~~~~~~~kdG~~r~~~~V~a~---~i~~l~~~~~~ 116 (159)
T Consensus 80 eGrL~tr~we-kdG~kry~teiv~~~~~~~q~lg~r~~~ 117 (172)
T PRK05733 80 EGKLQTREWE-KDGIKRYTTEIVVDMQGTMQLLGGRPQG 117 (172)
T ss_pred EEEEEEECHH-HCCCEEEEEEEEEECCCCEEEECCCCCC
T ss_conf 9888840475-5898798999999457757883277777