HHsearch alignment for GI: 254780183 and conserved domain: PRK06642
>PRK06642 single-stranded DNA-binding protein; Provisional.
Probab=100.00 E-value=4.5e-44 Score=282.78 Aligned_cols=148 Identities=50% Similarity=0.935 Sum_probs=121.9
Q ss_pred CCCCCCEEEEEEEECCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCEEECEEEECCCCCHHHHHHHHHHHCCCCCEEEE
Q ss_conf 98778379999642588667986999869999998345642026884530112430211015898772211047715999
Q gi|254780183|r 1 MVASLNKVILIGNLGADPDVRHTQDGRKIVNIRIATSDSWKDRVTNERREKTEWHSVIVFSEELCRIVEQYLRKGSKVYI 80 (159)
Q Consensus 1 mm~~mN~v~l~G~l~~dPelr~~~~g~~v~~f~va~~~~~~~~~~~~~~d~t~~~~v~~~g~~~Ae~~~~~l~KG~~V~V 80 (159)
T Consensus 1 ma~s~NkV~LiG~lg~DPElr~t~~G~~v~~fslA~~~~~k~~~~ge~~e~t~w~~vv~~~k~~ae~~~~yl~KG~~V~V 80 (152)
T PRK06642 1 MAGSLNKVILIGNVGRDPEIRTTGEGKKIINLSLATTETWKDRITSERKERTEWHRVVIFSEGLVSVVERYVTKGSKLYI 80 (152)
T ss_pred CCCCCEEEEEEEECCCCCEEEECCCCCEEEEEEEEEEECEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
T ss_conf 99875189998635769658887999768999999730101125776243116888776338999999986568888999
Q ss_pred EECCCCCCCCCCCCCEEEEEEEEEEEEE----ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 8413333320468837688999997769----846677766667777777766777655666666765445677877455
Q gi|254780183|r 81 EGSLQTRKWQDQSGNNRYTTEIIMRSMV----MLDGRRDSLQGEEQRSEQHSNNLKENVVGNRYSSPREESVFSDELDDE 156 (159)
Q Consensus 81 ~Grl~~~~~~~kdG~~r~~~~V~a~~i~----~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dDd 156 (159)
T Consensus 81 eG~L~~r~y~dkdG~~r~~teIv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~DDD 149 (152)
T PRK06642 81 EGSLQTRKWNDNSGQEKYTTEVVLQNFNSQLILLDSKNSNNHTQDSGHSEYK-----------HPETKNHSFDHSDLDDE 149 (152)
T ss_pred EEEEEECCCCCCCCCEEEEEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCC-----------CCCCCCCCCCCCCCCCC
T ss_conf 6678753559899998989999996787636763478887777777777657-----------89887778878877777
Q ss_pred CCC
Q ss_conf 798
Q gi|254780183|r 157 IPF 159 (159)
Q Consensus 157 iPF 159 (159)
T Consensus 150 iPF 152 (152)
T PRK06642 150 IPF 152 (152)
T ss_pred CCC
T ss_conf 899