HHsearch alignment of GI: 254780183 and MMDB domain: 2fxq_A_
>2fxq_A (A:) Single-strand binding protein; strand beta-sheet extended loops, DNA binding protein; 1.85A {Thermus aquaticus} PDB: 2ihe_A 2cwa_A 2ihf_A
Probab=99.72 E-value=1.3e-16 Score=118.93 Aligned_cols=133 Identities=26% Similarity=0.454 Sum_probs=88.4
Q ss_pred EEEEEECCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCEEECEEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCC
Q ss_conf 99964258866798699986999999834564202688453011243021101589877221104771599984133333
Q gi|254780183|r 9 ILIGNLGADPDVRHTQDGRKIVNIRIATSDSWKDRVTNERREKTEWHSVIVFSEELCRIVEQYLRKGSKVYIEGSLQTRK 88 (159)
Q Consensus 9 ~l~G~l~~dPelr~~~~g~~v~~f~va~~~~~~~~~~~~~~d~t~~~~v~~~g~~~Ae~~~~~l~KG~~V~V~Grl~~~~ 88 (159)
...++....+.............+.... .....+++.+.|+||+|++|++ .|+++ +||+||++|+|+|+|++++
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~a~~~-~~~~kG~~v~v~G~~~~~~ 205 (264)
T 2fxq_A 132 ILMGNLTRDPDLRYTPQGTAVVRLGLAV----NERRRGQEEERTHFLEVQAWRE-LAEWA-SELRKGDGLLVIGRLVNDS 205 (264)
T ss_dssp EEEEEESSCCCCEECTTCCEEEEEEEEE----ECCC-------EEEEEEEEEHH-HHHHH-TTCCTTCEEEEEEEEEEEE
T ss_pred CEEEEECCCEEEEECCCCCEEEEEEEEE----CCCCCCCCCCCEEEEEEEEEEH-HHHHH-HHCCCCCEEEEEEEEEEEE
T ss_conf 1320412560577989998899896988----8874788766248999999715-53010-3310473899999877201
Q ss_pred CCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 20468837688999997769846677766667777777766777655666666765445677877455798
Q gi|254780183|r 89 WQDQSGNNRYTTEIIMRSMVMLDGRRDSLQGEEQRSEQHSNNLKENVVGNRYSSPREESVFSDELDDEIPF 159 (159)
Q Consensus 89 ~~~kdG~~r~~~~V~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dDdiPF 159 (159)
|+++||++|+.++|+|++|.+|+++............+.. ..+..........||||||
T Consensus 206 ~~~~~g~~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~ddd~PF 264 (264)
T 2fxq_A 206 WTSSSGERRFQTRVEALRLERPTRGPAQAGGSRPPTVQTG------------GVDIDEGLEDFPPEEDLPF 264 (264)
T ss_dssp EECTTSCEEEEEEEEEEEEECCCC-----------------------------------------------
T ss_pred EECCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCC------------CCCCCCCCCCCCCCCCCCC
T ss_conf 4889998899999999999966777655677889887778------------8887766567898889998