HHsearch alignment of GI: 254780183 and MMDB domain: 3f2b_A_1-110

>3f2b_A (A:1-110) DNA-directed DNA polymerase III alpha chain; DNA polymerase C; HET: DGT; 2.39A {Geobacillus kaustophilus} PDB: 3f2c_A* 3f2d_A*
Probab=97.72  E-value=0.00088  Score=42.48  Aligned_cols=88  Identities=22%  Similarity=0.319  Sum_probs=66.1

Q ss_pred             CCCCEEEEEEEECCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCEEECEEEECCCCCH--HHHHHHHHHHCCCCCEEEE
Q ss_conf             77837999964258866798699986999999834564202688453011243021101--5898772211047715999
Q gi|254780183|r    3 ASLNKVILIGNLGADPDVRHTQDGRKIVNIRIATSDSWKDRVTNERREKTEWHSVIVFS--EELCRIVEQYLRKGSKVYI   80 (159)
Q Consensus         3 ~~mN~v~l~G~l~~dPelr~~~~g~~v~~f~va~~~~~~~~~~~~~~d~t~~~~v~~~g--~~~Ae~~~~~l~KG~~V~V   80 (159)
                      ..+..|.+.|-|.. .+.+.+.+|+.++.|+|.              |.+.-+.|++|.  +.+.+ ....|++|+.|+|
T Consensus        15 ~~~~~v~i~G~V~~-~~~~~tK~G~~~~~~~l~--------------D~tg~ie~~~F~~~~~~~~-~~~~l~~g~~v~v   78 (110)
T 3f2b_A           15 EEERRVVVQGYVFD-AEVSELKSGRTLLTMKIT--------------DYTNSILVKMFSRDKEDAE-LMSGVKKGMWVKV   78 (110)
T ss_dssp             SCEEEEEEEEEEEE-EEEEECTTSCEEEEEEEE--------------CSSCEEEEEEECSSHHHHH-HHHTCCTTCEEEE
T ss_pred             CCCCEEEEEEEEEE-EEEEEECCCCEEEEEEEE--------------ECCCCEEEEEECCCCCHHH-HHHHCCCCCEEEE
T ss_conf             63676999999987-787870589889999998--------------2788689999558743288-9850679968999


Q ss_pred             EECCCCCCCCCCCCCEEEEEEEEEEEEEECCCC
Q ss_conf             841333332046883768899999776984667
Q gi|254780183|r   81 EGSLQTRKWQDQSGNNRYTTEIIMRSMVMLDGR  113 (159)
Q Consensus        81 ~Grl~~~~~~~kdG~~r~~~~V~a~~i~~l~~~  113 (159)
                      .|++..++|.   |    ...+.+..+..|+..
T Consensus        79 ~G~v~~~~~~---~----~~~l~v~~i~~i~~~  104 (110)
T 3f2b_A           79 RGSVQNDTFV---R----DLVIIANDLNEIAAN  104 (110)
T ss_dssp             EEEEEEETTT---T----EEEEEEEEEEEECCC
T ss_pred             EEEEECCCCC---C----CEEEEEEEEEECCCC
T ss_conf             9988515777---7----427872123654775