HHsearch results for GI: 254780183 and protein with PDBid: 3afp_A
>3afp_A Single-stranded DNA-binding protein; OB-fold, quaternary structure and stability, changes on oligomerisation, water-bridges, DNA damage; 2.05A {Mycobacterium leprae} PDB: 3afq_A 1ue1_A 1ue5_A 1ue6_A 1ue7_A 1x3e_A 1x3f_A 1x3g_A 3a5u_A*
Probab=100.00 E-value=9.7e-39 Score=249.73 Aligned_cols=110 Identities=25% Similarity=0.449 Sum_probs=104.0
Q ss_pred CCCCCEEEEEEEECCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCEEE-CEEEECCCCCHHHHHHHHHHHCCCCCEEEE
Q ss_conf 8778379999642588667986999869999998345642026884530-112430211015898772211047715999
Q gi|254780183|r 2 VASLNKVILIGNLGADPDVRHTQDGRKIVNIRIATSDSWKDRVTNERRE-KTEWHSVIVFSEELCRIVEQYLRKGSKVYI 80 (159)
Q Consensus 2 m~~mN~v~l~G~l~~dPelr~~~~g~~v~~f~va~~~~~~~~~~~~~~d-~t~~~~v~~~g~~~Ae~~~~~l~KG~~V~V 80 (159)
||+.|+|+|+|||++|||||++++|.++++|+||++++|+++.+++|++ .|+||+|++||+ +|+++++||+||++|+|
T Consensus 1 Ma~~N~V~l~G~l~~dpe~r~t~~G~~v~~f~la~~~~~~~~~~g~~~~~~t~~~~v~~~g~-~Ae~~~~~~~KG~~V~V 79 (168)
T 3afp_A 1 MAGDTTITIVGNLTADPELRFTSSGAAVVNFTVASTPRIYDRQSGEWKDGEALFLRCNIWRE-AAENVAESLTRGARVIV 79 (168)
T ss_dssp --CCCEEEEEEEESSSCCCEECTTSCEEEEEEEEECC--------CCCCCCCEEEEEEEEHH-HHHHHHHHCCTTCEEEE
T ss_pred CCCCCEEEEEEECCCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEECHH-HHHHHHHHHCCCCEEEE
T ss_conf 99768899999847698899879997899999997244331467850246507579998769-99999997179998999
Q ss_pred EECCCCCCCCCCCCCEEEEEEEEEEEEEECCC
Q ss_conf 84133333204688376889999977698466
Q gi|254780183|r 81 EGSLQTRKWQDQSGNNRYTTEIIMRSMVMLDG 112 (159)
Q Consensus 81 ~Grl~~~~~~~kdG~~r~~~~V~a~~i~~l~~ 112 (159)
+|||++++|++++|++|+.++|+|+.|.++..
T Consensus 80 ~G~l~~~~~~~~~g~~~~~~~i~a~~v~~~l~ 111 (168)
T 3afp_A 80 TGRLKQRSFETREGEKRTVVEVEVDEIGPSLR 111 (168)
T ss_dssp EEEEEEEEEC-CCSCCEEEEEEEEEEEEECCS
T ss_pred EEEEECCCCCCCCCCEEEEEEEEEEEECCCCC
T ss_conf 99865365198999889999999987414311