HHSEARCH alignment of GI: 254780183 and SCOP domain: d1jmca1

Alignment
>d1jmca1 b.40.4.3 (A:183-298) Replication protein A 70 KDa subunit (RPA70) {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.53  E-value=0.3  Score=25.11  Aligned_cols=68  Identities=13%  Similarity=0.197  Sum_probs=47.8

Q ss_pred             CCCCEEEEEEEECCCCEEEECC--CCC-EEEEEEEEECCCCCCCCCCCEEECEEEECCCCCHHHHHHHHHHHCCCCCEEE
Q ss_conf             7783799996425886679869--998-6999999834564202688453011243021101589877221104771599
Q gi|254780183|r    3 ASLNKVILIGNLGADPDVRHTQ--DGR-KIVNIRIATSDSWKDRVTNERREKTEWHSVIVFSEELCRIVEQYLRKGSKVY   79 (159)
Q Consensus         3 ~~mN~v~l~G~l~~dPelr~~~--~g~-~v~~f~va~~~~~~~~~~~~~~d~t~~~~v~~~g~~~Ae~~~~~l~KG~~V~   79 (159)
                      -.|++++|.||+.+--++|.+.  +|. .+..+.|+      |.. |      . +.|++|++ +|+.....|+.|+-..
T Consensus        10 p~~~~~~I~~RV~~k~~~r~f~~~~~~g~v~~~~l~------De~-G------~-I~~t~~~~-~~~~f~~~l~~G~vy~   74 (116)
T d1jmca1          10 PYQSKWTICARVTNKSQIRTWSNSRGEGKLFSLELV------DES-G------E-IRATAFNE-QVDKFFPLIEVNKVYY   74 (116)
T ss_dssp             TTCCCCEEEEEEEEECCCEEEECSSCEEEEEEEEEE------CSS-C------E-EEEEEEHH-HHHHHGGGCCTTCEEE
T ss_pred             CCCCCEEEEEEEEEECCCEEEECCCCCCEEEEEEEE------CCC-C------C-EEEEECHH-HHHHHHHHCCCCCEEE
T ss_conf             899878999999871356588778997259999999------089-9------7-99998636-6322574015587999


Q ss_pred             EEECCC
Q ss_conf             984133
Q gi|254780183|r   80 IEGSLQ   85 (159)
Q Consensus        80 V~Grl~   85 (159)
                      +.+--.
T Consensus        75 i~~~~V   80 (116)
T d1jmca1          75 FSKGTL   80 (116)
T ss_dssp             EECCEE
T ss_pred             ECCEEE
T ss_conf             906099


SCOP domain information

class: All beta proteins
fold: OB-fold
superfamily: Nucleic acid-binding proteins
family: Single strand DNA-binding domain, SSB
domain: Replication protein A 70 KDa subunit (RPA70)
species: Human (Homo sapiens) [TaxId: 9606]