HHSEARCH alignment of GI: 254780183 and SCOP domain: d1se8a_

Alignment
>d1se8a_ b.40.4.3 (A:) ssDNA-binding protein {Deinococcus radiodurans [TaxId: 1299]}
Probab=99.97  E-value=9.3e-32  Score=206.73  Aligned_cols=109  Identities=30%  Similarity=0.600  Sum_probs=102.3

Q ss_pred             CCCCCCEEEEEEEECCCCEEEECCCCCEEEEEEEEECCCCCCCCCCCEEECEEEECCCCCHHHHHHHHHHHCCCCCEEEE
Q ss_conf             98778379999642588667986999869999998345642026884530112430211015898772211047715999
Q gi|254780183|r    1 MVASLNKVILIGNLGADPDVRHTQDGRKIVNIRIATSDSWKDRVTNERREKTEWHSVIVFSEELCRIVEQYLRKGSKVYI   80 (159)
Q Consensus         1 mm~~mN~v~l~G~l~~dPelr~~~~g~~v~~f~va~~~~~~~~~~~~~~d~t~~~~v~~~g~~~Ae~~~~~l~KG~~V~V   80 (159)
                      |+.+||+|+|+|||++|||+|++++|.++|+|+||++++|+++. ++|+++|+||+|++||+ +|++++ +|+||++|+|
T Consensus       123 m~~~~N~v~l~G~l~~dpe~r~t~~G~~~~~f~va~~~~~~~~~-g~~~~~t~~~~v~~~g~-~Ae~~~-~l~KG~~V~V  199 (231)
T d1se8a_         123 MSGAMNEVLVLGNVTRDPEIRYTPAGDAVLSLSIAVNENYQDRQ-GQRQEKVHYIDATLWRD-LAENMK-ELRKGDPVMI  199 (231)
T ss_dssp             EETCEEEEEEEEEECSCCEEEECTTCCEEEEEEEEEEEEEECTT-SCEEEEEEEEEEEEETH-HHHHHT-TCCTTCEEEE
T ss_pred             CCCCCEEEEEEEEECCCCEEEECCCCCEEEEEEEEECCCEECCC-CCEEEEEEEEEEEECCC-HHHHHH-HCCCCCEEEE
T ss_conf             11243018999993898499997899889999999779749898-96615337877675370-777765-3799799999


Q ss_pred             EECCCCCCCCCCCCCEEEEEEEEEEEEEECCC
Q ss_conf             84133333204688376889999977698466
Q gi|254780183|r   81 EGSLQTRKWQDQSGNNRYTTEIIMRSMVMLDG  112 (159)
Q Consensus        81 ~Grl~~~~~~~kdG~~r~~~~V~a~~i~~l~~  112 (159)
                      +|+|++++|+++||++|+.++|+|++|.||+.
T Consensus       200 ~G~l~~~~~~~kdG~~r~~~~i~a~~v~~L~r  231 (231)
T d1se8a_         200 MGRLVNEGWTDKDGNKRNSTRVEATRVEALAR  231 (231)
T ss_dssp             EEEEEEEECC------CEEEEEEEEEEEECCC
T ss_pred             EEEEEECEEECCCCCEEEEEEEEEEEEEECCC
T ss_conf             99968250799999799999999999998059


SCOP domain information

class: All beta proteins
fold: OB-fold
superfamily: Nucleic acid-binding proteins
family: Single strand DNA-binding domain, SSB
domain: ssDNA-binding protein
species: Deinococcus radiodurans [TaxId: 1299]