RPSBLAST alignment for GI: 254780184 and conserved domain: PRK00635
>gnl|CDD|167016 PRK00635, PRK00635, excinuclease ABC subunit A; Provisional. Length = 1809
Score = 618 bits (1595), Expect = e-177
Identities = 346/938 (36%), Positives = 526/938 (56%), Gaps = 47/938 (5%)
Query: 7 ISIRGAREHNLQNISIELPRNKLIVMTGVSGSGKSSLAFDTIHAEGQRRYVESLSTYARQ 66
+ + G NL+NISIE +++++TGVSGSGKSSLAFDTI+A G++RY+ +L ++
Sbjct: 6 VRLSGITVRNLKNISIEFCPREIVLLTGVSGSGKSSLAFDTIYAAGRKRYLSTLPSFFAT 65
Query: 67 FLGTIKKPDVEQIDGLSPTISIEQKNTSHNPRSTVGTITEIHDYLRLLFARIGIPHSPTT 126
L ++ P VE+I+GLSPTI+++Q + S + +TVG+ TE++ +L LLF+ G P T
Sbjct: 66 TLDSLPDPSVEKIEGLSPTIAVKQNHFSQHSHATVGSTTELNSHLALLFSLEGQARDPVT 125
Query: 127 GLPIESQTISQMADRLLSFEQGTRMYLLAPIVRNRKGEYKKELAEILKKGFQRVQIDGVF 186
P+ + ++ + + GT++ LLAP+ + E L++GF +V+IDG
Sbjct: 126 LHPLTLYSKEKILSTIAAIPDGTQITLLAPLPAKDI----LAIRECLRQGFTKVRIDGEI 181
Query: 187 YHISDAPDLDKKYKHTIEVVVDRIVVHENIRERIVNSLRTCLQLTNGLAIATIADSTFHN 246
I +++VVD ++ +E+ R+ SL T L + +G + + H
Sbjct: 182 SPIYKFLTSGIPEDVPVDIVVDTLIKNESNTARLKVSLFTALDIGHG-------ECSLHF 234
Query: 247 DEKTSPNLSHNSSDHILFSENLSCPVSGFSIAEIEPRIFSFNNPAGACHHCDGLGTRQKV 306
D + FS + P + + + P++FS ++ C C G G +
Sbjct: 235 DNQKR-----------TFSTQATIPETQQTYTPLTPQLFSPHSLEDRCPQCQGSGIFISI 283
Query: 307 DEKLVIPNSKLALNNGAIAPWSNPLSAYHTNILTALGKDLGFSINDSWDLLSNENQQILL 366
D+ +I + N + YHT I +L LGFS++ W LS E Q I L
Sbjct: 284 DDPSLIQQNLSIEENCCPFAGNCSTYLYHT-IYQSLADSLGFSLSTPWKDLSPEIQNIFL 342
Query: 367 YGTKKNSIALARHK----KSSYSNLSFRGIIPTL-EK-RWSEADSSLLQEIIQRYMSSSP 420
YG + + + K + ++ +RG++ + EK R+S S L + S++
Sbjct: 343 YGKEGLVLPVRLFDGTLGKKTLTHKVWRGVLNEIGEKVRYSNKPSRYLPK----GTSATS 398
Query: 421 CTICHGYRLKDESLAVKIAGKHIGEIADMSIKKAQIWFEQLPTQITQKANKISESILKEI 480
C C G L D + A GK E MS+++ I+ QLP+ K+ I E +L+ +
Sbjct: 399 CPRCQGTGLGDYANAATWHGKTFAEFQQMSLQELFIFLSQLPS----KSLSIEE-VLQGL 453
Query: 481 QKRIHFLVEIGLDYLTLSRNSNMLSNGESQRIRLASQIGSALTGVLYILDEPSIGLHQRD 540
+ R+ L+++GL YLT R LS GE +R LA +G+ L G+ YILDEPSIGLH +D
Sbjct: 454 KSRLSILIDLGLPYLTPERALATLSGGEQERTALAKHLGAELIGITYILDEPSIGLHPQD 513
Query: 541 NTKLINTLKHLRDTGNTVIVVEHDEETMLAADHIVDIGPEAGINGGKIVAEGSPSQIIAH 600
KLIN +K LRD GNTV++VEHDE+ + AD I+DIGP AGI GG+++ GSP + +A
Sbjct: 514 THKLINVIKKLRDQGNTVLLVEHDEQMISLADRIIDIGPGAGIFGGEVLFNGSPREFLAK 573
Query: 601 PTSLTGKYMSGKMSIKIPEKRRQYNPNRMIHVINARSNNLKNVTGSIPLGLFTAITGISG 660
SLT KY+ +++I IPEKR N + + A +NLK++T S+PLG T +TG+SG
Sbjct: 574 SDSLTAKYLRQELTIPIPEKRT--NSLGTLTLSKATKHNLKDLTISLPLGRLTVVTGVSG 631
Query: 661 GGKSTFLISTLYKAAARIIMGSKYNPGIYDRIDGLEYIDKVVSINQSPIGHTPRSNPATY 720
GKS+ + TL A I + I I ++V I + G + RS P TY
Sbjct: 632 SGKSSLINDTLVPAVEEFIEQGFCS---NLSIQWGA-ISRLVHITRDLPGRSQRSIPLTY 687
Query: 721 VGAFTPIRDLFSNLPESKACGYKAGCFSFNVKGGRCEVCEGNGVIKIAMHFLPDVYITCD 780
+ AF +R+LF+ P SK G FSFN G C C+G G I + I C
Sbjct: 688 IKAFDDLRELFAEQPRSKRLGLTKSHFSFNTPLGACAECQGLGSITTTDNRTS---IPCP 744
Query: 781 VCQGQRYNPETLQIRFKDKSIADVLSMTVDESLDFFAAIPTIHNKLTTLKEVGLGYIKIG 840
C G+R+ P+ L++R+K K+IAD+L MT E+ FF P+IH K+ L +GL Y+ +G
Sbjct: 745 SCLGKRFLPQVLEVRYKGKNIADILEMTAYEAEKFFLDEPSIHEKIHALCSLGLDYLPLG 804
Query: 841 QSANTLSGGESQRVKLAKELSKQATGNTLYILDEPTTGLHYHDIAKLLNILHTLVDRGNS 900
+ ++LSGGE QR+KLA EL + TLY+LDEPTTGLH HDI L+ +L +L +G++
Sbjct: 805 RPLSSLSGGEIQRLKLAYELLAPSKKPTLYVLDEPTTGLHTHDIKALIYVLQSLTHQGHT 864
Query: 901 IIVIEHNLEVIKTADWILDFGPEGGDGGGEIIASGPPE 938
+++IEHN+ V+K AD++L+ GPEGG+ GG ++AS PE
Sbjct: 865 VVIIEHNMHVVKVADYVLELGPEGGNLGGYLLASCSPE 902