RPSBLAST alignment for GI: 254780184 and conserved domain: PRK00635

>gnl|CDD|167016 PRK00635, PRK00635, excinuclease ABC subunit A; Provisional. Length = 1809
 Score =  353 bits (908), Expect = 1e-97
 Identities = 262/950 (27%), Positives = 441/950 (46%), Gaps = 102/950 (10%)

Query: 3    KIKNISIRGAREHNLQNISIELPRNKLIVMTGVSGSGKSSLAFDTIHAEGQRRYVESLST 62
               +I+I+ A +HNL++I + LPRN L  +TG S SGK SL FD ++A G   Y E    
Sbjct: 937  VPADITIKNAYQHNLKHIDLSLPRNALTAVTGPSASGKHSLVFDILYAAGNIAYAELFPP 996

Query: 63   YARQFLGTIKK---PDVEQIDGLSPTISIEQKNTSHNPRSTVGTITEIHDYLRLLFARIG 119
            Y RQ L  IKK   P V+++ GLSP I+IE+ + S N   +V +  EI + L  LFAR+G
Sbjct: 997  YIRQAL--IKKTPLPSVDKVTGLSPVIAIEKTSASKNSNHSVASALEISNGLEKLFARLG 1054

Query: 120  IPHSPTTGLPIESQTISQMADRLLSFEQGTRMYLLAPIVRNRKGEYKKELAEILKKGFQR 179
             P+SP +G  +   T   +A+ LL+      + + +PI   ++ +    L E LK+GF +
Sbjct: 1055 HPYSPLSGDALRKITPQTIAEELLTHYTKGYVTITSPI--PKEEDLFIYLQEKLKEGFLK 1112

Query: 180  VQIDGVFYHISDAPDLDKKYKHTIEVVVDRIVV-HENIRERIVNSLRTCLQLTNGLAIAT 238
            +  +  FY      DLD+    ++E     IV+ H  I E+ ++SL + L L   L+   
Sbjct: 1113 LYANEQFY------DLDEPLPTSLENPA--IVIQHTKISEKNLSSLLSSLTLAFSLS--- 1161

Query: 239  IADSTFHNDEKTSPNLS-HNSSDHILFSENLSCPVS-GFSIAEIEPRIFSFNNPAGACHH 296
                       +S  L    +   +  +  L    S G     I   + S ++  G C  
Sbjct: 1162 -----------SSICLHIEYAGTSLSLTYRLGWQDSSGNLYPNITTPLLSRDHEEGLCPL 1210

Query: 297  CDGLGTRQKVDEKLVIPNSKLALNNGAIAPWSNPLSAYHTNILTALGKDLGFSINDSWDL 356
            C G G   K     ++P+ +   +   ++ ++          +  L K+LG      +  
Sbjct: 1211 CHGKGFILKCS---LLPHKEKIAHYTPLSLFTLFFPNQDPKPVYPLLKELGIPSIALFQE 1267

Query: 357  LSNENQQILLYGTKKNSIALARHKKSSYSNLSFRGIIPTLEKRWSEADSSLLQEIIQRYM 416
            L   + + L  GT+++                   ++  +E    E++  L   +I    
Sbjct: 1268 LDTLSFESLCLGTQQH--------------PGLNALL--MEAMLMESEEPLPPPLI---- 1307

Query: 417  SSSPCTICHGYRLKDESLAVKIAGKHIGEIADMSIKKAQIWFEQ--LPTQITQKANKISE 474
            S +PC  C G  +   +  V+I        +   I +  + F +  L T    +      
Sbjct: 1308 SKTPCNQCQGLGVYTYAHCVRI-----HNTSLSDIYQEDVTFLKKFLLTIHDDEE----P 1358

Query: 475  SILKEIQKRIHFLVEIGLDYLTLSRNSNMLSNGESQRIRLASQIGSALTGVLYILDEPSI 534
            SI++++  R+ F+ ++GL Y+TL +  + LS+GE  R+ LA +I S LT ++Y+L++P  
Sbjct: 1359 SIIQDLLNRLTFIDKVGLSYITLGQEQDTLSDGEHYRLHLAKKISSNLTDIIYLLEDPLS 1418

Query: 535  GLHQRDNTKLINTLKHLRDTGNTVIVVEHDEETMLAADHIVDIGPEAGINGGKIVAEGSP 594
            GLH +D   L+  +K L    NTVI  +        ADH++ +GP +G  GG        
Sbjct: 1419 GLHPQDAPTLLQLIKELVTNNNTVIATDRSGSLAEHADHLIHLGPGSGPQGG-------- 1470

Query: 595  SQIIAHPTSLTGKYMSGKMSIKI--PEKRRQYNPNRMIHV-INARSNNLKNVTGSIPLGL 651
                         Y+    ++K   P+     +      + ++   + ++N+  S PL  
Sbjct: 1471 -------------YLLSTSALKQSQPDLHNTRSSEETPTLSVSLSIHTIQNLNVSAPLHS 1517

Query: 652  FTAITGISGGGKSTFLISTLYKAAARIIMGSKYNPGIYDRIDGLEYIDKVVSINQSPIGH 711
              AI+G+SG GK++ L+   YK A  +I              G     +++ ++  P   
Sbjct: 1518 LVAISGVSGSGKTSLLLEGFYKQACALIE------------KGPSVFSEIIFLDSHPQIS 1565

Query: 712  TPRSNPATYVGAFTPIRDLFSNLPESKACGYKAGCFSFNVKGGRCEVCEGNGVIKIAMHF 771
            + RS+ +TY      +R+ +++L ++KA    A  FS N K G+C  C G G   I   F
Sbjct: 1566 SQRSDISTYFDIAPSLRNFYASLTQAKALNISASMFSTNTKQGQCSDCWGLGYQWIDRAF 1625

Query: 772  LPDVYITCDVCQGQRYNPETLQIRFKDKSIADVLSMTVDESLDFFAAIPTIHNKLTTLKE 831
                   C  C G R  P   ++ ++ K    +L   ++E  + F  +  I   L  L +
Sbjct: 1626 YALEKRPCPTCSGFRIQPLAQEVVYEGKHFGQLLQTPIEEVAETFPFLKKIQKPLQALID 1685

Query: 832  VGLGYIKIGQSANTLSGGESQRVKLAKELSKQATGNTLYILDEPTTGLHYHDIAKLLNIL 891
             GLGY+ +GQ+ ++LS  E   +K+AK L       TL++LDE  T L     + LL  L
Sbjct: 1686 NGLGYLPLGQNLSSLSLSEKIAIKIAKFLYLPPKHPTLFLLDEIATSLDNQQKSALLVQL 1745

Query: 892  HTLVDRGNSIIVIEHNLEVIKTADWILDFGPEGGDGGGEIIASGPPEAIA 941
             TLV  G+S+I I+H+  ++K AD++++ GP  G  GG+I+ SGPP+ I+
Sbjct: 1746 RTLVSLGHSVIYIDHDPALLKQADYLIEMGPGSGKTGGKILFSGPPKDIS 1795