RPSBLAST alignment for GI: 254780184 and conserved domain: PRK00635
>gnl|CDD|167016 PRK00635, PRK00635, excinuclease ABC subunit A; Provisional. Length = 1809
Score = 353 bits (908), Expect = 1e-97
Identities = 262/950 (27%), Positives = 441/950 (46%), Gaps = 102/950 (10%)
Query: 3 KIKNISIRGAREHNLQNISIELPRNKLIVMTGVSGSGKSSLAFDTIHAEGQRRYVESLST 62
+I+I+ A +HNL++I + LPRN L +TG S SGK SL FD ++A G Y E
Sbjct: 937 VPADITIKNAYQHNLKHIDLSLPRNALTAVTGPSASGKHSLVFDILYAAGNIAYAELFPP 996
Query: 63 YARQFLGTIKK---PDVEQIDGLSPTISIEQKNTSHNPRSTVGTITEIHDYLRLLFARIG 119
Y RQ L IKK P V+++ GLSP I+IE+ + S N +V + EI + L LFAR+G
Sbjct: 997 YIRQAL--IKKTPLPSVDKVTGLSPVIAIEKTSASKNSNHSVASALEISNGLEKLFARLG 1054
Query: 120 IPHSPTTGLPIESQTISQMADRLLSFEQGTRMYLLAPIVRNRKGEYKKELAEILKKGFQR 179
P+SP +G + T +A+ LL+ + + +PI ++ + L E LK+GF +
Sbjct: 1055 HPYSPLSGDALRKITPQTIAEELLTHYTKGYVTITSPI--PKEEDLFIYLQEKLKEGFLK 1112
Query: 180 VQIDGVFYHISDAPDLDKKYKHTIEVVVDRIVV-HENIRERIVNSLRTCLQLTNGLAIAT 238
+ + FY DLD+ ++E IV+ H I E+ ++SL + L L L+
Sbjct: 1113 LYANEQFY------DLDEPLPTSLENPA--IVIQHTKISEKNLSSLLSSLTLAFSLS--- 1161
Query: 239 IADSTFHNDEKTSPNLS-HNSSDHILFSENLSCPVS-GFSIAEIEPRIFSFNNPAGACHH 296
+S L + + + L S G I + S ++ G C
Sbjct: 1162 -----------SSICLHIEYAGTSLSLTYRLGWQDSSGNLYPNITTPLLSRDHEEGLCPL 1210
Query: 297 CDGLGTRQKVDEKLVIPNSKLALNNGAIAPWSNPLSAYHTNILTALGKDLGFSINDSWDL 356
C G G K ++P+ + + ++ ++ + L K+LG +
Sbjct: 1211 CHGKGFILKCS---LLPHKEKIAHYTPLSLFTLFFPNQDPKPVYPLLKELGIPSIALFQE 1267
Query: 357 LSNENQQILLYGTKKNSIALARHKKSSYSNLSFRGIIPTLEKRWSEADSSLLQEIIQRYM 416
L + + L GT+++ ++ +E E++ L +I
Sbjct: 1268 LDTLSFESLCLGTQQH--------------PGLNALL--MEAMLMESEEPLPPPLI---- 1307
Query: 417 SSSPCTICHGYRLKDESLAVKIAGKHIGEIADMSIKKAQIWFEQ--LPTQITQKANKISE 474
S +PC C G + + V+I + I + + F + L T +
Sbjct: 1308 SKTPCNQCQGLGVYTYAHCVRI-----HNTSLSDIYQEDVTFLKKFLLTIHDDEE----P 1358
Query: 475 SILKEIQKRIHFLVEIGLDYLTLSRNSNMLSNGESQRIRLASQIGSALTGVLYILDEPSI 534
SI++++ R+ F+ ++GL Y+TL + + LS+GE R+ LA +I S LT ++Y+L++P
Sbjct: 1359 SIIQDLLNRLTFIDKVGLSYITLGQEQDTLSDGEHYRLHLAKKISSNLTDIIYLLEDPLS 1418
Query: 535 GLHQRDNTKLINTLKHLRDTGNTVIVVEHDEETMLAADHIVDIGPEAGINGGKIVAEGSP 594
GLH +D L+ +K L NTVI + ADH++ +GP +G GG
Sbjct: 1419 GLHPQDAPTLLQLIKELVTNNNTVIATDRSGSLAEHADHLIHLGPGSGPQGG-------- 1470
Query: 595 SQIIAHPTSLTGKYMSGKMSIKI--PEKRRQYNPNRMIHV-INARSNNLKNVTGSIPLGL 651
Y+ ++K P+ + + ++ + ++N+ S PL
Sbjct: 1471 -------------YLLSTSALKQSQPDLHNTRSSEETPTLSVSLSIHTIQNLNVSAPLHS 1517
Query: 652 FTAITGISGGGKSTFLISTLYKAAARIIMGSKYNPGIYDRIDGLEYIDKVVSINQSPIGH 711
AI+G+SG GK++ L+ YK A +I G +++ ++ P
Sbjct: 1518 LVAISGVSGSGKTSLLLEGFYKQACALIE------------KGPSVFSEIIFLDSHPQIS 1565
Query: 712 TPRSNPATYVGAFTPIRDLFSNLPESKACGYKAGCFSFNVKGGRCEVCEGNGVIKIAMHF 771
+ RS+ +TY +R+ +++L ++KA A FS N K G+C C G G I F
Sbjct: 1566 SQRSDISTYFDIAPSLRNFYASLTQAKALNISASMFSTNTKQGQCSDCWGLGYQWIDRAF 1625
Query: 772 LPDVYITCDVCQGQRYNPETLQIRFKDKSIADVLSMTVDESLDFFAAIPTIHNKLTTLKE 831
C C G R P ++ ++ K +L ++E + F + I L L +
Sbjct: 1626 YALEKRPCPTCSGFRIQPLAQEVVYEGKHFGQLLQTPIEEVAETFPFLKKIQKPLQALID 1685
Query: 832 VGLGYIKIGQSANTLSGGESQRVKLAKELSKQATGNTLYILDEPTTGLHYHDIAKLLNIL 891
GLGY+ +GQ+ ++LS E +K+AK L TL++LDE T L + LL L
Sbjct: 1686 NGLGYLPLGQNLSSLSLSEKIAIKIAKFLYLPPKHPTLFLLDEIATSLDNQQKSALLVQL 1745
Query: 892 HTLVDRGNSIIVIEHNLEVIKTADWILDFGPEGGDGGGEIIASGPPEAIA 941
TLV G+S+I I+H+ ++K AD++++ GP G GG+I+ SGPP+ I+
Sbjct: 1746 RTLVSLGHSVIYIDHDPALLKQADYLIEMGPGSGKTGGKILFSGPPKDIS 1795