RPSBLAST alignment for GI: 254780184 and conserved domain: PRK00349
>gnl|CDD|178984 PRK00349, uvrA, excinuclease ABC subunit A; Reviewed. Length = 943
Score = 1728 bits (4479), Expect = 0.0
Identities = 572/956 (59%), Positives = 740/956 (77%), Gaps = 20/956 (2%)
Query: 5 KNISIRGAREHNLQNISIELPRNKLIVMTGVSGSGKSSLAFDTIHAEGQRRYVESLSTYA 64
I IRGAREHNL+NI +++PR+KL+V TG+SGSGKSSLAFDTI+AEGQRRYVESLS YA
Sbjct: 4 DKIIIRGAREHNLKNIDLDIPRDKLVVFTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYA 63
Query: 65 RQFLGTIKKPDVEQIDGLSPTISIEQKNTSHNPRSTVGTITEIHDYLRLLFARIGIPHSP 124
RQFLG + KPDV+ I+GLSP ISI+QK TSHNPRSTVGT+TEI+DYLRLL+AR+G PH P
Sbjct: 64 RQFLGQMDKPDVDSIEGLSPAISIDQKTTSHNPRSTVGTVTEIYDYLRLLYARVGKPHCP 123
Query: 125 TTGLPIESQTISQMADRLLSFEQGTRMYLLAPIVRNRKGEYKKELAEILKKGFQRVQIDG 184
G PIE+QT+SQM DR+L +GTR+ +LAP+VR RKGE+KK L + K+GF RV++DG
Sbjct: 124 NCGRPIEAQTVSQMVDRVLELPEGTRLQILAPVVRGRKGEHKKLLENLRKQGFVRVRVDG 183
Query: 185 VFYHISDAPDLDKKYKHTIEVVVDRIVVHENIRERIVNSLRTCLQLTNGLAIATIADSTF 244
Y + + P LDK KHTIEVVVDR+VV E+IR+R+ +S+ T L+L++GL + + D
Sbjct: 184 EVYDLDEPPKLDKNKKHTIEVVVDRLVVKEDIRQRLADSIETALKLSDGLVVVEVMDDPE 243
Query: 245 HNDEKTSPNLSHNSSDHILFSENLSCPVSGFSIAEIEPRIFSFNNPAGACHHCDGLGTRQ 304
+ +LFSE +CPV GFSI E+EPR+FSFN+P GAC CDGLG +
Sbjct: 244 AEE--------------LLFSEKFACPVCGFSIPELEPRLFSFNSPYGACPTCDGLGVKL 289
Query: 305 KVDEKLVIPNSKLALNNGAIAPWSNPLSAYHTNILTALGKDLGFSINDSWDLLSNENQQI 364
+ D LV+P+ +L+L GAIAPWS S+Y+ +L +L + GF ++ W L E Q I
Sbjct: 290 EFDPDLVVPDPELSLAEGAIAPWSRSSSSYYFQMLKSLAEHYGFDLDTPWKDLPEEVQDI 349
Query: 365 LLYGTKKNSIALA---RHKKSSYSNLSFRGIIPTLEKRWSEADSSLLQEIIQRYMSSSPC 421
+LYG+ I ++ F G+IP LE+R+ E +S ++E +++YMS PC
Sbjct: 350 ILYGSGDEEIEFRYKNDRGRTRERKHPFEGVIPNLERRYRETESEYVREELEKYMSERPC 409
Query: 422 TICHGYRLKDESLAVKIAGKHIGEIADMSIKKAQIWFEQLPTQITQKANKISESILKEIQ 481
C G RLK E+LAVK+ GK+IGE++++SI +A +FE L +++++ KI+E ILKEI+
Sbjct: 410 PSCKGKRLKPEALAVKVGGKNIGEVSELSIGEALEFFENL--KLSEQEAKIAEPILKEIR 467
Query: 482 KRIHFLVEIGLDYLTLSRNSNMLSNGESQRIRLASQIGSALTGVLYILDEPSIGLHQRDN 541
+R+ FLV++GLDYLTLSR++ LS GE+QRIRLA+QIGS LTGVLY+LDEPSIGLHQRDN
Sbjct: 468 ERLKFLVDVGLDYLTLSRSAGTLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDN 527
Query: 542 TKLINTLKHLRDTGNTVIVVEHDEETMLAADHIVDIGPEAGINGGKIVAEGSPSQIIAHP 601
+LI TLKHLRD GNT+IVVEHDE+T+ AAD+IVDIGP AG++GG++VA G+P +I+ +P
Sbjct: 528 DRLIETLKHLRDLGNTLIVVEHDEDTIRAADYIVDIGPGAGVHGGEVVASGTPEEIMKNP 587
Query: 602 TSLTGKYMSGKMSIKIPEKRRQYNPNRMIHVINARSNNLKNVTGSIPLGLFTAITGISGG 661
SLTG+Y+SGK I++P++RR+ + + + AR NNLKNV IPLG FT +TG+SG
Sbjct: 588 NSLTGQYLSGKKKIEVPKERRK-GNGKFLKLKGARENNLKNVDVEIPLGKFTCVTGVSGS 646
Query: 662 GKSTFLISTLYKAAARIIMGSKYNPGIYDRIDGLEYIDKVVSINQSPIGHTPRSNPATYV 721
GKST + TLYKA AR + G+K PG + I+GLE++DKV+ I+QSPIG TPRSNPATY
Sbjct: 647 GKSTLINETLYKALARKLNGAKKVPGKHKEIEGLEHLDKVIDIDQSPIGRTPRSNPATYT 706
Query: 722 GAFTPIRDLFSNLPESKACGYKAGCFSFNVKGGRCEVCEGNGVIKIAMHFLPDVYITCDV 781
G F PIR+LF+ PE+KA GYK G FSFNVKGGRCE C+G+GVIKI MHFLPDVY+ CDV
Sbjct: 707 GVFDPIRELFAGTPEAKARGYKPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVPCDV 766
Query: 782 CQGQRYNPETLQIRFKDKSIADVLSMTVDESLDFFAAIPTIHNKLTTLKEVGLGYIKIGQ 841
C+G+RYN ETL++++K K+IADVL MTV+E+L+FF AIP I KL TL +VGLGYIK+GQ
Sbjct: 767 CKGKRYNRETLEVKYKGKNIADVLDMTVEEALEFFEAIPKIARKLQTLVDVGLGYIKLGQ 826
Query: 842 SANTLSGGESQRVKLAKELSKQATGNTLYILDEPTTGLHYHDIAKLLNILHTLVDRGNSI 901
A TLSGGE+QRVKLAKELSK++TG TLYILDEPTTGLH+ DI KLL +LH LVD+GN++
Sbjct: 827 PATTLSGGEAQRVKLAKELSKRSTGKTLYILDEPTTGLHFEDIRKLLEVLHRLVDKGNTV 886
Query: 902 IVIEHNLEVIKTADWILDFGPEGGDGGGEIIASGPPEAIAKEPLSYTGKFLKSILK 957
+VIEHNL+VIKTADWI+D GPEGGDGGGEI+A+G PE +AK SYTG++LK +L+
Sbjct: 887 VVIEHNLDVIKTADWIIDLGPEGGDGGGEIVATGTPEEVAKVEASYTGRYLKPVLE 942