RPSBLAST alignment for GI: 254780184 and conserved domain: cd03224
>gnl|CDD|72983 cd03224, ABC_TM1139_LivF_branched, LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.. Length = 222
Score = 51.6 bits (124), Expect = 1e-06
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 11/106 (10%)
Query: 497 LSRNSNMLSNGESQRIRLASQIGSALTG--VLYILDEPSIGLHQRDNTKLINTLKHLRDT 554
+ + LS GE Q LA I AL L +LDEPS GL + ++ ++ LRD
Sbjct: 126 RKQLAGTLSGGEQQM--LA--IARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRDE 181
Query: 555 GNTVIVVEHDEETMLAADHIVDIGPEAGINGGKIVAEGSPSQIIAH 600
G T+++VE + A I D + G++V EG+ ++++A
Sbjct: 182 GVTILLVEQN---ARFALEIADRA--YVLERGRVVLEGTAAELLAD 222