HHsearch alignment of GI: 254780185 and MMDB domain: 2d3a_A_105-356
>2d3a_A (A:105-356) Glutamine synthetase; ligase; HET: P3S ADP; 2.63A {Zea mays} PDB: 2d3b_A* 2d3c_A*
Probab=100.00 E-value=0 Score=484.15 Aligned_cols=246 Identities=16% Similarity=0.156 Sum_probs=215.1
Q ss_pred HHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHH
Q ss_conf 55532355679987303452257731330899706777778654776667654577777750036554556355244468
Q gi|254780185|r 105 DPRYTAQKAIDYLQTTDIGDTLLLGITTEFFVFDNVHCTISPIKSGFALESTEFLQNGNNKGYDSHAKSSYTLPPQDKLH 184 (458)
Q Consensus 105 ~PR~~Lk~~~~~l~~~~~G~~~~~g~E~EF~Lf~~~~~~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~~y~~~~~~~~~ 184 (458)
|||++|||+++++++ .|+++++|+|+|||||+++.....+... ...+.......+|++.+.+...
T Consensus 1 DPR~~L~~~~~~~~~--~G~~~~~g~E~EF~l~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~ 65 (252)
T 2d3a_A 1 NKRYSAAKIFSSPEV--AAEEPWYGIEQEYTLLQKDTNWPLGWPI-------------GGFPGPQGPYYCGIGAEKSFGR 65 (252)
T ss_dssp CCHHHHHHHHHSHHH--HHHCCEEEEEEEEEEEETTTCCBTTSCT-------------TSBCSCSSSCTTCCSTTTCCCH
T ss_pred CCHHHHHHHHHHHHH--CCCCEEECCCEEEEEEECCCCCCCCCCC-------------CCCCCCCCCCCCCCCCHHHHHH
T ss_conf 627889999999874--6980676141389985135678887654-------------5787544675455431001336
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCC-CCCHHH
Q ss_conf 9999999999860541122213356212103655566888776999999999999874497544412101456-860120
Q gi|254780185|r 185 DMRSEIVSALNNIGVQITKYHNQINDAQHSFGLQSESLLHASDNLQKYKYSVHQVANSYCKIATFMPKPIASH-NGSGMY 263 (458)
Q Consensus 185 ~~~~ei~~~l~~~Gi~ie~~h~E~gpGQ~Ei~~~~~~~l~aAD~~~~~k~~ik~iA~~~G~~ATFmpKP~~~~-~GsG~H 263 (458)
++++++++.|+++||+|+++|+|+|||||||++.|++++++||+++++|++||+||.+||+.|||||||+.+. .|||+|
T Consensus 66 ~~~~~i~~~l~~~Gi~v~~~~~E~g~gQ~Ei~l~~~~~l~aaD~~~~~r~~ik~vA~~hgl~atFmpKP~~~~~~~~~~h 145 (252)
T 2d3a_A 66 DIVDAHYKACLYAGINISGINGEVMPGQWEFQVGPSVGISSGDQVWVARYILERITEIAGVVVTFDPKPIPGDWNGAGAH 145 (252)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEECSSTTEEEEEEEEEETHHHHHHHHHHHHHHHHHHHHHTEEEECCSCSSCSSSCCCBEE
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCHHCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEE
T ss_conf 78999998776316453422236688637998621410012148999999999999982988996204555777777027
Q ss_pred HHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHCCC--CCCCEEEEECCCCCCCEEECCC
Q ss_conf 11111146763122155565789999999999988641000006670014431888--5212010113688764010257
Q gi|254780185|r 264 LNMSIHKGEKAIFTGNQHDRVSLKGLYYLGGIIKHAKSLNALTNASTNSYKRLLTD--SQSPTKLTYSTHNHSASCRIPY 341 (458)
Q Consensus 264 ih~Sl~~~~~n~f~~~~~~~ls~~~~~fiaGil~h~~al~a~~~PtvNSYkRl~p~--~~ap~~~~WG~~NR~a~iRip~ 341 (458)
+|+|+|+.+++. ....++++||+.|+++++++++|++|||+||+++ +|||+++|||.+||+++||||.
T Consensus 146 ~h~s~~~~~~~~----------~~~~~~~~~i~~~~~~~~a~~a~~~~sy~r~~~~~~~~ap~~~~WG~~NR~~~vRv~~ 215 (252)
T 2d3a_A 146 TNYSTESMRKEG----------GYEVIKAAIEKLKLRHKEHIAAYGEGNERRLTGRHETADINTFSWGVANRGASVRVGR 215 (252)
T ss_dssp EEEECTTTSSTT----------HHHHHHHHHHHHHHTHHHHHTTSCTTHHHHCSSSSSCCCTTCCCEESSCTTSSEECCH
T ss_pred EEECCCCCCCCC----------CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCEEECCCCCEEEEECC
T ss_conf 640121356542----------2355899999988867888722578606654698657887732772467877798577
Q ss_pred CC-CCCCCEEEECCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 88-76541244046753212799999999999987
Q gi|254780185|r 342 EN-KSDNKSIEIRFPDLSANPYLAPAAILMAGLDG 375 (458)
Q Consensus 342 ~~-~~~~~riE~R~~da~aNPYL~lAailaAgl~G 375 (458)
.+ +++++|||+|++|++|||||++|++|+||||-
T Consensus 216 ~~~~~~~~r~E~R~~d~~aNPYl~laa~laagLdp 250 (252)
T 2d3a_A 216 ETEQNGKGYFEDRRPASNMDPYVVTSMIAETTIVW 250 (252)
T ss_dssp HHHHTTCCCEEECCCBTTCCHHHHHHHHHHHHTTC
T ss_pred CCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCC
T ss_conf 77878762899798778778999999999975648