HHsearch results for GI: 254780185 and protein with PDBid: 1f52_A

>1f52_A Glutamine synthetase; ADP, MPD, ligase; HET: ADP; 2.49A {Salmonella typhimurium} SCOP: d.15.9.1 d.128.1.1 PDB: 1f1h_A* 1fpy_A* 1lgr_A* 2lgs_A* 2gls_A
Probab=100.00  E-value=0  Score=934.38  Aligned_cols=455  Identities=43%  Similarity=0.745  Sum_probs=408.4

Q ss_pred             CHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEEHHHHHHHHHHCCCCCCCCCHHCCCC-CCCCEEEEEECCCCEECCCC
Q ss_conf             98999999985798399999978998252378778783055884598456651002468-99888999641105877568
Q gi|254780185|r    4 KATSIIQKIAQEKVKFIDLRFTDLQGKFRHISMNVSLFNENTLLNGITFDSSSIDGWHS-KHPNLLLIPDIETMHMDPFY   82 (458)
Q Consensus         4 ~~~~i~~~l~~~~I~~V~~~~~Dl~G~~R~k~ip~~~f~~~~~~~G~~fd~s~i~g~~~-~~~D~~l~PD~~T~~~~Pw~   82 (458)
                      ++++|+++|++++|+||+++|+|++|++|+|.||++.|.+.++.+|++||+|++.||.. +++|++++||++|++++||.
T Consensus         1 s~e~v~~~l~~~~i~~V~~~~~Dl~G~~R~k~ip~~~~~~~~~~~G~~fdgssi~g~~~~~~sD~~l~PD~sT~~~~Pw~   80 (468)
T 1f52_A            1 SAEHVLTMLNEHEVKFVDLRFTDTKGKEQHVTIPAHQVNAEFFEEGKMFDGSSIGGWKGINESDMVLMPDASTAVIDPFF   80 (468)
T ss_dssp             CHHHHHHHHHHTTCCEEEEEEECTTSCEEEEEEEGGGCCHHHHHHCEEEEGGGSTTSCCSSCCEEEEEECGGGCEECSSC
T ss_pred             CHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCC
T ss_conf             97999999998898399999999999878999829997699985898656225257677998898999827840889868


Q ss_pred             CCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCC----
Q ss_conf             9722799852014754485302555323556799873034522577313308997067777786547766676545----
Q gi|254780185|r   83 AQSTVAFICNVYDPITLQPYNRDPRYTAQKAIDYLQTTDIGDTLLLGITTEFFVFDNVHCTISPIKSGFALESTEF----  158 (458)
Q Consensus        83 ~~~~~~v~~d~~~~~~g~P~~~~PR~~Lk~~~~~l~~~~~G~~~~~g~E~EF~Lf~~~~~~~~p~~~~~~~~~~~~----  158 (458)
                      ++++++|+||++.+.++.|+..|||++|+++++++++.+++..+.+|+|+|||+|+.............+....+.    
T Consensus        81 ~~~~~~v~cd~~~~~~~~p~~~~PR~~l~~~~~~~~~~G~~~~~~~~~E~ef~l~~~~~~~~~~~~~~~~~~~~e~~~~~  160 (468)
T 1f52_A           81 ADSTLIIRCDILEPGTLQGYDRDPRSIAKRAEDYLRATGIADTVLFGPEPEFFLFDDIRFGASISGSHVAIDDIEGAWNS  160 (468)
T ss_dssp             SSCEEEEEEEEECTTTCCCCTTCHHHHHHHHHHHHHHHTSCSEEEEEEEEEEEEESEEEEEEETTEEEEEEECTTCGGGG
T ss_pred             CCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             98628999998636767887788558999999999875996423414556999631433467878874545762224577


Q ss_pred             --CCCCCCCEEC-CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC-CHHHCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             --7777775003-65545563552444689999999999860541122213356-2121036555668887769999999
Q gi|254780185|r  159 --LQNGNNKGYD-SHAKSSYTLPPQDKLHDMRSEIVSALNNIGVQITKYHNQIN-DAQHSFGLQSESLLHASDNLQKYKY  234 (458)
Q Consensus       159 --~~~~~~~g~~-~~~~~~y~~~~~~~~~~~~~ei~~~l~~~Gi~ie~~h~E~g-pGQ~Ei~~~~~~~l~aAD~~~~~k~  234 (458)
                        ....++.++. ....++|++.+.+...++++++++.|+++||+|+++|+|+| +||+||++.|+++|+|||+++++|+
T Consensus       161 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~gi~ve~~~~E~~~~GQ~Ei~~~~~d~L~aAD~~~~~K~  240 (468)
T 1f52_A          161 STKYEGGNKGHRPGVKGGYFPVPPVDSAQDIRSEMCLVMEQMGLVVEAHHHEVATAGQNEVATRFNTMTKKADEIQIYKY  240 (468)
T ss_dssp             GCCCTTCCCCCCCCTTCCSSBCTTSSCCHHHHHHHHHHHHHTTCCEEEEEECSSTTTEEEEEECCEEHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHH
T ss_conf             87666788675104788712326642067799999999997398721101265678618870567755554679999999


Q ss_pred             HHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHCCHHCCCCCHHHH
Q ss_conf             99999874497544412101456860120111111467631221555657899999999999886410000066700144
Q gi|254780185|r  235 SVHQVANSYCKIATFMPKPIASHNGSGMYLNMSIHKGEKAIFTGNQHDRVSLKGLYYLGGIIKHAKSLNALTNASTNSYK  314 (458)
Q Consensus       235 ~ik~iA~~~G~~ATFmpKP~~~~~GsG~Hih~Sl~~~~~n~f~~~~~~~ls~~~~~fiaGil~h~~al~a~~~PtvNSYk  314 (458)
                      +||+||++||++|||||||+.+.+|||||+|+|||++|+|+|+++++.+||.++++||||||+|+|+++||+|||+||||
T Consensus       241 ~vk~iA~~~Gl~ATFmpKP~~~~~GsG~H~H~Sl~~~g~n~f~~~~~~~lS~~~~~~iaGlL~h~~~l~a~~~PtvNSYk  320 (468)
T 1f52_A          241 VVHNVAHRFGKTATFMPKPMFGDNGSGMHCHMSLAKNGTNLFSGDKYAGLSEQALYYIGGVIKHAKAINALANPTTNSYK  320 (468)
T ss_dssp             HHHHHHHHTTCEEECCSCSSTTSCCCCEEEEEEEEETTEETTBCSSGGGBCHHHHHHHHHHHHTHHHHHHHHSCSGGGGG
T ss_pred             HHHHHHHHCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHC
T ss_conf             99999996196468840126888887437999835899606689887772899999999999863766605558815641


Q ss_pred             HHCCCCCCCEEEEECCCCCCCEEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH--
Q ss_conf             318885212010113688764010257887654124404675321279999999999998788559998665578877--
Q gi|254780185|r  315 RLLTDSQSPTKLTYSTHNHSASCRIPYENKSDNKSIEIRFPDLSANPYLAPAAILMAGLDGIAKKIHPGKNIDELSLE--  392 (458)
Q Consensus       315 Rl~p~~~ap~~~~WG~~NR~a~iRip~~~~~~~~riE~R~~da~aNPYL~lAailaAgl~Gi~~~l~p~~~~~~~~~~--  392 (458)
                      ||+|++|||+++|||.+||+++||||..++++++|||+|++|++|||||++||+|+|||+||+++++|++|+.+++++  
T Consensus       321 Rl~p~~~AP~~~~WG~~NR~~~iRip~~~~~~~~riE~R~~da~aNPYL~lAa~laagl~Gi~~~l~p~~p~~~~~~~~~  400 (468)
T 1f52_A          321 RLVPGYEAPVMLAYSARNRSASIRIPVVASPKARRIEVRFPDPAANPYLCFAALLMAGLDGIKNKIHPGEPMDKNLYDLP  400 (468)
T ss_dssp             TSSSCSSCCCEEEEESSCTTEEEECCCCSCGGGCCEEECCCCTTSCHHHHHHHHHHHHHHHHHTTCCCCSCCCSCCSSSC
T ss_pred             CCCCCCCCCCCCEECCCCCCEEEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCC
T ss_conf             67898758863352222584207815578987615784379987698999999999999999837999986778814499


Q ss_pred             --HHHCCCCCCCCHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC
Q ss_conf             --771320001798999999873989898413378899999999999999999659997899863579
Q gi|254780185|r  393 --EQNTIPRICISLRESLENLDKDREFLKVGNVFDDDQIDAFINLKMKEVLKLESSPSPVEFEMYCSI  458 (458)
Q Consensus       393 --~~~~~~~LP~~L~eAl~~l~~d~~~~~~~~~lG~~~v~~~~~~K~~E~~~~~~~vt~wE~~~Y~~~  458 (458)
                        +...+++||+||.|||++|++|+++++..++||++||+.|+++||+||++|++.||+||+++||+|
T Consensus       401 ~~~~~~~~~LP~sl~eAl~~l~~d~~~~~a~~~fg~~~v~~~~~~K~~E~~~~~~~vt~wE~~~Y~~~  468 (468)
T 1f52_A          401 PEEAKEIPQVAGSLEEALNALDLDREFLKAGGVFTDEAIDAYIALRREEDDRVRMTPHPVEFELYYSV  468 (468)
T ss_dssp             CSSTTCCCBCCSSHHHHHHHHHHTCHHHHGGGSSCHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHTTC
T ss_pred             HHHHHCHHCCCCCHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC
T ss_conf             86761310161379999999973969888655156999999999999999999779999999740689