HHsearch results for GI: 254780185 and protein with PDBid: 1f52_A
>1f52_A Glutamine synthetase; ADP, MPD, ligase; HET: ADP; 2.49A {Salmonella typhimurium} SCOP: d.15.9.1 d.128.1.1 PDB: 1f1h_A* 1fpy_A* 1lgr_A* 2lgs_A* 2gls_A
Probab=100.00 E-value=0 Score=934.38 Aligned_cols=455 Identities=43% Similarity=0.745 Sum_probs=408.4
Q ss_pred CHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEEHHHHHHHHHHCCCCCCCCCHHCCCC-CCCCEEEEEECCCCEECCCC
Q ss_conf 98999999985798399999978998252378778783055884598456651002468-99888999641105877568
Q gi|254780185|r 4 KATSIIQKIAQEKVKFIDLRFTDLQGKFRHISMNVSLFNENTLLNGITFDSSSIDGWHS-KHPNLLLIPDIETMHMDPFY 82 (458)
Q Consensus 4 ~~~~i~~~l~~~~I~~V~~~~~Dl~G~~R~k~ip~~~f~~~~~~~G~~fd~s~i~g~~~-~~~D~~l~PD~~T~~~~Pw~ 82 (458)
++++|+++|++++|+||+++|+|++|++|+|.||++.|.+.++.+|++||+|++.||.. +++|++++||++|++++||.
T Consensus 1 s~e~v~~~l~~~~i~~V~~~~~Dl~G~~R~k~ip~~~~~~~~~~~G~~fdgssi~g~~~~~~sD~~l~PD~sT~~~~Pw~ 80 (468)
T 1f52_A 1 SAEHVLTMLNEHEVKFVDLRFTDTKGKEQHVTIPAHQVNAEFFEEGKMFDGSSIGGWKGINESDMVLMPDASTAVIDPFF 80 (468)
T ss_dssp CHHHHHHHHHHTTCCEEEEEEECTTSCEEEEEEEGGGCCHHHHHHCEEEEGGGSTTSCCSSCCEEEEEECGGGCEECSSC
T ss_pred CHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCC
T ss_conf 97999999998898399999999999878999829997699985898656225257677998898999827840889868
Q ss_pred CCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCC----
Q ss_conf 9722799852014754485302555323556799873034522577313308997067777786547766676545----
Q gi|254780185|r 83 AQSTVAFICNVYDPITLQPYNRDPRYTAQKAIDYLQTTDIGDTLLLGITTEFFVFDNVHCTISPIKSGFALESTEF---- 158 (458)
Q Consensus 83 ~~~~~~v~~d~~~~~~g~P~~~~PR~~Lk~~~~~l~~~~~G~~~~~g~E~EF~Lf~~~~~~~~p~~~~~~~~~~~~---- 158 (458)
++++++|+||++.+.++.|+..|||++|+++++++++.+++..+.+|+|+|||+|+.............+....+.
T Consensus 81 ~~~~~~v~cd~~~~~~~~p~~~~PR~~l~~~~~~~~~~G~~~~~~~~~E~ef~l~~~~~~~~~~~~~~~~~~~~e~~~~~ 160 (468)
T 1f52_A 81 ADSTLIIRCDILEPGTLQGYDRDPRSIAKRAEDYLRATGIADTVLFGPEPEFFLFDDIRFGASISGSHVAIDDIEGAWNS 160 (468)
T ss_dssp SSCEEEEEEEEECTTTCCCCTTCHHHHHHHHHHHHHHHTSCSEEEEEEEEEEEEESEEEEEEETTEEEEEEECTTCGGGG
T ss_pred CCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 98628999998636767887788558999999999875996423414556999631433467878874545762224577
Q ss_pred --CCCCCCCEEC-CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC-CHHHCCCCCCCCHHHHHHHHHHHHH
Q ss_conf --7777775003-65545563552444689999999999860541122213356-2121036555668887769999999
Q gi|254780185|r 159 --LQNGNNKGYD-SHAKSSYTLPPQDKLHDMRSEIVSALNNIGVQITKYHNQIN-DAQHSFGLQSESLLHASDNLQKYKY 234 (458)
Q Consensus 159 --~~~~~~~g~~-~~~~~~y~~~~~~~~~~~~~ei~~~l~~~Gi~ie~~h~E~g-pGQ~Ei~~~~~~~l~aAD~~~~~k~ 234 (458)
....++.++. ....++|++.+.+...++++++++.|+++||+|+++|+|+| +||+||++.|+++|+|||+++++|+
T Consensus 161 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~gi~ve~~~~E~~~~GQ~Ei~~~~~d~L~aAD~~~~~K~ 240 (468)
T 1f52_A 161 STKYEGGNKGHRPGVKGGYFPVPPVDSAQDIRSEMCLVMEQMGLVVEAHHHEVATAGQNEVATRFNTMTKKADEIQIYKY 240 (468)
T ss_dssp GCCCTTCCCCCCCCTTCCSSBCTTSSCCHHHHHHHHHHHHHTTCCEEEEEECSSTTTEEEEEECCEEHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 87666788675104788712326642067799999999997398721101265678618870567755554679999999
Q ss_pred HHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHCCHHCCCCCHHHH
Q ss_conf 99999874497544412101456860120111111467631221555657899999999999886410000066700144
Q gi|254780185|r 235 SVHQVANSYCKIATFMPKPIASHNGSGMYLNMSIHKGEKAIFTGNQHDRVSLKGLYYLGGIIKHAKSLNALTNASTNSYK 314 (458)
Q Consensus 235 ~ik~iA~~~G~~ATFmpKP~~~~~GsG~Hih~Sl~~~~~n~f~~~~~~~ls~~~~~fiaGil~h~~al~a~~~PtvNSYk 314 (458)
+||+||++||++|||||||+.+.+|||||+|+|||++|+|+|+++++.+||.++++||||||+|+|+++||+|||+||||
T Consensus 241 ~vk~iA~~~Gl~ATFmpKP~~~~~GsG~H~H~Sl~~~g~n~f~~~~~~~lS~~~~~~iaGlL~h~~~l~a~~~PtvNSYk 320 (468)
T 1f52_A 241 VVHNVAHRFGKTATFMPKPMFGDNGSGMHCHMSLAKNGTNLFSGDKYAGLSEQALYYIGGVIKHAKAINALANPTTNSYK 320 (468)
T ss_dssp HHHHHHHHTTCEEECCSCSSTTSCCCCEEEEEEEEETTEETTBCSSGGGBCHHHHHHHHHHHHTHHHHHHHHSCSGGGGG
T ss_pred HHHHHHHHCCCEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHC
T ss_conf 99999996196468840126888887437999835899606689887772899999999999863766605558815641
Q ss_pred HHCCCCCCCEEEEECCCCCCCEEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH--
Q ss_conf 318885212010113688764010257887654124404675321279999999999998788559998665578877--
Q gi|254780185|r 315 RLLTDSQSPTKLTYSTHNHSASCRIPYENKSDNKSIEIRFPDLSANPYLAPAAILMAGLDGIAKKIHPGKNIDELSLE-- 392 (458)
Q Consensus 315 Rl~p~~~ap~~~~WG~~NR~a~iRip~~~~~~~~riE~R~~da~aNPYL~lAailaAgl~Gi~~~l~p~~~~~~~~~~-- 392 (458)
||+|++|||+++|||.+||+++||||..++++++|||+|++|++|||||++||+|+|||+||+++++|++|+.+++++
T Consensus 321 Rl~p~~~AP~~~~WG~~NR~~~iRip~~~~~~~~riE~R~~da~aNPYL~lAa~laagl~Gi~~~l~p~~p~~~~~~~~~ 400 (468)
T 1f52_A 321 RLVPGYEAPVMLAYSARNRSASIRIPVVASPKARRIEVRFPDPAANPYLCFAALLMAGLDGIKNKIHPGEPMDKNLYDLP 400 (468)
T ss_dssp TSSSCSSCCCEEEEESSCTTEEEECCCCSCGGGCCEEECCCCTTSCHHHHHHHHHHHHHHHHHTTCCCCSCCCSCCSSSC
T ss_pred CCCCCCCCCCCCEECCCCCCEEEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCC
T ss_conf 67898758863352222584207815578987615784379987698999999999999999837999986778814499
Q ss_pred --HHHCCCCCCCCHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC
Q ss_conf --771320001798999999873989898413378899999999999999999659997899863579
Q gi|254780185|r 393 --EQNTIPRICISLRESLENLDKDREFLKVGNVFDDDQIDAFINLKMKEVLKLESSPSPVEFEMYCSI 458 (458)
Q Consensus 393 --~~~~~~~LP~~L~eAl~~l~~d~~~~~~~~~lG~~~v~~~~~~K~~E~~~~~~~vt~wE~~~Y~~~ 458 (458)
+...+++||+||.|||++|++|+++++..++||++||+.|+++||+||++|++.||+||+++||+|
T Consensus 401 ~~~~~~~~~LP~sl~eAl~~l~~d~~~~~a~~~fg~~~v~~~~~~K~~E~~~~~~~vt~wE~~~Y~~~ 468 (468)
T 1f52_A 401 PEEAKEIPQVAGSLEEALNALDLDREFLKAGGVFTDEAIDAYIALRREEDDRVRMTPHPVEFELYYSV 468 (468)
T ss_dssp CSSTTCCCBCCSSHHHHHHHHHHTCHHHHGGGSSCHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHTTC
T ss_pred HHHHHCHHCCCCCHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC
T ss_conf 86761310161379999999973969888655156999999999999999999779999999740689