HHSEARCH alignment of GI: 254780185 and SCOP domain: d1f52a1

Alignment

Probab=99.91  E-value=1.1e-24  Score=170.73  Aligned_cols=99  Identities=38%  Similarity=0.743  Sum_probs=93.2

Q ss_pred             CHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEEHHHHHHHHHHCCCCCCCCCHHCCC-CCCCCEEEEEECCCCEECCCC
Q ss_conf             9899999998579839999997899825237877878305588459845665100246-899888999641105877568
Q gi|254780185|r    4 KATSIIQKIAQEKVKFIDLRFTDLQGKFRHISMNVSLFNENTLLNGITFDSSSIDGWH-SKHPNLLLIPDIETMHMDPFY   82 (458)
Q Consensus         4 ~~~~i~~~l~~~~I~~V~~~~~Dl~G~~R~k~ip~~~f~~~~~~~G~~fd~s~i~g~~-~~~~D~~l~PD~~T~~~~Pw~   82 (458)
                      ++++|+++|++++|++|+++|+|++|++|+|.+|+++|.+.++.+|+.||++++.++. .+++||+++||++|++++||.
T Consensus         1 s~e~i~~~i~~~~I~~V~~~F~D~~G~~~~k~ip~~~~~~~~~~~g~~~d~ss~~~~~~~~~sDm~l~PD~~T~~i~Pw~   80 (100)
T d1f52a1           1 SAEHVLTMLNEHEVKFVDLRFTDTKGKEQHVTIPAHQVNAEFFEEGKMFDGSSIGGWKGINESDMVLMPDASTAVIDPFF   80 (100)
T ss_dssp             CHHHHHHHHHHTTCCEEEEEEECTTSCEEEEEEEGGGCCHHHHHHCEEEEGGGSTTSCCSSCCEEEEEECGGGCEECSSC
T ss_pred             CHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEEEHHHHHHHHHCCCCEECCCCHHHHCCCCCCCEEEEECCCCEEECCCC
T ss_conf             98999999998899599999987998666899868996589854683222452111001135748998777806998868


Q ss_pred             CCCEEEEEEEECCCCCCCCC
Q ss_conf             97227998520147544853
Q gi|254780185|r   83 AQSTVAFICNVYDPITLQPY  102 (458)
Q Consensus        83 ~~~~~~v~~d~~~~~~g~P~  102 (458)
                      +++|++|+||++++.+|+||
T Consensus        81 ~~~ta~v~CDv~~p~tg~py  100 (100)
T d1f52a1          81 ADSTLIIRCDILEPGTLQGY  100 (100)
T ss_dssp             SSCEEEEEEEEECTTTCCCC
T ss_pred             CCCEEEEEEEEECCCCCCCC
T ss_conf             99869999998359999979

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: beta-Grasp (ubiquitin-like)
superfamily: Glutamine synthetase, N-terminal domain
family: Glutamine synthetase, N-terminal domain
domain: Glutamine synthetase, N-terminal domain
species: Salmonella typhimurium [TaxId: 90371]