HHSEARCH alignment of GI: 254780185 and SCOP domain: d1r8ga_

Alignment
>d1r8ga_ d.128.1.3 (A:) Carboxylate-amine ligase YbdK {Escherichia coli [TaxId: 562]}
Probab=98.37  E-value=2.9e-06  Score=55.97  Aligned_cols=94  Identities=17%  Similarity=0.194  Sum_probs=63.2

Q ss_pred             CCCCCCCCCHHHCCCCCCC-CHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEE-ECCCC----------------------
Q ss_conf             2221335621210365556-68887769999999999998744975444121-01456----------------------
Q gi|254780185|r  202 TKYHNQINDAQHSFGLQSE-SLLHASDNLQKYKYSVHQVANSYCKIATFMPK-PIASH----------------------  257 (458)
Q Consensus       202 e~~h~E~gpGQ~Ei~~~~~-~~l~aAD~~~~~k~~ik~iA~~~G~~ATFmpK-P~~~~----------------------  257 (458)
                      ..+..|..-+|+|++..|. +.-.+.+.+.-.+..++.++.++|+..-.|+- |+...                      
T Consensus        46 ~~i~~El~~~qiEl~t~p~~~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~g~~P~~~~~~~~~~~~~ry~~~~~~~~~~~  125 (368)
T d1r8ga_          46 GEVKHDITESMLELATDVCRDINQAAGQFSAMQKVVLQAATDHHLEICGGGTHPFQKWQRQEVCDNERYQRTLENFGYLI  125 (368)
T ss_dssp             SEEEECSSSSEEEEECCSBSSHHHHHHHHHHHHHHHHHHHHHTTCEEECCSBCSSCCC----------------CCGGGG
T ss_pred             CCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHH
T ss_conf             86310467766998077779999999999999999999876558752445752126722155775089999987427078


Q ss_pred             ---CCCHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHCCHHCCCC
Q ss_conf             ---8601201111114676312215556578999999999998864100000667
Q gi|254780185|r  258 ---NGSGMYLNMSIHKGEKAIFTGNQHDRVSLKGLYYLGGIIKHAKSLNALTNAS  309 (458)
Q Consensus       258 ---~GsG~Hih~Sl~~~~~n~f~~~~~~~ls~~~~~fiaGil~h~~al~a~~~Pt  309 (458)
                         .-+|+|+|+|+-+.          +    ..-..+--++...|-++|+++-+
T Consensus       126 ~~~~~~g~hv~~~~~d~----------~----~~~~~~~~~~~~~p~l~aL~anS  166 (368)
T d1r8ga_         126 QQATVFGQHVHVGCASG----------D----DAIYLLHGLSRFVPHFIALSAAS  166 (368)
T ss_dssp             CSCCBCEEEEEEECSSH----------H----HHHHHHHHHHTTHHHHHHHHCCB
T ss_pred             HHHHHCCCCEEECCCCH----------H----HHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             88764256031168999----------9----99999999999868998885286


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Glutamine synthetase/guanido kinase
superfamily: Glutamine synthetase/guanido kinase
family: Glutamate-cysteine ligase family 2 (GCS2)
domain: Carboxylate-amine ligase YbdK
species: Escherichia coli [TaxId: 562]