HHsearch alignment of GI: 254780186 and MMDB domain: 2v2f_F_
>2v2f_F (F:) Penicillin binding protein 1A; transpeptidase activity, peptidoglycan synthesis, transferase, hydrolase; HET: MES; 1.9A {Streptococcus pneumoniae} PDB: 2zc6_B* 2zc5_B* 2c6w_B 2c5w_B*
Probab=95.12 E-value=0.15 Score=30.47 Aligned_cols=108 Identities=16% Similarity=0.131 Sum_probs=70.7
Q ss_pred HHHHHCCHHHHHHHHHHHHCCCCCC-------------------CCCCEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHC
Q ss_conf 7300007999999999982597077-------------------788755189999775544541133125667898707
Q gi|254780186|r 193 QCSLMMNCVQLAKSGLYLAFRGYNS-------------------LTNQSVISPLQSRCVNAVMLTCGHYDHSGDFAYRVG 253 (311)
Q Consensus 193 ~Csi~~t~~dLA~~~a~LAn~G~~P-------------------~t~~~vi~~~~~~~v~s~M~TcGmYd~SG~fa~~VG 253 (311)
+=..++|..+||.+.++|||+|+-. ...+|+++++.+..++.+|..--- +..+.-+...|
T Consensus 210 ~g~~~vtplqla~aya~ian~G~~~~P~~i~~i~d~~g~~~~~~~~~~~~~~~~~a~~~~~~l~~vv~-~g~~~~~~~~~ 288 (390)
T 2v2f_F 210 NKQYGASSEKMAAAYAAFANGGIYHKPMYINKVVFSDGSKKEFSDVGTRAMKETTAYMMTEMMKTVLA-YGTGRGAYLPW 288 (390)
T ss_dssp CTTSSCCHHHHHHHHHHHHTTSEECCCBCEEEEEETTSCEEECCCCCEECSCHHHHHHHHHHHHHHHH-TSTTGGGCCTT
T ss_pred CCCCCCCHHHHHHHHHHHCCCCCEECCEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC-CCCCCCCCCCC
T ss_conf 86414589999998764417973541354023333323321012232346889999999998754221-24542013689
Q ss_pred C--CCCCCCCC-------------------EEEEEECCCCEEEEECC------CCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 8--71565221-------------------10334378517998753------2077898489999999999994
Q gi|254780186|r 254 F--PGKSGVGG-------------------GILAIVPSKASIAVWSP------GLDNSGNSLLGAKALELLAIRT 301 (311)
Q Consensus 254 l--PaKSGVgG-------------------gilavvPg~~gIav~SP------~LD~~GNSv~G~~~le~ls~~l 301 (311)
. -+|+|-+- +....--.++.++||-. ..+..|...++-.+-+.+.+-+
T Consensus 289 ~~vaGKTGTa~~~~~~~~~~~~~~~~~~f~~~~~~~~p~~~~~v~v~~~~~~~~~~~~G~~~a~pi~~~i~~~~~ 363 (390)
T 2v2f_F 289 LAQAGKTGTSNYTDDEIEKHIKNTGYVAPDEMFVGYTRKYSMAVWTGYSNRLTPIVGDGFLVAAKVYRSMITYLS 363 (390)
T ss_dssp SCCEEEEEECCCCC-----------CCBSEEEEEEECSSEEEEEEEECSSTTSCBCGGGGGHHHHHHHHHHHHHH
T ss_pred CEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 525557257566666644334556666663599985798799999930788887588740789999999999996