HHsearch results for GI: 254780186 and protein with PDBid: 1m40_A

>1m40_A TEM-1, beta-lactamase TEM; acylation mechanism, ultra- high resolution, hydrolase; HET: CB4; 0.85A {Escherichia coli} SCOP: e.3.1.1 PDB: 1jwp_A* 1nxy_A* 1ny0_A* 1nym_A* 1nyy_A* 1pzo_A* 1erm_A* 1ero_A* 1erq_A* 1s0w_A 1xpb_A 1li0_A 1htz_A 1jtd_A 1esu_A 1jwz_A* 1li9_A 1jwv_A* 1jtg_A 1axb_A* ...
Probab=94.78  E-value=0.24  Score=28.10  Aligned_cols=229  Identities=15%  Similarity=0.151  Sum_probs=112.9

Q ss_pred             HHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHCEEEEEEC-CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCC--H-H
Q ss_conf             99999999997760799999828332059824702899808-997887668786401999999999999996112--8-9
Q gi|254780186|r    5 KIIDGIYEEIKPQIGQGRVADYIPELAKVRIDHFGMSLALE-DGTVYSVGESEFLFSIQSISKVFLLTIALRKFD--E-E   80 (311)
Q Consensus         5 ~~l~~~~~~~~~~~~~G~vA~YIP~La~vdp~~fgiai~t~-dG~~~~~GD~~~~FsiqSisK~f~l~~al~~~G--~-~   80 (311)
                      +.|+++-+..+.. + |+               .|+.+.+. .|+++-.-+.+.+|+..|+.|+++...+|++.-  . .
T Consensus         3 ~~~~~i~~~~~~~-~-~~---------------~~~~v~D~~tg~~l~~~n~d~~~~~AS~~Kl~~~~~~l~~i~~g~l~   65 (263)
T 1m40_A            3 ETLVKVKDAEDQL-G-AR---------------VGYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRVDAGQEQ   65 (263)
T ss_dssp             HHHHHHHHHHHHH-T-SE---------------EEEEEEETTTCCEEEEESTTSCEECGGGHHHHHHHHHHHHHHTTSCC
T ss_pred             HHHHHHHHHHHHC-C-CE---------------EEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             0899999999844-9-85---------------99999999999787778899854457899999999999986527778


Q ss_pred             HHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHH----------HHHHHHHHCCCCCC
Q ss_conf             99994657656772044420114898476311137999998644888889999999----------99999872899862
Q gi|254780186|r   81 IWKRVGREPSGSSFDSIVQLENENGIPRNPFVNAGAIVVSDAVLGSSSADDAIENF----------LNFMRGIAGDASIH  150 (311)
Q Consensus        81 V~~~VG~ePSg~~FNSi~~Le~~~g~P~NPmiNAGAI~~~sli~~~~~~~~~~~~i----------~~~~~~lag~~~i~  150 (311)
                      .-++|-..+......+-. +...   | ++-+.-..+...-++.+.   ....+.+          .++++++ |-....
T Consensus        66 ~~~~i~~~~~~~~~~~~~-~~~~---~-g~~~t~~~ll~~mi~~Sd---N~Aa~~L~~~~gg~~~~~~~~~~~-g~~~~~  136 (263)
T 1m40_A           66 LGRRIHYSQNDLVEYSPV-TEKH---L-TDGMTVRELCSAAITMSD---NTAANLLLTTIGGPKELTAFLHNM-GDHVTR  136 (263)
T ss_dssp             TTCEECCCGGGCCSCCTT-GGGC---T-TTCEEHHHHHHHHHHSCC---HHHHHHHHHHHTSHHHHHHHHHHT-TCSSCC
T ss_pred             CCCEEEEEHHHCCCCCCC-EECC---C-CCCEEHHHHHHHHHHCCC---HHHHHHHHHHHCCCHHHHHHHHHH-CCHHHH
T ss_conf             774799842002379973-0126---8-981649999999886286---799999999846934899999983-546665


Q ss_pred             CCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHH
Q ss_conf             47899998511241279999999827888899899999999873000079999999999825970777887551899997
Q gi|254780186|r  151 IDSVVANSEIETGYRNFALANFVRSYGNIRYKIEDVLKFYFHQCSLMMNCVQLAKSGLYLAFRGYNSLTNQSVISPLQSR  230 (311)
Q Consensus       151 ~d~~v~~SE~~t~~rN~ala~~Lk~~g~~~~dv~~~Ld~Yf~~Csi~~t~~dLA~~~a~LAn~G~~P~t~~~vi~~~~~~  230 (311)
                      ++......                 ....+..           =.-..|.+|++++..-|.++        +.+++....
T Consensus       137 ~~~~~~~~-----------------~~~~~~~-----------~~~~~Ta~d~a~ll~~l~~~--------~~~~~~~~~  180 (263)
T 1m40_A          137 LDRWEPEL-----------------NEAIPND-----------ERDTTTPAAMATTLRKLLTG--------ELLTLASRQ  180 (263)
T ss_dssp             CCCCTTGG-----------------GCCCTTC-----------CTTEECHHHHHHHHHHHHHS--------TTSCHHHHH
T ss_pred             CCCCCCCC-----------------CCCCCCC-----------CCCCCCHHHHHHHHHHHHHC--------CCCCHHHHH
T ss_conf             16887766-----------------6899998-----------76740899999999999838--------846888899


Q ss_pred             HHHHHHHHCCCCHHHHHHHHHHCCC------CCCCCCC----EEEEEE--CC--CCEEEEECCCCCCCCCCHHHHHHHHH
Q ss_conf             7554454113312566789870787------1565221----103343--78--51799875320778984899999999
Q gi|254780186|r  231 CVNAVMLTCGHYDHSGDFAYRVGFP------GKSGVGG----GILAIV--PS--KASIAVWSPGLDNSGNSLLGAKALEL  296 (311)
Q Consensus       231 ~v~s~M~TcGmYd~SG~fa~~VGlP------aKSGVgG----gilavv--Pg--~~gIav~SP~LD~~GNSv~G~~~le~  296 (311)
                      ....+|...--.    .-..+-++|      .|+|-++    .+.+++  +|  ...++++...  ...+.-...+++..
T Consensus       181 ~~~~~~~~~~~~----~~~~~~~~p~~~~v~~KTG~~~~~~~~~~~iv~~~g~~~~ivvv~~~~--~~~~~~~~~~~i~~  254 (263)
T 1m40_A          181 QLIDWMEADKVA----GPLLRSALPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTG--SQATMDERNRQIAE  254 (263)
T ss_dssp             HHHHHHHCCSSC----TTTGGGGCCTTCEEEEEEEECSTTCEEEEEEEESTTCCCEEEEEEEES--CCCCHHHHHHHHHH
T ss_pred             HHHHHHHCCEEC----CHHCCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCEEEEEEEECCC--CCCCHHHHHHHHHH
T ss_conf             999887448136----000012389996488831657788714999999199759999998179--98898999999999


Q ss_pred             HHHHH
Q ss_conf             99994
Q gi|254780186|r  297 LAIRT  301 (311)
Q Consensus       297 ls~~l  301 (311)
                      +++.+
T Consensus       255 i~~~l  259 (263)
T 1m40_A          255 IGASL  259 (263)
T ss_dssp             HHHHH
T ss_pred             HHHHH
T ss_conf             99999