HHSEARCH alignment of GI: 254780186 and SCOP domain: d1nrfa_

Alignment
>d1nrfa_ e.3.1.1 (A:) Penicillin receptor BlaR, C-terminal domain {Bacillus licheniformis [TaxId: 1402]}
Probab=92.82  E-value=0.32  Score=25.79  Aligned_cols=94  Identities=12%  Similarity=0.020  Sum_probs=58.7

Q ss_pred             HHHHHCCHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCC--------EE
Q ss_conf             7300007999999999982597077788755189999775544541133125667898707871565221--------10
Q gi|254780186|r  193 QCSLMMNCVQLAKSGLYLAFRGYNSLTNQSVISPLQSRCVNAVMLTCGHYDHSGDFAYRVGFPGKSGVGG--------GI  264 (311)
Q Consensus       193 ~Csi~~t~~dLA~~~a~LAn~G~~P~t~~~vi~~~~~~~v~s~M~TcGmYd~SG~fa~~VGlPaKSGVgG--------gi  264 (311)
                      +-++.+|..++|.+-+++||+|.       .++++.++.+...|...--.      -+  -+-+|+|-+.        =.
T Consensus       139 ~g~~~~TPlq~a~~~~~ian~G~-------~~~~~~~~~i~~~m~~~~~~------~~--~vagKTGTa~~~~~~~~~WF  203 (246)
T d1nrfa_         139 DGSLQISPLEQVNILKKFYDNEF-------DFKQSNIETVKDSIRLEESN------GR--VLSGKTGTSVINGELHAGWF  203 (246)
T ss_dssp             SSSSCBCHHHHHHHHHHHHHTTT-------CCCHHHHHHHHHHHEEEEET------TE--EEEEEEEEEECSSSCEEEEE
T ss_pred             CCCCCCCHHHHHHHHHHHHCCCC-------CCCHHHHHHHHHHHHHHHHC------EE--CCCCCCCEEECCCCCCCEEE
T ss_conf             88235679999999999975998-------67858999999887654311------02--13542323325899774899


Q ss_pred             EEEECCC---CEEEEECCCCCCCC--CCHHHHHHHHHHHHHHCCC
Q ss_conf             3343785---17998753207789--8489999999999994865
Q gi|254780186|r  265 LAIVPSK---ASIAVWSPGLDNSG--NSLLGAKALELLAIRTGWS  304 (311)
Q Consensus       265 lavvPg~---~gIav~SP~LD~~G--NSv~G~~~le~ls~~l~l~  304 (311)
                      ++.+|..   ..|+|+   +|..+  .+.....+.+.+-+++++.
T Consensus       204 vG~~p~~~p~~~iav~---i~~~~~~~~~~a~~i~~~il~~lgi~  245 (246)
T d1nrfa_         204 IGYVETADNTFFFAVH---IQGEKRAAGSSAAEIALSILDKKGIY  245 (246)
T ss_dssp             EEEEECSSCEEEEEEE---EEESCSCHHHHHHHHHHHHHHHTTSC
T ss_pred             EEEEECCCCEEEEEEE---EECCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf             9999879986999999---97799985189999999999985999


SCOP domain information

class: Multi-domain proteins (alpha and beta)
fold: beta-lactamase/transpeptidase-like
superfamily: beta-lactamase/transpeptidase-like
family: beta-Lactamase/D-ala carboxypeptidase
domain: Penicillin receptor BlaR, C-terminal domain
species: Bacillus licheniformis [TaxId: 1402]