HHSEARCH alignment of GI: 254780186 and SCOP domain: d2bg1a1

Alignment
>d2bg1a1 e.3.1.1 (A:337-789) Penicillin-binding protein 1b, transpeptidase domain {Streptococcus pneumoniae [TaxId: 1313]}
Probab=96.77  E-value=0.0021  Score=39.90  Aligned_cols=84  Identities=13%  Similarity=0.113  Sum_probs=55.6

Q ss_pred             HHHHCCHHHHHHHHHHHHCCCCC--------------------CCCCCEECCHHHHHHHHHHHHHC---CC--CHH---H
Q ss_conf             30000799999999998259707--------------------77887551899997755445411---33--125---6
Q gi|254780186|r  194 CSLMMNCVQLAKSGLYLAFRGYN--------------------SLTNQSVISPLQSRCVNAVMLTC---GH--YDH---S  245 (311)
Q Consensus       194 Csi~~t~~dLA~~~a~LAn~G~~--------------------P~t~~~vi~~~~~~~v~s~M~Tc---Gm--Yd~---S  245 (311)
                      -.+++|..+||.+.++|||+|+.                    ....+|+++++.+..+..+|...   |.  .-.   .
T Consensus       222 g~~~vTplqma~ayatiAN~G~~~~P~~i~~i~d~~G~vi~~~~~~~~~vis~~ta~~~~~~L~~VV~~Gtg~~~~~~~~  301 (453)
T d2bg1a1         222 GGIEVTVAQHTNGYQTLANNGVYHQKHVISKIEAADGRVVYEYQDKPVQVYSKATATIMQGLLREVLSSRVTTTFKSNLT  301 (453)
T ss_dssp             TTCCBCHHHHHHHHHHHHTTTEECCCBSEEEEECTTSCEEEECCCCCEECSCHHHHHHHHHHHHHHHHTCSSCCHHHHHH
T ss_pred             CCCCCEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCC
T ss_conf             31021001112132220269814255011113564323220002222235788899987654565304554310103554


Q ss_pred             HHHHHHHCCC--CCCCCCCE-----EEEEECCCCEEEEEC
Q ss_conf             6789870787--15652211-----033437851799875
Q gi|254780186|r  246 GDFAYRVGFP--GKSGVGGG-----ILAIVPSKASIAVWS  278 (311)
Q Consensus       246 G~fa~~VGlP--aKSGVgGg-----ilavvPg~~gIav~S  278 (311)
                      +..+.--|.|  +|+|-+-.     .++.-| ...++||-
T Consensus       302 ~~~~~~~~~~vAGKTGTt~~~~DaWFvGytp-~~~~~Vwv  340 (453)
T d2bg1a1         302 SLNPTLANADWIGKTGTTNQDENMWLMLSTP-RLTLGGWI  340 (453)
T ss_dssp             HHCHHHHTSCCEEEEECCTTCSEEEEEEECS-SEEEEEEE
T ss_pred             CCCCCCCCCCCCCCCCCCCCCEEEEEEECCC-CEEEEEEE
T ss_conf             4455557876202432788870458996279-85799999


SCOP domain information

class: Multi-domain proteins (alpha and beta)
fold: beta-lactamase/transpeptidase-like
superfamily: beta-lactamase/transpeptidase-like
family: beta-Lactamase/D-ala carboxypeptidase
domain: Penicillin-binding protein 1b, transpeptidase domain
species: Streptococcus pneumoniae [TaxId: 1313]