HHsearch alignment for GI: 254780187 and conserved domain: COG2501
>COG2501 S4-like RNA binding protein [Replication, recombination, and repair].
Probab=96.16 E-value=0.013 Score=37.68 Aligned_cols=51 Identities=24% Similarity=0.363 Sum_probs=46.0
Q ss_pred HHHHHHHHCCCCCHHHHHHHHHCCCEEECCEEEECCCEEECCCCEEEECCH
Q ss_conf 888998621212478878876249787888894135348338847886110
Q gi|254780187|r 96 LDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146 (206)
Q Consensus 96 LD~~v~r~g~a~t~~~Arq~v~hg~i~vng~~v~~ps~~~k~gd~I~~~~k 146 (206)
T Consensus 14 L~qlLK~~g~i~sGG~AK~~i~eg~V~vNGe~EtRRgkKlr~gd~V~i~~~ 64 (73)
T COG2501 14 LGQLLKLAGLIESGGQAKAFIAEGEVKVNGEVETRRGKKLRDGDVVEIPGQ 64 (73)
T ss_pred HHHHHHHHCCCCCCHHHHHHHHCCEEEECCEEECCCCCEEECCCEEEECCE
T ss_conf 999998749505747888998779189888663016776016989998997