HHsearch alignment for GI: 254780187 and conserved domain: PRK10839

>PRK10839 16S rRNA pseudouridylate synthase A; Provisional.
Probab=98.18  E-value=3.3e-06  Score=60.98  Aligned_cols=53  Identities=17%  Similarity=0.180  Sum_probs=49.6

Q ss_pred             HHHHHHHHHHCCCCCHHHHHHHHHCCCEEECCEEEECCCEEECCCCEEEECCHH
Q ss_conf             888889986212124788788762497878888941353483388478861100
Q gi|254780187|r   94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS  147 (206)
Q Consensus        94 ~RLD~~v~r~g~a~t~~~Arq~v~hg~i~vng~~v~~ps~~~k~gd~I~~~~ks  147 (206)
T Consensus         1 mRL~K~La~~g~~-SRR~ae~lI~~GrV~VNg~~v~~~~~~V~~~~~v~vdg~~   53 (231)
T PRK10839          1 MRLDKFIAQQLGV-SRAIAGREIRGNRVTVDGEIVKNAAFKLLPEHDVAYDGNP   53 (231)
T ss_pred             CCHHHHHHHCCCC-CHHHHHHHHHCCEEEECCEEECCCCEECCCCCEEEECCCE
T ss_conf             9378999887895-6999999998797999999914588084999869991958