HHsearch alignment for GI: 254780187 and conserved domain: PRK10839
>PRK10839 16S rRNA pseudouridylate synthase A; Provisional.
Probab=98.18 E-value=3.3e-06 Score=60.98 Aligned_cols=53 Identities=17% Similarity=0.180 Sum_probs=49.6
Q ss_pred HHHHHHHHHHCCCCCHHHHHHHHHCCCEEECCEEEECCCEEECCCCEEEECCHH
Q ss_conf 888889986212124788788762497878888941353483388478861100
Q gi|254780187|r 94 SRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS 147 (206)
Q Consensus 94 ~RLD~~v~r~g~a~t~~~Arq~v~hg~i~vng~~v~~ps~~~k~gd~I~~~~ks 147 (206)
T Consensus 1 mRL~K~La~~g~~-SRR~ae~lI~~GrV~VNg~~v~~~~~~V~~~~~v~vdg~~ 53 (231)
T PRK10839 1 MRLDKFIAQQLGV-SRAIAGREIRGNRVTVDGEIVKNAAFKLLPEHDVAYDGNP 53 (231)
T ss_pred CCHHHHHHHCCCC-CHHHHHHHHHCCEEEECCEEECCCCEECCCCCEEEECCCE
T ss_conf 9378999887895-6999999998797999999914588084999869991958