HHsearch alignment of GI: 254780187 and MMDB domain: 1dm9_A_
>1dm9_A (A:) Hypothetical 15.5 KD protein in MRCA-PCKA intergenic region; heat shock proteins, protein-RNA interactions, ribosome, structural genomics; 2.00A {Escherichia coli}
Probab=98.83 E-value=3e-09 Score=80.24 Aligned_cols=54 Identities=26% Similarity=0.349 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEECCEEEECCCEEECCCCEEEECCH
Q ss_conf 9988888998621212478878876249787888894135348338847886110
Q gi|254780187|r 92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQK 146 (206)
Q Consensus 92 LE~RLD~~v~r~g~a~t~~~Arq~v~hg~i~vng~~v~~ps~~~k~gd~I~~~~k 146 (206)
.++|||.+|.++||+.|+.+|+++|.||+|.|||++++ ||+.+++||.|++...
T Consensus 7 ~g~RLDk~L~~~~~~~sR~~a~~li~~G~V~VNG~~~~-~s~~v~~gD~i~i~~~ 60 (133)
T 1dm9_A 7 VEVRLDKWLWAARFYKTRALAREMIEGGKVHYNGQRSK-PSKIVELNATLTLRQG 60 (133)
T ss_dssp TCCBHHHHHHHTTSSSSHHHHHHHHHTTCEEETTEECC-TTCBCCTTCEEEEEET
T ss_pred CCEEHHHHHHHCCCCCCHHHHHHHHHCCEEEECCEECC-CCCEECCCCEEEEEEC
T ss_conf 64629999987867168999999998691888999734-5856159998999879