HHsearch alignment of GI: 254780187 and MMDB domain: 1v9f_A_
>1v9f_A (A:) Ribosomal large subunit pseudouridine synthase D; RNA binding, lyase; 1.70A {Escherichia coli}
Probab=95.53 E-value=0.0026 Score=41.77 Aligned_cols=55 Identities=18% Similarity=0.234 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEECCEEEECCCEEECCCCEEEECC
Q ss_conf 9998888899862121247887887624978788889413534833884788611
Q gi|254780187|r 91 FLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQ 145 (206)
Q Consensus 91 ~LE~RLD~~v~r~g~a~t~~~Arq~v~hg~i~vng~~v~~ps~~~k~gd~I~~~~ 145 (206)
.-.+|||.++.+.+...|+..+.+++..|.|.|||++++.|.+.+..++++.+..
T Consensus 14 ~~g~rl~~~L~~~~~~~sr~~~~~~i~~G~V~vng~~~~~~~~~~~~~~~~~~~~ 68 (325)
T 1v9f_A 14 QLGQRLDQALAEMFPDYSRSRIKEWILDQRVLVNGKVCDKPKEKVLGGEQVAINA 68 (325)
T ss_dssp -------------------------------------------------------
T ss_pred CCCCHHHHHHHHHCCCCCHHHHHHHHHCCCEEECCEECCCCCEECCCCCEEEECC
T ss_conf 4886699999986686799999999986998999999178320625898997325