HHsearch alignment of GI: 254780187 and MMDB domain: 2cqj_A_
>2cqj_A (A:) BRMS2, U3 small nucleolar ribonucleoprotein protein IMP3 homolog; S4 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.72 E-value=2.7e-19 Score=145.48 Aligned_cols=64 Identities=22% Similarity=0.228 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEECCEEEECCCEEECCC--CEEEECCHHHHH
Q ss_conf 6899999888889986212124788788762497878888941353483388--478861100226
Q gi|254780187|r 87 NLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG--DVIEVKQKSKQL 150 (206)
Q Consensus 87 ~ll~~LE~RLD~~v~r~g~a~t~~~Arq~v~hg~i~vng~~v~~ps~~~k~g--d~I~~~~ksk~~ 150 (206)
|++.+||+|||++|||+|||+|+.+|||+|.||||+|||++|++|||+|++| |.|+++++++..
T Consensus 1 ~~~~~lerRLd~~l~~~g~a~s~~~Ar~lI~~G~V~Vng~~v~~Ps~~v~~~~~d~I~~~~~~k~~ 66 (71)
T 2cqj_A 1 GSSGSSGRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAFLVTRSMEDFVTWVDSSKIS 66 (71)
T ss_dssp CCSSCCEEEHHHHHHHTTCSSSHHHHHHHHHTTCEEETTBCCCCTTCEEEHHHHTTEEESCCSSSC
T ss_pred CCHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHCEEEECCEEECCCCEEECCCCCCEEEEECCCCCC
T ss_conf 910344412689999805527899999999849899899995569858358998869984688678