HHsearch alignment of GI: 254780187 and MMDB domain: 2vqe_D_1-99_194-209
>2vqe_D (D:1-99,D:194-209) 30S ribosomal protein S4; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus}
Probab=100.00 E-value=6.5e-34 Score=240.26 Aligned_cols=94 Identities=38% Similarity=0.705 Sum_probs=89.8
Q ss_pred CCCCCCCEEEEEEECCCCCCCCC------CCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
Q ss_conf 97644871235200588888888------770001368998776544334135899999988485551565479999999
Q gi|254780187|r 1 MSKRESSKHKIDRRIGENLWGRP------KSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIF 74 (206)
Q Consensus 1 M~r~~gpk~K~~RrlG~~l~~~~------k~~~~~r~~~pGqhg~~r~~k~S~yg~qL~eKQKlr~~YG~~~ekq~~~~~ 74 (206)
||||+||++|+|||||++||++. |+++++|+++|||||+++++|.|+||+||+||||+||+|| |+|+||++||
T Consensus 1 MaRy~GPr~Ki~RRlG~~l~~~~k~~~~~K~~~~rr~~~PGqHG~~~r~K~SeYg~qL~EKQKlk~~YG-i~EkQfr~y~ 79 (115)
T 2vqe_D 1 MGRYIGPVCRLCRREGVKLYLKGERCYSPKCAMERRPYPPGQHGQKRARRPSDYAVRLREKQKLRRIYG-ISERQFRNLF 79 (115)
T ss_dssp -CCCCSCCHHHHHHHSSCCCTTSTTSSSTTCSGGGCCSCSSTTTTSCCCCCCHHHHHHHHHHHHHHHHT-CCHHHHHHHH
T ss_pred CCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC-CCCHHHHHHH
T ss_conf 986557686763017998677785667877510147799986767678764378999999999999638-6848999999
Q ss_pred HHHHHCCCCCCHHHHHHHHHH
Q ss_conf 875303344302689999988
Q gi|254780187|r 75 KEADRSRGDTSHNLISFLESR 95 (206)
Q Consensus 75 ~~A~~~~g~t~~~ll~~LE~R 95 (206)
.+|.+++|+||+|||++||+-
T Consensus 80 ~~A~k~kG~TGenLL~LLES~ 100 (115)
T 2vqe_D 80 EEASKKKGVTGSVFLGLLESL 100 (115)
T ss_dssp HHHHHSSSCHHHHHHHHHHTC
T ss_pred HHHHHCCCCCHHHHHHHHHHC
T ss_conf 999853798358899999997