HHsearch alignment of GI: 254780187 and MMDB domain: 3kbg_A_1-81

>3kbg_A (A:1-81) 30S ribosomal protein S4E; RPS4E, RS4E_theac, TAR28, NESG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.75A {Thermoplasma acidophilum}

Probab=96.84  E-value=0.0015  Score=43.24  Aligned_cols=46  Identities=24%  Similarity=0.277  Sum_probs=43.1

Q ss_pred             HHCCCCCHHHHHHHHHCCCEEECCEEEECCCEEECCCCEEEECCHH
Q ss_conf             6212124788788762497878888941353483388478861100
Q gi|254780187|r  102 RAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKS  147 (206)
Q Consensus       102 r~g~a~t~~~Arq~v~hg~i~vng~~v~~ps~~~k~gd~I~~~~ks  147 (206)
                      ++++|.|..+|+.++..|.|.|||+..+-+.|.+-.-|+|++....
T Consensus        17 ~Lk~A~t~rEak~Il~~~~V~VDGkvr~D~~~pvG~mDVIsi~~e~   62 (81)
T 3kbg_A           17 YLKLSDKEREAARILANGLVKVDGKTVREKKFAVGFXDVIEINGES   62 (81)
T ss_dssp             HHHTTTCGGGHHHHHHTTCEEETTEECCCTTCEECTTCEEEETTEE
T ss_pred             HHCCCCCHHHHHHHHHCCEEEECCEEECCCCCCCCEEEEEEECCCE
T ss_conf             6452265899999986793898999962389988706799979977