HHsearch results for GI: 254780187 and protein with PDBid: 2cqj_A

>2cqj_A BRMS2, U3 small nucleolar ribonucleoprotein protein IMP3 homolog; S4 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.69  E-value=3.4e-18  Score=137.28  Aligned_cols=59  Identities=24%  Similarity=0.281  Sum_probs=56.0

Q ss_pred             HHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEECCEEEECCCEEECCC--CEEEECCHHHHH
Q ss_conf             99888889986212124788788762497878888941353483388--478861100226
Q gi|254780187|r   92 LESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEG--DVIEVKQKSKQL  150 (206)
Q Consensus        92 LE~RLD~~v~r~g~a~t~~~Arq~v~hg~i~vng~~v~~ps~~~k~g--d~I~~~~ksk~~  150 (206)
                      -++|||++|||+|||.|+.+|||||.||||+|||++|++|||+|+.+  |.|++.++|+..
T Consensus         6 ~~RRLd~il~r~~fa~S~~~ARqlI~HghI~Vng~~V~~Ps~lV~~~~Ed~It~~~~Ski~   66 (71)
T 2cqj_A            6 SGRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAFLVTRSMEDFVTWVDSSKIS   66 (71)
T ss_dssp             CEEEHHHHHHHTTCSSSHHHHHHHHHTTCEEETTBCCCCTTCEEEHHHHTTEEESCCSSSC
T ss_pred             HHCCHHHHHHHHCCCCCHHHHHHHHHCCEEEECCEEECCCCEEECCCCCCEEEEECCCCCC
T ss_conf             2301378998826537899999997669599999996579769538988769996788677