HHsearch results for GI: 254780187 and protein with PDBid: 3bbn_D
>3bbn_D Ribosomal protein S4; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=100.00 E-value=0 Score=500.08 Aligned_cols=198 Identities=36% Similarity=0.543 Sum_probs=185.7
Q ss_pred CCCCCCCEEEEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC
Q ss_conf 97644871235200588888888770001368998776544334135899999988485551565479999999875303
Q gi|254780187|r 1 MSKRESSKHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRS 80 (206)
Q Consensus 1 M~r~~gpk~K~~RrlG~~l~~~~k~~~~~r~~~pGqhg~~r~~k~S~yg~qL~eKQKlr~~YG~~~ekq~~~~~~~A~~~ 80 (206)
||||+||++|+|||||+++|.+.+. .+.+|++|++.+++|.|+||+||+||||+||+|| ++|+||++||++|.++
T Consensus 1 MaRy~GPk~Ki~RRlG~~~~~~~k~----~~~~~~~~~~~r~~k~S~Yg~qL~eKQKlr~~YG-i~EkQf~~~~~~a~~~ 75 (201)
T 3bbn_D 1 MSRYRGPRFKKIRRLGALPGLTNKR----PRAGSDLRNQSRSGKRSQYRIRLEEKQKLRFHYG-ITERQLLKYVRIARKA 75 (201)
T ss_dssp CCSCCSCCTTSSSSSSSCCCSSSCC----CSCCSSSCSSSCCCCCCTTHHHHTTHHHHHHHHT-CCHHHHHHHHHHHHHS
T ss_pred CCCCCCCHHHHHCCCCCCCCCCCCC----CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHC
T ss_conf 9977676856620589884666777----7899987888788654489999999999999839-9789999999999855
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEECCEEEECCCEEECCCCEEEECCHHHHHHHHHHHHHHC
Q ss_conf 34430268999998888899862121247887887624978788889413534833884788611002269999877521
Q gi|254780187|r 81 RGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLA 160 (206)
Q Consensus 81 ~g~t~~~ll~~LE~RLD~~v~r~g~a~t~~~Arq~v~hg~i~vng~~v~~ps~~~k~gd~I~~~~ksk~~~~i~~~~~~~ 160 (206)
+|+||++|+++||+||||||||+|||+|+++|||||+||||+|||++||||||.|++||+|+++|++++...+.++.+..
T Consensus 76 ~g~tg~~ll~lLE~RLDnvvyR~gfa~t~~~ARQlV~Hghi~VNgk~v~ipSy~vk~GD~I~v~eks~~~~~i~~~~~~~ 155 (201)
T 3bbn_D 76 KGSTGQVLLQLLEMRLDNILFRLGMAPTIPGARQLVNHRHILVNGRIVDIPSYRCKPQDTIMARDEQKSIALIQNSLDLS 155 (201)
T ss_dssp SSCTTTTTTHHHHSBTTTTTTTTTSSSSSHHHHHHHHTTCEEETTEECCCTTCBCCTTEEEEECSSTTSCHHHHHHSSST
T ss_pred CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCEEECCCEEECCEEECCCCEECCCCCEEEECHHHCCHHHHHHHHHHC
T ss_conf 99779999999998767887505521577761304732784877989779987827999899732221469999999850
Q ss_pred -CCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECC
Q ss_conf -6899962788124318999967884211246753466316775049
Q gi|254780187|r 161 -ERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 (206)
Q Consensus 161 -~~~~P~wLevd~~~l~g~v~~~P~r~e~i~~p~~ine~LVVEyYSR 206 (206)
...+|+||++|.++++|++++.|++ +| +|+.+||+||||||||
T Consensus 156 ~~~~~p~wl~~d~~~~~g~v~~~P~r-~~--i~~~i~e~lVVEyYSr 199 (201)
T 3bbn_D 156 PREELPKHLTLNPFPYKGLVNQIIDS-KW--VGLKINELLVVEYYSR 199 (201)
T ss_dssp TTSCCCTTEEEETTTTEEEECSCCCG-GG--CCCSCCHHHHTTTSCC
T ss_pred CCCCCCCEEEEECCCCEEEEECCCCH-HH--CCCCCCCCEEEEECCC
T ss_conf 54899986998744589999617865-44--8999874479997577